RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATXN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124788

Ensembl transcript IDs: ENST00000244769.8, ENST00000436367.6, ENST00000467008.5, ENST00000473388.6, ENST00000479680.1, ENST00000483591.6, ENST00000483954.1, ENST00000492857.1, ENST00000495178.1, ENST00000498374.1, ENST00000642969.1, ENST00000643828.1, ENST00000646259.1, ENST00000675689.1, ENST00000676138.1

Found 1022 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGTTCCTTTCTTCCCCGGGGATGCCTGGAGCCCTGACCGCTCCTaGTGTGCCCTTCCTCCCGCCCGCTCACTGACAGACACTCGTGGA +
Preference number: 1 (lower is better)
Translates to: PVPFFPGDAWSPDRS*CALPPARSLTDTRG
Trigger: TCCACGAGTGTCTGTCAGTGAGCGGGCGGGAGGAAGGGCACAGCAGGAGCGGTCAGGGCTCCAGGCATCCCCGGGGAAGAAAGGAACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp GGAGCCCTGACCGCTCCTGCTGTGCCCTTCCTCCCGCCCGCTCACTaGCAGACACTCGTGGAAAAAGCATATGCACCAGTCTCCTGCGAC +
Preference number: 1 (lower is better)
Translates to: GALTAPAVPFLPPAH*QTLVEKAYAPVSCD
Trigger: GTCGCAGGAGACTGGTGCATATGCTTTTTCCACGAGTGTCTGTCAGTGAGCGGGCGGGAGGAAGGGCACAGCAGGAGCGGTCAGGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp TCTCCACACTCCACATTCACTATTCCGTGTGGTGACAGGGGACACTaGGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCTTTCTGCAACG +
Preference number: 1 (lower is better)
Translates to: SPHSTFTIPCGDRGH*GSSPGSPWLALSAT
Trigger: CGTTGCAGAAAGAGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGGAATAGTGAATGTGGAGTGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp CGTCTGCAAACAGGAGGCTCCTGCCCTCTGTGCGTTCTTCCTATTTaGAGAGAAAGCTGCCACAAGGGAGTGGTGACCGTGGGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: RLQTGGSCPLCVLPI*RESCHKGVVTVGGR
Trigger: CCTGCCACCCACGGTCACCACTCCCTTGTGGCAGCTTTCTCTTCAAATAGGAAGAACGCACAGAGGGCAGGAGCCTCCTGTTTGCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp GAATTTCTACCCCTGTCATCGTTAATGTTTGCTACACAGAAGCGGTaGCAGAGGCTGCTCTGGGAGCCTCGGGGCCCGCCAACGTCTGCA +
Preference number: 1 (lower is better)
Translates to: EFLPLSSLMFATQKR*QRLLWEPRGPPTSA
Trigger: TGCAGACGTTGGCGGGCCCCGAGGCTCCCAGAGCAGCCTCTGTCACCGCTTCTGTGTAGCAAACATTAACGATGACAGGGGTAGAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp GCTGAACGGCACCGAAGAATTTCTACCCCTGTCATCGTTAATGTTTaGTACACAGAAGCGGTGACAGAGGCTGCTCTGGGAGCCTCGGGG +
Preference number: 1 (lower is better)
Translates to: AERHRRISTPVIVNV*YTEAVTEAALGASG
Trigger: CCCCGAGGCTCCCAGAGCAGCCTCTGTCACCGCTTCTGTGTAGCAAACATTAACGATGACAGGGGTAGAAATTCTTCGGTGCCGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp CTTCCTCCCGCCCGCTCACTGACAGACACTCGTGGAAAAAGCATATaGACCAGTCTCCTGCGACACACCTGCTGTAACTCTAATGACAAG +
Preference number: 1 (lower is better)
Translates to: LPPARSLTDTRGKSI*TSLLRHTCCNSNDK
Trigger: CTTGTCATTAGAGTTACAGCAGGTGTGTCGCAGGAGACTGGTGCATATGCTTTTTCCACGAGTGTCTGTCAGTGAGCGGGCGGGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp CATTCCTTGAAATTGTACAACCCTACTCCAGAGCAGTCAAAGTGCTaGTTCTGGACACGTCAGTGTACCACACACACACCTGCCCCGTCC +
Preference number: 1 (lower is better)
Translates to: HSLKLYNPTPEQSKC*FWTRQCTTHTPAPS
Trigger: GGACGGGGCAGGTGTGTGTGTGGTACACTGACGTGTCCAGAAGCAGCACTTTGACTGCTCTGGAGTAGGGTTGTACAATTTCAAGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp ATTGGGCCATGGAGTCTGCTGGCCCTGTTTTCACCTGGTGCAAATTaGAGTGCAAAGGGTTTCAGAAGGCAACAGACCAGTCTGTTGAGC +
Preference number: 1 (lower is better)
Translates to: IGPWSLLALFSPGAN*SAKGFRRQQTSLLS
Trigger: GCTCAACAGACTGGTCTGTTGCCTTCTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp GCCATGGAGTCTGCTGGCCCTGTTTTCACCTGGTGCAAATTGAAGTaGAAAGGGTTTCAGAAGGCAACAGACCAGTCTGTTGAGCTGCTT +
Preference number: 1 (lower is better)
Translates to: AMESAGPVFTWCKLK*KGFQKATDQSVELL
Trigger: AAGCAGCTCAACAGACTGGTCTGTTGCCTTCTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp GAGTCTCAGAGATGGCTCTGGAGCCAGGACTCCACTGGCTGGAAATaGAGACTGTCTAATCTGAAGGTCACCACAAATACTGACAGGACT +
Preference number: 1 (lower is better)
Translates to: ESQRWLWSQDSTGWK*RLSNLKVTTNTDRT
Trigger: AGTCCTGTCAGTATTTGTGGTGACCTTCAGATTAGACAGTCTTCATTTCCAGCCAGTGGAGTCCTGGCTCCAGAGCCATCTCTGAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp AAACCGAATTGGGCCATGGAGTCTGCTGGCCCTGTTTTCACCTGGTaGAAATTGAAGTGCAAAGGGTTTCAGAAGGCAACAGACCAGTCT +
Preference number: 1 (lower is better)
Translates to: KPNWAMESAGPVFTW*KLKCKGFQKATDQS
Trigger: AGACTGGTCTGTTGCCTTCTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGCCCAATTCGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp TCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTaGTGGCCCTGTTTTCACCTGGTGCAAATTGAAGTGCAAAGGGTT +
Preference number: 1 (lower is better)
Translates to: SFHITTEETELGHGV*WPCFHLVQIEVQRV
Trigger: AACCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp CTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATaGCAGAAACACAACACTGTCCGTGGAAAAGAGAGGAAACCAACC +
Preference number: 1 (lower is better)
Translates to: LSSGVEVCKLFGVSL*QKHNTVRGKERKPT
Trigger: GGTTGGTTTCCTCTCTTTTCCACGGACAGTGTTGTGTTTCTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 90 bp AAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCTGTTTTCACCTaGTGCAAATTGAAGTGCAAAGGGTTTCAGAAGGCAACAGACCAG +
Preference number: 1 (lower is better)
Translates to: KKPNWAMESAGPVFT*CKLKCKGFQKATDQ
Trigger: CTGGTCTGTTGCCTTCTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGCCCAATTCGGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 90 bp TTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTaGCCCTGTTTTCACCTGGTGCAAATTGAAGTGCAAAGGGTTTCA +
Preference number: 1 (lower is better)
Translates to: FHITTEETELGHGVC*PCFHLVQIEVQRVS
Trigger: TGAAACCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 90 bp CTTTCGGCTGACACTAATTTGGGTTTAGAGTTGAGCAGTTCAGGCTaGGGAGATGAGGAAACCCCGCCAAAAAGGGCAGTATTCACAGAA +
Preference number: 1 (lower is better)
Translates to: LSADTNLGLELSSSG*GDEETPPKRAVFTE
Trigger: TTCTGTGAATACTGCCCTTTTTGGCGGGGTTTCCTCATCTCCCCAGCCTGAACTGCTCAACTCTAAACCCAAATTAGTGTCAGCCGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp GGCAGTTTGCATCTACCTCTTGGGAGTGAAGTCAATGCAATAACCTaGTTGGTTTTCCTAACACTGCACAGAAACCAGCGTGGGTGTTCG +
Preference number: 1 (lower is better)
Translates to: GSLHLPLGSEVNAIT*LVFLTLHRNQRGCS
Trigger: CGAACACCCACGCTGGTTTCTGTGCAGTGTTAGGAAAACCAATCAGGTTATTGCATTGACTTCACTCCCAAGAGGTAGATGCAAACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp AAGCCCGGCCTTCGGTACCGAGAGCTCTGCTTCCTCACCCATATCTaGAATAGCACGGTATTAGTGTCTTCAAAAGCATTGGAGATTTTT +
Preference number: 1 (lower is better)
Translates to: KPGLRYRELCFLTHI*NSTVLVSSKALEIF
Trigger: AAAAATCTCCAATGCTTTTGAAGACACTAATACCGTGCTATTTCAGATATGGGTGAGGAAGCAGAGCTCTCGGTACCGAAGGCCGGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp TTCCCTCCCGCCATTACACAGGAGAAAGTTAGCTACCAGAACAGTTaGCTTCAACGAGAAGGGAGGGGACGAGATTCTGAATTTAAGAAT +
Preference number: 1 (lower is better)
Translates to: FPPAITQEKVSYQNS*LQREGRGRDSEFKN
Trigger: ATTCTTAAATTCAGAATCTCGTCCCCTCCCTTCTCGTTGAAGGCAACTGTTCTGGTAGCTAACTTTCTCCTGTGTAATGGCGGGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp CCCTTTTCTCTCAGTTTCTCTGCCAACTCTGCATATGCCTTGAACTaGTTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTA +
Preference number: 1 (lower is better)
Translates to: PFSLSFSANSAYALN*FSDIKVKSASRQVV
Trigger: TACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTCAAGGCATATGCAGAGTTGGCAGAGAAACTGAGAGAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp GGGTGCTTAATATCCCCACAGCTGTCCAGTTTCCACTGTCCGGCTTaGTTTTTGGACAGGAATACTATTCTGAGAAGATGCTCCGTATTT +
Preference number: 1 (lower is better)
Translates to: GCLISPQLSSFHCPA*FLDRNTILRRCSVF
Trigger: AAATACGGAGCATCTTCTCAGAATAGTATTCCTGTCCAAAAATCAAGCCGGACAGTGGAAACTGGACAGCTGTGGGGATATTAAGCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp ATACAGTTGAACCATTTGTATGCAAGTCATGGGGACATGAAAAACTaGAGCCGGTGTTCCCTCCCGCCATTACACAGGAGAAAGTTAGCT +
Preference number: 1 (lower is better)
Translates to: IQLNHLYASHGDMKN*SRCSLPPLHRRKLA
Trigger: AGCTAACTTTCTCCTGTGTAATGGCGGGAGGGAACACCGGCTTCAGTTTTTCATGTCCCCATGACTTGCATACAAATGGTTCAACTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp CGAGGTCATCTATGTAAAAGAAATCTCAGCTCCGGAGTAGAGGTGTaGAAGTTGTTTGGAGTTTCCCTATGCCAGAAACACAACACTGTC +
Preference number: 1 (lower is better)
Translates to: RGHLCKRNLSSGVEV*KLFGVSLCQKHNTV
Trigger: GACAGTGTTGTGTTTCTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATTTCTTTTACATAGATGACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 90 bp CTCTGCATATGCCTTGAACTGATTCTCAGACATCAAAGTGAAAAGTaGCTCCCGTCAGGTAGTACTTGGTGGTCATTTATTGTCACATAC +
Preference number: 1 (lower is better)
Translates to: LCICLELILRHQSEK*LPSGSTWWSFIVTY
Trigger: GTATGTGACAATAAATGACCACCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTCAAGGCATATGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp AACAGTACTAGAGTTCAAAGACAAAAAGATTTCGCAAACTCAACGTaGAGAGCTTCTGTTGCTCTCACTGAAGGGCAGTTTGCATCTACC +
Preference number: 1 (lower is better)
Translates to: NSTRVQRQKDFANST*RASVALTEGQFAST
Trigger: GGTAGATGCAAACTGCCCTTCAGTGAGAGCAACAGAAGCTCTTCACGTTGAGTTTGCGAAATCTTTTTGTCTTTGAACTCTAGTACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp TATCTAAGGAGTAATCCACAAGATGCAGGAAATCCAAACATTCCTTaGAATTGTACAACCCTACTCCAGAGCAGTCAAAGTGCTGCTTCT +
Preference number: 1 (lower is better)
Translates to: YLRSNPQDAGNPNIP*NCTTLLQSSQSAAS
Trigger: AGAAGCAGCACTTTGACTGCTCTGGAGTAGGGTTGTACAATTTCAAGGAATGTTTGGATTTCCTGCATCTTGTGGATTACTCCTTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 90 bp ACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATaGGTTGTAAATAGTGATATTAATGAGAACAAAGTCTATGTGGCA +
Preference number: 1 (lower is better)
Translates to: TRSKPKGGVCFSEST*VVNSDINENKVYVA
Trigger: TGCCACATAGACTTTGTTCTCATTAATATCACTATTTACAACTCATGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGCAACCCTGCACCCCTaGAGGACCCTTCCCACGGGA +
Preference number: 2 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAATLHP*RTLPTG
Trigger: TCCCGTGGGAAGGGTCCTGCAGGGGTGCAGGGTTGC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCCGCCACAGCGCCTGTaGACCCCCACATGCGTGCAA +
Preference number: 2 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAPPQRL*TPTCVQ
Trigger: TTGCACGCATGTGGGGGTGCACAGGCGCTGTGGCGG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGCACCCCCACATGCGTaGAACCCTGCACCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPAPPHA*NPAPLQ
Trigger: CTGCAGGGGTGCAGGGTTGCACGCATGTGGGGGTGC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCCGCCACAGCGCCTGTaGACCCCCACATGCGTGCAA +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPPPQRL*TPTCVQ
Trigger: TTGCACGCATGTGGGGGTGCACAGGCGCTGTGGCGG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGCAGCAGGGGAAAGGTaGGAGGCTCTCTCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAAAGER*EALSLL
Trigger: CAGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTACATGCGTGCAACCCTaGACCCCTGCAGGACCCTTC +
Preference number: 2 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLATCVQP*TPAGPF
Trigger: GAAGGGTCCTGCAGGGGTGCAGGGTTGCACGCATGT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCTCCCGCCCGCTCACTaGCAGACACTCGTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPLPPAH*QTLVEK
Trigger: TTTTTCCACGAGTGTCTGTCAGTGAGCGGGCGGGAG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAGAAGGCAGGCACTGTaGAGCCCCGTTCCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPRRQAL*SPVPFF
Trigger: GAAGAAAGGAACGGGGCTTCACAGTGCCTGCCTTCT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTACCACAACACCCTGGTaGCATCGCTGCACTAGTAAA +
Preference number: 2 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLATTTPW*HRCTSK
Trigger: TTTACTAGTGCAGCGATGTCACCAGGGTGTTGTGGT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCTCCTGCGACACACCTaGTGTAACTCTAATGACAAG +
Preference number: 2 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLALLRHT*CNSNDK
Trigger: CTTGTCATTAGAGTTACAGCAGGTGTGTCGCAGGAG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTATGCACCAGTCTCCTaGGACACACCTGCTGTAACT +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPYAPVS*DTPAVT
Trigger: AGTTACAGCAGGTGTGTCGCAGGAGACTGGTGCATA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCTGCTCTGGCCAGAATaGGGAAGATCAACCAAACAA +
Preference number: 2 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLALLWPE*GRSTKQ
Trigger: TTGTTTGGTTGATCTTCCCCATTCTGGCCAGAGCAG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCTGCTCTGGCCAGAATaGGGAAGATCAACCAAACAA +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPLLWPE*GRSTKQ
Trigger: TTGTTTGGTTGATCTTCCCCATTCTGGCCAGAGCAG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTCCAAATCTGCCATCTaGCGCGTCTCCGCGATGCCC +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLASKSAI*RVSAMP
Trigger: GGGCATCGCGGAGACGCGTCAGATGGCAGATTTGGA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCACATGCGTGCAACCCTaGACCCCTGCAGGACCCTTC +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLATCVQP*TPAGPF
Trigger: GAAGGGTCCTGCAGGGGTGCAGGGTTGCACGCATGT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTAGAACAAAGTCTATGTaGCAGCCCGTATTCCTCTTA +
Preference number: 2 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLARTKSM*QPVFLL
Trigger: TAAGAGGAATACGGGCTGCCACATAGACTTTGTTCT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTACAGTACTTGTTGAATaGGAGACCAAGATGCTTGGT +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPTVLVE*ETKMLG
Trigger: ACCAAGCATCTTGGTCTCTCATTCAACAAGTACTGT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGCACCCCCACATGCGTaGAACCCTGCACCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQAPPHA*NPAPLQ
Trigger: CTGCAGGGGTGCAGGGTTGCACGCATGTGGGGGTGC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTTCCCCGGGGATGCCTaGAGCCCTGACCGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLFPGDA*SPDRSC
Trigger: GCAGGAGCGGTCAGGGCTCCAGGCATCCCCGGGGAA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCTCCAGCCCTGCTCTaGCCAGAATGGGGAAGATCA +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPPALL*PEWGRS
Trigger: TGATCTTCCCCATTCTGGCCAGAGCAGGGCTGGAGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCGTGGAAAATGGGTTaGCTCCAGGCTACATGGCTC +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPWKMG*LQATWL
Trigger: GAGCCATGTAGCCTGGAGTCAACCCATTTTCCACGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGTCAGCGCCCCCGGCTaGTTCTGTGCCGCTAGAGAA +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQVSAPG*FCAARE
Trigger: TTCTCTAGCGGCACAGAAGCAGCCGGGGGCGCTGAC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATGTCAGCGCCCCCGGCTaGTTCTGTGCCGCTAGAGAA +
Preference number: 2 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYVSAPG*FCAARE
Trigger: TTCTCTAGCGGCACAGAAGCAGCCGGGGGCGCTGAC...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTTCCCCGGGGATGCCTaGAGCCCTGACCGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWFPGDA*SPDRSC
Trigger: GCAGGAGCGGTCAGGGCTCCAGGCATCCCCGGGGAA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAACTATATAGCACACTaGTCAGACTCTATTGGCACA +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPNYIAH*SDSIGT
Trigger: TGTGCCAATAGAGTCTGACCAGTGTGCTATATAGTT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCCCCTCCACAGCCACTaGCCAACACGCTCAGAACGC +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQPLHSH*PTRSER
Trigger: GCGTTCTGAGCGTGTTGGCCAGTGGCTGTGGAGGGG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAGTGGTGACCGTGGGTaGCAGGTGGTCCCCTCCACA +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQSGDRG*QVVPST
Trigger: TGTGGAGGGGACCACCTGCCACCCACGGTCACCACT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGCTACACAGAAGCGGTaGCAGAGGCTGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQATQKR*QRLLWE
Trigger: CTCCCAGAGCAGCCTCTGTCACCGCTTCTGTGTAGC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTACAAAACCTAATAATTaGAAGTGCCCTGAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPTKPNN*KCPEQN
Trigger: ATTCTGCTCAGGGCACTTGCAATTATTAGGTTTTGT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTCTCAGACATCAAAGTaGAAAGTGCCTCCCGTCAGG +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLASQTSK*KVPPVR
Trigger: CCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTTTGTTCAGTTTAGTTaGAGCCATCCAAGTAAGAAT +
Preference number: 2 (lower is better)
Translates to: APALSIRSRGKVGGSLPPFVQFS*SHPSKN
Trigger: ATTCTTACTTGGATGGCTGCAACTAAACTGAACAAA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCCTTCCCTCCAGCCCTaGTCTGGCCAGAATGGGGAA +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLPSLQP*SGQNGE
Trigger: TTCCCCATTCTGGCCAGAGCAGGGCTGGAGGGAAGG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTTGGCTGGCTCTTTCTaGAACGTGGCGGCAGACGCA +
Preference number: 2 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYLAGSF*NVAADA
Trigger: TGCGTCTGCCGCCACGTTGCAGAAAGAGCCAGCCAA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAAGCGGTGACAGAGGCTaGTCTGGGAGCCTCGGGGCC +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTESGDRG*SGSLGA
Trigger: GGCCCCGAGGCTCCCAGAGCAGCCTCTGTCACCGCT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGAGCCCGCTAAGACCTaGCTTTTTGTGACAGATGTG +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAEPAKT*LFVTDV
Trigger: CACATCTGTCACAAAAAGCCAGGTCTTAGCGGGCTC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCCGTGGAAAATGGGTTaGCTCCAGGCTACATGGCTC +
Preference number: 2 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYPWKMG*LQATWL
Trigger: GAGCCATGTAGCCTGGAGTCAACCCATTTTCCACGG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGCCCTGACCGCTCCTaGTGTGCCCTTCCTCCCGCC +
Preference number: 2 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTSPDRS*CALPPA
Trigger: GGCGGGAGGAAGGGCACAGCAGGAGCGGTCAGGGCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGCAACCCTGCACCCCTaGAGGACCCTTCCCACGGGA +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDATLHP*RTLPTG
Trigger: TCCCGTGGGAAGGGTCCTGCAGGGGTGCAGGGTTGC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTTAACTTTCCAAATCTaGCATCTGACGCGTCTCCGC +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLALTFQI*HLTRLR
Trigger: GCGGAGACGCGTCAGATGGCAGATTTGGAAAGTTAA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGTCTCCGCGATGCCCTaGAGCTGGGTTCCTGATGTT +
Preference number: 2 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWVSAMP*SWVPDV
Trigger: AACATCAGGAACCCAGCTTCAGGGCATCGCGGAGAC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTCTACCTCTTGGGAGTaGAGTCAATGCAATAACCTG +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLASTSWE*SQCNNL
Trigger: CAGGTTATTGCATTGACTTCACTCCCAAGAGGTAGA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGACGCGTCTCCGCGATaGCCTGAAGCTGGGTTCCTG +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEDASPR*PEAGFL
Trigger: CAGGAACCCAGCTTCAGGGCATCGCGGAGACGCGTC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGGTGACAGGGGACACTaGGGTTCCTCCCCCGGGTCT +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGGDRGH*GSSPGS
Trigger: AGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAGGGGCCTGCCCACTTaGAGAAAAGACCGTGGAAAA +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQRGLPT*RKDRGK
Trigger: TTTTCCACGGTCTTTTCTGCAAGTGGGCAGGCCCCT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGCGGTGACAGAGGCTaGTCTGGGAGCCTCGGGGCC +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSGDRG*SGSLGA
Trigger: GGCCCCGAGGCTCCCAGAGCAGCCTCTGTCACCGCT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGGGGAGAAGGAGGGATaGTGCCACTTCCTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDGEKEG*CHFLVG
Trigger: CCCCACCAGGAAGTGGCAGCATCCCTCCTTCTCCCC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGCTCTTTCTGCAACGTaGCGGCAGACGCACGGGGCT +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDALSAT*RQTHGA
Trigger: AGCCCCGTGCGTCTGCCGCCACGTTGCAGAAAGAGC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 90 bp AATTGGGCCATGGAGTCTGCTGGCCCTGTTTTCACCTGGTGCAAATaGAAGTGCAAAGGGTTTCAGAAGGCAACAGACCAGTCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: NWAMESAGPVFTWCK*KCKGFQKATDQSVE
Trigger: CTCAACAGACTGGTCTGTTGCCTTCTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGCCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATCCAAATCTGCCATCTaGCGCGTCTCCGCGATGCCC +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTESKSAI*RVSAMP
Trigger: GGGCATCGCGGAGACGCGTCAGATGGCAGATTTGGA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCACAGTACTTGTTGAATaGGAGACCAAGATGCTTGGT +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLATVLVE*ETKMLG
Trigger: ACCAAGCATCTTGGTCTCTCATTCAACAAGTACTGT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCACTCTGCATATGCCTTaGACTGATTCTCAGACATCA +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLATLHMP*TDSQTS
Trigger: TGATGTCTGAGAATCAGTTCAAGGCATATGCAGAGT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCGTGGAAAAAGCATATaGACCAGTCTCCTGCGACAC +
Preference number: 2 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYRGKSI*TSLLRH
Trigger: GTGTCGCAGGAGACTGGTGCATATGCTTTTTCCACG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCTTCCCTCCAGCCCTaGTCTGGCCAGAATGGGGAA +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPSLQP*SGQNGE
Trigger: TTCCCCATTCTGGCCAGAGCAGGGCTGGAGGGAAGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGAGCAGTCAAAGTGCTaGTTCTGGACACGTCAGTGT +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQEQSKC*FWTRQC
Trigger: ACACTGACGTGTCCAGAAGCAGCACTTTGACTGCTC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCGTCAGGTAGTACTTaGTGGTCATTTATTGTCACA +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPSGST*WSFIVT
Trigger: TGTGACAATAAATGACCACCAAGTACTACCTGACGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCGGGTCTCCTTGGCTaGCTCTTTCTGCAACGTGGC +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPGLLG*LFLQRG
Trigger: GCCACGTTGCAGAAAGAGCCAGCCAAGGAGACCCGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTCTCAGACATCAAAGTaGAAAGTGCCTCCCGTCAGG +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLSQTSK*KVPPVR
Trigger: CCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACACCTGCCCCGTCCCTaGGAAAGAGGTGTGAAAGGT +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEHLPRP*ERGVKG
Trigger: ACCTTTCACACCTCTTTCTCAGGGACGGGGCAGGTG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGCTGCTTGTGGTTCATaGAACAGTAGCCATGACAAC +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQAACGS*NSSHDN
Trigger: GTTGTCATGGCTACTGTTTCATGAACCACAAGCAGC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGACGCGTCTCCGCGATaGCCTGAAGCTGGGTTCCTG +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRDASPR*PEAGFL
Trigger: CAGGAACCCAGCTTCAGGGCATCGCGGAGACGCGTC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGCTGTCGGTAAATATTaGAAAGTGGACATAGTACAG +
Preference number: 2 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAAVGKY*KVDIVQ
Trigger: CTGTACTATGTCCACTTTGCAATATTTACCGACAGC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGCTCTTTCTGCAACGTaGCGGCAGACGCACGGGGCT +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRALSAT*RQTHGA
Trigger: AGCCCCGTGCGTCTGCCGCCACGTTGCAGAAAGAGC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTCCCCCGGGTCTCCTTaGCTGGCTCTTTCTGCAACG +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGSPGSP*LALSAT
Trigger: CGTTGCAGAAAGAGCCAGCCAAGGAGACCCGGGGGA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 90 bp CAGTCTGGTAGTGCCCTCAACCCAAGTTCTGGTGTCTGTTTTCCCTaGGCCTGTGGGAGGCATATGGTGGGTAATGATCTGATATTAAAA +
Preference number: 2 (lower is better)
Translates to: QSGSALNPSSGVCFP*ACGRHMVGNDLILK
Trigger: TTTTAATATCAGATCATTACCCACCATATGCCTCCCACAGGCCAAGGGAAAACAGACACCAGAACTTGGGTTGAGGGCACTACCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCTCCCGCCCGCTCACTaGCAGACACTCGTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGLPPAH*QTLVEK
Trigger: TTTTTCCACGAGTGTCTGTCAGTGAGCGGGCGGGAG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTTCTGTTGCTCTCACTaGAGGGCAGTTTGCATCTAC +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLFCCSH*RAVCIY
Trigger: GTAGATGCAAACTGCCCTTCAGTGAGAGCAACAGAA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGCTACACAGAAGCGGTaGCAGAGGCTGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRATQKR*QRLLWE
Trigger: CTCCCAGAGCAGCCTCTGTCACCGCTTCTGTGTAGC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCTCCTGCGACACACCTaGTGTAACTCTAATGACAAG +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLLLRHT*CNSNDK
Trigger: CTTGTCATTAGAGTTACAGCAGGTGTGTCGCAGGAG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAATAAGCAGTATGACTaGAAGAATGAGCCCACCCAG +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQNKQYD*KNEPTQ
Trigger: CTGGGTGGGCTCATTCTTGCAGTCATACTGCTTATT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCCTGTTTTCACCTGGTaGAAATTGAAGTGCAAAGGG +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQPVFTW*KLKCKG
Trigger: CCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGCACAGAAACCAGCGTaGGTGTTCGCTCTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGAQKPA*VFALSL
Trigger: GAGGGAGAGAGCGAACACCCACGCTGGTTTCTGTGC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 90 bp AAAAGTGTAATTCTCTCCTTTCACATCACCACCGAAGAAACCGAATaGGGCCATGGAGTCTGCTGGCCCTGTTTTCACCTGGTGCAAATT +
Preference number: 2 (lower is better)
Translates to: KSVILSFHITTEETE*GHGVCWPCFHLVQI
Trigger: AATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAGAGAATTACACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCCTGAGAAAGAGGTGTaGAAGGTTCCGCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGPEKEV*KVPQSP
Trigger: GGGACTCTGCGGAACCTTTCACACCTCTTTCTCAGG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTTCCTCACCCATATCTaGAATAGCACGGTATTAGTG +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQFLTHI*NSTVLV
Trigger: CACTAATACCGTGCTATTTCAGATATGGGTGAGGAA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGGGGACATGAAAAACTaGAGCCGGTGTTCCCTCCCG +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRGDMKN*SRCSLP
Trigger: CGGGAGGGAACACCGGCTTCAGTTTTTCATGTCCCC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAGGGGCCTGCCCACTTaGAGAAAAGACCGTGGAAAA +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDRGLPT*RKDRGK
Trigger: TTTTCCACGGTCTTTTCTGCAAGTGGGCAGGCCCCT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTGGTGCAAATTGAAGTaGAAAGGGTTTCAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQWCKLK*KGFQKA
Trigger: TGCCTTCTGAAACCCTTTGCACTTCAATTTGCACCA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTTTGGAGTTTCCCTATaGCAGAAACACAACACTGTC +
Preference number: 2 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYFGVSL*QKHNTV
Trigger: GACAGTGTTGTGTTTCTGGCATAGGGAAACTCCAAA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAGAACAAAGTCTATGTaGCAGCCCGTATTCCTCTTA +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQRTKSM*QPVFLL
Trigger: TAAGAGGAATACGGGCTGCCACATAGACTTTGTTCT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 90 bp CATCTATGTAAAAGAAATCTCAGCTCCGGAGTAGAGGTGTGCAAGTaGTTTGGAGTTTCCCTATGCCAGAAACACAACACTGTCCGTGGA +
Preference number: 2 (lower is better)
Translates to: HLCKRNLSSGVEVCK*FGVSLCQKHNTVRG
Trigger: TCCACGGACAGTGTTGTGTTTCTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATTTCTTTTACATAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGAAGGCAGGCACTGTaGAGCCCCGTTCCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRRRQAL*SPVPFF
Trigger: GAAGAAAGGAACGGGGCTTCACAGTGCCTGCCTTCT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATACCACAACACCCTGGTaGCATCGCTGCACTAGTAAA +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDTTTPW*HRCTSK
Trigger: TTTACTAGTGCAGCGATGTCACCAGGGTGTTGTGGT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTATGCACCAGTCTCCTaGGACACACCTGCTGTAACT +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDYAPVS*DTPAVT
Trigger: AGTTACAGCAGGTGTGTCGCAGGAGACTGGTGCATA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTTTCTCTGCCAACTCTaGATATGCCTTGAACTGATT +
Preference number: 2 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQFLCQL*ICLELI
Trigger: AATCAGTTCAAGGCATATGCAGAGTTGGCAGAGAAA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACAAACAGGAGGCTCCTaGCCTCTGTGCGTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRQTGGS*PLCVLP
Trigger: AGGAAGAACGCACAGAGGGCAGGAGCCTCCTGTTTG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGTCAATGCAATAACCTaGTTGGTTTTCCTAACACTG +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLVNAIT*LVFLTL
Trigger: CAGTGTTAGGAAAACCAATCAGGTTATTGCATTGAC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTTCTGTTGCTCTCACTaGAGGGCAGTTTGCATCTAC +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDFCCSH*RAVCIY
Trigger: GTAGATGCAAACTGCCCTTCAGTGAGAGCAACAGAA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGAGATACAGTACTTGTTaGATGAGAGACCAAGATGCT +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLRYSTC*MRDQDA
Trigger: AGCATCTTGGTCTCTCATTCAACAAGTACTGTATCT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTTCAAAACCCACAAATaGTATTTCGGATCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLFKTHK*YFGSLG
Trigger: TCCCAGAGATCCGAAATATCATTTGTGGGTTTTGAA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACTGATCCTTGTAAGCTaGACGGCACCGAAGAATTTC +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTELILVS*TAPKNF
Trigger: GAAATTCTTCGGTGCCGTTCAGCTTACAAGGATCAG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGCTGCTTGTGGTTCATaGAACAGTAGCCATGACAAC +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEAACGS*NSSHDN
Trigger: GTTGTCATGGCTACTGTTTCATGAACCACAAGCAGC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTGCTACATTTATTTATaGTCGTTCAGTCCCCCAAAC +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLCYIYL*SFSPPN
Trigger: GTTTGGGGGACTGAACGAGCATAAATAAATGTAGCA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCAGAGCAGTCAAAGTaGTGCTTCTGGACACGTCAG +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPEQSK*CFWTRQ
Trigger: CTGACGTGTCCAGAAGCAGCACTTTGACTGCTCTGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTCAAAGTGCTGCTTCTaGACACGTCAGTGTACCACA +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDSKCCF*TRQCTT
Trigger: TGTGGTACACTGACGTGTCCAGAAGCAGCACTTTGA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 90 bp TTCAAAGACAAAAAGATTTCGCAAACTCAACGTGAAGAGCTTCTGTaGCTCTCACTGAAGGGCAGTTTGCATCTACCTCTTGGGAGTGAA +
Preference number: 2 (lower is better)
Translates to: FKDKKISQTQREELL*LSLKGSLHLPLGSE
Trigger: TTCACTCCCAAGAGGTAGATGCAAACTGCCCTTCAGTGAGAGCAACAGAAGCTCTTCACGTTGAGTTTGCGAAATCTTTTTGTCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTTCGCAAACTCAACGTaGAGAGCTTCTGTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGFANST*RASVAL
Trigger: GAGAGCAACAGAAGCTCTTCACGTTGAGTTTGCGAA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATCTCTGCAAGCATGCTaGGAGGGTAATGAAATTCGA +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTESLQAC*EGNEIR
Trigger: TCGAATTTCATTACCCTCTCAGCATGCTTGCAGAGA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCTGATCCTTGTAAGCTaGACGGCACCGAAGAATTTC +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGLILVS*TAPKNF
Trigger: GAAATTCTTCGGTGCCGTTCAGCTTACAAGGATCAG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCAAGTCATGGGGACATaGAAAACTGAAGCCGGTGTT +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGQVMGT*KTEAGV
Trigger: AACACCGGCTTCAGTTTTTCATGTCCCCATGACTTG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTTAACTTTCCAAATCTaGCATCTGACGCGTCTCCGC +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGLTFQI*HLTRLR
Trigger: GCGGAGACGCGTCAGATGGCAGATTTGGAAAGTTAA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATAAACTTTCAATATCTTaGTCTTCAGCAATTCTGCAG +
Preference number: 2 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYKLSIS*SSAILQ
Trigger: CTGCAGAATTGCTGAAGAGCAAGATATTGAAAGTTT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACATCAAAGTGAAAAGTaGCTCCCGTCAGGTAGTACT +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEHQSEK*LPSGST
Trigger: AGTACTACCTGACGGGAGGCACTTTTCACTTTGATG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGAGCCCGCTAAGACCTaGCTTTTTGTGACAGATGTG +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQREPAKT*LFVTDV
Trigger: CACATCTGTCACAAAAAGCCAGGTCTTAGCGGGCTC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGGCCCTGTTTTCACCTaGTGCAAATTGAAGTGCAAA +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEGPVFT*CKLKCK
Trigger: TTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGGCCCTGTTTTCACCTaGTGCAAATTGAAGTGCAAA +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDGPVFT*CKLKCK
Trigger: TTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATCTACCTCTTGGGAGTaGAGTCAATGCAATAACCTG +
Preference number: 2 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTSTSWE*SQCNNL
Trigger: CAGGTTATTGCATTGACTTCACTCCCAAGAGGTAGA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGCATATGCCTTGAACTaGTTCTCAGACATCAAAGTG +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEAYALN*FSDIKV
Trigger: CACTTTGATGTCTGAGAATCAGTTCAAGGCATATGC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTCTCTGCAAGCATGCTaGGAGGGTAATGAAATTCGA +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGSLQAC*EGNEIR
Trigger: TCGAATTTCATTACCCTCTCAGCATGCTTGCAGAGA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCATCAAAGTGAAAAGTaGCTCCCGTCAGGTAGTACT +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGHQSEK*LPSGST
Trigger: AGTACTACCTGACGGGAGGCACTTTTCACTTTGATG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTTTGTTCAGTTTAGTTaGAGCCATCCAAGTAAGAAT +
Preference number: 2 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLFVQFS*SHPSKN
Trigger: ATTCTTACTTGGATGGCTGCAACTAAACTGAACAAA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATACATGGCTCCAGAGTaGGTCTTAGAAATGAATCTG +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEYMAPE*VLEMNL
Trigger: CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGTCATCGTTAATGTTTaGTACACAGAAGCGGTGACA +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEVIVNV*YTEAVT
Trigger: TGTCACCGCTTCTGTGTAGCAAACATTAACGATGAC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGTCATCGTTAATGTTTaGTACACAGAAGCGGTGACA +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDVIVNV*YTEAVT
Trigger: TGTCACCGCTTCTGTGTAGCAAACATTAACGATGAC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCACCAGTCTGTTGAGCTaGTTGTGGTTCATGAAACAG +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGTSLLS*LWFMKQ
Trigger: CTGTTTCATGAACCACAAGCAGCTCAACAGACTGGT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATCCGGAGTAGAGGTGTaGAAGTTGTTTGGAGTTTCC +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSGVEV*KLFGVS
Trigger: GGAAACTCCAAACAACTTGCACACCTCTACTCCGGA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGCCTCCAATGTATCTaGAGTGGAAGACTTGAGTCC +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSLQCI*SGRLES
Trigger: GGACTCAAGTCTTCCACTGCAGATACATTGGAGGCT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCACTGACAGACACTCGTaGAAAAAGCATATGCACCAG +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGTDRHS*KKHMHQ
Trigger: CTGGTGCATATGCTTTTTCCACGAGTGTCTGTCAGT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAACTGACAGACACTCGTaGAAAAAGCATATGCACCAG +
Preference number: 2 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTTDRHS*KKHMHQ
Trigger: CTGGTGCATATGCTTTTTCCACGAGTGTCTGTCAGT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCGTCAGGTAGTACTTaGTGGTCATTTATTGTCACA +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPSGST*WSFIVT
Trigger: TGTGACAATAAATGACCACCAAGTACTACCTGACGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAAAGGGAAAGAAAACGTaGGTGAAGCCTCCAATGTAT +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEKGKKT*VKPPMY
Trigger: ATACATTGGAGGCTTCACCCACGTTTTCTTTCCCTT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGCAATTCTGCAGAGCTaGAATGTAGTTACAGTGTTG +
Preference number: 2 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTAILQS*NVVTVL
Trigger: CAACACTGTAACTACATTTCAGCTCTGCAGAATTGC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGCAATTCTGCAGAGCTaGAATGTAGTTACAGTGTTG +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGAILQS*NVVTVL
Trigger: CAACACTGTAACTACATTTCAGCTCTGCAGAATTGC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCACTCTGCATATGCCTTaGACTGATTCTCAGACATCA +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGTLHMP*TDSQTS
Trigger: TGATGTCTGAGAATCAGTTCAAGGCATATGCAGAGT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATTCAAAACCCACAAATaGTATTTCGGATCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEFKTHK*YFGSLG
Trigger: TCCCAGAGATCCGAAATATCATTTGTGGGTTTTGAA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATGCCAACTCTGCATATaGCTTGAACTGATTCTCAGA +
Preference number: 2 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTCQLCI*LELILR
Trigger: TCTGAGAATCAGTTCAAGGCATATGCAGAGTTGGCA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATTTCTCTGCCAACTCTaGATATGCCTTGAACTGATT +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEFLCQL*ICLELI
Trigger: AATCAGTTCAAGGCATATGCAGAGTTGGCAGAGAAA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCTAATAATTGCAAGTaGCCTGAGCAGAATATATGG +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPNNCK*PEQNIW
Trigger: CCATATATTCTGCTCAGGGCACTTGCAATTATTAGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCTAATAATTGCAAGTaGCCTGAGCAGAATATATGG +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPNNCK*PEQNIW
Trigger: CCATATATTCTGCTCAGGGCACTTGCAATTATTAGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAATTGTAAGTGGGGGTaGTTAATATCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRNCKWG*LISPQL
Trigger: CAGCTGTGGGGATATTAAGCACCCCCACTTACAATT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAACTATATAGCACACTaGTCAGACTCTATTGGCACA +
Preference number: 2 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDNYIAH*SDSIGT
Trigger: TGTGCCAATAGAGTCTGACCAGTGTGCTATATAGTT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAAAGACCGTGGAAAATaGGTTGACTCCAGGCTACAT +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRKDRGK*VDSRLH
Trigger: ATGTAGCCTGGAGTCAACCCATTTTCCACGGTCTTT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGATACAGTACTTGTTaGATGAGAGACCAAGATGCT +
Preference number: 2 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTRYSTC*MRDQDA
Trigger: AGCATCTTGGTCTCTCATTCAACAAGTACTGTATCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAGGAACAGGAAGTGCTaGAAATGTCAAACATCATCT +
Preference number: 2 (lower is better)
Translates to: GQYVILVRITVNNTSNEGRNRKC*KCQTSS
Trigger: AGATGATGTTTGACATTTTCAGCACTTCCTGTTCCT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATTTGGAGTTTCCCTATaGCAGAAACACAACACTGTC +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRFGVSL*QKHNTV
Trigger: GACAGTGTTGTGTTTCTGGCATAGGGAAACTCCAAA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGTCAATGCAATAACCTaGTTGGTTTTCCTAACACTG +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRVNAIT*LVFLTL
Trigger: CAGTGTTAGGAAAACCAATCAGGTTATTGCATTGAC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAAAACTTTCAATATCTTaGTCTTCAGCAATTCTGCAG +
Preference number: 2 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEKLSIS*SSAILQ
Trigger: CTGCAGAATTGCTGAAGAGCAAGATATTGAAAGTTT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATGCTACATTTATTTATaGTCGTTCAGTCCCCCAAAC +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRCYIYL*SFSPPN
Trigger: GTTTGGGGGACTGAACGAGCATAAATAAATGTAGCA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAACAAAACCTAATAATTaGAAGTGCCCTGAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTTKPNN*KCPEQN
Trigger: ATTCTGCTCAGGGCACTTGCAATTATTAGGTTTTGT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 90 bp TATAGTGCTACAAGAAAAGATCCTATCATCAGTAAGGTAACGTATTaGAAGCGAGGTCATCTATGTAAAAGAAATCTCAGCTCCGGAGTA +
Preference number: 2 (lower is better)
Translates to: YSATRKDPIISKVTY*KRGHLCKRNLSSGV
Trigger: TACTCCGGAGCTGAGATTTCTTTTACATAGATGACCTCGCTTCAAATACGTTACCTTACTGATGATAGGATCTTTTCTTGTAGCACTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 90 bp TTTTGTCCCCATAATGAGTCCTGTTTGATTGGTAGCCTGGATCCCTaGTTACAAACACTTCGTGTTCAAGATTATATTCTTTGGGTTTAT +
Preference number: 2 (lower is better)
Translates to: FCPHNESCLIGSLDP*LQTLRVQDYILWVY
Trigger: ATAAACCCAAAGAATATAATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGACTCATTATGGGGACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGCTACTGTTCATCTTaGACATGCAGCATTATATTG +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSYCSS*TCSIIL
Trigger: CAATATAATGCTGCATGTTCAAGATGAACAGTAGCT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAACAGGAATACTATTCTaGGAAGATGCTCCGTATTTA +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRTGILF*EDAPYL
Trigger: TAAATACGGAGCATCTTCTCAGAATAGTATTCCTGT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAATGAGAGACCAAGATaGTTGGTAATAAAGTGTGAA +
Preference number: 2 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRNERPR*LVIKCE
Trigger: TTCACACTTTATTACCAAGCATCTTGGTCTCTCATT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp ACTCGCCGCCACAGCGCCTGTGCACCCCCACATGCGTaGAACCCTGCACCCCTGCAGGACCCTTCCCACGGG +
Preference number: 3 (lower is better)
Translates to: TRRHSACAPPHA*NPAPLQDPSHG
Trigger: CCCGTGGGAAGGGTCCTGCAGGGGTGCAGGGTTGCACGCATGTGGGGGTGCACAGGCGCTGTGGCGGCGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 72 bp GGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTaGCTCTTTCTGCAACGTGGCGGCAGACGCACGGGG +
Preference number: 3 (lower is better)
Translates to: GDTAVPPPGLLG*LFLQRGGRRTG
Trigger: CCCCGTGCGTCTGCCGCCACGTTGCAGAAAGAGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 72 bp GACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTaGCTGGCTCTTTCTGCAACGTGGCGGCAGACGCAC +
Preference number: 3 (lower is better)
Translates to: DRGHCGSSPGSP*LALSATWRQTH
Trigger: GTGCGTCTGCCGCCACGTTGCAGAAAGAGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTTCCTGATGTTGATTTaGCACGTGGGAACCCCAGGA +
Preference number: 3 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAFLMLI*HVGTPG
Trigger: TCCTGGGGTTCCCACGTGCAAAATCAACATCAGGAA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCGTGAAGAGCTTCTGTaGCTCTCACTGAAGGGCAGT +
Preference number: 3 (lower is better)
Translates to: APALSIRSRGKVGGSLPPREELL*LSLKGS
Trigger: ACTGCCCTTCAGTGAGAGCAACAGAAGCTCTTCACG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp CCCCTGTCATCGTTAATGTTTGCTACACAGAAGCGGTaGCAGAGGCTGCTCTGGGAGCCTCGGGGCCCGCCA +
Preference number: 3 (lower is better)
Translates to: PLSSLMFATQKR*QRLLWEPRGPP
Trigger: TGGCGGGCCCCGAGGCTCCCAGAGCAGCCTCTGTCACCGCTTCTGTGTAGCAAACATTAACGATGACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp TTTCTCCTGACACTAGCGGGAGTCAGCGCCCCCGGCTaGTTCTGTGCCGCTAGAGAAGGCAGGCACTGTGAA +
Preference number: 3 (lower is better)
Translates to: FLLTLAGVSAPG*FCAAREGRHCE
Trigger: TTCACAGTGCCTGCCTTCTCTAGCGGCACAGAAGCAGCCGGGGGCGCTGACTCCCGCTAGTGTCAGGAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTCACTGAAGGGCAGTTaGCATCTACCTCTTGGGAGT +
Preference number: 3 (lower is better)
Translates to: APALSIRSRGKVGGSLPPSLKGS*HLPLGS
Trigger: ACTCCCAAGAGGTAGATGCAAACTGCCCTTCAGTGA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp ACCGCTCCTGCTGTGCCCTTCCTCCCGCCCGCTCACTaGCAGACACTCGTGGAAAAAGCATATGCACCAGTC +
Preference number: 3 (lower is better)
Translates to: TAPAVPFLPPAH*QTLVEKAYAPV
Trigger: GACTGGTGCATATGCTTTTTCCACGAGTGTCTGTCAGTGAGCGGGCGGGAGGAAGGGCACAGCAGGAGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp TTCCTCTCCACACTCCACATTCACTATTCCGTGTGGTaGCAGGGGACACTGCGGTTCCTCCCCCGGGTCTCC +
Preference number: 3 (lower is better)
Translates to: FLSTLHIHYSVW*QGTLRFLPRVS
Trigger: GGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGGAATAGTGAATGTGGAGTGTGGAGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp TCCACATTCACTATTCCGTGTGGTGACAGGGGACACTaGGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCTT +
Preference number: 3 (lower is better)
Translates to: STFTIPCGDRGH*GSSPGSPWLAL
Trigger: AAGAGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGGAATAGTGAATGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTACTGGTCAGACTCTATaGGCACAGAAAGTATTGCAC +
Preference number: 3 (lower is better)
Translates to: APALSIRSRGKVGGSLPPTGQTL*AQKVLH
Trigger: GTGCAATACTTTCTGTGCCAATAGAGTCTGACCAGT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 72 bp TGCCCTTCCTCCCGCCCGCTCACTGACAGACACTCGTaGAAAAAGCATATGCACCAGTCTCCTGCGACACAC +
Preference number: 3 (lower is better)
Translates to: CPSSRPLTDRHS*KKHMHQSPATH
Trigger: GTGTGTCGCAGGAGACTGGTGCATATGCTTTTTCCACGAGTGTCTGTCAGTGAGCGGGCGGGAGGAAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTAGTGAGATACAGTACTaGTTGAATGAGAGACCAAGA +
Preference number: 3 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLASEIQY*LNERPR
Trigger: TCTTGGTCTCTCATTCAACAAGTACTGTATCTCACT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp CACGTCAGTGTACCACACACACACCTGCCCCGTCCCTaGGAAAGAGGTGTGAAAGGTTCCGCAGAGTCCCTT +
Preference number: 3 (lower is better)
Translates to: HVSVPHTHLPRP*ERGVKGSAESL
Trigger: AAGGGACTCTGCGGAACCTTTCACACCTCTTTCTCAGGGACGGGGCAGGTGTGTGTGTGGTACACTGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCTCCCCCGGGTCTCCTaGGCTGGCTCTTTCTGCAAC +
Preference number: 3 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYLPRVS*AGSFCN
Trigger: GTTGCAGAAAGAGCCAGCCAAGGAGACCCGGGGGAG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTATACCCTTTCTGGGTTaGTACCAAACATTAAATCTC +
Preference number: 3 (lower is better)
Translates to: APALSIRSRGKVGGSLPPIPFLG*YQTLNL
Trigger: GAGATTTAATGTTTGGTACAAACCCAGAAAGGGTAT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp GCCCGCTCACTGACAGACACTCGTGGAAAAAGCATATaGACCAGTCTCCTGCGACACACCTGCTGTAACTCT +
Preference number: 3 (lower is better)
Translates to: ARSLTDTRGKSI*TSLLRHTCCNS
Trigger: AGAGTTACAGCAGGTGTGTCGCAGGAGACTGGTGCATATGCTTTTTCCACGAGTGTCTGTCAGTGAGCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGAGGGGCCTGCCCACTaGCAGAAAAGACCGTGGAAA +
Preference number: 3 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQEGPAH*QKRPWK
Trigger: TTTCCACGGTCTTTTCTGCAAGTGGGCAGGCCCCTC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCAAAGTGGCACCCGAGTaGTCCATAGTCATGAACTAT +
Preference number: 3 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAKVAPE*SIVMNY
Trigger: ATAGTTCATGACTATGGACAACTCGGGTGCCACTTT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTTCACCTGGTGCAAATaGAAGTGCAAAGGGTTTCAG +
Preference number: 3 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAFTWCK*KCKGFQ
Trigger: CTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp AACTTTCCAAATCTGCCATCTGACGCGTCTCCGCGATaGCCTGAAGCTGGGTTCCTGATGTTGATTTTGCAC +
Preference number: 3 (lower is better)
Translates to: NFPNLPSDASPR*PEAGFLMLILH
Trigger: GTGCAAAATCAACATCAGGAACCCAGCTTCAGGGCATCGCGGAGACGCGTCAGATGGCAGATTTGGAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp ATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTaGTGGCCCTGTTTTCACCTGGTGCAAATTGAAGTG +
Preference number: 3 (lower is better)
Translates to: ITTEETELGHGV*WPCFHLVQIEV
Trigger: CACTTCAATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 72 bp CTTTCACATCACCACCGAAGAAACCGAATTGGGCCATaGAGTCTGCTGGCCCTGTTTTCACCTGGTGCAAAT +
Preference number: 3 (lower is better)
Translates to: LSHHHRRNRIGP*SLLALFSPGAN
Trigger: ATTTGCACCAGGTGAAAACAGGGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGAGATACAGTACTTGTaGAATGAGAGACCAAGATGC +
Preference number: 3 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAEIQYL*NERPRC
Trigger: GCATCTTGGTCTCTCATTCAACAAGTACTGTATCTC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGCCCTGACTAATTTCTaGGTGATTGTGTTCCATTGT +
Preference number: 3 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAALTNF*VIVFHC
Trigger: ACAATGGAACACAATCACCAAGAAATTAGTCAGGGC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 72 bp GACACTAATTTGGGTTTAGAGTTGAGCAGTTCAGGCTaGGGAGATGAGGAAACCCCGCCAAAAAGGGCAGTA +
Preference number: 3 (lower is better)
Translates to: DTNLGLELSSSG*GDEETPPKRAV
Trigger: TACTGCCCTTTTTGGCGGGGTTTCCTCATCTCCCCAGCCTGAACTGCTCAACTCTAAACCCAAATTAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 72 bp GCAAAACATCATTCCTTCCCTAGTTCTCCTCTGTACTaGCCATGTCAGTCTGGTAGTGCCCTCAACCCAAGT +
Preference number: 3 (lower is better)
Translates to: AKHHSFPSSPLY*PCQSGSALNPS
Trigger: ACTTGGGTTGAGGGCACTACCAGACTGACATGGCCAGTACAGAGGAGAACTAGGGAAGGAATGATGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCAGTGAGATACAGTACTaGTTGAATGAGAGACCAAGA +
Preference number: 3 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLASEIQY*LNERPR
Trigger: TCTTGGTCTCTCATTCAACAAGTACTGTATCTCACT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp AGATGGCTCTGGAGCCAGGACTCCACTGGCTGGAAATaGAGACTGTCTAATCTGAAGGTCACCACAAATACT +
Preference number: 3 (lower is better)
Translates to: RWLWSQDSTGWK*RLSNLKVTTNT
Trigger: AGTATTTGTGGTGACCTTCAGATTAGACAGTCTTCATTTCCAGCCAGTGGAGTCCTGGCTCCAGAGCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp AAATTGTACAACCCTACTCCAGAGCAGTCAAAGTGCTaGTTCTGGACACGTCAGTGTACCACACACACACCT +
Preference number: 3 (lower is better)
Translates to: KLYNPTPEQSKC*FWTRQCTTHTP
Trigger: AGGTGTGTGTGTGGTACACTGACGTGTCCAGAAGCAGCACTTTGACTGCTCTGGAGTAGGGTTGTACAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp TCTGCTGGCCCTGTTTTCACCTGGTGCAAATTGAAGTaGAAAGGGTTTCAGAAGGCAACAGACCAGTCTGTT +
Preference number: 3 (lower is better)
Translates to: SAGPVFTWCKLK*KGFQKATDQSV
Trigger: AACAGACTGGTCTGTTGCCTTCTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp GGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATaGCAGAAACACAACACTGTCCGTGGAAAAGAGAGG +
Preference number: 3 (lower is better)
Translates to: GVEVCKLFGVSL*QKHNTVRGKER
Trigger: CCTCTCTTTTCCACGGACAGTGTTGTGTTTCTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 72 bp AAATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTaGAGTTTCCCTATGCCAGAAACACAACACTGTCCG +
Preference number: 3 (lower is better)
Translates to: KSQLRSRGVQVV*SFPMPETQHCP
Trigger: CGGACAGTGTTGTGTTTCTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CCA 72 bp TACTGTAAACAACACTTCCAACGAAGGCCTTCAGATTaGCCACAGAAAAGGAGACAGGCTCATTGGCCATCC +
Preference number: 3 (lower is better)
Translates to: YCKQHFQRRPSD*PQKRRQAHWPS
Trigger: GGATGGCCAATGAGCCTGTCTCCTTTTCTGTGGCCAATCTGAAGGCCTTCGTTGGAAGTGTTGTTTACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAAAGTGGCACCCGAGTaGTCCATAGTCATGAACTAT +
Preference number: 3 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQKVAPE*SIVMNY
Trigger: ATAGTTCATGACTATGGACAACTCGGGTGCCACTTT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTTCACCTGGTGCAAATaGAAGTGCAAAGGGTTTCAG +
Preference number: 3 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQFTWCK*KCKGFQ
Trigger: CTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATACCGAAGAAACCGAATaGGGCCATGGAGTCTGCTGG +
Preference number: 3 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDTEETE*GHGVCW
Trigger: CCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGTTTGCATCTACCTCTaGGGAGTGAAGTCAATGCAA +
Preference number: 3 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLVCIYL*GVKSMQ
Trigger: TTGCATTGACTTCACTCCCAAGAGGTAGATGCAAAC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGAGATACAGTACTTGTaGAATGAGAGACCAAGATGC +
Preference number: 3 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQEIQYL*NERPRC
Trigger: GCATCTTGGTCTCTCATTCAACAAGTACTGTATCTC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGAGGGGCCTGCCCACTaGCAGAAAAGACCGTGGAAA +
Preference number: 3 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQREGPAH*QKRPWK
Trigger: TTTCCACGGTCTTTTCTGCAAGTGGGCAGGCCCCTC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCGTGAAGAGCTTCTGTaGCTCTCACTGAAGGGCAGT +
Preference number: 3 (lower is better)
Translates to: GQYVILVRITVNNTSNEGREELL*LSLKGS
Trigger: ACTGCCCTTCAGTGAGAGCAACAGAAGCTCTTCACG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAGAAAAGTCAGGTATTaGTTCAGTTTAGTTGCAGCC +
Preference number: 3 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQRKVRY*FSLVAA
Trigger: GGCTGCAACTAAACTGAACAAATACCTGACTTTTCT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATATGATGATGTTCCTATaGCTCCAAACCATGTGTGTT +
Preference number: 3 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYMMMFL*LQTMCV
Trigger: AACACACATGGTTTGGAGCAATAGGAACATCATCAT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATGTGCACCGAGCTTCTaGGTAACTGCTCTGAAGACA +
Preference number: 3 (lower is better)
Translates to: SSNALTKGFTPLLGQKTECAPSF*VTALKT
Trigger: TGTCTTCAGAGCAGTTACCAAGAAGCTCGGTGCACA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp CTCAGTTTCTCTGCCAACTCTGCATATGCCTTGAACTaGTTCTCAGACATCAAAGTGAAAAGTGCCTCCCGT +
Preference number: 3 (lower is better)
Translates to: LSFSANSAYALN*FSDIKVKSASR
Trigger: ACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTCAAGGCATATGCAGAGTTGGCAGAGAAACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp CTTCGGTACCGAGAGCTCTGCTTCCTCACCCATATCTaGAATAGCACGGTATTAGTGTCTTCAAAAGCATTG +
Preference number: 3 (lower is better)
Translates to: LRYRELCFLTHI*NSTVLVSSKAL
Trigger: CAATGCTTTTGAAGACACTAATACCGTGCTATTTCAGATATGGGTGAGGAAGCAGAGCTCTCGGTACCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp ATATCCCCACAGCTGTCCAGTTTCCACTGTCCGGCTTaGTTTTTGGACAGGAATACTATTCTGAGAAGATGC +
Preference number: 3 (lower is better)
Translates to: ISPQLSSFHCPA*FLDRNTILRRC
Trigger: GCATCTTCTCAGAATAGTATTCCTGTCCAAAAATCAAGCCGGACAGTGGAAACTGGACAGCTGTGGGGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp GGAAAAAGCATATGCACCAGTCTCCTGCGACACACCTaGTGTAACTCTAATGACAAGGTTAGAACAGAAACC +
Preference number: 3 (lower is better)
Translates to: GKSICTSLLRHT*CNSNDKVRTET
Trigger: GGTTTCTGTTCTAACCTTGTCATTAGAGTTACAGCAGGTGTGTCGCAGGAGACTGGTGCATATGCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGAGAAAAGTCAGGTATTaGTTCAGTTTAGTTGCAGCC +
Preference number: 3 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLRKVRY*FSLVAA
Trigger: GGCTGCAACTAAACTGAACAAATACCTGACTTTTCT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATACATGCAGCATTATATaGCAATCTATGCGGTATCTA +
Preference number: 3 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYTCSII*QSMRYL
Trigger: TAGATACCGCATAGATTGCAATATAATGCTGCATGT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAGGTGTGCAAGTTGTTaGGAGTTTCCCTATGCCAGA +
Preference number: 3 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDRCASC*EFPYAR
Trigger: TCTGGCATAGGGAAACTCCAAACAACTTGCACACCT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGTAGAGGTGTGCAAGTaGTTTGGAGTTTCCCTATGC +
Preference number: 3 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDVEVCK*FGVSLC
Trigger: GCATAGGGAAACTCCAAACAACTTGCACACCTCTAC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp CATCTACCTCTTGGGAGTGAAGTCAATGCAATAACCTaGTTGGTTTTCCTAACACTGCACAGAAACCAGCGT +
Preference number: 3 (lower is better)
Translates to: HLPLGSEVNAIT*LVFLTLHRNQR
Trigger: ACGCTGGTTTCTGTGCAGTGTTAGGAAAACCAATCAGGTTATTGCATTGACTTCACTCCCAAGAGGTAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp CTCACTGAAGGGCAGTTTGCATCTACCTCTTGGGAGTaGAGTCAATGCAATAACCTGATTGGTTTTCCTAAC +
Preference number: 3 (lower is better)
Translates to: LTEGQFASTSWE*SQCNNLIGFPN
Trigger: GTTAGGAAAACCAATCAGGTTATTGCATTGACTTCACTCCCAAGAGGTAGATGCAAACTGCCCTTCAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp CTATGTAAAAGAAATCTCAGCTCCGGAGTAGAGGTGTaGAAGTTGTTTGGAGTTTCCCTATGCCAGAAACAC +
Preference number: 3 (lower is better)
Translates to: LCKRNLSSGVEV*KLFGVSLCQKH
Trigger: GTGTTTCTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATTTCTTTTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp GGACGAGATTCTGAATTTAAGAATTGTAAGTGGGGGTaGTTAATATCCCCACAGCTGTCCAGTTTCCACTGT +
Preference number: 3 (lower is better)
Translates to: GRDSEFKNCKWG*LISPQLSSFHC
Trigger: ACAGTGGAAACTGGACAGCTGTGGGGATATTAAGCACCCCCACTTACAATTCTTAAATTCAGAATCTCGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATTCCTGATGTTGATTTaGCACGTGGGAACCCCAGGA +
Preference number: 3 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRFLMLI*HVGTPG
Trigger: TCCTGGGGTTCCCACGTGCAAAATCAACATCAGGAA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGTTTGCATCTACCTCTaGGGAGTGAAGTCAATGCAA +
Preference number: 3 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEVCIYL*GVKSMQ
Trigger: TTGCATTGACTTCACTCCCAAGAGGTAGATGCAAAC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGTGCGTTCTTCCTATTaGAAGAGAAAGCTGCCACAA +
Preference number: 3 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEVRSSY*KRKLPQ
Trigger: TTGTGGCAGCTTTCTCTTCAAATAGGAAGAACGCAC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGTAGAGGTGTGCAAGTaGTTTGGAGTTTCCCTATGC +
Preference number: 3 (lower is better)
Translates to: GQYVILVRITVNNTSNEGVEVCK*FGVSLC
Trigger: GCATAGGGAAACTCCAAACAACTTGCACACCTCTAC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGGTAGCCTGGATCCCTaGTTACAAACACTTCGTGTT +
Preference number: 3 (lower is better)
Translates to: GQYVILVRITVNNTSNEGGSLDP*LQTLRV
Trigger: AACACGAAGTGTTTGTAACAAGGGATCCAGGCTACC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp TGCCTTGAACTGATTCTCAGACATCAAAGTGAAAAGTaGCTCCCGTCAGGTAGTACTTGGTGGTCATTTATT +
Preference number: 3 (lower is better)
Translates to: CLELILRHQSEK*LPSGSTWWSFI
Trigger: AATAAATGACCACCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTCAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR GCA 72 bp GGAAAGAAAGAACAAAAGACGGCTGTCGGTAAATATTaGAAAGTGGACATAGTACAGAGGCACATGGCTGAT +
Preference number: 3 (lower is better)
Translates to: GKKEQKTAVGKY*KVDIVQRHMAD
Trigger: ATCAGCCATGTGCCTCTGTACTATGTCCACTTTGCAATATTTACCGACAGCCGTCTTTTGTTCTTTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGAAACTTTCAATATCTaGCTCTTCAGCAATTCTGCA +
Preference number: 3 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWETFNI*LFSNSA
Trigger: TGCAGAATTGCTGAAGAGCAAGATATTGAAAGTTTC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCACTGGTCAGACTCTATaGGCACAGAAAGTATTGCAC +
Preference number: 3 (lower is better)
Translates to: GQYVILVRITVNNTSNEGTGQTL*AQKVLH
Trigger: GTGCAATACTTTCTGTGCCAATAGAGTCTGACCAGT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGGTAGCCTGGATCCCTaGTTACAAACACTTCGTGTT +
Preference number: 3 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRGSLDP*LQTLRV
Trigger: AACACGAAGTGTTTGTAACAAGGGATCCAGGCTACC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp AGAGTTCAAAGACAAAAAGATTTCGCAAACTCAACGTaGAGAGCTTCTGTTGCTCTCACTGAAGGGCAGTTT +
Preference number: 3 (lower is better)
Translates to: RVQRQKDFANST*RASVALTEGQF
Trigger: AAACTGCCCTTCAGTGAGAGCAACAGAAGCTCTTCACGTTGAGTTTGCGAAATCTTTTTGTCTTTGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGAGAGACCAAGATGCTaGGTAATAAAGTGTGAACAG +
Preference number: 3 (lower is better)
Translates to: GQYVILVRITVNNTSNEGERPRC*VIKCEQ
Trigger: CTGTTCACACTTTATTACCAAGCATCTTGGTCTCTC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp AGTAATCCACAAGATGCAGGAAATCCAAACATTCCTTaGAATTGTACAACCCTACTCCAGAGCAGTCAAAGT +
Preference number: 3 (lower is better)
Translates to: SNPQDAGNPNIP*NCTTLLQSSQS
Trigger: ACTTTGACTGCTCTGGAGTAGGGTTGTACAATTTCAAGGAATGTTTGGATTTCCTGCATCTTGTGGATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGAAACTTTCAATATCTaGCTCTTCAGCAATTCTGCA +
Preference number: 3 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRETFNI*LFSNSA
Trigger: TGCAGAATTGCTGAAGAGCAAGATATTGAAAGTTTC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR TCA 72 bp AAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATaGGTTGTAAATAGTGATATTAATGAGAACAAAGTC +
Preference number: 3 (lower is better)
Translates to: KPKGGVCFSEST*VVNSDINENKV
Trigger: GACTTTGTTCTCATTAATATCACTATTTACAACTCATGTGGACTCAGAAAAACACACACCACCTTTTGGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGGACACCGGGGTCCCTaGCTGCGGGGTGGCGTACGC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAGHRGP*LRGGVR
Trigger: GCGTACGCCACCCCGCAGCCAGGGACCCCGGTGTCC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCTCCACCGAGGTCCCTaGCGGCCCATGCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPLHRGP*RPMPPA
Trigger: GGCGGGAGGCATGGGCCGGCAGGGACCTCGGTGGAG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCCACGGGGACAGACCTaGGAGCGCTGGGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAPRGQT*ERWAGS
Trigger: ACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCGTGG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTACGCGGCAGGCAGCGTaGTGGCCACGGGGACAGACC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPTRQAA*WPRGQT
Trigger: GGTCTGTCCCCGTGGCCACCACGCTGCCTGCCGCGT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCCTCCTTGGCCTGGATaGCCTGCTGCAGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAPPWPG*PAAAGC
Trigger: GCAGCCGGCTGCAGCAGGCCATCCAGGCCAAGGAGG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTCTGGGCCTGCACCATaGCTGGGTAGGCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLASGPAP*LGRRPG
Trigger: CCCAGGCCGCCTACCCAGCCATGGTGCAGGCCCAGA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTGCGGCCGAGGCCACTaGACTGGTGACGGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPCGRGH*TGDGVG
Trigger: GCCAACCCCGTCACCAGTGCAGTGGCCTCGGCCGCA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGCCTGGATGGCCTGCTaGAGCCGGCTGCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAAWMAC*SRLLSA
Trigger: AGCTGAGAGCAGCCGGCTGCAGCAGGCCATCCAGGC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAGCCCTGACCGCTCCTaGTGTGCCCTTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPSPDRS*CALPPA
Trigger: GGCGGGAGGAAGGGCACAGCAGGAGCGGTCAGGGCT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGTAGAAGGCCGTGGCTaGCAGTCCCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAVEGRG*QSHREW
Trigger: CCACTCCCGGTGGGACTGCCAGCCACGGCCTTCTAC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCTGCGTAGAAGGCCGTaGCTGGCAGTCCCACCGGGA +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLALRRRP*LAVPPG
Trigger: TCCCGGTGGGACTGCCAGCCACGGCCTTCTACGCAG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTACCGTGGGTGGCAGGTaGTCCCCTCCACAGCCACTG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLATVGGR*SPPQPL
Trigger: CAGTGGCTGTGGAGGGGACCACCTGCCACCCACGGT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCAGGCCGTCGGCCTTTaGGTGCTTCAGCAGGACGCT +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAQAVGL*VLQQDA
Trigger: AGCGTCCTGCTGAAGCACTCAAAGGCCGACGGCCTG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCCGGAGTCGGCGTATTaGATGACGACCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAPESAY*MTTWEG
Trigger: CCCCTCCCAGGTCGTCATGCAATACGCCGACTCCGG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGACTATGGCCGGGGCTaGCCCCGACGCTTCCATGTC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPDYGRG*PRRFHV
Trigger: GACATGGAAGCGTCGGGGGCAGCCCCGGCCATAGTC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCCTCCTCTTCCTCGTTaGCGCGGGCTTGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAPPLPR*RGLAGF
Trigger: GAACCCAGCAAGCCCGCGGCAACGAGGAAGAGGAGG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGGTGACAGGGGACACTaGGGTTCCTCCCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPGDRGH*GSSPGS
Trigger: AGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTATCGTCTGGTGGGGGTaGAGGTGGACGGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPIVWWG*RWTGMA
Trigger: GGCCATCCCCGTCCACCTCCACCCCCACCAGACGAT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTACTTCAACGCTGACCTaGGCTCGGTGCTCCCCGACG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLATSTLT*ARCSPT
Trigger: CGTCGGGGAGCACCGAGCCCAGGTCAGCGTTGAAGT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGGGGAGGCTTCACGATaGGTGGCCTGTTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPGEASR*VACCTS
Trigger: GGAGGTGCAACAGGCCACTCATCGTGAAGCCTCCCC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGGGCACTCCCCTGGTTaGTTCCGTTTTCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAGHSPG*FRFPAR
Trigger: CCGAGCAGGAAAACGGAATCAACCAGGGGAGTGCCC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTGTGGGATCATCGTCTaGTGGGGGTGGAGGTGGACG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLACGIIV*WGWRWT
Trigger: CGTCCACCTCCACCCCCACCAGACGATGATCCCACA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCGGGCGTGTTGCTGTTaGGCAGGACCATCACAGAGG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLARACCC*AGPSQR
Trigger: CCTCTGTGATGGTCCTGCCCAACAGCAACACGCCCG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCACTATTCCGTGTGGTaGCAGGGGACACTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAHYSVW*QGTLRF
Trigger: GAACCGCAGTGTCCCCTGTCACCACACGGAATAGTG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTCTTGCGGCTGCTGTTaGTCTGGCTGCTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPSCGCC*SGCCST
Trigger: CGTGGAGCAGCAGCCAGAGCAACAGCAGCCGCAAGA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGCGGGATCCACGGGCTaGCCCTTTTTAACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPAGSTG*PFLTEP
Trigger: CGGCTCTGTTAAAAAGGGCCAGCCCGTGGATCCCGC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTCCCCCGGGTCTCCTTaGCTGGCTCTTTCTGCAACG +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPSPGSP*LALSAT
Trigger: CGTTGCAGAAAGAGCCAGCCAAGGAGACCCGGGGGA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCCAGGGCCTCAGGGTTaGAGTTCTCGCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPPGPQG*SSRSWE
Trigger: TTCCCAAGAGCGAGAACTTCAACCCTGAGGCCCTGG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTGGGTTCTATTTTGGTaGGGAAGGGCGCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAWVLFW*GRALQA
Trigger: TGCCTGCAGCGCCCTTCCTCACCAAAATAGAACCCA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCACCTGCCCCGTCCCTaGGAAAGAGGTGTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPHLPRP*ERGVKG
Trigger: ACCTTTCACACCTCTTTCTCAGGGACGGGGCAGGTG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCCGAAGGATCACGACTaGTGTAGTCTGAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPPKDHD*CSLRGS
Trigger: CGAGCCCCTCAGACTACAGCAGTCGTGATCCTTCGG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCCGTGGAAAATGGGTTaGCTCCAGGCTACATGGCTC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPPWKMG*LQATWL
Trigger: GAGCCATGTAGCCTGGAGTCAACCCATTTTCCACGG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGGAATCATCTCCCCGTaGGTACAATCCGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPGIISP*VQSANS
Trigger: GCTGTTGGCGGATTGTACCCACGGGGAGATGATTCC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCTCGGAGGACCGGCTaGTGGCGGGGATCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPRRTG*WRGSRA
Trigger: AGCGCGAGATCCCCGCCACCAGCCGGTCCTCCGAGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTCAGACTGCCCATGTTaGCCAGCAGAGTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLASDCPC*PAEWNR
Trigger: CCTATTCCACTCTGCTGGCCAACATGGGCAGTCTGA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTCCCCGTTGGCCAACTaGATGATGGAGCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLASPLAN*MMEPFM
Trigger: CATGAAAGGCTCCATCATCCAGTTGGCCAACGGGGA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTAACCGAATTGGGCCATaGAGTCTGCTGGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLANRIGP*SLLALF
Trigger: AAACAGGGCCAGCAGACTCCATGGCCCAATTCGGTT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTACGAGTCTCAGAGATaGCTCTGGAGCCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPYESQR*LWSQDS
Trigger: GGAGTCCTGGCTCCAGAGCCATCTCTGAGACTCGTA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTAACAAATCTGCAGCTTaGATGGACCACCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLANKSAA*MDHPGD
Trigger: GTCACCAGGGTGGTCCATTCAAGCTGCAGATTTGTT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTACCATCCGTGCAGGCTaGAATCCACTCTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLATIRAG*NPLFLS
Trigger: AGAGAGAAAGAGTGGATTTCAGCCTGCACGGATGGT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAGGTGGTTCGTCTTCTaGCTTCTCCAGTTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPRWFVF*LLQFAA
Trigger: AGCCGCAAACTGGAGAAGTCAGAAGACGAACCACCT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGAGGCAGGCATTCGTTaGTCCGCTCTTGGTTGGATT +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPEAGIR*SALGWI
Trigger: AATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTGGAGTGGTGGCCCCTaGGGCCGAGGCCACTGCACT +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAWSGGP*GRGHCT
Trigger: AGTGCAGTGGCCTCGGCCGCAGGGGCCACCACTCCA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCGGCATACCTGTGTCTaGTGCCCGCCAGGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLARHTCV*CPPGRR
Trigger: CCGACGGCCTGGCGGGCAGCAGACACAGGTATGCCG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTGGTGGGGGTGGAGGTaGACGGGGATGGCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAWWGWR*TGMAGG
Trigger: TCCTCCGGCCATCCCCGTCCACCTCCACCCCCACCA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCTCCTTGGCCTGGATaGCCTGCTGCAGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPPWPG*PAAAGC
Trigger: GCAGCCGGCTGCAGCAGGCCATCCAGGCCAAGGAGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGGCCTGCACCATGGCTaGGTAGGCGGCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAGLHHG*VGGLGD
Trigger: GTCACCCAGGCCGCCTACCCAGCCATGGTGCAGGCC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAATCAAAGAGCTGGCTaGTTCTCTCCGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPNQRAG*FSPDSR
Trigger: CCTGCTGTCCGGAGAGAACCAGCCAGCTCTTTGATT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTATCTGGGCACTCCCCTaGTTGATTCCGTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPIWALP*LIPFSC
Trigger: GCAGGAAAACGGAATCAACCAGGGGAGTGCCCAGAT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTAGGAGACAGGCTCATTaGCCATCCAGACAGCAAACA +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLARRQAH*PSRQQT
Trigger: TGTTTGCTGTCTGGATGGCCAATGAGCCTGTCTCCT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAACAAATCTGCAGCTTaGATGGACCACCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPNKSAA*MDHPGD
Trigger: GTCACCAGGGTGGTCCATTCAAGCTGCAGATTTGTT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTTCTGTTGCTCTCACTaGAGGGCAGTTTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAFCCSH*RAVCIY
Trigger: GTAGATGCAAACTGCCCTTCAGTGAGAGCAACAGAA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTTCGCAAACTCAACGTaGAGAGCTTCTGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAFANST*RASVAL
Trigger: GAGAGCAACAGAAGCTCTTCACGTTGAGTTTGCGAA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGCCACAAGGGAGTGGTaGCCGTGGGTGGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAATREW*PWVAGG
Trigger: ACCACCTGCCACCCACGGTCACCACTCCCTTGTGGC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGAAAGAAAACGTGGGTaGAGCCTCCAATGTATCTGC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAERKRG*SLQCIC
Trigger: GCAGATACATTGGAGGCTTCACCCACGTTTTCTTTC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCATACCTGTGTCTGCTaGCCGCCAGGCCGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAHTCVC*PPGRRP
Trigger: AGGCCGACGGCCTGGCGGGCAGCAGACACAGGTATG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGGGCCCGCCAACGTCTaGAAACAGGAGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAGPANV*KQEAPA
Trigger: GGCAGGAGCCTCCTGTTTGCAGACGTTGGCGGGCCC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTCCGGAGTAGAGGTGTaGAAGTTGTTTGGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLASGVEV*KLFGVS
Trigger: GGAAACTCCAAACAACTTGCACACCTCTACTCCGGA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTGTTCTGCGGAGAACTaGAAATGTGGACGTACTGGT +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLACSAEN*KCGRTG
Trigger: ACCAGTACGTCCACATTTCCAGTTCTCCGCAGAACA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTCTGAGGGGCTCGGGTaGACCACCACGTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLASEGLG*TTTCLD
Trigger: GTCCAGGCACGTGGTGGTCCACCCGAGCCCCTCAGA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCGCTCAGGTAGCCGATaGCAGGGGGTTGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLARSGSR*QGVESL
Trigger: CAGGGACTCAACCCCCTGTCATCGGCTACCTGAGCG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGGTCACCACAAATACTaGCAGGACTATCTTGAAACC +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAGHHKY*QDYLET
Trigger: GGTTTCAAGATAGTCCTGTCAGTATTTGTGGTGACC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTTTCAAGACCATCCGTaGAGGCTGAAATCCACTCTT +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAFQDHP*RLKSTL
Trigger: AAGAGTGGATTTCAGCCTGCACGGATGGTCTTGAAA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCCCGGCCACCAGGGTTaGCCGGGAGCCATGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQPGHQG*PGAMLC
Trigger: GCACAGCATGGCTCCCGGGCAACCCTGGTGGCCGGG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTTGGCCTGGATGGCCTaGTGCAGCCGGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLALAWMA*CSRLLS
Trigger: TGAGAGCAGCCGGCTGCAGCAGGCCATCCAGGCCAA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCGTCGGCCTTTGAGTaGTTCAGCAGGACGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPSAFE*FSRTLA
Trigger: CGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGACGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCTCCTCTTCCTCGTTaGCGCGGGCTTGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPPLPR*RGLAGF
Trigger: GAACCCAGCAAGCCCGCGGCAACGAGGAAGAGGAGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGGGGAGAAGGAGGGATaGTGCCACTTCCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAGEKEG*CHFLVG
Trigger: CCCCACCAGGAAGTGGCAGCATCCCTCCTTCTCCCC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCCTGTTTTCACCTGGTaGAAATTGAAGTGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAPVFTW*KLKCKG
Trigger: CCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAGCCTCCAATGTATCTaGAGTGGAAGACTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPSLQCI*SGRLES
Trigger: GGACTCAAGTCTTCCACTGCAGATACATTGGAGGCT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATGCTGGGATGGAGTGGTaGCCCCTGCGGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYAGMEW*PLRPRP
Trigger: TGGCCTCGGCCGCAGGGGCCACCACTCCATCCCAGC...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCTGGGAGCGCTGGGATaGAGTGGTGGCCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYLGALG*SGGPCG
Trigger: GCCGCAGGGGCCACCACTCCATCCCAGCGCTCCCAG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCAGTGGTGACCGTGGGTaGCAGGTGGTCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLASGDRG*QVVPST
Trigger: TGTGGAGGGGACCACCTGCCACCCACGGTCACCACT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGGCCCTGTTTTCACCTaGTGCAAATTGAAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAGPVFT*CKLKCK
Trigger: TTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTACAGTACTTGTTGAATaGGAGACCAAGATGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLATVLVE*ETKMLG
Trigger: ACCAAGCATCTTGGTCTCTCATTCAACAAGTACTGT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGCAATTCTGCAGAGCTaGAATGTAGTTACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAAILQS*NVVTVL
Trigger: CAACACTGTAACTACATTTCAGCTCTGCAGAATTGC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTCACCTGGTGCAAATTaGAGTGCAAAGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPSPGAN*SAKGFR
Trigger: TCTGAAACCCTTTGCACTTCAATTTGCACCAGGTGA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTTCCACTGTCCGGCTTaGTTTTTGGACAGGAATACT +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPFHCPA*FLDRNT
Trigger: AGTATTCCTGTCCAAAAATCAAGCCGGACAGTGGAA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCTGCAGTGGAAGACTTaGGTCCTTTCAGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLALQWKT*VLSDKK
Trigger: TTTCTTATCTGAAAGGACTCAAGTCTTCCACTGCAG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTGGATGAACATTCACTaGGTACTGTTCACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPWMNIH*VLFTGS
Trigger: GCTACCTGTGAACAGTACGCAGTGAATGTTCATCCA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGACCGGGGTCCCTGGCTaGGGGGTGGCGTACGCGGCA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWTGVPG*GVAYAA
Trigger: TGCCGCGTACGCCACCCCGCAGCCAGGGACCCCGGT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGCGTCTGGCTCAGACTaGCCATGTTGGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAASGSD*PCWPAE
Trigger: CTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCTGACTTCTCCAGTTTaGGGCTCTCTGGCGCCGACC +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLALTSPV*GSLAPT
Trigger: GGTCGGCGCCAGAGAGCCGCAAACTGGAGAAGTCAG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAATTGTAAGTGGGGGTaGTTAATATCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPNCKWG*LISPQL
Trigger: CAGCTGTGGGGATATTAAGCACCCCCACTTACAATT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCAGACCTGGGAGCGCTaGGCGGGGAGTAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYQTWER*AGSSPA
Trigger: GGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTCCCTGGCTGCGGGGTaGCGTACGCGGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSLAAG*RTRQAA
Trigger: CGCTGCCTGCCGCGTACGCCACCCCGCAGCCAGGGA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCAGGGTGAGCGTGTGTaGGATCATCGTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAQGERV*DHRLVG
Trigger: CCCCACCAGACGATGATCCCACACACGCTCACCCTG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTCCCCCGGGTCTCCTTaGCTGGCTCTTTCTGCAACG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLASPGSP*LALSAT
Trigger: CGTTGCAGAAAGAGCCAGCCAAGGAGACCCGGGGGA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGGCCCTGTTTTCACCTaGTGCAAATTGAAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPGPVFT*CKLKCK
Trigger: TTTGCACTTCAATTTGCACCAGGTGAAAACAGGGCC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAAGGTGTGCGGCAGGTaGGCGTACTGCACGGGGGAC +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQKVCGR*AYCTGD
Trigger: GTCCCCCGTGCAGTACGCTCACCTGCCGCACACCTT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCAGGCCCAGGTCGGCTaGGGACGGGGCCCCGTACCG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDQAQVG*GRGPVP
Trigger: CGGTACGGGGCCCCGTCCTCAGCCGACCTGGGCCTG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGCACTGTGTGTGGTCTaGATGACCGTGTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAALCVV*MTVWGE
Trigger: CTCACCCCACACGGTCATTCAGACCACACACAGTGC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCCGGGAGCCATGCTGTaGCCTCCACCCGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQPGAML*PPPGGC
Trigger: ACAACCACCGGGTGGAGGGCACAGCATGGCTCCCGG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGTTGCCCGGGAGCCATaGTGTGCCCTCCACCCGGTG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLVAREP*CALHPV
Trigger: CACCGGGTGGAGGGCACAGCATGGCTCCCGGGCAAC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTGGAGTGGTGGCCCCTaGGGCCGAGGCCACTGCACT +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLWSGGP*GRGHCT
Trigger: AGTGCAGTGGCCTCGGCCGCAGGGGCCACCACTCCA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGCAACCCTGCACCCCTaGAGGACCCTTCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQATLHP*RTLPTG
Trigger: TCCCGTGGGAAGGGTCCTGCAGGGGTGCAGGGTTGC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGTGCTTTCATCACAATaGAGAACCATAAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAVLSSQ*RTISYQ
Trigger: CTGATAGCTTATGGTTCTCCATTGTGATGAAAGCAC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCGGAGGACCGGCTGGTaGCGGGGATCTCGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLRRTGW*RGSRAS
Trigger: AGAAGCGCGAGATCCCCGCCACCAGCCGGTCCTCCG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCCACGGGGACAGACCTaGGAGCGCTGGGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWPRGQT*ERWAGS
Trigger: ACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCGTGG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCAATCCCATTTTCTCTaGAAACTTCAGTTCGCCATT +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAQSHFL*KLQFAI
Trigger: AATGGCGAACTGAAGTTTCCAGAGAAAATGGGATTG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCCGTCAGGTAGTACTTaGTGGTCATTTATTGTCACA +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPPSGST*WSFIVT
Trigger: TGTGACAATAAATGACCACCAAGTACTACCTGACGG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAGAACAAAGTCTATGTaGCAGCCCGTATTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPRTKSM*QPVFLL
Trigger: TAAGAGGAATACGGGCTGCCACATAGACTTTGTTCT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTAACTATATAGCACACTaGTCAGACTCTATTGGCACA +
Preference number: 4 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLANYIAH*SDSIGT
Trigger: TGTGCCAATAGAGTCTGACCAGTGTGCTATATAGTT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 72 bp CCGCGATGCCCTGAAGCTGGGTTCCTGATGTTGATTTaGCACGTGGGAACCCCAGGAGGACACTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PRCPEAGFLMLI*HVGTPGGHCSE
Trigger: TTCAGAGCAGTGTCCTCCTGGGGTTCCCACGTGCAAAATCAACATCAGGAACCCAGCTTCAGGGCATCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTATTGCTGTACAAGGATaGCAAACAAATCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPIAVQG*QTNLQL
Trigger: AAGCTGCAGATTTGTTTGTCATCCTTGTACAGCAAT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACAGGCCCAGGTCGGCTaGGGACGGGGCCCCGTACCG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTQAQVG*GRGPVP
Trigger: CGGTACGGGGCCCCGTCCTCAGCCGACCTGGGCCTG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAATGACCGTGTGGGGTaGGAGCGCGTAGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQNDRVG*ERVGPV
Trigger: CACCGGTCCTACGCGCTCTCACCCCACACGGTCATT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGTTGCCCGGGAGCCATaGTGTGCCCTCCACCCGGTG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWVAREP*CALHPV
Trigger: CACCGGGTGGAGGGCACAGCATGGCTCCCGGGCAAC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTTGGCCTGGATGGCCTaGTGCAGCCGGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYLAWMA*CSRLLS
Trigger: TGAGAGCAGCCGGCTGCAGCAGGCCATCCAGGCCAA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGAACCGACTTGCCGCCTaGCTTGCCCAGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLNRLAA*LAQAQV
Trigger: GACCTGGGCCTGGGCAAGGCAGGCGGCAAGTCGGTT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCACCTCCAGGTCAGCTaGGGGCGTGTTGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYHLQVS*GRVAVG
Trigger: CCCAACAGCAACACGCCCGCAGCTGACCTGGAGGTG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGACGCGTCTCCGCGATaGCCTGAAGCTGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQDASPR*PEAGFL
Trigger: CAGGAACCCAGCTTCAGGGCATCGCGGAGACGCGTC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTTTCTCTGCCAACTCTaGATATGCCTTGAACTGATT +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPFLCQL*ICLELI
Trigger: AATCAGTTCAAGGCATATGCAGAGTTGGCAGAGAAA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCCTAATAATTGCAAGTaGCCTGAGCAGAATATATGG +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPPNNCK*PEQNIW
Trigger: CCATATATTCTGCTCAGGGCACTTGCAATTATTAGG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGTGCTTTCATCACAATaGAGAACCATAAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPVLSSQ*RTISYQ
Trigger: CTGATAGCTTATGGTTCTCCATTGTGATGAAAGCAC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGGAATCATCTCCCCGTaGGTACAATCCGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAGIISP*VQSANS
Trigger: GCTGTTGGCGGATTGTACCCACGGGGAGATGATTCC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGAAATGTGGACGTACTaGTTCTGCTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAEMWTY*FCWAGG
Trigger: CCCACCAGCCCAGCAGAACCAGTACGTCCACATTTC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGCTTCAGCAGGACGCTaGCGGGATCCACGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWASAGR*RDPRAG
Trigger: GCCAGCCCGTGGATCCCGCCAGCGTCCTGCTGAAGC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTTGAGCAGTTCAGGCTaGGGAGATGAGGAAACCCCG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLALSSSG*GDEETP
Trigger: CGGGGTTTCCTCATCTCCCCAGCCTGAACTGCTCAA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGGGGAGGCTTCACGATaGGTGGCCTGTTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLGEASR*VACCTS
Trigger: GGAGGTGCAACAGGCCACTCATCGTGAAGCCTCCCC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCACCGGGAGTGGCTCTaGAGCACTGTGTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQHREWL*STVCGL
Trigger: CAGACCACACACAGTGCTTCAGAGCCACTCCCGGTG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATGCTGCCGACCGGGATaGGCAGGGGCTGTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTECCRPG*AGAVCR
Trigger: CCGGCACACAGCCCCTGCTCATCCCGGTCGGCAGCA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTCTCTGCACTCTGGATaGAATCTTCTGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPSLHSG*NLLFLS
Trigger: ACTTAAAAACAGAAGATTTCATCCAGAGTGCAGAGA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCCAAAACTTCAACGCTaGCCTGGGCTCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQPKLQR*PGLGAP
Trigger: GGGAGCACCGAGCCCAGGTCAGCGTTGAAGTTTTGG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTCCAAATCTGCCATCTaGCGCGTCTCCGCGATGCCC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSKSAI*RVSAMP
Trigger: GGGCATCGCGGAGACGCGTCAGATGGCAGATTTGGA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTACAGGAATACTATTCTaGGAAGATGCTCCGTATTTA +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPTGILF*EDAPYL
Trigger: TAAATACGGAGCATCTTCTCAGAATAGTATTCCTGT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCTGGGCCAGAAAACTaGAAGAGTAGGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPGPEN*KSRWFL
Trigger: CAGGAACCACCTACTCTTTCAGTTTTCTGGCCCAGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCCGGCCACCAGGGTTaGCCGGGAGCCATGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPGHQG*PGAMLC
Trigger: GCACAGCATGGCTCCCGGGCAACCCTGGTGGCCGGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACTCCACCGAGGTCCCTaGCGGCCCATGCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTLHRGP*RPMPPA
Trigger: GGCGGGAGGCATGGGCCGGCAGGGACCTCGGTGGAG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCACCGGGGTCCCTGGCTaGGGGGTGGCGTACGCGGCA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGTGVPG*GVAYAA
Trigger: TGCCGCGTACGCCACCCCGCAGCCAGGGACCCCGGT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTGCTGCTGCTGCTGCTaGTCAGCCTTGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLCCCCC*SALCPG
Trigger: GCCGGGACACAAGGCTGAGCAGCAGCAGCAGCAGCA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGCCTGGATGGCCTGCTaGAGCCGGCTGCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWAWMAC*SRLLSA
Trigger: AGCTGAGAGCAGCCGGCTGCAGCAGGCCATCCAGGC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCAGCTGCGGGCGTGTTaGTGTTGGGCAGGACCATCA +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQQLRAC*CWAGPS
Trigger: TGATGGTCCTGCCCAACAGCAACACGCCCGCAGCTG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCTGACCTGGGCTCGGTaGTCCCCGACGGCGAACTGT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWLTWAR*SPTANC
Trigger: ACAGTTCGCCGTCGGGGAGCACCGAGCCCAGGTCAG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCCGTCGGCCTTTGAGTaGTTCAGCAGGACGCTGGCG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLPSAFE*FSRTLA
Trigger: CGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGACGG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCTGACTTCTCCAGTTTaGGGCTCTCTGGCGCCGACC +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQLTSPV*GSLAPT
Trigger: GGTCGGCGCCAGAGAGCCGCAAACTGGAGAAGTCAG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATACATGCGTGCAACCCTaGACCCCTGCAGGACCCTTC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYTCVQP*TPAGPF
Trigger: GAAGGGTCCTGCAGGGGTGCAGGGTTGCACGCATGT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGCACCCCCACATGCGTaGAACCCTGCACCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWAPPHA*NPAPLQ
Trigger: CTGCAGGGGTGCAGGGTTGCACGCATGTGGGGGTGC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCCTTCCCTCCAGCCCTaGTCTGGCCAGAATGGGGAA +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYPSLQP*SGQNGE
Trigger: TTCCCCATTCTGGCCAGAGCAGGGCTGGAGGGAAGG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGGACACCGGGGTCCCTaGCTGCGGGGTGGCGTACGC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGGHRGP*LRGGVR
Trigger: GCGTACGCCACCCCGCAGCCAGGGACCCCGGTGTCC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTCTCAGCTTTCTTGGTaGCCTCCCGAGGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLASQLSW*PPEGQS
Trigger: ACTTTGTCCCTCGGGAGGCCACCAAGAAAGCTGAGA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTCTGAGGGGCTCGGGTaGACCACCACGTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSEGLG*TTTCLD
Trigger: GTCCAGGCACGTGGTGGTCCACCCGAGCCCCTCAGA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGACAGGCAGGTGGATCTaGGCCTGCACCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLTGRWI*ACTMAG
Trigger: CCCAGCCATGGTGCAGGCCCAGATCCACCTGCCTGT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCAATCAAAGAGCTGGCTaGTTCTCTCCGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLANQRAG*FSPDSR
Trigger: CCTGCTGTCCGGAGAGAACCAGCCAGCTCTTTGATT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGGCAAATCAAAGAGCTaGCTGGTTCTCTCCGGACAG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAGKSKS*LVLSGQ
Trigger: CTGTCCGGAGAGAACCAGCCAGCTCTTTGATTTGCC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGCTCTTTCTGCAACGTaGCGGCAGACGCACGGGGCT +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLALSAT*RQTHGA
Trigger: AGCCCCGTGCGTCTGCCGCCACGTTGCAGAAAGAGC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCTGGACTCGTACGGGTaGGGAACCGACTTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWLDSYG*GTDLPP
Trigger: AGGCGGCAAGTCGGTTCCTCACCCGTACGAGTCCAG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAATGACCGTGTGGGGTaGGAGCGCGTAGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWNDRVG*ERVGPV
Trigger: CACCGGTCCTACGCGCTCTCACCCCACACGGTCATT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTGCTGCCGACCGGGATaGGCAGGGGCTGTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGCCRPG*AGAVCR
Trigger: CCGGCACACAGCCCCTGCTCATCCCGGTCGGCAGCA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGTGGTGACGAACGTGTaGGGCACTGCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQVVTNV*GTAANW
Trigger: CCAGTTTGCTGCAGTGCCTCACACGTTCGTCACCAC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATGTCTCCGCGATGCCCTaGAGCTGGGTTCCTGATGTT +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYVSAMP*SWVPDV
Trigger: AACATCAGGAACCCAGCTTCAGGGCATCGCGGAGAC...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTCCAAATCTGCCATCTaGCGCGTCTCCGCGATGCCC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLSKSAI*RVSAMP
Trigger: GGGCATCGCGGAGACGCGTCAGATGGCAGATTTGGA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCACCTGCCCCGTCCCTaGGAAAGAGGTGTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYHLPRP*ERGVKG
Trigger: ACCTTTCACACCTCTTTCTCAGGGACGGGGCAGGTG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGGGGACATGAAAAACTaGAGCCGGTGTTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQGDMKN*SRCSLP
Trigger: CGGGAGGGAACACCGGCTTCAGTTTTTCATGTCCCC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTGCGGCCGAGGCCACTaGACTGGTGACGGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDCGRGH*TGDGVG
Trigger: GCCAACCCCGTCACCAGTGCAGTGGCCTCGGCCGCA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCGGCATACCTGTGTCTaGTGCCCGCCAGGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDRHTCV*CPPGRR
Trigger: CCGACGGCCTGGCGGGCAGCAGACACAGGTATGCCG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTCCTTTCCCCCACGCTaGCTCTACTTGCCTACATTA +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLASFPPR*LYLPTL
Trigger: TAATGTAGGCAAGTAGAGGCAGCGTGGGGGAAAGGA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGGGGAGAAGGAGGGATaGTGCCACTTCCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWGEKEG*CHFLVG
Trigger: CCCCACCAGGAAGTGGCAGCATCCCTCCTTCTCCCC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTTTCTTTTCAATAAGGTaGAAAACATCATTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPFFSIR*KTSFLP
Trigger: GGGAAGGAATGATGTTTTGCACCTTATTGAAAAGAA...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACCTCGGAGGACCGGCTaGTGGCGGGGATCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTPRRTG*WRGSRA
Trigger: AGCGCGAGATCCCCGCCACCAGCCGGTCCTCCGAGG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAACGCGGCAGGCAGCGTaGTGGCCACGGGGACAGACC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTTRQAA*WPRGQT
Trigger: GGTCTGTCCCCGTGGCCACCACGCTGCCTGCCGCGT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGCTGGGATGGAGTGGTaGCCCCTGCGGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTAGMEW*PLRPRP
Trigger: TGGCCTCGGCCGCAGGGGCCACCACTCCATCCCAGC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAGCGCTGGGATGGAGTaGTGGCCCCTGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGSAGME*WPLRPR
Trigger: CCTCGGCCGCAGGGGCCACCACTCCATCCCAGCGCT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCTGGGAGCGCTGGGATaGAGTGGTGGCCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGLGALG*SGGPCG
Trigger: GCCGCAGGGGCCACCACTCCATCCCAGCGCTCCCAG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTCCCGAGGGACAAAGTaGCTGCCGGAGTCGGCGTAT +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLSRGTK*LPESAY
Trigger: ATACGCCGACTCCGGCAGCCACTTTGTCCCTCGGGA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCGGGCGTGTTGCTGTTaGGCAGGACCATCACAGAGG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLRACCC*AGPSQR
Trigger: CCTCTGTGATGGTCCTGCCCAACAGCAACACGCCCG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTCTTATCTCTGCACTCTaGATGAAATCTTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: APALSIRSRGKVGGSLPPLISAL*MKSSVF
Trigger: AAAAACAGAAGATTTCATCCAGAGTGCAGAGATAAG...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCAGTTTGCGGCTCTCTaGCGCCGACCACCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLQFAAL*RRPPPL
Trigger: AAGAGGAGGTGGTCGGCGCCAGAGAGCCGCAAACTG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTCTCAGAGATGGCTCTaGAGCCAGGACTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSQRWL*SQDSTG
Trigger: GCCAGTGGAGTCCTGGCTCCAGAGCCATCTCTGAGA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 72 bp AGTGCCCTCAACCCAAGTTCTGGTGTCTGTTTTCCCTaGGCCTGTGGGAGGCATATGGTGGGTAATGATCTG +
Preference number: 4 (lower is better)
Translates to: SALNPSSGVCFP*ACGRHMVGNDL
Trigger: CAGATCATTACCCACCATATGCCTCCCACAGGCCAAGGGAAAACAGACACCAGAACTTGGGTTGAGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAATGGACCACCCTGGTaGCTTGATGCACGATGCTCC +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQNGPPW*LDARCS
Trigger: GGAGCATCGTGCATCAAGTCACCAGGGTGGTCCATT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244769.8
CDS-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCACGAAGATTTTGCTTaGGTAGAAAGGGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAHEDFA*VERVAV
Trigger: CACTGCCACCCTTTCTACTCAAGCAAAATCTTCGTG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGGCCACTGCACTGGTaGCGGGGTTGGCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTRPLHW*RGWRLG
Trigger: CCCCAACCGCCAACCCCGTCACCAGTGCAGTGGCCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGCACTGTGTGTGGTCTaGATGACCGTGTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLALCVV*MTVWGE
Trigger: CTCACCCCACACGGTCATTCAGACCACACACAGTGC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCCAGGGCCTCAGGGTTaGAGTTCTCGCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLPGPQG*SSRSWE
Trigger: TTCCCAAGAGCGAGAACTTCAACCCTGAGGCCCTGG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCCAAAACTTCAACGCTaGCCTGGGCTCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWPKLQR*PGLGAP
Trigger: GGGAGCACCGAGCCCAGGTCAGCGTTGAAGTTTTGG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTTCTGTTGCTCTCACTaGAGGGCAGTTTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAFCCSH*RAVCIY
Trigger: GTAGATGCAAACTGCCCTTCAGTGAGAGCAACAGAA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGCCACAAGGGAGTGGTaGCCGTGGGTGGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEATREW*PWVAGG
Trigger: ACCACCTGCCACCCACGGTCACCACTCCCTTGTGGC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGCTACACAGAAGCGGTaGCAGAGGCTGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWATQKR*QRLLWE
Trigger: CTCCCAGAGCAGCCTCTGTCACCGCTTCTGTGTAGC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCAAGTCATGGGGACATaGAAAACTGAAGCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAQVMGT*KTEAGV
Trigger: AACACCGGCTTCAGTTTTTCATGTCCCCATGACTTG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCGGGAGCCATGCTGTaGCCTCCACCCGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPGAML*PPPGGC
Trigger: ACAACCACCGGGTGGAGGGCACAGCATGGCTCCCGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAACCGACTTGCCGCCTaGCTTGCCCAGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDNRLAA*LAQAQV
Trigger: GACCTGGGCCTGGGCAAGGCAGGCGGCAAGTCGGTT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGGTGAGGAACCGACTTaGCGCCTGCCTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDGEEPT*RLPCPG
Trigger: GCCTGGGCAAGGCAGGCGGCAAGTCGGTTCCTCACC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGACTATGGCCGGGGCTaGCCCCGACGCTTCCATGTC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDDYGRG*PRRFHV
Trigger: GACATGGAAGCGTCGGGGGCAGCCCCGGCCATAGTC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACTGACCTGGGCTCGGTaGTCCCCGACGGCGAACTGT +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTELTWAR*SPTANC
Trigger: ACAGTTCGCCGTCGGGGAGCACCGAGCCCAGGTCAG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACATACCTGTGTCTGCTaGCCGCCAGGCCGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEHTCVC*PPGRRP
Trigger: AGGCCGACGGCCTGGCGGGCAGCAGACACAGGTATG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGACATGCGTGCAACCCTaGACCCCTGCAGGACCCTTC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWTCVQP*TPAGPF
Trigger: GAAGGGTCCTGCAGGGGTGCAGGGTTGCACGCATGT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGCACCCCCACATGCGTaGAACCCTGCACCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDAPPHA*NPAPLQ
Trigger: CTGCAGGGGTGCAGGGTTGCACGCATGTGGGGGTGC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCAAACAGGAGGCTCCTaGCCTCTGTGCGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYQTGGS*PLCVLP
Trigger: AGGAAGAACGCACAGAGGGCAGGAGCCTCCTGTTTG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAGCGGTGACAGAGGCTaGTCTGGGAGCCTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGSGDRG*SGSLGA
Trigger: GGCCCCGAGGCTCCCAGAGCAGCCTCTGTCACCGCT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGCGGTGACAGAGGCTaGTCTGGGAGCCTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTSGDRG*SGSLGA
Trigger: GGCCCCGAGGCTCCCAGAGCAGCCTCTGTCACCGCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACGGCTGCTGTTGCTCTaGCTGCTGCTCCACGGGGCT +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTERLLLL*LLLHGA
Trigger: AGCCCCGTGGAGCAGCAGCCAGAGCAACAGCAGCCG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACGGAGGACCGGCTGGTaGCGGGGATCTCGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTRRTGW*RGSRAS
Trigger: AGAAGCGCGAGATCCCCGCCACCAGCCGGTCCTCCG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGTGCCCTCCACCCGGTaGTTGTCGCTGGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDVPSTR*LSLGRV
Trigger: TACCCTGCCCAGCGACAACCACCGGGTGGAGGGCAC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGCGCTGGGATGGAGTaGTGGCCCCTGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSAGME*WPLRPR
Trigger: CCTCGGCCGCAGGGGCCACCACTCCATCCCAGCGCT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTTGTGTCCCGGCGTCTaGCTCAGACTGCCCATGTTG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLLCPGV*LRLPML
Trigger: CAACATGGGCAGTCTGAGCCAGACGCCGGGACACAA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATATCGTCTGGTGGGGGTaGAGGTGGACGGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDIVWWG*RWTGMA
Trigger: GGCCATCCCCGTCCACCTCCACCCCCACCAGACGAT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCAGGGTGAGCGTGTGTaGGATCATCGTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWQGERV*DHRLVG
Trigger: CCCCACCAGACGATGATCCCACACACGCTCACCCTG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACTGCGTAGAAGGCCGTaGCTGGCAGTCCCACCGGGA +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTELRRRP*LAVPPG
Trigger: TCCCGGTGGGACTGCCAGCCACGGCCTTCTACGCAG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATGGCACTGCAGCAAACTaGGGGGATGACGTGACTATG +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYGTAAN*GDDVTM
Trigger: CATAGTCACGTCATCCCCCCAGTTTGCTGCAGTGCC...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGCGGGATCCACGGGCTaGCCCTTTTTAACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWAGSTG*PFLTEP
Trigger: CGGCTCTGTTAAAAAGGGCCAGCCCGTGGATCCCGC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGCTTCAGCAGGACGCTaGCGGGATCCACGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGASAGR*RDPRAG
Trigger: GCCAGCCCGTGGATCCCGCCAGCGTCCTGCTGAAGC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATTCCCCGGGGATGCCTaGAGCCCTGACCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTFPGDA*SPDRSC
Trigger: GCAGGAGCGGTCAGGGCTCCAGGCATCCCCGGGGAA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGCACAGAAACCAGCGTaGGTGTTCGCTCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLAQKPA*VFALSL
Trigger: GAGGGAGAGAGCGAACACCCACGCTGGTTTCTGTGC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCCGGGTCTCCTTGGCTaGCTCTTTCTGCAACGTGGC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWPGLLG*LFLQRG
Trigger: GCCACGTTGCAGAAAGAGCCAGCCAAGGAGACCCGG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTACGAGTCTCAGAGATaGCTCTGGAGCCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQYESQR*LWSQDS
Trigger: GGAGTCCTGGCTCCAGAGCCATCTCTGAGACTCGTA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAAGGTGTGCGGCAGGTaGGCGTACTGCACGGGGGAC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTKVCGR*AYCTGD
Trigger: GTCCCCCGTGCAGTACGCTCACCTGCCGCACACCTT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGTGGTGACGAACGTGTaGGGCACTGCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWVVTNV*GTAANW
Trigger: CCAGTTTGCTGCAGTGCCTCACACGTTCGTCACCAC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATGGGAAGGGCGGTGGTaGCGAACGTGTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEWEGRW*RTCEAL
Trigger: CAGTGCCTCACACGTTCGTCACCACCGCCCTTCCCA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTGGGTTCTATTTTGGTaGGGAAGGGCGCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLWVLFW*GRALQA
Trigger: TGCCTGCAGCGCCCTTCCTCACCAAAATAGAACCCA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCTCCCGCCCGCTCACTaGCAGACACTCGTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWLPPAH*QTLVEK
Trigger: TTTTTCCACGAGTGTCTGTCAGTGAGCGGGCGGGAG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGAGAAGGCAGGCACTGTaGAGCCCCGTTCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLRRQAL*SPVPFF
Trigger: GAAGAAAGGAACGGGGCTTCACAGTGCCTGCCTTCT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTGCTGCTGCTGCTGCTaGTCAGCCTTGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDCCCCC*SALCPG
Trigger: GCCGGGACACAAGGCTGAGCAGCAGCAGCAGCAGCA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGTGCGGCCGGTGTTCTaGGGAGAACTGGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWVRPVF*GELEMW
Trigger: CCACATTTCCAGTTCTCCGCAGAACACCGGCCGCAC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGGTGAGGAACCGACTTaGCGCCTGCCTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGGEEPT*RLPCPG
Trigger: GCCTGGGCAAGGCAGGCGGCAAGTCGGTTCCTCACC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGTCAGCGCCCCCGGCTaGTTCTGTGCCGCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDVSAPG*FCAARE
Trigger: TTCTCTAGCGGCACAGAAGCAGCCGGGGGCGCTGAC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCCGCCACAGCGCCTGTaGACCCCCACATGCGTGCAA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGPPQRL*TPTCVQ
Trigger: TTGCACGCATGTGGGGGTGCACAGGCGCTGTGGCGG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCGGCTGCTGTTGCTCTaGCTGCTGCTCCACGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGRLLLL*LLLHGA
Trigger: AGCCCCGTGGAGCAGCAGCCAGAGCAACAGCAGCCG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGTGCCCTCCACCCGGTaGTTGTCGCTGGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGVPSTR*LSLGRV
Trigger: TACCCTGCCCAGCGACAACCACCGGGTGGAGGGCAC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACAGACCTGGGAGCGCTaGGCGGGGAGTAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRQTWER*AGSSPA
Trigger: GGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGAAATGTGGACGTACTaGTTCTGCTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLEMWTY*FCWAGG
Trigger: CCCACCAGCCCAGCAGAACCAGTACGTCCACATTTC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATGGTGGGGGTGGAGGTaGACGGGGATGGCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRWWGWR*TGMAGG
Trigger: TCCTCCGGCCATCCCCGTCCACCTCCACCCCCACCA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTCTCAGCTTTCTTGGTaGCCTCCCGAGGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQSQLSW*PPEGQS
Trigger: ACTTTGTCCCTCGGGAGGCCACCAAGAAAGCTGAGA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGGCCTGCACCATGGCTaGGTAGGCGGCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRGLHHG*VGGLGD
Trigger: GTCACCCAGGCCGCCTACCCAGCCATGGTGCAGGCC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAACAGGCAGGTGGATCTaGGCCTGCACCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTETGRWI*ACTMAG
Trigger: CCCAGCCATGGTGCAGGCCCAGATCCACCTGCCTGT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATACTTCAACGCTGACCTaGGCTCGGTGCTCCCCGACG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDTSTLT*ARCSPT
Trigger: CGTCGGGGAGCACCGAGCCCAGGTCAGCGTTGAAGT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCCCAACTGAGAGTTTaGAACACGGCAAATCAAAGA +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPQLRV*NTANQR
Trigger: TCTTTGATTTGCCGTGTTCCAAACTCTCAGTTGGGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGCACAGAAACCAGCGTaGGTGTTCGCTCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWAQKPA*VFALSL
Trigger: GAGGGAGAGAGCGAACACCCACGCTGGTTTCTGTGC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGCAGCAGGGGAAAGGTaGGAGGCTCTCTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDAAGER*EALSLL
Trigger: CAGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCCCTCCACAGCCACTaGCCAACACGCTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPLHSH*PTRSER
Trigger: GCGTTCTGAGCGTGTTGGCCAGTGGCTGTGGAGGGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAACCGTGGGTGGCAGGTaGTCCCCTCCACAGCCACTG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTTVGGR*SPPQPL
Trigger: CAGTGGCTGTGGAGGGGACCACCTGCCACCCACGGT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTCTCAGAGATGGCTCTaGAGCCAGGACTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSQRWL*SQDSTG
Trigger: GCCAGTGGAGTCCTGGCTCCAGAGCCATCTCTGAGA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 72 bp AACCTCCTTTCGGCTGACACTAATTTGGGTTTAGAGTaGAGCAGTTCAGGCTGGGGAGATGAGGAAACCCCG +
Preference number: 4 (lower is better)
Translates to: NLLSADTNLGLE*SSSGWGDEETP
Trigger: CGGGGTTTCCTCATCTCCCCAGCCTGAACTGCTCAACTCTAAACCCAAATTAGTGTCAGCCGAAAGGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGACCATCCGTGCAGGCTaGAATCCACTCTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQTIRAG*NPLFLS
Trigger: AGAGAGAAAGAGTGGATTTCAGCCTGCACGGATGGT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGATTGGGAGGACCCAATaGACTGGAAGGTGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWIGRTQ*TGRCAA
Trigger: TGCCGCACACCTTCCAGTTCATTGGGTCCTCCCAAT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCTGGACTCGTACGGGTaGGGAACCGACTTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGLDSYG*GTDLPP
Trigger: AGGCGGCAAGTCGGTTCCTCACCCGTACGAGTCCAG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCGCTCAGGTAGCCGATaGCAGGGGGTTGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGRSGSR*QGVESL
Trigger: CAGGGACTCAACCCCCTGTCATCGGCTACCTGAGCG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTCTCAGACATCAAAGTaGAAAGTGCCTCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQSQTSK*KVPPVR
Trigger: CCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCTGACAGGACTATCTTaGAACCTCCTTTCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYLTGLS*NLLSAD
Trigger: GTCAGCCGAAAGGAGGTTTCAAGATAGTCCTGTCAG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATACCACCCTGGTGACTTaGTGCACGATGCTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYTTLVT*CTMLCK
Trigger: TTTACAGAGCATCGTGCATCAAGTCACCAGGGTGGT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTGTTGCTCTGGCTGCTaGTCCACGGGGCTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWCCSGC*STGLVL
Trigger: CAAAACAAGCCCCGTGGAGCAGCAGCCAGAGCAACA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGCGTCTGGCTCAGACTaGCCATGTTGGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEASGSD*PCWPAE
Trigger: CTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTGCTGCTGCTGCTGCTaGTGCTCAGCCTTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDCCCCC*CSALCP
Trigger: GGGACACAAGGCTGAGCAGCAGCAGCAGCAGCAGCA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCTGCTGCAGCCGGCTaGTCTCAGCTTTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPAAAG*SQLSWW
Trigger: CCACCAAGAAAGCTGAGAGCAGCCGGCTGCAGCAGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCACCTCCAGGTCAGCTaGGGGCGTGTTGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGHLQVS*GRVAVG
Trigger: CCCAACAGCAACACGCCCGCAGCTGACCTGGAGGTG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCCAGGCTTCCCTAAATaGAGGCCACTTTTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYPGFPK*RPLLSL
Trigger: CAACGACAAAAGTGGCCTGCATTTAGGGAAGCCTGG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGGGGGTTGAGTCCCTaGGTAGAAGGCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTRGLSP*VEGRGW
Trigger: CCAGCCACGGCCTTCTACGCAGGGACTCAACCCCCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAGGGGGTTGAGTCCCTaGGTAGAAGGCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGRGLSP*VEGRGW
Trigger: CCAGCCACGGCCTTCTACGCAGGGACTCAACCCCCT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTATGCACCAGTCTCCTaGGACACACCTGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQYAPVS*DTPAVT
Trigger: AGTTACAGCAGGTGTGTCGCAGGAGACTGGTGCATA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGTCAGCGCCCCCGGCTaGTTCTGTGCCGCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGVSAPG*FCAARE
Trigger: TTCTCTAGCGGCACAGAAGCAGCCGGGGGCGCTGAC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCAAACAGGAGGCTCCTaGCCTCTGTGCGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWQTGGS*PLCVLP
Trigger: AGGAAGAACGCACAGAGGGCAGGAGCCTCCTGTTTG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGGGCCCGCCAACGTCTaGAAACAGGAGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRGPANV*KQEAPA
Trigger: GGCAGGAGCCTCCTGTTTGCAGACGTTGGCGGGCCC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGTCATCGTTAATGTTTaGTACACAGAAGCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAVIVNV*YTEAVT
Trigger: TGTCACCGCTTCTGTGTAGCAAACATTAACGATGAC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCCAGAGCAGTCAAAGTaGTGCTTCTGGACACGTCAG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLPEQSK*CFWTRQ
Trigger: CTGACGTGTCCAGAAGCAGCACTTTGACTGCTCTGG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAGCTACCAGAACAGTTaGCTTCAACGAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQSYQNS*LQREGR
Trigger: CCTCCCTTCTCGTTGAAGGCAACTGTTCTGGTAGCT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGCCTATACTTCACCATaGAGACTTCCCACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQAYTSP*RLPTGS
Trigger: AGAGCCTGTGGGAAGTCTCCATGGTGAAGTATAGGC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTGTGGGATCATCGTCTaGTGGGGGTGGAGGTGGACG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDCGIIV*WGWRWT
Trigger: CGTCCACCTCCACCCCCACCAGACGATGATCCCACA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATCCCGAGGGACAAAGTaGCTGCCGGAGTCGGCGTAT +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTESRGTK*LPESAY
Trigger: ATACGCCGACTCCGGCAGCCACTTTGTCCCTCGGGA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGGACCACCACGTGCCTaGACTCGTACGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDGPPRA*TRTGEE
Trigger: TTCCTCACCCGTACGAGTCCAGGCACGTGGTGGTCC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGGACCACCACGTGCCTaGACTCGTACGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEGPPRA*TRTGEE
Trigger: TTCCTCACCCGTACGAGTCCAGGCACGTGGTGGTCC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAGGCTTCACGATGAGTaGCCTGTTGCACCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWRLHDE*PVAPPG
Trigger: ACCTGGAGGTGCAACAGGCCACTCATCGTGAAGCCT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGTAGAAGGCCGTGGCTaGCAGTCCCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRVEGRG*QSHREW
Trigger: CCACTCCCGGTGGGACTGCCAGCCACGGCCTTCTAC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGGCACTGCAGCAAACTaGGGGGATGACGTGACTATG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWGTAAN*GDDVTM
Trigger: CATAGTCACGTCATCCCCCCAGTTTGCTGCAGTGCC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGCTCTTTCTGCAACGTaGCGGCAGACGCACGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGALSAT*RQTHGA
Trigger: AGCCCCGTGCGTCTGCCGCCACGTTGCAGAAAGAGC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATGGATCCCCCTGCAGTaGAACAGGTCCTGTACGGCT +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEWIPLQ*NRSCTA
Trigger: AGCCGTACAGGACCTGTTTCACTGCAGGGGGATCCA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCACCGGGAGTGGCTCTaGAGCACTGTGTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGHREWL*STVCGL
Trigger: CAGACCACACACAGTGCTTCAGAGCCACTCCCGGTG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATGGGAAGGGCGGTGGTaGCGAACGTGTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRWEGRW*RTCEAL
Trigger: CAGTGCCTCACACGTTCGTCACCACCGCCCTTCCCA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGCAGACATCCCCAACTaGGAGTTTGGAACACGGCAA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWADIPN*EFGTRQ
Trigger: TTGCCGTGTTCCAAACTCTCAGTTGGGGATGTCTGC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCAAATCTTAACCTCCTaGGGAATTAGAGAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAQILTS*GIREGL
Trigger: TAAGCCTTCTCTAATTCCTCAGGAGGTTAAGATTTG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGACCACAACACCCTGGTaGCATCGCTGCACTAGTAAA +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLTTTPW*HRCTSK
Trigger: TTTACTAGTGCAGCGATGTCACCAGGGTGTTGTGGT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCTGATCCTTGTAAGCTaGACGGCACCGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYLILVS*TAPKNF
Trigger: GAAATTCTTCGGTGCCGTTCAGCTTACAAGGATCAG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATGCTGCTTGTGGTTCATaGAACAGTAGCCATGACAAC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYAACGS*NSSHDN
Trigger: GTTGTCATGGCTACTGTTTCATGAACCACAAGCAGC...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCAGGAACAGGAAGTGCTaGAAATGTCAAACATCATCT +
Preference number: 4 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLARNRKC*KCQTSS
Trigger: AGATGATGTTTGACATTTTCAGCACTTCCTGTTCCT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGGGGACATGAAAAACTaGAGCCGGTGTTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDGDMKN*SRCSLP
Trigger: CGGGAGGGAACACCGGCTTCAGTTTTTCATGTCCCC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCGGAGTCGGCGTATTaGATGACGACCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPESAY*MTTWEG
Trigger: CCCCTCCCAGGTCGTCATGCAATACGCCGACTCCGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACCTGCTGCAGCCGGCTaGTCTCAGCTTTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTPAAAG*SQLSWW
Trigger: CCACCAAGAAAGCTGAGAGCAGCCGGCTGCAGCAGG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACAGCTGCGGGCGTGTTaGTGTTGGGCAGGACCATCA +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTQLRAC*CWAGPS
Trigger: TGATGGTCCTGCCCAACAGCAACACGCCCGCAGCTG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCTCCTGCGACACACCTaGTGTAACTCTAATGACAAG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQLLRHT*CNSNDK
Trigger: CTTGTCATTAGAGTTACAGCAGGTGTGTCGCAGGAG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACCTTCCCTCCAGCCCTaGTCTGGCCAGAATGGGGAA +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTPSLQP*SGQNGE
Trigger: TTCCCCATTCTGGCCAGAGCAGGGCTGGAGGGAAGG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTCCGGAGTAGAGGTGTaGAAGTTGTTTGGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQSGVEV*KLFGVS
Trigger: GGAAACTCCAAACAACTTGCACACCTCTACTCCGGA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGAGCTACCAGAACAGTTaGCTTCAACGAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLSYQNS*LQREGR
Trigger: CCTCCCTTCTCGTTGAAGGCAACTGTTCTGGTAGCT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAAGTGTAAATGGATCTaGGGTTGCGTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWKCKWI*GCVGKG
Trigger: CCCCTTCCCCACGCAACCCCAGATCCATTTACACTT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCGCCAACAGCAGCTCTaGATGAACATTCACTGCGTA +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLRQQQL*MNIHCV
Trigger: TACGCAGTGAATGTTCATCCAGAGCTGCTGTTGGCG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGGATCTCGCGCTTCTTaGGAGGCAGGCATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDGSRAS*EAGIRC
Trigger: GCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTGCACCACAGGCAGGTaGATCTGGGCCTGCACCATG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGCTTGR*IWACTM
Trigger: CATGGTGCAGGCCCAGATCCACCTGCCTGTGGTGCA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGCCACGCCCGGGCTATaGCTGTCTTCAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDATPGL*LSSILS
Trigger: AGAGAGGATTGAAGACAGCCATAGCCCGGGCGTGGC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCTCCAGCCCTGCTCTaGCCAGAATGGGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPPALL*PEWGRS
Trigger: TGATCTTCCCCATTCTGGCCAGAGCAGGGCTGGAGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCTCCAGCCCTGCTCTaGCCAGAATGGGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPPALL*PEWGRS
Trigger: TGATCTTCCCCATTCTGGCCAGAGCAGGGCTGGAGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACCGGGTCTCCTTGGCTaGCTCTTTCTGCAACGTGGC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTPGLLG*LFLQRG
Trigger: GCCACGTTGCAGAAAGAGCCAGCCAAGGAGACCCGG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCCCTCCACAGCCACTaGCCAACACGCTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPLHSH*PTRSER
Trigger: GCGTTCTGAGCGTGTTGGCCAGTGGCTGTGGAGGGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAACCGAATTGGGCCATaGAGTCTGCTGGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWNRIGP*SLLALF
Trigger: AAACAGGGCCAGCAGACTCCATGGCCCAATTCGGTT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGATTTACCCCACTCCTaGGCCAGAAAACTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQDLPHS*ARKLKE
Trigger: CTCTTTCAGTTTTCTGGCCCAGGAGTGGGGTAAATC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTGGATCCCCCTGCAGTaGAACAGGTCCTGTACGGCT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGWIPLQ*NRSCTA
Trigger: AGCCGTACAGGACCTGTTTCACTGCAGGGGGATCCA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGATCCAGGCTCTTCATaGGGAATCATCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEDPGSS*GIISPW
Trigger: CCACGGGGAGATGATTCCTCATGAAGAGCCTGGATC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATATTGGGAGGACCCAATaGACTGGAAGGTGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDIGRTQ*TGRCAA
Trigger: TGCCGCACACCTTCCAGTTCATTGGGTCCTCCCAAT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGGGCACTCCCCTGGTTaGTTCCGTTTTCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRGHSPG*FRFPAR
Trigger: CCGAGCAGGAAAACGGAATCAACCAGGGGAGTGCCC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGTCTCCGCGATGCCCTaGAGCTGGGTTCCTGATGTT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTVSAMP*SWVPDV
Trigger: AACATCAGGAACCCAGCTTCAGGGCATCGCGGAGAC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTTCGCAAACTCAACGTaGAGAGCTTCTGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLFANST*RASVAL
Trigger: GAGAGCAACAGAAGCTCTTCACGTTGAGTTTGCGAA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTCTCTGCAAGCATGCTaGGAGGGTAATGAAATTCGA +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSLQAC*EGNEIR
Trigger: TCGAATTTCATTACCCTCTCAGCATGCTTGCAGAGA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCGTGGAAAATGGGTTaGCTCCAGGCTACATGGCTC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPWKMG*LQATWL
Trigger: GAGCCATGTAGCCTGGAGTCAACCCATTTTCCACGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTGCGTTCTTCCTATTTaGAGAGAAAGCTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYCVLPI*RESCHK
Trigger: CTTGTGGCAGCTTTCTCTTCAAATAGGAAGAACGCA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCTGAGAAAGAGGTGTaGAAGGTTCCGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPEKEV*KVPQSP
Trigger: GGGACTCTGCGGAACCTTTCACACCTCTTTCTCAGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTCACCTGGTGCAAATTaGAGTGCAAAGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSPGAN*SAKGFR
Trigger: TCTGAAACCCTTTGCACTTCAATTTGCACCAGGTGA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATATAATGAGTCCTGTTTaGTTGGTAGCCTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYIMSPV*LVAWIP
Trigger: AGGGATCCAGGCTACCAATCAAACAGGACTCATTAT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTTCCACTGTCCGGCTTaGTTTTTGGACAGGAATACT +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQFHCPA*FLDRNT
Trigger: AGTATTCCTGTCCAAAAATCAAGCCGGACAGTGGAA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATGTTGCTCTGGCTGCTaGTCCACGGGGCTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTECCSGC*STGLVL
Trigger: CAAAACAAGCCCCGTGGAGCAGCAGCCAGAGCAACA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAGTGGAGGAGGAGATTaGTGTACAAGGATGACAAAC +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQSGGGD*CTRMTN
Trigger: GTTTGTCATCCTTGTACAGCAATCTCCTCCTCCACT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATAGTGGAGGAGGAGATTaGTGTACAAGGATGACAAAC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSGGGD*CTRMTN
Trigger: GTTTGTCATCCTTGTACAGCAATCTCCTCCTCCACT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCTCTTGTTCCTGGTCTaGAGCAGCACTAAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQLLFLV*SSTKFE
Trigger: TTCAAACTTAGTGCTGCTGCAGACCAGGAACAAGAG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATGCTGCTGCTGCTGCTaGTGCTCAGCCTTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRCCCCC*CSALCP
Trigger: GGGACACAAGGCTGAGCAGCAGCAGCAGCAGCAGCA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGAGGGACAAAGTGGCTaGCGGAGTCGGCGTATTGCA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGEGQSG*RSRRIA
Trigger: TGCAATACGCCGACTCCGGCAGCCACTTTGTCCCTC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGAGGGACAAAGTGGCTaGCGGAGTCGGCGTATTGCA +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTEGQSG*RSRRIA
Trigger: TGCAATACGCCGACTCCGGCAGCCACTTTGTCCCTC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGGTGAGGAAGGGCGCTaGAGGCAATCCCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEGEEGR*RQSHFL
Trigger: GAGAAAATGGGATTGCCTGCAGCGCCCTTCCTCACC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTTAACTTTCCAAATCTaGCATCTGACGCGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLLTFQI*HLTRLR
Trigger: GCGGAGACGCGTCAGATGGCAGATTTGGAAAGTTAA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCATCAAAGTGAAAAGTaGCTCCCGTCAGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYHQSEK*LPSGST
Trigger: AGTACTACCTGACGGGAGGCACTTTTCACTTTGATG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATAATAAGCAGTATGACTaGAAGAATGAGCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYNKQYD*KNEPTQ
Trigger: CTGGGTGGGCTCATTCTTGCAGTCATACTGCTTATT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATTGGCTGGCTCTTTCTaGAACGTGGCGGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTLAGSF*NVAADA
Trigger: TGCGTCTGCCGCCACGTTGCAGAAAGAGCCAGCCAA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGAGCCTCCAATGTATCTaGAGTGGAAGACTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLSLQCI*SGRLES
Trigger: GGACTCAAGTCTTCCACTGCAGATACATTGGAGGCT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGCTCCTGAGGGCTCTTaGGCTCAGGCGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGAPEGS*AQACSF
Trigger: GAAAGAACACGCCTGAGCCCAAGAGCCCTCAGGAGC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATAGTAGTCCAGCCCTGTaGACAATGCTTTGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSSPAL*TMLCVN
Trigger: GTTTACACAAAGCATTGTCCACAGGGCTGGACTACT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTGCTCTCAGCTTTCTTaGTGGCCTCCCGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDCSQLS*WPPEGQ
Trigger: TTGTCCCTCGGGAGGCCACCAAGAAAGCTGAGAGCA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGCCACGCCCGGGCTATaGCTGTCTTCAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGATPGL*LSSILS
Trigger: AGAGAGGATTGAAGACAGCCATAGCCCGGGCGTGGC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACAGTTTGCGGCTCTCTaGCGCCGACCACCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRQFAAL*RRPPPL
Trigger: AAGAGGAGGTGGTCGGCGCCAGAGAGCCGCAAACTG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGAGCCCGCTAAGACCTaGCTTTTTGTGACAGATGTG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWEPAKT*LFVTDV
Trigger: CACATCTGTCACAAAAAGCCAGGTCTTAGCGGGCTC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCGAAGAAACCGAATTaGGCCATGGAGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPKKPN*AMESAG
Trigger: GCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAGGAGACAGGCTCATTaGCCATCCAGACAGCAAACA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWRRQAH*PSRQQT
Trigger: TGTTTGCTGTCTGGATGGCCAATGAGCCTGTCTCCT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCGAAGGCCTTCAGATTaGCCACAGAAAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWRRPSD*PQKRRQ
Trigger: CTGTCTCCTTTTCTGTGGCCAATCTGAAGGCCTTCG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATTGAGCAGTTCAGGCTaGGGAGATGAGGAAACCCCG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTELSSSG*GDEETP
Trigger: CGGGGTTTCCTCATCTCCCCAGCCTGAACTGCTCAA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAACAGCAGCTCTGGATaGACATTCACTGCGTACTGT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWNSSSG*TFTAYC
Trigger: ACAGTACGCAGTGAATGTTCATCCAGAGCTGCTGTT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGCAGACATCCCCAACTaGGAGTTTGGAACACGGCAA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDADIPN*EFGTRQ
Trigger: TTGCCGTGTTCCAAACTCTCAGTTGGGGATGTCTGC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACTCCCGCCCGCTCACTaGCAGACACTCGTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRLPPAH*QTLVEK
Trigger: TTTTTCCACGAGTGTCTGTCAGTGAGCGGGCGGGAG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGAAGGCAGGCACTGTaGAGCCCCGTTCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTRRQAL*SPVPFF
Trigger: GAAGAAAGGAACGGGGCTTCACAGTGCCTGCCTTCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATGAAGACTGTCTAATCTaGAGGTCACCACAAATACTG +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYEDCLI*RSPQIL
Trigger: CAGTATTTGTGGTGACCTTCAGATTAGACAGTCTTC...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTCCACTGGCTGGAAATaGAGACTGTCTAATCTGAAG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLSTGWK*RLSNLK
Trigger: CTTCAGATTAGACAGTCTTCATTTCCAGCCAGTGGA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAATGGACCACCCTGGTaGCTTGATGCACGATGCTCT +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDNGPPW*LDARCS
Trigger: AGAGCATCGTGCATCAAGTCACCAGGGTGGTCCATT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCGAAGGATCACGACTaGTGTAGTCTGAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPKDHD*CSLRGS
Trigger: CGAGCCCCTCAGACTACAGCAGTCGTGATCCTTCGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGGTGAGGAAGGGCGCTaGAGGCAATCCCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGGEEGR*RQSHFL
Trigger: GAGAAAATGGGATTGCCTGCAGCGCCCTTCCTCACC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCAGAGCAGTCAAAGTaGTGCTTCTGGACACGTCAG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPEQSK*CFWTRQ
Trigger: CTGACGTGTCCAGAAGCAGCACTTTGACTGCTCTGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGACCAGTCTGTTGAGCTaGTTGTGGTTCATGAAACAG +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLTSLLS*LWFMKQ
Trigger: CTGTTTCATGAACCACAAGCAGCTCAACAGACTGGT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAAGTGTAAATGGATCTaGGGTTGCGTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDKCKWI*GCVGKG
Trigger: CCCCTTCCCCACGCAACCCCAGATCCATTTACACTT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTTTCTCTCTTGTTCCTaGTCTGCAGCAGCACTAAGT +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLFLSCS*SAAALS
Trigger: ACTTAGTGCTGCTGCAGACCAGGAACAAGAGAGAAA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGGATCTCGCGCTTCTTaGGAGGCAGGCATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRGSRAS*EAGIRC
Trigger: GCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATTGTGTCCCGGCGTCTaGCTCAGACTGCCCATGTTG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRLCPGV*LRLPML
Trigger: CAACATGGGCAGTCTGAGCCAGACGCCGGGACACAA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAGGCTTCACGATGAGTaGCCTGTTGCACCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGRLHDE*PVAPPG
Trigger: ACCTGGAGGTGCAACAGGCCACTCATCGTGAAGCCT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTCCCCGTTGGCCAACTaGATGATGGAGCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDSPLAN*MMEPFM
Trigger: CATGAAAGGCTCCATCATCCAGTTGGCCAACGGGGA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTCCTCTCTACGGTGCTaGAGTCGATCTTCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDSSLRC*SRSSGR
Trigger: ACGACCTGAAGATCGACTCCAGCACCGTAGAGAGGA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGGCAAATCAAAGAGCTaGCTGGTTCTCTCCGGACAG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEGKSKS*LVLSGQ
Trigger: CTGTCCGGAGAGAACCAGCCAGCTCTTTGATTTGCC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAATCTGGGCACTCCCCTaGTTGATTCCGTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEIWALP*LIPFSC
Trigger: GCAGGAAAACGGAATCAACCAGGGGAGTGCCCAGAT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTCAAAGTGCTGCTTCTaGACACGTCAGTGTACCACA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSKCCF*TRQCTT
Trigger: TGTGGTACACTGACGTGTCCAGAAGCAGCACTTTGA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGGTGTGCAAGTTGTTTaGAGTTTCCCTATGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLGVQVV*SFPMPE
Trigger: TTCTGGCATAGGGAAACTCCAAACAACTTGCACACC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAGTTCTCCTCTGTACTaGCCATGTCAGTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSSPLY*PCQSGS
Trigger: ACTACCAGACTGACATGGCCAGTACAGAGGAGAACT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 72 bp CGTGAAGAGCTTCTGTTGCTCTCACTGAAGGGCAGTTaGCATCTACCTCTTGGGAGTGAAGTCAATGCAATA +
Preference number: 4 (lower is better)
Translates to: REELLLLSLKGS*HLPLGSEVNAI
Trigger: TATTGCATTGACTTCACTCCCAAGAGGTAGATGCAAACTGCCCTTCAGTGAGAGCAACAGAAGCTCTTCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATATTGCTGTACAAGGATaGCAAACAAATCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYIAVQG*QTNLQL
Trigger: AAGCTGCAGATTTGTTTGTCATCCTTGTACAGCAAT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGTGAGAAATACCCTATaGAAACAGCACGTCGATTTC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLVRNTL*KQHVDF
Trigger: GAAATCGACGTGCTGTTTTCATAGGGTATTTCTCAC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAGGTGGTTCGTCTTCTaGCTTCTCCAGTTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGRWFVF*LLQFAA
Trigger: AGCCGCAAACTGGAGAAGTCAGAAGACGAACCACCT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTTCAAAACCCACAAATaGTATTTCGGATCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYFKTHK*YFGSLG
Trigger: TCCCAGAGATCCGAAATATCATTTGTGGGTTTTGAA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTCTCTGCAAGCATGCTaGGAGGGTAATGAAATTCGA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSLQAC*EGNEIR
Trigger: TCGAATTTCATTACCCTCTCAGCATGCTTGCAGAGA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCTGAGAAAGAGGTGTaGAAGGTTCCGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPEKEV*KVPQSP
Trigger: GGGACTCTGCGGAACCTTTCACACCTCTTTCTCAGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGATAATGAGTCCTGTTTaGTTGGTAGCCTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWIMSPV*LVAWIP
Trigger: AGGGATCCAGGCTACCAATCAAACAGGACTCATTAT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACTGACAGGACTATCTTaGAACCTCCTTTCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTELTGLS*NLLSAD
Trigger: GTCAGCCGAAAGGAGGTTTCAAGATAGTCCTGTCAG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTCCACTGGCTGGAAATaGAGACTGTCTAATCTGAAG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSTGWK*RLSNLK
Trigger: CTTCAGATTAGACAGTCTTCATTTCCAGCCAGTGGA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTGGATGAACATTCACTaGGTACTGTTCACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWWMNIH*VLFTGS
Trigger: GCTACCTGTGAACAGTACGCAGTGAATGTTCATCCA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGAGGCAGGCATTCGTTaGTCCGCTCTTGGTTGGATT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTEAGIR*SALGWI
Trigger: AATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCAATCCTCTCTACGGTaGTGGAGTCGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDQSSLR*WSRSSG
Trigger: ACCTGAAGATCGACTCCAGCACCGTAGAGAGGATTG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACGTGGAAAAAGCATATaGACCAGTCTCCTGCGACAC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTERGKSI*TSLLRH
Trigger: GTGTCGCAGGAGACTGGTGCATATGCTTTTTCCACG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAATAAGCAGTATGACTaGAAGAATGAGCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWNKQYD*KNEPTQ
Trigger: CTGGGTGGGCTCATTCTTGCAGTCATACTGCTTATT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCCTAATAATTGCAAGTaGCCTGAGCAGAATATATGG +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYPNNCK*PEQNIW
Trigger: CCATATATTCTGCTCAGGGCACTTGCAATTATTAGG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAGGGGCCTGCCCACTTaGAGAAAAGACCGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGRGLPT*RKDRGK
Trigger: TTTTCCACGGTCTTTTCTGCAAGTGGGCAGGCCCCT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGGGGCCTGCCCACTTaGAGAAAAGACCGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTRGLPT*RKDRGK
Trigger: TTTTCCACGGTCTTTTCTGCAAGTGGGCAGGCCCCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGCTGTCGGTAAATATTaGAAAGTGGACATAGTACAG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQAVGKY*KVDIVQ
Trigger: CTGTACTATGTCCACTTTGCAATATTTACCGACAGC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTTTGGAGTTTCCCTATaGCAGAAACACAACACTGTC +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLFGVSL*QKHNTV
Trigger: GACAGTGTTGTGTTTCTGGCATAGGGAAACTCCAAA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGAGCTTCTTGGTAACTaGTCTGAAGACAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWELLGN*SEDNSL
Trigger: CAAGCTGTTGTCTTCAGAGCAGTTACCAAGAAGCTC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACGCCAACAGCAGCTCTaGATGAACATTCACTGCGTA +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTERQQQL*MNIHCV
Trigger: TACGCAGTGAATGTTCATCCAGAGCTGCTGTTGGCG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAGTAGTCCAGCCCTGTaGACAATGCTTTGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSSPAL*TMLCVN
Trigger: GTTTACACAAAGCATTGTCCACAGGGCTGGACTACT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATCCTCTCTACGGTGCTaGAGTCGATCTTCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTSSLRC*SRSSGR
Trigger: ACGACCTGAAGATCGACTCCAGCACCGTAGAGAGGA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTTCTCAGAGAGCATCTaGGCACTCCCCTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDFSESI*ALPWLI
Trigger: AATCAACCAGGGGAGTGCCCAGATGCTCTCTGAGAA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCAATCCCATTTTCTCTaGAAACTTCAGTTCGCCATT +
Preference number: 4 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYQSHFL*KLQFAI
Trigger: AATGGCGAACTGAAGTTTCCAGAGAAAATGGGATTG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGAGAACAAAGTCTATGTaGCAGCCCGTATTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLRTKSM*QPVFLL
Trigger: TAAGAGGAATACGGGCTGCCACATAGACTTTGTTCT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCGAAGAAACCGAATTaGGCCATGGAGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPKKPN*AMESAG
Trigger: GCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACGAAGGCCTTCAGATTaGCCACAGAAAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTERRPSD*PQKRRQ
Trigger: CTGTCTCCTTTTCTGTGGCCAATCTGAAGGCCTTCG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACACGAAGATTTTGCTTaGGTAGAAAGGGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEHEDFA*VERVAV
Trigger: CACTGCCACCCTTTCTACTCAAGCAAAATCTTCGTG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCACCACAACACCCTGGTaGCATCGCTGCACTAGTAAA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGTTTPW*HRCTSK
Trigger: TTTACTAGTGCAGCGATGTCACCAGGGTGTTGTGGT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGCATATGCCTTGAACTaGTTCTCAGACATCAAAGTG +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWAYALN*FSDIKV
Trigger: CACTTTGATGTCTGAGAATCAGTTCAAGGCATATGC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGACTCTGCATATGCCTTaGACTGATTCTCAGACATCA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWTLHMP*TDSQTS
Trigger: TGATGTCTGAGAATCAGTTCAAGGCATATGCAGAGT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAGCTACTGTTCATCTTaGACATGCAGCATTATATTG +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQSYCSS*TCSIIL
Trigger: CAATATAATGCTGCATGTTCAAGATGAACAGTAGCT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCTGCAGTGGAAGACTTaGGTCCTTTCAGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWLQWKT*VLSDKK
Trigger: TTTCTTATCTGAAAGGACTCAAGTCTTCCACTGCAG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCTGGGCCAGAAAACTaGAAGAGTAGGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPGPEN*KSRWFL
Trigger: CAGGAACCACCTACTCTTTCAGTTTTCTGGCCCAGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACAATCCTCTCTACGGTaGTGGAGTCGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTQSSLR*WSRSSG
Trigger: ACCTGAAGATCGACTCCAGCACCGTAGAGAGGATTG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATTGATTCCGTTTTCCTaGTCGGCATACCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTELIPFS*SAYLCL
Trigger: CAGACACAGGTATGCCGAGCAGGAAAACGGAATCAA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTCCTTTCCCCCACGCTaGCTCTACTTGCCTACATTA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGSFPPR*LYLPTL
Trigger: TAATGTAGGCAAGTAGAGGCAGCGTGGGGGAAAGGA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACGTGGAAAAAGCATATaGACCAGTCTCCTGCGACAC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTRGKSI*TSLLRH
Trigger: GTGTCGCAGGAGACTGGTGCATATGCTTTTTCCACG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGAGCAGTCAAAGTGCTaGTTCTGGACACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGEQSKC*FWTRQC
Trigger: ACACTGACGTGTCCAGAAGCAGCACTTTGACTGCTC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTGGTGCAAATTGAAGTaGAAAGGGTTTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWWCKLK*KGFQKA
Trigger: TGCCTTCTGAAACCCTTTGCACTTCAATTTGCACCA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGTTGAACCATTTGTATaGAAGTCATGGGGACATGAA +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLVEPFV*KSWGHE
Trigger: TTCATGTCCCCATGACTTGCATACAAATGGTTCAAC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGCCTATACTTCACCATaGAGACTTCCCACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTAYTSP*RLPTGS
Trigger: AGAGCCTGTGGGAAGTCTCCATGGTGAAGTATAGGC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATGCTCCGCTCTTGGTTaGATTTCATTTTTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTECSALG*ISFFAV
Trigger: GACGGCGAAAAATGAAATCCAACCAAGAGCGGAGCA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATCAGACTGCCCATGTTaGCCAGCAGAGTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSDCPC*PAEWNR
Trigger: CCTATTCCACTCTGCTGGCCAACATGGGCAGTCTGA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGGAGAACTGGAAATGTaGACGTACTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTGELEM*TYWFCW
Trigger: CCAGCAGAACCAGTACGTCCACATTTCCAGTTCTCC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGGAGAACTGGAAATGTaGACGTACTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGGELEM*TYWFCW
Trigger: CCAGCAGAACCAGTACGTCCACATTTCCAGTTCTCC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATGTTCTGCGGAGAACTaGAAATGTGGACGTACTGGT +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTECSAEN*KCGRTG
Trigger: ACCAGTACGTCCACATTTCCAGTTCTCCGCAGAACA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGAGCCCGCTAAGACCTaGCTTTTTGTGACAGATGTG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTEPAKT*LFVTDV
Trigger: CACATCTGTCACAAAAAGCCAGGTCTTAGCGGGCTC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGTGTCACCTAATACTTaGTATTCTGGAGGACAGTAT +
Preference number: 4 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLVSPNT*YSGGQY
Trigger: ATACTGTCCTCCAGAATACCAAGTATTAGGTGACAC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGATTTACCCCACTCCTaGGCCAGAAAACTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDDLPHS*ARKLKE
Trigger: CTCTTTCAGTTTTCTGGCCCAGGAGTGGGGTAAATC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGTGTCTGTTTTCCCTTaGCCTGTGGGAGGCATATGG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRVSVFP*PVGGIW
Trigger: CCATATGCCTCCCACAGGCCAAGGGAAAACAGACAC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 72 bp AAAAGAAATCTCAGCTCCGGAGTAGAGGTGTGCAAGTaGTTTGGAGTTTCCCTATGCCAGAAACACAACACT +
Preference number: 4 (lower is better)
Translates to: KRNLSSGVEVCK*FGVSLCQKHNT
Trigger: AGTGTTGTGTTTCTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 72 bp AATATCCCCACAGCTGTCCAGTTTCCACTGTCCGGCTaGATTTTTGGACAGGAATACTATTCTGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: NIPTAVQFPLSG*IFGQEYYSEKM
Trigger: CATCTTCTCAGAATAGTATTCCTGTCCAAAAATCAAGCCGGACAGTGGAAACTGGACAGCTGTGGGGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAACAGCAGCTCTGGATaGACATTCACTGCGTACTGT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGNSSSG*TFTAYC
Trigger: ACAGTACGCAGTGAATGTTCATCCAGAGCTGCTGTT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCAAATCTTAACCTCCTaGGGAATTAGAGAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWQILTS*GIREGL
Trigger: TAAGCCTTCTCTAATTCCTCAGGAGGTTAAGATTTG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAGATACAGTACTTGTTaGATGAGAGACCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWRYSTC*MRDQDA
Trigger: AGCATCTTGGTCTCTCATTCAACAAGTACTGTATCT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACTGATCCTTGTAAGCTaGACGGCACCGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTLILVS*TAPKNF
Trigger: GAAATTCTTCGGTGCCGTTCAGCTTACAAGGATCAG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGCTGCTTGTGGTTCATaGAACAGTAGCCATGACAAC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTAACGS*NSSHDN
Trigger: GTTGTCATGGCTACTGTTTCATGAACCACAAGCAGC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGAAAGAAAACGTGGGTaGAGCCTCCAATGTATCTGC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGERKRG*SLQCIC
Trigger: GCAGATACATTGGAGGCTTCACCCACGTTTTCTTTC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTGTTTTGGATCCCCCTaGAGTGAAACAGGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGCFGSP*SETGPV
Trigger: TACAGGACCTGTTTCACTGCAGGGGGATCCAAAACA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCTCTTGTTCCTGGTCTaGAGCAGCACTAAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDLLFLV*SSTKFE
Trigger: TTCAAACTTAGTGCTGCTGCAGACCAGGAACAAGAG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCAGGCTTCCCTAAATaGAGGCCACTTTTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPGFPK*RPLLSL
Trigger: CAACGACAAAAGTGGCCTGCATTTAGGGAAGCCTGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATTGATTCCGTTTTCCTaGTCGGCATACCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTLIPFS*SAYLCL
Trigger: CAGACACAGGTATGCCGAGCAGGAAAACGGAATCAA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATTAACTTTCCAAATCTaGCATCTGACGCGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTLTFQI*HLTRLR
Trigger: GCGGAGACGCGTCAGATGGCAGATTTGGAAAGTTAA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGAATGAGAGACCAAGATaGTTGGTAATAAAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQNERPR*LVIKCE
Trigger: TTCACACTTTATTACCAAGCATCTTGGTCTCTCATT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTGCTACATTTATTTATaGTCGTTCAGTCCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWCYIYL*SFSPPN
Trigger: GTTTGGGGGACTGAACGAGCATAAATAAATGTAGCA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAACCAGTCTGTTGAGCTaGTTGTGGTTCATGAAACAG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTETSLLS*LWFMKQ
Trigger: CTGTTTCATGAACCACAAGCAGCTCAACAGACTGGT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCCTGTTTTCACCTGGTaGAAATTGAAGTGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDPVFTW*KLKCKG
Trigger: CCCTTTGCACTTCAATTTGCACCAGGTGAAAACAGG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGAGCTTCTTGGTAACTaGTCTGAAGACAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDELLGN*SEDNSL
Trigger: CAAGCTGTTGTCTTCAGAGCAGTTACCAAGAAGCTC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCACCAGAGAAAACCTGTaGACCGAGCTTCTTGGTAAC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGTRENL*TELLGN
Trigger: GTTACCAAGAAGCTCGGTGCACAGGTTTTCTCTGGT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTGCTCCGCTCTTGGTTaGATTTCATTTTTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGCSALG*ISFFAV
Trigger: GACGGCGAAAAATGAAATCCAACCAAGAGCGGAGCA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTCGTTGCTCCGCTCTTaGTTGGATTTCATTTTTCGC +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDSLLRS*LDFIFR
Trigger: GCGAAAAATGAAATCCAACCAAGAGCGGAGCAACGA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATTCTCAGAGAGCATCTaGGCACTCCCCTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRFSESI*ALPWLI
Trigger: AATCAACCAGGGGAGTGCCCAGATGCTCTCTGAGAA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAACTGACAGACACTCGTaGAAAAAGCATATGCACCAG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTETDRHS*KKHMHQ
Trigger: CTGGTGCATATGCTTTTTCCACGAGTGTCTGTCAGT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 72 bp AAAAAGATTTCGCAAACTCAACGTGAAGAGCTTCTGTaGCTCTCACTGAAGGGCAGTTTGCATCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: KKISQTQREELL*LSLKGSLHLPL
Trigger: AAGAGGTAGATGCAAACTGCCCTTCAGTGAGAGCAACAGAAGCTCTTCACGTTGAGTTTGCGAAATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGTGAGAAATACCCTATaGAAACAGCACGTCGATTTC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEVRNTL*KQHVDF
Trigger: GAAATCGACGTGCTGTTTTCATAGGGTATTTCTCAC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATACTCTGCATATGCCTTaGACTGATTCTCAGACATCA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDTLHMP*TDSQTS
Trigger: TGATGTCTGAGAATCAGTTCAAGGCATATGCAGAGT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGAATCCAAACATTCCTTaGAATTGTACAACCCTACTC +
Preference number: 4 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWNPNIP*NCTTLL
Trigger: GAGTAGGGTTGTACAATTTCAAGGAATGTTTGGATT...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGAAGACTGTCTAATCTaGAGGTCACCACAAATACTG +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEEDCLI*RSPQIL
Trigger: CAGTATTTGTGGTGACCTTCAGATTAGACAGTCTTC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATGTTTTGGATCCCCCTaGAGTGAAACAGGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRCFGSP*SETGPV
Trigger: TACAGGACCTGTTTCACTGCAGGGGGATCCAAAACA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTTTCAAGACCATCCGTaGAGGCTGAAATCCACTCTT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGFQDHP*RLKSTL
Trigger: AAGAGTGGATTTCAGCCTGCACGGATGGTCTTGAAA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACATCAAAGTGAAAAGTaGCTCCCGTCAGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTHQSEK*LPSGST
Trigger: AGTACTACCTGACGGGAGGCACTTTTCACTTTGATG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTGCCAACTCTGCATATaGCTTGAACTGATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDCQLCI*LELILR
Trigger: TCTGAGAATCAGTTCAAGGCATATGCAGAGTTGGCA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTGGTGCAAATTGAAGTaGAAAGGGTTTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDWCKLK*KGFQKA
Trigger: TGCCTTCTGAAACCCTTTGCACTTCAATTTGCACCA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAATTGTAAGTGGGGGTaGTTAATATCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTNCKWG*LISPQL
Trigger: CAGCTGTGGGGATATTAAGCACCCCCACTTACAATT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAACCAGAGAAAACCTGTaGACCGAGCTTCTTGGTAAC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRTRENL*TELLGN
Trigger: GTTACCAAGAAGCTCGGTGCACAGGTTTTCTCTGGT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTCGTTGCTCCGCTCTTaGTTGGATTTCATTTTTCGC +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGSLLRS*LDFIFR
Trigger: GCGAAAAATGAAATCCAACCAAGAGCGGAGCAACGA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCGTCAGGTAGTACTTaGTGGTCATTTATTGTCACA +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPSGST*WSFIVT
Trigger: TGTGACAATAAATGACCACCAAGTACTACCTGACGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAAAGACCGTGGAAAATaGGTTGACTCCAGGCTACAT +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGKDRGK*VDSRLH
Trigger: ATGTAGCCTGGAGTCAACCCATTTTCCACGGTCTTT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATCAAAGTGCTGCTTCTaGACACGTCAGTGTACCACA +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSKCCF*TRQCTT
Trigger: TGTGGTACACTGACGTGTCCAGAAGCAGCACTTTGA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGTTCTCCTCTGTACTaGCCATGTCAGTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSSPLY*PCQSGS
Trigger: ACTACCAGACTGACATGGCCAGTACAGAGGAGAACT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCTTTCACAGAGAAGTaGGAAATACCCTATGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPFTEK*EIPYEN
Trigger: GTTTTCATAGGGTATTTCTCACTTCTCTGTGAAAGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATCTACCTCTTGGGAGTaGAGTCAATGCAATAACCTG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSTSWE*SQCNNL
Trigger: CAGGTTATTGCATTGACTTCACTCCCAAGAGGTAGA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATTCCTCACCCATATCTaGAATAGCACGGTATTAGTG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTFLTHI*NSTVLV
Trigger: CACTAATACCGTGCTATTTCAGATATGGGTGAGGAA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGGTCACCACAAATACTaGCAGGACTATCTTGAAACC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRGHHKY*QDYLET
Trigger: GGTTTCAAGATAGTCCTGTCAGTATTTGTGGTGACC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATGCTACATTTATTTATaGTCGTTCAGTCCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTECYIYL*SFSPPN
Trigger: GTTTGGGGGACTGAACGAGCATAAATAAATGTAGCA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATACATGGCTCCAGAGTaGGTCTTAGAAATGAATCTG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTYMAPE*VLEMNL
Trigger: CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCCCAACTGAGAGTTTaGAACACGGCAAATCAAAGA +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPQLRV*NTANQR
Trigger: TCTTTGATTTGCCGTGTTCCAAACTCTCAGTTGGGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTCTCTGCACTCTGGATaGAATCTTCTGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDSLHSG*NLLFLS
Trigger: ACTTAAAAACAGAAGATTTCATCCAGAGTGCAGAGA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGTCAATGCAATAACCTaGTTGGTTTTCCTAACACTG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGVNAIT*LVFLTL
Trigger: CAGTGTTAGGAAAACCAATCAGGTTATTGCATTGAC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGCAATTCTGCAGAGCTaGAATGTAGTTACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRAILQS*NVVTVL
Trigger: CAACACTGTAACTACATTTCAGCTCTGCAGAATTGC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGCATATGCCTTGAACTaGTTCTCAGACATCAAAGTG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRAYALN*FSDIKV
Trigger: CACTTTGATGTCTGAGAATCAGTTCAAGGCATATGC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTTCAAAACCCACAAATaGTATTTCGGATCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGFKTHK*YFGSLG
Trigger: TCCCAGAGATCCGAAATATCATTTGTGGGTTTTGAA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAAATCCAAACATTCCTTaGAATTGTACAACCCTACTC +
Preference number: 4 (lower is better)
Translates to: SSNALTKGFTPLLGQKTENPNIP*NCTTLL
Trigger: GAGTAGGGTTGTACAATTTCAAGGAATGTTTGGATT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATTCCTCACCCATATCTaGAATAGCACGGTATTAGTG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRFLTHI*NSTVLV
Trigger: CACTAATACCGTGCTATTTCAGATATGGGTGAGGAA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGGAACAGGAAGTGCTaGAAATGTCAAACATCATCT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTRNRKC*KCQTSS
Trigger: AGATGATGTTTGACATTTTCAGCACTTCCTGTTCCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATACAGGAATACTATTCTaGGAAGATGCTCCGTATTTA +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDTGILF*EDAPYL
Trigger: TAAATACGGAGCATCTTCTCAGAATAGTATTCCTGT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATGCCAACTCTGCATATaGCTTGAACTGATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRCQLCI*LELILR
Trigger: TCTGAGAATCAGTTCAAGGCATATGCAGAGTTGGCA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATACAAAACCTAATAATTaGAAGTGCCCTGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDTKPNN*KCPEQN
Trigger: ATTCTGCTCAGGGCACTTGCAATTATTAGGTTTTGT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATACATGGCTCCAGAGTaGGTCTTAGAAATGAATCTG +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRYMAPE*VLEMNL
Trigger: CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGTTGAACCATTTGTATaGAAGTCATGGGGACATGAA +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTVEPFV*KSWGHE
Trigger: TTCATGTCCCCATGACTTGCATACAAATGGTTCAAC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGATACAGTACTTGTTaGATGAGAGACCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRRYSTC*MRDQDA
Trigger: AGCATCTTGGTCTCTCATTCAACAAGTACTGTATCT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR TCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGCTACTGTTCATCTTaGACATGCAGCATTATATTG +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTSYCSS*TCSIIL
Trigger: CAATATAATGCTGCATGTTCAAGATGAACAGTAGCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCTTATCTCTGCACTCTaGATGAAATCTTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDLISAL*MKSSVF
Trigger: AAAAACAGAAGATTTCATCCAGAGTGCAGAGATAAG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAACTATATAGCACACTaGTCAGACTCTATTGGCACA +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRNYIAH*SDSIGT
Trigger: TGTGCCAATAGAGTCTGACCAGTGTGCTATATAGTT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAATGAGAGACCAAGATaGTTGGTAATAAAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGNERPR*LVIKCE
Trigger: TTCACACTTTATTACCAAGCATCTTGGTCTCTCATT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAAACTTTCAATATCTTaGTCTTCAGCAATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GQYVILVRITVNNTSNEGKLSIS*SSAILQ
Trigger: CTGCAGAATTGCTGAAGAGCAAGATATTGAAAGTTT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATTTGTTCAGTTTAGTTaGAGCCATCCAAGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTFVQFS*SHPSKN
Trigger: ATTCTTACTTGGATGGCTGCAACTAAACTGAACAAA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 72 bp CATAATGAGTCCTGTTTGATTGGTAGCCTGGATCCCTaGTTACAAACACTTCGTGTTCAAGATTATATTCTT +
Preference number: 4 (lower is better)
Translates to: HNESCLIGSLDP*LQTLRVQDYIL
Trigger: AAGAATATAATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGACTCATTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATTTGTTCAGTTTAGTTaGAGCCATCCAAGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRFVQFS*SHPSKN
Trigger: ATTCTTACTTGGATGGCTGCAACTAAACTGAACAAA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR GCA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATTCTTTTCAATAAGGTaGAAAACATCATTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRFFSIR*KTSFLP
Trigger: GGGAAGGAATGATGTTTTGCACCTTATTGAAAAGAA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
3UTR CAA 72 bp ACAAGAAAAGATCCTATCATCAGTAAGGTAACGTATTaGAAGCGAGGTCATCTATGTAAAAGAAATCTCAGC +
Preference number: 4 (lower is better)
Translates to: TRKDPIISKVTY*KRGHLCKRNLS
Trigger: GCTGAGATTTCTTTTACATAGATGACCTCGCTTCAAATACGTTACCTTACTGATGATAGGATCTTTTCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp CTGCCGGCCCATGCCTCCCGCCCCCGTGGCCCCGGCCACCAGGGTTaGCCGGGAGCCATGCTGTGCCCTCCACCCGGTGGTTGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: LPAHASRPRGPGHQG*PGAMLCPPPGGCRW
Trigger: CCAGCGACAACCACCGGGTGGAGGGCACAGCATGGCTCCCGGGCAACCCTGGTGGCCGGGGCCACGGGGGCGGGAGGCATGGGCCGGCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS CCA 90 bp CCAAGCTCCACCGAGGTCCCTGCCGGCCCATGCCTCCCGCCCCCGTaGCCCCGGCCACCAGGGTTGCCCGGGAGCCATGCTGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PSSTEVPAGPCLPPP*PRPPGLPGSHAVPS
Trigger: GGAGGGCACAGCATGGCTCCCGGGCAACCCTGGTGGCCGGGGCCACGGGGGCGGGAGGCATGGGCCGGCAGGGACCTCGGTGGAGCTTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS GCA 90 bp CGTGCCTGGACTCGTACGGGTGAGGAACCGACTTGCCGCCTGCCTTaGCCAGGCCCAGGTCGGCTGAGGACGGGGCCCCGTACCGCCGGC +
Preference number: 5 (lower is better)
Translates to: RAWTRTGEEPTCRLP*PGPGRLRTGPRTAG
Trigger: GCCGGCGGTACGGGGCCCCGTCCTCAGCCGACCTGGGCCTGGGCAAGGCAGGCGGCAAGTCGGTTCCTCACCCGTACGAGTCCAGGCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp CGGCCACCAGGGTTGCCCGGGAGCCATGCTGTGCCCTCCACCCGGTaGTTGTCGCTGGGCAGGGTAGGGGCCTTCTCCTCGGAGGACCGG +
Preference number: 5 (lower is better)
Translates to: RPPGLPGSHAVPSTR*LSLGRVGAFSSEDR
Trigger: CCGGTCCTCCGAGGAGAAGGCCCCTACCCTGCCCAGCGACAACCACCGGGTGGAGGGCACAGCATGGCTCCCGGGCAACCCTGGTGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCCCCGGCCACCAGGGTaGCCCGGGAGCCATGCTGTG +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAPRPPG*PGSHAV
Trigger: CACAGCATGGCTCCCGGGCAACCCTGGTGGCCGGGG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp GGGTGGCGTACGCGGCAGGCAGCGTGGTGGCCACGGGGACAGACCTaGGAGCGCTGGGCGGGGAGTAGTCCAGCCCTGTGGACAATGCTT +
Preference number: 5 (lower is better)
Translates to: GWRTRQAAWWPRGQT*ERWAGSSPALWTML
Trigger: AAGCATTGTCCACAGGGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCGTGGCCACCACGCTGCCTGCCGCGTACGCCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS CCA 90 bp CCCAGGGTGAGCGTGTGTGGGATCATCGTCTGGTGGGGGTGGAGGTaGACGGGGATGGCCGGAGGAGAGGCGGTGCGGCCGGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: PRVSVCGIIVWWGWR*TGMAGGEAVRPVFC
Trigger: GCAGAACACCGGCCGCACCGCCTCTCCTCCGGCCATCCCCGTCCACCTCCACCCCCACCAGACGATGATCCCACACACGCTCACCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp GTGAGGAACCGACTTGCCGCCTGCCTTGCCCAGGCCCAGGTCGGCTaGGGACGGGGCCCCGTACCGCCGGCTCTTCTCCATCTCACCGTT +
Preference number: 5 (lower is better)
Translates to: VRNRLAACLAQAQVG*GRGPVPPALLHLTV
Trigger: AACGGTGAGATGGAGAAGAGCCGGCGGTACGGGGCCCCGTCCTCAGCCGACCTGGGCCTGGGCAAGGCAGGCGGCAAGTCGGTTCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp TCTGAGGGGCTCGGGTGGACCACCACGTGCCTGGACTCGTACGGGTaGGGAACCGACTTGCCGCCTGCCTTGCCCAGGCCCAGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: SEGLGWTTTCLDSYG*GTDLPPALPRPRSA
Trigger: AGCCGACCTGGGCCTGGGCAAGGCAGGCGGCAAGTCGGTTCCTCACCCGTACGAGTCCAGGCACGTGGTGGTCCACCCGAGCCCCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp GTTGGCCAGCAGAGTGGAATAGGCCTCCAGCTGGGAGCGCTGGGATaGAGTGGTGGCCCCTGCGGCCGAGGCCACTGCACTGGTGACGGG +
Preference number: 5 (lower is better)
Translates to: VGQQSGIGLQLGALG*SGGPCGRGHCTGDG
Trigger: CCCGTCACCAGTGCAGTGGCCTCGGCCGCAGGGGCCACCACTCCATCCCAGCGCTCCCAGCTGGAGGCCTATTCCACTCTGCTGGCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS TCA 90 bp CTGCTCGGCATACCTGTGTCTGCTGCCCGCCAGGCCGTCGGCCTTTaGGTGCTTCAGCAGGACGCTGGCGGGATCCACGGGCTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: LLGIPVSAARQAVGL*VLQQDAGGIHGLAL
Trigger: AAGGGCCAGCCCGTGGATCCCGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGACGGCCTGGCGGGCAGCAGACACAGGTATGCCGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGTCTTGCGGCTGCTGTaGCTCTGGCTGCTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAVLRLL*LWLLLH
Trigger: GTGGAGCAGCAGCCAGAGCAACAGCAGCCGCAAGAC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTGCGGGCGTGTTGCTGTaGGGCAGGACCATCACAGAG +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAAGVLL*GRTITE
Trigger: CTCTGTGATGGTCCTGCCCAACAGCAACACGCCCGC...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTACCTCCTCTTCCTCGTaGCCGCGGGCTTGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLATSSSS*PRACWV
Trigger: AACCCAGCAAGCCCGCGGCAACGAGGAAGAGGAGGT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCTCCCCCGGGTCTCCTaGGCTGGCTCTTTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLALPRVS*AGSFCN
Trigger: GTTGCAGAAAGAGCCAGCCAAGGAGACCCGGGGGAG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp TGGGCAGGACCATCACAGAGGCCCGGACCCCCGAAGGATCACGACTaGTGTAGTCTGAGGGGCTCGGGTGGACCACCACGTGCCTGGACT +
Preference number: 5 (lower is better)
Translates to: WAGPSQRPGPPKDHD*CSLRGSGGPPRAWT
Trigger: AGTCCAGGCACGTGGTGGTCCACCCGAGCCCCTCAGACTACAGCAGTCGTGATCCTTCGGGGGTCCGGGCCTCTGTGATGGTCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp ACGCGGCAGGCAGCGTGGTGGCCACGGGGACAGACCTGGGAGCGCTaGGCGGGGAGTAGTCCAGCCCTGTGGACAATGCTTTGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: TRQAAWWPRGQTWER*AGSSPALWTMLCVN
Trigger: GTTTACACAAAGCATTGTCCACAGGGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCGTGGCCACCACGCTGCCTGCCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS CCA 90 bp GAGTGGCCTGTTGCACCTCCAGGTCAGCTGCGGGCGTGTTGCTGTTaGGCAGGACCATCACAGAGGCCCGGACCCCCGAAGGATCACGAC +
Preference number: 5 (lower is better)
Translates to: EWPVAPPGQLRACCC*AGPSQRPGPPKDHD
Trigger: GTCGTGATCCTTCGGGGGTCCGGGCCTCTGTGATGGTCCTGCCCAACAGCAACACGCCCGCAGCTGACCTGGAGGTGCAACAGGCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCTGCTCTCAGCTTTCTaGGTGGCCTCCCGAGGGACA +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLALLSAF*VASRGT
Trigger: TGTCCCTCGGGAGGCCACCAAGAAAGCTGAGAGCAG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGCCGATGACAGGGGGTaGAGTCCCTGCGTAGAAGGC +
Preference number: 5 (lower is better)
Translates to: APALSIRSRGKVGGSLPPADDRG*SPCVEG
Trigger: GCCTTCTACGCAGGGACTCAACCCCCTGTCATCGGC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp GCTGCTGCTGCTGCTCAGCCTTGTGTCCCGGCGTCTGGCTCAGACTaGCCATGTTGGCCAGCAGAGTGGAATAGGCCTCCAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: AAAAAQPCVPASGSD*PCWPAEWNRPPAGS
Trigger: GCTCCCAGCTGGAGGCCTATTCCACTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGCCGGGACACAAGGCTGAGCAGCAGCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp AGGTGGACGGGGATGGCCGGAGGAGAGGCGGTGCGGCCGGTGTTCTaGGGAGAACTGGAAATGTGGACGTACTGGTTCTGCTGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: RWTGMAGGEAVRPVF*GELEMWTYWFCWAG
Trigger: ACCAGCCCAGCAGAACCAGTACGTCCACATTTCCAGTTCTCCGCAGAACACCGGCCGCACCGCCTCTCCTCCGGCCATCCCCGTCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp CACCGTTCAGGACCTCCTTGGCCTGGATGGCCTGCTGCAGCCGGCTaGTCTCAGCTTTCTTGGTGGCCTCCCGAGGGACAAAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: HRSGPPWPGWPAAAG*SQLSWWPPEGQSGC
Trigger: GCAGCCACTTTGTCCCTCGGGAGGCCACCAAGAAAGCTGAGAGCAGCCGGCTGCAGCAGGCCATCCAGGCCAAGGAGGTCCTGAACGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp CACGATGAGTGGCCTGTTGCACCTCCAGGTCAGCTGCGGGCGTGTTaGTGTTGGGCAGGACCATCACAGAGGCCCGGACCCCCGAAGGAT +
Preference number: 5 (lower is better)
Translates to: HDEWPVAPPGQLRAC*CWAGPSQRPGPPKD
Trigger: ATCCTTCGGGGGTCCGGGCCTCTGTGATGGTCCTGCCCAACAGCAACACGCCCGCAGCTGACCTGGAGGTGCAACAGGCCACTCATCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp AGGGGAGGCTTCACGATGAGTGGCCTGTTGCACCTCCAGGTCAGCTaGGGGCGTGTTGCTGTTGGGCAGGACCATCACAGAGGCCCGGAC +
Preference number: 5 (lower is better)
Translates to: RGGFTMSGLLHLQVS*GRVAVGQDHHRGPD
Trigger: GTCCGGGCCTCTGTGATGGTCCTGCCCAACAGCAACACGCCCGCAGCTGACCTGGAGGTGCAACAGGCCACTCATCGTGAAGCCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp TCGGCATACCTGTGTCTGCTGCCCGCCAGGCCGTCGGCCTTTGAGTaGTTCAGCAGGACGCTGGCGGGATCCACGGGCTGGCCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: SAYLCLLPARPSAFE*FSRTLAGSTGWPFL
Trigger: TAAAAAGGGCCAGCCCGTGGATCCCGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGACGGCCTGGCGGGCAGCAGACACAGGTATGCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp GCTGCTCAGCCTTGTGTCCCGGCGTCTGGCTCAGACTGCCCATGTTaGCCAGCAGAGTGGAATAGGCCTCCAGCTGGGAGCGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: AAQPCVPASGSDCPC*PAEWNRPPAGSAGM
Trigger: CATCCCAGCGCTCCCAGCTGGAGGCCTATTCCACTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGCCGGGACACAAGGCTGAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTTGAAGTTCTCGCTCTaGGGAAGGGCGGTGGTGACG +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLALKFSL*GRAVVT
Trigger: CGTCACCACCGCCCTTCCCAAGAGCGAGAACTTCAA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTGGGCACTCCCCTGGTaGATTCCGTTTTCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAWALPW*IPFSCS
Trigger: CGAGCAGGAAAACGGAATCAACCAGGGGAGTGCCCA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCTCGTTGCCGCGGGCTaGCTGGGTTCTATTTTGGTG +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLALVAAG*LGSILV
Trigger: CACCAAAATAGAACCCAGCAAGCCCGCGGCAACGAG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp CTCTTCTCCATCTCACCGTTCAGGACCTCCTTGGCCTGGATGGCCTaGTGCAGCCGGCTGCTCTCAGCTTTCTTGGTGGCCTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: LFSISPFRTSLAWMA*CSRLLSAFLVASRG
Trigger: CCCTCGGGAGGCCACCAAGAAAGCTGAGAGCAGCCGGCTGCAGCAGGCCATCCAGGCCAAGGAGGTCCTGAACGGTGAGATGGAGAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp CTCCAGTTTGCGGCTCTCTGGCGCCGACCACCTCCTCTTCCTCGTTaGCGCGGGCTTGCTGGGTTCTATTTTGGTGAGGAAGGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LQFAALWRRPPPLPR*RGLAGFYFGEEGRC
Trigger: GCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAAGCCCGCGGCAACGAGGAAGAGGAGGTGGTCGGCGCCAGAGAGCCGCAAACTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTAGGCCACTTTTGTCGTaGAGGGTAGAAGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLARPLLS*RVEGEA
Trigger: AGCCTCCCCTTCTACCCTCAACGACAAAAGTGGCCT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGAGGGGCCTGCCCACTaGCAGAAAAGACCGTGGAAA +
Preference number: 5 (lower is better)
Translates to: APALSIRSRGKVGGSLPPEGPAH*QKRPWK
Trigger: TTTCCACGGTCTTTTCTGCAAGTGGGCAGGCCCCTC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp TTCTCCATCTCACCGTTCAGGACCTCCTTGGCCTGGATGGCCTGCTaGAGCCGGCTGCTCTCAGCTTTCTTGGTGGCCTCCCGAGGGACA +
Preference number: 5 (lower is better)
Translates to: FSISPFRTSLAWMAC*SRLLSAFLVASRGT
Trigger: TGTCCCTCGGGAGGCCACCAAGAAAGCTGAGAGCAGCCGGCTGCAGCAGGCCATCCAGGCCAAGGAGGTCCTGAACGGTGAGATGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp CGGTGCTCCCCGACGGCGAACTGTATCACGGCCACGCCCGGGCTATaGCTGTCTTCAATCCTCTCTACGGTGCTGGAGTCGATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RCSPTANCITATPGL*LSSILSTVLESIFR
Trigger: CCTGAAGATCGACTCCAGCACCGTAGAGAGGATTGAAGACAGCCATAGCCCGGGCGTGGCCGTGATACAGTTCGCCGTCGGGGAGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCCCCTCCACCCGGTGGTaGTCGCTGGGCAGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAPSTRW*SLGRVG
Trigger: CCCTACCCTGCCCAGCGACAACCACCGGGTGGAGGG...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGACTTGCCGCCTGCCTaGCCCAGGCCCAGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLADLPPA*PRPRSA
Trigger: AGCCGACCTGGGCCTGGGCAAGGCAGGCGGCAAGTC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTCGTGAAGAGCTTCTGTaGCTCTCACTGAAGGGCAGT +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAREELL*LSLKGS
Trigger: ACTGCCCTTCAGTGAGAGCAACAGAAGCTCTTCACG...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp TGCAGGCCACTTTTGTCGTTGAGGGTAGAAGGGGAGGCTTCACGATaGGTGGCCTGTTGCACCTCCAGGTCAGCTGCGGGCGTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: CRPLLSLRVEGEASR*VACCTSRSAAGVLL
Trigger: CAGCAACACGCCCGCAGCTGACCTGGAGGTGCAACAGGCCACTCATCGTGAAGCCTCCCCTTCTACCCTCAACGACAAAAGTGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp CCTTCTCCTCGGAGGACCGGCTGGTGGCGGGGATCTCGCGCTTCTTaGGAGGCAGGCATTCGTTGCTCCGCTCTTGGTTGGATTTCATTT +
Preference number: 5 (lower is better)
Translates to: PSPRRTGWWRGSRAS*EAGIRCSALGWISF
Trigger: AAATGAAATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGTCCTCCGAGGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCCCTCCACCCGGTGGTaGTCGCTGGGCAGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQPSTRW*SLGRVG
Trigger: CCCTACCCTGCCCAGCGACAACCACCGGGTGGAGGG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGGACTTGCCGCCTGCCTaGCCCAGGCCCAGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQDLPPA*PRPRSA
Trigger: AGCCGACCTGGGCCTGGGCAAGGCAGGCGGCAAGTC...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTAAAGTGGCACCCGAGTaGTCCATAGTCATGAACTAT +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAKVAPE*SIVMNY
Trigger: ATAGTTCATGACTATGGACAACTCGGGTGCCACTTT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTTCACCTGGTGCAAATaGAAGTGCAAAGGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAFTWCK*KCKGFQ
Trigger: CTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAGGTGTGCAAGTTGTTaGGAGTTTCCCTATGCCAGA +
Preference number: 5 (lower is better)
Translates to: APALSIRSRGKVGGSLPPRCASC*EFPYAR
Trigger: TCTGGCATAGGGAAACTCCAAACAACTTGCACACCT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTGTAGAGGTGTGCAAGTaGTTTGGAGTTTCCCTATGC +
Preference number: 5 (lower is better)
Translates to: APALSIRSRGKVGGSLPPVEVCK*FGVSLC
Trigger: GCATAGGGAAACTCCAAACAACTTGCACACCTCTAC...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTTTTCCACTGTCCGGCTaGATTTTTGGACAGGAATAC +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAFPLSG*IFGQEY
Trigger: GTATTCCTGTCCAAAAATCAAGCCGGACAGTGGAAA...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp TCGGCCTTTGAGTGCTTCAGCAGGACGCTGGCGGGATCCACGGGCTaGCCCTTTTTAACAGAGCCGTTCTTCAGGTTCTTGAGGGTAAGC +
Preference number: 5 (lower is better)
Translates to: SAFECFSRTLAGSTG*PFLTEPFFRFLRVS
Trigger: GCTTACCCTCAAGAACCTGAAGAACGGCTCTGTTAAAAAGGGCCAGCCCGTGGATCCCGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGGGATCTCGCGCTTCTaGGGAGGCAGGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAGISRF*GGRHSL
Trigger: CAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCCCCGGCCACCAGGGTaGCCCGGGAGCCATGCTGTG +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWPRPPG*PGSHAV
Trigger: CACAGCATGGCTCCCGGGCAACCCTGGTGGCCGGGG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp TCACGGCCACGCCCGGGCTATGGCTGTCTTCAATCCTCTCTACGGTaGTGGAGTCGATCTTCAGGTCGTTGCTTATCTCTGCACTCTGGA +
Preference number: 5 (lower is better)
Translates to: SRPRPGYGCLQSSLR*WSRSSGRCLSLHSG
Trigger: TCCAGAGTGCAGAGATAAGCAACGACCTGAAGATCGACTCCAGCACCGTAGAGAGGATTGAAGACAGCCATAGCCCGGGCGTGGCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp CGGGGACAGACCTGGGAGCGCTGGGCGGGGAGTAGTCCAGCCCTGTaGACAATGCTTTGTGTAAACCTATTCCCTGTTGTAAACCAAGCT +
Preference number: 5 (lower is better)
Translates to: RGQTWERWAGSSPAL*TMLCVNLFPVVNQA
Trigger: AGCTTGGTTTACAACAGGGAATAGGTTTACACAAAGCATTGTCCACAGGGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGGAGGCAGGCATTCGTaGCTCCGCTCTTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAGGRHS*LRSWLD
Trigger: ATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTGCTGCTGCTCAGCCTaGTGTCCCGGCGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYCCCSA*CPGVWL
Trigger: GAGCCAGACGCCGGGACACAAGGCTGAGCAGCAGCA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATGCCGGAGTCGGCGTATaGCATGACGACCTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYAGVGV*HDDLGG
Trigger: CCCTCCCAGGTCGTCATGCAATACGCCGACTCCGGC...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGCCGTTCAGGACCTCCTaGGCCTGGATGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQPFRTS*AWMACC
Trigger: GCAGCAGGCCATCCAGGCCAAGGAGGTCCTGAACGG...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCACCAGGGCCTCAGGGTaGAAGTTCTCGCTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLATRASG*KFSLLG
Trigger: TCCCAAGAGCGAGAACTTCAACCCTGAGGCCCTGGT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCCAGGCCGTCGGCCTTaGAGTGCTTCAGCAGGACGC +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLPGRRP*SASAGR
Trigger: GCGTCCTGCTGAAGCACTCAAAGGCCGACGGCCTGG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGACCTCCTCTTCCTCGTaGCCGCGGGCTTGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQTSSSS*PRACWV
Trigger: AACCCAGCAAGCCCGCGGCAACGAGGAAGAGGAGGT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CCGTGTGGTGACAGGGGACACTGCGGTTCCTCCCCCGGGTCTCCTTGGCTGGCTATACCCTTTCTGGGTTaGTACCAAACATTAAATCTC +
Preference number: 5 (lower is better)
Translates to: PCGDRGHCGSSPGSPWLAIPFLG*YQTLNL
Trigger: GAGATTTAATGTTTGGTACAAACCCAGAAAGGGTAT...AGCCAGCCAAGGAGACCCGGGGGAGGAACCGCAGTGTCCCCTGTCACCACACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAAACATTCCTTGAAATaGTACAACCCTACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: APALSIRSRGKVGGSLPPKHSLK*YNPTPE
Trigger: CTCTGGAGTAGGGTTGTACAATTTCAAGGAATGTTT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAGTAAGGTAACGTATTaGAAGCGAGGTCATCTATGT +
Preference number: 5 (lower is better)
Translates to: APALSIRSRGKVGGSLPPSKVTY*KRGHLC
Trigger: ACATAGATGACCTCGCTTCAAATACGTTACCTTACT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGGTGTCTGTTTTCCCTaGGCCTGTGGGAGGCATATG +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAGVCFP*ACGRHM
Trigger: CATATGCCTCCCACAGGCCAAGGGAAAACAGACACC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp ACCTCCTCTTCCTCGTTGCCGCGGGCTTGCTGGGTTCTATTTTGGTaGGGAAGGGCGCTGCAGGCAATCCCATTTTCTCTGGAAACTTCA +
Preference number: 5 (lower is better)
Translates to: TSSSSLPRACWVLFW*GRALQAIPFSLETS
Trigger: TGAAGTTTCCAGAGAAAATGGGATTGCCTGCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAAGCCCGCGGCAACGAGGAAGAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp CAGACATCCCCAACTGAGAGTTTGGAACACGGCAAATCAAAGAGCTaGCTGGTTCTCTCCGGACAGCAGGATGACCAGCCCTGTCCAAAC +
Preference number: 5 (lower is better)
Translates to: QTSPTESLEHGKSKS*LVLSGQQDDQPCPN
Trigger: GTTTGGACAGGGCTGGTCATCCTGCTGTCCGGAGAGAACCAGCCAGCTCTTTGATTTGCCGTGTTCCAAACTCTCAGTTGGGGATGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GCCCCAGCACTCAGCATCCGCAGCAGGGGAAAGGTGGGAGGCTCTCTCCCTCCTAATGGTCTAATTTCTTaGGAAAACTGTACCATGTGC +
Preference number: 5 (lower is better)
Translates to: APALSIRSRGKVGGSLPPNGLIS*ENCTMC
Trigger: GCACATGGTACAGTTTTCCAAAGAAATTAGACCATT...AGGAGGGAGAGAGCCTCCCACCTTTCCCCTGCTGCGGATGCTGAGTGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATCTGCTCTCAGCTTTCTaGGTGGCCTCCCGAGGGACA +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYLLSAF*VASRGT
Trigger: TGTCCCTCGGGAGGCCACCAAGAAAGCTGAGAGCAG...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTCTGACTTCTCCAGTTaGCGGCTCTCTGGCGCCGAC +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSDFSS*RLSGAD
Trigger: GTCGGCGCCAGAGAGCCGCAAACTGGAGAAGTCAGA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATGGAGGCAGGCATTCGTaGCTCCGCTCTTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYGGRHS*LRSWLD
Trigger: ATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCC...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGACGATGAGTGGCCTGTaGCACCTCCAGGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLTMSGL*HLQVSC
Trigger: GCAGCTGACCTGGAGGTGCAACAGGCCACTCATCGT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCAAATGCAGGCCACTTTaGTCGTTGAGGGTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAKCRPL*SLRVEG
Trigger: CCCTTCTACCCTCAACGACAAAAGTGGCCTGCATTT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGTTGAAGTTCTCGCTCTaGGGAAGGGCGGTGGTGACG +
Preference number: 5 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQLKFSL*GRAVVT
Trigger: CGTCACCACCGCCCTTCCCAAGAGCGAGAACTTCAA...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCTTCCTGATGTTGATTTaGCACGTGGGAACCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAFLMLI*HVGTPG
Trigger: TCCTGGGGTTCCCACGTGCAAAATCAACATCAGGAA...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGGGATCTCGCGCTTCTaGGGAGGCAGGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWGISRF*GGRHSL
Trigger: CAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGCCGGAGTCGGCGTATaGCATGACGACCTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEAGVGV*HDDLGG
Trigger: CCCTCCCAGGTCGTCATGCAATACGCCGACTCCGGC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCAGGCCGTCGGCCTTaGAGTGCTTCAGCAGGACGC +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPGRRP*SASAGR
Trigger: GCGTCCTGCTGAAGCACTCAAAGGCCGACGGCCTGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGCCACGCTGCCTCTACTaGCCTACATTAGACCGGCCT +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLPRCLY*PTLDRP
Trigger: AGGCCGGTCTAATGTAGGCAAGTAGAGGCAGCGTGG...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp GGAGGAGGAGATTGCTGTACAAGGATGACAAACAAATCTGCAGCTTaGATGGACCACCCTGGTGACTTGATGCACGATGCTCCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: GGGDCCTRMTNKSAA*MDHPGDLMHDAPLA
Trigger: AGCGAGAGGAGCATCGTGCATCAAGTCACCAGGGTGGTCCATTCAAGCTGCAGATTTGTTTGTCATCCTTGTACAGCAATCTCCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675689.1
ENST00000676138.1
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGTCTTGCGGCTGCTGTaGCTCTGGCTGCTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEVLRLL*LWLLLH
Trigger: GTGGAGCAGCAGCCAGAGCAACAGCAGCCGCAAGAC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGACCACCCTGGTGACTaGATGCACGATGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLDHPGD*MHDAPF
Trigger: GAAAGGAGCATCGTGCATCAAGTCACCAGGGTGGTC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244769.8
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTGCTGCTGCTCAGCCTaGTGTCCCGGCGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGCCCSA*CPGVWL
Trigger: GAGCCAGACGCCGGGACACAAGGCTGAGCAGCAGCA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCTCGTTGCCGCGGGCTaGCTGGGTTCTATTTTGGTG +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWLVAAG*LGSILV
Trigger: CACCAAAATAGAACCCAGCAAGCCCGCGGCAACGAG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGACCGAAGAAACCGAATaGGGCCATGGAGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLTEETE*GHGVCW
Trigger: CCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp AACGGAAAGTCACATTTGATTTCTGTAGGGGATCCAGGCTCTTCATaGGGAATCATCTCCCCGTGGGTACAATCCGCCAACAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: NGKSHLISVGDPGSS*GIISPWVQSANSSS
Trigger: AGAGCTGCTGTTGGCGGATTGTACCCACGGGGAGATGATTCCTCATGAAGAGCCTGGATCCCCTACAGAAATCAAATGTGACTTTCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp GTTCTTCAGGTTCTTGAGGGTAAGCGAGATGCAGACATCCCCAACTaGGAGTTTGGAACACGGCAAATCAAAGAGCTGGCTGGTTCTCTC +
Preference number: 5 (lower is better)
Translates to: VLQVLEGKRDADIPN*EFGTRQIKELAGSL
Trigger: GAGAGAACCAGCCAGCTCTTTGATTTGCCGTGTTCCAAACTCTCAGTTGGGGATGTCTGCATCTCGCTTACCCTCAAGAACCTGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp AAAGCGGTCGGAAACAGACGTCAGACTATGGGACAGCTAAAACATTaGTTCTCAGGGATGTCGTCCAAGAGGAGGTCTCTGAAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: KAVGNRRQTMGQLKH*FSGMSSKRRSLKLG
Trigger: ACCCAGCTTCAGAGACCTCCTCTTGGACGACATCCCTGAGAATCAATGTTTTAGCTGTCCCATAGTCTGACGTCTGTTTCCGACCGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467008.5
ENST00000492857.1
ENST00000498374.1
ENST00000676138.1
CDS CCA 90 bp GCTCCAGTATGCGTGCATTGGCTTGTTATGTCCCAGACACACACATaGCCTTCCTCATGCTCCATCCATCTCTTCCCACAGAAATGCAAT +
Preference number: 5 (lower is better)
Translates to: APVCVHWLVMSQTHT*PSSCSIHLFPQKCN
Trigger: ATTGCATTTCTGTGGGAAGAGATGGATGGAGCATGAGGAAGGCCATGTGTGTGTCTGGGACATAACAAGCCAATGCACGCATACTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483591.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGAGAGAAACAATGTCTaGCGGCTGCTGTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLERNNV*RLLLLW
Trigger: CCAGAGCAACAGCAGCCGCAAGACATTGTTTCTCTC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCGCAGCAGCACTAAGTTaGAAGCTTCAAAATAGACTC +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLAAAALS*KLQNRL
Trigger: GAGTCTATTTTGAAGCTTCAAACTTAGTGCTGCTGC...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCGTTCAGGACCTCCTaGGCCTGGATGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPFRTS*AWMACC
Trigger: GCAGCAGGCCATCCAGGCCAAGGAGGTCCTGAACGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATAAATGCAGGCCACTTTaGTCGTTGAGGGTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYKCRPL*SLRVEG
Trigger: CCCTTCTACCCTCAACGACAAAAGTGGCCTGCATTT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTTCCTGATGTTGATTTaGCACGTGGGAACCCCAGGA +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYFLMLI*HVGTPG
Trigger: TCCTGGGGTTCCCACGTGCAAAATCAACATCAGGAA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTCACTGAAGGGCAGTTaGCATCTACCTCTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSLKGS*HLPLGS
Trigger: ACTCCCAAGAGGTAGATGCAAACTGCCCTTCAGTGA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTGTGCACCGAGCTTCTaGGTAACTGCTCTGAAGACA +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYCAPSF*VTALKT
Trigger: TGTCTTCAGAGCAGTTACCAAGAAGCTCGGTGCACA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp GGAGGAGGAGATTGCTGTACAAGGATGACAAACAAATCTGCAGCTTaGATGGACCACCCTGGTGACTTGATGCACGATGCTCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: GGGDCCTRMTNKSAA*MDHPGDLMHDAPFH
Trigger: ATGGAAAGGAGCATCGTGCATCAAGTCACCAGGGTGGTCCATTCAAGCTGCAGATTTGTTTGTCATCCTTGTACAGCAATCTCCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000492857.1
ENST00000643828.1
CDS GCA 90 bp AGATCTGTGGCGAGAGACAGGCTAGAACTAGCACAAACAAGTCTGTaGAAGATGAATTTATCCTCCACTGCCTCTACTCCAGGTCATCCC +
Preference number: 5 (lower is better)
Translates to: RSVARDRLELAQTSL*KMNLSSTASTPGHP
Trigger: GGGATGACCTGGAGTAGAGGCAGTGGAGGATAAATTCATCTTGCACAGACTTGTTTGTGCTAGTTCTAGCCTGTCTCTCGCCACAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467008.5
ENST00000498374.1
ENST00000676138.1
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTTGCTCCGCTCTTGGTaGGATTTCATTTTTCGCCGT +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYLLRSW*DFIFRR
Trigger: ACGGCGAAAAATGAAATCCAACCAAGAGCGGAGCAA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGCGGGCGTGTTGCTGTaGGGCAGGACCATCACAGAG +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRAGVLL*GRTITE
Trigger: CTCTGTGATGGTCCTGCCCAACAGCAACACGCCCGC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGCCGATGACAGGGGGTaGAGTCCCTGCGTAGAAGGC +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRADDRG*SPCVEG
Trigger: GCCTTCTACGCAGGGACTCAACCCCCTGTCATCGGC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGCCGTTCTTCAGGTTCTaGAGGGTAAGCGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWPFFRF*RVSEMQ
Trigger: CTGCATCTCGCTTACCCTCAAGAACCTGAAGAACGG...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATGGGCACTCCCCTGGTaGATTCCGTTTTCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEWALPW*IPFSCS
Trigger: CGAGCAGGAAAACGGAATCAACCAGGGGAGTGCCCA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATCTGACTTCTCCAGTTaGCGGCTCTCTGGCGCCGAC +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTSDFSS*RLSGAD
Trigger: GTCGGCGCCAGAGAGCCGCAAACTGGAGAAGTCAGA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCACGCTGCCTCTACTaGCCTACATTAGACCGGCCT +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPRCLY*PTLDRP
Trigger: AGGCCGGTCTAATGTAGGCAAGTAGAGGCAGCGTGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGTCACTGAAGGGCAGTTaGCATCTACCTCTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLSLKGS*HLPLGS
Trigger: ACTCCCAAGAGGTAGATGCAAACTGCCCTTCAGTGA...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp TCTGAAGCTGGGTGTCATCCTTTAGGGTGGCCCAGAATAAAATGGTaGCACATTATGCCTCCTGGCGAGTTCATAAACACTTTGAACGGC +
Preference number: 5 (lower is better)
Translates to: SEAGCHPLGWPRIKW*HIMPPGEFINTLNG
Trigger: GCCGTTCAAAGTGTTTATGAACTCGCCAGGAGGCATAATGTGTCACCATTTTATTCTGGGCCACCCTAAAGGATGACACCCAGCTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467008.5
ENST00000492857.1
ENST00000498374.1
ENST00000676138.1
CDS GCA 90 bp TGGATACAAATGATAAGGGAGAGCCACGTTTCCTTTCCCCCACGCTaGCTCTACTTGCCTACATTAGACCGGCCTTCAATGCAAATCTTA +
Preference number: 5 (lower is better)
Translates to: WIQMIRESHVSFPPR*LYLPTLDRPSMQIL
Trigger: TAAGATTTGCATTGAAGGCCGGTCTAATGTAGGCAAGTAGAGGCAGCGTGGGGGAAAGGAAACGTGGCTCTCCCTTATCATTTGTATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp TCCTTTAGGGTGGCCCAGAATAAAATGGTGACACATTATGCCTCCTaGCGAGTTCATAAACACTTTGAACGGCAAAGACACCAAGTCCCG +
Preference number: 5 (lower is better)
Translates to: SFRVAQNKMVTHYAS*RVHKHFERQRHQVP
Trigger: CGGGACTTGGTGTCTTTGCCGTTCAAAGTGTTTATGAACTCGCCAGGAGGCATAATGTGTCACCATTTTATTCTGGGCCACCCTAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467008.5
ENST00000492857.1
ENST00000498374.1
ENST00000676138.1
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATTCACGAAGATTTTGCTaGAGTAGAAAGGGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSRRFC*SRKGGS
Trigger: ACTGCCACCCTTTCTACTCAAGCAAAATCTTCGTGA...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAACGATGAGTGGCCTGTaGCACCTCCAGGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRTMSGL*HLQVSC
Trigger: GCAGCTGACCTGGAGGTGCAACAGGCCACTCATCGT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAGGCCACTTTTGTCGTaGAGGGTAGAAGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDRPLLS*RVEGEA
Trigger: AGCCTCCCCTTCTACCCTCAACGACAAAAGTGGCCT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCACCAGGGCCTCAGGGTaGAAGTTCTCGCTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGTRASG*KFSLLG
Trigger: TCCCAAGAGCGAGAACTTCAACCCTGAGGCCCTGGT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTCGATCTTCAGGTCGTaGCTTATCTCTGCACTCTGG +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSIFRS*LISALW
Trigger: CCAGAGTGCAGAGATAAGCAACGACCTGAAGATCGA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATAAAGTGGCACCCGAGTaGTCCATAGTCATGAACTAT +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYKVAPE*SIVMNY
Trigger: ATAGTTCATGACTATGGACAACTCGGGTGCCACTTT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGACTGGTCAGACTCTATaGGCACAGAAAGTATTGCAC +
Preference number: 5 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQTGQTL*AQKVLH
Trigger: GTGCAATACTTTCTGTGCCAATAGAGTCTGACCAGT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGAGGGGCCTGCCCACTaGCAGAAAAGACCGTGGAAA +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGEGPAH*QKRPWK
Trigger: TTTCCACGGTCTTTTCTGCAAGTGGGCAGGCCCCTC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CTCCTTTCACATCACCACCGAAGAAACCGAATTGGGCCATGGAGTCTGCTGGCCACATGCAGCATTATATaGCAATCTATGCGGTATCTA +
Preference number: 5 (lower is better)
Translates to: LLSHHHRRNRIGPWSLLATCSII*QSMRYL
Trigger: TAGATACCGCATAGATTGCAATATAATGCTGCATGT...GGCCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGTGGTGATGTGAAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAACCGAAGAAACCGAATaGGGCCATGGAGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTETEETE*GHGVCW
Trigger: CCAGCAGACTCCATGGCCCAATTCGGTTTCTTCGGT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTGTGCACCGAGCTTCTaGGTAACTGCTCTGAAGACA +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWCAPSF*VTALKT
Trigger: TGTCTTCAGAGCAGTTACCAAGAAGCTCGGTGCACA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp GGAGGGCTGAGCACCTTTGCATTATTTCCTAGTGGAAGGGCTCCCTaGAGTCACACTATGTCATCTCTTCCATTACCTGACACTAAAACT +
Preference number: 5 (lower is better)
Translates to: GGLSTFALFPSGRAP*SHTMSSLPLPDTKT
Trigger: AGTTTTAGTGTCAGGTAATGGAAGAGATGACATAGTGTGACTTCAGGGAGCCCTTCCACTAGGAAATAATGCAAAGGTGCTCAGCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473388.6
ENST00000675689.1
CDS GCA 90 bp GTAAAACGCCTAGACCAAAAACCATTTGTGTTTCAAGACCATCCGTaGAGGCTGAAATCCACTCTTTCTCTCTTGTTCCTGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VKRLDQKPFVFQDHP*RLKSTLSLLFLVCS
Trigger: GCTGCAGACCAGGAACAAGAGAGAAAGAGTGGATTTCAGCCTGCACGGATGGTCTTGAAACACAAATGGTTTTTGGTCTAGGCGTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000473388.6
ENST00000483591.6
ENST00000675689.1
CDS GCA 90 bp AGAACTAGCACAAACAAGTCTGTGCAAGATGAATTTATCCTCCACTaGCTCTACTCCAGGTCATCCCAGGACTATGCCTGTGAGCTAATG +
Preference number: 5 (lower is better)
Translates to: RTSTNKSVQDEFILH*LYSRSSQDYACELM
Trigger: CATTAGCTCACAGGCATAGTCCTGGGATGACCTGGAGTAGAGGCAGTGGAGGATAAATTCATCTTGCACAGACTTGTTTGTGCTAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467008.5
ENST00000498374.1
ENST00000676138.1
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATCCACGGGGCTTGTTTaGGATCCCCCTGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTSTGLV*DPPAVK
Trigger: TTTCACTGCAGGGGGATCCAAAACAAGCCCCGTGGA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACCGTTCTTCAGGTTCTaGAGGGTAAGCGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEPFFRF*RVSEMQ
Trigger: CTGCATCTCGCTTACCCTCAAGAACCTGAAGAACGG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATTGCTGGGTTCTATTTaGGTGAGGAAGGGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTELLGSI*VRKGAA
Trigger: TGCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACGTGAAGAGCTTCTGTaGCTCTCACTGAAGGGCAGT +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEREELL*LSLKGS
Trigger: ACTGCCCTTCAGTGAGAGCAACAGAAGCTCTTCACG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGTAGAGGTGTGCAAGTaGTTTGGAGTTTCCCTATGC +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWVEVCK*FGVSLC
Trigger: GCATAGGGAAACTCCAAACAACTTGCACACCTCTAC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAAAGGAGACAGGCTCATaGGCCATCCAGACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEKETGS*AIQTAN
Trigger: GTTTGCTGTCTGGATGGCCAATGAGCCTGTCTCCTT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAAGGAGACAGGCTCATaGGCCATCCAGACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDKETGS*AIQTAN
Trigger: GTTTGCTGTCTGGATGGCCAATGAGCCTGTCTCCTT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCGGTGTCTGTTTTCCCTaGGCCTGTGGGAGGCATATG +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGGVCFP*ACGRHM
Trigger: CATATGCCTCCCACAGGCCAAGGGAAAACAGACACC...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp CCAAGCAAAACTGAACAAAAACCATTTGTGTTTCAAGACCATCCGTaGAGGCTGAAATCCACTCTTTCTCTCTTGTTCCTGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PSKTEQKPFVFQDHP*RLKSTLSLLFLVCS
Trigger: GCTGCAGACCAGGAACAAGAGAGAAAGAGTGGATTTCAGCCTGCACGGATGGTCTTGAAACACAAATGGTTTTTGTTCAGTTTTGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646259.1
CDS GCA 90 bp AGACCTGGGAGAAGATACTTCTCCAACACTGGGCTTGAAGGTGCTTaGTTTTTCACACAAACTGAATTCAGGATTGCCACAACTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RPGRRYFSNTGLEGA*FFTQTEFRIATTSP
Trigger: TGGAGAAGTTGTGGCAATCCTGAATTCAGTTTGTGTGAAAAAGCAAGCACCTTCAAGCCCAGTGTTGGAGAAGTATCTTCTCCCAGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646259.1
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATCCACGGGGCTTGTTTaGGATCCCCCTGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRSTGLV*DPPAVK
Trigger: TTTCACTGCAGGGGGATCCAAAACAAGCCCCGTGGA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTCACGAAGATTTTGCTaGAGTAGAAAGGGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWSRRFC*SRKGGS
Trigger: ACTGCCACCCTTTCTACTCAAGCAAAATCTTCGTGA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAATCGATCTTCAGGTCGTaGCTTATCTCTGCACTCTGG +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTESIFRS*LISALW
Trigger: CCAGAGTGCAGAGATAAGCAACGACCTGAAGATCGA...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGTTTGCATCTACCTCTaGGGAGTGAAGTCAATGCAA +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWVCIYL*GVKSMQ
Trigger: TTGCATTGACTTCACTCCCAAGAGGTAGATGCAAAC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGAGATACAGTACTTGTaGAATGAGAGACCAAGATGC +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLEIQYL*NERPRC
Trigger: GCATCTTGGTCTCTCATTCAACAAGTACTGTATCTC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp ACAGTATTCTCAAATCGCAGAATACCGAGTTCCCCTCCCTCAGACGAGGGCTATAGTGAGATACAGTACTaGTTGAATGAGAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: TVFSNRRIPSSPPSDEGYSEIQY*LNERPR
Trigger: TCTTGGTCTCTCATTCAACAAGTACTGTATCTCACT...ATAGCCCTCGTCTGAGGGAGGGGAACTCGGTATTCTGCGATTTGAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATCTCAGCTCCGGAGTAGAGGTGTGCAAGTTGTTTGGAGTTTCCCTATGCCAGATGATGATGTTCCTATaGCTCCAAACCATGTGTGTT +
Preference number: 5 (lower is better)
Translates to: NLSSGVEVCKLFGVSLCQMMMFL*LQTMCV
Trigger: AACACACATGGTTTGGAGCAATAGGAACATCATCAT...CTGGCATAGGGAAACTCCAAACAACTTGCACACCTCTACTCCGGAGCTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGATACAGTTGAACCATTaGTATGCAAGTCATGGGGAC +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLIQLNH*YASHGD
Trigger: GTCCCCATGACTTGCATACAAATGGTTCAACTGTAT...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAACGAAGGCCTTCAGATaGGCCACAGAAAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTETKAFR*ATEKET
Trigger: TGTCTCCTTTTCTGTGGCCAATCTGAAGGCCTTCGT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATACGAAGGCCTTCAGATaGGCCACAGAAAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDTKAFR*ATEKET
Trigger: TGTCTCCTTTTCTGTGGCCAATCTGAAGGCCTTCGT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp TACTTGCCTACATTAGACCGGCCTTCAATGCAAATCTTAACCTCCTaGGGAATTAGAGAAGGCTTAGGAAGAGTCAAAGGTGGTTCGTCT +
Preference number: 5 (lower is better)
Translates to: YLPTLDRPSMQILTS*GIREGLGRVKGGSS
Trigger: AGACGAACCACCTTTGACTCTTCCTAAGCCTTCTCTAATTCCTCAGGAGGTTAAGATTTGCATTGAAGGCCGGTCTAATGTAGGCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp AAACTGAACAAAAACCATTTGTGTTTCAAGACCATCCGTGCAGGCTaGAATCCACTCTTTCTCTCTTGTTCCTGGTCTGCAGCAGCACTA +
Preference number: 5 (lower is better)
Translates to: KLNKNHLCFKTIRAG*NPLFLSCSWSAAAL
Trigger: TAGTGCTGCTGCAGACCAGGAACAAGAGAGAAAGAGTGGATTTCAGCCTGCACGGATGGTCTTGAAACACAAATGGTTTTTGTTCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646259.1
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGTTTCCATCAGGGAGCTaGGTGCTTGTAGTAGTTTTT +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWFPSGS*VLVVVF
Trigger: AAAAACTACTACAAGCACCAAGCTCCCTGATGGAAA...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244769.8
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATCAGTGGAGGAGGAGATaGCTGTACAAGGATGACAAA +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDQWRRR*LYKDDK
Trigger: TTTGTCATCCTTGTACAGCAATCTCCTCCTCCACTG...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACAGTGGAGGAGGAGATaGCTGTACAAGGATGACAAA +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEQWRRR*LYKDDK
Trigger: TTTGTCATCCTTGTACAGCAATCTCCTCCTCCACTG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAATAGGTTCCACTGTATaGGGAGGACCCAATGAACTG +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEIGSTV*GGPNEL
Trigger: CAGTTCATTGGGTCCTCCCAATACAGTGGAACCTAT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGATTGCTGGGTTCTATTTaGGTGAGGAAGGGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRLLGSI*VRKGAA
Trigger: TGCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAA...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GAACTGATTCTCAGACATCAAAGTGAAAAGTGCCTCCCGTCAGGTAGTACTTGGGAGAGACCAAGATGCTaGGTAATAAAGTGTGAACAG +
Preference number: 5 (lower is better)
Translates to: ELILRHQSEKCLPSGSTWERPRC*VIKCEQ
Trigger: CTGTTCACACTTTATTACCAAGCATCTTGGTCTCTC...CCAAGTACTACCTGACGGGAGGCACTTTTCACTTTGATGTCTGAGAATCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAACATAATGAGTCCTGTTaGATTGGTAGCCTGGATCCC +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEHNESC*IGSLDP
Trigger: GGGATCCAGGCTACCAATCAAACAGGACTCATTATG...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp GCTAATACCCCTTCAACACCTGGCTCGGTTACATCAAGTGATTCATaGATCCTACAAGGCAAGCCACTACACATATTGTTCTTGGTTGTT +
Preference number: 5 (lower is better)
Translates to: ANTPSTPGSVTSSDS*ILQGKPLHILFLVV
Trigger: AACAACCAAGAACAATATGTGTAGTGGCTTGCCTTGTAGGATTCATGAATCACTTGATGTAACCGAGCCAGGTGTTGAAGGGGTATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473388.6
ENST00000675689.1
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCATAGGTTCCACTGTATaGGGAGGACCCAATGAACTG +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGIGSTV*GGPNEL
Trigger: CAGTTCATTGGGTCCTCCCAATACAGTGGAACCTAT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATCCCCAACTGAGAGTTaGGAACACGGCAAATCAAAG +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTSPTES*EHGKSK
Trigger: CTTTGATTTGCCGTGTTCCAAACTCTCAGTTGGGGA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AATGGGTTGACTCCAGGCTACATGGCTCCAGAGTGCGTCTTAGAAATGAATCTGGAAACTTTCAATATCTaGCTCTTCAGCAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: NGLTPGYMAPECVLEMNLETFNI*LFSNSA
Trigger: TGCAGAATTGCTGAAGAGCAAGATATTGAAAGTTTC...CAGATTCATTTCTAAGACGCACTCTGGAGCCATGTAGCCTGGAGTCAACCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAACTGGTCAGACTCTATaGGCACAGAAAGTATTGCAC +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTETGQTL*AQKVLH
Trigger: GTGCAATACTTTCTGTGCCAATAGAGTCTGACCAGT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGTGCGTTCTTCCTATTaGAAGAGAAAGCTGCCACAA +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDVRSSY*KRKLPQ
Trigger: TTGTGGCAGCTTTCTCTTCAAATAGGAAGAACGCAC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAGGTGTGCAAGTTGTTaGGAGTTTCCCTATGCCAGA +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGRCASC*EFPYAR
Trigger: TCTGGCATAGGGAAACTCCAAACAACTTGCACACCT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACACATAATGAGTCCTGTTaGATTGGTAGCCTGGATCCC +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTHNESC*IGSLDP
Trigger: GGGATCCAGGCTACCAATCAAACAGGACTCATTATG...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATTCGGCTGACACTAATTaGGGTTTAGAGTTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDSADTN*GLELSS
Trigger: ACTGCTCAACTCTAAACCCAAATTAGTGTCAGCCGA...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp TATGCTTTCCAAGTTTGGAAGATGCGGAGGCCTCATGCATGTCTGTaGACACATAAGCACCACCACAAAATTTGCTTAACCTATTTCTTT +
Preference number: 5 (lower is better)
Translates to: YAFQVWKMRRPHACL*THKHHHKICLTYFF
Trigger: AAAGAAATAGGTTAAGCAAATTTTGTGGTGGTGCTTATGTGTGCACAGACATGCATGAGGCCTCCGCATCTTCCAAACTTGGAAAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483591.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAACGGAAAGTCACATTaGATTTCTGTAGGGGATCCA +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDNGKSH*ISVGDP
Trigger: TGGATCCCCTACAGAAATCAAATGTGACTTTCCGTT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATTCGTTGCTCCGCTCTaGGTTGGATTTCATTTTTCG +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTFVAPL*VGFHFS
Trigger: CGAAAAATGAAATCCAACCAAGAGCGGAGCAACGAA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCCCTGTGGACAATGCTTaGTGTAAACCTATTCCCTGT +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGPVDNA*CKPIPC
Trigger: ACAGGGAATAGGTTTACACAAAGCATTGTCCACAGG...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAGTGCGTTCTTCCTATTaGAAGAGAAAGCTGCCACAA +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTVRSSY*KRKLPQ
Trigger: TTGTGGCAGCTTTCTCTTCAAATAGGAAGAACGCAC...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATGCCCTGACTAATTTCTaGGTGATTGTGTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDALTNF*VIVFHC
Trigger: ACAATGGAACACAATCACCAAGAAATTAGTCAGGGC...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCTTCACCTGGTGCAAATaGAAGTGCAAAGGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGFTWCK*KCKGFQ
Trigger: CTGAAACCCTTTGCACTTCAATTTGCACCAGGTGAA...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATTTCCACTGTCCGGCTaGATTTTTGGACAGGAATAC +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTFPLSG*IFGQEY
Trigger: GTATTCCTGTCCAAAAATCAAGCCGGACAGTGGAAA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAATACAGTTGAACCATTaGTATGCAAGTCATGGGGAC +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEIQLNH*YASHGD
Trigger: GTCCCCATGACTTGCATACAAATGGTTCAACTGTAT...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACATCGGCTGACACTAATTaGGGTTTAGAGTTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTSADTN*GLELSS
Trigger: ACTGCTCAACTCTAAACCCAAATTAGTGTCAGCCGA...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 90 bp TTTCTCTTAAATATTCAAAAACCATTTGTGTTTCAAGACCATCCGTaGAGGCTGAAATCCACTCTTTCTCTCTTGTTCCTGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FLLNIQKPFVFQDHP*RLKSTLSLLFLVCS
Trigger: GCTGCAGACCAGGAACAAGAGAGAAAGAGTGGATTTCAGCCTGCACGGATGGTCTTGAAACACAAATGGTTTTTGAATATTTAAGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495178.1
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAACGGAAAGTCACATTaGATTTCTGTAGGGGATCCA +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGNGKSH*ISVGDP
Trigger: TGGATCCCCTACAGAAATCAAATGTGACTTTCCGTT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGACCTGTGGACAATGCTTaGTGTAAACCTATTCCCTGT +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRPVDNA*CKPIPC
Trigger: ACAGGGAATAGGTTTACACAAAGCATTGTCCACAGG...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATATGATGATGTTCCTATaGCTCCAAACCATGTGTGTT +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDMMMFL*LQTMCV
Trigger: AACACACATGGTTTGGAGCAATAGGAACATCATCAT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAAACATTCCTTGAAATaGTACAACCCTACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDKHSLK*YNPTPE
Trigger: CTCTGGAGTAGGGTTGTACAATTTCAAGGAATGTTT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAGTAAGGTAACGTATTaGAAGCGAGGTCATCTATGT +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDSKVTY*KRGHLC
Trigger: ACATAGATGACCTCGCTTCAAATACGTTACCTTACT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 90 bp TGGTCTAATTTCTTTGGAAAACTGTACCATGTGCTTTCATCACAATaGAGAACCATAAGCTATCAGTTCCTTGCAGCAGATCTTTTCACG +
Preference number: 5 (lower is better)
Translates to: WSNFFGKLYHVLSSQ*RTISYQFLAADLFT
Trigger: CGTGAAAAGATCTGCTGCAAGGAACTGATAGCTTATGGTTCTCCATTGTGATGAAAGCACATGGTACAGTTTTCCAAAGAAATTAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000473388.6
ENST00000483591.6
ENST00000675689.1
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGCAGCAGCACTAAGTTaGAAGCTTCAAAATAGACTC +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRAAALS*KLQNRL
Trigger: GAGTCTATTTTGAAGCTTCAAACTTAGTGCTGCTGC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TCCTGTTTGATTGGTAGCCTGGATCCCTTGTTACAAACACTTCGTGTTCAAGATAATGGTCTAATTTCTTaGGAAAACTGTACCATGTGC +
Preference number: 5 (lower is better)
Translates to: SCLIGSLDPLLQTLRVQDNGLIS*ENCTMC
Trigger: GCACATGGTACAGTTTTCCAAAGAAATTAGACCATT...ATCTTGAACACGAAGTGTTTGTAACAAGGGATCCAGGCTACCAATCAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAGAGAGACCAAGATGCTaGGTAATAAAGTGTGAACAG +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRERPRC*VIKCEQ
Trigger: CTGTTCACACTTTATTACCAAGCATCTTGGTCTCTC...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp GGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGGCAGTGAGATACAGTACTaGTTGAATGAGAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: GQYVILVRITVNNTSNEGSEIQY*LNERPR
Trigger: TCTTGGTCTCTCATTCAACAAGTACTGTATCTCACT...GCCTTCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp AGTTCAAATGCACTAACTAAAGGATTTACCCCACTCCTGGGCCAGAAAACTGAAGAAACTTTCAATATCTaGCTCTTCAGCAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: SSNALTKGFTPLLGQKTEETFNI*LFSNSA
Trigger: TGCAGAATTGCTGAAGAGCAAGATATTGAAAGTTTC...TTCAGTTTTCTGGCCCAGGAGTGGGGTAAATCCTTTAGTTAGTGCATTTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAAGAAAAGTCAGGTATTaGTTCAGTTTAGTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTRKVRY*FSLVAA
Trigger: GGCTGCAACTAAACTGAACAAATACCTGACTTTTCT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp CAATTCAATACTCGAAGTAAGCCAAAAGGTGGTGTGTGTTTTTCTGAGTCCACAATACCCTTTCTGGGTTaGTACCAAACATTAAATCTC +
Preference number: 5 (lower is better)
Translates to: QFNTRSKPKGGVCFSESTIPFLG*YQTLNL
Trigger: GAGATTTAATGTTTGGTACAAACCCAGAAAGGGTAT...TGTGGACTCAGAAAAACACACACCACCTTTTGGCTTACTTCGAGTATTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAAGAAAAGTCAGGTATTaGTTCAGTTTAGTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRRKVRY*FSLVAA
Trigger: GGCTGCAACTAAACTGAACAAATACCTGACTTTTCT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS-3UTR CAA 90 bp TGGAGGACAGTATGTTATCTTGGTAAGGATTACTGTAAACAACACTTCCAACGAACATGCAGCATTATATaGCAATCTATGCGGTATCTA +
Preference number: 5 (lower is better)
Translates to: WRTVCYLGKDYCKQHFQRTCSII*QSMRYL
Trigger: TAGATACCGCATAGATTGCAATATAATGCTGCATGT...TCGTTGGAAGTGTTGTTTACAGTAATCCTTACCAAGATAACATACTGTCCTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 90 bp AGAAATGTTTCTATTTGTTGTAACACTAGCCACTGTGATGGGGTTTaGCCCGTGTCTTTGTCCATAAAACAACCCTATAAGATATGTAAA +
Preference number: 5 (lower is better)
Translates to: RNVSICCNTSHCDGV*PVSLSIKQPYKICK
Trigger: TTTACATATCTTATAGGGTTGTTTTATGGACAAAGACACGGGTCAAACCCCATCACAGTGGCTAGTGTTACAACAAATAGAAACATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467008.5
ENST00000498374.1
ENST00000676138.1
CDS TCA 90 bp TCTGTATTTAAGTCCTTAATGTACTTGGAAAACCTCAGAGTCTACTaGATCATACAGGCCACGAAGAGCCAAAATATTTCAGGAGTAATA +
Preference number: 5 (lower is better)
Translates to: SVFKSLMYLENLRVY*IIQATKSQNISGVI
Trigger: TATTACTCCTGAAATATTTTGGCTCTTCGTGGCCTGTATGATTCAGTAGACTCTGAGGTTTTCCAAGTACATTAAGGACTTAAATACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467008.5
ENST00000676138.1
CDS TCA 90 bp AAACTTTGCTCTATTTTTAATTATTTGGTTCAGAGGACCCATTTGTaGTTAACTTCTGTGTTGCATGGCAAAGGAAGTAAAGTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: KLCSIFNYLVQRTHL*LTSVLHGKGSKVPD
Trigger: GTCAGGAACTTTACTTCCTTTGCCATGCAACACAGAAGTTAATCACAAATGGGTCCTCTGAACCAAATAATTAAAAATAGAGCAAAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467008.5
ENST00000676138.1
CDS TCA 90 bp TTTTATGAGATACTGATTACTCACAAGAACAAAGGGAAATCCAATTaGAGGATTAAATTCCTGTCAAAACCAGTCACTCATGTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: FYEILITHKNKGKSN*RIKFLSKPVTHVSA
Trigger: TGCAGACACATGAGTGACTGGTTTTGACAGGAATTTAATCCTTCAATTGGATTTCCCTTTGTTCTTGTGAGTAATCAGTATCTCATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676138.1
CDS CCA 72 bp ACGCGGCAGGCAGCGTGGTGGCCACGGGGACAGACCTaGGAGCGCTGGGCGGGGAGTAGTCCAGCCCTGTGG +
Preference number: 6 (lower is better)
Translates to: TRQAAWWPRGQT*ERWAGSSPALW
Trigger: CCACAGGGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCGTGGCCACCACGCTGCCTGCCGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS TCA 72 bp CGACTTGCCGCCTGCCTTGCCCAGGCCCAGGTCGGCTaGGGACGGGGCCCCGTACCGCCGGCTCTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: RLAACLAQAQVG*GRGPVPPALLH
Trigger: ATGGAGAAGAGCCGGCGGTACGGGGCCCCGTCCTCAGCCGACCTGGGCCTGGGCAAGGCAGGCGGCAAGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp TGTAAACCAAGCTCCACCGAGGTCCCTGCCGGCCCATaGCTCCCGCCCCCGTGGCCCCGGCCACCAGGGTTG +
Preference number: 6 (lower is better)
Translates to: CKPSSTEVPAGP*LPPPWPRPPGL
Trigger: CAACCCTGGTGGCCGGGGCCACGGGGGCGGGAGGCATGGGCCGGCAGGGACCTCGGTGGAGCTTGGTTTACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS CAA 90 bp CCACCAGGGTTGCCCGGGAGCCATGCTGTGCCCTCCACCCGGTGGTaGTCGCTGGGCAGGGTAGGGGCCTTCTCCTCGGAGGACCGGCTG +
Preference number: 6 (lower is better)
Translates to: PPGLPGSHAVPSTRW*SLGRVGAFSSEDRL
Trigger: CAGCCGGTCCTCCGAGGAGAAGGCCCCTACCCTGCCCAGCGACAACCACCGGGTGGAGGGCACAGCATGGCTCCCGGGCAACCCTGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS GCA 72 bp CCCGGGGTGATGAGCCCCGGAGCCCTGCTGAGGTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PGVMSPGALLRC*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTCAGCAGGGCTCCGGGGCTCATCACCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp ACTCGTACGGGTGAGGAACCGACTTGCCGCCTGCCTTaGCCAGGCCCAGGTCGGCTGAGGACGGGGCCCCGT +
Preference number: 6 (lower is better)
Translates to: TRTGEEPTCRLP*PGPGRLRTGPR
Trigger: ACGGGGCCCCGTCCTCAGCCGACCTGGGCCTGGGCAAGGCAGGCGGCAAGTCGGTTCCTCACCCGTACGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 90 bp CCTGCTCGGCATACCTGTGTCTGCTGCCCGCCAGGCCGTCGGCCTTaGAGTGCTTCAGCAGGACGCTGGCGGGATCCACGGGCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: PARHTCVCCPPGRRP*SASAGRWRDPRAGP
Trigger: AGGGCCAGCCCGTGGATCCCGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGACGGCCTGGCGGGCAGCAGACACAGGTATGCCGAGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 72 bp CTCGGGTGGACCACCACGTGCCTGGACTCGTACGGGTaGGGAACCGACTTGCCGCCTGCCTTGCCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: LGWTTTCLDSYG*GTDLPPALPRP
Trigger: GGGCCTGGGCAAGGCAGGCGGCAAGTCGGTTCCTCACCCGTACGAGTCCAGGCACGTGGTGGTCCACCCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp GGGGTGATGAGCCCCGGAGCCCTGCTGAGGTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GVMSPGALLRCC*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTCAGCAGGGCTCCGGGGCTCATCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp CCACGTGCCTGGACTCGTACGGGTGAGGAACCGACTTaGCGCCTGCCTTGCCCAGGCCCAGGTCGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: PRAWTRTGEEPT*RLPCPGPGRLR
Trigger: CCTCAGCCGACCTGGGCCTGGGCAAGGCAGGCGGCAAGTCGGTTCCTCACCCGTACGAGTCCAGGCACGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 72 bp TTGCCCGGGAGCCATGCTGTGCCCTCCACCCGGTGGTaGTCGCTGGGCAGGGTAGGGGCCTTCTCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: LPGSHAVPSTRW*SLGRVGAFSSE
Trigger: CTCCGAGGAGAAGGCCCCTACCCTGCCCAGCGACAACCACCGGGTGGAGGGCACAGCATGGCTCCCGGGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS GCA 72 bp GCCGCTCAGGTAGCCGATGACAGGGGGTTGAGTCCCTaGGTAGAAGGCCGTGGCTGGCAGTCCCACCGGGAG +
Preference number: 6 (lower is better)
Translates to: AAQVADDRGLSP*VEGRGWQSHRE
Trigger: CTCCCGGTGGGACTGCCAGCCACGGCCTTCTACGCAGGGACTCAACCCCCTGTCATCGGCTACCTGAGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp GCAGCGTGGTGGCCACGGGGACAGACCTGGGAGCGCTaGGCGGGGAGTAGTCCAGCCCTGTGGACAATGCTT +
Preference number: 6 (lower is better)
Translates to: AAWWPRGQTWER*AGSSPALWTML
Trigger: AAGCATTGTCCACAGGGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCGTGGCCACCACGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS CCA 72 bp CAGAGTGGAATAGGCCTCCAGCTGGGAGCGCTGGGATaGAGTGGTGGCCCCTGCGGCCGAGGCCACTGCACT +
Preference number: 6 (lower is better)
Translates to: QSGIGLQLGALG*SGGPCGRGHCT
Trigger: AGTGCAGTGGCCTCGGCCGCAGGGGCCACCACTCCATCCCAGCGCTCCCAGCTGGAGGCCTATTCCACTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS CCA 72 bp AGGGTGAGCGTGTGTGGGATCATCGTCTGGTGGGGGTaGAGGTGGACGGGGATGGCCGGAGGAGAGGCGGTG +
Preference number: 6 (lower is better)
Translates to: RVSVCGIIVWWG*RWTGMAGGEAV
Trigger: CACCGCCTCTCCTCCGGCCATCCCCGTCCACCTCCACCCCCACCAGACGATGATCCCACACACGCTCACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp CACCACAGGCAGGTGGATCTGGGCCTGCACCATGGCTaGGTAGGCGGCCTGGGTGACCAGGGCCTCAGGGTT +
Preference number: 6 (lower is better)
Translates to: HHRQVDLGLHHG*VGGLGDQGLRV
Trigger: AACCCTGAGGCCCTGGTCACCCAGGCCGCCTACCCAGCCATGGTGCAGGCCCAGATCCACCTGCCTGTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 72 bp CAGGTGCTGGGGCAGGCTGCCGGCGTAGGTGATTGCTaGCTGCTGGCCGCTCAGGTAGCCGATGACAGGGGG +
Preference number: 6 (lower is better)
Translates to: QVLGQAAGVGDC*LLAAQVADDRG
Trigger: CCCCCTGTCATCGGCTACCTGAGCGGCCAGCAGCAAGCAATCACCTACGCCGGCAGCCTGCCCCAGCACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 72 bp TGGGAGGACCCAATGAACTGGAAGGTGTGCGGCAGGTaGGCGTACTGCACGGGGGACACCGGGGTCCCTGGC +
Preference number: 6 (lower is better)
Translates to: WEDPMNWKVCGR*AYCTGDTGVPG
Trigger: GCCAGGGACCCCGGTGTCCCCCGTGCAGTACGCTCACCTGCCGCACACCTTCCAGTTCATTGGGTCCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS TCA 72 bp ATACCTGTGTCTGCTGCCCGCCAGGCCGTCGGCCTTTaGGTGCTTCAGCAGGACGCTGGCGGGATCCACGGG +
Preference number: 6 (lower is better)
Translates to: IPVSAARQAVGL*VLQQDAGGIHG
Trigger: CCCGTGGATCCCGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGACGGCCTGGCGGGCAGCAGACACAGGTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp TGGCCTGTTGCACCTCCAGGTCAGCTGCGGGCGTGTTaGTGTTGGGCAGGACCATCACAGAGGCCCGGACCC +
Preference number: 6 (lower is better)
Translates to: WPVAPPGQLRAC*CWAGPSQRPGP
Trigger: GGGTCCGGGCCTCTGTGATGGTCCTGCCCAACAGCAACACGCCCGCAGCTGACCTGGAGGTGCAACAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp CGGAGGACCGGCTGGTGGCGGGGATCTCGCGCTTCTTaGGAGGCAGGCATTCGTTGCTCCGCTCTTGGTTGG +
Preference number: 6 (lower is better)
Translates to: RRTGWWRGSRAS*EAGIRCSALGW
Trigger: CCAACCAAGAGCGGAGCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGTCCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 90 bp GGTGATTGCTTGCTGCTGGCCGCTCAGGTAGCCGATGACAGGGGGTaGAGTCCCTGCGTAGAAGGCCGTGGCTGGCAGTCCCACCGGGAG +
Preference number: 6 (lower is better)
Translates to: GDCLLLAAQVADDRG*SPCVEGRGWQSHRE
Trigger: CTCCCGGTGGGACTGCCAGCCACGGCCTTCTACGCAGGGACTCAACCCCCTGTCATCGGCTACCTGAGCGGCCAGCAGCAAGCAATCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTCAGCCTTGTGTCCCGGCGTCTGGCTCAGACTG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*SALCPGVWLRL
Trigger: CAGTCTGAGCCAGACGCCGGGACACAAGGCTGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp TGTAGTCTGAGGGGCTCGGGTGGACCACCACGTGCCTaGACTCGTACGGGTGAGGAACCGACTTGCCGCCTG +
Preference number: 6 (lower is better)
Translates to: CSLRGSGGPPRA*TRTGEEPTCRL
Trigger: CAGGCGGCAAGTCGGTTCCTCACCCGTACGAGTCCAGGCACGTGGTGGTCCACCCGAGCCCCTCAGACTACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 72 bp TCGGAGGACCGGCTGGTGGCGGGGATCTCGCGCTTCTaGGGAGGCAGGCATTCGTTGCTCCGCTCTTGGTTG +
Preference number: 6 (lower is better)
Translates to: SEDRLVAGISRF*GGRHSLLRSWL
Trigger: CAACCAAGAGCGGAGCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGTCCTCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 72 bp TGTTGCACCTCCAGGTCAGCTGCGGGCGTGTTGCTGTaGGGCAGGACCATCACAGAGGCCCGGACCCCCGAA +
Preference number: 6 (lower is better)
Translates to: CCTSRSAAGVLL*GRTITEARTPE
Trigger: TTCGGGGGTCCGGGCCTCTGTGATGGTCCTGCCCAACAGCAACACGCCCGCAGCTGACCTGGAGGTGCAACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 72 bp TTGCTGCTGGCCGCTCAGGTAGCCGATGACAGGGGGTaGAGTCCCTGCGTAGAAGGCCGTGGCTGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: LLLAAQVADDRG*SPCVEGRGWQS
Trigger: GGACTGCCAGCCACGGCCTTCTACGCAGGGACTCAACCCCCTGTCATCGGCTACCTGAGCGGCCAGCAGCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCAGCCTaGTGTCCCGGCGTCTGGCTCAGACTGCCCATGTTGGCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCCCSA*CPGVWLRLPMLASR
Trigger: TCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGCCGGGACACAAGGCTGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 90 bp CGGCTCTCTGGCGCCGACCACCTCCTCTTCCTCGTTGCCGCGGGCTaGCTGGGTTCTATTTTGGTGAGGAAGGGCGCTGCAGGCAATCCC +
Preference number: 6 (lower is better)
Translates to: RLSGADHLLFLVAAG*LGSILVRKGAAGNP
Trigger: GGGATTGCCTGCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAAGCCCGCGGCAACGAGGAAGAGGAGGTGGTCGGCGCCAGAGAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 72 bp GAAGGCCGTGGCTGGCAGTCCCACCGGGAGTGGCTCTaGAGCACTGTGTGTGGTCTGAATGACCGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: EGRGWQSHREWL*STVCGLNDRVG
Trigger: CCCCACACGGTCATTCAGACCACACACAGTGCTTCAGAGCCACTCCCGGTGGGACTGCCAGCCACGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp GGGATGGCCGGAGGAGAGGCGGTGCGGCCGGTGTTCTaGGGAGAACTGGAAATGTGGACGTACTGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: GMAGGEAVRPVF*GELEMWTYWFC
Trigger: GCAGAACCAGTACGTCCACATTTCCAGTTCTCCGCAGAACACCGGCCGCACCGCCTCTCCTCCGGCCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp TCACCGTTCAGGACCTCCTTGGCCTGGATGGCCTGCTaGAGCCGGCTGCTCTCAGCTTTCTTGGTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SPFRTSLAWMAC*SRLLSAFLVAS
Trigger: GGAGGCCACCAAGAAAGCTGAGAGCAGCCGGCTGCAGCAGGCCATCCAGGCCAAGGAGGTCCTGAACGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp GCGTCTGGCTCAGACTGCCCATGTTGGCCAGCAGAGTaGAATAGGCCTCCAGCTGGGAGCGCTGGGATGGAG +
Preference number: 6 (lower is better)
Translates to: ASGSDCPCWPAE*NRPPAGSAGME
Trigger: CTCCATCCCAGCGCTCCCAGCTGGAGGCCTATTCCACTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS CAA 72 bp GGCGCCGACCACCTCCTCTTCCTCGTTGCCGCGGGCTaGCTGGGTTCTATTTTGGTGAGGAAGGGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: GADHLLFLVAAG*LGSILVRKGAA
Trigger: TGCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAAGCCCGCGGCAACGAGGAAGAGGAGGTGGTCGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp GCTGCTCAGCCTTGTGTCCCGGCGTCTGGCTCAGACTaGCCATGTTGGCCAGCAGAGTGGAATAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: AAQPCVPASGSD*PCWPAEWNRPP
Trigger: TGGAGGCCTATTCCACTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGCCGGGACACAAGGCTGAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp TGCTGCTGCTGCTGCTCAGCCTTGTGTCCCGGCGTCTaGCTCAGACTGCCCATGTTGGCCAGCAGAGTGGAA +
Preference number: 6 (lower is better)
Translates to: CCCCCSALCPGV*LRLPMLASRVE
Trigger: TTCCACTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGCCGGGACACAAGGCTGAGCAGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp GAGGAGAGGCGGTGCGGCCGGTGTTCTGCGGAGAACTaGAAATGTGGACGTACTGGTTCTGCTGGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: EERRCGRCSAEN*KCGRTGSAGLV
Trigger: CACCAGCCCAGCAGAACCAGTACGTCCACATTTCCAGTTCTCCGCAGAACACCGGCCGCACCGCCTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp CCGACGGCGAACTGTATCACGGCCACGCCCGGGCTATaGCTGTCTTCAATCCTCTCTACGGTGCTGGAGTCG +
Preference number: 6 (lower is better)
Translates to: PTANCITATPGL*LSSILSTVLES
Trigger: CGACTCCAGCACCGTAGAGAGGATTGAAGACAGCCATAGCCCGGGCGTGGCCGTGATACAGTTCGCCGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 90 bp GCCTTCTCCTCGGAGGACCGGCTGGTGGCGGGGATCTCGCGCTTCTaGGGAGGCAGGCATTCGTTGCTCCGCTCTTGGTTGGATTTCATT +
Preference number: 6 (lower is better)
Translates to: AFSSEDRLVAGISRF*GGRHSLLRSWLDFI
Trigger: AATGAAATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGTCCTCCGAGGAGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp CTCTCAGCTTTCTTGGTGGCCTCCCGAGGGACAAAGTaGCTGCCGGAGTCGGCGTATTGCATGACGACCTGG +
Preference number: 6 (lower is better)
Translates to: LSAFLVASRGTK*LPESAYCMTTW
Trigger: CCAGGTCGTCATGCAATACGCCGACTCCGGCAGCCACTTTGTCCCTCGGGAGGCCACCAAGAAAGCTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 72 bp GAGGGTAGAAGGGGAGGCTTCACGATGAGTGGCCTGTaGCACCTCCAGGTCAGCTGCGGGCGTGTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: EGRRGGFTMSGL*HLQVSCGRVAV
Trigger: AACAGCAACACGCCCGCAGCTGACCTGGAGGTGCAACAGGCCACTCATCGTGAAGCCTCCCCTTCTACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 90 bp TTTGTCGTTGAGGGTAGAAGGGGAGGCTTCACGATGAGTGGCCTGTaGCACCTCCAGGTCAGCTGCGGGCGTGTTGCTGTTGGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: FVVEGRRGGFTMSGL*HLQVSCGRVAVGQD
Trigger: GTCCTGCCCAACAGCAACACGCCCGCAGCTGACCTGGAGGTGCAACAGGCCACTCATCGTGAAGCCTCCCCTTCTACCCTCAACGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 72 bp CTTTTGTCGTTGAGGGTAGAAGGGGAGGCTTCACGATaGGTGGCCTGTTGCACCTCCAGGTCAGCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: LLSLRVEGEASR*VACCTSRSAAG
Trigger: GCCCGCAGCTGACCTGGAGGTGCAACAGGCCACTCATCGTGAAGCCTCCCCTTCTACCCTCAACGACAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 72 bp ACAAATCTGCAGCTTGAATGGACCACCCTGGTGACTTaGTGCACGATGCTCCTCTCGCTCCGCCCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: TNLQLEWTTLVT*CTMLLSLRPSG
Trigger: GCCGGACGGGCGGAGCGAGAGGAGCATCGTGCATCAAGTCACCAGGGTGGTCCATTCAAGCTGCAGATTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675689.1
ENST00000676138.1
CDS CAA 72 bp TGCTGTTGCTCTGGCTGCTGCTCCACGGGGCTTGTTTaGGATCCCCCTGCAGTGAAACAGGTCCTGTACGGC +
Preference number: 6 (lower is better)
Translates to: CCCSGCCSTGLV*DPPAVKQVLYG
Trigger: GCCGTACAGGACCTGTTTCACTGCAGGGGGATCCAAAACAAGCCCCGTGGAGCAGCAGCCAGAGCAACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000467008.5
ENST00000473388.6
ENST00000479680.1
ENST00000483954.1
ENST00000492857.1
ENST00000498374.1
CDS CAA 90 bp GGCTTAGGAAGAGTCAAAGGTGGTTCGTCTTCTGACTTCTCCAGTTaGCGGCTCTCTGGCGCCGACCACCTCCTCTTCCTCGTTGCCGCG +
Preference number: 6 (lower is better)
Translates to: GLGRVKGGSSSDFSS*RLSGADHLLFLVAA
Trigger: CGCGGCAACGAGGAAGAGGAGGTGGTCGGCGCCAGAGAGCCGCAAACTGGAGAAGTCAGAAGACGAACCACCTTTGACTCTTCCTAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CCA 72 bp GAGTGCTTCAGCAGGACGCTGGCGGGATCCACGGGCTaGCCCTTTTTAACAGAGCCGTTCTTCAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: ECFSRTLAGSTG*PFLTEPFFRFL
Trigger: CAAGAACCTGAAGAACGGCTCTGTTAAAAAGGGCCAGCCCGTGGATCCCGCCAGCGTCCTGCTGAAGCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 72 bp GGGCAGAGGGAGAGAAACAATGTCTTGCGGCTGCTGTaGCTCTGGCTGCTGCTCCACGGGGCTTGTTTTGGA +
Preference number: 6 (lower is better)
Translates to: GQRERNNVLRLL*LWLLLHGACFG
Trigger: TCCAAAACAAGCCCCGTGGAGCAGCAGCCAGAGCAACAGCAGCCGCAAGACATTGTTTCTCTCCCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000467008.5
ENST00000473388.6
ENST00000479680.1
ENST00000483954.1
ENST00000492857.1
ENST00000498374.1
CDS CAA 90 bp GACCACCTCCTCTTCCTCGTTGCCGCGGGCTTGCTGGGTTCTATTTaGGTGAGGAAGGGCGCTGCAGGCAATCCCATTTTCTCTGGAAAC +
Preference number: 6 (lower is better)
Translates to: DHLLFLVAAGLLGSI*VRKGAAGNPIFSGN
Trigger: GTTTCCAGAGAAAATGGGATTGCCTGCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAAGCCCGCGGCAACGAGGAAGAGGAGGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 72 bp TCCTCGTTGCCGCGGGCTTGCTGGGTTCTATTTTGGTaGGGAAGGGCGCTGCAGGCAATCCCATTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: SSLPRACWVLFW*GRALQAIPFSL
Trigger: CAGAGAAAATGGGATTGCCTGCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAAGCCCGCGGCAACGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS GCA 72 bp GGCAGAGGGAGAGAAACAATGTCTTGCGGCTGCTGTTaGTCTGGCTGCTGCTCCACGGGGCTTGTTTTGGAT +
Preference number: 6 (lower is better)
Translates to: GRGRETMSCGCC*SGCCSTGLVLD
Trigger: ATCCAAAACAAGCCCCGTGGAGCAGCAGCCAGAGCAACAGCAGCCGCAAGACATTGTTTCTCTCCCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000467008.5
ENST00000473388.6
ENST00000479680.1
ENST00000483954.1
ENST00000492857.1
ENST00000498374.1
CDS GCA 72 bp CGGGGATCTCGCGCTTCTTGGGAGGCAGGCATTCGTTaGTCCGCTCTTGGTTGGATTTCATTTTTCGCCGTC +
Preference number: 6 (lower is better)
Translates to: RGSRASWEAGIR*SALGWISFFAV
Trigger: GACGGCGAAAAATGAAATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS CAA 72 bp CTCTTCCTCGTTGCCGCGGGCTTGCTGGGTTCTATTTaGGTGAGGAAGGGCGCTGCAGGCAATCCCATTTTC +
Preference number: 6 (lower is better)
Translates to: LFLVAAGLLGSI*VRKGAAGNPIF
Trigger: GAAAATGGGATTGCCTGCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAAGCCCGCGGCAACGAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244769.8
ENST00000436367.6
CDS TCA 72 bp AGCTGGCATAGGTTCCACTGTATTGGGAGGACCCAATaGACTGGAAGGTGTGCGGCAGGTGAGCGTACTGCA +
Preference number: 6 (lower is better)
Translates to: SWHRFHCIGRTQ*TGRCAAGERTA
Trigger: TGCAGTACGCTCACCTGCCGCACACCTTCCAGTTCATTGGGTCCTCCCAATACAGTGGAACCTATGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
ENST00000642969.1
CDS TCA 72 bp CATGTTGGCCAGGATGGTCTTGCTCTCCTGACTTTGTaGTCCGTTCGCCTCGGTCTCCCAAAGTGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: HVGQDGLALLTL*SVRLGLPKCWH
Trigger: ATGCCAGCACTTTGGGAGACCGAGGCGAACGGATCACAAAGTCAGGAGAGCAAGACCATCCTGGCCAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643828.1
CDS CCA 72 bp ACCTGGGAGCGCTGGGCGGGGAGTAGTCCAGCCCTGTaGACAATGCTTTGTGTAAACCTATTCCCTGTTGTA +
Preference number: 6 (lower is better)
Translates to: TWERWAGSSPAL*TMLCVNLFPVV
Trigger: TACAACAGGGAATAGGTTTACACAAAGCATTGTCCACAGGGCTGGACTACTCCCCGCCCAGCGCTCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244769.8
ENST00000436367.6
EN