RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATXN1L (Homo sapiens)

Ensembl gene IDs: ENSG00000224470

Ensembl transcript IDs: ENST00000427980.7, ENST00000565676.1, ENST00000569119.1, ENST00000683775.1

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCCCAGGTCACGACACCATGCAGCGGTCAGCGCAGCAGGAGGGTaGGGGTGGCGCAGGCACTTGGGCACAACACAGACAAAGGTGGGG +
Preference number: 1 (lower is better)
Translates to: RPRSRHHAAVSAAGG*GWRRHLGTTQTKVG
Trigger: CCCCACCTTTGTCTGTGTTGTGCCCAAGTGCCTGCGCCACCCCCACCCTCCTGCTGCGCTGACCGCTGCATGGTGTCGTGACCTGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp TCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTaGCTGCTCACGGCGGCGAGGCGAGGCTCTGGGGTAAAGCCCCAG +
Preference number: 1 (lower is better)
Translates to: SLPRKPFPARRVQIL*LLTAARRGSGVKPQ
Trigger: CTGGGGCTTTACCCCAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp TCCCCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTaGAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGGGG +
Preference number: 1 (lower is better)
Translates to: SPKSHCQESHSLLGV*KSSACSRRRGEALG
Trigger: CCCCAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp AGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATaGAGCGGTCAGCGCAGCAGGAGGGTGGGGGTGGCGCAGGCACTT +
Preference number: 1 (lower is better)
Translates to: RKGSAATNEAQVTTP*SGQRSRRVGVAQAL
Trigger: AAGTGCCTGCGCCACCCCCACCCTCCTGCTGCGCTGACCGCTGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp TGCCTCCCCTTTCCCCCAAATCTCACTGCCAAGAAAGCCATTCCCTaGTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCG +
Preference number: 1 (lower is better)
Translates to: CLPFPPNLTAKKAIP*SACANPLPAHGGEA
Trigger: CGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGGGGAAAGGGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 90 bp AGACATGGAAGGATAGGGAGCTGTAGAGGACAGCAGGCAGGACAGTaGGCGGACAGCAGCAGTGGCAAAGCAGCGCAGGGCAAAGCCCTT +
Preference number: 1 (lower is better)
Translates to: RHGRIGSCRGQQAGQ*ADSSSGKAAQGKAL
Trigger: AAGGGCTTTGCCCTGCGCTGCTTTGCCACTGCTGCTGTCCGCTCACTGTCCTGCCTGCTGTCCTCTACAGCTCCCTATCCTTCCATGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp AGTGGCAAAGCAGCGCAGGGCAAAGCCCTTGGTGTTATGACCAACTaGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCC +
Preference number: 1 (lower is better)
Translates to: SGKAAQGKALGVMTN*DQEYRRTSPDWLGA
Trigger: GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCATAACACCAAGGGCTTTGCCCTGCGCTGCTTTGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 90 bp ATGGGGAAGGGCTATGAAGCAGAGGATCAAGCAGAGTCCTGCAGATaGGAGTGCTCCTCCCCCACACACCCAGCCATAGACATCTGGAAC +
Preference number: 1 (lower is better)
Translates to: MGKGYEAEDQAESCR*ECSSPTHPAIDIWN
Trigger: GTTCCAGATGTCTATGGCTGGGTGTGTGGGGGAGGAGCACTCTCATCTGCAGGACTCTGCTTGATCCTCTGCTTCATAGCCCTTCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 90 bp GACAAAACCAACTTTGCAGACAAGGAAAGGCAGTGCAGCTACAAATaGGGCCCAGGTCACGACACCATGCAGCGGTCAGCGCAGCAGGAG +
Preference number: 1 (lower is better)
Translates to: DKTNFADKERQCSYK*GPGHDTMQRSAQQE
Trigger: CTCCTGCTGCGCTGACCGCTGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCTGCAAAGTTGGTTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp TTAGAGCTGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTaGGAGAAGCAGTGGAATAAGACAGGAGGGGCATATGGGACATGT +
Preference number: 1 (lower is better)
Translates to: LELVVGGDGLEAPEC*EKQWNKTGGAYGTC
Trigger: ACATGTCCCATATGCCCCTCCTGTCTTATTCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCAGCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 90 bp TTTCAAAGTGGGTCTGGCATGCTGAGATGGAGGAGCTTTGTTAGGTaGGCTACCTTTCCAGAGGGCCTGCCTAGAACCCAGTCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: FQSGSGMLRWRSFVR*ATFPEGLPRTQSAW
Trigger: CCAGGCTGACTGGGTTCTAGGCAGGCCCTCTGGAAAGGTAGCTCACCTAACAAAGCTCCTCCATCTCAGCATGCCAGACCCACTTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 90 bp ACAGCAGCAGTGGCAAAGCAGCGCAGGGCAAAGCCCTTGGTGTTATaGCCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGC +
Preference number: 1 (lower is better)
Translates to: TAAVAKQRRAKPLVL*PTGTKNIEGPAQIG
Trigger: GCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCATAACACCAAGGGCTTTGCCCTGCGCTGCTTTGCCACTGCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp GCTCCCCATCACAACACCCTCTGGGGTTGTCCTGAAAGGATGCCATaGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATG +
Preference number: 1 (lower is better)
Translates to: APHHNTLWGCPERMP*GNEQQILPWEADFM
Trigger: CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCTTTCAGGACAACCCCAGAGGGTGTTGTGATGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp TTTGGCAGGTGGGGAGGAAGTGAAAGAGCCAGAGGTCACGAGACTTaGCGAAAGTCCTTGACAGAGCAGAGATCAGACCTCAGAGGTTTG +
Preference number: 1 (lower is better)
Translates to: FGRWGGSERARGHET*RKSLTEQRSDLRGL
Trigger: CAAACCTCTGAGGTCTGATCTCTGCTCTGTCAAGGACTTTCGGCAAGTCTCGTGACCTCTGGCTCTTTCACTTCCTCCCCACCTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp TACAGCGCCAGACAGTCAGCAGTCCTCCTTTCTATTCCTAAGAGCTaGAAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTC +
Preference number: 1 (lower is better)
Translates to: YSARQSAVLLSIPKS*KCPTADKGQALALV
Trigger: GACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTTCCAGCTCTTAGGAATAGAAAGGAGGACTGCTGACTGTCTGGCGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp GTTATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTaGCTGGGGGCCCTCCCTCAGGTACAAGTACTCAGCTCTGAACTC +
Preference number: 1 (lower is better)
Translates to: VMTNWDQEYRRTSPD*LGALPQVQVLSSEL
Trigger: GAGTTCAGAGCTGAGTACTTGTACCTGAGGGAGGGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCATAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 90 bp ACGGTCAGGTCAGCAACCTCCTTTGATGGACCCCCAAAAGCTGACTaGCCAGGCAAACTGCTTTCAAGGAATGAAAGAGTGGAGGGTAGG +
Preference number: 1 (lower is better)
Translates to: TVRSATSFDGPPKAD*PGKLLSRNERVEGR
Trigger: CCTACCCTCCACTCTTTCATTCCTTGAAAGCAGTTTGCCTGGTCAGTCAGCTTTTGGGGGTCCATCAAAGGAGGTTGCTGACCTGACCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp CCCTTCATCTCCAGCGTGATCACTCAACTCTTCAACATGCCTGCTTaGTGCAGGTTTAAACCACACCACCATCCTGTGCTTCCCCCTAAA +
Preference number: 1 (lower is better)
Translates to: PFISSVITQLFNMPA*CRFKPHHHPVLPPK
Trigger: TTTAGGGGGAAGCACAGGATGGTGGTGTGGTTTAAACCTGCAGCAAGCAGGCATGTTGAAGAGTTGAGTGATCACGCTGGAGATGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp AAATCACCCTTTAAAGTGCGCATCTCTCACAAGAAGGGTTCTGGGTaGGAACCCTCTTATTTCCAACCTTGGGGCCTCCTGCCCTTCTAC +
Preference number: 1 (lower is better)
Translates to: KSPFKVRISHKKGSG*EPSYFQPWGLLPFY
Trigger: GTAGAAGGGCAGGAGGCCCCAAGGTTGGAAATAAGAGGGTTCCCACCCAGAACCCTTCTTGTGAGAGATGCGCACTTTAAAGGGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp CAACCTCCTTTGATGGACCCCCAAAAGCTGACTGACCAGGCAAACTaGTTTCAAGGAATGAAAGAGTGGAGGGTAGGGCTTGTAGCAAAC +
Preference number: 1 (lower is better)
Translates to: QPPLMDPQKLTDQAN*FQGMKEWRVGLVAN
Trigger: GTTTGCTACAAGCCCTACCCTCCACTCTTTCATTCCTTGAAAGCAGTTTGCCTGGTCAGTCAGCTTTTGGGGGTCCATCAAAGGAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp TTCATCTCCAGCGTGATCACTCAACTCTTCAACATGCCTGCTTGCTaGAGGTTTAAACCACACCACCATCCTGTGCTTCCCCCTAAATCG +
Preference number: 1 (lower is better)
Translates to: FISSVITQLFNMPAC*RFKPHHHPVLPPKS
Trigger: CGATTTAGGGGGAAGCACAGGATGGTGGTGTGGTTTAAACCTGCAGCAAGCAGGCATGTTGAAGAGTTGAGTGATCACGCTGGAGATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 90 bp AGGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTaGTCACTCAACTCTTCAACATGCCTGCTTGCTGCAGGTTTAAAC +
Preference number: 1 (lower is better)
Translates to: RPFPSQSMSNPSSPA*SLNSSTCLLAAGLN
Trigger: GTTTAAACCTGCAGCAAGCAGGCATGTTGAAGAGTTGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp CAAAAGCTGACTGACCAGGCAAACTGCTTTCAAGGAATGAAAGAGTaGAGGGTAGGGCTTGTAGCAAACAAGCCAGTTTCAGTCACTCTG +
Preference number: 1 (lower is better)
Translates to: QKLTDQANCFQGMKE*RVGLVANKPVSVTL
Trigger: CAGAGTGACTGAAACTGGCTTGTTTGCTACAAGCCCTACCCTCCACTCTTTCATTCCTTGAAAGCAGTTTGCCTGGTCAGTCAGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp CCCAACTTGCCAGGGTCCTCAAGAATTTCTCTTTCCAGAATTCAGTaGAAGTTACCAGGTTGGAAAGTCACAAGTAGCCCAAGTGGAAGG +
Preference number: 1 (lower is better)
Translates to: PNLPGSSRISLSRIQ*KLPGWKVTSSPSGR
Trigger: CCTTCCACTTGGGCTACTTGTGACTTTCCAACCTGGTAACTTCCACTGAATTCTGGAAAGAGAAATTCTTGAGGACCCTGGCAAGTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp AACTTCCCATGGCCAATTCAATCGACTAGGTTATCTTTACTCCAATaGACCCAGGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATC +
Preference number: 1 (lower is better)
Translates to: NFPWPIQSTRLSLLQ*TQAFSQSIHVQPFI
Trigger: GATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCCTGGGTCCATTGGAGTAAAGATAACCTAGTCGATTGAATTGGCCATGGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp TATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTaGTTCACCAGCAAGAGACAGCAACAGAAAGGTCAGGGCCCAACT +
Preference number: 1 (lower is better)
Translates to: YMHGTILWYYRNCWY*FTSKRQQQKGQGPT
Trigger: AGTTGGGCCCTGACCTTTCTGTTGCTGTCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp CTTGGCTTATTATCCATCCATGACTGGGTTCCCCTATTCCCAAATTaGTATACACATTTTTATACAGCGCCAGACAGTCAGCAGTCCTCC +
Preference number: 1 (lower is better)
Translates to: LGLLSIHDWVPLFPN*YTHFYTAPDSQQSS
Trigger: GGAGGACTGCTGACTGTCTGGCGCTGTATAAAAATGTGTATACCAATTTGGGAATAGGGGAACCCAGTCATGGATGGATAATAAGCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp ATGTTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTaGTATTGCTTCACCAGCAAGAGACAGCAACAGAAAGGTCAGGGC +
Preference number: 1 (lower is better)
Translates to: MLYMHGTILWYYRNC*YCFTSKRQQQKGQG
Trigger: GCCCTGACCTTTCTGTTGCTGTCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp GTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGTaGTTTAGTAAACTTAGCCTAGGAGGCCAAGATGTCTCCCTAAAA +
Preference number: 1 (lower is better)
Translates to: VVYTFAHLEGTIASV*FSKLSLGGQDVSLK
Trigger: TTTTAGGGAGACATCTTGGCCTCCTAGGCTAAGTTTACTAAACCACACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp GCTCTCATGTCTCCTGCAAACTCAGGAAATTCCTATAAGGAAGAATaGACACACCACAGGTTAGTCATATTTTTCATGCCTGGAGGAAAA +
Preference number: 1 (lower is better)
Translates to: ALMSPANSGNSYKEE*THHRLVIFFMPGGK
Trigger: TTTTCCTCCAGGCATGAAAAATATGACTAACCTGTGGTGTGTCCATTCTTCCTTATAGGAATTTCCTGAGTTTGCAGGAGACATGAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 90 bp AATATGTTATATATGCATGGAACGATATTGTGGTATTACAGGAACTaGTGGTATTGCTTCACCAGCAAGAGACAGCAACAGAAAGGTCAG +
Preference number: 1 (lower is better)
Translates to: NMLYMHGTILWYYRN*WYCFTSKRQQQKGQ
Trigger: CTGACCTTTCTGTTGCTGTCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAACATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp CTTGATAGGAATGATTCAAGACTTGGCTTATTATCCATCCATGACTaGGTTCCCCTATTCCCAAATTGGTATACACATTTTTATACAGCG +
Preference number: 1 (lower is better)
Translates to: LDRNDSRLGLLSIHD*VPLFPNWYTHFYTA
Trigger: CGCTGTATAAAAATGTGTATACCAATTTGGGAATAGGGGAACCCAGTCATGGATGGATAATAAGCCAAGTCTTGAATCATTCCTATCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 90 bp AAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTAACTaGAGAACTAATAAAGAAACCTTTAGTGTGAAAAGTGCATTTATG +
Preference number: 1 (lower is better)
Translates to: KTLSSQSTREGSRFN*RTNKETFSVKSAFM
Trigger: CATAAATGCACTTTTCACACTAAAGGTTTCTTTATTAGTTCTCCAGTTAAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCGCAGAGTCCTGCAGATaGGAGTGCTCCTCCCCCACA +
Preference number: 2 (lower is better)
Translates to: FTLNPEGALPPGPRAARSAESCR*ECSSPT
Trigger: TGTGGGGGAGGAGCACTCTCATCTGCAGGACTCTGC...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGACTTCACTCTGAACCCTaGAGGGGCTCTCCCTCCGGG +
Preference number: 2 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGLHSEP*RGSPSG
Trigger: CCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAAG...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGACGTGTGCAAATCCTCTaGCTGCTCACGGCGGCGAGG +
Preference number: 2 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGRVQIL*LLTAAR
Trigger: CCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACG...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGATCCTTGCCCCAGGCCTaGTGCTCCCCATCACAACAC +
Preference number: 2 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGSLPQA*CSPSQH
Trigger: GTGTTGTGATGGGGAGCAGCAGGCCTGGGGCAAGGA...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 90 bp CTGCCCAGCCACGCATTCGCCCTGGCCCAGGGCATAGTTCCCTTCTaGTTTCTTCACCAAGCTGTTTGGCAGTGGAAGTGGAGGGGACAT +
Preference number: 2 (lower is better)
Translates to: LPSHAFALAQGIVPF*FLHQAVWQWKWRGH
Trigger: ATGTCCCCTCCACTTCCACTGCCAAACAGCTTGGTGAAGAAACAAGAAGGGAACTATGCCCTGGGCCAGGGCGAATGCGTGGCTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCTGGGAGGGGATGGCTTaGAGGCACCAGAATGCTGGG +
Preference number: 2 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAWEGMA*RHQNAG
Trigger: CCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCA...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCTCCCTGCTCGGCGTGTaGAAATCCTCTGCCTGCTCA +
Preference number: 2 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGASLLGV*KSSACS
Trigger: TGAGCAGGCAGAGGATTTGCACACGCCGAGCAGGGA...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCCCTTTCCAGAGGGCCTaGCTAGAACCCAGTCAGCCT +
Preference number: 2 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAPFQRA*LEPSQP
Trigger: AGGCTGACTGGGTTCTAGGCAGGCCCTCTGGAAAGG...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTGATGGGGAAGGGCTATaGAGCAGAGGATCAAGCAGA +
Preference number: 2 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSDGEGL*SRGSSR
Trigger: TCTGCTTGATCCTCTGCTTCATAGCCCTTCCCCATC...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGAATTTCAAAGTGGGTCTaGCATGCTGAGATGGAGGAG +
Preference number: 2 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGISKWV*HAEMEE
Trigger: CTCCTCCATCTCAGCATGCCAGACCCACTTTGAAAT...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTGCGTGGACAATACCCTaGGTTGCCTTCAAGAGTCTA +
Preference number: 2 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSAWTIP*VAFKSL
Trigger: TAGACTCTTGAAGGCAACTCAGGGTATTGTCCACGC...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCCTTGCCGAAAGTCCTTaGCAGAGCAGAGATCAGACC +
Preference number: 2 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGALAESP*QSRDQT
Trigger: GGTCTGATCTCTGCTCTGTCAAGGACTTTCGGCAAG...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCAGGTGGCGCAGGCACTTaGGCACAACACAGACAAAGG +
Preference number: 2 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSGGAGT*AQHRQR
Trigger: CCTTTGTCTGTGTTGTGCCCAAGTGCCTGCGCCACC...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCACATGTGAAAATGCCATaGTGGGCACTGCCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSHVKMP*WALPSH
Trigger: GTGGCTGGGCAGTGCCCATCATGGCATTTTCACATG...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGCAGGTCACGACACCATaGAGCGGTCAGCGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLQVTTP*SGQRSR
Trigger: CCTGCTGCGCTGACCGCTGCATGGTGTCGTGACCTG...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCTCCCCATTTGGCAGGTaGGGAGGAAGTGAAAGAGCC +
Preference number: 2 (lower is better)
Translates to: KCPTADKGQALALVNCSFSPFGR*GGSERA
Trigger: GGCTCTTTCACTTCCTCCCCACCTGCCAAATGGGGA...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCCCTGCCTTGGGAGGCTaGCTTCATGCCTCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: PLVETCLFLPQDSQTFGAPALGG*LHASPF
Trigger: GAAAGGGGAGGCATGAAGTCAGCCTCCCAAGGCAGG...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTACCAGCAAGATTCTGTaGGATTTCAAAGTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSTSKIL*DFKVGL
Trigger: CAGACCCACTTTGAAATCTCACAGAATCTTGCTGGT...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCCCCCCAAAAGCTGACTaGCCAGGCAAACTGCTTTCA +
Preference number: 2 (lower is better)
Translates to: KCPTADKGQALALVNCSFPPKAD*PGKLLS
Trigger: TGAAAGCAGTTTGCCTGGTCAGTCAGCTTTTGGGGG...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGATGCAAATCCTCTGCCTaGTCACGGCGGCGAGGCGAG +
Preference number: 2 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRCKSSA*SRRRGE
Trigger: CTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCA...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTTGCCATGATGGGCACTaGCCAGCCACGCATTCGCCC +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFCHDGH*PATHSP
Trigger: GGGCGAATGCGTGGCTGGGCAGTGCCCATCATGGCA...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCAGAACAGGGAGGCCCTaGTTTTGGAATGTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGARTGRP*FWNVSS
Trigger: AGAAGAAACATTCCAAAATCAGGGCCTCCCTGTTCT...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGCAGTGCAGCTACAAATaGGGCCCAGGTCACGACACC +
Preference number: 2 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLQCSYK*GPGHDT
Trigger: GGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTG...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCATGGAACCCCACGGTCTaGGCTGATGCTAAAAGTTGT +
Preference number: 2 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSWNPTV*ADAKSC
Trigger: ACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCA...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCAAGAAAGCCATTCCCTaGTCGGCGTGTGCAAATCCT +
Preference number: 2 (lower is better)
Translates to: KCPTADKGQALALVNCSFKKAIP*SACANP
Trigger: AGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTT...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCGTTGTCCTGAAAGGATaGCATGGGGTAATGAACAAC +
Preference number: 2 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAVVLKG*HGVMNN
Trigger: GTTGTTCATTACCCCATGGCATCCTTTCAGGACAAC...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACTTGCCCCAGGCCTGCTaGTCCCCATCACAACACCCT +
Preference number: 2 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYLPQAC*SPSQHP
Trigger: AGGGTGTTGTGATGGGGAGCAGCAGGCCTGGGGCAA...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCGCAGCATTCAGAGAATaGGGGACAGAGAAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: KCPTADKGQALALVNCSFAAFRE*GTEKGK
Trigger: TTTCCCCTTCTCTGTCCCCCATTCTCTGAATGCTGC...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 90 bp ACAAACCAGATACTGAAGCACTCACGGTCAGGTCAGCAACCTCCTTaGATGGACCCCCAAAAGCTGACTGACCAGGCAAACTGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: TNQILKHSRSGQQPP*MDPQKLTDQANCFQ
Trigger: TTGAAAGCAGTTTGCCTGGTCAGTCAGCTTTTGGGGGTCCATCAAAGGAGGTTGCTGACCTGACCGTGAGTGCTTCAGTATCTGGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCGAGGAAGGACGCTTGTaGGAAACCCATGCAAACAAT +
Preference number: 2 (lower is better)
Translates to: KCPTADKGQALALVNCSFEEGRL*ETHANN
Trigger: ATTGTTTGCATGGGTTTCTCACAAGCGTCCTTCCTC...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGTTGGAGGCACCAGAATaGTGGGAGAAGCAGTGGAAT +
Preference number: 2 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKLEAPE*WEKQWN
Trigger: ATTCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAA...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCAAACATGCCTGCTTGCTaGAGGTTTAAACCACACCAC +
Preference number: 2 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSNMPAC*RFKPHH
Trigger: GTGGTGTGGTTTAAACCTGCAGCAAGCAGGCATGTT...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGCATCACAACACCCTCTaGGGTTGTCCTGAAAGGATG +
Preference number: 2 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKHHNTL*GCPERM
Trigger: CATCCTTTCAGGACAACCCCAGAGGGTGTTGTGATG...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTTCTTATTTCCAACCTTaGGGCCTCCTGCCCTTCTAC +
Preference number: 2 (lower is better)
Translates to: KLASGSDTNQILKHSRSGSYFQP*GLLPFY
Trigger: GTAGAAGGGCAGGAGGCCCCAAGGTTGGAAATAAGA...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCACAGAATCCACCTAACTaGAGCTGGACGAACTTCACT +
Preference number: 2 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSQNPPN*SWTNFT
Trigger: AGTGAAGTTCGTCCAGCTCCAGTTAGGTGGATTCTG...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 90 bp GGGGACAGAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTaGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGG +
Preference number: 2 (lower is better)
Translates to: GDREGERYDPKCSTK*ASGSDTNQILKHSR
Trigger: CCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTCTGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGCCAAAGTCCCCTGACTaGGTCCCTGGCAAGGTAGTA +
Preference number: 2 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLPKSPD*VPGKVV
Trigger: TACTACCTTGCCAGGGACTCAGTCAGGGGACTTTGG...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTGGGAGGCTGACTTCATaGCTCCCCTTTCCCCCAAAT +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFGRLTS*LPFPPN
Trigger: ATTTGGGGGAAAGGGGAGGCATGAAGTCAGCCTCCC...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGATGAACAACAGATCCTaGCTTGGGAGGCTGACTTCA +
Preference number: 2 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKMNNRS*LGRLTS
Trigger: TGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCAT...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGGTTTCTTCTCCTGTGTaGACCCCCTTCCTTCCTTGC +
Preference number: 2 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLVSSPV*TPFLPC
Trigger: GCAAGGAAGGAAGGGGGTGCACACAGGAGAAGAAAC...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGCACACCACCATCCTGTaGTTCCCCCTAAATCGCCCA +
Preference number: 2 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVHTTIL*FPLNRP
Trigger: TGGGCGATTTAGGGGGAAGCACAGGATGGTGGTGTG...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCGGCGAGGCGAGGCTCTaGGGTAAAGCCCCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFGEARL*GKAPVL
Trigger: CAGGACTGGGGCTTTACCCCAGAGCCTCGCCTCGCC...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTCTACCCCAGGAAAGCTaGAGAGTGAAGGCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFLPQES*RVKASQ
Trigger: CTGGGAAGCCTTCACTCTCCAGCTTTCCTGGGGTAG...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp AAACTAGAGGTCTTGGTCAGAGTGGACAAAACCAACTTTGCAGACAAGGAAAGGGTGGGTCTGGCATGCTaGGATGGAGGAGCTTTGTTA +
Preference number: 2 (lower is better)
Translates to: KLEVLVRVDKTNFADKERVGLAC*DGGALL
Trigger: TAACAAAGCTCCTCCATCTCAGCATGCCAGACCCAC...CCTTTCCTTGTCTGCAAAGTTGGTTTTGTCCACTCTGACCAAGACCTCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTTTTACTCCCTCCCTCTaGCATCTGCTCCCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFFTPSL*HLLPKP
Trigger: AGGCTTTGGGAGCAGATGGCAGAGGGAGGGAGTAAA...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCCTCAGCTTGTGTCCTTaGAGACACTGCTTGAGCATC +
Preference number: 2 (lower is better)
Translates to: PLVETCLFLPQDSQTFGALSLCP*RHCLSI
Trigger: GATGCTCAAGCAGTGTCTGCAAGGACACAAGCTGAG...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGCAACAGATCCTGCCTTaGGAGGCTGACTTCATGCCT +
Preference number: 2 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLQQILP*EADFMP
Trigger: AGGCATGAAGTCAGCCTCCCAAGGCAGGATCTGTTG...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGGCCAGGATCATAGCCTaGGAGAAGTCTAACCAGAGA +
Preference number: 2 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLARIIA*EKSNQR
Trigger: TCTCTGGTTAGACTTCTCCCAGGCTATGATCCTGGC...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGACAAGGGACAGGCTCTaGCCCTTGTCAACTGCTCAT +
Preference number: 2 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVTRDRL*PLSTAH
Trigger: ATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGT...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGAACACAAACCAGATACTaGAGCACTCACGGTCAGGTC +
Preference number: 2 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRTQTRY*STHGQV
Trigger: GACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGT...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 90 bp ATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATaGCTTCACCAGCAAGAGACAGCAACAGAAAGGTCAGGGCCCAAC +
Preference number: 2 (lower is better)
Translates to: IYAWNDIVVLQELLV*LHQQETATERSGPN
Trigger: GTTGGGCCCTGACCTTTCTGTTGCTGTCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 90 bp AAAGAGCAACTGACAGCTGCAAAGACCCAGATGCTTATTTTATTATaGCATAATGTGGGAGACCTTCCCTACCCCAGGAAAGCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: KEQLTAAKTQMLILL*HNVGDLPYPRKAGE
Trigger: CTCTCCAGCTTTCCTGGGGTAGGGAAGGTCTCCCACATTATGCAATAATAAAATAAGCATCTGGGTCTTTGCAGCTGTCAGTTGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTCTTATTATCCATCCATaGCTGGGTTCCCCTATTCCC +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFLIIHP*LGSPIP
Trigger: GGGAATAGGGGAACCCAGTCATGGATGGATAATAAG...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTGGGCAAACAGGTTCCTaGTCGACATCCAACCTAATA +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFGQTGS*STSNLI
Trigger: TATTAGGTTGGATGTCGATCAGGAACCTGTTTGCCC...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 90 bp GGAAAGAAGTTAATACAACAGAAGACACCACTAGTAGAAACCTGCTaGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCAGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: GKKLIQQKTPLVETC*FLPQDSQTFGARGL
Trigger: GAGCCCTCTGGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGGTGTCTTCTGTTGTATTAACTTCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCACAACCTTTAGCACCTaGACACTAAGAATGACTCCA +
Preference number: 2 (lower is better)
Translates to: PLVETCLFLPQDSQTFGATTFST*TLRMTP
Trigger: TGGAGTCATTCTTAGTGTTCAGGTGCTAAAGGTTGT...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGTTGGCGTCTGGTTCTaGCACAAACCAGATACTGAA +
Preference number: 2 (lower is better)
Translates to: MERYCGITGTAGIASPARVGVWF*HKPDTE
Trigger: TTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAAC...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCAACCCATGCAAACAATaGACTCTAGGAATGAGTTGC +
Preference number: 2 (lower is better)
Translates to: PLVETCLFLPQDSQTFGANPCKQ*TLGMSC
Trigger: GCAACTCATTCCTAGAGTTCATTGTTTGCATGGGTT...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTTGTCCTTGCAGACACTaGTTGAGCATCTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFCPCRH*LSIYCV
Trigger: TACACAGTAGATGCTCAAGCAGTGTCTGCAAGGACA...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp AAACTAGAGGTCTTGGTCAGAGTGGACAAAACCAACTTTGCAGACAAGGAAAGGTCACAAGAAGGGTTCTaGGTGGGAACCCTCTTATTT +
Preference number: 2 (lower is better)
Translates to: KLEVLVRVDKTNFADKERSQEGF*VGTLLF
Trigger: AAATAAGAGGGTTCCCACCCAGAACCCTTCTTGTGA...CCTTTCCTTGTCTGCAAAGTTGGTTTTGTCCACTCTGACCAAGACCTCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGTGAGATTTCAAAGTaGGTCTGGCATGCTGAGATG +
Preference number: 2 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYCEISK*VWHAEM
Trigger: CATCTCAGCATGCCAGACCCACTTTGAAATCTCACA...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGTGGAAGTTACCAGGTTaGAAAGTCACAAGTAGCCCA +
Preference number: 2 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVWKLPG*KVTSSP
Trigger: TGGGCTACTTGTGACTTTCCAACCTGGTAACTTCCA...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCTTATCCATCCATGACTaGGTTCCCCTATTCCCAAAT +
Preference number: 2 (lower is better)
Translates to: PLVETCLFLPQDSQTFGALSIHD*VPLFPN
Trigger: ATTTGGGAATAGGGGAACCCAGTCATGGATGGATAA...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGTTATCTTTACTCCAATaGACCCAGGCCTTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLLSLLQ*TQAFSQ
Trigger: CTGGGAAAAGGCCTGGGTCCATTGGAGTAAAGATAA...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCAGGAGCTTTGTTAGGTaGGCTACCTTTCCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFRSFVR*ATFPEG
Trigger: GCCCTCTGGAAAGGTAGCTCACCTAACAAAGCTCCT...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTAATAGAGATTATAGCTaGAGGGGAAACCAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFNRDYS*RGNQRD
Trigger: GTCTCTCTGGTTTCCCCTTCAGCTATAATCTCTATT...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGAAATCACCCTTTAAAGTaGGCATCTCTCACAAGAAGG +
Preference number: 2 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRNHPLK*ASLTRR
Trigger: CCTTCTTGTGAGAGATGCGCACTTTAAAGGGTGATT...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGACTGACCAGGCAAACTaGTTTCAAGGAATGAAAGAG +
Preference number: 2 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLTDQAN*FQGMKE
Trigger: CTCTTTCATTCCTTGAAAGCAGTTTGCCTGGTCAGT...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGCTGGCCCTTGTCAACTaGTCATTCTTAAAAAGTTGG +
Preference number: 2 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLLALVN*SFLKSW
Trigger: CCAACTTTTTAAGAATGAGCAGTTGACAAGGGCCAG...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTCCACTAGTAGAAACCTaGTTGTTTCTCCCTCAAGAT +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFPLVET*LFLPQD
Trigger: ATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCGTGGATCATCATTTTTaGCTCTTTCTTTACTCCCTC +
Preference number: 2 (lower is better)
Translates to: PLVETCLFLPQDSQTFGAVDHHF*LFLYSL
Trigger: GAGGGAGTAAAGAAAGAGCCAAAAATGATGATCCAC...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGTCCTATAAGGAAGAATaGACACACCACAGGTTAGTC +
Preference number: 2 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVSYKEE*THHRLV
Trigger: GACTAACCTGTGGTGTGTCCATTCTTCCTTATAGGA...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTTGTAGTGTACACTTTTaGCCATCTGGAAGGTACTAT +
Preference number: 2 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFCSVHF*PSGRYY
Trigger: ATAGTACCTTCCAGATGGGCAAAAGTGTACACTACA...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR TCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAAAGTGGAAGGTGATTTaGTCTAAACTAATTGGTCTG +
Preference number: 2 (lower is better)
Translates to: MERYCGITGTAGIASPARKWKVI*SKLIGL
Trigger: CAGACCAATTAGTTTAGATCAAATCACCTTCCACTT...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCCCTGAAAGGATGCCATaGGGTAATGAACAACAGATC +
Preference number: 2 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFPERMP*GNEQQI
Trigger: GATCTGTTGTTCATTACCCCATGGCATCCTTTCAGG...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR GCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCAGATATGATCCCAAATaGAGTACAAAGTTGGCGTCT +
Preference number: 2 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFRYDPK*STKLAS
Trigger: AGACGCCAACTTTGTACTGCATTTGGGATCATATCT...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp AGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATaGAGCGGTCAGCGCAGCAGGAGGGTGGGGGTGGCG +
Preference number: 3 (lower is better)
Translates to: SAATNEAQVTTP*SGQRSRRVGVA
Trigger: CGCCACCCCCACCCTCCTGCTGCGCTGACCGCTGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp AATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTaGGGTAAAGCCCCAGTCCTGGTCTGGGGAAGAGGT +
Preference number: 3 (lower is better)
Translates to: NPLPAHGGEARL*GKAPVLVWGRG
Trigger: ACCTCTTCCCCAGACCAGGACTGGGGCTTTACCCCAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp AGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTaGCTGCTCACGGCGGCGAGGCGAGGCTCTGGGGTA +
Preference number: 3 (lower is better)
Translates to: RKPFPARRVQIL*LLTAARRGSGV
Trigger: TACCCCAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp TCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTaGAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAG +
Preference number: 3 (lower is better)
Translates to: SHCQESHSLLGV*KSSACSRRRGE
Trigger: CTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp GGTGGCGCAGGCACTTGGGCACAACACAGACAAAGGTaGGGGGTCAGTGCCTGGGAAAAAGGGTCTACTAGT +
Preference number: 3 (lower is better)
Translates to: GGAGTWAQHRQR*GVSAWEKGSTS
Trigger: ACTAGTAGACCCTTTTTCCCAGGCACTGACCCCCCACCTTTGTCTGTGTTGTGCCCAAGTGCCTGCGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp GGGTCTGGCATGCTGAGATGGAGGAGCTTTGTTAGGTaGGCTACCTTTCCAGAGGGCCTGCCTAGAACCCAG +
Preference number: 3 (lower is better)
Translates to: GSGMLRWRSFVR*ATFPEGLPRTQ
Trigger: CTGGGTTCTAGGCAGGCCCTCTGGAAAGGTAGCTCACCTAACAAAGCTCCTCCATCTCAGCATGCCAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp TTTCCCCCAAATCTCACTGCCAAGAAAGCCATTCCCTaGTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGC +
Preference number: 3 (lower is better)
Translates to: FPPNLTAKKAIP*SACANPLPAHG
Trigger: GCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp ACCCTCTCCGAACTCCAGAATCCACCTAACTGGAGCTaGACGAACTTCACTGGGATGCTGGCATGGGCCCTA +
Preference number: 3 (lower is better)
Translates to: TLSELQNPPNWS*TNFTGMLAWAL
Trigger: TAGGGCCCATGCCAGCATCCCAGTGAAGTTCGTCCAGCTCCAGTTAGGTGGATTCTGGAGTTCGGAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCAGGGTGGCGCAGGCACTaGGGCACAACACAGACAAAG +
Preference number: 3 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSGWRRH*GTTQTK
Trigger: CTTTGTCTGTGTTGTGCCCAAGTGCCTGCGCCACCC...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp AACTTTGCAGACAAGGAAAGGCAGTGCAGCTACAAATaGGGCCCAGGTCACGACACCATGCAGCGGTCAGCG +
Preference number: 3 (lower is better)
Translates to: NFADKERQCSYK*GPGHDTMQRSA
Trigger: CGCTGACCGCTGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCTGCAAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp AACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTaGCTGGGGGCCCTCCCTCAGGTACAAGTACTCAGC +
Preference number: 3 (lower is better)
Translates to: NWDQEYRRTSPD*LGALPQVQVLS
Trigger: GCTGAGTACTTGTACCTGAGGGAGGGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCAGCCTGGACTTTCTCTaGCAGGAGCTAGGGATGGGG +
Preference number: 3 (lower is better)
Translates to: KCPTADKGQALALVNCSFSLDFL*QELGMG
Trigger: CCCCATCCCTAGCTCCTGCAAGAGAAAGTCCAGGCT...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp ACAGAGCAGAGATCAGACCTCAGAGGTTTGGACTCCTaGTGCCAGGCCAGGTCTCGGCCAATCCAAGTATAC +
Preference number: 3 (lower is better)
Translates to: TEQRSDLRGLDS*CQARSRPIQVY
Trigger: GTATACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCTGATCTCTGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp GTGGCAAAGCAGCGCAGGGCAAAGCCCTTGGTGTTATaGCCAACTGGGACCAAGAATATAGAAGGACCAGCC +
Preference number: 3 (lower is better)
Translates to: VAKQRRAKPLVL*PTGTKNIEGPA
Trigger: GGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCATAACACCAAGGGCTTTGCCCTGCGCTGCTTTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp GTCAGACATTTGGAGCCAGAGGGCTCCCAACAGCACTaGAGCCTTATCCCTTTGGATTTACCAGCCCACCAG +
Preference number: 3 (lower is better)
Translates to: VRHLEPEGSQQH*SLIPLDLPAHQ
Trigger: CTGGTGGGCTGGTAAATCCAAAGGGATAAGGCTTCAGTGCTGTTGGGAGCCCTCTGGCTCCAAATGTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp GCTGCTGCCACACACACTGCAGGCAAGAACCCAATTTaGGGCCATCTTCACTGCTGGGCATTTGCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: AAATHTAGKNPI*GHLHCWAFAVE
Trigger: TTCCACTGCAAATGCCCAGCAGTGAAGATGGCCTCAAATTGGGTTCTTGCCTGCAGTGTGTGTGGCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp CTGAAAGGATGCCATGGGGTAATGAACAACAGATCCTaGCTTGGGAGGCTGACTTCATGCCTCCCCTTTCCC +
Preference number: 3 (lower is better)
Translates to: LKGCHGVMNNRS*LGRLTSCLPFP
Trigger: GGGAAAGGGGAGGCATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp TGGGGAGGAAGTGAAAGAGCCAGAGGTCACGAGACTTaGCGAAAGTCCTTGACAGAGCAGAGATCAGACCTC +
Preference number: 3 (lower is better)
Translates to: WGGSERARGHET*RKSLTEQRSDL
Trigger: GAGGTCTGATCTCTGCTCTGTCAAGGACTTTCGGCAAGTCTCGTGACCTCTGGCTCTTTCACTTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp GCAGCGCAGGGCAAAGCCCTTGGTGTTATGACCAACTaGGACCAAGAATATAGAAGGACCAGCCCAGATTGG +
Preference number: 3 (lower is better)
Translates to: AAQGKALGVMTN*DQEYRRTSPDW
Trigger: CCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCATAACACCAAGGGCTTTGCCCTGCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCGTGGGAGGGGATGGCTaGGAGGCACCAGAATGCTGG +
Preference number: 3 (lower is better)
Translates to: PLVETCLFLPQDSQTFGAVGGDG*EAPECW
Trigger: CCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCAC...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp CCTGGCTATCAAGTCTTTCTCCCAAAGTCCCCTGACTaGGTCCCTGGCAAGGTAGTACTTCACTCTGAACCC +
Preference number: 3 (lower is better)
Translates to: PGYQVFLPKSPD*VPGKVVLHSEP
Trigger: GGGTTCAGAGTGAAGTACTACCTTGCCAGGGACTCAGTCAGGGGACTTTGGGAGAAAGACTTGATAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp GGAGCTTTGTTAGGTGAGCTACCTTTCCAGAGGGCCTaGCTAGAACCCAGTCAGCCTGGCTATCAAGTCTTT +
Preference number: 3 (lower is better)
Translates to: GALLGELPFQRA*LEPSQPGYQVF
Trigger: AAAGACTTGATAGCCAGGCTGACTGGGTTCTAGGCAGGCCCTCTGGAAAGGTAGCTCACCTAACAAAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTGGCATAGTTCCCTTCTaGTTTCTTCACCAAGCTGTT +
Preference number: 3 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSGIVPF*FLHQAV
Trigger: AACAGCTTGGTGAAGAAACAAGAAGGGAACTATGCC...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp AAAGAGCCAGAGGTCACGAGACTTGCCGAAAGTCCTTaGCAGAGCAGAGATCAGACCTCAGAGGTTTGGACT +
Preference number: 3 (lower is better)
Translates to: KEPEVTRLAESP*QSRDQTSEVWT
Trigger: AGTCCAAACCTCTGAGGTCTGATCTCTGCTCTGTCAAGGACTTTCGGCAAGTCTCGTGACCTCTGGCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp CCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTaGTCACTCAACTCTTCAACATGCCTGCTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: PSQSMSNPSSPA*SLNSSTCLLAA
Trigger: TGCAGCAAGCAGGCATGTTGAAGAGTTGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp TTTAAAGTGCGCATCTCTCACAAGAAGGGTTCTGGGTaGGAACCCTCTTATTTCCAACCTTGGGGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: FKVRISHKKGSG*EPSYFQPWGLL
Trigger: CAGGAGGCCCCAAGGTTGGAAATAAGAGGGTTCCCACCCAGAACCCTTCTTGTGAGAGATGCGCACTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp TTGATGGACCCCCAAAAGCTGACTGACCAGGCAAACTaGTTTCAAGGAATGAAAGAGTGGAGGGTAGGGCTT +
Preference number: 3 (lower is better)
Translates to: LMDPQKLTDQAN*FQGMKEWRVGL
Trigger: AAGCCCTACCCTCCACTCTTTCATTCCTTGAAAGCAGTTTGCCTGGTCAGTCAGCTTTTGGGGGTCCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp TCCAGCGTGATCACTCAACTCTTCAACATGCCTGCTTaGTGCAGGTTTAAACCACACCACCATCCTGTGCTT +
Preference number: 3 (lower is better)
Translates to: SSVITQLFNMPA*CRFKPHHHPVL
Trigger: AAGCACAGGATGGTGGTGTGGTTTAAACCTGCAGCAAGCAGGCATGTTGAAGAGTTGAGTGATCACGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR TCA 72 bp TCAGCAACCTCCTTTGATGGACCCCCAAAAGCTGACTaGCCAGGCAAACTGCTTTCAAGGAATGAAAGAGTG +
Preference number: 3 (lower is better)
Translates to: SATSFDGPPKAD*PGKLLSRNERV
Trigger: CACTCTTTCATTCCTTGAAAGCAGTTTGCCTGGTCAGTCAGCTTTTGGGGGTCCATCAAAGGAGGTTGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGCTCTTATTTCCAACCTaGGGGCCTCCTGCCCTTCTA +
Preference number: 3 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVLLFPT*GPPALL
Trigger: TAGAAGGGCAGGAGGCCCCAAGGTTGGAAATAAGAG...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGAACTTGCCGAAAGTCCTaGACAGAGCAGAGATCAGAC +
Preference number: 3 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRTCRKS*TEQRSD
Trigger: GTCTGATCTCTGCTCTGTCAAGGACTTTCGGCAAGT...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTCCAAGGCCTTCTCATTaGAGGGGATTCCTCAAGACT +
Preference number: 3 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFPRPSH*RGFLKT
Trigger: AGTCTTGAGGAATCCCCTCAAATGAGAAGGCCTTGG...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGAAGATAGTCAGACATTaGGAGCCAGAGGGCTCCCAA +
Preference number: 3 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLKIVRH*EPEGSQ
Trigger: TTGGGAGCCCTCTGGCTCCAAATGTCTGACTATCTT...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGAGGGAGGCCCTGATTTaGGAATGTTTCTTCTCCTGT +
Preference number: 3 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVREALI*ECFFSC
Trigger: ACAGGAGAAGAAACATTCCAAAATCAGGGCCTCCCT...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCCAAAAACTAGAGGTCTaGGTCAGAGTGGACAAAACC +
Preference number: 3 (lower is better)
Translates to: PLVETCLFLPQDSQTFGAQKLEV*VRVDKT
Trigger: GGTTTTGTCCACTCTGACCAAGACCTCTAGTTTTTG...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGCCTTGCAGACACTGCTaGAGCATCTACTGTGTACAT +
Preference number: 3 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLPCRHC*SIYCVH
Trigger: ATGTACACAGTAGATGCTCAAGCAGTGTCTGCAAGG...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTaGTTCACCAGCAAGAGACAGCAACAGAAAGGTCAG +
Preference number: 3 (lower is better)
Translates to: GTILWYYRNCWY*FTSKRQQQKGQ
Trigger: CTGACCTTTCTGTTGCTGTCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp AGTATACCTTATAAAGGACATGCCAGGATCATAGCCTaGGAGAAGTCTAACCAGAGAGCTGCGTGGACAATA +
Preference number: 3 (lower is better)
Translates to: SIPYKGHARIIA*EKSNQRAAWTI
Trigger: TATTGTCCACGCAGCTCTCTGGTTAGACTTCTCCCAGGCTATGATCCTGGCATGTCCTTTATAAGGTATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp TGGCCAATTCAATCGACTAGGTTATCTTTACTCCAATaGACCCAGGCCTTTTCCCAGTCAATCCATGTCCAA +
Preference number: 3 (lower is better)
Translates to: WPIQSTRLSLLQ*TQAFSQSIHVQ
Trigger: TTGGACATGGATTGACTGGGAAAAGGCCTGGGTCCATTGGAGTAAAGATAACCTAGTCGATTGAATTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR-3UTR CAA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCAGGTCAGGGCCCAACTaGCCAGGGTCCTCAAGAATT +
Preference number: 3 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFRSGPN*PGSSRI
Trigger: AATTCTTGAGGACCCTGGCAAGTTGGGCCCTGACCT...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp TATATGCATGGAACGATATTGTGGTATTACAGGAACTaGTGGTATTGCTTCACCAGCAAGAGACAGCAACAG +
Preference number: 3 (lower is better)
Translates to: YMHGTILWYYRN*WYCFTSKRQQQ
Trigger: CTGTTGCTGTCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR GCA 72 bp AATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTaGCCATCTGGAAGGTACTATAGCTTCAGTGTGGTT +
Preference number: 3 (lower is better)
Translates to: NKVQLLNCSVHF*PSGRYYSFSVV
Trigger: AACCACACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp ATGCATGGAACGATATTGTGGTATTACAGGAACTGCTaGTATTGCTTCACCAGCAAGAGACAGCAACAGAAA +
Preference number: 3 (lower is better)
Translates to: MHGTILWYYRNC*YCFTSKRQQQK
Trigger: TTTCTGTTGCTGTCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp TTATCCATCCATGACTGGGTTCCCCTATTCCCAAATTaGTATACACATTTTTATACAGCGCCAGACAGTCAG +
Preference number: 3 (lower is better)
Translates to: LSIHDWVPLFPN*YTHFYTAPDSQ
Trigger: CTGACTGTCTGGCGCTGTATAAAAATGTGTATACCAATTTGGGAATAGGGGAACCCAGTCATGGATGGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CCA 72 bp TCTCCTGCAAACTCAGGAAATTCCTATAAGGAAGAATaGACACACCACAGGTTAGTCATATTTTTCATGCCT +
Preference number: 3 (lower is better)
Translates to: SPANSGNSYKEE*THHRLVIFFMP
Trigger: AGGCATGAAAAATATGACTAACCTGTGGTGTGTCCATTCTTCCTTATAGGAATTTCCTGAGTTTGCAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGTGCAGGGTTCCTGGCTaGCCCTCGCCCCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: LLGVCKSSACSRRRGEALCRVPG*PSPLTL
Trigger: CAGGGTGAGGGGCGAGGGTCAGCCAGGAACCCTGCA...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCGCTGGCCAGCAGGCCTaGGCACCGGACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSAGQQA*APDSGW
Trigger: CCAGCCTGAGTCCGGTGCTCAGGCCTGCTGGCCAGC...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGCAGCAGGCAGGACAGTaGGCGGACAGCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LLGVCKSSACSRRRGEALQQAGQ*ADSSSG
Trigger: GCCACTGCTGCTGTCCGCTCACTGTCCTGCCTGCTG...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGGGGAGCTTTGTTAAATaGGTGGGCCGGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLGVCKSSACSRRRGEALGSFVK*VGRGGS
Trigger: GCTCCCTCCCCGGCCCACTCATTTAACAAAGCTCCC...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCCGGGGTCCCCCGGTGTaGTGGTGCTGCTACCTCTAC +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSRGPPV*WCCYLY
Trigger: GTAGAGGTAGCAGCACCAGCACACCGGGGGACCCCG...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGCCTTTCCAGAGGGCCTaGCTAGAACCCAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLGVCKSSACSRRRGEALPFQRA*LEPSQP
Trigger: AGGCTGACTGGGTTCTAGGCAGGCCCTCTGGAAAGG...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGGGTGGCGCAGGCACTTaGGCACAACACAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: LLGVCKSSACSRRRGEALGGAGT*AQHRQR
Trigger: CCTTTGTCTGTGTTGTGCCCAAGTGCCTGCGCCACC...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCTCCCTGCTCGGCGTGTaGAAATCCTCTGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSSLLGV*KSSACS
Trigger: TGAGCAGGCAGAGGATTTGCACACGCCGAGCAGGGA...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGCCACCTAACTGGAGCTaGACGAACTTCACTGGGATG +
Preference number: 4 (lower is better)
Translates to: LLGVCKSSACSRRRGEALPPNWS*TNFTGM
Trigger: CATCCCAGTGAAGTTCGTCCAGCTCCAGTTAGGTGG...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGACCTGCCTTGGGAGGCTaGCTTCATGCCTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGPALGG*LHASPF
Trigger: GAAAGGGGAGGCATGAAGTCAGCCTCCCAAGGCAGG...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGAAGAGGTTTGGACTCCTaGTGCCAGGCCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGRGLDS*CQARSR
Trigger: CCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCT...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGACTGAGGGGTAAGAACTaGGCTGGCACCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGLRGKN*AGTCWR
Trigger: CCTCCAGCAGGTGCCAGCCCAGTTCTTACCCCTCAG...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCCTGAGTCAGTTCCAGTaGGCACCAGGTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSLSQFQ*APGCHW
Trigger: CCAATGGCAACCTGGTGCCCACTGGAACTGACTCAG...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCTCTCCCGTAGCCAGCTaGATGATGGCGCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSSPVAS*MMAPFM
Trigger: CATGAAAGGCGCCATCATCCAGCTGGCTACGGGAGA...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGCATCACAACACCCTCTaGGGTTGTCCTGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: LLGVCKSSACSRRRGEALHHNTL*GCPERM
Trigger: CATCCTTTCAGGACAACCCCAGAGGGTGTTGTGATG...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCCTTGCCGAAAGTCCTTaGCAGAGCAGAGATCAGACC +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSLAESP*QSRDQT
Trigger: GGTCTGATCTCTGCTCTGTCAAGGACTTTCGGCAAG...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCTTGGAAGCTCGGGGCTaGCCAGCAGGCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGALEARG*PAGLST
Trigger: GGTGCTCAGGCCTGCTGGCCAGCCCCGAGCTTCCAA...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCGGCGAGGCGAGGCTCTaGGGTAAAGCCCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAGEARL*GKAPVL
Trigger: CAGGACTGGGGCTTTACCCCAGAGCCTCGCCTCGCC...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTTTGCCCCAGGCCTGCTaGTCCCCATCACAACACCCT +
Preference number: 4 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSLPQAC*SPSQHP
Trigger: AGGGTGTTGTGATGGGGAGCAGCAGGCCTGGGGCAA...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCCGGGGAGGGAGCCTGTaGGGGAGGAGTGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFRGGSL*GRSGSF
Trigger: GAAGGAGCCACTCCTCCCCCACAGGCTCCCTCCCCG...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTAATGGGCATCCGACCTaGAGCAAGGTCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSNGHPT*SKVQRL
Trigger: CAGCCGCTGGACCTTGCTCCAGGTCGGATGCCCATT...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGTCACAAGAAGGGTTCTaGGTGGGAACCCTCTTATTT +
Preference number: 4 (lower is better)
Translates to: LLGVCKSSACSRRRGEALSQEGF*VGTLLF
Trigger: AAATAAGAGGGTTCCCACCCAGAACCCTTCTTGTGA...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCGCAGAGTCCTGCAGATaGGAGTGCTCCTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAAESCR*ECSSPT
Trigger: TGTGGGGGAGGAGCACTCTCATCTGCAGGACTCTGC...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCGAGGAAGGACGCTTGTaGGAAACCCATGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSEEGRL*ETHANN
Trigger: ATTGTTTGCATGGGTTTCTCACAAGCGTCCTTCCTC...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCCCTGTGGGGGAGGAGTaGCTCCTTCAGCCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAPVGEE*LLQPEV
Trigger: CACTTCTGGCTGAAGGAGCCACTCCTCCCCCACAGG...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGATTGGGGGAGCACAGCTaGCCTGAGAAACTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGLGEHS*PEKLSY
Trigger: GTAACTCAGTTTCTCAGGCCAGCTGTGCTCCCCCAA...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCACTTCACTCTGAACCCTaGAGGGGCTCTCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSLHSEP*RGSPSG
Trigger: CCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAAG...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGATGGAACCCCACGGTCTaGGCTGATGCTAAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGWNPTV*ADAKSC
Trigger: ACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCA...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCCAGGTCACGACACCATaGAGCGGTCAGCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFQVTTP*SGQRSR
Trigger: CCTGCTGCGCTGACCGCTGCATGGTGTCGTGACCTG...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCTGCCATGATGGGCACTaGCCAGCCACGCATTCGCCC +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFCHDGH*PATHSP
Trigger: GGGCGAATGCGTGGCTGGGCAGTGCCCATCATGGCA...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTGCTTTGTTAAATGAGTaGGCCGGGGAGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSALLNE*AGEGAC
Trigger: ACAGGCTCCCTCCCCGGCCCACTCATTTAACAAAGC...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCAGGTCTATGTTTTACTaGTTCCTGATGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSRSMFY*FLMGLR
Trigger: CCTCAGTCCCATCAGGAACCAGTAAAACATAGACCT...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTCGTTGGCTCCTTGTCTaGGAAGGTGGCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSRWLLV*EGGSGL
Trigger: CAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACG...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGATCTTATTTCCAACCTTaGGGCCTCCTGCCCTTCTAC +
Preference number: 4 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGSYFQP*GLLPFY
Trigger: GTAGAAGGGCAGGAGGCCCCAAGGTTGGAAATAAGA...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCAAGAAGGGTTCTGGGTaGGAACCCTCTTATTTCCAA +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSKKGSG*EPSYFQ
Trigger: TTGGAAATAAGAGGGTTCCCACCCAGAACCCTTCTT...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTAGGACCAGCCCAGATTaGCTGGGGGCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGRTSPD*LGALPQ
Trigger: CTGAGGGAGGGCCCCCAGCCAATCTGGGCTGGTCCT...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCTGGACCCCCAAAAGCTaGCTGACCAGGCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAWTPKS*LTRQTA
Trigger: AGCAGTTTGCCTGGTCAGTCAGCTTTTGGGGGTCCA...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGCATCCCTATCGAACATaGCTTCGCTATAAAATAACA +
Preference number: 4 (lower is better)
Translates to: LLGVCKSSACSRRRGEALHPYRT*LRYKIT
Trigger: TGTTATTTTATAGCGAAGTCATGTTCGATAGGGATG...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCGGCCTGACTTTTCTCTaGCAGCTCTGCAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAGLTFL*QLCRVP
Trigger: AGGAACCCTGCAGAGCTGGCAGAGAAAAGTCAGGCC...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGTCCTTGCCCCAGGCCTaGTGCTCCCCATCACAACAC +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMSLPQA*CSPSQH
Trigger: GTGTTGTGATGGGGAGCAGCAGGCCTGGGGCAAGGA...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTTCCCCATATCCTCGCTaGTCACGGGGAGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSSPYPR*SRGGLV
Trigger: AACGAGACCTCCCCGTGACCAGCGAGGATATGGGGA...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTGCACCGGACTCAGGCTaGGAAGGCTCTACCACACGG +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGAPDSG*EGSTTR
Trigger: CCGTGTGGTAGAGCCTTCCCAGCCTGAGTCCGGTGC...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 72 bp CACGCATTCGCCCTGGCCCAGGGCATAGTTCCCTTCTaGTTTCTTCACCAAGCTGTTTGGCAGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HAFALAQGIVPF*FLHQAVWQWKW
Trigger: CCACTTCCACTGCCAAACAGCTTGGTGAAGAAACAAGAAGGGAACTATGCCCTGGGCCAGGGCGAATGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCACTGCACGTCCAGACTTaGTGCTACCAGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHALHVQT*CYQDLR
Trigger: TCGGAGATCCTGGTAGCATCAAGTCTGGACGTGCAG...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTCCAAAGTCCCCTGACTaGGTCCCTGGCAAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSPKSPD*VPGKVV
Trigger: TACTACCTTGCCAGGGACTCAGTCAGGGGACTTTGG...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGAGGACAAAACCAACTTTaGAGACAAGGAAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGGQNQL*RQGKAV
Trigger: CACTGCCTTTCCTTGTCTGCAAAGTTGGTTTTGTCC...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCATACTCGCTAAAAACTaGTCTCATGTCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: FTLNPEGALPPGPRAARSILAKN*SHVSCK
Trigger: TTTGCAGGAGACATGAGAGCAGTTTTTAGCGAGTAT...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGAGGCACATGGGCTGCTaGCACACACACTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMRHMGC*HTHCRQ
Trigger: TTGCCTGCAGTGTGTGTGGCAGCAGCCCATGTGCCT...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGCAGCTCACAACTACGTaGAAACTCCCTGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMQLTTT*KLPAQG
Trigger: CCCCTGGGCAGGGAGTTTGCACGTAGTTGTGAGCTG...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTCTTCACCCTTGCTGTTaGGGGAGTCAAGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSLHPCC*GSQGLH
Trigger: GTGAAGCCCTTGACTCCCCCAACAGCAAGGGTGAAG...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGGGTCCCCCGGTGTGCTaGTGCTGCTACCTCTACCCG +
Preference number: 4 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLGPPVC*CCYLYP
Trigger: CGGGTAGAGGTAGCAGCACCAGCACACCGGGGGACC...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCCCCACCTGTAGCCGATaGCAGGGCAGAGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFPTCSR*QGREKS
Trigger: ACTCTTCTCTCTGCCCTGCCATCGGCTACAGGTGGG...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCACAACACAGACAAAGGTaGGGGGTCAGTGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHAQHRQR*GVSAWE
Trigger: TTCCCAGGCACTGACCCCCCACCTTTGTCTGTGTTG...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGTGGGAGGGGATGGCTTaGAGGCACCAGAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKWEGMA*RHQNAG
Trigger: CCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCA...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGCACAGGCAGCAGGCCTaGGTCAGTTCCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLHRQQA*VSSSGH
Trigger: GTGCCCACTGGAACTGACTCAGGCCTGCTGCCTGTG...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTGGCCATTGGCTCTCCTaGATGTCCACGACCGTGCTA +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGGHWLS*MSTTVL
Trigger: TAGCACGGTCGTGGACATTCAGGAGAGCCAATGGCC...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCGCTGGCCTGAGAAACTaGGTTACTGTTCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAAGLRN*VTVQAL
Trigger: CAGAGCTTGAACAGTAACTCAGTTTCTCAGGCCAGC...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCTTACCTCCTGTGGAATaGAAGAGGGACGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFLPPVE*KRDGAA
Trigger: CGCTGCTCCGTCCCTCTTTCATTCCACAGGAGGTAA...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTGGCTCCCAACAGCACTaGAGCCTTATCCCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSGSQQH*SLIPLD
Trigger: ATCCAAAGGGATAAGGCTTCAGTGCTGTTGGGAGCC...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTGGGCAAACAGGTTCCTaGTCGACATCCAACCTAATA +
Preference number: 4 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSGQTGS*STSNLI
Trigger: TATTAGGTTGGATGTCGATCAGGAACCTGTTTGCCC...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCAGGCAAGAACCCAATTTaGGGCCATCTTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHAGKNPI*GHLHCW
Trigger: CCAGCAGTGAAGATGGCCTCAAATTGGGTTCTTGCC...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACCCCCCGGTGTGCTGGTaGTGCTACCTCTACCCGTGG +
Preference number: 4 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYPPVCW*CYLYPW
Trigger: CCACGGGTAGAGGTAGCAGCACCAGCACACCGGGGG...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGTCGTCCGCCCAGGGCTaGAAGAGGACCAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLSSAQG*KRTNPG
Trigger: GCCAGGGTTGGTCCTCTTGCAGCCCTGGGCGGACGA...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAACGGGAGCCCTCTCCTaGCGGCTGGCTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARTGALS*RLALPL
Trigger: GAGGGGAAGAGCCAGCCGGCAGGAGAGGGCTCCCGT...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGCGTGTGCAAATCCTCTaGCTGCTCACGGCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLRVQIL*LLTAAR
Trigger: CCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACG...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGCACACCACCATCCTGTaGTTCCCCCTAAATCGCCCA +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMHTTIL*FPLNRP
Trigger: TGGGCGATTTAGGGGGAAGCACAGGATGGTGGTGTG...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCATGGGCTGGCACCTGCTaGAGGGGTTTCATGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSWAGTC*RGFMQS
Trigger: ACTTTGCATGAAACCCCTCCAGCAGGTGCCAGCCCA...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGCTGGACGAACTTCACTaGGATGCTGGCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKLDELH*DAGMGP
Trigger: AGGGCCCATGCCAGCATCCCAGTGAAGTTCGTCCAG...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 72 bp GAAAGAGCCAGAGGTCACGAGACTTGCCGAAAGTCCTaGACAGAGCAGAGATCAGACCTCAGAGGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: ERARGHETCRKS*TEQRSDLRGLD
Trigger: GTCCAAACCTCTGAGGTCTGATCTCTGCTCTGTCAAGGACTTTCGGCAAGTCTCGTGACCTCTGGCTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 72 bp ATACTGAAGCACTCACGGTCAGGTCAGCAACCTCCTTaGATGGACCCCCAAAAGCTGACTGACCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ILKHSRSGQQPP*MDPQKLTDQAN
Trigger: GTTTGCCTGGTCAGTCAGCTTTTGGGGGTCCATCAAAGGAGGTTGCTGACCTGACCGTGAGTGCTTCAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTAAAAACTTACCCACCTaGAAGCTAGTGGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSKNLPT*KLVGEP
Trigger: AGGCTCCCCCACTAGCTTTCAGGTGGGTAAGTTTTT...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTGAAATGTCCTACTGCTaGCAAGGGACAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGEMSYC*QGTGSG
Trigger: GCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTTC...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTCAAGTATCAGTCAAGTaGGGGATCAACCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSQVSVK*GINPAF
Trigger: GAAGGCAGGGTTGATCCCTCACTTGACTGATACTTG...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTCGCTCACTTCGGCACTaGGCACAAAATCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGRSLRH*AQNPGS
Trigger: AGACCCAGGATTTTGTGCGCAGTGCCGAAGTGAGCG...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTTGCAAATCCTCTGCCTaGTCACGGCGGCGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFCKSSA*SRRRGE
Trigger: CTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCA...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTAAGAAAGCCATTCCCTaGTCGGCGTGTGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSKKAIP*SACANP
Trigger: AGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTT...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCTTTACTCCCTCCCTCTaGCATCTGCTCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFFTPSL*HLLPKP
Trigger: AGGCTTTGGGAGCAGATGGCAGAGGGAGGGAGTAAA...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTCTCAACTCTTCAACATaGCTGCTTGCTGCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSLNSST*LLAAGL
Trigger: TAAACCTGCAGCAAGCAGGCATGTTGAAGAGTTGAG...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTCAGCTTTACCTCCTGTaGAATGAAAGAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSQLYLL*NERGTE
Trigger: CTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTG...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGCTTCACCAAGCTGTTTaGCAGTGGAAGTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMLHQAV*QWKWRG
Trigger: TCCCCTCCACTTCCACTGCCAAACAGCTTGGTGAAG...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGGCAGACTGGCTCTCCTaGGGGGTAAGAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLADWLS*GVRTGL
Trigger: CAGCCCAGTTCTTACCCCTCAGGAGAGCCAGTCTGC...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGCCACAAAATGCAGCATaGCAAATCCAGGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMPQNAA*QIQAIG
Trigger: GCCAATGGCCTGGATTTGTCATGCTGCATTTTGTGG...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCACTAAAGCCACCTGGATaGCAACATTCCCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHALKPPG*QHSHPF
Trigger: GAAAGGATGGGAATGTTGTCATCCAGGTGGCTTTAG...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGCCTGGCCTTCACCCTTaGTGTTGGGGGAGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLPGLHP*CWGSQG
Trigger: CCCTTGACTCCCCCAACAGCAAGGGTGAAGGCCAGG...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AAACTAGAGGTCTTGGTCAGAGTGGACAAAACCAACTTTGCAGACAAGGAAAGGCCGGTGTGCTGGTGCTaGTACCTCTACCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KLEVLVRVDKTNFADKERPVCWC*YLYPWS
Trigger: ACTCCACGGGTAGAGGTAGCAGCACCAGCACACCGG...CCTTTCCTTGTCTGCAAAGTTGGTTTTGTCCACTCTGACCAAGACCTCTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTATGAACAACAGATCCTaGCTTGGGAGGCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSMNNRS*LGRLTS
Trigger: TGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCAT...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGGTTTCTTCTCCTGTGTaGACCCCCTTCCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKVSSPV*TPFLPC
Trigger: GCAAGGAAGGAAGGGGGTGCACACAGGAGAAGAAAC...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTAACATGCCTGCTTGCTaGAGGTTTAAACCACACCAC +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSNMPAC*RFKPHH
Trigger: GTGGTGTGGTTTAAACCTGCAGCAAGCAGGCATGTT...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCTTCAACATGCCTGCTTaGTGCAGGTTTAAACCACAC +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGAFNMPA*CRFKPH
Trigger: GTGTGGTTTAAACCTGCAGCAAGCAGGCATGTTGAA...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACCTGGGAAGGTGGCTCTaGCCTGCACGTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYLGRWL*PARPDL
Trigger: CAAGTCTGGACGTGCAGGCCAGAGCCACCTTCCCAG...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCACAAGAGGACCAACCCTaGCCATATACAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSQEDQP*PYTKKG
Trigger: CCCCTTCTTTGTATATGGCCAGGGTTGGTCCTCTTG...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCAATTTCAAAGTGGGTCTaGCATGCTGAGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHAISKWV*HAEMEE
Trigger: CTCCTCCATCTCAGCATGCCAGACCCACTTTGAAAT...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCAGGTCTTGGTCAGAGTaGACAAAACCAACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGARSWSE*TKPTLQ
Trigger: CTGCAAAGTTGGTTTTGTCCACTCTGACCAAGACCT...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGGGCCATCTTCACTGCTaGGCATTTGCAGTGGAATGG +
Preference number: 4 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKGHLHC*AFAVEW
Trigger: CCATTCCACTGCAAATGCCCAGCAGTGAAGATGGCC...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCGACCCTAAAGCCACCTaGATGACAACATTCCCATCC +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFDPKAT*MTTFPS
Trigger: GGATGGGAATGTTGTCATCCAGGTGGCTTTAGGGTC...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTTGGATGCCTGGATGTTaGATTAGTGAAGACGCTACA +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSWMPGC*ISEDAT
Trigger: TGTAGCGTCTTCACTAATTCAACATCCAGGCATCCA...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGTCTACCCGTGGAGTCTaGGAACCTGAAAACAACTGT +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMSTRGV*EPENNC
Trigger: ACAGTTGTTTTCAGGTTCTCAGACTCCACGGGTAGA...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACCAGTGCAGCTACAAATaGGGCCCAGGTCACGACACC +
Preference number: 4 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYQCSYK*GPGHDT
Trigger: GGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTG...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGGGGAGGCCACAGCTCTaGCCGAGATTTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVGRPQL*PRFRAQ
Trigger: CTGTGCTCTAAATCTCGGTCAGAGCTGTGGCCTCCC...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGCTTATTATCCATCCATaGCTGGGTTCCCCTATTCCC +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMLIIHP*LGSPIP
Trigger: GGGAATAGGGGAACCCAGTCATGGATGGATAATAAG...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCAAGCCCTTGGTGTTATaGCCAACTGGGACCAAGAAT +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFKPLVL*PTGTKN
Trigger: ATTCTTGGTCCCAGTTGGTCATAACACCAAGGGCTT...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCACCTTCATCTCCAGCGTaGTCACTCAACTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSPSSPA*SLNSST
Trigger: TGTTGAAGAGTTGAGTGATCACGCTGGAGATGAAGG...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCAGTGGAGGATAGTGGATaGCTGGATGTTGAATTAGTG +
Preference number: 4 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHAVEDSG*LDVELV
Trigger: CACTAATTCAACATCCAGGCATCCACTATCCTCCAC...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCACTCACTTTGCTCTGCTaGTCACCAACCACAAAATGC +
Preference number: 4 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSLTLLC*SPTTKC
Trigger: GCATTTTGTGGTTGGTGAGCAGCAGAGCAAAGTGAG...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTCTCAGCTTGTGTCCTTaGAGACACTGCTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGLSLCP*RHCLSI
Trigger: GATGCTCAAGCAGTGTCTGCAAGGACACAAGCTGAG...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGAGGAACTGCTGGTATTaGTTCACCAGCAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMRNCWY*FTSKRQ
Trigger: CTGTCTCTTGCTGGTGAAGCAATACCAGCAGTTCCT...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGACCAACTGGGACCAAGAATATAGAAGGACCAGCCCAGATTGGCTGGGGGCCCTGGCCCTTGTCAACTaGTCATTCTTAAAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: MTNWDQEYRRTSPDWLGALALVN*SFLKSW
Trigger: CCAACTTTTTAAGAATGAGCAGTTGACAAGGGCCAG...GGCCCCCAGCCAATCTGGGCTGGTCCTTCTATATTCTTGGTCCCAGTTGGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTTGCTGCCACACACACTaGAGGCAAGAACCCAATTTG +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGCCHTH*RQEPNL
Trigger: CAAATTGGGTTCTTGCCTGCAGTGTGTGTGGCAGCA...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACAGTCGACTTGCTCCCTaGGGCATCAGAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYSRLAP*GIRRGF
Trigger: GAAGCCCCTTCTGATGCCCCAGGGAGCAAGTCGACT...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGTGCATGCTGTATCTTTaGAAGCTCGGGGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLCMLYL*KLGAGQ
Trigger: CTGGCCAGCCCCGAGCTTCCAAAGATACAGCATGCA...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCACCTGAAAGGATGCCATaGGGTAATGAACAACAGATC +
Preference number: 4 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHAPERMP*GNEQQI
Trigger: GATCTGTTGTTCATTACCCCATGGCATCCTTTCAGG...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGAGAACCCAGTCAGCCTaGCTATCAAGTCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKRTQSA*LSSLSP
Trigger: GGGAGAAAGACTTGATAGCCAGGCTGACTGGGTTCT...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 72 bp CAGACCAGGCTTCTGGTCCAAAGATGGATCCTAGAGTaGAAAGAGCAACTGACAGCTGCAAAGACCCAGATG +
Preference number: 4 (lower is better)
Translates to: QTRLLVQRWILE*KEQLTAAKTQM
Trigger: CATCTGGGTCTTTGCAGCTGTCAGTTGCTCTTTCAACTCTAGGATCCATCTTTGGACCAGAAGCCTGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGAGAACAGGGAGGCCCTaGTTTTGGAATGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMRTGRP*FWNVSS
Trigger: AGAAGAAACATTCCAAAATCAGGGCCTCCCTGTTCT...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGCATGTGAAAATGCCATaGTGGGCACTGCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLHVKMP*WALPSH
Trigger: GTGGCTGGGCAGTGCCCATCATGGCATTTTCACATG...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCAAACCCATGCAAACAATaGACTCTAGGAATGAGTTGC +
Preference number: 4 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHANPCKQ*TLGMSC
Trigger: GCAACTCATTCCTAGAGTTCATTGTTTGCATGGGTT...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGGGGATCACAAAACTTTaGGTTCGCAATCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKGITKL*VRNLPG
Trigger: CCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCC...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGAACTGGGCTGGCACCTaGTGGAGGGGTTTCATGCAA +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVNWAGT*WRGFMQ
Trigger: TTGCATGAAACCCCTCCAGCAGGTGCCAGCCCAGTT...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGCTCCTTCCTCTGAGCTaGCACCACACGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVLLPLS*HHTIVL
Trigger: CAGGACTATCGTGTGGTGGCAGCTCAGAGGAAGGAG...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGAGGGAGGCTGACTTCATaGCTCCCCTTTCCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRGRLTS*LPFPPN
Trigger: ATTTGGGGGAAAGGGGAGGCATGAAGTCAGCCTCCC...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTACTGACCAGGCAAACTaGTTTCAAGGAATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSTDQAN*FQGMKE
Trigger: CTCTTTCATTCCTTGAAAGCAGTTTGCCTGGTCAGT...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGAGAGCAACTGACAGCTaGAAAGACCCAGATGCTTAT +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMRATDS*KDPDAY
Trigger: ATAAGCATCTGGGTCTTTGCAGCTGTCAGTTGCTCT...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTTACGTGCAAACTCCCTaGCCAGGGGGTGGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFYVQTP*PGGGCK
Trigger: TTTACACCCACCCCCTGGGCAGGGAGTTTGCACGTA...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCTTCATTTTCCCGCATTaGAACGCCCTTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFFIFPH*NALQWT
Trigger: TGTCCATTGAAGGGCGTTCCAATGCGGGAAAATGAA...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTTGCTACTATAAGCTGTaGATCATCATTTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSCYYKL*IIIFGS
Trigger: AGAGCCAAAAATGATGATCCACAGCTTATAGTAGCA...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACTCCCCATTTGGCAGGTaGGGAGGAAGTGAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYSPFGR*GGSERA
Trigger: GGCTCTTTCACTTCCTCCCCACCTGCCAAATGGGGA...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTTATTACAGGAACTGCTaGTATTGCTTCACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSYYRNC*YCFTSK
Trigger: CTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATA...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTCAGAGATTCTTTTCCTaGGGACCATATTTTATGACA +
Preference number: 4 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSQRFFS*GPYFMT
Trigger: TGTCATAAAATATGGTCCCCAGGAAAAGAATCTCTG...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGACTGGGATGCTGGCATaGGCCCTAATGTGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVTGMLA*ALMWFP
Trigger: AGGGAACCACATTAGGGCCCATGCCAGCATCCCAGT...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGTATAAGGAGACCCAATaGACTGCAGCGAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLYKETQ*TAARWM
Trigger: CATCCACCTCGCTGCAGTTCATTGGGTCTCCTTATA...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp AAACTAGAGGTCTTGGTCAGAGTGGACAAAACCAACTTTGCAGACAAGGAAAGGACAAAGTGTGGAAGGTaGGAGGTGGCAAGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: KLEVLVRVDKTNFADKERTKCGR*EVARLA
Trigger: TGCCAACCTTGCCACCTCTCACCTTCCACACTTTGT...CCTTTCCTTGTCTGCAAAGTTGGTTTTGTCCACTCTGACCAAGACCTCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTGTGGGTCTGGCATGCTaGGATGGAGGAGCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFVGLAC*DGGALL
Trigger: TAACAAAGCTCCTCCATCTCAGCATGCCAGACCCAC...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGACCAGCAAGATTCTGTaGGATTTCAAAGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKTSKIL*DFKVGL
Trigger: CAGACCCACTTTGAAATCTCACAGAATCTTGCTGGT...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGCAGTGGGCACCAGGTTaGCATTGGCTACAACCATTG +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLQWAPG*HWLQPL
Trigger: CAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTG...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAAAGGTGGCTCTGGCCTaGACGTCCAGACTTGATGCT +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARKVALA*TSRLDA
Trigger: AGCATCAAGTCTGGACGTGCAGGCCAGAGCCACCTT...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTGTTGTCCTGAAAGGATaGCATGGGGTAATGAACAAC +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGVVLKG*HGVMNN
Trigger: GTTGTTCATTACCCCATGGCATCCTTTCAGGACAAC...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGCTGAGCATAGTGGAGTaGAGGATAGTGGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVLSIVE*RIVDAW
Trigger: CCAGGCATCCACTATCCTCCACTCCACTATGCTCAG...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGGTAAAGCCCCAGTCCTaGTCTGGGGAAGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVVKPQS*SGEEVH
Trigger: ATGAACCTCTTCCCCAGACCAGGACTGGGGCTTTAC...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGGCAGCATTCAGAGAATaGGGGACAGAGAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLAAFRE*GTEKGK
Trigger: TTTCCCCTTCTCTGTCCCCCATTCTCTGAATGCTGC...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTTGGAAGTTACCAGGTTaGAAAGTCACAAGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGWKLPG*KVTSSP
Trigger: TGGGCTACTTGTGACTTTCCAACCTGGTAACTTCCA...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCACATGGAACGATATTGTaGTATTACAGGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSHGTIL*YYRNCW
Trigger: CCAGCAGTTCCTGTAATACCACAATATCGTTCCATG...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGGGTGTTATGACCAACTaGGACCAAGAATATAGAAGG +
Preference number: 4 (lower is better)
Translates to: RMPWGNEQQILPWEADFMGVMTN*DQEYRR
Trigger: CCTTCTATATTCTTGGTCCCAGTTGGTCATAACACC...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCATATTATTGCATAATGTaGGAGACCTTCCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSYYCIM*ETFPTP
Trigger: TGGGGTAGGGAAGGTCTCCCACATTATGCAATAATA...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGTCCTTCAGCCAGAAGTaGGGCATATGGCACAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVSFSQK*GIWHKV
Trigger: CACTTTGTGCCATATGCCTCACTTCTGGCTGAAGGA...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAAGGAGCTTTGTTAGGTaGGCTACCTTTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARRSFVR*ATFPEG
Trigger: GCCCTCTGGAAAGGTAGCTCACCTAACAAAGCTCCT...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGGGCATATGGGACATGTaGAAATGCCATGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLGIWDM*KCHDGH
Trigger: GTGCCCATCATGGCATTTTCACATGTCCCATATGCC...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGGCGTGGACAATACCCTaGGTTGCCTTCAAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVAWTIP*VAFKSL
Trigger: TAGACTCTTGAAGGCAACTCAGGGTATTGTCCACGC...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGACCCCCAAAAGCTGACTaGCCAGGCAAACTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARPPKAD*PGKLLS
Trigger: TGAAAGCAGTTTGCCTGGTCAGTCAGCTTTTGGGGG...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACACACAAACCAGATACTaGAGCACTCACGGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYTQTRY*STHGQV
Trigger: GACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGT...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGCCCCTAAATCGCCCATaGTGCCCGCAGGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVPLNRP*CPQVKI
Trigger: TATTTTTACCTGCGGGCATCATGGGCGATTTAGGGG...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTGCTGGAGGGGTTTCATaGAAAGTATACCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFAGGVS*KVYPAG
Trigger: ACCTGCTGGGTATACTTTGCATGAAACCCCTCCAGC...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACCTTCGATGCTCACTTTaGTCTGCTGCTCACCAACCA +
Preference number: 4 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYLRCSL*SAAHQP
Trigger: TGGTTGGTGAGCAGCAGAGCAAAGTGAGCATCGAAG...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCAGATATGATCCCAAATaGAGTACAAAGTTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: KCPTADKGQALALVNCSFRYDPK*STKLAS
Trigger: AGACGCCAACTTTGTACTGCATTTGGGATCATATCT...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGATATGACTATTGTTCCTaGTGGGGAGGCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARYDYCS*WGGSRA
Trigger: TGCCCTGCTGCCTCCCCAGCAGGAACAATAGTCATA...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCACTAGATTCTCTTGAATaGAAGTATCAGTCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHALDSLE*KYQSSE
Trigger: CTCACTTGACTGATACTTGCATTCAAGAGAATCTAG...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGACATCTGATAATAAATaGGCATCCGACCTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKTSDNK*ASDLEQ
Trigger: TTGCTCCAGGTCGGATGCCCATTTATTATCAGATGT...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAACTAGAGGTCTTGGTCAGAGTGGACAAAACCAACTTTGCAGACAAGGAAAGGGCACCAGGTTGCCATTaGCTACAACCATTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLEVLVRVDKTNFADKERAPGCH*LQPLLW
Trigger: CCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGC...CCTTTCCTTGTCTGCAAAGTTGGTTTTGTCCACTCTGACCAAGACCTCTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGATGTCACATAGCTCTCTaGATCCCAAGACCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRCHIAL*IPRPSS
Trigger: AGAGGACGGTCTTGGGATCCAGAGAGCTATGTGACA...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGATGGAACGCCCTTCAATaGACAGCTTTACCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRWNALQ*TALPPV
Trigger: CACAGGAGGTAAAGCTGTCCATTGAAGGGCGTTCCA...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGGCCAGGATCATAGCCTaGGAGAAGTCTAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLARIIA*EKSNQR
Trigger: TCTCTGGTTAGACTTCTCCCAGGCTATGATCCTGGC...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAACAAGGGACAGGCTCTaGCCCTTGTCAACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARTRDRL*PLSTAH
Trigger: ATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGT...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGCAGGGCAAAGCCCTTaGTGTTATGACCAACTGGGA +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARAGQSP*CYDQLG
Trigger: TCCCAGTTGGTCATAACACCAAGGGCTTTGCCCTGC...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGGAAGCCTTATCCCTTTaGATTTACCAGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVEALSL*IYQPTS
Trigger: GCTGGTGGGCTGGTAAATCCAAAGGGATAAGGCTTC...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTGCATGGGCCCTAATGTaGTTCCCTTCATTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: KLASGSDTNQILKHSRSGAWALM*FPSFSF
Trigger: AAAACTAAATGAAGGGAACCACATTAGGGCCCATGC...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGGTTGGCGTCTGGTTCTaGCACAAACCAGATACTGAA +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVVGVWF*HKPDTE
Trigger: TTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAAC...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGATGCTCACTTTGCTCTaGTGCTCACCAACCACAAAA +
Preference number: 4 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLMLTLL*CSPTTK
Trigger: TTTTGTGGTTGGTGAGCAGCAGAGCAAAGTGAGCAT...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGTGGTATTACAGGAACTaGTGGTATTGCTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLWYYRN*WYCFTS
Trigger: GCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCA...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCCTGCAGCGAGGTGGATaGGAGCTGAGCATAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFLQRGG*ELSIVE
Trigger: CTCCACTATGCTCAGCTCCCATCCACCTCGCTGCAG...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAACTAGAGGTCTTGGTCAGAGTGGACAAAACCAACTTTGCAGACAAGGAAAGGATATGGCACAAAGTGTaGAAGGTGAGAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: KLEVLVRVDKTNFADKERIWHKV*KVRGGK
Trigger: CTTGCCACCTCTCACCTTCCACACTTTGTGCCATAT...CCTTTCCTTGTCTGCAAAGTTGGTTTTGTCCACTCTGACCAAGACCTCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCACCCAGCAGGTAGCCTaGACATCTGATAATAAATGG +
Preference number: 4 (lower is better)
Translates to: PLVETCLFLPQDSQTFGATQQVA*TSDNKW
Trigger: CCATTTATTATCAGATGTCCAGGCTACCTGCTGGGT...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp AAACTAGAGGTCTTGGTCAGAGTGGACAAAACCAACTTTGCAGACAAGGAAAGGCAGAATCCACCTAACTaGAGCTGGACGAACTTCACT +
Preference number: 4 (lower is better)
Translates to: KLEVLVRVDKTNFADKERQNPPN*SWTNFT
Trigger: AGTGAAGTTCGTCCAGCTCCAGTTAGGTGGATTCTG...CCTTTCCTTGTCTGCAAAGTTGGTTTTGTCCACTCTGACCAAGACCTCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGGGGGACCATATTTTATaGCAGATACCTTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVGDHIL*QIPLQL
Trigger: GAGCTGCAAAGGTATCTGTCATAAAATATGGTCCCC...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGTGTCCTTGCAGACACTaGTTGAGCATCTACTGTGTA +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVCPCRH*LSIYCV
Trigger: TACACAGTAGATGCTCAAGCAGTGTCTGCAAGGACA...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACAAAATCCTGGGTCTaGAGGTCCTCCACCCGCTTC +
Preference number: 4 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFTKSWV*RSSTRF
Trigger: GAAGCGGGTGGAGGACCTCCAGACCCAGGATTTTGT...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGTGTGAGATTTCAAAGTaGGTCTGGCATGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLCEISK*VWHAEM
Trigger: CATCTCAGCATGCCAGACCCACTTTGAAATCTCACA...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCCTACCCCAGGAAAGCTaGAGAGTGAAGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFLPQES*RVKASQ
Trigger: CTGGGAAGCCTTCACTCTCCAGCTTTCCTGGGGTAG...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
3UTR CAA 72 bp GAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTaGGCGTCTGGTTCTGACACAAACCAGATACTGAAG +
Preference number: 4 (lower is better)
Translates to: EGERYDPKCSTK*ASGSDTNQILK
Trigger: CTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCCAGCGGCTGAGTACTTaGATGATGTGGCAATTGCCC +
Preference number: 4 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFQRLST*MMWQLP
Trigger: GGGCAATTGCCACATCATTCAAGTACTCAGCCGCTG...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCGATGGGGAAGGGCTATaGAGCAGAGGATCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFDGEGL*SRGSSR
Trigger: TCTGCTTGATCCTCTGCTTCATAGCCCTTCCCCATC...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGAATAGAGATTATAGCTaGAGGGGAAACCAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVNRDYS*RGNQRD
Trigger: GTCTCTCTGGTTTCCCCTTCAGCTATAATCTCTATT...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACACAACCTTTAGCACCTaGACACTAAGAATGACTCCA +
Preference number: 4 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYTTFST*TLRMTP
Trigger: TGGAGTCATTCTTAGTGTTCAGGTGCTAAAGGTTGT...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGAAACTAAACCCCACTTaGGGTGCTATTTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVKLNPT*GAISAK
Trigger: TTTGGCTGAAATAGCACCTCAAGTGGGGTTTAGTTT...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGGACAATACCCTGAGTTaGCTTCAAGAGTCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVDNTLS*LQESKD
Trigger: GTCTTTAGACTCTTGAAGGCAACTCAGGGTATTGTC...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TCCTCAACTGTAGTGTACACTTTTGCCCATCTGGAAGGTACTATAGCTTCAGTGCCACTAGTAGAAACCTaGTTGTTTCTCCCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: SSTVVYTFAHLEGTIASVPLVET*LFLPQD
Trigger: ATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG...CACTGAAGCTATAGTACCTTCCAGATGGGCAAAAGTGTACACTACAGTTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGACGCTACATTAAACGTTaGGGGCAAGGGACTCATATT +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARRYIKR*GQGTHI
Trigger: AATATGAGTCCCTTGCCCCCAACGTTTAATGTAGCG...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGTCCTATAAGGAAGAATaGACACACCACAGGTTAGTC +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLSYKEE*THHRLV
Trigger: GACTAACCTGTGGTGTGTCCATTCTTCCTTATAGGA...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGATTATCCATCCATGACTaGGTTCCCCTATTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRLSIHD*VPLFPN
Trigger: ATTTGGGAATAGGGGAACCCAGTCATGGATGGATAA...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAAATCACCCTTTAAAGTaGGCATCTCTCACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARNHPLK*ASLTRR
Trigger: CCTTCTTGTGAGAGATGCGCACTTTAAAGGGTGATT...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCTTGGAGGCACCAGAATaGTGGGAGAAGCAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFLEAPE*WEKQWN
Trigger: ATTCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAA...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGAAAACCCCACTTGAGGTaGTATTTCAGCCAAACTTTA +
Preference number: 4 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRKPHLR*YFSQTL
Trigger: TAAAGTTTGGCTGAAATAGCACCTCAAGTGGGGTTT...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCTCACTGCTGGGCATTTaGAGTGGAATGGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFSLLGI*SGMALG
Trigger: TCCCAAAGCCATTCCACTGCAAATGCCCAGCAGTGA...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTGTGGATCATCATTTTTaGCTCTTTCTTTACTCCCTC +
Preference number: 4 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFVDHHF*LFLYSL
Trigger: GAGGGAGTAAAGAAAGAGCCAAAAATGATGATCCAC...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGCTTTCCAGAATTCAGTaGAAGTTACCAGGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLLSRIQ*KLPGWK
Trigger: TTTCCAACCTGGTAACTTCCACTGAATTCTGGAAAG...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTAAGTGGAAGGTGATTTaGTCTAAACTAATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFKWKVI*SKLIGL
Trigger: CAGACCAATTAGTTTAGATCAAATCACCTTCCACTT...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR TCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAAAATGCTTGCAAGTTTaGCAACAGGTAAAGGCACAT +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARKCLQV*QQVKAH
Trigger: ATGTGCCTTTACCTGTTGTCAAACTTGCAAGCATTT...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR GCA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGATGTAGTGTACACTTTTaGCCATCTGGAAGGTACTAT +
Preference number: 4 (lower is better)
Translates to: MERYCGITGTAGIASPARCSVHF*PSGRYY
Trigger: ATAGTACCTTCCAGATGGGCAAAAGTGTACACTACA...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CCA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGGGATCTAGGTTTAACTaGAGAACTAATAAAGAAACC +
Preference number: 4 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLGSRFN*RTNKET
Trigger: GGTTTCTTTATTAGTTCTCCAGTTAAACCTAGATCC...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS GCA 90 bp CGGACCGGGAGGTTCCGCGCGCCGCGGCGTTCCGTGTTGTGGCGTTaGCCCGCCGGTACGGGCCTCCTTGAACCCTTGACTTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: RTGRFRAPRRSVLWR*PAGTGLLEPLTFSG
Trigger: GCCTGAGAAAGTCAAGGGTTCAAGGAGGCCCGTACCGGCGGGGCAACGCCACAACACGGAACGCCGCGGCGCGCGGAACCTCCCGGTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CCA 90 bp AGGCCTCGGACCGGGAGGTTCCGCGCGCCGCGGCGTTCCGTGTTGTaGCGTTGCCCCGCCGGTACGGGCCTCCTTGAACCCTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: RPRTGRFRAPRRSVL*RCPAGTGLLEPLTF
Trigger: GAAAGTCAAGGGTTCAAGGAGGCCCGTACCGGCGGGGCAACGCCACAACACGGAACGCCGCGGCGCGCGGAACCTCCCGGTCCGAGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS TCA 90 bp CCTTGCATGCTGTATCTTTGGAAGCTCGGGGCTGGCCAGCAGGCCTaGGCACCGGACTCAGGCTGGGAAGGCTCTACCACACGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PCMLYLWKLGAGQQA*APDSGWEGSTTREP
Trigger: GGGCTCCCGTGTGGTAGAGCCTTCCCAGCCTGAGTCCGGTGCTCAGGCCTGCTGGCCAGCCCCGAGCTTCCAAAGATACAGCATGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 90 bp TGGTTTCATTCGAGGTTTCGGGCCGGTGAGTGTCACTCCCGGCGCTaGGAGCATATTGCTGCTTTTGCCCCGCCGCTGCCGCGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: WFHSRFRAGECHSRR*EHIAAFAPPLPRAL
Trigger: GAGCGCCCGCGGCAGCGGCGGGGCAAAAGCAGCAATATGCTCTCAGCGCCGGGAGTGACACTCACCGGCCCGAAACCTCGAATGAAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS TCA 90 bp CCGCCGCCCCCGGAGCTGCTGGTTTCATTCGAGGTTTCGGGCCGGTaGGTGTCACTCCCGGCGCTGAGAGCATATTGCTGCTTTTGCCCC +
Preference number: 5 (lower is better)
Translates to: PPPPELLVSFEVSGR*VSLPALRAYCCFCP
Trigger: GGGGCAAAAGCAGCAATATGCTCTCAGCGCCGGGAGTGACACTCACCGGCCCGAAACCTCGAATGAAACCAGCAGCTCCGGGGGCGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CCA 90 bp CCGTGCCTCCTCCCCTTGCATGCTGTATCTTTGGAAGCTCGGGGCTaGCCAGCAGGCCTGAGCACCGGACTCAGGCTGGGAAGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: PCLLPLHAVSLEARG*PAGLSTGLRLGRLY
Trigger: GTAGAGCCTTCCCAGCCTGAGTCCGGTGCTCAGGCCTGCTGGCCAGCCCCGAGCTTCCAAAGATACAGCATGCAAGGGGAGGAGGCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 90 bp GACTCGGCAGCAGCGTCTCGCGTCATCAGTGACAGCCCCGATCCTTaGTACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: DSAAASRVISDSPDP*YVCVALPGAVASSL
Trigger: CAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAACGTAGCAAGGATCGGGGCTGTCACTGATGACGCGAGACGCTGCTGCCGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS-3UTR CAA 90 bp CTGCTCGGCGTGTGCAAATCCTCTGCCTGCTCACGGCGGCGAGGCGAGGCTCTGCCAGCGGCTGAGTACTaGAATGATGTGGCAATTGCC +
Preference number: 5 (lower is better)
Translates to: LLGVCKSSACSRRRGEALPAAEY*NDVAIA
Trigger: GGCAATTGCCACATCATTCAAGTACTCAGCCGCTGG...CAGAGCCTCGCCTCGCCGCCGTGAGCAGGCAGAGGATTTGCACACGCCGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS TCA 90 bp CCGTGTTGTGGCGTTGCCCCGCCGGTACGGGCCTCCTTGAACCCTTaGCTTTCTCAGGCTGCGATCTTTGAGGGCTCATTCAGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PCCGVAPPVRASLNP*LSQAAIFEGSFREP
Trigger: AGGCTCCCTGAATGAGCCCTCAAAGATCGCAGCCTGAGAAAGTCAAGGGTTCAAGGAGGCCCGTACCGGCGGGGCAACGCCACAACACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS TCA 90 bp GCGGCGTTCCGTGTTGTGGCGTTGCCCCGCCGGTACGGGCCTCCTTaGACCCTTGACTTTCTCAGGCTGCGATCTTTGAGGGCTCATTCA +
Preference number: 5 (lower is better)
Translates to: AAFRVVALPRRYGPP*TLDFLRLRSLRAHS
Trigger: TGAATGAGCCCTCAAAGATCGCAGCCTGAGAAAGTCAAGGGTTCAAGGAGGCCCGTACCGGCGGGGCAACGCCACAACACGGAACGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS GCA 90 bp GCCGATGGCAGGGCAGAGAGAAGAGTTGTGTCGTCCGCCCAGGGCTaGAAGAGGACCAACCCTGGCCATATACAAAGAAGGGGTGCTCGG +
Preference number: 5 (lower is better)
Translates to: ADGRAERRVVSSAQG*KRTNPGHIQRRGAR
Trigger: CCGAGCACCCCTTCTTTGTATATGGCCAGGGTTGGTCCTCTTGCAGCCCTGGGCGGACGACACAACTCTTCTCTCTGCCCTGCCATCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 90 bp GCGTCATCAGTGACAGCCCCGATCCTTGCTACGTTTGCGTCGCTCTaGCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGG +
Preference number: 5 (lower is better)
Translates to: ASSVTAPILATFASL*QEQSPPPWQIVLGR
Trigger: CCTGCCGAGGACTATTTGCCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAACGTAGCAAGGATCGGGGCTGTCACTGATGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS-3UTR CAA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCAGGGGACCCAGCTGGCTaGGGGGAGCACAGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHAGDPAG*GEHSWP
Trigger: AGGCCAGCTGTGCTCCCCCAAGCCAGCTGGGTCCCC...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS TCA 90 bp CCGCATTGGAACGCCCTTCAATGGACAGCTTTACCTCCTGTGGAATaGAAGAGGGACGGAGCAGCGCAGCCCGTGCCTCCTCCCCTTGCA +
Preference number: 5 (lower is better)
Translates to: PHWNALQWTALPPVE*KRDGAAQPVPPPLA
Trigger: TGCAAGGGGAGGAGGCACGGGCTGCGCTGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTGTCCATTGAAGGGCGTTCCAATGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 90 bp CTTTACCTCCTGTGGAATGAAAGAGGGACGGAGCAGCGCAGCCCGTaGCTCCTCCCCTTGCATGCTGTATCTTTGGAAGCTCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LYLLWNERGTEQRSP*LLPLHAVSLEARGW
Trigger: CCAGCCCCGAGCTTCCAAAGATACAGCATGCAAGGGGAGGAGGCACGGGCTGCGCTGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 90 bp GCAGCGTCTCGCGTCATCAGTGACAGCCCCGATCCTTGCTACGTTTaGGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGT +
Preference number: 5 (lower is better)
Translates to: AASRVISDSPDPCYV*VALPGAVASSLANS
Trigger: ACTATTTGCCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAACGTAGCAAGGATCGGGGCTGTCACTGATGACGCGAGACGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS-3UTR CAA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCGGCACCAGGTTGCCATaGGCTACAACCATTGCTTTG +
Preference number: 5 (lower is better)
Translates to: FTLNPEGALPPGPRAARSGTRLP*ATTIAL
Trigger: CAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCC...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCCTCTTATTTCCAACCTaGGGGCCTCCTGCCCTTCTA +
Preference number: 5 (lower is better)
Translates to: FTLNPEGALPPGPRAARSLLFPT*GPPALL
Trigger: TAGAAGGGCAGGAGGCCCCAAGGTTGGAAATAAGAG...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS TCA 90 bp TGTCCTCCATTTGCAGCAGCTGCTTCCAGAGCAGACTGGCTCTCCTaGGGGGTAAGAACTGGGCTGGCACCTGCTGGAGGGGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: CPPFAAAASRADWLS*GVRTGLAPAGGVSC
Trigger: GCATGAAACCCCTCCAGCAGGTGCCAGCCCAGTTCTTACCCCTCAGGAGAGCCAGTCTGCTCTGGAAGCAGCTGCTGCAAATGGAGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 90 bp TTTTCCCGCATTGGAACGCCCTTCAATGGACAGCTTTACCTCCTGTaGAATGAAAGAGGGACGGAGCAGCGCAGCCCGTGCCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: FSRIGTPFNGQLYLL*NERGTEQRSPCLLP
Trigger: GGGGAGGAGGCACGGGCTGCGCTGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTGTCCATTGAAGGGCGTTCCAATGCGGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 90 bp CGACCGGAAGCTTCCTTTCAGTTTCAGGGGTCCAGTCCCAGGCTGTaGGTGTTGAGAAGAGAAGACAGAGAAGCTGGGCCAGGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: RPEASFQFQGSSPRL*VLRREDREAGPGEA
Trigger: GGCCTCTCCTGGCCCAGCTTCTCTGTCTTCTCTTCTCAACACCCACAGCCTGGGACTGGACCCCTGAAACTGAAAGGAAGCTTCCGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CCA 90 bp CCAGGATCTCCGAGCCCACAGGCAGCAGGCCTGAGTCAGTTCCAGTaGGCACCAGGTTGCCATTGGCTACAACCATTGCTTTGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: PGSPSPQAAGLSQFQ*APGCHWLQPLLWVK
Trigger: CTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCCTGCTGCCTGTGGGCTCGGAGATCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS-3UTR CAA 90 bp AGACCTCAGAGGTTTGGACTCCTGATGCCAGGCCAGGTCTCGGCCAATCCAAGTGTGGCAGAGGGAGCTTaGTTAAATGAGTGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: RPQRFGLLMPGQVSANPSVAEGA*LNEWAG
Trigger: CCCGGCCCACTCATTTAACAAAGCTCCCTCTGCCAC...ACTTGGATTGGCCGAGACCTGGCCTGGCATCAGGAGTCCAAACCTCTGAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGAGACAAATCCAGGCCATaGGCTCTCCTGAATGTCCAC +
Preference number: 5 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGDKSRP*ALLNVH
Trigger: GTGGACATTCAGGAGAGCCAATGGCCTGGATTTGTC...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCACCCTGGCCTTCACCCTaGCTGTTGGGGGAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSPWPSP*LLGESR
Trigger: CCTTGACTCCCCCAACAGCAAGGGTGAAGGCCAGGG...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp TTCACTCTGAACCCTGAAGGGGCTCTCCCTCCGGGCCCCCGTGCTGCTAGAAGCCAAAAACTAGAGGTCTaGGTCAGAGTGGACAAAACC +
Preference number: 5 (lower is better)
Translates to: FTLNPEGALPPGPRAARSQKLEV*VRVDKT
Trigger: GGTTTTGTCCACTCTGACCAAGACCTCTAGTTTTTG...GCTTCTAGCAGCACGGGGGCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS TCA 90 bp CCGGTGTGCTGGTGCTGCTACCTCTACCCGTGGAGTCTGAGAACCTaGAAACAACTGTCCATCCACCACACATTCTACCACTGGCACCAG +
Preference number: 5 (lower is better)
Translates to: PVCWCCYLYPWSLRT*KQLSIHHTFYHWHQ
Trigger: CTGGTGCCAGTGGTAGAATGTGTGGTGGATGGACAGTTGTTTTCAGGTTCTCAGACTCCACGGGTAGAGGTAGCAGCACCAGCACACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 90 bp CTCTGTAAACTGATAGAGATGCAGACATCTCCCACCTGTAGCCGATaGCAGGGCAGAGAGAAGAGTTGTGTCGTCCGCCCAGGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LCKLIEMQTSPTCSR*QGREKSCVVRPGLQ
Trigger: TTGCAGCCCTGGGCGGACGACACAACTCTTCTCTCTGCCCTGCCATCGGCTACAGGTGGGAGATGTCTGCATCTCTATCAGTTTACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 90 bp CCACCACACATTCTACCACTGGCACCAGTCCCTGGCCTTCACCCTTaGTGTTGGGGGAGTCAAGGGCTTCACTTTCCCGTCTTACTAAAT +
Preference number: 5 (lower is better)
Translates to: PPHILPLAPVPGLHP*CWGSQGLHFPVLLN
Trigger: ATTTAGTAAGACGGGAAAGTGAAGCCCTTGACTCCCCCAACAGCAAGGGTGAAGGCCAGGGACTGGTGCCAGTGGTAGAATGTGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS-3UTR CAA 90 bp AGGATGCCATGGGGTAATGAACAACAGATCCTGCCTTGGGAGGCTGACTTCATGAGCCTGGACTTTCTCTaGCAGGAGCTAGGGATGGGG +
Preference number: 5 (lower is better)
Translates to: RMPWGNEQQILPWEADFMSLDFL*QELGMG
Trigger: CCCCATCCCTAGCTCCTGCAAGAGAAAGTCCAGGCT...CATGAAGTCAGCCTCCCAAGGCAGGATCTGTTGTTCATTACCCCATGGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGAAGGACCAGCCCAGATaGGCTGGGGGCCCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLKDQPR*AGGPPS
Trigger: TGAGGGAGGGCCCCCAGCCAATCTGGGCTGGTCCTT...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS GCA 90 bp CCTCTCCTTTTTGGCAGATACAGATCACTTGGATTCAGTCGAGTTTaGTTTGCTCCGTGGGAACTGCACCAGAGCTGGAGGTGGGAACGC +
Preference number: 5 (lower is better)
Translates to: PLLFGRYRSLGFSRV*FAPWELHQSWRWER
Trigger: GCGTTCCCACCTCCAGCTCTGGTGCAGTTCCCACGGAGCAAAGCAAACTCGACTGAATCCAAGTGATCTGTATCTGCCAAAAAGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569119.1
CDS-3UTR CAA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTCCTTCACCCTTGCTGTaGGGGGAGTCAAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: KLASGSDTNQILKHSRSGPSPLL*GESRAS
Trigger: TGAAGCCCTTGACTCCCCCAACAGCAAGGGTGAAGG...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp TGGTGGTGGGAGGGGATGGCTTGGAGGCACCAGAATGCTGGGAGAAGCAGTGGACATTGGCTACAACCATaGCTTTGGGTAAAGGTCTAT +
Preference number: 5 (lower is better)
Translates to: WWWEGMAWRHQNAGRSSGHWLQP*LWVKVY
Trigger: ATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATG...TCCACTGCTTCTCCCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACGGCGGCGTTGGCTCCTaGTCTGGGAAGGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYGGVGS*SGKVAL
Trigger: CAGAGCCACCTTCCCAGACAAGGAGCCAACGCCGCC...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGGTGGGAGGGGATGGCTaGGAGGCACCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLVGGDG*EAPECW
Trigger: CCAGCATTCTGGTGCCTCCAAGCCATCCCCTCCCAC...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCAGGTCAGCAACCTCCTTaGATGGACCCCCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSGQQPP*MDPQKL
Trigger: CAGCTTTTGGGGGTCCATCAAAGGAGGTTGCTGACC...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCAAGGAGAAAGCTCAGCTaGTGTCCTTGCAGACACTGC +
Preference number: 5 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHARRKLS*CPCRHC
Trigger: GCAGTGTCTGCAAGGACACAAGCTGAGCTTTCTCCT...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS GCA 90 bp AGCCCACAGGCAGCAGGCCTGAGTCAGTTCCAGTGGGCACCAGGTTaGCATTGGCTACAACCATTGCTTTGGGTAAAGGTCTATGTTTTA +
Preference number: 5 (lower is better)
Translates to: SPQAAGLSQFQWAPG*HWLQPLLWVKVYVL
Trigger: TAAAACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCCTGCTGCCTGTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 90 bp CCTTTTTGGCAGATACAGATCACTTGGATTCAGTCGAGTTTGCTTTaGTCCGTGGGAACTGCACCAGAGCTGGAGGTGGGAACGCACTCT +
Preference number: 5 (lower is better)
Translates to: PFWQIQITWIQSSLL*SVGTAPELEVGTHS
Trigger: AGAGTGCGTTCCCACCTCCAGCTCTGGTGCAGTTCCCACGGAGCAAAGCAAACTCGACTGAATCCAAGTGATCTGTATCTGCCAAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569119.1
CDS CCA 90 bp CACCTGCTGGAGGGGTTTCATGCAAAGTATACCCAGCAGGTAGCCTaGACATCTGATAATAAATGGGCATCCGACCTGGAGCAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: HLLEGFHAKYTQQVA*TSDNKWASDLEQGP
Trigger: TGGACCTTGCTCCAGGTCGGATGCCCATTTATTATCAGATGTCCAGGCTACCTGCTGGGTATACTTTGCATGAAACCCCTCCAGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 90 bp GTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTaGATAATTCGAGAGAAAAGGCACGATAAGTTGCAGTACGAGGAC +
Preference number: 5 (lower is better)
Translates to: VASSLANSPRQGPSS*IIREKRHDKLQYED
Trigger: GTCCTCGTACTGCAACTTATCGTGCCTTTTCTCTCGAATTATCCAAGAACTCGGACCCTGCCGAGGACTATTTGCCAAGGAGGAGGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS-3UTR CAA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGAGGGCAGAGAGAAGAGTaGTGTCGTCCGCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRGQREE*CRPPRA
Trigger: AGCCCTGGGCGGACGACACAACTCTTCTCTCTGCCC...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTTTGCATGCTGTATCTTaGGAAGCTCGGGGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: KLASGSDTNQILKHSRSGLHAVS*EARGWP
Trigger: TGGCCAGCCCCGAGCTTCCAAAGATACAGCATGCAA...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCAACTTGCCGAAAGTCCTaGACAGAGCAGAGATCAGAC +
Preference number: 5 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHATCRKS*TEQRSD
Trigger: GTCTGATCTCTGCTCTGTCAAGGACTTTCGGCAAGT...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTAGGCAAGAACCCAATTaGAGGCCATCTTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSRQEPN*RPSSLL
Trigger: CAGCAGTGAAGATGGCCTCAAATTGGGTTCTTGCCT...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS CCA 90 bp CAGGCAGCAGGCCTGAGTCAGTTCCAGTGGGCACCAGGTTGCCATTaGCTACAACCATTGCTTTGGGTAAAGGTCTATGTTTTACTGGTT +
Preference number: 5 (lower is better)
Translates to: QAAGLSQFQWAPGCH*LQPLLWVKVYVLLV
Trigger: AACCAGTAAAACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCCTGCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS-3UTR CAA 90 bp TCCAACCTAATAAGGTTCAGCTCCTCAACTGTAGTGTACACTTTTGCCCATCTGGGGTGGCGCAGGCACTaGGGCACAACACAGACAAAG +
Preference number: 5 (lower is better)
Translates to: SNLIRFSSSTVVYTFAHLGWRRH*GTTQTK
Trigger: CTTTGTCTGTGTTGTGCCCAAGTGCCTGCGCCACCC...CAGATGGGCAAAAGTGTACACTACAGTTGAGGAGCTGAACCTTATTAGGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp AAATGTCCTACTGCTGACAAGGGACAGGCTCTGGCCCTTGTCAACTGCTCATTCAAGATAGTCAGACATTaGGAGCCAGAGGGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: KCPTADKGQALALVNCSFKIVRH*EPEGSQ
Trigger: TTGGGAGCCCTCTGGCTCCAAATGTCTGACTATCTT...GAATGAGCAGTTGACAAGGGCCAGAGCCTGTCCCTTGTCAGCAGTAGGACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS CCA 90 bp CATGCAAAGTATACCCAGCAGGTAGCCTGGACATCTGATAATAAATaGGCATCCGACCTGGAGCAAGGTCCAGCGGCTGAGTACTTGAAT +
Preference number: 5 (lower is better)
Translates to: HAKYTQQVAWTSDNK*ASDLEQGPAAEYLN
Trigger: ATTCAAGTACTCAGCCGCTGGACCTTGCTCCAGGTCGGATGCCCATTTATTATCAGATGTCCAGGCTACCTGCTGGGTATACTTTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 90 bp CAGTTCCAGTGGGCACCAGGTTGCCATTGGCTACAACCATTGCTTTaGGTAAAGGTCTATGTTTTACTGGTTCCTGATGGGACTGAGGGT +
Preference number: 5 (lower is better)
Translates to: QFQWAPGCHWLQPLL*VKVYVLLVPDGTEG
Trigger: ACCCTCAGTCCCATCAGGAACCAGTAAAACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS-3UTR CAA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCCCGTGCCTCCTCCCCTaGCATGCTGTATCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: PLVETCLFLPQDSQTFGAPCLLP*HAVSLE
Trigger: TTCCAAAGATACAGCATGCAAGGGGAGGAGGCACGG...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp CCCAAATCTCACTGCCAAGAAAGCCATTCCCTGCTCGGCGTGTGCAAATCCTCTAAATGCAGTACAAAGTaGGCGTCTGGTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: PKSHCQESHSLLGVCKSSKCSTK*ASGSDT
Trigger: TGTGTCAGAACCAGACGCCAACTTTGTACTGCATTT...AGAGGATTTGCACACGCCGAGCAGGGAATGGCTTTCTTGGCAGTGAGATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp AGACAAGGAAAGGCAGTGCAGCTACAAATGAGGCCCAGGTCACGACACCATGCATGGTTAGACATAGGTTaGCCCCATAAGGAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: RQGKAVQLQMRPRSRHHAWLDIG*PHKEKA
Trigger: AGCTTTCTCCTTATGGGGCAAACCTATGTCTAACCA...TGCATGGTGTCGTGACCTGGGCCTCATTTGTAGCTGCACTGCCTTTCCTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGCAGGAACTGCTGGTATaGCTTCACCAGCAAGAGACA +
Preference number: 5 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKQELLV*LHQQET
Trigger: TGTCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTG...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGACCTGCACGTCCAGACTaGATGCTACCAGGATCTCCG +
Preference number: 5 (lower is better)
Translates to: MERYCGITGTAGIASPARPARPD*MLPGSP
Trigger: CGGAGATCCTGGTAGCATCAAGTCTGGACGTGCAGG...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACTTCGATGCTCACTTaGCTCTGCTGCTCACCAACC +
Preference number: 5 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLTSMLT*LCCSPT
Trigger: GGTTGGTGAGCAGCAGAGCAAAGTGAGCATCGAAGT...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp GGCCTTTTCCCAGTCAATCCATGTCCAACCCTTCATCTCCAGCGTGATCACTCAAGATGGATCCTAGAGTaGAAAGAGCAACTGACAGCT +
Preference number: 5 (lower is better)
Translates to: GLFPVNPCPTLHLQRDHSRWILE*KEQLTA
Trigger: AGCTGTCAGTTGCTCTTTCAACTCTAGGATCCATCT...TGAGTGATCACGCTGGAGATGAAGGGTTGGACATGGATTGACTGGGAAAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCTTCACTGCTGGGCATTaGCAGTGGAATGGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: PLVETCLFLPQDSQTFGAFTAGH*QWNGFG
Trigger: CCCAAAGCCATTCCACTGCAAATGCCCAGCAGTGAA...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGACCAGTGGGCACCAGGTaGCCATTGGCTACAACCATT +
Preference number: 5 (lower is better)
Translates to: MERYCGITGTAGIASPARPVGTR*PLATTI
Trigger: AATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGG...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp AAGTTGGCGTCTGGTTCTGACACAAACCAGATACTGAAGCACTCACGGTCAGGTAACTCTAGGAATGAGTaGCTCATGAAACAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: KLASGSDTNQILKHSRSGNSRNE*LMKQPE
Trigger: CTCTGGCTGTTTCATGAGCAACTCATTCCTAGAGTT...ACCTGACCGTGAGTGCTTCAGTATCTGGTTTGTGTCAGAACCAGACGCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp ATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAAGGTCAGGGCCCAACTaGCCAGGGTCCTCAAGAATT +
Preference number: 5 (lower is better)
Translates to: MERYCGITGTAGIASPARRSGPN*PGSSRI
Trigger: AATTCTTGAGGACCCTGGCAAGTTGGGCCCTGACCT...TCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACGTTCATTTTCCCGCATaGGAACGCCCTTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYVHFPA*ERPSMD
Trigger: GTCCATTGAAGGGCGTTCCAATGCGGGAAAATGAAC...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp GGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCACCAGCAAGAGACCAAGGCCTTCTCATTaGAGGGGATTCCTCAAGACT +
Preference number: 5 (lower is better)
Translates to: GTILWYYRNCWYCFTSKRPRPSH*RGFLKT
Trigger: AGTCTTGAGGAATCCCCTCAAATGAGAAGGCCTTGG...TCTCTTGCTGGTGAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp TTCCCAATACCCAGTGGAACCCCACGGTCTGAGCTGATGCTAAAAGTTGTGAAGAAAACTAAACCCCACTaGAGGTGCTATTTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: FPIPSGTPRSELMLKVVKKTKPH*RCYFSQ
Trigger: TTGGCTGAAATAGCACCTCAAGTGGGGTTTAGTTTT...CTTCACAACTTTTAGCATCAGCTCAGACCGTGGGGTTCCACTGGGTATTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp AAACTAGAGGTCTTGGTCAGAGTGGACAAAACCAACTTTGCAGACAAGGAAAGGAGGGAGGCCCTGATTTaGGAATGTTTCTTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: KLEVLVRVDKTNFADKERREALI*ECFFSC
Trigger: ACAGGAGAAGAAACATTCCAAAATCAGGGCCTCCCT...CCTTTCCTTGTCTGCAAAGTTGGTTTTGTCCACTCTGACCAAGACCTCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp GAGAAGGGGAAAGATATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGGGCATAGTTCCCTTCTaGTTTCTTCACCAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: EKGKDMIPNAVQSWRLVLGIVPF*FLHQAV
Trigger: AACAGCTTGGTGAAGAAACAAGAAGGGAACTATGCC...CAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCATATCTTTCCCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp CTTTGGGATCACAAAACTTTGAGTTCGCAATCTACCAGGGAGGGATCTAGGTTTCCTTGCAGACACTGCTaGAGCATCTACTGTGTACAT +
Preference number: 5 (lower is better)
Translates to: LWDHKTLSSQSTREGSRFPCRHC*SIYCVH
Trigger: ATGTACACAGTAGATGCTCAAGCAGTGTCTGCAAGG...AAACCTAGATCCCTCCCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp CCACTAGTAGAAACCTGCTTGTTTCTCCCTCAAGATAGTCAGACATTTGGAGCCTGGGATCACAAAACTTaGAGTTCGCAATCTACCAGG +
Preference number: 5 (lower is better)
Translates to: PLVETCLFLPQDSQTFGAWDHKT*SSQSTR
Trigger: CCTGGTAGATTGCGAACTCAAAGTTTTGTGATCCCA...GGCTCCAAATGTCTGACTATCTTGAGGGAGAAACAAGCAGGTTTCTACTAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp TTATATATGCATGGAACGATATTGTGGTATTACAGGAACTGCTGGTATTGCTTCGCTCAGCTTGTGTCCTaGCAGACACTGCTTGAGCAT +
Preference number: 5 (lower is better)
Translates to: LYMHGTILWYYRNCWYCFAQLVS*QTLLEH
Trigger: ATGCTCAAGCAGTGTCTGCAAGGACACAAGCTGAGC...GAAGCAATACCAGCAGTTCCTGTAATACCACAATATCGTTCCATGCATATATAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS-3UTR CAA 90 bp ATGATCCCAAATGCAGTACAAAGTTGGCGTCTGGTTCTGACACAAACCAGATACGCTACAACCATTGCTTaGGGTAAAGGTCTATGTTTT +
Preference number: 5 (lower is better)
Translates to: MIPNAVQSWRLVLTQTRYATTIA*GKGLCF
Trigger: AAAACATAGACCTTTACCCAAAGCAATGGTTGTAGC...GTATCTGGTTTGTGTCAGAACCAGACGCCAACTTTGTACTGCATTTGGGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427980.7
CDS GCA 90 bp AAAGCAACTTTTTGGTCTGAACACTTCAGTGCACATGAACTTTGCTaGCTATTTCTTCCAACCAGGTTCCAGTTCTTTGGATCTGAAAAG +
Preference number: 5 (lower is better)
Translates to: KATFWSEHFSAHELC*LFLPTRFQFFGSEK
Trigger: CTTTTCAGATCCAAAGAACTGGAACCTGGTTGGAAGAAATAGGCAGCAAAGTTCATGTGCACTGAAGTGTTCAGACCAAAAAGTTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565676.1
CDS TCA 90 bp TACATTCTGTTCTGTTTTTCCACTGTGACATCCCAGATATTTTCCTaGAACAAGGAATTCAAAGTGCCGGTATTACCTGAGTTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: YILFCFSTVTSQIFS*NKEFKVPVLPEFPV
Trigger: CACTGGAAACTCAGGTAATACCGGCACTTTGAATTCCTTGTTTCAGGAAAATATCTGGGATGTCACAGTGGAAAAACAGAACAGAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565676.1
CDS CCA 90 bp TCACCTTTCACAAATGCTTTTGTCCATTGTTATAAAGCAACTTTTTaGTCTGAACACTTCAGTGCACATGAACTTTGCTGCCTATTTCTT +
Preference number: 5 (lower is better)
Translates to: SPFTNAFVHCYKATF*SEHFSAHELCCLFL
Trigger: AAGAAATAGGCAGCAAAGTTCATGTGCACTGAAGTGTTCAGACCAAAAAGTTGCTTTATAACAATGGACAAAAGCATTTGTGAAAGGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565676.1
CDS CCA 72 bp ACCGGGAGGTTCCGCGCGCCGCGGCGTTCCGTGTTGTaGCGTTGCCCCGCCGGTACGGGCCTCCTTGAACCC +
Preference number: 6 (lower is better)
Translates to: TGRFRAPRRSVL*RCPAGTGLLEP
Trigger: GGGTTCAAGGAGGCCCGTACCGGCGGGGCAACGCCACAACACGGAACGCCGCGGCGCGCGGAACCTCCCGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CAA 72 bp CGGACCGGGAGGTTCCGCGCGCCGCGGCGTTCCGTGTaGTGGCGTTGCCCCGCCGGTACGGGCCTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: RTGRFRAPRRSV*WRCPAGTGLLE
Trigger: TTCAAGGAGGCCCGTACCGGCGGGGCAACGCCACAACACGGAACGCCGCGGCGCGCGGAACCTCCCGGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CAA 90 bp CCGAGGCCTCGGACCGGGAGGTTCCGCGCGCCGCGGCGTTCCGTGTaGTGGCGTTGCCCCGCCGGTACGGGCCTCCTTGAACCCTTGACT +
Preference number: 6 (lower is better)
Translates to: PRPRTGRFRAPRRSV*WRCPAGTGLLEPLT
Trigger: AGTCAAGGGTTCAAGGAGGCCCGTACCGGCGGGGCAACGCCACAACACGGAACGCCGCGGCGCGCGGAACCTCCCGGTCCGAGGCCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CAA 72 bp GGGCCGGTGAGTGTCACTCCCGGCGCTGAGAGCATATaGCTGCTTTTGCCCCGCCGCTGCCGCGGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: GPVSVTPGAESI*LLLPRRCRGRS
Trigger: CGAGCGCCCGCGGCAGCGGCGGGGCAAAAGCAGCAATATGCTCTCAGCGCCGGGAGTGACACTCACCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CAA 90 bp CGAGGTTTCGGGCCGGTGAGTGTCACTCCCGGCGCTGAGAGCATATaGCTGCTTTTGCCCCGCCGCTGCCGCGGGCGCTCGACCGGAAGC +
Preference number: 6 (lower is better)
Translates to: RGFGPVSVTPGAESI*LLLPRRCRGRSTGS
Trigger: GCTTCCGGTCGAGCGCCCGCGGCAGCGGCGGGGCAAAAGCAGCAATATGCTCTCAGCGCCGGGAGTGACACTCACCGGCCCGAAACCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS GCA 72 bp AGGTTCCGCGCGCCGCGGCGTTCCGTGTTGTGGCGTTaGCCCGCCGGTACGGGCCTCCTTGAACCCTTGACT +
Preference number: 6 (lower is better)
Translates to: RFRAPRRSVLWR*PAGTGLLEPLT
Trigger: AGTCAAGGGTTCAAGGAGGCCCGTACCGGCGGGGCAACGCCACAACACGGAACGCCGCGGCGCGCGGAACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CAA 72 bp AGTGTCACTCCCGGCGCTGAGAGCATATTGCTGCTTTaGCCCCGCCGCTGCCGCGGGCGCTCGACCGGAAGC +
Preference number: 6 (lower is better)
Translates to: SVTPGAESILLL*PRRCRGRSTGS
Trigger: GCTTCCGGTCGAGCGCCCGCGGCAGCGGCGGGGCAAAAGCAGCAATATGCTCTCAGCGCCGGGAGTGACACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CAA 90 bp ACGGAGCAGCGCAGCCCGTGCCTCCTCCCCTTGCATGCTGTATCTTaGGAAGCTCGGGGCTGGCCAGCAGGCCTGAGCACCGGACTCAGG +
Preference number: 6 (lower is better)
Translates to: TEQRSPCLLPLHAVS*EARGWPAGLSTGLR
Trigger: CCTGAGTCCGGTGCTCAGGCCTGCTGGCCAGCCCCGAGCTTCCAAAGATACAGCATGCAAGGGGAGGAGGCACGGGCTGCGCTGCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 90 bp GGGCCGGTGAGTGTCACTCCCGGCGCTGAGAGCATATTGCTGCTTTaGCCCCGCCGCTGCCGCGGGCGCTCGACCGGAAGCTTCCTTTCA +
Preference number: 6 (lower is better)
Translates to: GPVSVTPGAESILLL*PRRCRGRSTGSFLS
Trigger: TGAAAGGAAGCTTCCGGTCGAGCGCCCGCGGCAGCGGCGGGGCAAAAGCAGCAATATGCTCTCAGCGCCGGGAGTGACACTCACCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS TCA 72 bp TCGAGGTTTCGGGCCGGTGAGTGTCACTCCCGGCGCTaGGAGCATATTGCTGCTTTTGCCCCGCCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: SRFRAGECHSRR*EHIAAFAPPLP
Trigger: CGGCAGCGGCGGGGCAAAAGCAGCAATATGCTCTCAGCGCCGGGAGTGACACTCACCGGCCCGAAACCTCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS GCA 72 bp CTGGACCTCAAGGTCAGTGTCCGGGGTCCCCCGGTGTaGTGGTGCTGCTACCTCTACCCGTGGAGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: LDLKVSVRGPPV*WCCYLYPWSLR
Trigger: TCTCAGACTCCACGGGTAGAGGTAGCAGCACCAGCACACCGGGGGACCCCGGACACTGACCTTGAGGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 72 bp GGCGCTGAGAGCATATTGCTGCTTTTGCCCCGCCGCTaGCGCGGGCGCTCGACCGGAAGCTTCCTTTCAGTT +
Preference number: 6 (lower is better)
Translates to: GAESILLLLPRR*RGRSTGSFLSV
Trigger: AACTGAAAGGAAGCTTCCGGTCGAGCGCCCGCGGCAGCGGCGGGGCAAAAGCAGCAATATGCTCTCAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS GCA 72 bp GCAGCGTCTCGCGTCATCAGTGACAGCCCCGATCCTTaGTACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCC +
Preference number: 6 (lower is better)
Translates to: AASRVISDSPDP*YVCVALPGAVA
Trigger: GGCGACTGCTCCTGGCAGAGCGACGCAAACGTAGCAAGGATCGGGGCTGTCACTGATGACGCGAGACGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CCA 72 bp GACCTCAAGGTCAGTGTCCGGGGTCCCCCGGTGTGCTaGTGCTGCTACCTCTACCCGTGGAGTCTGAGAACC +
Preference number: 6 (lower is better)
Translates to: DLKVSVRGPPVC*CCYLYPWSLRT
Trigger: GGTTCTCAGACTCCACGGGTAGAGGTAGCAGCACCAGCACACCGGGGGACCCCGGACACTGACCTTGAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp CCGCTCACTTCGGCACTGCGCACAAAATCCTGGGTCTaGAGGTCCTCCACCCGCTTCAGCTCTCCCGTAGCC +
Preference number: 6 (lower is better)
Translates to: PLTSALRTKSWV*RSSTRFSSPVA
Trigger: GGCTACGGGAGAGCTGAAGCGGGTGGAGGACCTCCAGACCCAGGATTTTGTGCGCAGTGCCGAAGTGAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp CTCCCCTTGCATGCTGTATCTTTGGAAGCTCGGGGCTaGCCAGCAGGCCTGAGCACCGGACTCAGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LPLHAVSLEARG*PAGLSTGLRLG
Trigger: TCCCAGCCTGAGTCCGGTGCTCAGGCCTGCTGGCCAGCCCCGAGCTTCCAAAGATACAGCATGCAAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 90 bp TGGAATGAAAGAGGGACGGAGCAGCGCAGCCCGTGCCTCCTCCCCTaGCATGCTGTATCTTTGGAAGCTCGGGGCTGGCCAGCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: WNERGTEQRSPCLLP*HAVSLEARGWPAGL
Trigger: CAGGCCTGCTGGCCAGCCCCGAGCTTCCAAAGATACAGCATGCAAGGGGAGGAGGCACGGGCTGCGCTGCTCCGTCCCTCTTTCATTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 72 bp TGCTACCAGGATCTCCGAGCCCACAGGCAGCAGGCCTaGGTCAGTTCCAGTGGGCACCAGGTTGCCATTGGC +
Preference number: 6 (lower is better)
Translates to: CYQDLRAHRQQA*VSSSGHQVAIG
Trigger: GCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCCTGCTGCCTGTGGGCTCGGAGATCCTGGTAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 72 bp GTCTGGGAAGGTGGCTCTGGCCTGCACGTCCAGACTTaGTGCTACCAGGATCTCCGAGCCCACAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: VWEGGSGLHVQT*CYQDLRAHRQQ
Trigger: CTGCTGCCTGTGGGCTCGGAGATCCTGGTAGCATCAAGTCTGGACGTGCAGGCCAGAGCCACCTTCCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 72 bp CGCGTCATCAGTGACAGCCCCGATCCTTGCTACGTTTaGGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: RVISDSPDPCYV*VALPGAVASSL
Trigger: CAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAACGTAGCAAGGATCGGGGCTGTCACTGATGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CCA 72 bp ATGAGTGGGCCGGGGAGGGAGCCTGTGGGGGAGGAGTaGCTCCTTCAGCCAGAAGTGAGGCATATGGCACAA +
Preference number: 6 (lower is better)
Translates to: MSGPGREPVGEE*LLQPEVRHMAQ
Trigger: TTGTGCCATATGCCTCACTTCTGGCTGAAGGAGCCACTCCTCCCCCACAGGCTCCCTCCCCGGCCCACTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp GGGGCGGCGTTGGCTCCTTGTCTGGGAAGGTGGCTCTaGCCTGCACGTCCAGACTTGATGCTACCAGGATCT +
Preference number: 6 (lower is better)
Translates to: GAALAPCLGRWL*PARPDLMLPGS
Trigger: AGATCCTGGTAGCATCAAGTCTGGACGTGCAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACGCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 90 bp TTGGCTCCTTGTCTGGGAAGGTGGCTCTGGCCTGCACGTCCAGACTaGATGCTACCAGGATCTCCGAGCCCACAGGCAGCAGGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: LAPCLGRWLWPARPD*MLPGSPSPQAAGLS
Trigger: ACTCAGGCCTGCTGCCTGTGGGCTCGGAGATCCTGGTAGCATCAAGTCTGGACGTGCAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 72 bp TTTGCAGCAGCTGCTTCCAGAGCAGACTGGCTCTCCTaGGGGGTAAGAACTGGGCTGGCACCTGCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: FAAAASRADWLS*GVRTGLAPAGG
Trigger: CCCTCCAGCAGGTGCCAGCCCAGTTCTTACCCCTCAGGAGAGCCAGTCTGCTCTGGAAGCAGCTGCTGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 72 bp GGCGTTGCCCCGCCGGTACGGGCCTCCTTGAACCCTTaGCTTTCTCAGGCTGCGATCTTTGAGGGCTCATTC +
Preference number: 6 (lower is better)
Translates to: GVAPPVRASLNP*LSQAAIFEGSF
Trigger: GAATGAGCCCTCAAAGATCGCAGCCTGAGAAAGTCAAGGGTTCAAGGAGGCCCGTACCGGCGGGGCAACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS TCA 72 bp CGTGTTGTGGCGTTGCCCCGCCGGTACGGGCCTCCTTaGACCCTTGACTTTCTCAGGCTGCGATCTTTGAGG +
Preference number: 6 (lower is better)
Translates to: RVVALPRRYGPP*TLDFLRLRSLR
Trigger: CCTCAAAGATCGCAGCCTGAGAAAGTCAAGGGTTCAAGGAGGCCCGTACCGGCGGGGCAACGCCACAACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS TCA 72 bp CCGGAGCTGCTGGTTTCATTCGAGGTTTCGGGCCGGTaGGTGTCACTCCCGGCGCTGAGAGCATATTGCTGC +
Preference number: 6 (lower is better)
Translates to: PELLVSFEVSGR*VSLPALRAYCC
Trigger: GCAGCAATATGCTCTCAGCGCCGGGAGTGACACTCACCGGCCCGAAACCTCGAATGAAACCAGCAGCTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS GCA 72 bp GGCGTTGGCTCCTTGTCTGGGAAGGTGGCTCTGGCCTaGACGTCCAGACTTGATGCTACCAGGATCTCCGAG +
Preference number: 6 (lower is better)
Translates to: GVGSLSGKVALA*TSRLDATRISE
Trigger: CTCGGAGATCCTGGTAGCATCAAGTCTGGACGTGCAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp CCGGCTGGCTCTTCCCCTCACTGTCACATAGCTCTCTaGATCCCAAGACCGTCCTCTCAGGCCTTTCTCGGG +
Preference number: 6 (lower is better)
Translates to: PAGSSPHCHIAL*IPRPSSQAFLG
Trigger: CCCGAGAAAGGCCTGAGAGGACGGTCTTGGGATCCAGAGAGCTATGTGACAGTGAGGGGAAGAGCCAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 72 bp TGTCTGGGAAGGTGGCTCTGGCCTGCACGTCCAGACTaGATGCTACCAGGATCTCCGAGCCCACAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: CLGRWLWPARPD*MLPGSPSPQAA
Trigger: TGCTGCCTGTGGGCTCGGAGATCCTGGTAGCATCAAGTCTGGACGTGCAGGCCAGAGCCACCTTCCCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 72 bp GTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTaGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: VCVALPGAVASS*ANSPRQGPSSW
Trigger: CCAAGAACTCGGACCCTGCCGAGGACTATTTGCCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS GCA 72 bp GTGACAGCCCCGATCCTTGCTACGTTTGCGTCGCTCTaGCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTC +
Preference number: 6 (lower is better)
Translates to: VTAPILATFASL*QEQSPPPWQIV
Trigger: GACTATTTGCCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAACGTAGCAAGGATCGGGGCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CCA 72 bp CCGAGCCCACAGGCAGCAGGCCTGAGTCAGTTCCAGTaGGCACCAGGTTGCCATTGGCTACAACCATTGCTT +
Preference number: 6 (lower is better)
Translates to: PSPQAAGLSQFQ*APGCHWLQPLL
Trigger: AAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCCTGCTGCCTGTGGGCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp TTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTaGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTGGA +
Preference number: 6 (lower is better)
Translates to: FASLCQEQSPPP*QIVLGRVRVLG
Trigger: TCCAAGAACTCGGACCCTGCCGAGGACTATTTGCCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS TCA 72 bp AACGCCCTTCAATGGACAGCTTTACCTCCTGTGGAATaGAAGAGGGACGGAGCAGCGCAGCCCGTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: NALQWTALPPVE*KRDGAAQPVPP
Trigger: AGGAGGCACGGGCTGCGCTGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTGTCCATTGAAGGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 72 bp CTGGCTCTCCTGAGGGGTAAGAACTGGGCTGGCACCTaGTGGAGGGGTTTCATGCAAAGTATACCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: LALLRGKNWAGT*WRGFMQSIPSR
Trigger: CCTGCTGGGTATACTTTGCATGAAACCCCTCCAGCAGGTGCCAGCCCAGTTCTTACCCCTCAGGAGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 72 bp TCGCTCTCGTGGTCTCTGTCCTCCATTTGCAGCAGCTaGTTCCAGAGCAGACTGGCTCTCCTGAGGGGTAAG +
Preference number: 6 (lower is better)
Translates to: SLSWSLSSICSS*FQSRLALLRGK
Trigger: CTTACCCCTCAGGAGAGCCAGTCTGCTCTGGAAGCAGCTGCTGCAAATGGAGGACAGAGACCACGAGAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 72 bp ATTCTACCACTGGCACCAGTCCCTGGCCTTCACCCTTaGTGTTGGGGGAGTCAAGGGCTTCACTTTCCCGTC +
Preference number: 6 (lower is better)
Translates to: ILPLAPVPGLHP*CWGSQGLHFPV
Trigger: GACGGGAAAGTGAAGCCCTTGACTCCCCCAACAGCAAGGGTGAAGGCCAGGGACTGGTGCCAGTGGTAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 72 bp CTGTGGAATGAAAGAGGGACGGAGCAGCGCAGCCCGTaGCTCCTCCCCTTGCATGCTGTATCTTTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: LWNERGTEQRSP*LLPLHAVSLEA
Trigger: AGCTTCCAAAGATACAGCATGCAAGGGGAGGAGGCACGGGCTGCGCTGCTCCGTCCCTCTTTCATTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 90 bp CCTTGCTACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTaGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTGGATAATTCGA +
Preference number: 6 (lower is better)
Translates to: PCYVCVALPGAVASS*ANSPRQGPSSWIIR
Trigger: TCGAATTATCCAAGAACTCGGACCCTGCCGAGGACTATTTGCCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAACGTAGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS GCA 72 bp AGGGCAGAGAGAAGAGTTGTGTCGTCCGCCCAGGGCTaGAAGAGGACCAACCCTGGCCATATACAAAGAAGG +
Preference number: 6 (lower is better)
Translates to: RAERRVVSSAQG*KRTNPGHIQRR
Trigger: CCTTCTTTGTATATGGCCAGGGTTGGTCCTCTTGCAGCCCTGGGCGGACGACACAACTCTTCTCTCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp TTCCAGAGCAGACTGGCTCTCCTGAGGGGTAAGAACTaGGCTGGCACCTGCTGGAGGGGTTTCATGCAAAGT +
Preference number: 6 (lower is better)
Translates to: FQSRLALLRGKN*AGTCWRGFMQS
Trigger: ACTTTGCATGAAACCCCTCCAGCAGGTGCCAGCCCAGTTCTTACCCCTCAGGAGAGCCAGTCTGCTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp CTGATAGAGATGCAGACATCTCCCACCTGTAGCCGATaGCAGGGCAGAGAGAAGAGTTGTGTCGTCCGCCCA +
Preference number: 6 (lower is better)
Translates to: LIEMQTSPTCSR*QGREKSCVVRP
Trigger: TGGGCGGACGACACAACTCTTCTCTCTGCCCTGCCATCGGCTACAGGTGGGAGATGTCTGCATCTCTATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp ATTGGAACGCCCTTCAATGGACAGCTTTACCTCCTGTaGAATGAAAGAGGGACGGAGCAGCGCAGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: IGTPFNGQLYLL*NERGTEQRSPC
Trigger: GCACGGGCTGCGCTGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTGTCCATTGAAGGGCGTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 72 bp GCAGCAGGCCTGAGTCAGTTCCAGTGGGCACCAGGTTaGCATTGGCTACAACCATTGCTTTGGGTAAAGGTC +
Preference number: 6 (lower is better)
Translates to: AAGLSQFQWAPG*HWLQPLLWVKV
Trigger: GACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCCTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 72 bp GTGGCACAGCATAGGGAAGGCTATAAGGAGACCCAATaGACTGCAGCGAGGTGGATGGGAGCTGAGCATAGT +
Preference number: 6 (lower is better)
Translates to: VAQHREGYKETQ*TAARWMGAEHS
Trigger: ACTATGCTCAGCTCCCATCCACCTCGCTGCAGTTCATTGGGTCTCCTTATAGCCTTCCCTATGCTGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 72 bp CGGTGTGCTGGTGCTGCTACCTCTACCCGTGGAGTCTaGGAACCTGAAAACAACTGTCCATCCACCACACAT +
Preference number: 6 (lower is better)
Translates to: RCAGAATSTRGV*EPENNCPSTTH
Trigger: ATGTGTGGTGGATGGACAGTTGTTTTCAGGTTCTCAGACTCCACGGGTAGAGGTAGCAGCACCAGCACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp TATACCCAGCAGGTAGCCTGGACATCTGATAATAAATaGGCATCCGACCTGGAGCAAGGTCCAGCGGCTGAG +
Preference number: 6 (lower is better)
Translates to: YTQQVAWTSDNK*ASDLEQGPAAE
Trigger: CTCAGCCGCTGGACCTTGCTCCAGGTCGGATGCCCATTTATTATCAGATGTCCAGGCTACCTGCTGGGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp AGATCACTTGGATTCAGTCGAGTTTGCTTTGCTCCGTaGGAACTGCACCAGAGCTGGAGGTGGGAACGCACT +
Preference number: 6 (lower is better)
Translates to: RSLGFSRVCFAP*ELHQSWRWERT
Trigger: AGTGCGTTCCCACCTCCAGCTCTGGTGCAGTTCCCACGGAGCAAAGCAAACTCGACTGAATCCAAGTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569119.1
CDS CAA 72 bp GCAGATACAGATCACTTGGATTCAGTCGAGTTTGCTTaGCTCCGTGGGAACTGCACCAGAGCTGGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: ADTDHLDSVEFA*LRGNCTRAGGG
Trigger: CCCACCTCCAGCTCTGGTGCAGTTCCCACGGAGCAAAGCAAACTCGACTGAATCCAAGTGATCTGTATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569119.1
CDS CAA 90 bp GAGCCCACAGGCAGCAGGCCTGAGTCAGTTCCAGTGGGCACCAGGTaGCCATTGGCTACAACCATTGCTTTGGGTAAAGGTCTATGTTTT +
Preference number: 6 (lower is better)
Translates to: EPTGSRPESVPVGTR*PLATTIALGKGLCF
Trigger: AAAACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCCTGCTGCCTGTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 90 bp TCCTTTTTGGCAGATACAGATCACTTGGATTCAGTCGAGTTTGCTTaGCTCCGTGGGAACTGCACCAGAGCTGGAGGTGGGAACGCACTC +
Preference number: 6 (lower is better)
Translates to: SFLADTDHLDSVEFA*LRGNCTRAGGGNAL
Trigger: GAGTGCGTTCCCACCTCCAGCTCTGGTGCAGTTCCCACGGAGCAAAGCAAACTCGACTGAATCCAAGTGATCTGTATCTGCCAAAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569119.1
CDS CAA 90 bp TCCTCTCCTTTTTGGCAGATACAGATCACTTGGATTCAGTCGAGTTaGCTTTGCTCCGTGGGAACTGCACCAGAGCTGGAGGTGGGAACG +
Preference number: 6 (lower is better)
Translates to: SSPFWQIQITWIQSS*LCSVGTAPELEVGT
Trigger: CGTTCCCACCTCCAGCTCTGGTGCAGTTCCCACGGAGCAAAGCAAACTCGACTGAATCCAAGTGATCTGTATCTGCCAAAAAGGAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569119.1
CDS CAA 90 bp CAGGGTCCGAGTTCTTGGATAATTCGAGAGAAAAGGCACGATAAGTaGCAGTACGAGGACACGGAAACGACCAGGAGAGGAGGACAGGGA +
Preference number: 6 (lower is better)
Translates to: QGPSSWIIREKRHDK*QYEDTETTRRGGQG
Trigger: TCCCTGTCCTCCTCTCCTGGTCGTTTCCGTGTCCTCGTACTGCAACTTATCGTGCCTTTTCTCTCGAATTATCCAAGAACTCGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CAA 90 bp ACAGGCAGCAGGCCTGAGTCAGTTCCAGTGGGCACCAGGTTGCCATaGGCTACAACCATTGCTTTGGGTAAAGGTCTATGTTTTACTGGT +
Preference number: 6 (lower is better)
Translates to: TGSRPESVPVGTRLP*ATTIALGKGLCFTG
Trigger: ACCAGTAAAACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCCTGCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 90 bp CTGCTGCTCACCAACCACAAAATGCAGCATGACAAATCCAGGCCATaGGCTCTCCTGAATGTCCACGACCGTGCTAGAGTCAATCTTCAG +
Preference number: 6 (lower is better)
Translates to: LLLTNHKMQHDKSRP*ALLNVHDRARVNLQ
Trigger: CTGAAGATTGACTCTAGCACGGTCGTGGACATTCAGGAGAGCCAATGGCCTGGATTTGTCATGCTGCATTTTGTGGTTGGTGAGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS GCA 72 bp TTTGGCAGATACAGATCACTTGGATTCAGTCGAGTTTaGTTTGCTCCGTGGGAACTGCACCAGAGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: FGRYRSLGFSRV*FAPWELHQSWR
Trigger: CCTCCAGCTCTGGTGCAGTTCCCACGGAGCAAAGCAAACTCGACTGAATCCAAGTGATCTGTATCTGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569119.1
CDS CCA 72 bp GGCCTGAGTCAGTTCCAGTGGGCACCAGGTTGCCATTaGCTACAACCATTGCTTTGGGTAAAGGTCTATGTT +
Preference number: 6 (lower is better)
Translates to: GLSQFQWAPGCH*LQPLLWVKVYV
Trigger: AACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 72 bp AGGCCTGAGTCAGTTCCAGTGGGCACCAGGTTGCCATaGGCTACAACCATTGCTTTGGGTAAAGGTCTATGT +
Preference number: 6 (lower is better)
Translates to: RPESVPVGTRLP*ATTIALGKGLC
Trigger: ACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 72 bp ACCAACCACAAAATGCAGCATGACAAATCCAGGCCATaGGCTCTCCTGAATGTCCACGACCGTGCTAGAGTC +
Preference number: 6 (lower is better)
Translates to: TNHKMQHDKSRP*ALLNVHDRARV
Trigger: GACTCTAGCACGGTCGTGGACATTCAGGAGAGCCAATGGCCTGGATTTGTCATGCTGCATTTTGTGGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 72 bp AAATGCAGCATGACAAATCCAGGCCATTGGCTCTCCTaGATGTCCACGACCGTGCTAGAGTCAATCTTCAGC +
Preference number: 6 (lower is better)
Translates to: KCSMTNPGHWLS*MSTTVLESIFS
Trigger: GCTGAAGATTGACTCTAGCACGGTCGTGGACATTCAGGAGAGCCAATGGCCTGGATTTGTCATGCTGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 72 bp CTTTGCTCTGCTGCTCACCAACCACAAAATGCAGCATaGCAAATCCAGGCCATTGGCTCTCCTGAATGTCCA +
Preference number: 6 (lower is better)
Translates to: LCSAAHQPQNAA*QIQAIGSPECP
Trigger: TGGACATTCAGGAGAGCCAATGGCCTGGATTTGTCATGCTGCATTTTGTGGTTGGTGAGCAGCAGAGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp GAGGGGTTTCATGCAAAGTATACCCAGCAGGTAGCCTaGACATCTGATAATAAATGGGCATCCGACCTGGAG +
Preference number: 6 (lower is better)
Translates to: EGFHAKYTQQVA*TSDNKWASDLE
Trigger: CTCCAGGTCGGATGCCCATTTATTATCAGATGTCCAGGCTACCTGCTGGGTATACTTTGCATGAAACCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CAA 72 bp TTTTGGCAGATACAGATCACTTGGATTCAGTCGAGTTaGCTTTGCTCCGTGGGAACTGCACCAGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: FWQIQITWIQSS*LCSVGTAPELE
Trigger: CTCCAGCTCTGGTGCAGTTCCCACGGAGCAAAGCAAACTCGACTGAATCCAAGTGATCTGTATCTGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569119.1
CDS CAA 90 bp CTGAGTCAGTTCCAGTGGGCACCAGGTTGCCATTGGCTACAACCATaGCTTTGGGTAAAGGTCTATGTTTTACTGGTTCCTGATGGGACT +
Preference number: 6 (lower is better)
Translates to: LSQFQWAPGCHWLQP*LWVKVYVLLVPDGT
Trigger: AGTCCCATCAGGAACCAGTAAAACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS TCA 72 bp CTTCTCCACTGTAGGTCTGCTCCAGGCACCACTCCATaGAATTCTGGTTCCATTCCTCTAAACATGCCTGTT +
Preference number: 6 (lower is better)
Translates to: LLHCRSAPGTTP*NSGSIPLNMPV
Trigger: AACAGGCATGTTTAGAGGAATGGAACCAGAATTTCATGGAGTGGTGCCTGGAGCAGACCTACAGTGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565676.1
CDS CCA 72 bp TGGGCACCAGGTTGCCATTGGCTACAACCATTGCTTTaGGTAAAGGTCTATGTTTTACTGGTTCCTGATGGG +
Preference number: 6 (lower is better)
Translates to: WAPGCHWLQPLL*VKVYVLLVPDG
Trigger: CCCATCAGGAACCAGTAAAACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427980.7
ENST00000683775.1
CDS CCA 72 bp TCCTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTaGATAATTCGAGAGAAAAGGCACGATAAGTTGCAG +
Preference number: 6 (lower is better)
Translates to: SLANSPRQGPSS*IIREKRHDKLQ
Trigger: CTGCAACTTATCGTGCCTTTTCTCTCGAATTATCCAAGAACTCGGACCCTGCCGAGGACTATTTGCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CAA 72 bp AGTTCTTGGATAATTCGAGAGAAAAGGCACGATAAGTaGCAGTACGAGGACACGGAAACGACCAGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: SSWIIREKRHDK*QYEDTETTRRG
Trigger: TCCTCTCCTGGTCGTTTCCGTGTCCTCGTACTGCAACTTATCGTGCCTTTTCTCTCGAATTATCCAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683775.1
CDS CAA 72 bp TTTCTTGTCCTCTCCTTTTTGGCAGATACAGATCACTaGGATTCAGTCGAGTTTGCTTTGCTCCGTGGGAAC +
Preference number: 6 (lower is better)
Translates to: FLVLSFLADTDH*DSVEFALLRGN
Trigger: GTTCCCACGGAGCAAAGCAAACTCGACTGAATCCAAGTGATCTGTATCTGCCAAAAAGGAGAGGACAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569119.1
CDS GCA 72 bp ACTTTTTGGTCTGAACACTTCAGTGCACATGAACTTTaGTGCCTATTTCTTCCAACCAGGTTCCAGTTCTTT +
Preference number: 6 (lower is better)
Translates to: TFWSEHFSAHEL*CLFLPTRFQFF
Trigger: AAAGAACTGGAACCTGGTTGGAAGAAATAGGCAGCAAAGTTCATGTGCACTGAAGTGTTCAGACCAAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565676.1
CDS TCA 72 bp TTCTGTTTTTCCACTGTGACATCCCAGATATTTTCCTaGAACAAGGAATTCAAAGTGCCGGTATTACCTGAG +
Preference number: 6 (lower is better)
Translates to: FCFSTVTSQIFS*NKEFKVPVLPE
Trigger: CTCAGGTAATACCGGCACTTTGAATTCCTTGTTTCAGGAAAATATCTGGGATGTCACAGTGGAAAAACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565676.1
CDS CCA 72 bp ACAAATGCTTTTGTCCATTGTTATAAAGCAACTTTTTaGTCTGAACACTTCAGTGCACATGAACTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: TNAFVHCYKATF*SEHFSAHELCC
Trigger: GCAGCAAAGTTCATGTGCACTGAAGTGTTCAGACCAAAAAGTTGCTTTATAACAATGGACAAAAGCATTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565676.1