RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATRIP (Homo sapiens)

Ensembl gene IDs: ENSG00000164053

Ensembl transcript IDs: ENST00000320211.10, ENST00000346691.9, ENST00000412052.4, ENST00000634384.2, ENST00000635082.1, ENST00000635084.1, ENST00000635464.1, ENST00000639561.1

Found 851 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGCACACTCTCCCGCGGCTCTCGCTGGCAGCAGTGGCGGGAAGTaGAACTTGGCGTGGGCCCGCCTACAGGCCCACGTGAGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: AAHSPAALAGSSGGK*NLAWARLQAHVSQA
Trigger: GGCCTGGCTCACGTGGGCCTGTAGGCGGGCCCACGCCAAGTTTCACTTCCCGCCACTGCTGCCAGCGAGAGCCGCGGGAGAGTGTGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp TGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTaGTGGTCGGTCCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGC +
Preference number: 1 (lower is better)
Translates to: CSSSTVSRRQRTVRL*WSVLGGPPALRTVS
Trigger: GCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 90 bp AGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTGCTaGTCGGTCCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCAC +
Preference number: 1 (lower is better)
Translates to: SSSTVSRRQRTVRLC*SVLGGPPALRTVSH
Trigger: GTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 90 bp CGTGTCCCGCAGACAGCGCACTGTCCGCCTCTGCTGGTCGGTCCTTaGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGTCTGTGCAA +
Preference number: 1 (lower is better)
Translates to: RVPQTAHCPPLLVGP*GSPCPPHCQPLSVQ
Trigger: TTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR TCA 90 bp CGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTGCTaGGCCTGGAGAGGAGCATGGGGTGGGTGTGTGAGTGCCCAGTGT +
Preference number: 1 (lower is better)
Translates to: RGQGLRAHGWVRTCC*AWRGAWGGCVSAQC
Trigger: ACACTGGGCACTCACACACCCACCCCATGCTCCTCTCCAGGCTCAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR CCA 90 bp GACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTaGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGGTCCCA +
Preference number: 1 (lower is better)
Translates to: DQGSGARPAPGLTHC*EPLLRPFHAHLWVP
Trigger: TGGGACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp GTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTaGTGCGGCCCTTTCATGCCCACCTGTGGGTCCCAGTTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: VVPDQLPVLHTAGSP*CGPFMPTCGSQFPR
Trigger: CCTGGGAAACTGGGACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp AAGGACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTaGTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGGTC +
Preference number: 1 (lower is better)
Translates to: KDQGSGARPAPGLTH*WEPLLRPFHAHLWV
Trigger: GACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp ACAGCGCACTGTCCGCCTCTGCTGGTCGGTCCTTGGGGGTCCCCCTaGCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAG +
Preference number: 1 (lower is better)
Translates to: TAHCPPLLVGPWGSP*PPHCQPLSVQHHRE
Trigger: CTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 90 bp GCCGAAAGGCCTGGCGTGAGCATCCACCCACCGCAGCAGGGCCTGTaGTCTCCACTGACAGATGCTGAGCAGGGCCAGGACATCACCCTC +
Preference number: 1 (lower is better)
Translates to: AERPGVSIHPPQQGL*SPLTDAEQGQDITL
Trigger: GAGGGTGATGTCCTGGCCCTGCTCAGCATCTGTCAGTGGAGACCACAGGCCCTGCTGCGGTGGGTGGATGCTCACGCCAGGCCTTTCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR TCA 90 bp GGCTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTaGCCTTGGGCTGGGAGAAGGGCAAGCCAGTGGCCTCCATGTCGA +
Preference number: 1 (lower is better)
Translates to: GSPGHICGQPAGTAP*PWAGRRASQWPPCR
Trigger: TCGACATGGAGGCCACTGGCTTGCCCTTCTCCCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR TCA 90 bp CATCCACCCACCGCAGCAGGGCCTGTGGTCTCCACTGACAGATGCTaGGCAGGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAG +
Preference number: 1 (lower is better)
Translates to: HPPTAAGPVVSTDRC*AGPGHHPQPCASLE
Trigger: CTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCCTGCTCAGCATCTGTCAGTGGAGACCACAGGCCCTGCTGCGGTGGGTGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp ATGCGCTGCCAGCACAGCTGTGCTCAGACCTGTGATCTCGCTGGCTaGAGGGCTGCAGGCCTTCCCCGGAGCCACACACAGGGAGAGCTT +
Preference number: 1 (lower is better)
Translates to: MRCQHSCAQTCDLAG*RAAGLPRSHTQGEL
Trigger: AAGCTCTCCCTGTGTGTGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCGAGATCACAGGTCTGAGCACAGCTGTGCTGGCAGCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATaGCCAGCAGACCCAGTGGGGCCAGCAGCCCCTCCCTGGATAGGG +
Preference number: 1 (lower is better)
Translates to: WPGIVHTVWLLPRSG*PADPVGPAAPPWIG
Trigger: CCCTATCCAGGGAGGGGCTGCTGGCCCCACTGGGTCTGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp GTCCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGTCTGTaGAACATCACCGTGAGCGCTCTGACCACCTCCACATTACACTGG +
Preference number: 1 (lower is better)
Translates to: VLGGPPALRTVSHCL*NITVSALTTSTLHW
Trigger: CCAGTGTAATGTGGAGGTGGTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR GCA 90 bp TCCACGCAGTGCATCATGAAGAGCTTGTCCTTCTGCGATAGGCCGTaGAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGCCTC +
Preference number: 1 (lower is better)
Translates to: STQCIMKSLSFCDRP*SSSTVSRRQRTVRL
Trigger: GAGGCGGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCACTGCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 90 bp CTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGCAGCTaGAAGGACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACA +
Preference number: 1 (lower is better)
Translates to: LVAQCTGAIIPVTGS*KDQGSGARPAPGLT
Trigger: TGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGTCCTTCCAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp CAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATaGACCGGGGCCATCATACCAGTGACAGGCAGCTGGAAGGACCAG +
Preference number: 1 (lower is better)
Translates to: QRPSKIHSCGLLVAQ*TGAIIPVTGSWKDQ
Trigger: CTGGTCCTTCCAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp GAAGGCACCATCCAGAGCACTGGTGAGGCCCAGCATAGCCAGCTCTaGTTGGAGCAGGGGGAAGTCGTAGCGGTCACCATTGTGTGCCAC +
Preference number: 1 (lower is better)
Translates to: EGTIQSTGEAQHSQL*LEQGEVVAVTIVCH
Trigger: GTGGCACACAATGGTGACCGCTACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGTGCTCTGGATGGTGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp CCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGTGTAGATaGTGCCTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGC +
Preference number: 1 (lower is better)
Translates to: PCASLEGTAHTGECR*CLGYSSSLGRVLRG
Trigger: GCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAGGCAGCATCTACACTCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 90 bp GGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAGCACTTGGAACACACACTGGAACCC +
Preference number: 1 (lower is better)
Translates to: GEELNSQQHARQGCL*AEALWQHLEHTLEP
Trigger: GGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR TCA 90 bp AGGGTTGGTCTCTACCCCAGAGCTCACGCAGGAGGAATGTGTCGGTaGGTCCCCAGGTGCTCCGCTTCTCTTAGCAGCTGCCAAGTCCTG +
Preference number: 1 (lower is better)
Translates to: RVGLYPRAHAGGMCR*VPRCSASLSSCQVL
Trigger: CAGGACTTGGCAGCTGCTAAGAGAAGCGGAGCACCTGGGGACTCACCGACACATTCCTCCTGCGTGAGCTCTGGGGTAGAGACCAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR GCA 90 bp TGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGTGTAGATGCTaGCTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGC +
Preference number: 1 (lower is better)
Translates to: CASLEGTAHTGECRC*LGYSSSLGRVLRGC
Trigger: GCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAGGCAGCATCTACACTCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp GGTGAGTCCCCAGGTGCTCCGCTTCTCTTAGCAGCTGCCAAGTCCTaGAGGGCCTGGCAGTGTAAGCCGATGAAGAACTGTACAAGGGGG +
Preference number: 1 (lower is better)
Translates to: GESPGAPLLLAAAKS*RAWQCKPMKNCTRG
Trigger: CCCCCTTGTACAGTTCTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTTGGCAGCTGCTAAGAGAAGCGGAGCACCTGGGGACTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CCA 90 bp TGGTTGGGTACGTACCTGCTGCTGAGCCTGGAGAGGAGCATGGGGTaGGTGTGTGAGTGCCCAGTGTTAAGATCCGAAGGGGAGGGAGTG +
Preference number: 1 (lower is better)
Translates to: WLGTYLLLSLERSMG*VCECPVLRSEGEGV
Trigger: CACTCCCTCCCCTTCGGATCTTAACACTGGGCACTCACACACCCACCCCATGCTCCTCTCCAGGCTCAGCAGCAGGTACGTACCCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR CCA 90 bp GCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTaGGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGG +
Preference number: 1 (lower is better)
Translates to: AHLWTASRHSSVTLG*EKGKPVASMSKKMR
Trigger: CCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCCCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 90 bp GGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAGCACTTGGAACACACACTGGAACCT +
Preference number: 1 (lower is better)
Translates to: GEELNSQQHARQGCL*AEALWQHLEHTLEP
Trigger: AGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CCA 90 bp GTTGATGTGGTAAGGAAAGGAGTGGTGCTGGTGCCACCATGTGGCTaGACACTCAGGGCCTCAGCCACACTCCACCTCGGGGTCTTCCAC +
Preference number: 1 (lower is better)
Translates to: VDVVRKGVVLVPPCG*TLRASATLHLGVFH
Trigger: GTGGAAGACCCCGAGGTGGAGTGTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCCTTTCCTTACCACATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR TCA 90 bp GAGTGGGAAGGCCCTTCTGCCTCCCTCTGCTGGGTCTCCATCACGTaGGCACTCATTCCGGGCAACCAGATTCAGTCCAGTGAATGCCAG +
Preference number: 1 (lower is better)
Translates to: EWEGPSASLCWVSIT*ALIPGNQIQSSECQ
Trigger: CTGGCATTCACTGGACTGAATCTGGTTGCCCGGAATGAGTGCTCACGTGATGGAGACCCAGCAGAGGGAGGCAGAAGGGCCTTCCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR GCA 90 bp GAGCAGGTTGGCCAGGTTGTCATCAAAACATTGACGCCCATGCGCTaGCAGCACAGCTGTGCTCAGACCTGTGATCTCGCTGGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: EQVGQVVIKTLTPMR*QHSCAQTCDLAGCR
Trigger: CCTGCAGCCAGCGAGATCACAGGTCTGAGCACAGCTGTGCTGGCAGCGCATGGGCGTCAATGTTTTGATGACAACCTGGCCAACCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 90 bp ACATTACACTGGCAGTTGGAGCCAGTGACTGGGGGCAAGGGGCTCTaGACACCAAGCTTAGCCAGGAGCCACACCACCTCTTGTTCCAGC +
Preference number: 1 (lower is better)
Translates to: TLHWQLEPVTGGKGL*TPSLARSHTTSCSS
Trigger: GCTGGAACAAGAGGTGGTGTGGCTCCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGCCAGTGTAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 90 bp ATGAAGAACTGTACAAGGGGGAGGAAATGCACGGCTCCAGGAAGCTaGCAGAGTGGGAAGGCCCTTCTGCCTCCCTCTGCTGGGTCTCCA +
Preference number: 1 (lower is better)
Translates to: MKNCTRGRKCTAPGS*QSGKALLPPSAGSP
Trigger: TGGAGACCCAGCAGAGGGAGGCAGAAGGGCCTTCCCACTCTGCCAGCTTCCTGGAGCCGTGCATTTCCTCCCCCTTGTACAGTTCTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CCA 90 bp AGCCAGCAGCACGCTAGGCAGGGGTGTCTCTGGGCTGAGGCACTTTaGCAGCACTTGGAACACACACTGGAACCCTTTGGTAGAGTGCTG +
Preference number: 1 (lower is better)
Translates to: SQQHARQGCLWAEAL*QHLEHTLEPFGRVL
Trigger: CAGCACTCTACCAAAGGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCTAGCGTGCTGCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR TCA 90 bp CGCAGGAAGGCTAGGAGCAGGTTGGCCAGGTTGTCATCAAAACATTaGCGCCCATGCGCTGCCAGCACAGCTGTGCTCAGACCTGTGATC +
Preference number: 1 (lower is better)
Translates to: RRKARSRLARLSSKH*RPCAASTAVLRPVI
Trigger: GATCACAGGTCTGAGCACAGCTGTGCTGGCAGCGCATGGGCGTCAATGTTTTGATGACAACCTGGCCAACCTGCTCCTAGCCTTCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR TCA 90 bp GCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTaGTGTACATGTACAGCAGCAGCAGGAGGCAGCCTTCTGAGTGGG +
Preference number: 1 (lower is better)
Translates to: AGAIVSPRPLCQAVM*CTCTAAAGGSLLSG
Trigger: CCCACTCAGAAGGCTGCCTCCTGCTGCTGCTGTACATGTACATCACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR TCA 90 bp GCATCACCTGGTCAAACTGATGCAGGACCTCCACGCAGTGCATCATaGAGAGCTTGTCCTTCTGCGATAGGCCGTGCAGCAGCAGCACCG +
Preference number: 1 (lower is better)
Translates to: ASPGQTDAGPPRSAS*RACPSAIGRAAAAP
Trigger: CGGTGCTGCTGCTGCACGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCACTGCGTGGAGGTCCTGCATCAGTTTGACCAGGTGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR TCA 90 bp AGCCCTCGGATGAGCATGCTGACCCCCGGCATCACCTGGTCAAACTaGTGCAGGACCTCCACGCAGTGCATCATGAAGAGCTTGTCCTTC +
Preference number: 1 (lower is better)
Translates to: SPRMSMLTPGITWSN*CRTSTQCIMKSLSF
Trigger: GAAGGACAAGCTCTTCATGATGCACTGCGTGGAGGTCCTGCATCAGTTTGACCAGGTGATGCCGGGGGTCAGCATGCTCATCCGAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 90 bp GGCCAAGAGCCACCTCCTTCCCTGCCACACAATGGTTTCTTCCCATaGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGG +
Preference number: 1 (lower is better)
Translates to: GQEPPPSLPHNGFFP*PQPKAMTQDNSTGR
Trigger: CCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCATGGGAAGAAACCATTGTGTGGCAGGGAAGGAGGTGGCTCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 90 bp CCTGGTTGTGGCCAGGTGTGCAGTGGTTGTGACAGCAGATGGTCTTaGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGAT +
Preference number: 1 (lower is better)
Translates to: PGCGQVCSGCDSRWS*LGPSRGCDPIHGPD
Trigger: ATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGACCATCTGCTGTCACAACCACTGCACACCTGGCCACAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 90 bp CCAGGTGCTCCGCTTCTCTTAGCAGCTGCCAAGTCCTGCAGGGCCTaGCAGTGTAAGCCGATGAAGAACTGTACAAGGGGGAGGAAATGC +
Preference number: 1 (lower is better)
Translates to: PGAPLLLAAAKSCRA*QCKPMKNCTRGRKC
Trigger: GCATTTCCTCCCCCTTGTACAGTTCTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTTGGCAGCTGCTAAGAGAAGCGGAGCACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CCA 90 bp AGCCAGCAGCACGCTAGGCAGGGGTGTCTCTGGGCTGAGGCACTTTaGCAGCACTTGGAACACACACTGGAACCTGGGCAAGAAATCACA +
Preference number: 1 (lower is better)
Translates to: SQQHARQGCLWAEAL*QHLEHTLEPGQEIT
Trigger: TGTGATTTCTTGCCCAGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCTAGCGTGCTGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR GCA 90 bp GCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGGTGTaGAGTGGTTGTGACAGCAGATGGTCTTGGCTTGGTCCTAGCAGA +
Preference number: 1 (lower is better)
Translates to: ALSKAGTSVPGCGQV*SGCDSRWSWLGPSR
Trigger: TCTGCTAGGACCAAGCCAAGACCATCTGCTGTCACAACCACTGCACACCTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 90 bp CAGTCACAGAGAAGCCTTCCAGGATGCACACTGAGTCCTCAGGGTTaGTCTCTACCCCAGAGCTCACGCAGGAGGAATGTGTCGGTGAGT +
Preference number: 1 (lower is better)
Translates to: QSQRSLPGCTLSPQG*SLPQSSRRRNVSVS
Trigger: ACTCACCGACACATTCCTCCTGCGTGAGCTCTGGGGTAGAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAAGGCTTCTCTGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CCA 90 bp GGTAGAGTGCTGAGGGAGACTGGATTACTGGATGAGGGGGTGGGCTaGTTGTGTTCACAGTTCTCCCCAATCTTGCGGCTCTGGGCAAGA +
Preference number: 1 (lower is better)
Translates to: GRVLRETGLLDEGVG*LCSQFSPILRLWAR
Trigger: TCTTGCCCAGAGCCGCAAGATTGGGGAGAACTGTGAACACAACCAGCCCACCCCCTCATCCAGTAATCCAGTCTCCCTCAGCACTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR TCA 90 bp TCAGGGCTGAGAGGGAAAATGACCCATCATAAGAACCTGTGGTCCTaGGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCT +
Preference number: 1 (lower is better)
Translates to: SGLRGKMTHHKNLWS*GLTFQPRYCQTLVA
Trigger: AGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACAGGTTCTTATGATGGGTCATTTTCCCTCTCAGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR TCA 90 bp AAGAATGCTAAGTGCAGTCACAGAGAAGCCTTCCAGGATGCACACTaGGTCCTCAGGGTTGGTCTCTACCCCAGAGCTCACGCAGGAGGA +
Preference number: 1 (lower is better)
Translates to: KNAKCSHREAFQDAH*VLRVGLYPRAHAGG
Trigger: TCCTCCTGCGTGAGCTCTGGGGTAGAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAAGGCTTCTCTGTGACTGCACTTAGCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR TCA 90 bp GACAGTAATAGGGAGACGACTGCTCCGCTGTGGCACACCAGGTGCTaGAGAATGCTAAGTGCAGTCACAGAGAAGCCTTCCAGGATGCAC +
Preference number: 1 (lower is better)
Translates to: DSNRETTAPLWHTRC*RMLSAVTEKPSRMH
Trigger: GTGCATCCTGGAAGGCTTCTCTGTGACTGCACTTAGCATTCTTCAGCACCTGGTGTGCCACAGCGGAGCAGTCGTCTCCCTATTACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR TCA 90 bp AGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGTGGTGCTGGTGCCACCATGTGGCTG +
Preference number: 1 (lower is better)
Translates to: SQFSGQFLLVTALIS*CGKERSGAGATMWL
Trigger: CAGCCACATGGTGGCACCAGCACCACTCCTTTCCTTACCACATCAACTGATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
3UTR TCA 90 bp CTCCATCACGTGAGCACTCATTCCGGGCAACCAGATTCAGTCCAGTaGATGCCAGGTTCTGTGCTTCTCTCAGGGCTGAGAGGGAAAATG +
Preference number: 1 (lower is better)
Translates to: LHHVSTHSGQPDSVQ*MPGSVLLSGLRGKM
Trigger: CATTTTCCCTCTCAGCCCTGAGAGAAGCACAGAACCTGGCATTCACTGGACTGAATCTGGTTGCCCGGAATGAGTGCTCACGTGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CAA 90 bp CCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTGCTGGTCGGTCCTaGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGTCTGTGCA +
Preference number: 2 (lower is better)
Translates to: PCPADSALSASAGRS*GVPLPSALSATVCA
Trigger: TGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR TCA 90 bp GCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTGCTGGGAGGAATGTGTCGGTaGGTCCCCAGGTGCTCCGCT +
Preference number: 2 (lower is better)
Translates to: AVQQQHRVPQTAHCPPLLGGMCR*VPRCSA
Trigger: AGCGGAGCACCTGGGGACTCACCGACACATTCCTCC...CAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR GCA 90 bp AGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCCGGGGGCAGGGCCTaGGAGCCCATGGTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: SSRSYTLLGAPAAALSCPPGGRA*EPMVGY
Trigger: GTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGG...TGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp GCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTGCTGCAGGAGGCAGCCTTCTaGGTGGGAACAGAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: AVQQQHRVPQTAHCPPLLQEAAF*VGTELR
Trigger: CCTCAGCTCTGTTCCCACTCAGAAGGCTGCCTCCTG...CAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR GCA 90 bp GGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGCTGGGAGCCCCTGCTaGGGCCCTTTCATGCCCACC +
Preference number: 2 (lower is better)
Translates to: GPGHHPQPCASLEGTAHTAGSPC*GPFMPT
Trigger: GGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGC...TGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp ACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCACTGCTGGGAGCCCCTaGTGCGGCCCTTTCATGCCC +
Preference number: 2 (lower is better)
Translates to: TRAVVPDQLPVLHTAGSPTAGSP*CGPFMP
Trigger: GGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGT...GGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp GGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTACTGCTGGGAGCCCCTaGTGCGGCCCTTTCATGCCC +
Preference number: 2 (lower is better)
Translates to: GQWCQTSSRSYTLLGAPATAGSP*CGPFMP
Trigger: GGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGT...AGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp CCACACTCCACCTCGGGGTCTTCCACATCGGTTTCCGCGGCACAGAGGTCATCCGAGCCAGGCCCGCCCTaGTCGTCAGCCTGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: PHSTSGSSTSVSAAQRSSEPGPP*SSACLV
Trigger: GACCAGGCAGGCTGACGAGCAGGGCGGGCCTGGCTC...GGATGACCTCTGTGCCGCGGAAACCGATGTGGAAGACCCCGAGGTGGAGTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR GCA 90 bp TCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCAGCGCAGCCCTGCTCGTCAGCCTaGCTGGTCTGTCCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: SLGRVLRGCLLAPGPSAQPCSSA*LVCPSH
Trigger: GTGAGAGGGACAGACCAGGCAGGCTGACGAGCAGGG...CTGCGCTGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCAGCGCAGAGTGCCCCCTTAGTCTaGGGTGGGGGAACCCATGGC +
Preference number: 2 (lower is better)
Translates to: SLGRVLRGCLLAPGPSAQSAPLV*GGGTHG
Trigger: GCCATGGGTTCCCCCACCCCAGACTAAGGGGGCACT...CTGCGCTGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR CCA 90 bp TCTGCGATAGGCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGTTGGAGCCAGTGACTaGGGGCAAGGGGCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: SAIGRAAAAPCPADSALSVGASD*GQGALH
Trigger: GTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC...GGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR GCA 90 bp GGCAGCCTTCTGAGTGGGAACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCTGCGGCCCTTTCATaGCCACCTGTGGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: GSLLSGNRAEVPAGRGPPAAALS*PPVGPS
Trigger: ACTGGGACCCACAGGTGGGCATGAAAGGGCCGCAGC...TGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTTCCCACTCAGAAGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR GCA 90 bp ACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCAACCCATGGCCCTCCTaGCCTGCGCCATCCCATTGT +
Preference number: 2 (lower is better)
Translates to: TRAVVPDQLPVLHTAGSPNPWPS*PAPSHC
Trigger: ACAATGGGATGGCGCAGGGCAGGAGGGCCATGGGTT...GGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR GCA 90 bp TCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGCGTGTTCTGAGGGGCTaGTTGCTCGCTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: SRAHLWTASRHSSVTLGWRVLRG*LLAPGP
Trigger: AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACG...CCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp GGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACACTCTCACCCTCAGCCGTGTaGGAGTCTGGAGGGGACTGC +
Preference number: 2 (lower is better)
Translates to: GVVLVPPCGWTLRASATLSPSAV*ESGGDC
Trigger: GCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGA...GAGTGTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CCA 90 bp AGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGAAGGACCAGGGCAGTaGTGCCAGACCAGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: RTSPSAVCESGGDCPYRREGPGQ*CQTSSR
Trigger: CCGGGAGCTGGTCTGGCACCACTGCCCTGGTCCTTC...TCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp GGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCGAAGGACCAGGGCAGTaGTGCCAGACCAGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: GPQRPSKIHSCGLLVAQCEGPGQ*CQTSSR
Trigger: CCGGGAGCTGGTCTGGCACCACTGCCCTGGTCCTTC...GCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp CTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCACAGCTGTGGCCTGCTaGTGGCACAATGCACCGGGG +
Preference number: 2 (lower is better)
Translates to: LSRAHLWTASRHSSVTLGTAVAC*WHNAPG
Trigger: CCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGT...GCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TGGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCTCCCGCGGCTCTCGCTaGCAGCAGTGGCGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: WPQPKAMTQDNSTGRAGLSRGSR*QQWREV
Trigger: CACTTCCCGCCACTGCTGCCAGCGAGAGCCGCGGGA...GAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp CTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGGTCGGGCCTGCGAGCCCATaGTTGGGTACGTACCTGCTG +
Preference number: 2 (lower is better)
Translates to: LTHCWEPLLRPFHAHLWVGPASP*LGTYLL
Trigger: CAGCAGGTACGTACCCAACCATGGGCTCGCAGGCCC...GACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp CAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCCAGGCACCAGGGCTGTaGCTGGCGCCGCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: QRSDAIHTEGTIQSTGEAQAPGL*LAPQEG
Trigger: GCCTTCCTGCGGCGCCAGCCACAGCCCTGGTGCCTG...GGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TCTGCGATAGGCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAG +
Preference number: 2 (lower is better)
Translates to: SAIGRAAAAPCPADSALSRQGCL*AEALWQ
Trigger: CTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCT...GGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR TCA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGAGCAGTGGCGGGAAGTaGAACTTGGCGTGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPSSGGK*NLAWAR
Trigger: GCGGGCCCACGCCAAGTTTCACTTCCCGCCACTGCT...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp CTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGCAGCTGGAAGGACACTGCTGGGAGCCCCTaGTGCGGCCCTTTCATGCCC +
Preference number: 2 (lower is better)
Translates to: LVAQCTGAIIPVTGSWKDTAGSP*CGPFMP
Trigger: GGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGT...GTCCTTCCAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp TGGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCCCGGTCTTACACACTaGTGGGAGCCCCTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: WPQPKAMTQDNSTGRAGLPGLTH*WEPLLR
Trigger: CCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGG...GAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp AGCACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTAATGGCCCTCCTGCCCTaGGCCATCCCATTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: STGEAQHSQLCLEQGEVVMALLP*AIPLWG
Trigger: CCCCCACAATGGGATGGCGCAGGGCAGGAGGGCCAT...TACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR GCA 90 bp GTGTGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCACGCTGGCTGCAGGGCTaGAGGCCTTCCCCGGAGCCA +
Preference number: 2 (lower is better)
Translates to: VWPGIVHTVWLLPRSGWPRWLQG*RPSPEP
Trigger: TGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCG...TGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp TCTGCGATAGGCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCCAGCATAGCCAGCTCTaGTTGGAGCAGGGGGAAGTC +
Preference number: 2 (lower is better)
Translates to: SAIGRAAAAPCPADSALSQHSQL*LEQGEV
Trigger: GACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTG...GGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CCA 90 bp AGCACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTAGAAGGACCAGGGCAGTaGTGCCAGACCAGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: STGEAQHSQLCLEQGEVVEGPGQ*CQTSSR
Trigger: CCGGGAGCTGGTCTGGCACCACTGCCCTGGTCCTTC...TACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp AGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGTGTAGATGCTGCCACAGCTGTGGCCTGCTaGTGGCACAATGCACCGGGG +
Preference number: 2 (lower is better)
Translates to: SRVRVWRGLPIQASVDAATAVAC*WHNAPG
Trigger: CCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGT...GGCAGCATCTACACTCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TCTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCTCCCGCGGCTCTCGCTaGCAGCAGTGGCGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: SWLGPSRGCDPIHGPDGASRGSR*QQWREV
Trigger: CACTTCCCGCCACTGCTGCCAGCGAGAGCCGCGGGA...GGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGTCCCGCGGCTCTCGCTaGCAGCAGTGGCGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQSRGSR*QQWREV
Trigger: CACTTCCCGCCACTGCTGCCAGCGAGAGCCGCGGGA...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGGGTGGGGGAACCCATaGCCCTCCTGCCCTGCGCCA +
Preference number: 2 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPAGWGNP*PSCPAP
Trigger: TGGCGCAGGGCAGGAGGGCCATGGGTTCCCCCACCC...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR CCA 90 bp AGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGCCTGGAGAGGAGCATaGGGTGGGTGTGTGAGTGCC +
Preference number: 2 (lower is better)
Translates to: RTSPSAVCESGGDCPYRRAWRGA*GGCVSA
Trigger: GGCACTCACACACCCACCCCATGCTCCTCTCCAGGC...TCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR CCA 90 bp GGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACATCCGTGACCTTGGGCTaGGAGAAGGGCAAGCCAGTG +
Preference number: 2 (lower is better)
Translates to: GPGHHPQPCASLEGTAHTSVTLG*EKGKPV
Trigger: CACTGGCTTGCCCTTCTCCCAGCCCAAGGTCACGGA...TGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAG +
Preference number: 2 (lower is better)
Translates to: SRAHLWTASRHSSVTLGWRQGCL*AEALWQ
Trigger: CTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCT...CCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CCA 90 bp TCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCAGCGCAGGGGAGACTGGATTACTaGATGAGGGGGTGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: SLGRVLRGCLLAPGPSAQGRLDY*MRGWAG
Trigger: ACCAGCCCACCCCCTCATCCAGTAATCCAGTCTCCC...CTGCGCTGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR TCA 90 bp TCGCTGGCTGCAGGGCTGCAGGCCTTCCCCGGAGCCACACACAGGGAGAGCTTGCCCAGCCCAAAGCAATaGCTCAGGACAATTCCACAG +
Preference number: 2 (lower is better)
Translates to: SLAAGLQAFPGATHRESLPSPKQ*LRTIPQ
Trigger: CTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGG...CAAGCTCTCCCTGTGTGTGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp GAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCAGCAGTGGCGGGAAGTaGAACTTGGCGTGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: EGQASGLHVEKDEGLHGPSSGGK*NLAWAR
Trigger: GCGGGCCCACGCCAAGTTTCACTTCCCGCCACTGCT...GGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp CCAGGGTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGCAGGCACAGCTCCGTaGCCTTGGGCTGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: PGSFTGGRSLVPLLSPRLAGTAP*PWAGRR
Trigger: CCTTCTCCCAGCCCAAGGTCACGGAGCTGTGCCTGC...CAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp AGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGATCCACAGCTGTGGCCTaGTGGTGGCACAATGCACCG +
Preference number: 2 (lower is better)
Translates to: RTSPSAVCESGGDCPYRRSTAVA*WWHNAP
Trigger: CGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGA...TCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGTTGACGCCCATGCGCTaGCAGCACAGCTGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRLTPMR*QHSCAQ
Trigger: CTGAGCACAGCTGTGCTGGCAGCGCATGGGCGTCAA...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp CAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCAGGAAAGGAGTGGTGCTaGTGCCACCATGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: QTSSRSYTLLGAPAAALSGKEWC*CHHVAG
Trigger: TCCAGCCACATGGTGGCACCAGCACCACTCCTTTCC...TGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp AGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGGCCAGCCAGTTCTCTaGGCAGTTCCTGCTGGTCAC +
Preference number: 2 (lower is better)
Translates to: RTSPSAVCESGGDCPYRRGQPVL*AVPAGH
Trigger: GTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCC...TCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp CCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCTTCCGCTGTGGCCTGCTGGTaGCACAATGCACCGGGGCCA +
Preference number: 2 (lower is better)
Translates to: PAQSNDSGQFHRQGRAPSAVACW*HNAPGP
Trigger: TGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGC...GGAAGGAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp GAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCCAAGATCCACAGCTGTaGCCTGCTGGTGGCACAATG +
Preference number: 2 (lower is better)
Translates to: ELRCQLVVVRQQGEELNSQDPQL*PAGGTM
Trigger: CATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTG...GCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CCA 90 bp ACCTCTTGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGGTGCCAGCTGGTCGTaGTCCGCCAGCAGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: TSCSSWSHCVSKATLSGRGASWS*SASRER
Trigger: CCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACC...ACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACAAGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR CCA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGGTTGGAGCCAGTGACTaGGGGCAAGGGGCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPVGASD*GQGALH
Trigger: GTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CCA 90 bp CAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCACTGTCCGCCTCTGCTaGTCGGTCCTTGGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: QRSDAIHTEGTIQSTGEATVRLC*SVLGGP
Trigger: GGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGT...GGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CCA 90 bp GCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGATGAGGGGGTGGGCTaGTTGTGTTCACAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: AVVPDQLPVLHTAGSPCCDEGVG*LCSQFS
Trigger: GGAGAACTGTGAACACAACCAGCCCACCCCCTCATC...GCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR CAA 90 bp TCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTaGGGCTGGGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAG +
Preference number: 2 (lower is better)
Translates to: SRAHLWTASRHSSVT*GWEKGKPVASMSKK
Trigger: CTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCCCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp GTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGCAGTGGCGGGAAGTaGAACTTGGCGTGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: VLHWRKILGTPALSKAGTSSGGK*NLAWAR
Trigger: GCGGGCCCACGCCAAGTTTCACTTCCCGCCACTGCT...AGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp CAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCCCCCATACATGGGCCTaGTGGTGCCGAAAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: QRSDAIHTEGTIQSTGEAPHTWA*WCRKAW
Trigger: CCAGGCCTTTCGGCACCATCAGGCCCATGTATGGGG...GGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp AACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAATGGGTCTCCATCACGTaGGCACTCATTCCGGGCAAC +
Preference number: 2 (lower is better)
Translates to: NRAEVPAGRGPPAGRGAQWVSIT*ALIPGN
Trigger: GTTGCCCGGAATGAGTGCTCACGTGATGGAGACCCA...TTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR GCA 90 bp TCCAGGGCCTTCAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCACCCGGTCTTACACACTaGTGGGAGCCCCTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: SRAFSAVMLSTQKAPSRAPGLTH*WEPLLR
Trigger: CCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGG...TGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTGAAGGCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp AGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGACTGCTGGTGGCACAATaGACCGGGGCCATCATACCA +
Preference number: 2 (lower is better)
Translates to: RTSPSAVCESGGDCPYRRLLVAQ*TGAIIP
Trigger: TGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAG...TCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp CTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGCCCTGCTCGTCAGCCTaGCTGGTCTGTCCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: LGTPALSKAGTSVPGCGQPCSSA*LVCPSH
Trigger: GTGAGAGGGACAGACCAGGCAGGCTGACGAGCAGGG...CTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp CTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGGTCATCTCAGGCCTTCCCTaGACAATCCTGCCCTGTCTG +
Preference number: 2 (lower is better)
Translates to: LTHCWEPLLRPFHAHLWVISGLP*TILPCL
Trigger: CAGACAGGGCAGGATTGTGCAGGGAAGGCCTGAGAT...GACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR GCA 90 bp ATCGGTTTCCGCGGCACAGAGGTCATCCAGGGCTGCCTCTTCACAGTCCGTCACTTCTGCGATAGGCCGTaGAGCAGCAGCACCGTGTCC +
Preference number: 2 (lower is better)
Translates to: IGFRGTEVIQGCLFTVRHFCDRP*SSSTVS
Trigger: GGACACGGTGCTGCTGCTGCACGGCCTATCGCAGAA...GTGACGGACTGTGAAGAGGCAGCCCTGGATGACCTCTGTGCCGCGGAAACCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR CCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGGTCTTACACACTGCTaGGAGCCCCTGCTGCGGCCC +
Preference number: 2 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPAGLTHC*EPLLRP
Trigger: GGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACC...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp ATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCGCTGTGGCCTGCTGGTaGCACAATGCACCGGGGCCA +
Preference number: 2 (lower is better)
Translates to: ILGTPALSKAGTSVPGCGAVACW*HNAPGP
Trigger: TGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGC...GCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp ACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTAGCGTCTCGCTGGCAGCAGTaGCGGGAAGTGAAACTTGGC +
Preference number: 2 (lower is better)
Translates to: TGEAQHSQLCLEQGEVVASRWQQ*REVKLG
Trigger: GCCAAGTTTCACTTCCCGCCACTGCTGCCAGCGAGA...CGCTACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp ATCGGTTTCCGCGGCACAGAGGTCATCCAGGGCTGCCTCTTCACAGTCCGTCACAGGAAGCTGGCAGAGTaGGAAGGCCCTTCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: IGFRGTEVIQGCLFTVRHRKLAE*EGPSAS
Trigger: GGAGGCAGAAGGGCCTTCCCACTCTGCCAGCTTCCT...GTGACGGACTGTGAAGAGGCAGCCCTGGATGACCTCTGTGCCGCGGAAACCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CCA 90 bp GAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCTGGGCTGAGGCACTTTaGCAGCACTTGGAACACACA +
Preference number: 2 (lower is better)
Translates to: ELRCQLVVVRQQGEELNSWAEAL*QHLEHT
Trigger: TGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCA...GCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CAA 90 bp GCCCATACAGGCGAGTGTAGATGCTGCCTAGGCTATAGCTCTTCCTaGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: AHTGECRCCLGYSSS*GRVLRGCLLAPGPS
Trigger: TGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAGGCAGCATCTACACTCGCCTGTATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp GTGTGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCACTGTGCTCAGACCTGTaGTCTCGCTGGCTGCAGGGC +
Preference number: 2 (lower is better)
Translates to: VWPGIVHTVWLLPRSGWPLCSDL*SRWLQG
Trigger: GCCCTGCAGCCAGCGAGATCACAGGTCTGAGCACAG...TGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp CTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCAGCCACCTCCTTCCCTaGCACACAATGGTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: LSRAHLWTASRHSSVTLGSHLLP*HTMVSS
Trigger: GGAAGAAACCATTGTGTGGCAGGGAAGGAGGTGGCT...GCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp TCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGGGGTGGGTGTGTGAGTaGCCAGTGTTAAGATCCGAA +
Preference number: 2 (lower is better)
Translates to: SRAHLWTASRHSSVTLGWGWVCE*PVLRSE
Trigger: TTCGGATCTTAACACTGGGCACTCACACACCCACCC...CCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR GCA 90 bp GTGTGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGGGGGCAAGGGGCTCTaGACACCAAGCTTAGCCAGG +
Preference number: 2 (lower is better)
Translates to: VWPGIVHTVWLLPRSGWPGGKGL*TPSLAR
Trigger: CCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCC...TGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CCA 90 bp GTGTGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCGGGAAGTGAAACTTaGCGTGGGCCCGCCTACAGG +
Preference number: 2 (lower is better)
Translates to: VWPGIVHTVWLLPRSGWPAGSET*RGPAYR
Trigger: CCTGTAGGCGGGCCCACGCCAAGTTTCACTTCCCGC...TGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGGGCCTGCGAGCCCATaGTTGGGTACGTACCTGCTG +
Preference number: 2 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPAGPASP*LGTYLL
Trigger: CAGCAGGTACGTACCCAACCATGGGCTCGCAGGCCC...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CAA 90 bp CCCTCCCTGGATAGGGCTCCAGGGTCCTTCACTGGAGGAAGATCCTaGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTT +
Preference number: 2 (lower is better)
Translates to: PSLDRAPGSFTGGRS*VPLLSPRLGLVFLV
Trigger: AACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGACCCTGGAGCCCTATCCAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGTCTCCCTCTTCACATaGCTCGGCCCCTCCCCTAGT +
Preference number: 2 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPAVSLFT*LGPSPS
Trigger: ACTAGGGGAGGGGCCGAGTCATGTGAAGAGGGAGAC...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR TCA 90 bp TATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTCATGGGGTGGGTGTGTaGGTGCCCAGTGTTAAGATC +
Preference number: 2 (lower is better)
Translates to: YSSSLGRVLRGCLLAPGPHGVGV*VPSVKI
Trigger: GATCTTAACACTGGGCACTCACACACCCACCCCATG...AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR TCA 90 bp TGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGCAGGAGGCAGCCTTCTaGGTGGGAACAGAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: CSSWSHCVSKATLSGRDVQEAAF*VGTELR
Trigger: CCTCAGCTCTGTTCCCACTCAGAAGGCTGCCTCCTG...CACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR GCA 90 bp CCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCTTCCCTGCTGGTGGCACAATaGACCGGGGCCATCATACCA +
Preference number: 2 (lower is better)
Translates to: PAQSNDSGQFHRQGRAPSLLVAQ*TGAIIP
Trigger: TGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAG...GGAAGGAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp GGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGTCCACAGCTGTGGCCTaGTGGTGGCACAATGCACCG +
Preference number: 2 (lower is better)
Translates to: GEGQASGLHVEKDEGLHGSTAVA*WWHNAP
Trigger: CGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGA...CCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp CTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCATTCCCTGCACAATCCTaGCCTGTCTGCGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: LGYSSSLGRVLRGCLLAPFPAQS*PVCELQ
Trigger: CTGGAGCTCGCAGACAGGGCAGGATTGTGCAGGGAA...TGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR CCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCGGAAAGGAGTGGTGCTaGTGCCACCATGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAGKEWC*CHHVAG
Trigger: TCCAGCCACATGGTGGCACCAGCACCACTCCTTTCC...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp CTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGGGAAAGGAGTGGTGCTaGTGCCACCATGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: LGTPALSKAGTSVPGCGQGKEWC*CHHVAG
Trigger: TCCAGCCACATGGTGGCACCAGCACCACTCCTTTCC...CTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TCTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGGAAAGGAGTGGTGCTaGTGCCACCATGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SWLGPSRGCDPIHGPDGAGKEWC*CHHVAG
Trigger: TCCAGCCACATGGTGGCACCAGCACCACTCCTTTCC...GGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp GGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGAATGGTTTCTTCCCATaGCCCCAGCCCAAAGCAATG +
Preference number: 2 (lower is better)
Translates to: GLTHCWEPLLRPFHAHLWNGFFP*PQPKAM
Trigger: CATTGCTTTGGGCTGGGGCCATGGGAAGAAACCATT...CCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp CAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGTTCCCTGCCACACAATaGTTTCTTCCCATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: QRPSKIHSCGLLVAQCTGFPATQ*FLPMAP
Trigger: TGGGGCCATGGGAAGAAACCATTGTGTGGCAGGGAA...CCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTCAAGATCCACAGCTGTaGCCTGCTGGTGGCACAATG +
Preference number: 2 (lower is better)
Translates to: YSSSLGRVLRGCLLAPGPQDPQL*PAGGTM
Trigger: CATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTG...AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATGCTCGTCAGCCTGCCTaGTCTGTCCCTCTCACCACC +
Preference number: 2 (lower is better)
Translates to: RSVTMGTGSATARDRKKDARQPA*SVPLTT
Trigger: GGTGGTGAGAGGGACAGACCAGGCAGGCTGACGAGC...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCATCCGTGACCTTGGGCTaGGAGAAGGGCAAGCCAGTG +
Preference number: 2 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPASVTLG*EKGKPV
Trigger: CACTGGCTTGCCCTTCTCCCAGCCCAAGGTCACGGA...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp GGAGCAGGGGGAAGTCGTAGCGGTCACCATTGTGTGCCACCAGGCACCAGGGCTCACTTTGGCAGCACTTaGAACACACACTGGAACCCT +
Preference number: 2 (lower is better)
Translates to: GAGGSRSGHHCVPPGTRAHFGST*NTHWNP
Trigger: AGGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTG...AGCCCTGGTGCCTGGTGGCACACAATGGTGACCGCTACGACTTCCCCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR CAA 90 bp GTTGTGGCCAGGTGTGCAGTGGTTGTGACAGCAGATGGTCTTGGCTaGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTG +
Preference number: 2 (lower is better)
Translates to: VVARCAVVVTADGLG*VLAEAVTPYMGLMV
Trigger: CACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGACCATCTGCTGTCACAACCACTGCACACCTGGCCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp CCAGGGTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGCACATTCGACTGTCTaGGAGGGTCTCCCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: PGSFTGGRSLVPLLSPRLAHSTV*EGLPLH
Trigger: GTGAAGAGGGAGACCCTCTCAGACAGTCGAATGTGC...CAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR TCA 90 bp AAGCCCTCGGATGAGCATGCTGACCCCCGGCATCACCTGGTCAAACTGATGCAGAAGAACCTGTGGTCCTaGGGCCTGACATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: KPSDEHADPRHHLVKLMQKNLWS*GLTFQP
Trigger: TGGCTGGAATGTCAGGCCTCAGGACCACAGGTTCTT...CTGCATCAGTTTGACCAGGTGATGCCGGGGGTCAGCATGCTCATCCGAGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR TCA 90 bp TGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGATGTACATGGAGTGGGAACAGAGCTaGGGTGCCAGCTGGTCGTGG +
Preference number: 2 (lower is better)
Translates to: WSHCVSKATLSGRDVMYMEWEQS*GASWSW
Trigger: CCACGACCAGCTGGCACCTCAGCTCTGTTCCCACTC...CATGTACATCACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR CCA 90 bp TCTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGCAGATCAGTTACCATaGGGACGGGCTCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: SWLGPSRGCDPIHGPDGAADQLP*GRAQQQ
Trigger: CTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGC...GGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp AGCACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTATTCCCTGCCACACAATaGTTTCTTCCCATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: STGEAQHSQLCLEQGEVVFPATQ*FLPMAP
Trigger: TGGGGCCATGGGAAGAAACCATTGTGTGGCAGGGAA...TACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp TGGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCTTCCCTGCCACACAATaGTTTCTTCCCATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: WPQPKAMTQDNSTGRAGLFPATQ*FLPMAP
Trigger: TGGGGCCATGGGAAGAAACCATTGTGTGGCAGGGAA...GAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp GGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGTCTCGCTGGCAGCAGTaGCGGGAAGTGAAACTTGGC +
Preference number: 2 (lower is better)
Translates to: GEGQASGLHVEKDEGLHGSRWQQ*REVKLG
Trigger: GCCAAGTTTCACTTCCCGCCACTGCTGCCAGCGAGA...CCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp ATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCTCTCGCTGGCAGCAGTaGCGGGAAGTGAAACTTGGC +
Preference number: 2 (lower is better)
Translates to: ILGTPALSKAGTSVPGCGSRWQQ*REVKLG
Trigger: GCCAAGTTTCACTTCCCGCCACTGCTGCCAGCGAGA...GCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGAGAAGGGCAAGCCAGTaGCCTCCATGTCGAAAAAGA +
Preference number: 2 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRRRASQ*PPCRKR
Trigger: TCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCT...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp CCAGGGTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGCCTACTCCCCAGGTGTaGCCAGGGATAGTCCATACA +
Preference number: 2 (lower is better)
Translates to: PGSFTGGRSLVPLLSPRLPTPQV*PGIVHT
Trigger: TGTATGGACTATCCCTGGCCACACCTGGGGAGTAGG...CAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp GGTAAGGAAAGGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCTTCCTAGGACTGACATaGGAAACAGAGGGAGCAGCC +
Preference number: 2 (lower is better)
Translates to: GKERSGAGATMWLDTQGLFLGLT*ETEGAA
Trigger: GGCTGCTCCCTCTGTTTCCCATGTCAGTCCTAGGAA...GAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCCTTTCCTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR TCA 90 bp CCTGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: PAPGGPQRPSKIHSCGLLTALIS*CGKERS
Trigger: ACTCCTTTCCTTACCACATCAACTGATTAAAGCAGT...CAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp AGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACACTCCAAGAACGGATTCCGTCTaGTGTAGTGAGTCTCGCAAA +
Preference number: 2 (lower is better)
Translates to: SGAGATMWLDTQGLSHTPRTDSV*CSESRK
Trigger: TTTGCGAGACTCACTACATCAGACGGAATCCGTTCT...TGGAGTGTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGACAGCAGATGGTCTTaGCTTGGTCCTAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPADSRWS*LGPSRG
Trigger: GCCTCTGCTAGGACCAAGCCAAGACCATCTGCTGTC...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp TTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACACCTTTGGTAGAGTGCTaGGGGAGACTGGATTACTGG +
Preference number: 2 (lower is better)
Translates to: FLKADQLPWGRAQQQPGTPLVEC*GRLDYW
Trigger: CCAGTAATCCAGTCTCCCTCAGCACTCTACCAAAGG...TGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CCA 90 bp CCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCACCAATCTTGCGGCTCTaGGCAAGAAATCACAGGAAG +
Preference number: 2 (lower is better)
Translates to: PAPPLPLRQTDQTQETRPPILRL*ARNHRK
Trigger: CTTCCTGTGATTTCTTGCCCAGAGCCGCAAGATTGG...TGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CCA 90 bp CTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGCAGCTGGAAGGACACTTGGAACACACACTaGAACCCTTTGGTAGAGTGC +
Preference number: 2 (lower is better)
Translates to: LVAQCTGAIIPVTGSWKDTWNTH*NPLVEC
Trigger: GCACTCTACCAAAGGGTTCCAGTGTGTGTTCCAAGT...GTCCTTCCAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR CAA 90 bp AGAGTGCTGAGGGAGACTGGATTACTGGATGAGGGGGTGGGCTGGTaGTGTTCACAGTTCTCCCCAATCTTGCGGCTCTGGGCAAGAAAT +
Preference number: 2 (lower is better)
Translates to: RVLRETGLLDEGVGW*CSQFSPILRLWARN
Trigger: ATTTCTTGCCCAGAGCCGCAAGATTGGGGAGAACTGTGAACACAACCAGCCCACCCCCTCATCCAGTAATCCAGTCTCCCTCAGCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR TCA 90 bp CGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: RSYTLLGAPAAALSCPPVTALIS*CGKERS
Trigger: ACTCCTTTCCTTACCACATCAACTGATTAAAGCAGT...CACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR TCA 90 bp GTGATGTACATGTACAGCAGCAGCAGGAGGCAGCCTTCTGAGTGGGAACAGAGCCCATCACTAAGCCTGTaGACCAGGCTCCTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: VMYMYSSSRRQPSEWEQSPSLSL*TRLLFP
Trigger: AGGAAACAGGAGCCTGGTTCACAGGCTTAGTGATGG...GCTCTGTTCCCACTCAGAAGGCTGCCTCCTGCTGCTGCTGTACATGTACATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR GCA 90 bp ATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCAGTTCTCCCCAATCTTaGGGCTCTGGGCAAGAAATC +
Preference number: 2 (lower is better)
Translates to: ILGTPALSKAGTSVPGCGSSPQS*GSGQEI
Trigger: GATTTCTTGCCCAGAGCCGCAAGATTGGGGAGAACT...GCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR TCA 90 bp TCACAGAGAAGCCTTCCAGGATGCACACTGAGTCCTCAGGGTTGGTCTCTACCCCCAGATTCAGTCCAGTaGATGCCAGGTTCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: SQRSLPGCTLSPQGWSLPPDSVQ*MPGSVL
Trigger: AAGCACAGAACCTGGCATTCACTGGACTGAATCTGG...GGGTAGAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAAGGCTTCTCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR GCA 90 bp CTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGTTCCTGCTGGTCACTaGTTTAATCAGTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: LGYSSSLGRVLRGCLLAPVPAGH*FNQLMW
Trigger: CCACATCAACTGATTAAAGCAGTGACCAGCAGGAAC...TGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp CCAGCAGCAGAATCTGCCCCCACTCCTGACAGTAATAGGGAGACGACTGCTCCGGTTCCTGCTGGTCACTaGTTTAATCAGTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: PAAESAPTPDSNRETTAPVPAGH*FNQLMW
Trigger: CCACATCAACTGATTAAAGCAGTGACCAGCAGGAAC...CGGAGCAGTCGTCTCCCTATTACTGTCAGGAGTGGGGGCAGATTCTGCTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CCA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATAATGGTTTCTTCCCATaGCCCCAGCCCAAAGCAATG +
Preference number: 2 (lower is better)
Translates to: RSVTMGTGSATARDRKKDNGFFP*PQPKAM
Trigger: CATTGCTTTGGGCTGGGGCCATGGGAAGAAACCATT...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CCA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCCCTCTTCTTGTTTTATaGAGTCACCTCTCAGACTGT +
Preference number: 2 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCPLLVL*SHLSDC
Trigger: ACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGG...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
3UTR-3UTR CCA 90 bp TCTGGGCCTCTTCTTGTTTTATGGAGTCACCTCTCAGACTGTGGGGCTTACTATTATCCTGACTCCGTCTaGCAGGGGTGGGGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: SGPLLVLWSHLSDCGAYYYPDSV*QGWGRD
Trigger: GTCCCTTCCCCACCCCTGCCAGACGGAGTCAGGATA...ATAGTAAGCCCCACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR GCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCGTTCCTGCTGGTCACTaGTTTAATCAGTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFVPAGH*FNQLMW
Trigger: CCACATCAACTGATTAAAGCAGTGACCAGCAGGAAC...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp GTGATGTACATGTACAGCAGCAGCAGGAGGCAGCCTTCTGAGTGGGAACAGAGCAGCAGCCAGTTTATTTaGTCGTTCACTGGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: VMYMYSSSRRQPSEWEQSSSQFI*SFTGLE
Trigger: CTCCAGACCAGTGAACGAGCAAATAAACTGGCTGCT...GCTCTGTTCCCACTCAGAAGGCTGCCTCCTGCTGCTGCTGTACATGTACATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CCA 90 bp CCACACTCCACCTCGGGGTCTTCCACATCGGTTTCCGCGGCACAGAGGTCATCCGCAGGTTTATCAAAATaGAACCTTGAGTGTTTGATC +
Preference number: 2 (lower is better)
Translates to: PHSTSGSSTSVSAAQRSSAGLSK*NLECLI
Trigger: GATCAAACACTCAAGGTTCCATTTTGATAAACCTGC...GGATGACCTCTGTGCCGCGGAAACCGATGTGGAAGACCCCGAGGTGGAGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CCA 90 bp TGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACTCAGACTGCAATGATTaGAGCTTTTTGGAGAATTCC +
Preference number: 2 (lower is better)
Translates to: CPPHCQPLSVQHHRERSDSDCND*SFLENS
Trigger: GGAATTCTCCAAAAAGCTCCAATCATTGCAGTCTGA...GTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CCA 90 bp TGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGATGTACATGTCACCTCTCAGACTGTaGGGCTTACTATCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: WSHCVSKATLSGRDVMYMSPLRL*GLLSSL
Trigger: CAGAGAGGATAGTAAGCCCCACAGTCTGAGAGGTGA...CATGTACATCACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR TCA 90 bp CTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: LGYSSSLGRVLRGCLLAPTALIS*CGKERS
Trigger: ACTCCTTTCCTTACCACATCAACTGATTAAAGCAGT...TGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR GCA 90 bp GTCTTCCACATCGGTTTCCGCGGCACAGAGGTCATCCAGGGCTGCCTCTTCACAAACTGGAGTTCAGACTaGAATGATTGGAGCTTTTTG +
Preference number: 2 (lower is better)
Translates to: VFHIGFRGTEVIQGCLFTNWSSD*NDWSFL
Trigger: CAAAAAGCTCCAATCATTGCAGTCTGAACTCCAGTT...TGTGAAGAGGCAGCCCTGGATGACCTCTGTGCCGCGGAAACCGATGTGGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR TCA 90 bp ACCTCTTGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: TSCSSWSHCVSKATLSGRTALIS*CGKERS
Trigger: ACTCCTTTCCTTACCACATCAACTGATTAAAGCAGT...ACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACAAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR TCA 90 bp GAACCTGTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTATCAAAATGGAACCTTaGGTGTTTGATCTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: EPVVLRPDIPAKVLPNPGIKMEP*VFDLCL
Trigger: GAGACAGAGATCAAACACTCAAGGTTCCATTTTGAT...ACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
3UTR-3UTR GCA 90 bp TGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGATGTACATGGTTCCTGCTGGTCACTaGTTTAATCAGTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: WSHCVSKATLSGRDVMYMVPAGH*FNQLMW
Trigger: CCACATCAACTGATTAAAGCAGTGACCAGCAGGAAC...CATGTACATCACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR CCA 90 bp CACCTGGTCAAACTGATGCAGGACCTCCACGCAGTGCATCATGAAGAGCTTGTCGCTCGTTCACTGGTCTaGAGCTTTGTCCTTAATTCA +
Preference number: 2 (lower is better)
Translates to: HLVKLMQDLHAVHHEELVARSLV*SFVLNS
Trigger: TGAATTAAGGACAAAGCTCCAGACCAGTGAACGAGC...GACAAGCTCTTCATGATGCACTGCGTGGAGGTCCTGCATCAGTTTGACCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CCA 90 bp GAACCTGTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGCAGGTTTATCAAAATaGAACCTTGAGTGTTTGATC +
Preference number: 2 (lower is better)
Translates to: EPVVLRPDIPAKVLPNPGAGLSK*NLECLI
Trigger: GATCAAACACTCAAGGTTCCATTTTGATAAACCTGC...ACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
3UTR-3UTR TCA 90 bp ACCAGATTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCTCTCAGGGCTGAGAGGATCAAAATGGAACCTTaGGTGTTTGATCTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: TRFSPVNARFCASLRAERIKMEP*VFDLCL
Trigger: GAGACAGAGATCAAACACTCAAGGTTCCATTTTGAT...CCTCTCAGCCCTGAGAGAAGCACAGAACCTGGCATTCACTGGACTGAATCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR GCA 90 bp CACTGGAACCTGGGCAAGAAATCACAGGAAGTGTTTTCGGCTAATTTCACCAAACTGAAGAATGCTAAGTaGAGTCACAGAGAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: HWNLGKKSQEVFSANFTKLKNAK*SHREAF
Trigger: GAAGGCTTCTCTGTGACTGCACTTAGCATTCTTCAG...TTTGGTGAAATTAGCCGAAAACACTTCCTGTGATTTCTTGCCCAGGTTCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR GCA 90 bp TCTGGGCCTCTTCTTGTTTTATGGAGTCACCTCTCAGACTGTGGGGCTTACTATGCTTGGGTTTTCTCTTaGTCAAGAAGAAAATGTGAT +
Preference number: 2 (lower is better)
Translates to: SGPLLVLWSHLSDCGAYYAWVFS*SRRKCD
Trigger: ATCACATTTTCTTCTTGAGCAAGAGAAAACCCAAGC...ATAGTAAGCCCCACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGGCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR TCA 90 bp CGTTCACTGGTCTGGAGCTTTGTCCTTAATTCATTCATCTCTGCATCTTTAAACCCTTTTCCTTGTCACTaGGTGCTTGGGTTTTCTCTT +
Preference number: 2 (lower is better)
Translates to: RSLVWSFVLNSFISASLNPFPCH*VLGFSL
Trigger: AAGAGAAAACCCAAGCACTCAGTGACAAGGAAAAGG...GTTTAAAGATGCAGAGATGAATGAATTAAGGACAAAGCTCCAGACCAGTGAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR GCA 72 bp AGCACCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTaGTGGTCGGTCCTTGGGGGTCCCCCTGCCCTCCGC +
Preference number: 3 (lower is better)
Translates to: STVSRRQRTVRL*WSVLGGPPALR
Trigger: GCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGGTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 72 bp ACCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTGCTaGTCGGTCCTTGGGGGTCCCCCTGCCCTCCGCACT +
Preference number: 3 (lower is better)
Translates to: TVSRRQRTVRLC*SVLGGPPALRT
Trigger: AGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR TCA 72 bp TCTCCCGCGGCTCTCGCTGGCAGCAGTGGCGGGAAGTaGAACTTGGCGTGGGCCCGCCTACAGGCCCACGTG +
Preference number: 3 (lower is better)
Translates to: SPAALAGSSGGK*NLAWARLQAHV
Trigger: CACGTGGGCCTGTAGGCGGGCCCACGCCAAGTTTCACTTCCCGCCACTGCTGCCAGCGAGAGCCGCGGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 72 bp CAGACAGCGCACTGTCCGCCTCTGCTGGTCGGTCCTTaGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTG +
Preference number: 3 (lower is better)
Translates to: QTAHCPPLLVGP*GSPCPPHCQPL
Trigger: CAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCGCTGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 72 bp GGCTGCACACTCTCCCGCGGCTCTCGCTGGCAGCAGTaGCGGGAAGTGAAACTTGGCGTGGGCCCGCCTACA +
Preference number: 3 (lower is better)
Translates to: GCTLSRGSRWQQ*REVKLGVGPPT
Trigger: TGTAGGCGGGCCCACGCCAAGTTTCACTTCCCGCCACTGCTGCCAGCGAGAGCCGCGGGAGAGTGTGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 72 bp GACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTaGTGCGGCCCTTTCATGCCCACCTGTGGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: DQLPVLHTAGSP*CGPFMPTCGSQ
Trigger: CTGGGACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 72 bp TTGGAGCAGGGGGAAGTCGTAGCGGTCACCATTGTGTaGCACCAGGCACCAGGGCTGTGGCTGGCGCCGCAG +
Preference number: 3 (lower is better)
Translates to: LEQGEVVAVTIV*HQAPGLWLAPQ
Trigger: CTGCGGCGCCAGCCACAGCCCTGGTGCCTGGTGGCACACAATGGTGACCGCTACGACTTCCCCCTGCTCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 72 bp CCTGGCGTGAGCATCCACCCACCGCAGCAGGGCCTGTaGTCTCCACTGACAGATGCTGAGCAGGGCCAGGAC +
Preference number: 3 (lower is better)
Translates to: PGVSIHPPQQGL*SPLTDAEQGQD
Trigger: GTCCTGGCCCTGCTCAGCATCTGTCAGTGGAGACCACAGGCCCTGCTGCGGTGGGTGGATGCTCACGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CAA 90 bp TCGCTGGCTGCAGGGCTGCAGGCCTTCCCCGGAGCCACACACAGGGAGAGCTTGGAGGGGGTGGGCTGGTaGTGTTCACAGTTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: SLAAGLQAFPGATHRESLEGVGW*CSQFSP
Trigger: TGGGGAGAACTGTGAACACAACCAGCCCACCCCCTC...CAAGCTCTCCCTGTGTGTGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR TCA 72 bp ACCGCAGCAGGGCCTGTGGTCTCCACTGACAGATGCTaGGCAGGGCCAGGACATCACCCTCAGCCGTGTGCG +
Preference number: 3 (lower is better)
Translates to: TAAGPVVSTDRC*AGPGHHPQPCA
Trigger: CGCACACGGCTGAGGGTGATGTCCTGGCCCTGCTCAGCATCTGTCAGTGGAGACCACAGGCCCTGCTGCGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR TCA 72 bp CCATACATGGGCCTGATGGTGCCGAAAGGCCTGGCGTaGGCATCCACCCACCGCAGCAGGGCCTGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: PYMGLMVPKGLA*ASTHRSRACGL
Trigger: GAGACCACAGGCCCTGCTGCGGTGGGTGGATGCTCACGCCAGGCCTTTCGGCACCATCAGGCCCATGTATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR TCA 72 bp AGCAGCAGGAGGCAGCCTTCTGAGTGGGAACAGAGCTaGGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: SSRRQPSEWEQS*GASWSWSASRE
Trigger: CTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTTCCCACTCAGAAGGCTGCCTCCTGCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR GCA 72 bp GTAGGGGGTGGGCAGAAGCACATCTCAGGCCTTCCCTaGACAATCCTGCCCTGTCTGCGAGCTCCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: VGGGQKHISGLP*TILPCLRAPGP
Trigger: GGGCCCTGGAGCTCGCAGACAGGGCAGGATTGTGCAGGGAAGGCCTGAGATGTGCTTCTGCCCACCCCCTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR GCA 72 bp TGTCCGCCTCTGCTGGTCGGTCCTTGGGGGTCCCCCTaGCCTCCGCACTGTCAGCCACTGTCTGTGCAACAT +
Preference number: 3 (lower is better)
Translates to: CPPLLVGPWGSP*PPHCQPLSVQH
Trigger: ATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGGACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 72 bp AGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTaGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: SGARPAPGLTHC*EPLLRPFHAHL
Trigger: CAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CAA 90 bp GGAACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCCTGCCCACCAGAGGCTaGTATCCTGACTCCGTCTGG +
Preference number: 3 (lower is better)
Translates to: GTELRCQLVVVRQQGEELLPTRG*YPDSVW
Trigger: CCAGACGGAGTCAGGATACAAGCCTCTGGTGGGCAG...GAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR GCA 72 bp CAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTaGGGCCCTTTCATGCCCACCTGTGGGTCCCAGTTT +
Preference number: 3 (lower is better)
Translates to: QLPVLHTAGSPC*GPFMPTCGSQF
Trigger: AAACTGGGACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 72 bp ATGCTGAGCAGGGCCAGGACATCACCCTCAGCCGTGTaGGAGTCTGGAGGGGACTGCCCATACAGGCGAGTG +
Preference number: 3 (lower is better)
Translates to: MLSRARTSPSAV*ESGGDCPYRRV
Trigger: CACTCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCCTGCTCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 72 bp GGTCCCCCTGCCCTCCGCACTGTCAGCCACTGTCTGTaGAACATCACCGTGAGCGCTCTGACCACCTCCACA +
Preference number: 3 (lower is better)
Translates to: GPPALRTVSHCL*NITVSALTTST
Trigger: TGTGGAGGTGGTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR CAA 90 bp CAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCCCCTGCGCCATCCCATaGTGGGGGCCACACTCACCG +
Preference number: 3 (lower is better)
Translates to: QRSDAIHTEGTIQSTGEAPCAIP*WGPHSP
Trigger: CGGTGAGTGTGGCCCCCACAATGGGATGGCGCAGGG...GGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR-3UTR CAA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGCCTGCGAGCCCATGGTaGGGTACGTACCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRPASPW*GTYLLL
Trigger: CAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGG...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 72 bp GACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTaGTGGTGGCACAATGCACCGGGGCCATCATACCAG +
Preference number: 3 (lower is better)
Translates to: DPRGLPRSTAVA*WWHNAPGPSYQ
Trigger: CTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 72 bp TGGCAGTTGGAGCCAGTGACTGGGGGCAAGGGGCTCTaGACACCAAGCTTAGCCAGGAGCCACACCACCTCT +
Preference number: 3 (lower is better)
Translates to: WQLEPVTGGKGL*TPSLARSHTTS
Trigger: AGAGGTGGTGTGGCTCCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 72 bp CAGGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTaGAGGGGACTGCCCATACAGGCGAGTGTAGATGCT +
Preference number: 3 (lower is better)
Translates to: QGQDITLSRVRV*RGLPIQASVDA
Trigger: AGCATCTACACTCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CAA 90 bp AACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAAACTGAGTCCTCAGGGTaGGTCTCTACCCCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: NRAEVPAGRGPPAGRGAQTESSG*VSTPEL
Trigger: GAGCTCTGGGGTAGAGACCAACCCTGAGGACTCAGT...TTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR TCA 72 bp CTCTACCCCAGAGCTCACGCAGGAGGAATGTGTCGGTaGGTCCCCAGGTGCTCCGCTTCTCTTAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: LYPRAHAGGMCR*VPRCSASLSSC
Trigger: GCAGCTGCTAAGAGAAGCGGAGCACCTGGGGACTCACCGACACATTCCTCCTGCGTGAGCTCTGGGGTAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR GCA 72 bp TCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATaGACCGGGGCCATCATACCAGTGACAGGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: SKIHSCGLLVAQ*TGAIIPVTGSW
Trigger: CCAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 72 bp ACCTCCACGCAGTGCATCATGAAGAGCTTGTCCTTCTaGGATAGGCCGTGCAGCAGCAGCACCGTGTCCCGC +
Preference number: 3 (lower is better)
Translates to: TSTQCIMKSLSF*DRPCSSSTVSR
Trigger: GCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCACTGCGTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 72 bp GGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATaGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGA +
Preference number: 3 (lower is better)
Translates to: GQGSFLKADQLP*GRAQQQPGTGR
Trigger: TCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 72 bp TGTACAAGGGGGAGGAAATGCACGGCTCCAGGAAGCTaGCAGAGTGGGAAGGCCCTTCTGCCTCCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: CTRGRKCTAPGS*QSGKALLPPSA
Trigger: AGCAGAGGGAGGCAGAAGGGCCTTCCCACTCTGCCAGCTTCCTGGAGCCGTGCATTTCCTCCCCCTTGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CAA 90 bp GATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCCAGCATAGCCCTGCGAGCCCATGGTaGGGTACGTACCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: DAIHTEGTIQSTGEAQHSPASPW*GTYLLL
Trigger: CAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGG...GCTATGCTGGGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CAA 90 bp TCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCAGCGCAGAAGGCTAGGAGCAGGTaGGCCAGGTTGTCATCAAAA +
Preference number: 3 (lower is better)
Translates to: SLGRVLRGCLLAPGPSAQKARSR*ARLSSK
Trigger: TTTTGATGACAACCTGGCCAACCTGCTCCTAGCCTT...CTGCGCTGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR-3UTR CAA 90 bp AGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACAGTTCTCCCCAATCTaGCGGCTCTGGGCAAGAAAT +
Preference number: 3 (lower is better)
Translates to: SSRSYTLLGAPAAALSCPQFSPI*RLWARN
Trigger: ATTTCTTGCCCAGAGCCGCAAGATTGGGGAGAACTG...TGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR TCA 72 bp GGCCCTTCTGCCTCCCTCTGCTGGGTCTCCATCACGTaGGCACTCATTCCGGGCAACCAGATTCAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: GPSASLCWVSIT*ALIPGNQIQSS
Trigger: ACTGGACTGAATCTGGTTGCCCGGAATGAGTGCTCACGTGATGGAGACCCAGCAGAGGGAGGCAGAAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR GCA 72 bp ATCCAGAGCACTGGTGAGGCCCAGCATAGCCAGCTCTaGTTGGAGCAGGGGGAAGTCGTAGCGGTCACCATT +
Preference number: 3 (lower is better)
Translates to: IQSTGEAQHSQL*LEQGEVVAVTI
Trigger: AATGGTGACCGCTACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGTGCTCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 72 bp TGCATCATGAAGAGCTTGTCCTTCTGCGATAGGCCGTaGAGCAGCAGCACCGTGTCCCGCAGACAGCGCACT +
Preference number: 3 (lower is better)
Translates to: CIMKSLSFCDRP*SSSTVSRRQRT
Trigger: AGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 72 bp ACGTACCTGCTGCTGAGCCTGGAGAGGAGCATGGGGTaGGTGTGTGAGTGCCCAGTGTTAAGATCCGAAGGG +
Preference number: 3 (lower is better)
Translates to: TYLLLSLERSMG*VCECPVLRSEG
Trigger: CCCTTCGGATCTTAACACTGGGCACTCACACACCCACCCCATGCTCCTCTCCAGGCTCAGCAGCAGGTACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR CCA 72 bp CACGCTAGGCAGGGGTGTCTCTGGGCTGAGGCACTTTaGCAGCACTTGGAACACACACTGGAACCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: HARQGCLWAEAL*QHLEHTLEPGQ
Trigger: TTGCCCAGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCTAGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CCA 72 bp CTCAACAGCCAGCAGCACGCTAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAGCACTTGGAACACACA +
Preference number: 3 (lower is better)
Translates to: LNSQQHARQGCL*AEALWQHLEHT
Trigger: TGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCTAGCGTGCTGCTGGCTGTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR TCA 72 bp CTGCCAAGTCCTGCAGGGCCTGGCAGTGTAAGCCGATaGAGAACTGTACAAGGGGGAGGAAATGCACGGCTC +
Preference number: 3 (lower is better)
Translates to: LPSPAGPGSVSR*RTVQGGGNARL
Trigger: GAGCCGTGCATTTCCTCCCCCTTGTACAGTTCTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR GCA 72 bp CTGGAGGGGACTGCCCATACAGGCGAGTGTAGATGCTaGCTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTG +
Preference number: 3 (lower is better)
Translates to: LEGTAHTGECRC*LGYSSSLGRVL
Trigger: CAGAACACGGCCCAAGGAAGAGCTATAGCCTAGGCAGCATCTACACTCGCCTGTATGGGCAGTCCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR GCA 72 bp CCAGGTGCTCCGCTTCTCTTAGCAGCTGCCAAGTCCTaGAGGGCCTGGCAGTGTAAGCCGATGAAGAACTGT +
Preference number: 3 (lower is better)
Translates to: PGAPLLLAAAKS*RAWQCKPMKNC
Trigger: ACAGTTCTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTTGGCAGCTGCTAAGAGAAGCGGAGCACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CCA 72 bp CCGCTTCTCTTAGCAGCTGCCAAGTCCTGCAGGGCCTaGCAGTGTAAGCCGATGAAGAACTGTACAAGGGGG +
Preference number: 3 (lower is better)
Translates to: PLLLAAAKSCRA*QCKPMKNCTRG
Trigger: CCCCCTTGTACAGTTCTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTTGGCAGCTGCTAAGAGAAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CCA 72 bp CACGCTAGGCAGGGGTGTCTCTGGGCTGAGGCACTTTaGCAGCACTTGGAACACACACTGGAACCCTTTGGT +
Preference number: 3 (lower is better)
Translates to: HARQGCLWAEAL*QHLEHTLEPFG
Trigger: ACCAAAGGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCTAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR-3UTR CAA 90 bp CCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACGAGAATTCCTTTTCCTaGTCACTGAGTGCTTGGGTT +
Preference number: 3 (lower is better)
Translates to: PWGSPCPPHCQPLSVQHHENSFS*SLSAWV
Trigger: AACCCAAGCACTCAGTGACAAGGAAAAGGAATTCTC...GTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR TCA 72 bp GCTAGGAGCAGGTTGGCCAGGTTGTCATCAAAACATTaGCGCCCATGCGCTGCCAGCACAGCTGTGCTCAGA +
Preference number: 3 (lower is better)
Translates to: ARSRLARLSSKH*RPCAASTAVLR
Trigger: TCTGAGCACAGCTGTGCTGGCAGCGCATGGGCGTCAATGTTTTGATGACAACCTGGCCAACCTGCTCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR TCA 72 bp ATGAGCATGCTGACCCCCGGCATCACCTGGTCAAACTaGTGCAGGACCTCCACGCAGTGCATCATGAAGAGC +
Preference number: 3 (lower is better)
Translates to: MSMLTPGITWSN*CRTSTQCIMKS
Trigger: GCTCTTCATGATGCACTGCGTGGAGGTCCTGCATCAGTTTGACCAGGTGATGCCGGGGGTCAGCATGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR GCA 72 bp AGTCTGGAGGGGACTGCCCATACAGGCGAGTGTAGATaGTGCCTAGGCTATAGCTCTTCCTTGGGCCGTGTT +
Preference number: 3 (lower is better)
Translates to: SLEGTAHTGECR*CLGYSSSLGRV
Trigger: AACACGGCCCAAGGAAGAGCTATAGCCTAGGCAGCATCTACACTCGCCTGTATGGGCAGTCCCCTCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 72 bp GGCCAGGTGTGCAGTGGTTGTGACAGCAGATGGTCTTaGCTTGGTCCTAGCAGAGGCTGTGACCCCATACAT +
Preference number: 3 (lower is better)
Translates to: GQVCSGCDSRWS*LGPSRGCDPIH
Trigger: ATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGACCATCTGCTGTCACAACCACTGCACACCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 72 bp CTGAGGGAGACTGGATTACTGGATGAGGGGGTGGGCTaGTTGTGTTCACAGTTCTCCCCAATCTTGCGGCTC +
Preference number: 3 (lower is better)
Translates to: LRETGLLDEGVG*LCSQFSPILRL
Trigger: GAGCCGCAAGATTGGGGAGAACTGTGAACACAACCAGCCCACCCCCTCATCCAGTAATCCAGTCTCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR TCA 72 bp GGTCAAACTGATGCAGGACCTCCACGCAGTGCATCATaGAGAGCTTGTCCTTCTGCGATAGGCCGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: GQTDAGPPRSAS*RACPSAIGRAA
Trigger: TGCTGCACGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCACTGCGTGGAGGTCCTGCATCAGTTTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR CCA 72 bp CCACCTCCTTCCCTGCCACACAATGGTTTCTTCCCATaGCCCCAGCCCAAAGCAATGACTCAGGACAATTCC +
Preference number: 3 (lower is better)
Translates to: PPPSLPHNGFFP*PQPKAMTQDNS
Trigger: GGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCATGGGAAGAAACCATTGTGTGGCAGGGAAGGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CCA 72 bp AGGGGTGTCTCTGGGCTGAGGCACTTTGGCAGCACTTaGAACACACACTGGAACCTGGGCAAGAAATCACAG +
Preference number: 3 (lower is better)
Translates to: RGVSGLRHFGST*NTHWNLGKKSQ
Trigger: CTGTGATTTCTTGCCCAGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR TCA 72 bp ATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTaGTGTACATGTACAGCAGCAGCAGGAGGCAGCCTT +
Preference number: 3 (lower is better)
Translates to: IVSPRPLCQAVM*CTCTAAAGGSL
Trigger: AAGGCTGCCTCCTGCTGCTGCTGTACATGTACATCACATCACGGCCTGACAGAGTGGCCTTGGAGACACAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
3UTR-3UTR CAA 90 bp GTGATGTACATGTACAGCAGCAGCAGGAGGCAGCCTTCTGAGTGGGAACAGAGCCTTGTCACTGAGTGCTaGGGTTTTCTCTTGCTCAAG +
Preference number: 3 (lower is better)
Translates to: VMYMYSSSRRQPSEWEQSLVTEC*GFLLLK
Trigger: CTTGAGCAAGAGAAAACCCAAGCACTCAGTGACAAG...GCTCTGTTCCCACTCAGAAGGCTGCCTCCTGCTGCTGCTGTACATGTACATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CAA 90 bp CACCTGGTCAAACTGATGCAGGACCTCCACGCAGTGCATCATGAAGAGCTTGTCGAGCAGCCAGTTTATTaGCTCGTTCACTGGTCTGGA +
Preference number: 3 (lower is better)
Translates to: HLVKLMQDLHAVHHEELVEQPVY*LVHWSG
Trigger: TCCAGACCAGTGAACGAGCAAATAAACTGGCTGCTC...GACAAGCTCTTCATGATGCACTGCGTGGAGGTCCTGCATCAGTTTGACCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CAA 90 bp ACCTCTTGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTAATGATTGGAGCTTTTaGGAGAATTCCTTTTCCTTG +
Preference number: 3 (lower is better)
Translates to: TSCSSWSHCVSKATLSGRNDWSF*ENSFSL
Trigger: CAAGGAAAAGGAATTCTCCAAAAAGCTCCAATCATT...ACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACAAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR-3UTR CAA 90 bp GGATCAAAGGCTGCTTCAGGAGCAGGTTTATCAAAATGGAACCTTGAGTGTTTGTTTCTGGGCCTCTTCTaGTTTTATGGAGTCACCTCT +
Preference number: 3 (lower is better)
Translates to: GSKAASGAGLSKWNLECLFLGLF*FYGVTS
Trigger: AGAGGTGACTCCATAAAACAAGAAGAGGCCCAGAAA...CAAACACTCAAGGTTCCATTTTGATAAACCTGCTCCTGAAGCAGCCTTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
3UTR CCA 72 bp AAACAGAGGGAGCAGCCAGTTTATTTGCTCGTTCACTaGTCTGGAGCTTTGTCCTTAATTCATTCATCTCTG +
Preference number: 3 (lower is better)
Translates to: KQREQPVYLLVH*SGALSLIHSSL
Trigger: CAGAGATGAATGAATTAAGGACAAAGCTCCAGACCAGTGAACGAGCAAATAAACTGGCTGCTCCCTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR TCA 72 bp TGTGATCTTCTCTGTTCCTCTAGAACGGATTCCGTCTaGTGTAGTGAGTCTCGCAAAATTTTAATTTCTCCA +
Preference number: 3 (lower is better)
Translates to: CDLLCSSRTDSV*CSESRKILISP
Trigger: TGGAGAAATTAAAATTTTGCGAGACTCACTACATCAGACGGAATCCGTTCTAGAGGAACAGAGAAGATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR GCA 72 bp TCATTCATCTCTGCATCTTTAAACTGGAGTTCAGACTaGAATGATTGGAGCTTTTTGGAGAATTCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: SFISASLNWSSD*NDWSFLENSFS
Trigger: GGAAAAGGAATTCTCCAAAAAGCTCCAATCATTGCAGTCTGAACTCCAGTTTAAAGATGCAGAGATGAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp GCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTGCTGGCCAGGCCGGAGAACTaGACCAACCGTCCGCGCGCC +
Preference number: 4 (lower is better)
Translates to: AVQQQHRVPQTAHCPPLLARPEN*TNRPRA
Trigger: GGCGCGCGGACGGTTGGTCCAGTTCTCCGGCCTGGC...CAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
3UTR CAA 72 bp GCATGGGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTaGGGTACGTACCTGCTGCTGAGCCTGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AWAPGAGPASPW*GTYLLLSLERS
Trigger: GCTCCTCTCCAGGCTCAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCCCATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320211.10
3UTR CAA 72 bp GCATGGGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTaGGGTACGTACCTGCTGCTGAGCCGTAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AWAPGAGPASPW*GTYLLLSRSRQ
Trigger: CTGCCTGCTACGGCTCAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCCCATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCCGCTCCGCCTCTTGCTaGCTGGCGCGGAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: AVVPDQLPVLHTAGSPCCRSASC*LARRSP
Trigger: CGGGGACCTCCGCGCCAGGCAGCAAGAGGCGGAGCG...GCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CCA 90 bp TCTCGCTGGCTGCAGGGCTGCAGGCCTTCCCCGGAGCCACACACAGGGAGAGCTCCGCCTCTTGCTGCCTaGCGCGGAGGTCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SRWLQGCRPSPEPHTGRAPPLAA*RGGPRH
Trigger: ATGGCGGGGACCTCCGCGCCAGGCAGCAAGAGGCGG...AGCTCTCCCTGTGTGTGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR GCA 90 bp AGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACGCTCCGCCTCTTGCTaGCTGGCGCGGAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SSRSYTLLGAPAAALSCPRSASC*LARRSP
Trigger: CGGGGACCTCCGCGCCAGGCAGCAAGAGGCGGAGCG...TGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR GCA 90 bp GCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGCTCGCTCCGCCTCTTaGTGCCTGGCGCGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: AVVPDQLPVLHTAGSPCCARSAS*CLARRS
Trigger: GGACCTCCGCGCCAGGCAGCAAGAGGCGGAGCGAGC...GCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR GCA 90 bp TCGCTGGCTGCAGGGCTGCAGGCCTTCCCCGGAGCCACACACAGGGAGAGCTTGCCTTGGGGGTCCCCCTaGCCTCCGCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLAAGLQAFPGATHRESLPWGSP*PPHCQP
Trigger: TGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGG...CAAGCTCTCCCTGTGTGTGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCCCGGGGGCAGGGCCTaGGAGCCCATGGTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: LVVVRQQGEELNSQQHARPGGRA*EPMVGY
Trigger: GTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGG...CCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CCA 90 bp ACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCCTGCTGGTCGGTCCTTaGGGGTCCCCCTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: TRAVVPDQLPVLHTAGSPLLVGP*GSPCPP
Trigger: CGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAG...GGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCGCTGGCTGCAGGGCTGCAGGCCTTCCCCGGAGCCACACACAGGGAGAGCTTGCCCGGTCTTACACACTaGTGGGAGCCCCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SLAAGLQAFPGATHRESLPGLTH*WEPLLR
Trigger: CCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGG...CAAGCTCTCCCTGTGTGTGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGCATGGGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTCGTGTTCTGAGGGGCTaGTTGCTCGCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: CMGPGGRACEPMVGYVPARVLRG*LLAPGP
Trigger: AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACG...AGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCCCATGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCAGCCGCGGCCGGACATTaGCTCAGGGCCTGTGACGCG +
Preference number: 4 (lower is better)
Translates to: QTSSRSYTLLGAPAAALSAAAGH*LRACDA
Trigger: CGCGTCACAGGCCCTGAGCCAATGTCCGGCCGCGGC...TGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CCA 90 bp TGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCGGTGCCAGCTGGTCGTaGTCCGCCAGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: WSWSASRERSSTASSTLGGASWS*SASRER
Trigger: CCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACC...GCCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp GAGTCCCCAGGTGCTCCGCTTCTCTTAGCAGCTGCCAAGTCCTGCAGGGCCTGGCTGCTGGTCGGTCCTTaGGGGTCCCCCTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ESPGAPLLLAAAKSCRAWLLVGP*GSPCPP
Trigger: CGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAG...CCAGGCCCTGCAGGACTTGGCAGCTGCTAAGAGAAGCGGAGCACCTGGGGACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp TGCATGGGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTGTGCCACCATGTGGCTaGACACTCAGGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CMGPGGRACEPMVGYVPAVPPCG*TLRASA
Trigger: GGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCAC...AGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCCCATGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTTCCCGCGGCTCTCGCTaGCAGCAGTGGCGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GQWCQTSSRSYTLLGAPASRGSR*QQWREV
Trigger: CACTTCCCGCCACTGCTGCCAGCGAGAGCCGCGGGA...AGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCCAGGTCGTCGGCAGTaGAGTCCCCATGCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: EAFQDPQLWPAGGTMHRGPGRRQ*SPHARR
Trigger: TCGGCGCGCATGGGGACTTCACTGCCGACGACCTGG...GCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp CAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCACCAGGTCGTCGGCAGTaGAGTCCCCATGCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: QTSSRSYTLLGAPAAALSPGRRQ*SPHARR
Trigger: TCGGCGCGCATGGGGACTTCACTGCCGACGACCTGG...TGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp CCTGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGGAGGAATGTGTCGGTaGGTCCCCAGGTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: PAPGGPQRPSKIHSCGLLGGMCR*VPRCSA
Trigger: AGCGGAGCACCTGGGGACTCACCGACACATTCCTCC...CAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCCGCACTGTCCGCCTCTaGTGGTCGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ELRCQLVVVRQQGEELNSRTVRL*WSVLGG
Trigger: ACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCG...GCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp TGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCCCTGCTCGTCAGCCTaGCTGGTCTGTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: WCQTSSRSYTLLGAPAAAPCSSA*LVCPSH
Trigger: GTGAGAGGGACAGACCAGGCAGGCTGACGAGCAGGG...GGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCGCGGCCGGACATTaGCTCAGGGCCTGTGACGCG +
Preference number: 4 (lower is better)
Translates to: QRPSKIHSCGLLVAQCTGAAAGH*LRACDA
Trigger: CGCGTCACAGGCCCTGAGCCAATGTCCGGCCGCGGC...CCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CCA 90 bp GGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGTGCCAGCTGGTCGTaGTCCGCCAGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GPGHHPQPCASLEGTAHTGASWS*SASRER
Trigger: CCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACC...TGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCTCGCTGGCTGCAGGGCTGCAGGCCTTCCCCGGAGCCACACACAGGGAGAGCTGTTGGAGCCAGTGACTaGGGGCAAGGGGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SRWLQGCRPSPEPHTGRAVGASD*GQGALH
Trigger: GTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC...AGCTCTCCCTGTGTGTGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGACTGCTGGTCGGTCCTTaGGGGTCCCCCTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: RTSPSAVCESGGDCPYRRLLVGP*GSPCPP
Trigger: CGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAG...TCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCTTGGCTCAGGGCCTGTaGCGCGAGGGTGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: AVVPDQLPVLHTAGSPCCLAQGL*REGVKL
Trigger: GAGCTTGACACCCTCGCGTCACAGGCCCTGAGCCAA...GCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp TCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCAGCGCAGGAGTGGGAACAGAGCTaGGGTGCCAGCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SLGRVLRGCLLAPGPSAQEWEQS*GASWSW
Trigger: CCACGACCAGCTGGCACCTCAGCTCTGTTCCCACTC...CTGCGCTGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGCTGCGGCCCTTTCATaGCCACCTGTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: CSRGTPEAFQDPQLWPAGAAALS*PPVGPS
Trigger: ACTGGGACCCACAGGTGGGCATGAAAGGGCCGCAGC...ACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACGAGCCAGGCCCGCCCTaGTCGTCAGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: CPPHCQPLSVQHHRERSDEPGPP*SSACLV
Trigger: GACCAGGCAGGCTGACGAGCAGGGCGGGCCTGGCTC...GTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR GCA 90 bp TATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTCGCTGGCTGCAGGGCTaGAGGCCTTCCCCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: YSSSLGRVLRGCLLAPGPRWLQG*RPSPEP
Trigger: TGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCG...AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCCGTGTTCTGAGGGGCTaGTTGCTCGCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVVPDQLPVLHTAGSPCCRVLRG*LLAPGP
Trigger: AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACG...GCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp ATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATCCCAGCCACTCAGCCAGGCCGGAGAACTaGACCAACCGTCCGCGCGCC +
Preference number: 4 (lower is better)
Translates to: MGTGSATARDRKKDPSHSARPEN*TNRPRA
Trigger: GGCGCGCGGACGGTTGGTCCAGTTCTCCGGCCTGGC...TGAGTGGCTGGGATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR CCA 90 bp GGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACCCGCCTCTTGCTGCCTaGCGCGGAGGTCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GRAPSSRQISYHGDGLSNPPLAA*RGGPRH
Trigger: ATGGCGGGGACCTCCGCGCCAGGCAGCAAGAGGCGG...GTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGGGTGCCAGCTGGTCGTaGTCCGCCAGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRGASWS*SASRER
Trigger: CCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACC...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGTGCCACCATGTGGCTaGACACTCAGGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CSRGTPEAFQDPQLWPAGVPPCG*TLRASA
Trigger: GGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCAC...ACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCGGCCAGCCAGTTCTCTaGGCAGTTCCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: WCQTSSRSYTLLGAPAAAGQPVL*AVPAGH
Trigger: GTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCC...GGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp ACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTAGCGTCCCGCGGCTCTCGCTaGCAGCAGTGGCGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TGEAQHSQLCLEQGEVVASRGSR*QQWREV
Trigger: CACTTCCCGCCACTGCTGCCAGCGAGAGCCGCGGGA...CGCTACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCGGGTGGGGGAACCCATaGCCCTCCTGCCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPAGWGNP*PSCPAP
Trigger: TGGCGCAGGGCAGGAGGGCCATGGGTTCCCCCACCC...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR TCA 90 bp CTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGGTCTTGGCTCAGGGCCTGTaGCGCGAGGGTGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LTHCWEPLLRPFHAHLWVLAQGL*REGVKL
Trigger: GAGCTTGACACCCTCGCGTCACAGGCCCTGAGCCAA...GACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp GGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTCAGAGGCTTGTATCCTaGCTCCGTCTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GQWCQTSSRSYTLLGAPAQRLVS*LRLAGV
Trigger: CACCCCTGCCAGACGGAGTCAGGATACAAGCCTCTG...AGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AGGGCTGTGGCTGGCGCCGCAGGAAGGCTAGGAGCAGGTTGGCCAGGTTGTCATGGAGGAATGTGTCGGTaGGTCCCCAGGTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RAVAGAAGRLGAGWPGCHGGMCR*VPRCSA
Trigger: AGCGGAGCACCTGGGGACTCACCGACACATTCCTCC...ATGACAACCTGGCCAACCTGCTCCTAGCCTTCCTGCGGCGCCAGCCACAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GAGTCCCCAGGTGCTCCGCTTCTCTTAGCAGCTGCCAAGTCCTGCAGGGCCTGGGGAGGAATGTGTCGGTaGGTCCCCAGGTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: ESPGAPLLLAAAKSCRAWGGMCR*VPRCSA
Trigger: AGCGGAGCACCTGGGGACTCACCGACACATTCCTCC...CCAGGCCCTGCAGGACTTGGCAGCTGCTAAGAGAAGCGGAGCACCTGGGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp TGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCCAGGAGGCAGCCTTCTaGGTGGGAACAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WSWSASRERSSTASSTLGQEAAF*VGTELR
Trigger: CCTCAGCTCTGTTCCCACTCAGAAGGCTGCCTCCTG...GCCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGAGCAGTGGCGGGAAGTaGAACTTGGCGTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRSSGGK*NLAWAR
Trigger: GCGGGCCCACGCCAAGTTTCACTTCCCGCCACTGCT...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCGGGGGCAAGGGGCTCTaGACACCAAGCTTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSRAHLWTASRHSSVTLGGGKGL*TPSLAR
Trigger: CCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCC...GCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACACCTTGGGGGTCCCCCTaGCCTCCGCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: HSCGLLVAQCTGAIIPVTPWGSP*PPHCQP
Trigger: TGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGG...TGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTGCTGAGAGGACCTCCACGCAGTaGATCATGAAGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GPGGRACEPMVGYVPAAERTSTQ*IMKSLS
Trigger: GGACAAGCTCTTCATGATGCACTGCGTGGAGGTCCT...CTCAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCGCTGCGGCCCTTTCATaGCCACCTGTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: EAFQDPQLWPAGGTMHRGAAALS*PPVGPS
Trigger: ACTGGGACCCACAGGTGGGCATGAAAGGGCCGCAGC...GCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCTCCACAGCTGTGGCCTaGTGGTGGCACAATGCACCG +
Preference number: 4 (lower is better)
Translates to: AVVPDQLPVLHTAGSPCCSTAVA*WWHNAP
Trigger: CGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGA...GCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCCCTGCTCGTCAGCCTaGCTGGTCTGTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: EAFQDPQLWPAGGTMHRGPCSSA*LVCPSH
Trigger: GTGAGAGGGACAGACCAGGCAGGCTGACGAGCAGGG...GCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCGAGCCAGGCCCGCCCTaGTCGTCAGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: EGQASGLHVEKDEGLHGPEPGPP*SSACLV
Trigger: GACCAGGCAGGCTGACGAGCAGGGCGGGCCTGGCTC...GGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGCTGGCTGCAGGGCTaGAGGCCTTCCCCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: EGQASGLHVEKDEGLHGPRWLQG*RPSPEP
Trigger: TGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCG...GGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCCGCTGGCTGCAGGGCTaGAGGCCTTCCCCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SWLGPSRGCDPIHGPDGARWLQG*RPSPEP
Trigger: TGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCG...GGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGTTGACGCCCATGCGCTaGCAGCACAGCTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LVVVRQQGEELNSQQHARLTPMR*QHSCAQ
Trigger: CTGAGCACAGCTGTGCTGGCAGCGCATGGGCGTCAA...CCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR GCA 90 bp CTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCGCGGTCACCATTGTGTaGCACCAGGCACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSRAHLWTASRHSSVTLGAVTIV*HQAPGL
Trigger: CAGCCCTGGTGCCTGGTGGCACACAATGGTGACCGC...GCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: AVVPDQLPVLHTAGSPCCRQGCL*AEALWQ
Trigger: CTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCT...GCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCCTGCTGGTCGGTCCTTaGGGGTCCCCCTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKALLVGP*GSPCPP
Trigger: CGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAG...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGGAGAAACTGTCCGCCTCTGCTaGTCGGTCCTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GTSVDSQQAQLRDLGLGETVRLC*SVLGGP
Trigger: GGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGT...TTCTCCCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCGGAAAGGAGTGGTGCTaGTGCCACCATGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WCQTSSRSYTLLGAPAAAGKEWC*CHHVAG
Trigger: TCCAGCCACATGGTGGCACCAGCACCACTCCTTTCC...GGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp ACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCGGCCAGCCAGTTCTCTaGGCAGTTCCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TRAVVPDQLPVLHTAGSPGQPVL*AVPAGH
Trigger: GTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCC...GGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGAGCAGGGGGAAGTCGTAGCGGTCACCATTGTGTGCCACCAGGCACCAGGGCTGCGGGAAGTGAAACTTaGCGTGGGCCCGCCTACAGG +
Preference number: 4 (lower is better)
Translates to: GAGGSRSGHHCVPPGTRAAGSET*RGPAYR
Trigger: CCTGTAGGCGGGCCCACGCCAAGTTTCACTTCCCGC...AGCCCTGGTGCCTGGTGGCACACAATGGTGACCGCTACGACTTCCCCCTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCGCGGGAAGTGAAACTTaGCGTGGGCCCGCCTACAGG +
Preference number: 4 (lower is better)
Translates to: LSRAHLWTASRHSSVTLGAGSET*RGPAYR
Trigger: CCTGTAGGCGGGCCCACGCCAAGTTTCACTTCCCGC...GCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AGGCAGGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCGGAGGAATGTGTCGGTaGGTCCCCAGGTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RQGRAPSSRQISYHGDGLGGMCR*VPRCSA
Trigger: AGCGGAGCACCTGGGGACTCACCGACACATTCCTCC...GAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTGCTGAGTGTCAGGCCGTGATGTaGTGTACATGTACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPGGRACEPMVGYVPAAECQAVM*CTCTAA
Trigger: TGCTGCTGTACATGTACATCACATCACGGCCTGACA...CTCAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp CACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAAGCAGTGGCGGGAAGTaGAACTTGGCGTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: HSCGLLVAQCTGAIIPVTSSGGK*NLAWAR
Trigger: GCGGGCCCACGCCAAGTTTCACTTCCCGCCACTGCT...TGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCAGTCTCCCTCTTCACATaGCTCGGCCCCTCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: SSRSYTLLGAPAAALSCPVSLFT*LGPSPS
Trigger: ACTAGGGGAGGGGCCGAGTCATGTGAAGAGGGAGAC...TGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR TCA 90 bp GGAGCAGGGGGAAGTCGTAGCGGTCACCATTGTGTGCCACCAGGCACCAGGGCTGTACGTACCTGCTGCTaGGCCTGGAGAGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: GAGGSRSGHHCVPPGTRAVRTCC*AWRGAW
Trigger: CCATGCTCCTCTCCAGGCTCAGCAGCAGGTACGTAC...AGCCCTGGTGCCTGGTGGCACACAATGGTGACCGCTACGACTTCCCCCTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR TCA 90 bp TCTGCGATAGGCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCAATCTGTGGACCTTATaGTCACCTGCCGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SAIGRAAAAPCPADSALSNLWTL*SPAARP
Trigger: CGGCCTGGCGGCAGGTGATCATAAGGTCCACAGATT...GGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp GAAAGGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACGGGGGCAAGGGGCTCTaGACACCAAGCTTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERSGAGATMWLDTQGLSHGGKGL*TPSLAR
Trigger: CCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCC...GTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCTTGGGGGTCCCCCTaGCCTCCGCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQPWGSP*PPHCQP
Trigger: TGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGG...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGCGCACTGTCCGCCTCTaGTGGTCGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPRTVRL*WSVLGG
Trigger: ACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCG...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCAGCGCAGGAGGTCATCCAGGGCTaGCTCTTCACAGTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: SLGRVLRGCLLAPGPSAQEVIQG*LFTVRH
Trigger: GTGACGGACTGTGAAGAGGCAGCCCTGGATGACCTC...CTGCGCTGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGCTGGGAGCCCCTGCTaGGGCCCTTTCATGCCCACC +
Preference number: 4 (lower is better)
Translates to: SWLGPSRGCDPIHGPDGAAGSPC*GPFMPT
Trigger: GGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGC...GGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTCCCGGTCTTACACACTaGTGGGAGCCCCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: YSSSLGRVLRGCLLAPGPPGLTH*WEPLLR
Trigger: CCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGG...AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGAGCCAGGCCCGCCCTaGTCGTCAGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPAEPGPP*SSACLV
Trigger: GACCAGGCAGGCTGACGAGCAGGGCGGGCCTGGCTC...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCGGGGGCAGGGCCTaGGAGCCCATGGTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GEGQASGLHVEKDEGLHGPGGRA*EPMVGY
Trigger: GTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGG...CCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCTGTGATCTCGCTGGCTaGAGGGCTGCAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPQRPSKIHSCGLLVAQCCDLAG*RAAGLP
Trigger: GGGAAGGCCTGCAGCCCTGCAGCCAGCGAGATCACA...GCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGTGTGATCTCGCTGGCTaGAGGGCTGCAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRCDLAG*RAAGLP
Trigger: GGGAAGGCCTGCAGCCCTGCAGCCAGCGAGATCACA...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGCAGGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCACGTGTTCTGAGGGGCTaGTTGCTCGCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GRAGLLPQGRSVTMGTGSRVLRG*LLAPGP
Trigger: AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACG...TGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGGCCTGCTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGCAGCTGTCACCCTCAGCCGTGTaGGAGTCTGGAGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: WPAGGTMHRGHHTSDRQLSPSAV*ESGGDC
Trigger: GCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGA...CAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCAGGACCTTATGATCACTaGACACGTCCCGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SSRSYTLLGAPAAALSCPGPYDH*TRPEPR
Trigger: CCGCGGCTCGGGACGTGTCCAGTGATCATAAGGTCC...TGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CCA 90 bp TGCATGGGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTTTCCTAGGACTGACATaGGAAACAGAGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CMGPGGRACEPMVGYVPAFLGLT*ETEGAA
Trigger: GGCTGCTCCCTCTGTTTCCCATGTCAGTCCTAGGAA...AGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCCCATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATATCCTGACTCCGTCTaGCAGGGGTGGGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: QTSSRSYTLLGAPAAALSYPDSV*QGWGRD
Trigger: GTCCCTTCCCCACCCCTGCCAGACGGAGTCAGGATA...TGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCCAGTGACTGGGGGCAAGGGGCTCTGCACACCAAGCTTAGCCAGGAGCCACACACGGCTCCAGGAAGCTaGCAGAGTGGGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: ASDWGQGALHTKLSQEPHTAPGS*QSGKAL
Trigger: AAGGGCCTTCCCACTCTGCCAGCTTCCTGGAGCCGT...GTGTGGCTCCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp TTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACACTGCTGGTCGGTCCTTaGGGGTCCCCCTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: FLKADQLPWGRAQQQPGTLLVGP*GSPCPP
Trigger: CGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAG...TGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGCAGCACGCTAGGCAGGGGTGTCTCTGGGCTGAGGCACTTTGGCAGCACTTGGGTGCCACCATGTGGCTaGACACTCAGGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSTLGRGVSGLRHFGSTWVPPCG*TLRASA
Trigger: GGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCAC...CCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCTAGCGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp GGCAGGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCTCGTCAGCCTGCCTaGTCTGTCCCTCTCACCACC +
Preference number: 4 (lower is better)
Translates to: GRAGLLPQGRSVTMGTGSARQPA*SVPLTT
Trigger: GGTGGTGAGAGGGACAGACCAGGCAGGCTGACGAGC...TGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCTCGTCAGCCTGCCTaGTCTGTCCCTCTCACCACC +
Preference number: 4 (lower is better)
Translates to: QRPSKIHSCGLLVAQCTGARQPA*SVPLTT
Trigger: GGTGGTGAGAGGGACAGACCAGGCAGGCTGACGAGC...CCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGTGTAGATGCTGCCGCTCGTCAGCCTGCCTaGTCTGTCCCTCTCACCACC +
Preference number: 4 (lower is better)
Translates to: SRVRVWRGLPIQASVDAAARQPA*SVPLTT
Trigger: GGTGGTGAGAGGGACAGACCAGGCAGGCTGACGAGC...GGCAGCATCTACACTCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACATCTCGCTGGCAGCAGTaGCGGGAAGTGAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: RGTPEAFQDPQLWPAGGTSRWQQ*REVKLG
Trigger: GCCAAGTTTCACTTCCCGCCACTGCTGCCAGCGAGA...TGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTTCTCGCTGGCAGCAGTaGCGGGAAGTGAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: CSRGTPEAFQDPQLWPAGSRWQQ*REVKLG
Trigger: GCCAAGTTTCACTTCCCGCCACTGCTGCCAGCGAGA...ACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGTCCCGCGGCTCTCGCTaGCAGCAGTGGCGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LGTPALSKAGTSVPGCGQSRGSR*QQWREV
Trigger: CACTTCCCGCCACTGCTGCCAGCGAGAGCCGCGGGA...CTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp CCGCCTCTGCTGGTCGGTCCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCAAGAACGGATTCCGTCTaGTGTAGTGAGTCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: PPLLVGPWGSPCPPHCQPRTDSV*CSESRK
Trigger: TTTGCGAGACTCACTACATCAGACGGAATCCGTTCT...TGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp TCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCAGCGCAGAAGAACCTGTGGTCCTaGGGCCTGACATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLGRVLRGCLLAPGPSAQKNLWS*GLTFQP
Trigger: TGGCTGGAATGTCAGGCCTCAGGACCACAGGTTCTT...CTGCGCTGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCTGGGTCTCCATCACGTaGGCACTCATTCCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: EAFQDPQLWPAGGTMHRGWVSIT*ALIPGN
Trigger: GTTGCCCGGAATGAGTGCTCACGTGATGGAGACCCA...GCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TGCATGGGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTCACTCTGTCAGGCCGTaGTGTGATGTACATGTACAG +
Preference number: 4 (lower is better)
Translates to: CMGPGGRACEPMVGYVPAHSVRP*CDVHVQ
Trigger: CTGTACATGTACATCACATCACGGCCTGACAGAGTG...AGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCCCATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGAGCAGTGGCGGGAAGTaGAACTTGGCGTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRSSGGK*NLAWAR
Trigger: GCGGGCCCACGCCAAGTTTCACTTCCCGCCACTGCT...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CCTCTGCTGGTCGGTCCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGGCTTACTATCCTCTCTaGCCACCAGAGGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: PLLVGPWGSPCPPHCQPLAYYPL*PPEACI
Trigger: GATACAAGCCTCTGGTGGGCAGAGAGGATAGTAAGC...CAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp GTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTCCTTGGGGGTCCCCCTaGCCTCCGCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VLHWRKILGTPALSKAGTPWGSP*PPHCQP
Trigger: TGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGG...AGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTAAGAGCTTGTCCTTCTaGGATAGGCCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSRGTPEAFQDPQLWPAGKSLSF*DRPCSS
Trigger: GCTGCTGCACGGCCTATCGCAGAAGGACAAGCTCTT...ACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCTGCGATAGGCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCAAGAGCTTGTCCTTCTaGGATAGGCCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SAIGRAAAAPCPADSALSKSLSF*DRPCSS
Trigger: GCTGCTGCACGGCCTATCGCAGAAGGACAAGCTCTT...GGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp TGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCAGCCACCTCCTTCCCTaGCACACAATGGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WCQTSSRSYTLLGAPAAASHLLP*HTMVSS
Trigger: GGAAGAAACCATTGTGTGGCAGGGAAGGAGGTGGCT...GGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGGCTGGGAGCCCCTGCTaGGGCCCTTTCATGCCCACC +
Preference number: 4 (lower is better)
Translates to: GEGQASGLHVEKDEGLHGAGSPC*GPFMPT
Trigger: GGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGC...CCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGGCCAGGTTGTCATCAAAACATTGACGCCCATGCGCTGCCAGCACAGCTGTGCGCTGGGAGCCCCTGCTaGGGCCCTTTCATGCCCACC +
Preference number: 4 (lower is better)
Translates to: WPGCHQNIDAHALPAQLCAGSPC*GPFMPT
Trigger: GGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGC...GCACAGCTGTGCTGGCAGCGCATGGGCGTCAATGTTTTGATGACAACCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGACTGCTGGGAGCCCCTaGTGCGGCCCTTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: LGTPALSKAGTSVPGCGQTAGSP*CGPFMP
Trigger: GGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGT...CTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGCCCGGTCTTACACACTaGTGGGAGCCCCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LGTPALSKAGTSVPGCGQPGLTH*WEPLLR
Trigger: CCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGG...CTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCTGCTGGTGGCACAATaGACCGGGGCCATCATACCA +
Preference number: 4 (lower is better)
Translates to: EAFQDPQLWPAGGTMHRGLLVAQ*TGAIIP
Trigger: TGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAG...GCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGTTCCCTGCACAATCCTaGCCTGTCTGCGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLTHCWEPLLRPFHAHLWFPAQS*PVCELQ
Trigger: CTGGAGCTCGCAGACAGGGCAGGATTGTGCAGGGAA...CCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR GCA 90 bp AGCATCCACCCACCGCAGCAGGGCCTGTGGTCTCCACTGACAGATGCTGAGCAGTTGACGCCCATGCGCTaGCAGCACAGCTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SIHPPQQGLWSPLTDAEQLTPMR*QHSCAQ
Trigger: CTGAGCACAGCTGTGCTGGCAGCGCATGGGCGTCAA...CTGCTCAGCATCTGTCAGTGGAGACCACAGGCCCTGCTGCGGTGGGTGGATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAAGCGGTCACCATTGTGTaGCACCAGGCACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQGSFLKADQLPWGRAQQAVTIV*HQAPGL
Trigger: CAGCCCTGGTGCCTGGTGGCACACAATGGTGACCGC...TTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCACCCTCAGCCGTGTaGGAGTCTGGAGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: YSSSLGRVLRGCLLAPGPSPSAV*ESGGDC
Trigger: GCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGA...AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp ACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCGGTTGTGGCCAGGTGTaGAGTGGTTGTGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: TRAVVPDQLPVLHTAGSPGCGQV*SGCDSR
Trigger: TCTGCTGTCACAACCACTGCACACCTGGCCACAACC...GGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACCACCGCGGGAAGTGAAACTTaGCGTGGGCCCGCCTACAGG +
Preference number: 4 (lower is better)
Translates to: LRTVSHCLCNITVSALTTAGSET*RGPAYR
Trigger: CCTGTAGGCGGGCCCACGCCAAGTTTCACTTCCCGC...GGTGGTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR TCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGTGGGTCTCCATCACGTaGGCACTCATTCCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRWVSIT*ALIPGN
Trigger: GTTGCCCGGAATGAGTGCTCACGTGATGGAGACCCA...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AGGCAGGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCTGGGTCTCCATCACGTaGGCACTCATTCCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: RQGRAPSSRQISYHGDGLWVSIT*ALIPGN
Trigger: GTTGCCCGGAATGAGTGCTCACGTGATGGAGACCCA...GAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp CCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGGAGGAATGTGTCGGTaGGTCCCCAGGTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: PAPPLPLRQTDQTQETRPGGMCR*VPRCSA
Trigger: AGCGGAGCACCTGGGGACTCACCGACACATTCCTCC...TGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCATTCCAGGATGCACACTaGGTCCTCAGGGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSRSYTLLGAPAAALSCPFQDAH*VLRVGL
Trigger: GAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAA...TGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR TCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCCAGGAGGCAGCCTTCTaGGTGGGAACAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPAQEAAF*VGTELR
Trigger: CCTCAGCTCTGTTCCCACTCAGAAGGCTGCCTCCTG...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp CTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCGCACATTCGACTGTCTaGGAGGGTCTCCCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSRAHLWTASRHSSVTLGAHSTV*EGLPLH
Trigger: GTGAAGAGGGAGACCCTCTCAGACAGTCGAATGTGC...GCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR TCA 90 bp GGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACACATGGGGTGGGTGTGTaGGTGCCCAGTGTTAAGATC +
Preference number: 4 (lower is better)
Translates to: GPGHHPQPCASLEGTAHTHGVGV*VPSVKI
Trigger: GATCTTAACACTGGGCACTCACACACCCACCCCATG...TGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR GCA 90 bp TCGCTGGCTGCAGGGCTGCAGGCCTTCCCCGGAGCCACACACAGGGAGAGCTTGGCTTACTATCCTCTCTaGCCACCAGAGGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: SLAAGLQAFPGATHRESLAYYPL*PPEACI
Trigger: GATACAAGCCTCTGGTGGGCAGAGAGGATAGTAAGC...CAAGCTCTCCCTGTGTGTGGCTCCGGGGAAGGCCTGCAGCCCTGCAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp AGCACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTAGCAGCTGCCAAGTCCTaGAGGGCCTGGCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: STGEAQHSQLCLEQGEVVAAAKS*RAWQCK
Trigger: CTTACACTGCCAGGCCCTGCAGGACTTGGCAGCTGC...TACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTAGAAGCCTTCCAGGATaGACACTGAGTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CSRGTPEAFQDPQLWPAGRSLPG*TLSPQG
Trigger: ACCCTGAGGACTCAGTGTGCATCCTGGAAGGCTTCT...ACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR GCA 90 bp GGAACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAGAAGCCTTCCAGGATaGACACTGAGTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GTELRCQLVVVRQQGEELRSLPG*TLSPQG
Trigger: ACCCTGAGGACTCAGTGTGCATCCTGGAAGGCTTCT...GAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGGGGGGCAAGGGGCTCTaGACACCAAGCTTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRGGKGL*TPSLAR
Trigger: CCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCC...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CCAGGGTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGGGGCAAGGGGCTCTaGACACCAAGCTTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSFTGGRSLVPLLSPRLGGKGL*TPSLAR
Trigger: CCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCC...CAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGACCCTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGTCAGCCACTGTCTGTaGAACATCACCGTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GPGHHPQPCASLEGTAHTVSHCL*NITVSA
Trigger: AGCGCTCACGGTGATGTTGCACAGACAGTGGCTGAC...TGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACACTCGTCAGCCACTGTCTGTaGAACATCACCGTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GVVLVPPCGWTLRASATLVSHCL*NITVSA
Trigger: AGCGCTCACGGTGATGTTGCACAGACAGTGGCTGAC...GAGTGTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp TGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGCGCACTGTCCGCCTCTaGTGGTCGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: CSSWSHCVSKATLSGRDVRTVRL*WSVLGG
Trigger: ACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCG...CACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp CTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGCAGCTGGAAGGACTTCTGCGATAGGCCGTaGAGCAGCAGCACCGTGTCC +
Preference number: 4 (lower is better)
Translates to: LVAQCTGAIIPVTGSWKDFCDRP*SSSTVS
Trigger: GGACACGGTGCTGCTGCTGCACGGCCTATCGCAGAA...GTCCTTCCAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTAGGACCTCCACGCAGTaGATCATGAAGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GQWCQTSSRSYTLLGAPARTSTQ*IMKSLS
Trigger: GGACAAGCTCTTCATGATGCACTGCGTGGAGGTCCT...AGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCTTCCGCTGCGGCCCTTTCATaGCCACCTGTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PAQSNDSGQFHRQGRAPSAAALS*PPVGPS
Trigger: ACTGGGACCCACAGGTGGGCATGAAAGGGCCGCAGC...GGAAGGAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAACTGCTGGGAGCCCCTaGTGCGGCCCTTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPATAGSP*CGPFMP
Trigger: GGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGT...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAATCCACAGCTGTGGCCTaGTGGTGGCACAATGCACCG +
Preference number: 4 (lower is better)
Translates to: GQGSFLKADQLPWGRAQQSTAVA*WWHNAP
Trigger: CGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGA...TTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp AGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGACAGCATAGCCAGCTCTaGTTGGAGCAGGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RTSPSAVCESGGDCPYRRQHSQL*LEQGEV
Trigger: GACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTG...TCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GTCTTCCACATCGGTTTCCGCGGCACAGAGGTCATCCAGGGCTGCCTCTTCACATCACCCTCAGCCGTGTaGGAGTCTGGAGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: VFHIGFRGTEVIQGCLFTSPSAV*ESGGDC
Trigger: GCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGA...TGTGAAGAGGCAGCCCTGGATGACCTCTGTGCCGCGGAAACCGATGTGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CCA 90 bp GGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACGGACCTTATGATCACTaGACACGTCCCGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GRAPSSRQISYHGDGLSNGPYDH*TRPEPR
Trigger: CCGCGGCTCGGGACGTGTCCAGTGATCATAAGGTCC...GTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CCA 90 bp TGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACTATCCTGACTCCGTCTaGCAGGGGTGGGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: CPPHCQPLSVQHHRERSDYPDSV*QGWGRD
Trigger: GTCCCTTCCCCACCCCTGCCAGACGGAGTCAGGATA...GTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGACGGCTCCAGGAAGCTaGCAGAGTGGGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPTAPGS*QSGKAL
Trigger: AAGGGCCTTCCCACTCTGCCAGCTTCCTGGAGCCGT...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGAACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCTGGGCTGAGGCACTTTaGCAGCACTTGGAACACACA +
Preference number: 4 (lower is better)
Translates to: GTELRCQLVVVRQQGEELWAEAL*QHLEHT
Trigger: TGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCA...GAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPRQGCL*AEALWQ
Trigger: CTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCT...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGGTTGGAGCCAGTGACTaGGGGCAAGGGGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRVGASD*GQGALH
Trigger: GTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGACTGTCCGCCTCTGCTaGTCGGTCCTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GEGQASGLHVEKDEGLHGTVRLC*SVLGGP
Trigger: GGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGT...CCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTACTGTCCGCCTCTGCTaGTCGGTCCTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: VLHWRKILGTPALSKAGTTVRLC*SVLGGP
Trigger: GGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGT...AGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGGTGCCACCATGTGGCTaGACACTCAGGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQVPPCG*TLRASA
Trigger: GGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCAC...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCGCTGGTGCCACCATGTaGCTGGACACTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAAGATM*LDTQGL
Trigger: GAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGC...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGGCTGGTGCCACCATGTaGCTGGACACTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRAGATM*LDTQGL
Trigger: GAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGC...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AAGCCCTCGGATGAGCATGCTGACCCCCGGCATCACCTGGTCAAACTGATGCAGGCTGGTGCCACCATGTaGCTGGACACTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KPSDEHADPRHHLVKLMQAGATM*LDTQGL
Trigger: GAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGC...CTGCATCAGTTTGACCAGGTGATGCCGGGGGTCAGCATGCTCATCCGAGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp CCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCTTCCAGTGCCCCCTTAGTCTaGGGTGGGGGAACCCATGGC +
Preference number: 4 (lower is better)
Translates to: PAQSNDSGQFHRQGRAPSSAPLV*GGGTHG
Trigger: GCCATGGGTTCCCCCACCCCAGACTAAGGGGGCACT...GGAAGGAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR CCA 90 bp CTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGCCTGGAGAGGAGCATaGGGTGGGTGTGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LGYSSSLGRVLRGCLLAPAWRGA*GGCVSA
Trigger: GGCACTCACACACCCACCCCATGCTCCTCTCCAGGC...TGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR CCA 90 bp CCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCGAAAAGGCAGTGCTaGCCGCGAGGTTCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: PAPPLPLRQTDQTQETRPAKRQC*PRGSEA
Trigger: GGCTTCGGAACCTCGCGGCCAGCACTGCCTTTTCGC...TGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR TCA 90 bp CGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAAATCTGTGGACCTTATaGTCACTGGACACGTCCCGA +
Preference number: 4 (lower is better)
Translates to: RGTPEAFQDPQLWPAGGTNLWTL*SLDTSR
Trigger: TCGGGACGTGTCCAGTGATCATAAGGTCCACAGATT...TGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCAGAGGCTTGTATCCTaGCTCCGTCTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQQRLVS*LRLAGV
Trigger: CACCCCTGCCAGACGGAGTCAGGATACAAGCCTCTG...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TCTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCCAGAGGCTTGTATCCTaGCTCCGTCTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SWLGPSRGCDPIHGPDGAQRLVS*LRLAGV
Trigger: CACCCCTGCCAGACGGAGTCAGGATACAAGCCTCTG...GGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AAGCCCTCGGATGAGCATGCTGACCCCCGGCATCACCTGGTCAAACTGATGCAGCAGAGGCTTGTATCCTaGCTCCGTCTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KPSDEHADPRHHLVKLMQQRLVS*LRLAGV
Trigger: CACCCCTGCCAGACGGAGTCAGGATACAAGCCTCTG...CTGCATCAGTTTGACCAGGTGATGCCGGGGGTCAGCATGCTCATCCGAGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp TGGCCTGCTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGCAGCTGTGTGGTCCTGAGGCCTaGCATTCCAGCCAAGGTACT +
Preference number: 4 (lower is better)
Translates to: WPAGGTMHRGHHTSDRQLCGPEA*HSSQGT
Trigger: AGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACA...CAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AGGCAGGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCTGTGGTCCTGAGGCCTaGCATTCCAGCCAAGGTACT +
Preference number: 4 (lower is better)
Translates to: RQGRAPSSRQISYHGDGLCGPEA*HSSQGT
Trigger: AGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACA...GAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GAAAGGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACTGTGGTCCTGAGGCCTaGCATTCCAGCCAAGGTACT +
Preference number: 4 (lower is better)
Translates to: ERSGAGATMWLDTQGLSHCGPEA*HSSQGT
Trigger: AGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACA...GTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp AGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGTGTAGATGCTGCCAAGAACCTGTGGTCCTaGGGCCTGACATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRVRVWRGLPIQASVDAAKNLWS*GLTFQP
Trigger: TGGCTGGAATGTCAGGCCTCAGGACCACAGGTTCTT...GGCAGCATCTACACTCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGTGGCACACCAGGTGCTaGAGAATGCTAAGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GLTHCWEPLLRPFHAHLWWHTRC*RMLSAV
Trigger: GACTGCACTTAGCATTCTTCAGCACCTGGTGTGCCA...CCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR TCA 90 bp TCTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCCAGGAGGCAGCCTTCTaGGTGGGAACAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SWLGPSRGCDPIHGPDGAQEAAF*VGTELR
Trigger: CCTCAGCTCTGTTCCCACTCAGAAGGCTGCCTCCTG...GGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCTGTCAGGCCGTGATGTaGTGTACATGTACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ELRCQLVVVRQQGEELNSCQAVM*CTCTAA
Trigger: TGCTGCTGTACATGTACATCACATCACGGCCTGACA...GCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp CCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACTCTGTCAGGCCGTaGTGTGATGTACATGTACAG +
Preference number: 4 (lower is better)
Translates to: PAPGLTHCWEPLLRPFHAHSVRP*CDVHVQ
Trigger: CTGTACATGTACATCACATCACGGCCTGACAGAGTG...GGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGGGGATCTGGCGCGGTTaGCAACTCCCTCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQGIWRG*QLPPSK
Trigger: TTTGCTCGGAGGGAGTTGTCAACCGCGCCAGATCCC...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR GCA 90 bp GTGTGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCACGAGCTAGACTTGCCTaGCGCCAGGCCGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: VWPGIVHTVWLLPRSGWPRARLA*RQAGEL
Trigger: CAGTTCTCCGGCCTGGCGGCAGGCAAGTCTAGCTCG...TGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR GCA 90 bp TGGCCAGGTTGTCATCAAAACATTGACGCCCATGCGCTGCCAGCACAGCTGTGCCGGAGGTCCCCGCCATaGTTTCCGCTCACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: WPGCHQNIDAHALPAQLCRRSPP*FPLTPS
Trigger: ACTTGGGGTGAGCGGAAAGCATGGCGGGGACCTCCG...GCACAGCTGTGCTGGCAGCGCATGGGCGTCAATGTTTTGATGACAACCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR GCA 90 bp GGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGGAGAAGTCAGCCACTGTCTGTaGAACATCACCGTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GTSVDSQQAQLRDLGLGEVSHCL*NITVSA
Trigger: AGCGCTCACGGTGATGTTGCACAGACAGTGGCTGAC...TTCTCCCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp ACCAGATTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCTCTCAGGGCTGAGAGGCCTTGGGGGTCCCCCTaGCCTCCGCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TRFSPVNARFCASLRAERPWGSP*PPHCQP
Trigger: TGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGG...CCTCTCAGCCCTGAGAGAAGCACAGAACCTGGCATTCACTGGACTGAATCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp CCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCTTCCTTCTGCGATAGGCCGTaGAGCAGCAGCACCGTGTCC +
Preference number: 4 (lower is better)
Translates to: PAQSNDSGQFHRQGRAPSFCDRP*SSSTVS
Trigger: GGACACGGTGCTGCTGCTGCACGGCCTATCGCAGAA...GGAAGGAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CCAGCAGCAGAATCTGCCCCCACTCCTGACAGTAATAGGGAGACGACTGCTCCGTTCTGCGATAGGCCGTaGAGCAGCAGCACCGTGTCC +
Preference number: 4 (lower is better)
Translates to: PAAESAPTPDSNRETTAPFCDRP*SSSTVS
Trigger: GGACACGGTGCTGCTGCTGCACGGCCTATCGCAGAA...CGGAGCAGTCGTCTCCCTATTACTGTCAGGAGTGGGGGCAGATTCTGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp GGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGGAGAAAAGAGCTTGTCCTTCTaGGATAGGCCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GTSVDSQQAQLRDLGLGEKSLSF*DRPCSS
Trigger: GCTGCTGCACGGCCTATCGCAGAAGGACAAGCTCTT...TTCTCCCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp ATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATCCCAGCCACTCAGAGGTCATCCAGGGCTaGCTCTTCACAGTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: MGTGSATARDRKKDPSHSEVIQG*LFTVRH
Trigger: GTGACGGACTGTGAAGAGGCAGCCCTGGATGACCTC...TGAGTGGCTGGGATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACCTGCTGGTGGCACAATaGACCGGGGCCATCATACCA +
Preference number: 4 (lower is better)
Translates to: GRAPSSRQISYHGDGLSNLLVAQ*TGAIIP
Trigger: TGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAG...GTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGTCCACAGCTGTGGCCTaGTGGTGGCACAATGCACCG +
Preference number: 4 (lower is better)
Translates to: LGTPALSKAGTSVPGCGQSTAVA*WWHNAP
Trigger: CGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGA...CTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATATGGCCCTCCTGCCCTaGGCCATCCCATTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSVTMGTGSATARDRKKDMALLP*AIPLWG
Trigger: CCCCCACAATGGGATGGCGCAGGGCAGGAGGGCCAT...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR GCA 90 bp CTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCGGGTGGGTGTGTGAGTaGCCAGTGTTAAGATCCGAA +
Preference number: 4 (lower is better)
Translates to: LSRAHLWTASRHSSVTLGGWVCE*PVLRSE
Trigger: TTCGGATCTTAACACTGGGCACTCACACACCCACCC...GCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR GCA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGCAGCATAGCCAGCTCTaGTTGGAGCAGGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPQHSQL*LEQGEV
Trigger: GACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTG...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCTCCCATGCTCACACTaGCCAAGGGAGACAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRLPCSH*PRETVG
Trigger: GCCCACTGTCTCCCTTGGGCAGTGTGAGCATGGGAG...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR GCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGGTCTGGCTCCTCCCATaGTCACACTGCCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRVWLLP*SHCPRE
Trigger: CTCCCTTGGGCAGTGTGAGCATGGGAGGAGCCAGAC...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR CCA 90 bp CCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACTTCCTAGGACTGACATaGGAAACAGAGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PWGSPCPPHCQPLSVQHHFLGLT*ETEGAA
Trigger: GGCTGCTCCCTCTGTTTCCCATGTCAGTCCTAGGAA...GTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp CCAGGGTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGTATCCTGACTCCGTCTaGCAGGGGTGGGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: PGSFTGGRSLVPLLSPRLYPDSV*QGWGRD
Trigger: GTCCCTTCCCCACCCCTGCCAGACGGAGTCAGGATA...CAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGACCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGGTGTGCAGTGGTTATCCTGACTCCGTCTaGCAGGGGTGGGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: ALSKAGTSVPGCGQVCSGYPDSV*QGWGRD
Trigger: GTCCCTTCCCCACCCCTGCCAGACGGAGTCAGGATA...ACCACTGCACACCTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCTCACCTCTCAGACTGTaGGGCTTACTATCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AVVPDQLPVLHTAGSPCCSPLRL*GLLSSL
Trigger: CAGAGAGGATAGTAAGCCCCACAGTCTGAGAGGTGA...GCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGAGGAAGCTGGCAGAGTaGGAAGGCCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQRKLAE*EGPSAS
Trigger: GGAGGCAGAAGGGCCTTCCCACTCTGCCAGCTTCCT...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACAGAGGAAGCTGGCAGAGTaGGAAGGCCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QGSFLKADQLPWGRAQQQRKLAE*EGPSAS
Trigger: GGAGGCAGAAGGGCCTTCCCACTCTGCCAGCTTCCT...CTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGAGGAAGCTGGCAGAGTaGGAAGGCCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRRKLAE*EGPSAS
Trigger: GGAGGCAGAAGGGCCTTCCCACTCTGCCAGCTTCCT...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGCATCCACCCACCGCAGCAGGGCCTGTGGTCTCCACTGACAGATGCTGAGCAGAAGTCCTGCAGGGCCTaGCAGTGTAAGCCGATGAAG +
Preference number: 4 (lower is better)
Translates to: SIHPPQQGLWSPLTDAEQKSCRA*QCKPMK
Trigger: CTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTT...CTGCTCAGCATCTGTCAGTGGAGACCACAGGCCCTGCTGCGGTGGGTGGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCCAGTGACTGGGGGCAAGGGGCTCTGCACACCAAGCTTAGCCAGGAGCCACACACTGGGTCAGGACACTaGCTTGAAGGTGACCTGTTG +
Preference number: 4 (lower is better)
Translates to: ASDWGQGALHTKLSQEPHTGSGH*LEGDLL
Trigger: CAACAGGTCACCTTCAAGCCAGTGTCCTGACCCAGT...GTGTGGCTCCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp GGGAACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCACTTTGGCAGCACTTaGAACACACACTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: GNRAEVPAGRGPPAGRGAHFGST*NTHWNL
Trigger: CAGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTG...AGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp AGGGCTGTGGCTGGCGCCGCAGGAAGGCTAGGAGCAGGTTGGCCAGGTTGTCATTGGGCTGAGGCACTTTaGCAGCACTTGGAACACACA +
Preference number: 4 (lower is better)
Translates to: RAVAGAAGRLGAGWPGCHWAEAL*QHLEHT
Trigger: TGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCA...ATGACAACCTGGCCAACCTGCTCCTAGCCTTCCTGCGGCGCCAGCCACAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGGTCTGGGCTGAGGCACTTTaGCAGCACTTGGAACACACA +
Preference number: 4 (lower is better)
Translates to: LTHCWEPLLRPFHAHLWVWAEAL*QHLEHT
Trigger: TGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCA...GACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACAGAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QGSFLKADQLPWGRAQQQRQGCL*AEALWQ
Trigger: CTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCT...CTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAGGTGCCAGCTGGTCGTaGTCCGCCAGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALGASWS*SASRER
Trigger: CCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACC...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCAGACTGTGGGGCTTACTATCCTCTCTGCCCACCAGAGGCTTGTATCCTGACTGGTGCCAGCTGGTCGTaGTCCGCCAGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SDCGAYYPLCPPEACILTGASWS*SASRER
Trigger: CCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACC...AGTCAGGATACAAGCCTCTGGTGGGCAGAGAGGATAGTAAGCCCCACAGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp GGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTACCTCTTGTTCCAGCTaGAGCCATTGTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GQWCQTSSRSYTLLGAPATSCSS*SHCVSK
Trigger: CTTGGAGACACAATGGCTCCAGCTGGAACAAGAGGT...AGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTGTTGGAGCCAGTGACTaGGGGCAAGGGGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: VLHWRKILGTPALSKAGTVGASD*GQGALH
Trigger: GTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC...AGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGGTTGGAGCCAGTGACTaGGGGCAAGGGGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: CSSWSHCVSKATLSGRDVVGASD*GQGALH
Trigger: GTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC...CACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp TGGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCGGAAAGGAGTGGTGCTaGTGCCACCATGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WPQPKAMTQDNSTGRAGLGKEWC*CHHVAG
Trigger: TCCAGCCACATGGTGGCACCAGCACCACTCCTTTCC...GAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGGGCCAGCCAGTTCTCTaGGCAGTTCCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQGQPVL*AVPAGH
Trigger: GTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCC...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp ACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTAGCGGCAGATCAGTTACCATaGGGACGGGCTCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: TGEAQHSQLCLEQGEVVAADQLP*GRAQQQ
Trigger: CTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGC...CGCTACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTTCTCGCTGGCAGCAGTaGCGGGAAGTGAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: YSSSLGRVLRGCLLAPGPSRWQQ*REVKLG
Trigger: GCCAAGTTTCACTTCCCGCCACTGCTGCCAGCGAGA...AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACACTCCAGATGAGGGGGTGGGCTaGTTGTGTTCACAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SGAGATMWLDTQGLSHTPDEGVG*LCSQFS
Trigger: GGAGAACTGTGAACACAACCAGCCCACCCCCTCATC...TGGAGTGTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR CAA 72 bp GGCGAGTGTAGATGCTGCCTAGGCTATAGCTCTTCCTaGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GECRCCLGYSSS*GRVLRGCLLAP
Trigger: TGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAGGCAGCATCTACACTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCCTTTTCCTTGTCACTaGGTGCTTGGGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: WCQTSSRSYTLLGAPAAAPFPCH*VLGFSL
Trigger: AAGAGAAAACCCAAGCACTCAGTGACAAGGAAAAGG...GGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp TGGCCAGGTTGTCATCAAAACATTGACGCCCATGCGCTGCCAGCACAGCTGTGCCAGAGGCTTGTATCCTaGCTCCGTCTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: WPGCHQNIDAHALPAQLCQRLVS*LRLAGV
Trigger: CACCCCTGCCAGACGGAGTCAGGATACAAGCCTCTG...GCACAGCTGTGCTGGCAGCGCATGGGCGTCAATGTTTTGATGACAACCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCTGTGGTCCTGAGGCCTaGCATTCCAGCCAAGGTACT +
Preference number: 4 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCCGPEA*HSSQGT
Trigger: AGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACA...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR TCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAAGAACCTGTGGTCCTaGGGCCTGACATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPAKNLWS*GLTFQP
Trigger: TGGCTGGAATGTCAGGCCTCAGGACCACAGGTTCTT...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCAAGAACCTGTGGTCCTaGGGCCTGACATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCKNLWS*GLTFQP
Trigger: TGGCTGGAATGTCAGGCCTCAGGACCACAGGTTCTT...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR TCA 90 bp CAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCACCAGATTCAGTCCAGTaGATGCCAGGTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: QTSSRSYTLLGAPAAALSPDSVQ*MPGSVL
Trigger: AAGCACAGAACCTGGCATTCACTGGACTGAATCTGG...TGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACACTCCCAGATTCAGTCCAGTaGATGCCAGGTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GVVLVPPCGWTLRASATLPDSVQ*MPGSVL
Trigger: AAGCACAGAACCTGGCATTCACTGGACTGAATCTGG...GAGTGTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp GAAAGGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACGGCAGTGTAAGCCGATaGAGAACTGTACAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ERSGAGATMWLDTQGLSHGSVSR*RTVQGG
Trigger: TCCCCCTTGTACAGTTCTTCATCGGCTTACACTGCC...GTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCTTCCAGGATGCACACTaGGTCCTCAGGGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPAFQDAH*VLRVGL
Trigger: GAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAA...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR TCA 90 bp AGCATCCACCCACCGCAGCAGGGCCTGTGGTCTCCACTGACAGATGCTGAGCAGCCATCACTAAGCCTGTaGACCAGGCTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SIHPPQQGLWSPLTDAEQPSLSL*TRLLFP
Trigger: AGGAAACAGGAGCCTGGTTCACAGGCTTAGTGATGG...CTGCTCAGCATCTGTCAGTGGAGACCACAGGCCCTGCTGCGGTGGGTGGATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR TCA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATGAGTGGGAACAGAGCTaGGGTGCCAGCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: RSVTMGTGSATARDRKKDEWEQS*GASWSW
Trigger: CCACGACCAGCTGGCACCTCAGCTCTGTTCCCACTC...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGACAGGAGGCAGCCTTCTaGGTGGGAACAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ARDSPYSVATAKVRMASRQEAAF*VGTELR
Trigger: CCTCAGCTCTGTTCCCACTCAGAAGGCTGCCTCCTG...TCTGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AGCACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTACCACGCAGTGCATCATaGAGAGCTTGTCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: STGEAQHSQLCLEQGEVVPRSAS*RACPSA
Trigger: CGCAGAAGGACAAGCTCTTCATGATGCACTGCGTGG...TACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACCCACGCAGTGCATCATaGAGAGCTTGTCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: CPPHCQPLSVQHHRERSDPRSAS*RACPSA
Trigger: CGCAGAAGGACAAGCTCTTCATGATGCACTGCGTGG...GTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp CCTGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGATTCAGTCCAGTGAATaGCAGGTTCTGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PAPGGPQRPSKIHSCGLLIQSSE*QVLCFS
Trigger: AGAGAAGCACAGAACCTGGCATTCACTGGACTGAAT...CAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTACGCACTGTCCGCCTCTaGTGGTCGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALRTVRL*WSVLGG
Trigger: ACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCG...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCTTCTGCGATAGGCCGTaGAGCAGCAGCACCGTGTCC +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFFCDRP*SSSTVS
Trigger: GGACACGGTGCTGCTGCTGCACGGCCTATCGCAGAA...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAAGAGCTTGTCCTTCTaGGATAGGCCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPAKSLSF*DRPCSS
Trigger: GCTGCTGCACGGCCTATCGCAGAAGGACAAGCTCTT...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAAAAGAGCTTGTCCTTCTaGGATAGGCCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQGSFLKADQLPWGRAQQKSLSF*DRPCSS
Trigger: GCTGCTGCACGGCCTATCGCAGAAGGACAAGCTCTT...TTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCGAGGTCATCCAGGGCTaGCTCTTCACAGTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAEVIQG*LFTVRH
Trigger: GTGACGGACTGTGAAGAGGCAGCCCTGGATGACCTC...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATTGTGATCTCGCTGGCTaGAGGGCTGCAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RSVTMGTGSATARDRKKDCDLAG*RAAGLP
Trigger: GGGAAGGCCTGCAGCCCTGCAGCCAGCGAGATCACA...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCTTCAGCATAGCCAGCTCTaGTTGGAGCAGGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PQPKAMTQDNSTGRAGLLQHSQL*LEQGEV
Trigger: GACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTG...AAGGAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp AGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGGCGAGTGTAGATGCTaGCTAGGCTATAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RTSPSAVCESGGDCPYRRGECRC*LGYSSS
Trigger: GGAAGAGCTATAGCCTAGGCAGCATCTACACTCGCC...TCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAACAGGCGAGTGTAGATaGTGCCTAGGCTATAGCTCT +
Preference number: 4 (lower is better)
Translates to: GPGHHPQPCASLEGTAHTTGECR*CLGYSS
Trigger: AGAGCTATAGCCTAGGCAGCATCTACACTCGCCTGT...TGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCGGTTGTGGCCAGGTGTaGAGTGGTTGTGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: WPQPKAMTQDNSTGRAGLGCGQV*SGCDSR
Trigger: TCTGCTGTCACAACCACTGCACACCTGGCCACAACC...GAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp AGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGAGTGTAGATGCTGCCATACAGTGTGGCTACTaGCAAGGTCAGGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRVRVWRGLPIQASVDAAIQCGY*QGQDGQ
Trigger: CTGGCCATCCTGACCTTGGCAGTAGCCACACTGTAT...GGCAGCATCTACACTCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGAAGGCGAAAAGGCAGTaGTGGCCGCGAGGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRKAKRQ*WPRGSE
Trigger: TTCGGAACCTCGCGGCCAGCACTGCCTTTTCGCCTT...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR CCA 90 bp AGGCAGGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCTTCCTAGGACTGACATaGGAAACAGAGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RQGRAPSSRQISYHGDGLFLGLT*ETEGAA
Trigger: GGCTGCTCCCTCTGTTTCCCATGTCAGTCCTAGGAA...GAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCTATCCTGACTCCGTCTaGCAGGGGTGGGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFYPDSV*QGWGRD
Trigger: GTCCCTTCCCCACCCCTGCCAGACGGAGTCAGGATA...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GAGTCCCCAGGTGCTCCGCTTCTCTTAGCAGCTGCCAAGTCCTGCAGGGCCTGGTCACCTCTCAGACTGTaGGGCTTACTATCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ESPGAPLLLAAAKSCRAWSPLRL*GLLSSL
Trigger: CAGAGAGGATAGTAAGCCCCACAGTCTGAGAGGTGA...CCAGGCCCTGCAGGACTTGGCAGCTGCTAAGAGAAGCGGAGCACCTGGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCACGGCTCCAGGAAGCTaGCAGAGTGGGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFTAPGS*QSGKAL
Trigger: AAGGGCCTTCCCACTCTGCCAGCTTCCTGGAGCCGT...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCCAGGGCCTTCAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCAACGGCTCCAGGAAGCTaGCAGAGTGGGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SRAFSAVMLSTQKAPSRATAPGS*QSGKAL
Trigger: AAGGGCCTTCCCACTCTGCCAGCTTCCTGGAGCCGT...TGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTGAAGGCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAATGGGCTGAGGCACTTTaGCAGCACTTGGAACACACA +
Preference number: 4 (lower is better)
Translates to: NRAEVPAGRGPPAGRGAQWAEAL*QHLEHT
Trigger: TGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCA...TTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFRQGCL*AEALWQ
Trigger: CTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCT...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCACCTCCACATTACACTaGCAGTTGGAGCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: EAFQDPQLWPAGGTMHRGTSTLH*QLEPVT
Trigger: AGTCACTGGCTCCAACTGCCAGTGTAATGTGGAGGT...GCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCAGACTGTGGGGCTTACTATCCTCTCTGCCCACCAGAGGCTTGTATCCTGACTACTGTCCGCCTCTGCTaGTCGGTCCTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SDCGAYYPLCPPEACILTTVRLC*SVLGGP
Trigger: GGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGT...AGTCAGGATACAAGCCTCTGGTGGGCAGAGAGGATAGTAAGCCCCACAGTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGGGAAAGGAGTGGTGCTaGTGCCACCATGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQGKEWC*CHHVAG
Trigger: TCCAGCCACATGGTGGCACCAGCACCACTCCTTTCC...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCCAGGGCCTTCAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCAGGCCAGCCAGTTCTCTaGGCAGTTCCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SRAFSAVMLSTQKAPSRAGQPVL*AVPAGH
Trigger: GTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCC...TGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTGAAGGCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCCCTTTTCCTTGTCACTaGGTGCTTGGGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ELRCQLVVVRQQGEELNSPFPCH*VLGFSL
Trigger: AAGAGAAAACCCAAGCACTCAGTGACAAGGAAAAGG...GCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGTGTGGTCCTGAGGCCTaGCATTCCAGCCAAGGTACT +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQCGPEA*HSSQGT
Trigger: AGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACA...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TGGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCTGGCACACCAGGTGCTaGAGAATGCTAAGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: WPQPKAMTQDNSTGRAGLWHTRC*RMLSAV
Trigger: GACTGCACTTAGCATTCTTCAGCACCTGGTGTGCCA...GAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR TCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAGAGTGGGAACAGAGCTaGGGTGCCAGCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALEWEQS*GASWSW
Trigger: CCACGACCAGCTGGCACCTCAGCTCTGTTCCCACTC...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GTGATGTACATGTACAGCAGCAGCAGGAGGCAGCCTTCTGAGTGGGAACAGAGCCAGGAGGCAGCCTTCTaGGTGGGAACAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VMYMYSSSRRQPSEWEQSQEAAF*VGTELR
Trigger: CCTCAGCTCTGTTCCCACTCAGAAGGCTGCCTCCTG...GCTCTGTTCCCACTCAGAAGGCTGCCTCCTGCTGCTGCTGTACATGTACATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCGTGGGGCTTACTATCTaGCATGGGAAACAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCVGLTI*HGKQRE
Trigger: CTCCCTCTGTTTCCCATGTCAGATAGTAAGCCCCAC...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635082.1
CDS-3UTR GCA 90 bp TGGGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGCAGCTGCCAAGTCCTaGAGGGCCTGGCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: WEKGKPVASMSKKMRVCMAAAKS*RAWQCK
Trigger: CTTACACTGCCAGGCCCTGCAGGACTTGGCAGCTGC...CATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCACAGAGAAGCCTTCCAGGATGCACACTGAGTCCTCAGGGTTGGTCTCTACCCGCAGCTGCCAAGTCCTaGAGGGCCTGGCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: SQRSLPGCTLSPQGWSLPAAAKS*RAWQCK
Trigger: CTTACACTGCCAGGCCCTGCAGGACTTGGCAGCTGC...GGGTAGAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAAGGCTTCTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp CGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACACTGAAGAATGCTAAGTaGAGTCACAGAGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RGTPEAFQDPQLWPAGGTLKNAK*SHREAF
Trigger: GAAGGCTTCTCTGTGACTGCACTTAGCATTCTTCAG...TGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR GCA 90 bp GGAACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCCTGAAGAATGCTAAGTaGAGTCACAGAGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GTELRCQLVVVRQQGEELLKNAK*SHREAF
Trigger: GAAGGCTTCTCTGTGACTGCACTTAGCATTCTTCAG...GAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAGGGGGCAAGGGGCTCTaGACACCAAGCTTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALGGKGL*TPSLAR
Trigger: CCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCC...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATCGCACTGTCCGCCTCTaGTGGTCGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNRTVRL*WSVLGG
Trigger: ACCCCCAAGGACCGACCAGCAGAGGCGGACAGTGCG...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATTTCTGCGATAGGCCGTaGAGCAGCAGCACCGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSVTMGTGSATARDRKKDFCDRP*SSSTVS
Trigger: GGACACGGTGCTGCTGCTGCACGGCCTATCGCAGAA...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGGACCTCCACGCAGTaGATCATGAAGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPARTSTQ*IMKSLS
Trigger: GGACAAGCTCTTCATGATGCACTGCGTGGAGGTCCT...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp ATCGGTTTCCGCGGCACAGAGGTCATCCAGGGCTGCCTCTTCACAGTCCGTCACAGGACCTCCACGCAGTaGATCATGAAGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: IGFRGTEVIQGCLFTVRHRTSTQ*IMKSLS
Trigger: GGACAAGCTCTTCATGATGCACTGCGTGGAGGTCCT...GTGACGGACTGTGAAGAGGCAGCCCTGGATGACCTCTGTGCCGCGGAAACCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGAGGTCATCCAGGGCTaGCTCTTCACAGTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPAEVIQG*LFTVRH
Trigger: GTGACGGACTGTGAAGAGGCAGCCCTGGATGACCTC...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCAGCCACCTCCTTCCCTaGCACACAATGGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WPQPKAMTQDNSTGRAGLSHLLP*HTMVSS
Trigger: GGAAGAAACCATTGTGTGGCAGGGAAGGAGGTGGCT...GAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCCAGCATAGCCTGCTGGTGGCACAATaGACCGGGGCCATCATACCA +
Preference number: 4 (lower is better)
Translates to: DAIHTEGTIQSTGEAQHSLLVAQ*TGAIIP
Trigger: TGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAG...GCTATGCTGGGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTACCCTGCTCGTCAGCCTaGCTGGTCTGTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALPCSSA*LVCPSH
Trigger: GTGAGAGGGACAGACCAGGCAGGCTGACGAGCAGGG...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTGCTGAGGCAGGTTTATCAAAATaGAACCTTGAGTGTTTGATC +
Preference number: 4 (lower is better)
Translates to: GPGGRACEPMVGYVPAAEAGLSK*NLECLI
Trigger: GATCAAACACTCAAGGTTCCATTTTGATAAACCTGC...CTCAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCACAGAGAAGCCTTCCAGGATGCACACTGAGTCCTCAGGGTTGGTCTCTACCCACGGCTCCAGGAAGCTaGCAGAGTGGGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SQRSLPGCTLSPQGWSLPTAPGS*QSGKAL
Trigger: AAGGGCCTTCCCACTCTGCCAGCTTCCTGGAGCCGT...GGGTAGAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAAGGCTTCTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGAAGTCCTGCAGGGCCTaGCAGTGTAAGCCGATGAAG +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRKSCRA*QCKPMK
Trigger: CTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTT...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GTCTTCCACATCGGTTTCCGCGGCACAGAGGTCATCCAGGGCTGCCTCTTCACAAAGTCCTGCAGGGCCTaGCAGTGTAAGCCGATGAAG +
Preference number: 4 (lower is better)
Translates to: VFHIGFRGTEVIQGCLFTKSCRA*QCKPMK
Trigger: CTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTT...TGTGAAGAGGCAGCCCTGGATGACCTCTGTGCCGCGGAAACCGATGTGGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp TGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTACTTGGAACACACACTaGAACCTGGGCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: CSRGTPEAFQDPQLWPAGTWNTH*NLGKKS
Trigger: TGATTTCTTGCCCAGGTTCCAGTGTGTGTTCCAAGT...ACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CCA 90 bp TGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCACTTGGAACACACACTaGAACCTGGGCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: WSWSASRERSSTASSTLGTWNTH*NLGKKS
Trigger: TGATTTCTTGCCCAGGTTCCAGTGTGTGTTCCAAGT...GCCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCTGGGCTGAGGCACTTTaGCAGCACTTGGAACACACA +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPAWAEAL*QHLEHT
Trigger: TGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCA...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGACCTCTTGTTCCAGCTaGAGCCATTGTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRTSCSS*SHCVSK
Trigger: CTTGGAGACACAATGGCTCCAGCTGGAACAAGAGGT...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGCAGCACGCTAGGCAGGGGTGTCTCTGGGCTGAGGCACTTTGGCAGCACTTGGACCTCTTGTTCCAGCTaGAGCCATTGTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SSTLGRGVSGLRHFGSTWTSCSS*SHCVSK
Trigger: CTTGGAGACACAATGGCTCCAGCTGGAACAAGAGGT...CCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCTAGCGTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp ACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTAGCGACCTCCACATTACACTaGCAGTTGGAGCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: TGEAQHSQLCLEQGEVVATSTLH*QLEPVT
Trigger: AGTCACTGGCTCCAACTGCCAGTGTAATGTGGAGGT...CGCTACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGACCTCCACATTACACTaGCAGTTGGAGCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRTSTLH*QLEPVT
Trigger: AGTCACTGGCTCCAACTGCCAGTGTAATGTGGAGGT...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATACTGTCCGCCTCTGCTaGTCGGTCCTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNTVRLC*SVLGGP
Trigger: GGGACCCCCAAGGACCGACCAGCAGAGGCGGACAGT...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp ACCAGATTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCTCTCAGGGCTGAGAGGGTGCCACCATGTGGCTaGACACTCAGGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TRFSPVNARFCASLRAERVPPCG*TLRASA
Trigger: GGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCAC...CCTCTCAGCCCTGAGAGAAGCACAGAACCTGGCATTCACTGGACTGAATCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAGCTGGTGCCACCATGTaGCTGGACACTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALAGATM*LDTQGL
Trigger: GAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGC...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCAGACTGTGGGGCTTACTATCCTCTCTGCCCACCAGAGGCTTGTATCCTGACTGCTGGTGCCACCATGTaGCTGGACACTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SDCGAYYPLCPPEACILTAGATM*LDTQGL
Trigger: GAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGC...AGTCAGGATACAAGCCTCTGGTGGGCAGAGAGGATAGTAAGCCCCACAGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp GGCGCCGCAGGAAGGCTAGGAGCAGGTTGGCCAGGTTGTCATCAAAACATTGACGGAAAGGAGTGGTGCTaGTGCCACCATGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GAAGRLGAGWPGCHQNIDGKEWC*CHHVAG
Trigger: TCCAGCCACATGGTGGCACCAGCACCACTCCTTTCC...GTCAATGTTTTGATGACAACCTGGCCAACCTGCTCCTAGCCTTCCTGCGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCGGGAGACTGGATTACTaGATGAGGGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFGRLDY*MRGWAG
Trigger: ACCAGCCCACCCCCTCATCCAGTAATCCAGTCTCCC...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR TCA 90 bp TGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGAAGAACCTGTGGTCCTaGGGCCTGACATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CSSWSHCVSKATLSGRDVKNLWS*GLTFQP
Trigger: TGGCTGGAATGTCAGGCCTCAGGACCACAGGTTCTT...CACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp GGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACCAGATTCAGTCCAGTaGATGCCAGGTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GQGSFLKADQLPWGRAQQPDSVQ*MPGSVL
Trigger: AAGCACAGAACCTGGCATTCACTGGACTGAATCTGG...TTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCGGCAGTGTAAGCCGATaGAGAACTGTACAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: EGQASGLHVEKDEGLHGPGSVSR*RTVQGG
Trigger: TCCCCCTTGTACAGTTCTTCATCGGCTTACACTGCC...GGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGGGCAGTGTAAGCCGATaGAGAACTGTACAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQGSVSR*RTVQGG
Trigger: TCCCCCTTGTACAGTTCTTCATCGGCTTACACTGCC...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCGGCAGTGTAAGCCGATaGAGAACTGTACAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAGSVSR*RTVQGG
Trigger: TCCCCCTTGTACAGTTCTTCATCGGCTTACACTGCC...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GTGTGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCATTCCAGGATGCACACTaGGTCCTCAGGGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VWPGIVHTVWLLPRSGWPFQDAH*VLRVGL
Trigger: GAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAA...TGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR TCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGTGGCACACCAGGTGCTaGAGAATGCTAAGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQWHTRC*RMLSAV
Trigger: GACTGCACTTAGCATTCTTCAGCACCTGGTGTGCCA...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR TCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCCCATCACTAAGCCTGTaGACCAGGCTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAPSLSL*TRLLFP
Trigger: AGGAAACAGGAGCCTGGTTCACAGGCTTAGTGATGG...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR TCA 90 bp ATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATCCCAGCCACTCACACTCTGTCAGGCCGTaGTGTGATGTACATGTACAG +
Preference number: 4 (lower is better)
Translates to: MGTGSATARDRKKDPSHSHSVRP*CDVHVQ
Trigger: CTGTACATGTACATCACATCACGGCCTGACAGAGTG...TGAGTGGCTGGGATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TCCAGGGCCTTCAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCACCACGCAGTGCATCATaGAGAGCTTGTCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SRAFSAVMLSTQKAPSRAPRSAS*RACPSA
Trigger: CGCAGAAGGACAAGCTCTTCATGATGCACTGCGTGG...TGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTGAAGGCCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GAACCTGTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTCCACGCAGTGCATCATaGAGAGCTTGTCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: EPVVLRPDIPAKVLPNPGPRSAS*RACPSA
Trigger: CGCAGAAGGACAAGCTCTTCATGATGCACTGCGTGG...ACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCGCTTACTATCCTCTCTaGCCACCAGAGGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPAAYYPL*PPEACI
Trigger: GATACAAGCCTCTGGTGGGCAGAGAGGATAGTAAGC...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACGCTTACTATCCTCTCTaGCCACCAGAGGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: GRAPSSRQISYHGDGLSNAYYPL*PPEACI
Trigger: GATACAAGCCTCTGGTGGGCAGAGAGGATAGTAAGC...GTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAGCAGCTGCCAAGTCCTaGAGGGCCTGGCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALAAAKS*RAWQCK
Trigger: CTTACACTGCCAGGCCCTGCAGGACTTGGCAGCTGC...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCAGAAGCCTTCCAGGATaGACACTGAGTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: EGQASGLHVEKDEGLHGPRSLPG*TLSPQG
Trigger: ACCCTGAGGACTCAGTGTGCATCCTGGAAGGCTTCT...GGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR GCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGAGAAGCCTTCCAGGATaGACACTGAGTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQRSLPG*TLSPQG
Trigger: ACCCTGAGGACTCAGTGTGCATCCTGGAAGGCTTCT...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR GCA 90 bp GGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGGTTCCTGCTGGTCACTaGTTTAATCAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: GLTHCWEPLLRPFHAHLWVPAGH*FNQLMW
Trigger: CCACATCAACTGATTAAAGCAGTGACCAGCAGGAAC...CCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAAACCCATGGCCCTCCTaGCCTGCGCCATCCCATTGT +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALNPWPS*PAPSHC
Trigger: ACAATGGGATGGCGCAGGGCAGGAGGGCCATGGGTT...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR GCA 90 bp GTGTGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAATCTCAGGCCTTCCCTaGACAATCCTGCCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VWPGIVHTVWLLPRSGWPISGLP*TILPCL
Trigger: CAGACAGGGCAGGATTGTGCAGGGAAGGCCTGAGAT...TGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR GCA 90 bp CCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCTTATACAGTGTGGCTACTaGCAAGGTCAGGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: PQPKAMTQDNSTGRAGLLIQCGY*QGQDGQ
Trigger: CTGGCCATCCTGACCTTGGCAGTAGCCACACTGTAT...AAGGAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCTTCCTAGGACTGACATaGGAAACAGAGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAFLGLT*ETEGAA
Trigger: GGCTGCTCCCTCTGTTTCCCATGTCAGTCCTAGGAA...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCTGGAGAACATGCTTCTaGCTTTATAACCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: ELRCQLVVVRQQGEELNSWRTCF*LYNHRR
Trigger: CCTTCTGTGGTTATAAAGCCAGAAGCATGTTCTCCA...GCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp AGCACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTACACTTTGGCAGCACTTaGAACACACACTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: STGEAQHSQLCLEQGEVVHFGST*NTHWNL
Trigger: CAGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTG...TACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCACCTCTTGTTCCAGCTaGAGCCATTGTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPATSCSS*SHCVSK
Trigger: CTTGGAGACACAATGGCTCCAGCTGGAACAAGAGGT...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACACCTCCACATTACACTaGCAGTTGGAGCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: CPPHCQPLSVQHHRERSDTSTLH*QLEPVT
Trigger: AGTCACTGGCTCCAACTGCCAGTGTAATGTGGAGGT...GTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp GTGATGTACATGTACAGCAGCAGCAGGAGGCAGCCTTCTGAGTGGGAACAGAGCGGAAAGGAGTGGTGCTaGTGCCACCATGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VMYMYSSSRRQPSEWEQSGKEWC*CHHVAG
Trigger: TCCAGCCACATGGTGGCACCAGCACCACTCCTTTCC...GCTCTGTTCCCACTCAGAAGGCTGCCTCCTGCTGCTGCTGTACATGTACATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCGCAGATCAGTTACCATaGGGACGGGCTCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFADQLP*GRAQQQ
Trigger: CTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGC...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGAGCAGATCAGTTACCATaGGGACGGGCTCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: ARDSPYSVATAKVRMASRADQLP*GRAQQQ
Trigger: CTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGC...TCTGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCGCTTACTATCTGACATaGGAAACAGAGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCAYYLT*ETEGAA
Trigger: GGCTGCTCCCTCTGTTTCCCATGTCAGATAGTAAGC...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635082.1
CDS-3UTR CCA 90 bp TGGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCACTTTGGCAGCACTTaGAACACACACTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: WPQPKAMTQDNSTGRAGLHFGST*NTHWNP
Trigger: AGGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTG...GAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR CAA 72 bp AGGTGTGCAGTGGTTGTGACAGCAGATGGTCTTGGCTaGGTCCTAGCAGAGGCTGTGACCCCATACATGGGC +
Preference number: 4 (lower is better)
Translates to: RCAVVVTADGLG*VLAEAVTPYMG
Trigger: GCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGACCATCTGCTGTCACAACCACTGCACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
3UTR CAA 72 bp AGGGAGACTGGATTACTGGATGAGGGGGTGGGCTGGTaGTGTTCACAGTTCTCCCCAATCTTGCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RETGLLDEGVGW*CSQFSPILRLW
Trigger: CCAGAGCCGCAAGATTGGGGAGAACTGTGAACACAACCAGCCCACCCCCTCATCCAGTAATCCAGTCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR CAA 72 bp CAGGGGTGTCTCTGGGCTGAGGCACTTTGGCAGCACTaGGAACACACACTGGAACCCTTTGGTAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QGCLWAEALWQH*EHTLEPFGRVL
Trigger: CAGCACTCTACCAAAGGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR TCA 90 bp TGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACAGAACGGATTCCGTCTaGTGTAGTGAGTCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: CPPHCQPLSVQHHRERSDRTDSV*CSESRK
Trigger: TTTGCGAGACTCACTACATCAGACGGAATCCGTTCT...GTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp CCACACTCCACCTCGGGGTCTTCCACATCGGTTTCCGCGGCACAGAGGTCATCCCCTTTTCCTTGTCACTaGGTGCTTGGGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PHSTSGSSTSVSAAQRSSPFPCH*VLGFSL
Trigger: AAGAGAAAACCCAAGCACTCAGTGACAAGGAAAAGG...GGATGACCTCTGTGCCGCGGAAACCGATGTGGAAGACCCCGAGGTGGAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp CCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCACCAGATTCAGTCCAGTaGATGCCAGGTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PAPPLPLRQTDQTQETRPPDSVQ*MPGSVL
Trigger: AAGCACAGAACCTGGCATTCACTGGACTGAATCTGG...TGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGATGTACATGTGGGTCTCCATCACGTaGGCACTCATTCCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: WSHCVSKATLSGRDVMYMWVSIT*ALIPGN
Trigger: GTTGCCCGGAATGAGTGCTCACGTGATGGAGACCCA...CATGTACATCACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp TTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACACCATCACTAAGCCTGTaGACCAGGCTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLKADQLPWGRAQQQPGTPSLSL*TRLLFP
Trigger: AGGAAACAGGAGCCTGGTTCACAGGCTTAGTGATGG...TGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR TCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGTGTCAGGCCGTGATGTaGTGTACATGTACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRCQAVM*CTCTAA
Trigger: TGCTGCTGTACATGTACATCACATCACGGCCTGACA...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AAGCCCTCGGATGAGCATGCTGACCCCCGGCATCACCTGGTCAAACTGATGCAGTGTCAGGCCGTGATGTaGTGTACATGTACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KPSDEHADPRHHLVKLMQCQAVM*CTCTAA
Trigger: TGCTGCTGTACATGTACATCACATCACGGCCTGACA...CTGCATCAGTTTGACCAGGTGATGCCGGGGGTCAGCATGCTCATCCGAGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp CCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCACACTCTGTCAGGCCGTaGTGTGATGTACATGTACAG +
Preference number: 4 (lower is better)
Translates to: PAPPLPLRQTDQTQETRPHSVRP*CDVHVQ
Trigger: CTGTACATGTACATCACATCACGGCCTGACAGAGTG...TGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGCCTTTGGTAGAGTGCTaGGGGAGACTGGATTACTGG +
Preference number: 4 (lower is better)
Translates to: CSSWSHCVSKATLSGRDVPLVEC*GRLDYW
Trigger: CCAGTAATCCAGTCTCCCTCAGCACTCTACCAAAGG...CACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR GCA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCAGCAGCCAGTTTATTTaGTCGTTCACTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCSSQFI*SFTGLE
Trigger: CTCCAGACCAGTGAACGAGCAAATAAACTGGCTGCT...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR GCA 90 bp CAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGCTGAAGAATGCTAAGTaGAGTCACAGAGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QRPSKIHSCGLLVAQCTGLKNAK*SHREAF
Trigger: GAAGGCTTCTCTGTGACTGCACTTAGCATTCTTCAG...CCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR GCA 90 bp TGGCCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCATCTTCAACAGTGGGTaGTGTCCTTGGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: WPQPKAMTQDNSTGRAGLIFNSG*CPWSSA
Trigger: TGCTGATGACCAAGGACAGCACCCACTGTTGAAGAT...GAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR GCA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATGTCAGCCACTGTCTGTaGAACATCACCGTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: RSVTMGTGSATARDRKKDVSHCL*NITVSA
Trigger: AGCGCTCACGGTGATGTTGCACAGACAGTGGCTGAC...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GAACCTGTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTAGGACCTCCACGCAGTaGATCATGAAGAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EPVVLRPDIPAKVLPNPGRTSTQ*IMKSLS
Trigger: GGACAAGCTCTTCATGATGCACTGCGTGGAGGTCCT...ACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp AACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAAGTTCCTGCTGGTCACTaGTTTAATCAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: NRAEVPAGRGPPAGRGAQVPAGH*FNQLMW
Trigger: CCACATCAACTGATTAAAGCAGTGACCAGCAGGAAC...TTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp GAAAGGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACGTTCCTGCTGGTCACTaGTTTAATCAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: ERSGAGATMWLDTQGLSHVPAGH*FNQLMW
Trigger: CCACATCAACTGATTAAAGCAGTGACCAGCAGGAAC...GTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp ATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCGGCGAGTGTAGATGCTaGCTAGGCTATAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILGTPALSKAGTSVPGCGGECRC*LGYSSS
Trigger: GGAAGAGCTATAGCCTAGGCAGCATCTACACTCGCC...GCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTGGCGAGTGTAGATGCTaGCTAGGCTATAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VLHWRKILGTPALSKAGTGECRC*LGYSSS
Trigger: GGAAGAGCTATAGCCTAGGCAGCATCTACACTCGCC...AGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAACAGGCGAGTGTAGATaGTGCCTAGGCTATAGCTCT +
Preference number: 4 (lower is better)
Translates to: LGYSSSLGRVLRGCLLAPTGECR*CLGYSS
Trigger: AGAGCTATAGCCTAGGCAGCATCTACACTCGCCTGT...TGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CCTGCCACACAATGGTTTCTTCCCATGGCCCCAGCCCAAAGCAATGACTCAGGAGGTTGTGGCCAGGTGTaGAGTGGTTGTGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: PATQWFLPMAPAQSNDSGGCGQV*SGCDSR
Trigger: TCTGCTGTCACAACCACTGCACACCTGGCCACAACC...TCCTGAGTCATTGCTTTGGGCTGGGGCCATGGGAAGAAACCATTGTGTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTGCCAGGCCGGAGAACTaGACCAACCGTCCGCGCGCC +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVARPEN*TNRPRA
Trigger: GGCGCGCGGACGGTTGGTCCAGTTCTCCGGCCTGGC...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CCA 90 bp TGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCATTCCTAGGACTGACATaGGAAACAGAGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WPGIVHTVWLLPRSGWPAFLGLT*ETEGAA
Trigger: GGCTGCTCCCTCTGTTTCCCATGTCAGTCCTAGGAA...TGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCTGGAGAACATGCTTCTaGCTTTATAACCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: EAFQDPQLWPAGGTMHRGWRTCF*LYNHRR
Trigger: CCTTCTGTGGTTATAAAGCCAGAAGCATGTTCTCCA...GCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCTCACCTCTCAGACTGTaGGGCTTACTATCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKASPLRL*GLLSSL
Trigger: CAGAGAGGATAGTAAGCCCCACAGTCTGAGAGGTGA...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCCCTCTTCTTGTTTTATaGAGTCACCTCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: LSRAHLWTASRHSSVTLGPLLVL*SHLSDC
Trigger: ACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGG...GCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATAGGAAGCTGGCAGAGTaGGAAGGCCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNRKLAE*EGPSAS
Trigger: GGAGGCAGAAGGGCCTTCCCACTCTGCCAGCTTCCT...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATAAGTCCTGCAGGGCCTaGCAGTGTAAGCCGATGAAG +
Preference number: 4 (lower is better)
Translates to: RSVTMGTGSATARDRKKDKSCRA*QCKPMK
Trigger: CTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTT...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAAAGCATCTTCAACAGTaGGTGCTGTCCTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: HSCGLLVAQCTGAIIPVTKHLQQ*VLSLVI
Trigger: GATGACCAAGGACAGCACCCACTGTTGAAGATGCTT...TGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CCA 90 bp GGCGCCGCAGGAAGGCTAGGAGCAGGTTGGCCAGGTTGTCATCAAAACATTGACACTGGGTCAGGACACTaGCTTGAAGGTGACCTGTTG +
Preference number: 4 (lower is better)
Translates to: GAAGRLGAGWPGCHQNIDTGSGH*LEGDLL
Trigger: CAACAGGTCACCTTCAAGCCAGTGTCCTGACCCAGT...GTCAATGTTTTGATGACAACCTGGCCAACCTGCTCCTAGCCTTCCTGCGGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCACTGGGTCAGGACACTaGCTTGAAGGTGACCTGTTG +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFTGSGH*LEGDLL
Trigger: CAACAGGTCACCTTCAAGCCAGTGTCCTGACCCAGT...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp ATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCACTGGGTCAGGACACTaGCTTGAAGGTGACCTGTTG +
Preference number: 4 (lower is better)
Translates to: ILGTPALSKAGTSVPGCGTGSGH*LEGDLL
Trigger: CAACAGGTCACCTTCAAGCCAGTGTCCTGACCCAGT...GCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGAACTGGGTCAGGACACTaGCTTGAAGGTGACCTGTTG +
Preference number: 4 (lower is better)
Translates to: ARDSPYSVATAKVRMASRTGSGH*LEGDLL
Trigger: CAACAGGTCACCTTCAAGCCAGTGTCCTGACCCAGT...TCTGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCACACACACTGGAACCTaGGCAAGAAATCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPATHTGT*ARNHRK
Trigger: CTTCCTGTGATTTCTTGCCCAGGTTCCAGTGTGTGT...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR CCA 90 bp GAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCACTTTGGCAGCACTTaGAACACACACTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: EGQASGLHVEKDEGLHGPHFGST*NTHWNL
Trigger: CAGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTG...GGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CCA 90 bp GAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCTTGAAGGTGACCTGTTaGCAGGAGGAATGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: EGQASGLHVEKDEGLHGPLKVTC*QEECVG
Trigger: ACCGACACATTCCTCCTGCCAACAGGTCACCTTCAA...GGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CCA 90 bp TATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTACTTGGAACACACACTaGAACCCTTTGGTAGAGTGC +
Preference number: 4 (lower is better)
Translates to: YSSSLGRVLRGCLLAPGPTWNTH*NPLVEC
Trigger: GCACTCTACCAAAGGGTTCCAGTGTGTGTTCCAAGT...AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
3UTR CAA 72 bp CAGGGGTGTCTCTGGGCTGAGGCACTTTGGCAGCACTaGGAACACACACTGGAACCTGGGCAAGAAATCACA +
Preference number: 4 (lower is better)
Translates to: QGCLWAEALWQH*EHTLEPGQEIT
Trigger: TGTGATTTCTTGCCCAGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCTCAGCCCAGAGACACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp GGAACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCTCTTTGTATTGTGCCTaGAGTACCTCTAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: GTELRCQLVVVRQQGEELSLYCA*STSNSK
Trigger: TTTCGAATTAGAGGTACTTCAGGCACAATACAAAGA...GAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp CTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAAGAACGGATTCCGTCTaGTGTAGTGAGTCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: LGYSSSLGRVLRGCLLAPRTDSV*CSESRK
Trigger: TTTGCGAGACTCACTACATCAGACGGAATCCGTTCT...TGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGAGAACGGATTCCGTCTaGTGTAGTGAGTCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRRTDSV*CSESRK
Trigger: TTTGCGAGACTCACTACATCAGACGGAATCCGTTCT...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR TCA 90 bp GGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGGAGAAGAGTTCAGACTGCAATaGTTGGAGCTTTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GTSVDSQQAQLRDLGLGEEFRLQ*LELFGE
Trigger: TTCTCCAAAAAGCTCCAATCATTGCAGTCTGAACTC...TTCTCCCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAAAGAACCTGTGGTCCTaGGGCCTGACATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALKNLWS*GLTFQP
Trigger: TGGCTGGAATGTCAGGCCTCAGGACCACAGGTTCTT...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATTGGGTCTCCATCACGTaGGCACTCATTCCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNWVSIT*ALIPGN
Trigger: GTTGCCCGGAATGAGTGCTCACGTGATGGAGACCCA...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GCACTCATTCCGGGCAACCAGATTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCTTCCAGGATGCACACTaGGTCCTCAGGGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: ALIPGNQIQSSECQVLCFFQDAH*VLRVGL
Trigger: GAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAA...GAAGCACAGAACCTGGCATTCACTGGACTGAATCTGGTTGCCCGGAATGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp TCTGGGCCTCTTCTTGTTTTATGGAGTCACCTCTCAGACTGTGGGGCTTACTATGAGTGGGAACAGAGCTaGGGTGCCAGCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SGPLLVLWSHLSDCGAYYEWEQS*GASWSW
Trigger: CCACGACCAGCTGGCACCTCAGCTCTGTTCCCACTC...ATAGTAAGCCCCACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTACCACGCAGTGCATCATaGAGAGCTTGTCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALPRSAS*RACPSA
Trigger: CGCAGAAGGACAAGCTCTTCATGATGCACTGCGTGG...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SRAHLWTASRHSSVTLGWTALIS*CGKERS
Trigger: ACTCCTTTCCTTACCACATCAACTGATTAAAGCAGT...CCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp AGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCAACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SSRSYTLLGAPAAALSCPTALIS*CGKERS
Trigger: ACTCCTTTCCTTACCACATCAACTGATTAAAGCAGT...TGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CGCCAGCAGGGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCAGGGGTGTCTCGCTTGGGTTTTCTCTTaGTCAAGAAGAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: RQQGEELNSQQHARQGCLAWVFS*SRRKCD
Trigger: ATCACATTTTCTTCTTGAGCAAGAGAAAACCCAAGC...GAGACACCCCTGCCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCCCTGCTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGAGCAGCCAGTTTATTTaGTCGTTCACTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRSSQFI*SFTGLE
Trigger: CTCCAGACCAGTGAACGAGCAAATAAACTGGCTGCT...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGGCTTACTATCCTCTCTaGCCACCAGAGGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: GEGQASGLHVEKDEGLHGAYYPL*PPEACI
Trigger: GATACAAGCCTCTGGTGGGCAGAGAGGATAGTAAGC...CCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp ATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATCCCAGCCACTCAATTCAGTCCAGTGAATaGCAGGTTCTGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: MGTGSATARDRKKDPSHSIQSSE*QVLCFS
Trigger: AGAGAAGCACAGAACCTGGCATTCACTGGACTGAAT...TGAGTGGCTGGGATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGCAGCTGGAAGGACATTCAGTCCAGTGAATaGCAGGTTCTGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVAQCTGAIIPVTGSWKDIQSSE*QVLCFS
Trigger: AGAGAAGCACAGAACCTGGCATTCACTGGACTGAAT...GTCCTTCCAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGATCTTCAACAGTGGGTaGTGTCCTTGGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRIFNSG*CPWSSA
Trigger: TGCTGATGACCAAGGACAGCACCCACTGTTGAAGAT...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR GCA 90 bp GTCTTCCACATCGGTTTCCGCGGCACAGAGGTCATCCAGGGCTGCCTCTTCACAATCTTCAACAGTGGGTaGTGTCCTTGGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: VFHIGFRGTEVIQGCLFTIFNSG*CPWSSA
Trigger: TGCTGATGACCAAGGACAGCACCCACTGTTGAAGAT...TGTGAAGAGGCAGCCCTGGATGACCTCTGTGCCGCGGAAACCGATGTGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAGTCAGCCACTGTCTGTaGAACATCACCGTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALVSHCL*NITVSA
Trigger: AGCGCTCACGGTGATGTTGCACAGACAGTGGCTGAC...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCGTTCCTGCTGGTCACTaGTTTAATCAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPAVPAGH*FNQLMW
Trigger: CCACATCAACTGATTAAAGCAGTGACCAGCAGGAAC...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATAGCCACCTCCTTCCCTaGCACACAATGGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSVTMGTGSATARDRKKDSHLLP*HTMVSS
Trigger: GGAAGAAACCATTGTGTGGCAGGGAAGGAGGTGGCT...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCCAGCATAGCACAGGCGAGTGTAGATaGTGCCTAGGCTATAGCTCT +
Preference number: 4 (lower is better)
Translates to: DAIHTEGTIQSTGEAQHSTGECR*CLGYSS
Trigger: AGAGCTATAGCCTAGGCAGCATCTACACTCGCCTGT...GCTATGCTGGGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGGGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGATACAGTGTGGCTACTaGCAAGGTCAGGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: WEKGKPVASMSKKMRVCMIQCGY*QGQDGQ
Trigger: CTGGCCATCCTGACCTTGGCAGTAGCCACACTGTAT...CATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCCTGGAAGACAACCGCTaGTTAAATCAGGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFLEDNR*LNQGVP
Trigger: GGGAACACCCTGATTTAAGCAGCGGTTGTCTTCCAG...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR GCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGAAGAATGGGTCCCCATaGATGGGTAGTGATGGTTCT +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRKNGSP*MGSDGS
Trigger: AGAACCATCACTACCCATGCATGGGGACCCATTCTT...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR GCA 90 bp GTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTTCTCCCCAATCTTaGGGCTCTGGGCAAGAAATC +
Preference number: 4 (lower is better)
Translates to: VLHWRKILGTPALSKAGTSSPQS*GSGQEI
Trigger: GATTTCTTGCCCAGAGCCGCAAGATTGGGGAGAACT...AGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CCA 90 bp AGCATCCACCCACCGCAGCAGGGCCTGTGGTCTCCACTGACAGATGCTGAGCAGTATTTGCTCGTTCACTaGTCTGGAGCTTTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SIHPPQQGLWSPLTDAEQYLLVH*SGALSL
Trigger: TAAGGACAAAGCTCCAGACCAGTGAACGAGCAAATA...CTGCTCAGCATCTGTCAGTGGAGACCACAGGCCCTGCTGCGGTGGGTGGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGATCACCTCTCAGACTGTaGGGCTTACTATCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ARDSPYSVATAKVRMASRSPLRL*GLLSSL
Trigger: CAGAGAGGATAGTAAGCCCCACAGTCTGAGAGGTGA...TCTGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGCCTCTTCTTGTTTTATaGAGTCACCTCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRPLLVL*SHLSDC
Trigger: ACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGG...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAAGCATCTTCAACAGTaGGTGCTGTCCTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAKHLQQ*VLSLVI
Trigger: GATGACCAAGGACAGCACCCACTGTTGAAGATGCTT...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR CCA 90 bp CAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACAGAAGCATCTTCAACAGTaGGTGCTGTCCTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: QGSFLKADQLPWGRAQQQKHLQQ*VLSLVI
Trigger: GATGACCAAGGACAGCACCCACTGTTGAAGATGCTT...CTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CCA 90 bp GAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCACACACACTGGAACCTaGGCAAGAAATCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGQASGLHVEKDEGLHGPTHTGT*ARNHRK
Trigger: CTTCCTGTGATTTCTTGCCCAGGTTCCAGTGTGTGT...GGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGATCGGCTGTTTGACCTaGCTAATGCATTTCCCCCTA +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQIGCLT*LMHFPL
Trigger: TAGGGGGAAATGCATTAGCCAGGTCAAACAGCCGAT...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412052.4
3UTR CAA 72 bp GGCACTGGGTCAGGACACTGGCTTGAAGGTGACCTGTaGCTGCAGAAGAGAAAGCCAACAGGTGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GTGSGHWLEGDL*LQKRKPTGEEA
Trigger: TGCTTCTTCACCTGTTGGCTTTCTCTTCTGCAGCAACAGGTCACCTTCAAGCCAGTGTCCTGACCCAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCCCTTTTCCTTGTCACTaGGTGCTTGGGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAPFPCH*VLGFSL
Trigger: AAGAGAAAACCCAAGCACTCAGTGACAAGGAAAAGG...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR TCA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGGAGTTCAGACTGCAATaGTTGGAGCTTTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPEFRLQ*LELFGE
Trigger: TTCTCCAAAAAGCTCCAATCATTGCAGTCTGAACTC...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp CAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGATCAAAATGGAACCTTaGGTGTTTGATCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QRPSKIHSCGLLVAQCTGIKMEP*VFDLCL
Trigger: GAGACAGAGATCAAACACTCAAGGTTCCATTTTGAT...CCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp ACTGGTGAGGCCCAGCATAGCCAGCTCTGCTTGGAGCAGGGGGAAGTCGTAGCGATCAAAATGGAACCTTaGGTGTTTGATCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TGEAQHSQLCLEQGEVVAIKMEP*VFDLCL
Trigger: GAGACAGAGATCAAACACTCAAGGTTCCATTTTGAT...CGCTACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp CACCTGGTCAAACTGATGCAGGACCTCCACGCAGTGCATCATGAAGAGCTTGTCGGCAGTGTAAGCCGATaGAGAACTGTACAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: HLVKLMQDLHAVHHEELVGSVSR*RTVQGG
Trigger: TCCCCCTTGTACAGTTCTTCATCGGCTTACACTGCC...GACAAGCTCTTCATGATGCACTGCGTGGAGGTCCTGCATCAGTTTGACCAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp TTATGGAGTCACCTCTCAGACTGTGGGGCTTACTATCCTCTCTGCCCACCAGAGTGGCACACCAGGTGCTaGAGAATGCTAAGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LWSHLSDCGAYYPLCPPEWHTRC*RMLSAV
Trigger: GACTGCACTTAGCATTCTTCAGCACCTGGTGTGCCA...CTCTGGTGGGCAGAGAGGATAGTAAGCCCCACAGTCTGAGAGGTGACTCCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp GCACTCATTCCGGGCAACCAGATTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCCCATCACTAAGCCTGTaGACCAGGCTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ALIPGNQIQSSECQVLCFPSLSL*TRLLFP
Trigger: AGGAAACAGGAGCCTGGTTCACAGGCTTAGTGATGG...GAAGCACAGAACCTGGCATTCACTGGACTGAATCTGGTTGCCCGGAATGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp CAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCGAGAAAGCCAACAGGTaGAGAAGCATCTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: QRSDAIHTEGTIQSTGEAEKANR*RSIFNS
Trigger: ACTGTTGAAGATGCTTCTTCACCTGTTGGCTTTCTC...GGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR TCA 90 bp CCTGCCACACAATGGTTTCTTCCCATGGCCCCAGCCCAAAGCAATGACTCAGGATGTCAGGCCGTGATGTaGTGTACATGTACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PATQWFLPMAPAQSNDSGCQAVM*CTCTAA
Trigger: TGCTGCTGTACATGTACATCACATCACGGCCTGACA...TCCTGAGTCATTGCTTTGGGCTGGGGCCATGGGAAGAAACCATTGTGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp TGGCCAGGTTGTCATCAAAACATTGACGCCCATGCGCTGCCAGCACAGCTGTGCAGCAGCCAGTTTATTTaGTCGTTCACTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: WPGCHQNIDAHALPAQLCSSQFI*SFTGLE
Trigger: CTCCAGACCAGTGAACGAGCAAATAAACTGGCTGCT...GCACAGCTGTGCTGGCAGCGCATGGGCGTCAATGTTTTGATGACAACCTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCAGCAGCCAGTTTATTTaGTCGTTCACTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFSSQFI*SFTGLE
Trigger: CTCCAGACCAGTGAACGAGCAAATAAACTGGCTGCT...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAATTCAGTCCAGTGAATaGCAGGTTCTGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PAPPLPLRQTDQTQETRPIQSSE*QVLCFS
Trigger: AGAGAAGCACAGAACCTGGCATTCACTGGACTGAAT...TGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCTGAAGAATGCTAAGTaGAGTCACAGAGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRLKNAK*SHREAF
Trigger: GAAGGCTTCTCTGTGACTGCACTTAGCATTCTTCAG...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR GCA 90 bp TTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCTCTCAGGGCTGAGAGGGAAAATGAGGTCATCCAGGGCTaGCTCTTCACAGTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: FSPVNARFCASLRAERENEVIQG*LFTVRH
Trigger: GTGACGGACTGTGAAGAGGCAGCCCTGGATGACCTC...ATTTTCCCTCTCAGCCCTGAGAGAAGCACAGAACCTGGCATTCACTGGACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCTGTTCCAAGGATCTCTaGTTAGAACCAAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPACSKDL*LEPRTK
Trigger: CTTGGTTCTTGGTTCTAAGCAGAGATCCTTGGAACA...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR CCA 90 bp GAAAGGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACTCAGACTGCAATGATTaGAGCTTTTTGGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: ERSGAGATMWLDTQGLSHSDCND*SFLENS
Trigger: GGAATTCTCCAAAAAGCTCCAATCATTGCAGTCTGA...GTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp CCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCTCGTTCACTGGTCTaGAGCTTTGTCCTTAATTCA +
Preference number: 4 (lower is better)
Translates to: PAPPLPLRQTDQTQETRPARSLV*SFVLNS
Trigger: TGAATTAAGGACAAAGCTCCAGACCAGTGAACGAGC...TGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CCAGCAGCAGAATCTGCCCCCACTCCTGACAGTAATAGGGAGACGACTGCTCCGGCTCGTTCACTGGTCTaGAGCTTTGTCCTTAATTCA +
Preference number: 4 (lower is better)
Translates to: PAAESAPTPDSNRETTAPARSLV*SFVLNS
Trigger: TGAATTAAGGACAAAGCTCCAGACCAGTGAACGAGC...CGGAGCAGTCGTCTCCCTATTACTGTCAGGAGTGGGGGCAGATTCTGCTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCTATTTGCTCGTTCACTaGTCTGGAGCTTTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCYLLVH*SGALSL
Trigger: TAAGGACAAAGCTCCAGACCAGTGAACGAGCAAATA...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CCA 90 bp TGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACTGGAGAACATGCTTCTaGCTTTATAACCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: CPPHCQPLSVQHHRERSDWRTCF*LYNHRR
Trigger: CCTTCTGTGGTTATAAAGCCAGAAGCATGTTCTCCA...GTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp CACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACACCTCTTCTTGTTTTATaGAGTCACCTCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: HSCGLLVAQCTGAIIPVTPLLVL*SHLSDC
Trigger: ACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGG...TGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACGCAGGTTTATCAAAATaGAACCTTGAGTGTTTGATC +
Preference number: 4 (lower is better)
Translates to: PWGSPCPPHCQPLSVQHHAGLSK*NLECLI
Trigger: GATCAAACACTCAAGGTTCCATTTTGATAAACCTGC...GTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp GTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTACACACACTGGAACCTaGGCAAGAAATCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLHWRKILGTPALSKAGTTHTGT*ARNHRK
Trigger: CTTCCTGTGATTTCTTGCCCAGGTTCCAGTGTGTGT...AGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CCA 90 bp GAACCTGTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTACACACACTGGAACCTaGGCAAGAAATCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: EPVVLRPDIPAKVLPNPGTHTGT*ARNHRK
Trigger: CTTCCTGTGATTTCTTGCCCAGGTTCCAGTGTGTGT...ACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp CTAGGCTATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAACTTGGAACACACACTaGAACCTGGGCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: LGYSSSLGRVLRGCLLAPTWNTH*NLGKKS
Trigger: TGATTTCTTGCCCAGGTTCCAGTGTGTGTTCCAAGT...TGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGACTTGGAACACACACTaGAACCTGGGCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQTWNTH*NLGKKS
Trigger: TGATTTCTTGCCCAGGTTCCAGTGTGTGTTCCAAGT...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR CCA 90 bp TCTGGGCCTCTTCTTGTTTTATGGAGTCACCTCTCAGACTGTGGGGCTTACTATAGGCAGGGGTGTCTCTaGGCTGAGGCACTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SGPLLVLWSHLSDCGAYYRQGCL*AEALWQ
Trigger: CTGCCAAAGTGCCTCAGCCCAGAGACACCCCTGCCT...ATAGTAAGCCCCACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGTCTTTGTATTGTGCCTaGAGTACCTCTAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRSLYCA*STSNSK
Trigger: TTTCGAATTAGAGGTACTTCAGGCACAATACAAAGA...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR TCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCGAGTTCAGACTGCAATaGTTGGAGCTTTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAEFRLQ*LELFGE
Trigger: TTCTCCAAAAAGCTCCAATCATTGCAGTCTGAACTC...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR TCA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCATCAAAATGGAACCTTaGGTGTTTGATCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCIKMEP*VFDLCL
Trigger: GAGACAGAGATCAAACACTCAAGGTTCCATTTTGAT...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR TCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCGAGAAAGCCAACAGGTaGAGAAGCATCTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFEKANR*RSIFNS
Trigger: ACTGTTGAAGATGCTTCTTCACCTGTTGGCTTTCTC...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR TCA 90 bp GCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGAGAGAAAGCCAACAGGTaGAGAAGCATCTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: ARDSPYSVATAKVRMASREKANR*RSIFNS
Trigger: ACTGTTGAAGATGCTTCTTCACCTGTTGGCTTTCTC...TCTGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR TCA 90 bp TGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGGAGAAAGCCAACAGGTaGAGAAGCATCTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: CSSWSHCVSKATLSGRDVEKANR*RSIFNS
Trigger: ACTGTTGAAGATGCTTCTTCACCTGTTGGCTTTCTC...CACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp TATAGCTCTTCCTTGGGCCGTGTTCTGAGGGGCTGCTTGCTCGCTCCAGGGCCTACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: YSSSLGRVLRGCLLAPGPTALIS*CGKERS
Trigger: ACTCCTTTCCTTACCACATCAACTGATTAAAGCAGT...AGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAAGGAAGAGCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CPPHCQPLSVQHHRERSDTALIS*CGKERS
Trigger: ACTCCTTTCCTTACCACATCAACTGATTAAAGCAGT...GTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAAATCTGTGGACCTTATaGTCACCTGTGTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALNLWTL*SPVSGS
Trigger: GGAGCCAGACACAGGTGATCATAAGGTCCACAGATT...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR GCA 90 bp GGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCGCTTGGGTTTTCTCTTaGTCAAGAAGAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: GPQRPSKIHSCGLLVAQCAWVFS*SRRKCD
Trigger: ATCACATTTTCTTCTTGAGCAAGAGAAAACCCAAGC...GCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR GCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAACTGGAGTTCAGACTaGAATGATTGGAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPANWSSD*NDWSFL
Trigger: CAAAAAGCTCCAATCATTGCAGTCTGAACTCCAGTT...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR GCA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCAACTGGAGTTCAGACTaGAATGATTGGAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCNWSSD*NDWSFL
Trigger: CAAAAAGCTCCAATCATTGCAGTCTGAACTCCAGTT...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR GCA 90 bp CCTGCCACACAATGGTTTCTTCCCATGGCCCCAGCCCAAAGCAATGACTCAGGAATCTTCAACAGTGGGTaGTGTCCTTGGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: PATQWFLPMAPAQSNDSGIFNSG*CPWSSA
Trigger: TGCTGATGACCAAGGACAGCACCCACTGTTGAAGAT...TCCTGAGTCATTGCTTTGGGCTGGGGCCATGGGAAGAAACCATTGTGTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CCA 90 bp CTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACCACCTCAGACTGCAATGATTaGAGCTTTTTGGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: LRTVSHCLCNITVSALTTSDCND*SFLENS
Trigger: GGAATTCTCCAAAAAGCTCCAATCATTGCAGTCTGA...GGTGGTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp GTGTGGCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCTCGTTCACTGGTCTaGAGCTTTGTCCTTAATTCA +
Preference number: 4 (lower is better)
Translates to: VWPGIVHTVWLLPRSGWPARSLV*SFVLNS
Trigger: TGAATTAAGGACAAAGCTCCAGACCAGTGAACGAGC...TGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCTGGAGAACATGCTTCTaGCTTTATAACCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SWLGPSRGCDPIHGPDGAWRTCF*LYNHRR
Trigger: CCTTCTGTGGTTATAAAGCCAGAAGCATGTTCTCCA...GGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGGCAGGTTTATCAAAATaGAACCTTGAGTGTTTGATC +
Preference number: 4 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRAGLSK*NLECLI
Trigger: GATCAAACACTCAAGGTTCCATTTTGATAAACCTGC...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GTGATGTACATGTACAGCAGCAGCAGGAGGCAGCCTTCTGAGTGGGAACAGAGCAAGCATCTTCAACAGTaGGTGCTGTCCTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: VMYMYSSSRRQPSEWEQSKHLQQ*VLSLVI
Trigger: GATGACCAAGGACAGCACCCACTGTTGAAGATGCTT...GCTCTGTTCCCACTCAGAAGGCTGCCTCCTGCTGCTGCTGTACATGTACATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTACACTTTGGCAGCACTTaGAACACACACTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALHFGST*NTHWNL
Trigger: CAGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTG...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR TCA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCTCTTTGTATTGTGCCTaGAGTACCTCTAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: APPLPLRQTDQTQETRPASLYCA*STSNSK
Trigger: TTTCGAATTAGAGGTACTTCAGGCACAATACAAAGA...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR TCA 90 bp GGTAAGGAAAGGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCTCTTTGTATTGTGCCTaGAGTACCTCTAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: GKERSGAGATMWLDTQGLSLYCA*STSNSK
Trigger: TTTCGAATTAGAGGTACTTCAGGCACAATACAAAGA...GAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCCTTTCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR TCA 90 bp GAACCTGTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGAGTTCAGACTGCAATaGTTGGAGCTTTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: EPVVLRPDIPAKVLPNPGEFRLQ*LELFGE
Trigger: TTCTCCAAAAAGCTCCAATCATTGCAGTCTGAACTC...ACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACAGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR TCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCATCAAAATGGAACCTTaGGTGTTTGATCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAIKMEP*VFDLCL
Trigger: GAGACAGAGATCAAACACTCAAGGTTCCATTTTGAT...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGACTGCTTTAATCAGTTaGTGTGGTAAGGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQTALIS*CGKERS
Trigger: ACTCCTTTCCTTACCACATCAACTGATTAAAGCAGT...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR GCA 90 bp CTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGAACTGGAGTTCAGACTaGAATGATTGGAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LGTPALSKAGTSVPGCGQNWSSD*NDWSFL
Trigger: CAAAAAGCTCCAATCATTGCAGTCTGAACTCCAGTT...CTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCTCAGACTGCAATGATTaGAGCTTTTTGGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKASDCND*SFLENS
Trigger: GGAATTCTCCAAAAAGCTCCAATCATTGCAGTCTGA...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR CCA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGTCAGACTGCAATGATTaGAGCTTTTTGGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQSDCND*SFLENS
Trigger: GGAATTCTCCAAAAAGCTCCAATCATTGCAGTCTGA...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR CCA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGTCTGCATCTTTAAACTaGAGTTCAGACTGCAATGAT +
Preference number: 4 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPSASLN*SSDCND
Trigger: ATCATTGCAGTCTGAACTCCAGTTTAAAGATGCAGA...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CCA 90 bp TGCCCTCCGCACTGTCAGCCACTGTCTGTGCAACATCACCGTGAGCGCTCTGACTCTGCATCTTTAAACTaGAGTTCAGACTGCAATGAT +
Preference number: 4 (lower is better)
Translates to: CPPHCQPLSVQHHRERSDSASLN*SSDCND
Trigger: ATCATTGCAGTCTGAACTCCAGTTTAAAGATGCAGA...GTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp GCCAGGGATAGTCCATACAGTGTGGCTACTGCCAAGGTCAGGATGGCCAGCAGATATTTGCTCGTTCACTaGTCTGGAGCTTTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: ARDSPYSVATAKVRMASRYLLVH*SGALSL
Trigger: TAAGGACAAAGCTCCAGACCAGTGAACGAGCAAATA...TCTGCTGGCCATCCTGACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp GGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGTATTTGCTCGTTCACTaGTCTGGAGCTTTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: GEGQASGLHVEKDEGLHGYLLVH*SGALSL
Trigger: TAAGGACAAAGCTCCAGACCAGTGAACGAGCAAATA...CCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATTCACCTCTCAGACTGTaGGGCTTACTATCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNSPLRL*GLLSSL
Trigger: CAGAGAGGATAGTAAGCCCCACAGTCTGAGAGGTGA...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATACCTCCACATTACACTaGCAGTTGGAGCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNTSTLH*QLEPVT
Trigger: AGTCACTGGCTCCAACTGCCAGTGTAATGTGGAGGT...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATATGGGTCCCCATGCATaGGTAGTGATGGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNMGPHA*VVMVLM
Trigger: CATCAGAACCATCACTACCCATGCATGGGGACCCAT...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR TCA 90 bp TTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCTCTCAGGGCTGAGAGGGAAAATCCAGATTCAGTCCAGTaGATGCCAGGTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: FSPVNARFCASLRAERENPDSVQ*MPGSVL
Trigger: AAGCACAGAACCTGGCATTCACTGGACTGAATCTGG...ATTTTCCCTCTCAGCCCTGAGAGAAGCACAGAACCTGGCATTCACTGGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTAATCTGTGGACCTTATaGTCACCTGCCGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVNLWTL*SPAARP
Trigger: CGGCCTGGCGGCAGGTGATCATAAGGTCCACAGATT...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR GCA 90 bp CCCCAGCCCAAAGCAATGACTCAGGACAATTCCACAGGCAGGGCAGGGCTCCTTGCTTGGGTTTTCTCTTaGTCAAGAAGAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: PQPKAMTQDNSTGRAGLLAWVFS*SRRKCD
Trigger: ATCACATTTTCTTCTTGAGCAAGAGAAAACCCAAGC...AAGGAGCCCTGCCCTGCCTGTGGAATTGTCCTGAGTCATTGCTTTGGGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR GCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCGCTTGGGTTTTCTCTTaGTCAAGAAGAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAAWVFS*SRRKCD
Trigger: ATCACATTTTCTTCTTGAGCAAGAGAAAACCCAAGC...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR GCA 90 bp TGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGAACTGGAGTTCAGACTaGAATGATTGGAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: CSSWSHCVSKATLSGRDVNWSSD*NDWSFL
Trigger: CAAAAAGCTCCAATCATTGCAGTCTGAACTCCAGTT...CACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR GCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATAGCAGCCAGTTTATTTaGTCGTTCACTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNSSQFI*SFTGLE
Trigger: CTCCAGACCAGTGAACGAGCAAATAAACTGGCTGCT...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCGCAGGTTTATCAAAATaGAACCTTGAGTGTTTGATC +
Preference number: 4 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAAGLSK*NLECLI
Trigger: GATCAAACACTCAAGGTTCCATTTTGATAAACCTGC...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp TTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCTCTCAGGGCTGAGAGGGAAAATGGGACCTACAGATGGTaGTATGAAGTGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: FSPVNARFCASLRAERENGTYRW*YEVSAF
Trigger: GAAAGCAGACACTTCATATCACCATCTGTAGGTCCC...ATTTTCCCTCTCAGCCCTGAGAGAAGCACAGAACCTGGCATTCACTGGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp TTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCTCTCAGGGCTGAGAGGGAAAATAGCAGCCAGTTTATTTaGTCGTTCACTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: FSPVNARFCASLRAERENSSQFI*SFTGLE
Trigger: CTCCAGACCAGTGAACGAGCAAATAAACTGGCTGCT...ATTTTCCCTCTCAGCCCTGAGAGAAGCACAGAACCTGGCATTCACTGGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCTCTGCATCTTTAAACTaGAGTTCAGACTGCAATGAT +
Preference number: 4 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFSASLN*SSDCND
Trigger: ATCATTGCAGTCTGAACTCCAGTTTAAAGATGCAGA...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR CCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTACCTCTTCTTGTTTTATaGAGTCACCTCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALPLLVL*SHLSDC
Trigger: ACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGG...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp TGTTCCAGCTGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGGCAGGTTTATCAAAATaGAACCTTGAGTGTTTGATC +
Preference number: 4 (lower is better)
Translates to: CSSWSHCVSKATLSGRDVAGLSK*NLECLI
Trigger: GATCAAACACTCAAGGTTCCATTTTGATAAACCTGC...CACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CCA 90 bp CCAAATTGTGGAGAACATGCTTCTGGCTTTATAACCACAGAAGGGTTTTTCCTAAGGAAGCTGGCAGAGTaGGAAGGCCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PNCGEHASGFITTEGFFLRKLAE*EGPSAS
Trigger: GGAGGCAGAAGGGCCTTCCCACTCTGCCAGCTTCCT...TAGGAAAAACCCTTCTGTGGTTATAAAGCCAGAAGCATGTTCTCCACAATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTAAGTCCTGCAGGGCCTaGCAGTGTAAGCCGATGAAG +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVKSCRA*QCKPMK
Trigger: CTTCATCGGCTTACACTGCCAGGCCCTGCAGGACTT...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATCAAAATGGAACCTTaGGTGTTTGATCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SGNKASQFSGQFLLVTALIKMEP*VFDLCL
Trigger: GAGACAGAGATCAAACACTCAAGGTTCCATTTTGAT...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR TCA 90 bp GCACTCATTCCGGGCAACCAGATTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCATCAAAATGGAACCTTaGGTGTTTGATCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ALIPGNQIQSSECQVLCFIKMEP*VFDLCL
Trigger: GAGACAGAGATCAAACACTCAAGGTTCCATTTTGAT...GAAGCACAGAACCTGGCATTCACTGGACTGAATCTGGTTGCCCGGAATGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATTATTTGCTCGTTCACTaGTCTGGAGCTTTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNYLLVH*SGALSL
Trigger: TAAGGACAAAGCTCCAGACCAGTGAACGAGCAAATA...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATTGGAGAACATGCTTCTaGCTTTATAACCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNWRTCF*LYNHRR
Trigger: CCTTCTGTGGTTATAAAGCCAGAAGCATGTTCTCCA...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CCA 90 bp CCAATCTTGCGGCTCTGGGCAAGAAATCACAGGAAGTGTTTTCGGCTAATTTCACCAATCTTGCGGCTCTaGGCAAGAAATCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: PILRLWARNHRKCFRLISPILRL*ARNHRK
Trigger: CTTCCTGTGATTTCTTGCCCAGAGCCGCAAGATTGG...TGAAATTAGCCGAAAACACTTCCTGTGATTTCTTGCCCAGAGCCGCAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR TCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTCACTCTGTCAGGCCGTaGTGTGATGTACATGTACAG +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVHSVRP*CDVHVQ
Trigger: CTGTACATGTACATCACATCACGGCCTGACAGAGTG...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp ACCAGATTCAGTCCAGTGAATGCCAGGTTCTGTGCTTCTCTCAGGGCTGAGAGGTCTGCATCTTTAAACTaGAGTTCAGACTGCAATGAT +
Preference number: 4 (lower is better)
Translates to: TRFSPVNARFCASLRAERSASLN*SSDCND
Trigger: ATCATTGCAGTCTGAACTCCAGTTTAAAGATGCAGA...CCTCTCAGCCCTGAGAGAAGCACAGAACCTGGCATTCACTGGACTGAATCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTACCTCTTGTTCCAGCTaGAGCCATTGTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVTSCSS*SHCVSK
Trigger: CTTGGAGACACAATGGCTCCAGCTGGAACAAGAGGT...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR TCA 90 bp GGATCAAAGGCTGCTTCAGGAGCAGGTTTATCAAAATGGAACCTTGAGTGTTTGAGAACGGATTCCGTCTaGTGTAGTGAGTCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: GSKAASGAGLSKWNLECLRTDSV*CSESRK
Trigger: TTTGCGAGACTCACTACATCAGACGGAATCCGTTCT...CAAACACTCAAGGTTCCATTTTGATAAACCTGCTCCTGAAGCAGCCTTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CCA 90 bp TCTGGGCCTCTTCTTGTTTTATGGAGTCACCTCTCAGACTGTGGGGCTTACTATTATTTGCTCGTTCACTaGTCTGGAGCTTTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SGPLLVLWSHLSDCGAYYYLLVH*SGALSL
Trigger: TAAGGACAAAGCTCCAGACCAGTGAACGAGCAAATA...ATAGTAAGCCCCACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTTCACCTCTCAGACTGTaGGGCTTACTATCTGACATG +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVSPLRL*GLLSDM
Trigger: CATGTCAGATAGTAAGCCCCACAGTCTGAGAGGTGA...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635082.1
CDS-3UTR TCA 90 bp GGATCAAAGGCTGCTTCAGGAGCAGGTTTATCAAAATGGAACCTTGAGTGTTTGCCTTTTCCTTGTCACTaGGTGCTTGGGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GSKAASGAGLSKWNLECLPFPCH*VLGFSL
Trigger: AAGAGAAAACCCAAGCACTCAGTGACAAGGAAAAGG...CAAACACTCAAGGTTCCATTTTGATAAACCTGCTCCTGAAGCAGCCTTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR GCA 90 bp TCTGGGCCTCTTCTTGTTTTATGGAGTCACCTCTCAGACTGTGGGGCTTACTATAACTGGAGTTCAGACTaGAATGATTGGAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: SGPLLVLWSHLSDCGAYYNWSSD*NDWSFL
Trigger: CAAAAAGCTCCAATCATTGCAGTCTGAACTCCAGTT...ATAGTAAGCCCCACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGGCCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR GCA 90 bp GGATCAAAGGCTGCTTCAGGAGCAGGTTTATCAAAATGGAACCTTGAGTGTTTGATTCAGTCCAGTGAATaGCAGGTTCTGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSKAASGAGLSKWNLECLIQSSE*QVLCFS
Trigger: AGAGAAGCACAGAACCTGGCATTCACTGGACTGAAT...CAAACACTCAAGGTTCCATTTTGATAAACCTGCTCCTGAAGCAGCCTTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CCA 90 bp GGATCAAAGGCTGCTTCAGGAGCAGGTTTATCAAAATGGAACCTTGAGTGTTTGGCTCGTTCACTGGTCTaGAGCTTTGTCCTTAATTCA +
Preference number: 4 (lower is better)
Translates to: GSKAASGAGLSKWNLECLARSLV*SFVLNS
Trigger: TGAATTAAGGACAAAGCTCCAGACCAGTGAACGAGC...CAAACACTCAAGGTTCCATTTTGATAAACCTGCTCCTGAAGCAGCCTTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR TCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTGAGTTCAGACTGCAATaGTTGGAGCTTTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVEFRLQ*LELFGE
Trigger: TTCTCCAAAAAGCTCCAATCATTGCAGTCTGAACTC...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTTCAGACTGCAATGATTaGAGCTTTTTGGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVSDCND*SFLENS
Trigger: GGAATTCTCCAAAAAGCTCCAATCATTGCAGTCTGA...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR TCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTTCTTTGTATTGTGCCTaGAGTACCTCTAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVSLYCA*STSNSK
Trigger: TTTCGAATTAGAGGTACTTCAGGCACAATACAAAGA...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR GCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTGCTTGGGTTTTCTCTTaGTCAAGAAGAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVAWVFS*SRRKCD
Trigger: ATCACATTTTCTTCTTGAGCAAGAGAAAACCCAAGC...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CCA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTTCTGCATCTTTAAACTaGAGTTCAGACTGCAATGAT +
Preference number: 4 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVSASLN*SSDCND
Trigger: ATCATTGCAGTCTGAACTCCAGTTTAAAGATGCAGA...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CCA 90 bp CGTTCACTGGTCTGGAGCTTTGTCCTTAATTCATTCATCTCTGCATCTTTAAACCCTCTTCTTGTTTTATaGAGTCACCTCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: RSLVWSFVLNSFISASLNPLLVL*SHLSDC
Trigger: ACAGTCTGAGAGGTGACTCCATAAAACAAGAAGAGG...GTTTAAAGATGCAGAGATGAATGAATTAAGGACAAAGCTCCAGACCAGTGAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS CCA 90 bp TCCGACAGCGCCGAGCTAGACTTGCCTGCCGCCAGGCCGGAGAACTaGACCAACCGTCCGCGCGCCGCCGCTTGCCTCCGCCGCGAGTGC +
Preference number: 5 (lower is better)
Translates to: SDSAELDLPAARPEN*TNRPRAAACLRREC
Trigger: GCACTCGCGGCGGAGGCAAGCGGCGGCGCGCGGACGGTTGGTCCAGTTCTCCGGCCTGGCGGCAGGCAAGTCTAGCTCGGCGCTGTCGGA
73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346691.9
CDS-3UTR CAA 90 bp TGCATGGGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTGGCTCGCTCCGCCTCTaGCTGCCTGGCGCGGAGGTC +
Preference number: 5 (lower is better)
Translates to: CMGPGGRACEPMVGYVPAGSLRL*LPGAEV
Trigger: GACCTCCGCGCCAGGCAGCAAGAGGCGGAGCGAGCC...AGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCCCATGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS GCA 90 bp GCGAGGGTGTCAAGCTCCTCCAGGTCGTCGGCAGTGAAGTCCCCATaGGCGCCGAACGGGTCGTCAGGGTCCGGGGCAGCGGCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: ARVSSSSRSSAVKSP*APNGSSGSGAAAAE
Trigger: CTCCGCAGCCGCTGCCCCGGACCCTGACGACCCGTTCGGCGCGCATGGGGACTTCACTGCCGACGACCTGGAGGAGCTTGACACCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000346691.9
ENST00000635464.1
CDS TCA 90 bp GGGCCTGTGACGCGAGGGTGTCAAGCTCCTCCAGGTCGTCGGCAGTaGAGTCCCCATGCGCGCCGAACGGGTCGTCAGGGTCCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: GPVTRGCQAPPGRRQ*SPHARRTGRQGPGQ
Trigger: CTGCCCCGGACCCTGACGACCCGTTCGGCGCGCATGGGGACTTCACTGCCGACGACCTGGAGGAGCTTGACACCCTCGCGTCACAGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000346691.9
ENST00000635464.1
CDS GCA 90 bp TTTCCGCTCACCCCAAGTATCCGACAGCGCCGAGCTAGACTTGCCTaGCGCCAGGCCGGAGAACTGGACCAACCGTCCGCGCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: FPLTPSIRQRRARLA*RQAGELDQPSARRR
Trigger: GCGGCGGCGCGCGGACGGTTGGTCCAGTTCTCCGGCCTGGCGGCAGGCAAGTCTAGCTCGGCGCTGTCGGATACTTGGGGTGAGCGGAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000346691.9
CDS-3UTR CAA 90 bp TGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCCCTGCGCCATCCCATaGTGGGGGCCACACTCACCG +
Preference number: 5 (lower is better)
Translates to: WCQTSSRSYTLLGAPAAAPCAIP*WGPHSP
Trigger: CGGTGAGTGTGGCCCCCACAATGGGATGGCGCAGGG...GGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS TCA 90 bp ACTGGACACGTCCCGAGCCGCGGCCGGACATTGGCTCAGGGCCTGTaGCGCGAGGGTGTCAAGCTCCTCCAGGTCGTCGGCAGTGAAGTC +
Preference number: 5 (lower is better)
Translates to: TGHVPSRGRTLAQGL*REGVKLLQVVGSEV
Trigger: GACTTCACTGCCGACGACCTGGAGGAGCTTGACACCCTCGCGTCACAGGCCCTGAGCCAATGTCCGGCCGCGGCTCGGGACGTGTCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000346691.9
ENST00000635464.1
CDS-3UTR CAA 90 bp CCTGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGCCTGCGAGCCCATGGTaGGGTACGTACCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PAPGGPQRPSKIHSCGLLPASPW*GTYLLL
Trigger: CAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGG...CAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp CCTCTGCTGGTCGGTCCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGACTGAGTCCTCAGGGTaGGTCTCTACCCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: PLLVGPWGSPCPPHCQPLTESSG*VSTPEL
Trigger: GAGCTCTGGGGTAGAGACCAACCCTGAGGACTCAGT...CAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CAA 90 bp CCTCTGCTGGTCGGTCCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGGAGCCACACCACCTCTaGTTCCAGCTGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: PLLVGPWGSPCPPHCQPLEPHHL*FQLEPL
Trigger: CAATGGCTCCAGCTGGAACAAGAGGTGGTGTGGCTC...CAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp TGCATGGGCCCCGGGGGCAGGGCCTGCGAGCCCATGGTTGGGTACGTACCTGCTGCAGATGGTCTTGGCTaGGTCCTAGCAGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: CMGPGGRACEPMVGYVPAADGLG*VLAEAV
Trigger: CACAGCCTCTGCTAGGACCAAGCCAAGACCATCTGC...AGCAGGTACGTACCCAACCATGGGCTCGCAGGCCCTGCCCCCGGGGCCCATGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGGGCTCGCTCCGCCTCTaGCTGCCTGGCGCGGAGGTC +
Preference number: 5 (lower is better)
Translates to: GEGQASGLHVEKDEGLHGGSLRL*LPGAEV
Trigger: GACCTCCGCGCCAGGCAGCAAGAGGCGGAGCGAGCC...CCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CAA 90 bp CTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCTGCCCACCAGAGGCTaGTATCCTGACTCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: LVVVRQQGEELNSQQHARLPTRG*YPDSVW
Trigger: CCAGACGGAGTCAGGATACAAGCCTCTGGTGGGCAG...CCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp TCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGGTTCTGAGGGGCTGCTaGCTCGCTCCAGGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SRAHLWTASRHSSVTLGWVLRGC*LAPGPS
Trigger: TGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAAC...CCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS GCA 90 bp GTCCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGTCTGTaGAACATCACCGTGAGCGCTCTGACCACCTCTTGTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VLGGPPALRTVSHCL*NITVSALTTSCSSW
Trigger: CCAGCTGGAACAAGAGGTGGTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000346691.9
CDS-3UTR CAA 90 bp TTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAAGCGCCGAGCTAGACTaGCCTGCCGCCAGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: FLKADQLPWGRAQQQPGTSAELD*PAARPE
Trigger: CTCCGGCCTGGCGGCAGGCAAGTCTAGCTCGGCGCT...TGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320211.10
CDS-3UTR CAA 90 bp GGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACACTGCCCACCAGAGGCTaGTATCCTGACTCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: GPGHHPQPCASLEGTAHTLPTRG*YPDSVW
Trigger: CCAGACGGAGTCAGGATACAAGCCTCTGGTGGGCAG...TGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGAGCCACACCACCTCTaGTTCCAGCTGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: GQWCQTSSRSYTLLGAPAEPHHL*FQLEPL
Trigger: CAATGGCTCCAGCTGGAACAAGAGGTGGTGTGGCTC...AGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGAACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTGAGCCACACCACCTCTaGTTCCAGCTGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: GNRAEVPAGRGPPAGRGAEPHHL*FQLEPL
Trigger: CAATGGCTCCAGCTGGAACAAGAGGTGGTGTGGCTC...AGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp ACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCACATTACACTGGCAGTaGGAGCCAGTGACTGGGGGC +
Preference number: 5 (lower is better)
Translates to: TRAVVPDQLPVLHTAGSPTLHWQ*EPVTGG
Trigger: GCCCCCAGTCACTGGCTCCAACTGCCAGTGTAATGT...GGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTACATTACACTGGCAGTaGGAGCCAGTGACTGGGGGC +
Preference number: 5 (lower is better)
Translates to: GQWCQTSSRSYTLLGAPATLHWQ*EPVTGG
Trigger: GCCCCCAGTCACTGGCTCCAACTGCCAGTGTAATGT...AGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTGCTGTGCATCATGAAGAGCTaGTCCTTCTGCGATAGGCCG +
Preference number: 5 (lower is better)
Translates to: AVQQQHRVPQTAHCPPLLCIMKS*SFCDRP
Trigger: CGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCA...CAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp TGCTCCCGGGGGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTCATAGCCAGCTCTGCTaGGAGCAGGGGGAAGTCGTA +
Preference number: 5 (lower is better)
Translates to: CSRGTPEAFQDPQLWPAGHSQLC*EQGEVV
Trigger: TACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATG...ACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCCCCCGGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp CCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCGCAGATGGTCTTGGCTaGGTCCTAGCAGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PAPGLTHCWEPLLRPFHAADGLG*VLAEAV
Trigger: CACAGCCTCTGCTAGGACCAAGCCAAGACCATCTGC...GGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp TCTGCGATAGGCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGGTCAGGACACTGGCTaGAAGGTGACCTGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: SAIGRAAAAPCPADSALSGQDTG*KVTCWQ
Trigger: CTGCCAACAGGTCACCTTCAAGCCAGTGTCCTGACC...GGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CAA 90 bp CAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGCTGCCCACCAGAGGCTaGTATCCTGACTCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: QRPSKIHSCGLLVAQCTGLPTRG*YPDSVW
Trigger: CCAGACGGAGTCAGGATACAAGCCTCTGGTGGGCAG...CCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAACTGAGTCCTCAGGGTaGGTCTCTACCCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: GPGHHPQPCASLEGTAHTTESSG*VSTPEL
Trigger: GAGCTCTGGGGTAGAGACCAACCCTGAGGACTCAGT...TGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CAA 90 bp CAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCAACTGAGTCCTCAGGGTaGGTCTCTACCCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: QTSSRSYTLLGAPAAALSTESSG*VSTPEL
Trigger: GAGCTCTGGGGTAGAGACCAACCCTGAGGACTCAGT...TGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CAA 90 bp AGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCAACATTACACTGGCAGTaGGAGCCAGTGACTGGGGGC +
Preference number: 5 (lower is better)
Translates to: SSRSYTLLGAPAAALSCPTLHWQ*EPVTGG
Trigger: GCCCCCAGTCACTGGCTCCAACTGCCAGTGTAATGT...TGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACACTCACATTACACTGGCAGTaGGAGCCAGTGACTGGGGGC +
Preference number: 5 (lower is better)
Translates to: GVVLVPPCGWTLRASATLTLHWQ*EPVTGG
Trigger: GCCCCCAGTCACTGGCTCCAACTGCCAGTGTAATGT...GAGTGTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp ATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATCCCAGCCACTCACCTGCGAGCCCATGGTaGGGTACGTACCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MGTGSATARDRKKDPSHSPASPW*GTYLLL
Trigger: CAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGG...TGAGTGGCTGGGATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GCCAGTGACTGGGGGCAAGGGGCTCTGCACACCAAGCTTAGCCAGGAGCCACACACACACAGGGAGAGCTaGTCTACCACACGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: ASDWGQGALHTKLSQEPHTHRES*STTRGG
Trigger: ACCACCGCGTGTGGTAGACAAGCTCTCCCTGTGTGT...GTGTGGCTCCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAAGTTCTGAGGGGCTGCTaGCTCGCTCCAGGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: GQGSFLKADQLPWGRAQQVLRGC*LAPGPS
Trigger: TGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAAC...TTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGCAGGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGGCTATAGCTCTTCCTaGGGCCGTGTTCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GRAGLLPQGRSVTMGTGSGYSSS*GRVLRG
Trigger: GCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCC...TGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCGGGGATCTGGCGCGGTaGACAACTCCCTCCGAGCAA +
Preference number: 5 (lower is better)
Translates to: APPLPLRQTDQTQETRPAGDLAR*TTPSEQ
Trigger: TTGCTCGGAGGGAGTTGTCAACCGCGCCAGATCCCC...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR CAA 90 bp GGCAGGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGAGGGGGTGGGCTGGTaGTGTTCACAGTTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GRAGLLPQGRSVTMGTGSEGVGW*CSQFSP
Trigger: TGGGGAGAACTGTGAACACAACCAGCCCACCCCCTC...TGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CAA 90 bp CGCCAGCAGGGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCAGGGGTGTCTCGCACTTTGGCAGCACTaGGAACACACACTGGAACCC +
Preference number: 5 (lower is better)
Translates to: RQQGEELNSQQHARQGCLALWQH*EHTLEP
Trigger: GGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGC...GAGACACCCCTGCCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCCCTGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CAA 90 bp GCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGCCTCTGCTGCTTGTCACTGAGTGCTaGGGTTTTCTCTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: AVQQQHRVPQTAHCPPLLLVTEC*GFLLLK
Trigger: CTTGAGCAAGAGAAAACCCAAGCACTCAGTGACAAG...CAGCAGAGGCGGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp ACCAGGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCGCACTTTGGCAGCACTaGGAACACACACTGGAACCT +
Preference number: 5 (lower is better)
Translates to: TRAVVPDQLPVLHTAGSPALWQH*EHTLEP
Trigger: AGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGC...GGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CAA 90 bp TCTGCGATAGGCCGTGCAGCAGCAGCACCGTGTCCCGCAGACAGCGCACTGTCCGCACTTTGGCAGCACTaGGAACACACACTGGAACCT +
Preference number: 5 (lower is better)
Translates to: SAIGRAAAAPCPADSALSALWQH*EHTLEP
Trigger: AGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGC...GGACAGTGCGCTGTCTGCGGGACACGGTGCTGCTGCTGCACGGCCTATCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CAA 90 bp TCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCTGGTTCCAGCTGGAGCCATaGTGTCTCCAAGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: SRAHLWTASRHSSVTLGWFQLEP*CLQGHS
Trigger: AGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAA...CCAGCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GCCAGTGACTGGGGGCAAGGGGCTCTGCACACCAAGCTTAGCCAGGAGCCACACTTCCAGCTGGAGCCATaGTGTCTCCAAGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: ASDWGQGALHTKLSQEPHFQLEP*CLQGHS
Trigger: AGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAA...GTGTGGCTCCTGGCTAAGCTTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp CCAGGGTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGCCTGCGAGCCCATGGTaGGGTACGTACCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PGSFTGGRSLVPLLSPRLPASPW*GTYLLL
Trigger: CAGCAGCAGGTACGTACCCAACCATGGGCTCGCAGG...CAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp TGGCCTGCTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGCAGCTGACACACAGGGAGAGCTaGTCTACCACACGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: WPAGGTMHRGHHTSDRQLTHRES*STTRGG
Trigger: ACCACCGCGTGTGGTAGACAAGCTCTCCCTGTGTGT...CAGCTGCCTGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp CACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGCTATAGCTCTTCCTaGGGCCGTGTTCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: HSCGLLVAQCTGAIIPVTGYSSS*GRVLRG
Trigger: GCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCC...TGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS CCA 90 bp CTGGACTCTCTGAAGGACTGCCCGGGGCACCGGTTCTCAGAGGCCTaGGCAATTCTTCTGCATATTACTCAGAGCCATGCAGGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: LDSLKDCPGHRFSEA*AILLHITQSHAGPC
Trigger: GCAGGGGCCTGCATGGCTCTGAGTAATATGCAGAAGAATTGCCCAGGCCTCTGAGAACCGGTGCCCCGGGCAGTCCTTCAGAGAGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635084.1
CDS-3UTR CAA 90 bp CCTCTGCTGGTCGGTCCTTGGGGGTCCCCCTGCCCTCCGCACTGTCAGCCACTGGAGAATTCCTTTTCCTaGTCACTGAGTGCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: PLLVGPWGSPCPPHCQPLENSFS*SLSAWV
Trigger: AACCCAAGCACTCAGTGACAAGGAAAAGGAATTCTC...CAGTGGCTGACAGTGCGGAGGGCAGGGGGACCCCCAAGGACCGACCAGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp CGCCAGCAGGGAGAGGAGCTCAACAGCCAGCAGCACGCTAGGCAGGGGTGTCTCGAGCAGCCAGTTTATTaGCTCGTTCACTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: RQQGEELNSQQHARQGCLEQPVY*LVHWSG
Trigger: TCCAGACCAGTGAACGAGCAAATAAACTGGCTGCTC...GAGACACCCCTGCCTAGCGTGCTGCTGGCTGTTGAGCTCCTCTCCCTGCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCCTGCCCACCAGAGGCTaGTATCCTGACTCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKALPTRG*YPDSVW
Trigger: CCAGACGGAGTCAGGATACAAGCCTCTGGTGGGCAG...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp CACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCATCATACCAGTGACAGGTCAGGACACTGGCTaGAAGGTGACCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: HSCGLLVAQCTGAIIPVTGQDTG*KVTCCC
Trigger: GCAGCAACAGGTCACCTTCAAGCCAGTGTCCTGACC...TGTCACTGGTATGATGGCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CAA 90 bp CTCTCCAGGGCACATCTGTGGACAGCCAGCAGGCACAGCTCCGTGACCTTGGGCGCACTTTGGCAGCACTaGGAACACACACTGGAACCT +
Preference number: 5 (lower is better)
Translates to: LSRAHLWTASRHSSVTLGALWQH*EHTLEP
Trigger: AGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGC...GCCCAAGGTCACGGAGCTGTGCCTGCTGGCTGTCCACAGATGTGCCCTGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CAA 90 bp AGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGGCGATTCCAGCTGGAGCCATaGTGTCTCCAAGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: RTSPSAVCESGGDCPYRRFQLEP*CLQGHS
Trigger: AGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAA...TCGCCTGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGGCAGATGGTCTTGGCTaGGTCCTAGCAGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPADGLG*VLAEAV
Trigger: CACAGCCTCTGCTAGGACCAAGCCAAGACCATCTGC...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTCTTGTCACTGAGTGCTaGGGTTTTCTCTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: GQWCQTSSRSYTLLGAPALVTEC*GFLLLK
Trigger: CTTGAGCAAGAGAAAACCCAAGCACTCAGTGACAAG...AGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CAA 90 bp CTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGGGTCGAGCAGCCAGTTTATTaGCTCGTTCACTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: LTHCWEPLLRPFHAHLWVEQPVY*LVHWSG
Trigger: TCCAGACCAGTGAACGAGCAAATAAACTGGCTGCTC...GACCCACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCACTGAGTCCTCAGGGTaGGTCTCTACCCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKATESSG*VSTPEL
Trigger: GAGCTCTGGGGTAGAGACCAACCCTGAGGACTCAGT...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR CAA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGGGTCAGGACACTGGCTaGAAGGTGACCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRGQDTG*KVTCCC
Trigger: GCAGCAACAGGTCACCTTCAAGCCAGTGTCCTGACC...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR CAA 90 bp CAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCGGTCAGGACACTGGCTaGAAGGTGACCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: QRSDAIHTEGTIQSTGEAGQDTG*KVTCCC
Trigger: GCAGCAACAGGTCACCTTCAAGCCAGTGTCCTGACC...GGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000634384.2
CDS-3UTR CAA 90 bp CTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGACATTACACTGGCAGTaGGAGCCAGTGACTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LLHPSHSAKQIRLRKQGQTLHWQ*EPVTGG
Trigger: GCCCCCAGTCACTGGCTCCAACTGCCAGTGTAATGT...CTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGGGCCCCGGTGCATCATGAAGAGCTaGTCCTTCTGCGATAGGCCG +
Preference number: 5 (lower is better)
Translates to: GQASGLHVEKDEGLHGPRCIMKS*SFCDRP
Trigger: CGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCA...CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp CCTGCCACACAATGGTTTCTTCCCATGGCCCCAGCCCAAAGCAATGACTCAGGAGTTCTGAGGGGCTGCTaGCTCGCTCCAGGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: PATQWFLPMAPAQSNDSGVLRGC*LAPGPS
Trigger: TGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAAC...TCCTGAGTCATTGCTTTGGGCTGGGGCCATGGGAAGAAACCATTGTGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACTTGAAGGTGACCTGTaGGCAGGAGGAATGTGTCGG +
Preference number: 5 (lower is better)
Translates to: GQGSFLKADQLPWGRAQQLEGDL*AGGMCR
Trigger: CCGACACATTCCTCCTGCCAACAGGTCACCTTCAAG...TTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CAA 90 bp AACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAAGAGCAGCCAGTTTATTaGCTCGTTCACTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: NRAEVPAGRGPPAGRGAQEQPVY*LVHWSG
Trigger: TCCAGACCAGTGAACGAGCAAATAAACTGGCTGCTC...TTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp AGATCAGTTACCATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATCTGCCCACCAGAGGCTaGTATCCTGACTCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: RSVTMGTGSATARDRKKDLPTRG*YPDSVW
Trigger: CCAGACGGAGTCAGGATACAAGCCTCTGGTGGGCAG...ATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCATGGTAACTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTGCTTTCTGGGCCTCTTCTaGTTTTATGGAGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: AVVPDQLPVLHTAGSPCCFLGLF*FYGVTS
Trigger: AGAGGTGACTCCATAAAACAAGAAGAGGCCCAGAAA...GCAGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGCAGTGGTGCCAGACCAGCTCCCGGTCTTACACACTGCTGGGAGCCCCTGCTTTTCTGGGCCTCTTCTaGTTTTATGGAGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: GQWCQTSSRSYTLLGAPAFLGLF*FYGVTS
Trigger: AGAGGTGACTCCATAAAACAAGAAGAGGCCCAGAAA...AGCAGGGGCTCCCAGCAGTGTGTAAGACCGGGAGCTGGTCTGGCACCACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAACAGCTTTCTGGGCCTCTTCTaGTTTTATGGAGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: ELRCQLVVVRQQGEELNSFLGLF*FYGVTS
Trigger: AGAGGTGACTCCATAAAACAAGAAGAGGCCCAGAAA...GCTGTTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCTTCCAGCTGGAGCCATaGTGTCTCCAAGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAFQLEP*CLQGHS
Trigger: AGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAA...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTGAGCCACACCACCTCTaGTTCCAGCTGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: VLHWRKILGTPALSKAGTEPHHL*FQLEPL
Trigger: CAATGGCTCCAGCTGGAACAAGAGGTGGTGTGGCTC...AGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGTGCATCATGAAGAGCTaGTCCTTCTGCGATAGGCCG +
Preference number: 5 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPCIMKS*SFCDRP
Trigger: CGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCA...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGCGCCGCAGGAAGGCTAGGAGCAGGTTGGCCAGGTTGTCATCAAAACATTGACACACACAGGGAGAGCTaGTCTACCACACGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: GAAGRLGAGWPGCHQNIDTHRES*STTRGG
Trigger: ACCACCGCGTGTGGTAGACAAGCTCTCCCTGTGTGT...GTCAATGTTTTGATGACAACCTGGCCAACCTGCTCCTAGCCTTCCTGCGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp CTTGGCTTGGTCCTAGCAGAGGCTGTGACCCCATACATGGGCCTGATGGTGCCGGTTGTCATCAAAACATaGACGCCCATGCGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LGLVLAEAVTPYMGLMVPVVIKT*TPMRCQ
Trigger: CTGGCAGCGCATGGGCGTCAATGTTTTGATGACAAC...CGGCACCATCAGGCCCATGTATGGGGTCACAGCCTCTGCTAGGACCAAGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGACCCCAGAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCAAGGCTAGGAGCAGGTaGGCCAGGTTGTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: GPQRPSKIHSCGLLVAQCKARSR*ARLSSK
Trigger: TTTTGATGACAACCTGGCCAACCTGCTCCTAGCCTT...GCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTCTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCCAGCATAGCCATAGCCAGCTCTGCTaGGAGCAGGGGGAAGTCGTA +
Preference number: 5 (lower is better)
Translates to: DAIHTEGTIQSTGEAQHSHSQLC*EQGEVV
Trigger: TACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATG...GCTATGCTGGGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTCATAGCCAGCTCTGCTaGGAGCAGGGGGAAGTCGTA +
Preference number: 5 (lower is better)
Translates to: VLHWRKILGTPALSKAGTHSQLC*EQGEVV
Trigger: TACGACTTCCCCCTGCTCCAAGCAGAGCTGGCTATG...AGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GGGCCAGGACATCACCCTCAGCCGTGTGCGAGTCTGGAGGGGACTGCCCATACAGAGAATTCCTTTTCCTaGTCACTGAGTGCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: GPGHHPQPCASLEGTAHTENSFS*SLSAWV
Trigger: AACCCAAGCACTCAGTGACAAGGAAAAGGAATTCTC...TGTATGGGCAGTCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CAA 90 bp GGAGCAGGGGGAAGTCGTAGCGGTCACCATTGTGTGCCACCAGGCACCAGGGCTGAGAATTCCTTTTCCTaGTCACTGAGTGCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: GAGGSRSGHHCVPPGTRAENSFS*SLSAWV
Trigger: AACCCAAGCACTCAGTGACAAGGAAAAGGAATTCTC...AGCCCTGGTGCCTGGTGGCACACAATGGTGACCGCTACGACTTCCCCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CAA 90 bp GCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCGAGCAGCCAGTTTATTaGCTCGTTCACTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: APPLPLRQTDQTQETRPAEQPVY*LVHWSG
Trigger: TCCAGACCAGTGAACGAGCAAATAAACTGGCTGCTC...GGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp ATGGGGACGGGCTCAGCAACAGCCAGGGACAGGAAGAAGGATCCCAGCCACTCAGAGCAGCCAGTTTATTaGCTCGTTCACTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: MGTGSATARDRKKDPSHSEQPVY*LVHWSG
Trigger: TCCAGACCAGTGAACGAGCAAATAAACTGGCTGCTC...TGAGTGGCTGGGATCCTTCTTCCTGTCCCTGGCTGTTGCTGAGCCCGTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCGCACTTTGGCAGCACTaGGAACACACACTGGAACCT +
Preference number: 5 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKAALWQH*EHTLEP
Trigger: AGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGC...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
CDS-3UTR CAA 90 bp GGCAGGGCTCCTTCCTCAAGGCAGATCAGTTACCATGGGGACGGGCTCAGCAACAAGGCTAGGAGCAGGTaGGCCAGGTTGTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: GRAPSSRQISYHGDGLSNKARSR*ARLSSK
Trigger: TTTTGATGACAACCTGGCCAACCTGCTCCTAGCCTT...GTTGCTGAGCCCGTCCCCATGGTAACTGATCTGCCTTGAGGAAGGAGCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp TGGAGCCATTGTGTCTCCAAGGCCACTCTGTCAGGCCGTGATGTGATGTACATGGGCTATAGCTCTTCCTaGGGCCGTGTTCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: WSHCVSKATLSGRDVMYMGYSSS*GRVLRG
Trigger: GCCCCTCAGAACACGGCCCAAGGAAGAGCTATAGCC...CATGTACATCACATCACGGCCTGACAGAGTGGCCTTGGAGACACAATGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS-3UTR CAA 90 bp CCAGGGTCCTTCACTGGAGGAAGATCCTTGGTACCCCTGCTCTCTCCAAGGCTGCAGTTCTCCCCAATCTaGCGGCTCTGGGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: PGSFTGGRSLVPLLSPRLQFSPI*RLWARN
Trigger: ATTTCTTGCCCAGAGCCGCAAGATTGGGGAGAACTG...CAGCCTTGGAGAGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS GCA 90 bp CTGCTTAAGCCACATACTTTGACTTCCCTGGACTCTCTGAAGGACTaGCCGGGGCACCGGTTCTCAGAGGCCTGGGCAATTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LLKPHTLTSLDSLKD*PGHRFSEAWAILLH
Trigger: ATGCAGAAGAATTGCCCAGGCCTCTGAGAACCGGTGCCCCGGGCAGTCCTTCAGAGAGTCCAGGGAAGTCAAAGTATGTGGCTTAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635084.1
CDS CCA 90 bp GCTGCCACTAAGCCCCAGGAAGATGCCTGTGGGTGCGGAAGGCTCTaGGACATACCTGCCCTTGGCCCTTTCCACTTTATAAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: AATKPQEDACGCGRL*DIPALGPFHFIKSS
Trigger: AGAAGACTTTATAAAGTGGAAAGGGCCAAGGGCAGGTATGTCCCAGAGCCTTCCGCACCCACAGGCATCTTCCTGGGGCTTAGTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635084.1
CDS-3UTR CAA 90 bp CGGTCTTACACACTGCTGGGAGCCCCTGCTGCGGCCCTTTCATGCCCACCTGTGCACTGGTCTGGAGCTTaGTCCTTAATTCATTCATCT +
Preference number: 5 (lower is better)
Translates to: RSYTLLGAPAAALSCPPVHWSGA*SLIHSS
Trigger: AGATGAATGAATTAAGGACAAAGCTCCAGACCAGTG...CACAGGTGGGCATGAAAGGGCCGCAGCAGGGGCTCCCAGCAGTGTGTAAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp GAGGCCTTCCAAGATCCACAGCTGTGGCCTGCTGGTGGCACAATGCACCGGGGCCACTGGTCTGGAGCTTaGTCCTTAATTCATTCATCT +
Preference number: 5 (lower is better)
Translates to: EAFQDPQLWPAGGTMHRGHWSGA*SLIHSS
Trigger: AGATGAATGAATTAAGGACAAAGCTCCAGACCAGTG...GCCCCGGTGCATTGTGCCACCAGCAGGCCACAGCTGTGGATCTTGGAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp TCAGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAGAGCCACACCACCTCTaGTTCCAGCTGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: SGNKASQFSGQFLLVTALEPHHL*FQLEPL
Trigger: CAATGGCTCCAGCTGGAACAAGAGGTGGTGTGGCTC...TAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp TGGCCAGGTTGTCATCAAAACATTGACGCCCATGCGCTGCCAGCACAGCTGTGCGTTGTCATCAAAACATaGACGCCCATGCGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: WPGCHQNIDAHALPAQLCVVIKT*TPMRCQ
Trigger: CTGGCAGCGCATGGGCGTCAATGTTTTGATGACAAC...GCACAGCTGTGCTGGCAGCGCATGGGCGTCAATGTTTTGATGACAACCTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCCTTGTCACTGAGTGCTaGGGTTTTCTCTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKALVTEC*GFLLLK
Trigger: CTTGAGCAAGAGAAAACCCAAGCACTCAGTGACAAG...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS TCA 90 bp GCAGGCCCCTGCAGGAGAAGCAGGGATTCTGGTACCTTGAGTGTTTaGTCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: AGPCRRSRDSGTLSV*SLSPAVNKAFLGLF
Trigger: GAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACACTCAAGGTACCAGAATCCCTGCTTCTCCTGCAGGGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635084.1
CDS GCA 90 bp GTGGACCTTATGATCACCTGTGTCTGGCTCCTCCCATGCTCACACTaGCCAAGGGAGACAGTGGGCTTCATAAGATCTAAAGCCGCTCAA +
Preference number: 5 (lower is better)
Translates to: VDLMITCVWLLPCSH*PRETVGFIRSKAAQ
Trigger: TTGAGCGGCTTTAGATCTTATGAAGCCCACTGTCTCCCTTGGGCAGTGTGAGCATGGGAGGAGCCAGACACAGGTGATCATAAGGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS-3UTR CAA 90 bp ATCCTTGGTACCCCTGCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCTTGTCACTGAGTGCTaGGGTTTTCTCTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: ILGTPALSKAGTSVPGCGLVTEC*GFLLLK
Trigger: CTTGAGCAAGAGAAAACCCAAGCACTCAGTGACAAG...GCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGCAGGGGTACCAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CAA 90 bp GGTCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGGAGAATTCCTTTTCCTaGTCACTGAGTGCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: GPAPPLPLRQTDQTQETRENSFS*SLSAWV
Trigger: AACCCAAGCACTCAGTGACAAGGAAAAGGAATTCTC...CCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR CAA 90 bp GGAGTGGTGCTGGTGCCACCATGTGGCTGGACACTCAGGGCCTCAGCCACACTCAATGATTGGAGCTTTTaGGAGAATTCCTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GVVLVPPCGWTLRASATLNDWSF*ENSFSL
Trigger: CAAGGAAAAGGAATTCTCCAAAAAGCTCCAATCATT...GAGTGTGGCTGAGGCCCTGAGTGTCCAGCCACATGGTGGCACCAGCACCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp GTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGGCTGCCACTGGTCTGGAGCTTaGTCCTTAATTCATTCATCT +
Preference number: 5 (lower is better)
Translates to: VVLRPDIPAKVLPNPGGCHWSGA*SLIHSS
Trigger: AGATGAATGAATTAAGGACAAAGCTCCAGACCAGTG...GCAGCCACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CAA 90 bp GCTCTCTCCAAGGCTGGGACTAGTGTTCCTGGTTGTGGCCAGGTGTGCAGTGGTTTTCTGGGCCTCTTCTaGTTTTATGGAGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: ALSKAGTSVPGCGQVCSGFLGLF*FYGVTS
Trigger: AGAGGTGACTCCATAAAACAAGAAGAGGCCCAGAAA...ACCACTGCACACCTGGCCACAACCAGGAACACTAGTCCCAGCCTTGGAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp AGGCACTTTGGCAGCACTTGGAACACACACTGGAACCTGGGCAAGAAATCACAGTTCCAGCTGGAGCCATaGTGTCTCCAAGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: RHFGSTWNTHWNLGKKSQFQLEP*CLQGHS
Trigger: AGAGTGGCCTTGGAGACACAATGGCTCCAGCTGGAA...CTGTGATTTCTTGCCCAGGTTCCAGTGTGTGTTCCAAGTGCTGCCAAAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CAA 90 bp CACCTGGTCAAACTGATGCAGGACCTCCACGCAGTGCATCATGAAGAGCTTGTCTGCATCATGAAGAGCTaGTCCTTCTGCGATAGGCCG +
Preference number: 5 (lower is better)
Translates to: HLVKLMQDLHAVHHEELVCIMKS*SFCDRP
Trigger: CGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCA...GACAAGCTCTTCATGATGCACTGCGTGGAGGTCCTGCATCAGTTTGACCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp GAACCTGTGGTCCTGAGGCCTGACATTCCAGCCAAGGTACTGCCAAACCCTGGTGAGAATTCCTTTTCCTaGTCACTGAGTGCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: EPVVLRPDIPAKVLPNPGENSFS*SLSAWV
Trigger: AACCCAAGCACTCAGTGACAAGGAAAAGGAATTCTC...ACCAGGGTTTGGCAGTACCTTGGCTGGAATGTCAGGCCTCAGGACCACAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CAA 90 bp AACAGAGCTGAGGTGCCAGCTGGTCGTGGTCCGCCAGCAGGGAGAGGAGCTCAAAATGATTGGAGCTTTTaGGAGAATTCCTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: NRAEVPAGRGPPAGRGAQNDWSF*ENSFSL
Trigger: CAAGGAAAAGGAATTCTCCAAAAAGCTCCAATCATT...TTGAGCTCCTCTCCCTGCTGGCGGACCACGACCAGCTGGCACCTCAGCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635464.1
ENST00000639561.1
CDS-3UTR CAA 90 bp CCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCACACTGGTCTGGAGCTTaGTCCTTAATTCATTCATCT +
Preference number: 5 (lower is better)
Translates to: PAPPLPLRQTDQTQETRPHWSGA*SLIHSS
Trigger: AGATGAATGAATTAAGGACAAAGCTCCAGACCAGTG...TGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp ACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAGCCAGTTCTTTCTGGGCCTCTTCTaGTTTTATGGAGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: TPPTPPNRSDSGNKASQFFLGLF*FYGVTS
Trigger: AGAGGTGACTCCATAAAACAAGAAGAGGCCCAGAAA...GAACTGGCTGGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS-3UTR CAA 90 bp AGGAAACAAGGCCAGCCAGTTCTCTGGGCAGTTCCTGCTGGTCACTGCTTTAATTGCATCATGAAGAGCTaGTCCTTCTGCGATAGGCCG +
Preference number: 5 (lower is better)
Translates to: RKQGQPVLWAVPAGHCFNCIMKS*SFCDRP
Trigger: CGGCCTATCGCAGAAGGACAAGCTCTTCATGATGCA...ATTAAAGCAGTGACCAGCAGGAACTGCCCAGAGAACTGGCTGGCCTTGTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000634384.2
ENST00000635464.1
CDS CCA 90 bp GGAAGATGCCTGTGGGTGCGGAAGGCTCTGGGACATACCTGCCCTTaGCCCTTTCCACTTTATAAAGTCTTCTGCTTAAGCCACATACTT +
Preference number: 5 (lower is better)
Translates to: GRCLWVRKALGHTCP*PFPLYKVFCLSHIL
Trigger: AAGTATGTGGCTTAAGCAGAAGACTTTATAAAGTGGAAAGGGCCAAGGGCAGGTATGTCCCAGAGCCTTCCGCACCCACAGGCATCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635084.1
CDS-3UTR CAA 90 bp CAGCGCAGTGATGCTATCCACACAGAAGGCACCATCCAGAGCACTGGTGAGGCCTCCCTGAAGGATTTTTaGACATGCCATCTAATAATC +
Preference number: 5 (lower is better)
Translates to: QRSDAIHTEGTIQSTGEASLKDF*TCHLII
Trigger: GATTATTAGATGGCATGTCAAAAAATCCTTCAGGGA...GGCCTCACCAGTGCTCTGGATGGTGCCTTCTGTGTGGATAGCATCACTGCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CAA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCTCCCTGAAGGATTTTTaGACATGCCATCTAATAATC +
Preference number: 5 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKASLKDF*TCHLII
Trigger: GATTATTAGATGGCATGTCAAAAAATCCTTCAGGGA...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR CAA 90 bp TCCTGCTCCACCCCTCCCACTCCGCCAAACAGATCAGACTCAGGAAACAAGGCCAATGATTGGAGCTTTTaGGAGAATTCCTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SCSTPPTPPNRSDSGNKANDWSF*ENSFSL
Trigger: CAAGGAAAAGGAATTCTCCAAAAAGCTCCAATCATT...GGCCTTGTTTCCTGAGTCTGATCTGTTTGGCGGAGTGGGAGGGGTGGAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000412052.4
ENST00000635464.1
CDS-3UTR CAA 90 bp TCAGACTGTGGGGCTTACTATCCTCTCTGCCCACCAGAGGCTTGTATCCTGACTCACTGGTCTGGAGCTTaGTCCTTAATTCATTCATCT +
Preference number: 5 (lower is better)
Translates to: SDCGAYYPLCPPEACILTHWSGA*SLIHSS
Trigger: AGATGAATGAATTAAGGACAAAGCTCCAGACCAGTG...AGTCAGGATACAAGCCTCTGGTGGGCAGAGAGGATAGTAAGCCCCACAGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CAA 90 bp TGGGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGATGAGGGTCTGCATGAATGATTGGAGCTTTTaGGAGAATTCCTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: WEKGKPVASMSKKMRVCMNDWSF*ENSFSL
Trigger: CAAGGAAAAGGAATTCTCCAAAAAGCTCCAATCATT...CATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000635464.1
CDS-3UTR CAA 90 bp CGTTCACTGGTCTGGAGCTTTGTCCTTAATTCATTCATCTCTGCATCTTTAAACGGTCAGGACACTGGCTaGAAGGTGACCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RSLVWSFVLNSFISASLNGQDTG*KVTCCC
Trigger: GCAGCAACAGGTCACCTTCAAGCCAGTGTCCTGACC...GTTTAAAGATGCAGAGATGAATGAATTAAGGACAAAGCTCCAGACCAGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639561.1
CDS-3UTR CAA 90 bp GGATCAAAGGCTGCTTCAGGAGCAGGTTTATCAAAATGGAACCTTGAGTGTTTGGAGCAGCCAGTTTATTaGCTCGTTCACTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: GSKAASGAGLSKWNLECLEQPVY*LVHWSG
Trigger: TCCAGACCAGTGAACGAGCAAATAAACTGGCTGCTC...CAAACACTCAAGGTTCCATTTTGATAAACCTGCTCCTGAAGCAGCCTTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CAA 90 bp GGATCAAAGGCTGCTTCAGGAGCAGGTTTATCAAAATGGAACCTTGAGTGTTTGCTTGTCACTGAGTGCTaGGGTTTTCTCTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: GSKAASGAGLSKWNLECLLVTEC*GFLLLK
Trigger: CTTGAGCAAGAGAAAACCCAAGCACTCAGTGACAAG...CAAACACTCAAGGTTCCATTTTGATAAACCTGCTCCTGAAGCAGCCTTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CAA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTTTTCTGGGCCTCTTCTaGTTTTATGGAGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVFLGLF*FYGVTS
Trigger: AGAGGTGACTCCATAAAACAAGAAGAGGCCCAGAAA...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS-3UTR CAA 90 bp TGTTTGATCTCTGTCTCCAGCTGTCAACAAAGCTTTTCTGGGCCTCTTCTTGTTAATGATTGGAGCTTTTaGGAGAATTCCTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: CLISVSSCQQSFSGPLLVNDWSF*ENSFSL
Trigger: CAAGGAAAAGGAATTCTCCAAAAAGCTCCAATCATT...AACAAGAAGAGGCCCAGAAAAGCTTTGTTGACAGCTGGAGACAGAGATCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635082.1
ENST00000639561.1
CDS CCA 72 bp GCGAGGCGCCGGGGGCTCGCTCCGCCTCTTGCTGCCTaGCGCGGAGGTCCCCGCCATGCTTTCCGCTCACCC +
Preference number: 6 (lower is better)
Translates to: ARRRGLAPPLAA*RGGPRHAFRSP
Trigger: GGGTGAGCGGAAAGCATGGCGGGGACCTCCGCGCCAGGCAGCAAGAGGCGGAGCGAGCCCCCGGCGCCTCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000346691.9
CDS CCA 72 bp GCCGAGCTAGACTTGCCTGCCGCCAGGCCGGAGAACTaGACCAACCGTCCGCGCGCCGCCGCTTGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: AELDLPAARPEN*TNRPRAAACLR
Trigger: GCGGAGGCAAGCGGCGGCGCGCGGACGGTTGGTCCAGTTCTCCGGCCTGGCGGCAGGCAAGTCTAGCTCGGC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000346691.9
CDS TCA 72 bp GTCCCGAGCCGCGGCCGGACATTGGCTCAGGGCCTGTaGCGCGAGGGTGTCAAGCTCCTCCAGGTCGTCGGC +
Preference number: 6 (lower is better)
Translates to: VPSRGRTLAQGL*REGVKLLQVVG
Trigger: GCCGACGACCTGGAGGAGCTTGACACCCTCGCGTCACAGGCCCTGAGCCAATGTCCGGCCGCGGCTCGGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320211.10
ENST00000346691.9
ENST00000635464.1
CDS CAA 90 bp CATGCTTTCCGCTCACCCCAAGTATCCGACAGCGCCGAGCTAGACTaGCCTGCCGCCAGGCCGGAGAACTGGACCAACCGTCCGCGCGCC +
Preference number: 6 (lower is better)
Translates to: HAFRSPQVSDSAELD*PAARPENWTNRPRA
Trigger: GGCGCGCGGACGGTTGGTCCAGTTCTCCGGCCTGGCGGCAGGCAAGTCTAGCTCGGCGCTGTCGGATACTTGGGGTGAGCGGAAAGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000346691.9
CDS GCA 72 bp ACCCCAAGTATCCGACAGCGCCGAGCTAGACTTGCCTaGCGCCAGGCCGGAGAACTGGACCAACCGTCCGCG +
Preference number: 6 (lower is better)
Translates to: TPSIRQRRARLA*RQAGELDQPSA
Trigger: CGCGGACGGTTGGTCCAGTTCTCCGGCCTGGCGGCAGGCAAGTCTAGCTCGGCGCTGTCGGATACTTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000346691.9
CDS CAA 72 bp CGCTCACCCCAAGTATCCGACAGCGCCGAGCTAGACTaGCCTGCCGCCAGGCCGGAGAACTGGACCAACCGT +
Preference number: 6 (lower is better)
Translates to: RSPQVSDSAELD*PAARPENWTNR
Trigger: ACGGTTGGTCCAGTTCTCCGGCCTGGCGGCAGGCAAGTCTAGCTCGGCGCTGTCGGATACTTGGGGTGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320211.10
ENST00000346691.9
CDS TCA 72 bp TCCGAAGCCACAGCCATCAAGGGGATCTGGCGCGGTTaGCAACTCCCTCCGAGCAAAAGGCCGCGAGGAGCA +
Preference number: 6 (lower is better)
Translates to: SEATAIKGIWRG*QLPPSKRPRGA
Trigger: TGCTCCTCGCGGCCTTTTGCTCGGAGGGAGTTGTCAACCGCGCCAGATCCCCTTGATGGCTGTGGCTTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS GCA 72 bp GGTCCCCCTGCCCTCCGCACTGTCAGCCACTGTCTGTaGAACATCACCGTGAGCGCTCTGACCACCTCTTGT +
Preference number: 6 (lower is better)
Translates to: GPPALRTVSHCL*NITVSALTTSC
Trigger: ACAAGAGGTGGTCAGAGCGCTCACGGTGATGTTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000346691.9
CDS CAA 72 bp TTCCGAAGCCACAGCCATCAAGGGGATCTGGCGCGGTaGACAACTCCCTCCGAGCAAAAGGCCGCGAGGAGC +
Preference number: 6 (lower is better)
Translates to: FRSHSHQGDLAR*TTPSEQKAARS
Trigger: GCTCCTCGCGGCCTTTTGCTCGGAGGGAGTTGTCAACCGCGCCAGATCCCCTTGATGGCTGTGGCTTCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS TCA 72 bp CTTGAAGGTGACCTGTTGGCAGGAGGAATGTGTCGGTaGGTCCCCAGGTGCTCCGCTTCTCTTAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LEGDLLAGGMCR*VPRCSASLSSC
Trigger: GCAGCTGCTAAGAGAAGCGGAGCACCTGGGGACTCACCGACACATTCCTCCTGCCAACAGGTCACCTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS GCA 72 bp CCACATACTTTGACTTCCCTGGACTCTCTGAAGGACTaGCCGGGGCACCGGTTCTCAGAGGCCTGGGCAATT +
Preference number: 6 (lower is better)
Translates to: PHTLTSLDSLKD*PGHRFSEAWAI
Trigger: AATTGCCCAGGCCTCTGAGAACCGGTGCCCCGGGCAGTCCTTCAGAGAGTCCAGGGAAGTCAAAGTATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635084.1
CDS CCA 72 bp CTGAAGGACTGCCCGGGGCACCGGTTCTCAGAGGCCTaGGCAATTCTTCTGCATATTACTCAGAGCCATGCA +
Preference number: 6 (lower is better)
Translates to: LKDCPGHRFSEA*AILLHITQSHA
Trigger: TGCATGGCTCTGAGTAATATGCAGAAGAATTGCCCAGGCCTCTGAGAACCGGTGCCCCGGGCAGTCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635084.1
CDS CCA 72 bp AAGCCCCAGGAAGATGCCTGTGGGTGCGGAAGGCTCTaGGACATACCTGCCCTTGGCCCTTTCCACTTTATA +
Preference number: 6 (lower is better)
Translates to: KPQEDACGCGRL*DIPALGPFHFI
Trigger: TATAAAGTGGAAAGGGCCAAGGGCAGGTATGTCCCAGAGCCTTCCGCACCCACAGGCATCTTCCTGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635084.1
CDS GCA 72 bp GTGGACCTTATGATCACCTGTGTCTGGCTCCTCCCATaGTCACACTGCCCAAGGGAGACAGTGGGCTTCATA +
Preference number: 6 (lower is better)
Translates to: VDLMITCVWLLP*SHCPRETVGFI
Trigger: TATGAAGCCCACTGTCTCCCTTGGGCAGTGTGAGCATGGGAGGAGCCAGACACAGGTGATCATAAGGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412052.4
CDS CAA 72 bp CACCAAAACCTTAAGGCACTGGGTCAGGACACTGGCTaGAAGGTGACCTGTTGGCAGGAGGAATGTGTCGGT +
Preference number: 6 (lower is better)
Translates to: HQNLKALGQDTG*KVTCWQEECVG
Trigger: ACCGACACATTCCTCCTGCCAACAGGTCACCTTCAAGCCAGTGTCCTGACCCAGTGCCTTAAGGTTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635464.1
CDS CCA 72 bp CTGTGGGTGCGGAAGGCTCTGGGACATACCTGCCCTTaGCCCTTTCCACTTTATAAAGTCTTCTGCTTAAGC +
Preference number: 6 (lower is better)
Translates to: LWVRKALGHTCP*PFPLYKVFCLS
Trigger: GCTTAAGCAGAAGACTTTATAAAGTGGAAAGGGCCAAGGGCAGGTATGTCCCAGAGCCTTCCGCACCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635084.1
CDS GCA 72 bp ATGATCACCTGTGTCTGGCTCCTCCCATGCTCACACTaGCCAAGGGAGACAGTGGGCTTCATAAGATCTAAA +
Preference number: 6 (lower is better)
Translates to: MITCVWLLPCSH*PRETVGFIRSK
Trigger: TTTAGATCTTATGAAGCCCACTGTCTCCCTTGGGCAGTGTGAGCATGGGAGGAGCCAGACACAGGTGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412052.4