Pregenerated sensors for ATRAID (Homo sapiens)
Ensembl gene IDs: ENSG00000138085Ensembl transcript IDs: ENST00000380171.8, ENST00000405489.7, ENST00000419744.1, ENST00000472515.1, ENST00000484646.1, ENST00000491220.1, ENST00000611786.4
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTaGGGCGAATCCACTGGCGAAAGATGCCTTTCTAGGAAGCAGAGC | + |
Preference number: 1 (lower is better) Translates to: TKGVQFFIFQWRPQP*GESTGERCLSRKQS Trigger: GCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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3UTR GCA 90 bp | GGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTaGAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAAT | + |
Preference number: 1 (lower is better) Translates to: GNNTNGNWYLSTPRE*NFSSSNGGLNLEAN Trigger: ATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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3UTR-3UTR TCA 90 bp | GCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTTGGCGGCCTCAACCTTaGGGCGAATCCACTGGCGAA | + |
Preference number: 2 (lower is better) Translates to: ATTPMGTGICLHQGSAIFWRPQP*GESTGE Trigger: TTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCA...AAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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3UTR-3UTR GCA 90 bp | ATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTCCACTGGCGAAAGATaGCTTTCTAGGAAGCAGAGC | + |
Preference number: 2 (lower is better) Translates to: ICLHQGSAIFHLPMAASTSTGER*LSRKQS Trigger: GCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGA...GGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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3UTR-3UTR CCA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGCAGAGCTCCCTGACTaGGCTAAGATAGTTCAGATT | + |
Preference number: 2 (lower is better) Translates to: NFSSSNGGLNLEANPLAKAELPD*AKIVQI Trigger: AATCTGAACTATCTTAGCCCAGTCAGGGAGCTCTGC...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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3UTR-3UTR CCA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGGCAGAGCTCCCTGACTaGGCTAAGATAGTTCAGATT | + |
Preference number: 2 (lower is better) Translates to: CLHQGSAIFHLPMAASTLAELPD*AKIVQI Trigger: AATCTGAACTATCTTAGCCCAGTCAGGGAGCTCTGC...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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3UTR-3UTR CCA 90 bp | TATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACGCAGAGCTCCCTGACTaGGCTAAGATAGTTCAGATT | + |
Preference number: 2 (lower is better) Translates to: YLSTPRECNFSSSNGGLNAELPD*AKIVQI Trigger: AATCTGAACTATCTTAGCCCAGTCAGGGAGCTCTGC...GTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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3UTR-3UTR CAA 90 bp | GGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTATGGCGGCCTCAACCTaGAGGCGAATCCACTGGCGA | + |
Preference number: 3 (lower is better) Translates to: GNNTNGNWYLSTPRECNFMAAST*RRIHWR Trigger: TCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCAT...AAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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3UTR GCA 72 bp | ACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTaGAATTTTTCATCTTCCAATGGCGGCCTCAACCTT | + |
Preference number: 3 (lower is better) Translates to: TNGNWYLSTPRE*NFSSSNGGLNL Trigger: AAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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3UTR CCA 72 bp | AAAGTGTTTATTATAGGCAACAACACCAATGGGAACTaGTATTTGTCTACACCAAGGGAGTGCAATTTTTCA | + |
Preference number: 3 (lower is better) Translates to: KVFIIGNNTNGN*YLSTPRECNFS Trigger: TGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTATAATAAACACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTAGAAGGGGGAGCCGCTaGCGAGCGCGACGCACGGCT | + |
Preference number: 4 (lower is better) Translates to: SSNGGLNLEANPLAKDAFRRGSR*RARRTA Trigger: AGCCGTGCGTCGCGCTCGCCAGCGGCTCCCCCTTCT...AAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR CCA 90 bp | AGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCCTCTTCCCCGGGCGTaGCCTAAGCGGCCCGGTCCA | + |
Preference number: 4 (lower is better) Translates to: SAIFHLPMAASTLRRIHWPLPRA*PKRPGP Trigger: TGGACCGGGCCGCTTAGGCCACGCCCGGGGAAGAGG...CCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | GGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTTTCCGTTCCCTTGGTaGTCCGCTGCTCGCGCGACC | + |
Preference number: 4 (lower is better) Translates to: GSAIFHLPMAASTLRRIHFPFPW*SAARAT Trigger: GGTCGCGCGAGCAGCGGAGCACCAAGGGAACGGAAA...GTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAGGAAGCAGAGCTCGTGGAGCTCTGCGCTaGTCTTCATGCGCCCTAGCC | + |
Preference number: 4 (lower is better) Translates to: LNLEANPLAKDAFLGSRARGALR*SSCALA Trigger: GGCTAGGGCGCATGAAGACCAGCGCAGAGCTCCACG...AGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGCCGGTCCAGTCGCCCTaGGGCTGCTTGGGGGCTTTT | + |
Preference number: 4 (lower is better) Translates to: ECNFSSSNGGLNLEANPLPVQSP*GCLGAF Trigger: AAAAGCCCCCAAGCAGCCCCAGGGCGACTGGACCGG...CAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | CTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAGGAAGCAGAGCTCTTGGGGGCTTTTCCTaGTCGTGGAGCTCTGCGCTG | + |
Preference number: 4 (lower is better) Translates to: LNLEANPLAKDAFLGSRALGGFS*SWSSAL Trigger: CAGCGCAGAGCTCCACGAGCAGGAAAAGCCCCCAAG...AGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | CAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCTTTCCGTTCCCTTGGTaGTCCGCTGCTCGCGCGACC | + |
Preference number: 4 (lower is better) Translates to: QGSAIFHLPMAASTLRRIFPFPW*SAARAT Trigger: GGTCGCGCGAGCAGCGGAGCACCAAGGGAACGGAAA...GATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | TCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTACCAGCCCCAAGATGGTaGCCTTCTGATTCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: SNGGLNLEANPLAKDAFLPAPRW*PSDSGS Trigger: GCTGCCTGAATCAGAAGGGCACCATCTTGGGGCTGG...TAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGCCGGTCCAGTCGCCCTaGGGCTGCTTGGGGGCTTTT | + |
Preference number: 4 (lower is better) Translates to: CLHQGSAIFHLPMAASTLPVQSP*GCLGAF Trigger: AAAAGCCCCCAAGCAGCCCCAGGGCGACTGGACCGG...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTCCTCTTCCCCGGGCGTaGCCTAAGCGGCCCGGTCCA | + |
Preference number: 4 (lower is better) Translates to: GNNTNGNWYLSTPRECNFPLPRA*PKRPGP Trigger: TGGACCGGGCCGCTTAGGCCACGCCCGGGGAAGAGG...AAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCAGGGTGCATATCTGGCTaGGCAGGGTCGGGAAGCGTC | + |
Preference number: 4 (lower is better) Translates to: RECNFSSSNGGLNLEANPGCISG*AGSGSV Trigger: GACGCTTCCCGACCCTGCCCAGCCAGATATGCACCC...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR TCA 90 bp | AGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGAGACTACCCGGGTCGTaGGGCGCCATTTTCCGTTCC | + |
Preference number: 4 (lower is better) Translates to: SAIFHLPMAASTLRRIHWRLPGS*GAIFRS Trigger: GGAACGGAAAATGGCGCCTCACGACCCGGGTAGTCT...CCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | CAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCTGGCGGCCTCAACCTTaGGGCGAATCCACTGGCGAA | + |
Preference number: 4 (lower is better) Translates to: QGSAIFHLPMAASTLRRIWRPQP*GESTGE Trigger: TTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCA...GATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | TCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTTCCCTGGACATTGGGTaGATATCTCGGGTAGCGCCA | + |
Preference number: 4 (lower is better) Translates to: SSNGGLNLEANPLAKDAFSLDIG*ISRVAP Trigger: TGGCGCTACCCGAGATATGCACCCAATGTCCAGGGA...AAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | GGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACCCAGCCCCAAGATGGTaGCCTTCTGATTCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: GSAIFHLPMAASTLRRIHPAPRW*PSDSGS Trigger: GCTGCCTGAATCAGAAGGGCACCATCTTGGGGCTGG...GTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCAGCGCGACGCACGGCTaGCCAGCGACCCTGCTTCAG | + |
Preference number: 4 (lower is better) Translates to: GNWYLSTPRECNFSSSNGSATHG*PATLLQ Trigger: CTGAAGCAGGGTCGCTGGCCAGCCGTGCGTCGCGCT...GCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR TCA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAAGACTACCCGGGTCGTaGGGCGCCATTTTCCGTTCC | + |
Preference number: 4 (lower is better) Translates to: NFSSSNGGLNLEANPLAKRLPGS*GAIFRS Trigger: GGAACGGAAAATGGCGCCTCACGACCCGGGTAGTCT...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | TCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTGAAGAACATAAGCAGTaGGAACGAGCCCTGGCGCAT | + |
Preference number: 4 (lower is better) Translates to: SSNGGLNLEANPLAKDAFEEHKQ*ERALAH Trigger: ATGCGCCAGGGCTCGTTCTCACTGCTTATGTTCTTC...AAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | ATAGGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATCTTCCCGGAGCCGACTaGAGACTCCCTCAGCCCGGT | + |
Preference number: 4 (lower is better) Translates to: IGNNTNGNWYLSTPRECNLPGAD*RLPQPG Trigger: ACCGGGCTGAGGGAGTCTGCAGTCGGCTCCGGGAAG...ATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAACTGCGCTGGTCTTCATaGGCCCTAGCCCTCTTTCGG | + |
Preference number: 4 (lower is better) Translates to: NFSSSNGGLNLEANPLAKLRWSS*ALALFR Trigger: CCGAAAGAGGGCTAGGGCGCATGAAGACCAGCGCAG...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGCATTGGGTGCATATCTaGCTGGGCAGGGTCGGGAAG | + |
Preference number: 4 (lower is better) Translates to: ECNFSSSNGGLNLEANPLHWVHI*LGRVGK Trigger: CTTCCCGACCCTGCCCAGCCAGATATGCACCCAATG...CAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR CCA 90 bp | AGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGACGCTCCCTGGACATTaGGTGCATATCTGGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: SAIFHLPMAASTLRRIHWTLPGH*VHIWLG Trigger: GCCCAGCCAGATATGCACCCAATGTCCAGGGAGCGT...CCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR GCA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCACTTCCCGGAGCCGACTaGAGACTCCCTCAGCCCGGT | + |
Preference number: 4 (lower is better) Translates to: PMGTGICLHQGSAIFHLPLPGAD*RLPQPG Trigger: ACCGGGCTGAGGGAGTCTGCAGTCGGCTCCGGGAAG...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | CAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCAGGCAGCAACGGGCATaGAGCATTAGCTCTCGTGTC | + |
Preference number: 4 (lower is better) Translates to: QGSAIFHLPMAASTLRRIRQQRA*SISSRV Trigger: GACACGAGAGCTAATGCTGCATGCCCGTTGCTGCCT...GATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | TCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTATCCACTGGCGAAAGATaGCTTTCTAGGAAGCAGAGC | + |
Preference number: 4 (lower is better) Translates to: SNGGLNLEANPLAKDAFLSTGER*LSRKQS Trigger: GCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGA...TAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | ATAGGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATGCTGGCCAGCGACCCTaGTTCAGCCCGACCTCAAAC | + |
Preference number: 4 (lower is better) Translates to: IGNNTNGNWYLSTPRECNAGQRP*FSPTSN Trigger: GTTTGAGGTCGGGCTGAAGCAGGGTCGCTGGCCAGC...ATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR CCA 90 bp | TTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATCTCTTTCGGGGATACTaGCCGACCCCCTCTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: FSSSNGGLNLEANPLAKDLFRGY*PTPSSF Trigger: AAAGGAAGAGGGGGTCGGCCAGTATCCCCGAAAGAG...ATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTCTTTCGGGGATACTaGCCGACCCCCTCTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: RECNFSSSNGGLNLEANPLFRGY*PTPSSF Trigger: AAAGGAAGAGGGGGTCGGCCAGTATCCCCGAAAGAG...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTTGCCTGATGAAAGTTTaGACCAGGGTCCTCCAGAGA | + |
Preference number: 4 (lower is better) Translates to: SSNGGLNLEANPLAKDAFCLMKV*TRVLQR Trigger: TCTCTGGAGGACCCTGGTCCAAACTTTCATCAGGCA...AAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTATGCCTGATGAAAGTTTaGACCAGGGTCCTCCAGAGA | + |
Preference number: 4 (lower is better) Translates to: SNGGLNLEANPLAKDAFLCLMKV*TRVLQR Trigger: TCTCTGGAGGACCCTGGTCCAAACTTTCATCAGGCA...TAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAAGTGAGAACGAGCCCTaGCGCATACACTTGTATCCA | + |
Preference number: 4 (lower is better) Translates to: SNGGLNLEANPLAKDAFLSENEP*RIHLYP Trigger: TGGATACAAGTGTATGCGCCAGGGCTCGTTCTCACT...TAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATTGGAGACGGATAGAGTaGTGGCTCCCAGAATCCCGA | + |
Preference number: 4 (lower is better) Translates to: FSSSNGGLNLEANPLAKDWRRIE*WLPESR Trigger: TCGGGATTCTGGGAGCCACCACTCTATCCGTCTCCA...ATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGTTGGCTTTTCGGCGCTaGGTCGCCCAAAGCAGAATG | + |
Preference number: 4 (lower is better) Translates to: ECNFSSSNGGLNLEANPLLAFRR*VAQSRM Trigger: CATTCTGCTTTGGGCGACCCAGCGCCGAAAAGCCAA...CAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAAGATGGTGCCCTTCTaGTTCAGGCAGCAACGGGCA | + |
Preference number: 4 (lower is better) Translates to: CLHQGSAIFHLPMAASTLKMVPF*FRQQRA Trigger: TGCCCGTTGCTGCCTGAATCAGAAGGGCACCATCTT...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAATCCCTGGACATTGGGTaGATATCTCGGGTAGCGCCA | + |
Preference number: 4 (lower is better) Translates to: NFSSSNGGLNLEANPLAKSLDIG*ISRVAP Trigger: TGGCGCTACCCGAGATATGCACCCAATGTCCAGGGA...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCGTGGAGCTCTGCGCTaGTCTTCATGCGCCCTAGCC | + |
Preference number: 4 (lower is better) Translates to: ATTPMGTGICLHQGSAIFRGALR*SSCALA Trigger: GGCTAGGGCGCATGAAGACCAGCGCAGAGCTCCACG...AAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCATTTTCCGTTCCCTTaGTGCTCCGCTGCTCGCGCG | + |
Preference number: 4 (lower is better) Translates to: YLSTPRECNFSSSNGGLNHFPFP*CSAARA Trigger: CGCGCGAGCAGCGGAGCACCAAGGGAACGGAAAATG...GTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAATTTTGCACGCTCCCTaGACATTGGGTGCATATCTC | + |
Preference number: 4 (lower is better) Translates to: SNGGLNLEANPLAKDAFLILHAP*TLGAYL Trigger: GAGATATGCACCCAATGTCCAGGGAGCGTGCAAAAT...TAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAGGAAGCAGAGCTTCCAGAGAACAGTTCTaGAGATCCAGCCCCAAGATG | + |
Preference number: 4 (lower is better) Translates to: LNLEANPLAKDAFLGSRASREQF*RSSPKM Trigger: CATCTTGGGGCTGGATCTCCAGAACTGTTCTCTGGA...AGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTCAGGACACATTTCTaGGTCCCCAGTGTTATTGCA | + |
Preference number: 4 (lower is better) Translates to: SSNGGLNLEANPLAKDAFLRTHF*VPSVIA Trigger: TGCAATAACACTGGGGACCCAGAAATGTGTCCTGAG...AAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATAGACGGATAGAGTGGTaGCTCCCAGAATCCCGAAGA | + |
Preference number: 4 (lower is better) Translates to: FSSSNGGLNLEANPLAKDRRIEW*LPESRR Trigger: TCTTCGGGATTCTGGGAGCCACCACTCTATCCGTCT...ATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCAAGACGGATAGAGTGGTaGCTCCCAGAATCCCGAAGA | + |
Preference number: 4 (lower is better) Translates to: RECNFSSSNGGLNLEANPRRIEW*LPESRR Trigger: TCTTCGGGATTCTGGGAGCCACCACTCTATCCGTCT...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGAAGAACATAAGCAGTaGGAACGAGCCCTGGCGCAT | + |
Preference number: 4 (lower is better) Translates to: NFSSSNGGLNLEANPLAKEEHKQ*ERALAH Trigger: ATGCGCCAGGGCTCGTTCTCACTGCTTATGTTCTTC...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | CAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCTGGCGGCCTCAACCTTaGGGCGAATCCACTGGCGAA | + |
Preference number: 4 (lower is better) Translates to: QQHQWELVFVYTKGVQFFWRPQP*GESTGE Trigger: TTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCA...GAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | GCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCTGCGCTGGTCTTCATaGGCCCTAGCCCTCTTTCGG | + |
Preference number: 4 (lower is better) Translates to: ATTPMGTGICLHQGSAIFLRWSS*ALALFR Trigger: CCGAAAGAGGGCTAGGGCGCATGAAGACCAGCGCAG...AAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | TTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTAGGCAGCAACGGGCATaGAGCATTAGCTCTCGTGTC | + |
Preference number: 4 (lower is better) Translates to: FVYTKGVQFFIFQWRPQPRQQRA*SISSRV Trigger: GACACGAGAGCTAATGCTGCATGCCCGTTGCTGCCT...AGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | ATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCAGGCAGCAACGGGCATaGAGCATTAGCTCTCGTGTC | + |
Preference number: 4 (lower is better) Translates to: ICLHQGSAIFHLPMAASTRQQRA*SISSRV Trigger: GACACGAGAGCTAATGCTGCATGCCCGTTGCTGCCT...GGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | CTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAGGAAGCAGAGCTTTGAGGGGGTTTGCTTaGAGGTCTATGATGACAGTG | + |
Preference number: 4 (lower is better) Translates to: LNLEANPLAKDAFLGSRALRGFA*RSMMTV Trigger: CACTGTCATCATAGACCTGCAAGCAAACCCCCTCAA...AGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | GGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACACCTTTGAGGGGGTTTaGTTGCAGGTCTATGATGAC | + |
Preference number: 4 (lower is better) Translates to: GSAIFHLPMAASTLRRIHTFEGV*LQVYDD Trigger: GTCATCATAGACCTGCAAGCAAACCCCCTCAAAGGT...GTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | TCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTATCAGCACAAACACACTaGAAAAGACCTGGACCATCA | + |
Preference number: 4 (lower is better) Translates to: SNGGLNLEANPLAKDAFLSAQTH*KRPGPS Trigger: TGATGGTCCAGGTCTTTTGCAGTGTGTTTGTGCTGA...TAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCATCCACTGGCGAAAGATaGCTTTCTAGGAAGCAGAGC | + |
Preference number: 4 (lower is better) Translates to: RECNFSSSNGGLNLEANPSTGER*LSRKQS Trigger: GCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGA...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | TTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTGCCCGACCTCAAACTTaGTTCTGTACCTCGGGTAGC | + |
Preference number: 4 (lower is better) Translates to: FVYTKGVQFFIFQWRPQPARPQT*FCTSGS Trigger: GCTACCCGAGGTACAGAAGCAAGTTTGAGGTCGGGC...AGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR CCA 90 bp | GGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTGGCTTTTCCTGCTCGTaGAGCTCTGCGCTGGTCTTC | + |
Preference number: 4 (lower is better) Translates to: GNNTNGNWYLSTPRECNFGFSCS*SSALVF Trigger: GAAGACCAGCGCAGAGCTCCACGAGCAGGAAAAGCC...AAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCCATTTTCCGTTCCCTTaGTGCTCCGCTGCTCGCGCG | + |
Preference number: 4 (lower is better) Translates to: QQHQWELVFVYTKGVQFFHFPFP*CSAARA Trigger: CGCGCGAGCAGCGGAGCACCAAGGGAACGGAAAATG...GAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCACGCTCCCTGGACATTaGGTGCATATCTCGGGTAGC | + |
Preference number: 4 (lower is better) Translates to: WYLSTPRECNFSSSNGGLTLPGH*VHISGS Trigger: GCTACCCGAGATATGCACCCAATGTCCAGGGAGCGT...GAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAGGAAGCAGAGCTCTCAGGACACATTTCTaGGTCCCCAGTGTTATTGCA | + |
Preference number: 4 (lower is better) Translates to: LNLEANPLAKDAFLGSRALRTHF*VPSVIA Trigger: TGCAATAACACTGGGGACCCAGAAATGTGTCCTGAG...AGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTACACTGCAAAAGACCTaGACCATCAGGTACACAAGA | + |
Preference number: 4 (lower is better) Translates to: SSNGGLNLEANPLAKDAFTLQKT*TIRYTR Trigger: TCTTGTGTACCTGATGGTCCAGGTCTTTTGCAGTGT...AAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTTGGCTTTTCGGCGCTaGGTCGCCCAAAGCAGAATG | + |
Preference number: 4 (lower is better) Translates to: FVYTKGVQFFIFQWRPQPLAFRR*VAQSRM Trigger: CATTCTGCTTTGGGCGACCCAGCGCCGAAAAGCCAA...AGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | GAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGTTCCTCCAGGACAGTTaGCATGTTGTGGCAGTATCA | + |
Preference number: 4 (lower is better) Translates to: ECNFSSSNGGLNLEANPLFLQDS*HVVAVS Trigger: TGATACTGCCACAACATGTCAACTGTCCTGGAGGAA...CAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | TCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAACTTTTGACAAATTTTaGACGCTCCCTGGACATTGG | + |
Preference number: 4 (lower is better) Translates to: SNGGLNLEANPLAKDAFLTFDKF*TLPGHW Trigger: CCAATGTCCAGGGAGCGTGCAAAATTTGTCAAAAGT...TAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | GCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCCAGCCCCAAGATGGTaGCCTTCTGATTCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: ATTPMGTGICLHQGSAIFPAPRW*PSDSGS Trigger: GCTGCCTGAATCAGAAGGGCACCATCTTGGGGCTGG...AAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | GAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGTTGAGGGGGTTTGCTTaGAGGTCTATGATGACAGTG | + |
Preference number: 4 (lower is better) Translates to: ECNFSSSNGGLNLEANPLLRGFA*RSMMTV Trigger: CACTGTCATCATAGACCTGCAAGCAAACCCCCTCAA...CAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCATCCCTGGACATTGGGTaGATATCTGGCTGGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: PMGTGICLHQGSAIFHLPSLDIG*ISGWAG Trigger: CCCTGCCCAGCCAGATATGCACCCAATGTCCAGGGA...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR CCA 90 bp | TATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACGATCCAGCCCCAAGATaGTGCCCTTCTGATTCAGGC | + |
Preference number: 4 (lower is better) Translates to: YLSTPRECNFSSSNGGLNDPAPR*CPSDSG Trigger: GCCTGAATCAGAAGGGCACCATCTTGGGGCTGGATC...GTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | ATAGGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATGATCCAGCCCCAAGATaGTGCCCTTCTGATTCAGGC | + |
Preference number: 4 (lower is better) Translates to: IGNNTNGNWYLSTPRECNDPAPR*CPSDSG Trigger: GCCTGAATCAGAAGGGCACCATCTTGGGGCTGGATC...ATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAGACGGATAGAGTGGTaGCTCCCAGAATCCCGAAGA | + |
Preference number: 4 (lower is better) Translates to: WYLSTPRECNFSSSNGGLRRIEW*LPESRR Trigger: TCTTCGGGATTCTGGGAGCCACCACTCTATCCGTCT...GAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTGGAGACGGATAGAGTaGTGGCTCCCAGAATCCCGA | + |
Preference number: 4 (lower is better) Translates to: GNNTNGNWYLSTPRECNFWRRIE*WLPESR Trigger: TCGGGATTCTGGGAGCCACCACTCTATCCGTCTCCA...AAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACTTGGCTTTTCGGCGCTaGGTCGCCCAAAGCAGAATG | + |
Preference number: 4 (lower is better) Translates to: YLSTPRECNFSSSNGGLNLAFRR*VAQSRM Trigger: CATTCTGCTTTGGGCGACCCAGCGCCGAAAAGCCAA...GTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCAGCAGAGCTCCCTGACTaGGCTAAGATAGTTCAGATT | + |
Preference number: 4 (lower is better) Translates to: RECNFSSSNGGLNLEANPAELPD*AKIVQI Trigger: AATCTGAACTATCTTAGCCCAGTCAGGGAGCTCTGC...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTAACACCAATGGGAACTaGTATTTGTCTACACCAAGG | + |
Preference number: 4 (lower is better) Translates to: SSNGGLNLEANPLAKDAFNTNGN*YLSTPR Trigger: CCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTT...AAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTAGGCAACAACACCAATaGGAACTGGTATTTGTCTAC | + |
Preference number: 4 (lower is better) Translates to: SSNGGLNLEANPLAKDAFRQQHQ*ELVFVY Trigger: GTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCT...AAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | GCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTAAGATGGTGCCCTTCTaGTTCAGGCAGCAACGGGCA | + |
Preference number: 4 (lower is better) Translates to: ATTPMGTGICLHQGSAIFKMVPF*FRQQRA Trigger: TGCCCGTTGCTGCCTGAATCAGAAGGGCACCATCTT...AAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAACCTTTGAGGGGGTTTaGTTGCAGGTCTATGATGAC | + |
Preference number: 4 (lower is better) Translates to: NFSSSNGGLNLEANPLAKTFEGV*LQVYDD Trigger: GTCATCATAGACCTGCAAGCAAACCCCCTCAAAGGT...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAACGCTCCCTGGACATTaGGTGCATATCTCGGGTAGC | + |
Preference number: 4 (lower is better) Translates to: PMGTGICLHQGSAIFHLPTLPGH*VHISGS Trigger: GCTACCCGAGATATGCACCCAATGTCCAGGGAGCGT...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGATTTTGCACGCTCCCTaGACATTGGGTGCATATCTC | + |
Preference number: 4 (lower is better) Translates to: CLHQGSAIFHLPMAASTLILHAP*TLGAYL Trigger: GAGATATGCACCCAATGTCCAGGGAGCGTGCAAAAT...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAGATCCAGCCCCAAGATaGTGCCCTTCTGATTCAGGC | + |
Preference number: 4 (lower is better) Translates to: PMGTGICLHQGSAIFHLPDPAPR*CPSDSG Trigger: GCCTGAATCAGAAGGGCACCATCTTGGGGCTGGATC...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | AGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGACAGTTGACATGTTGTaGCAGTATCAGAGTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: SAIFHLPMAASTLRRIHWTVDML*QYQSLE Trigger: CTCCAGACTCTGATACTGCCACAACATGTCAACTGT...CCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCATGGAGACGGATAGAGTaGTGGCTCCCAGAATCCCGA | + |
Preference number: 4 (lower is better) Translates to: PMGTGICLHQGSAIFHLPWRRIE*WLPESR Trigger: TCGGGATTCTGGGAGCCACCACTCTATCCGTCTCCA...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAGGAAGCAGAGCTAGGCAACAACACCAATaGGAACTGGTATTTGTCTAC | + |
Preference number: 4 (lower is better) Translates to: LNLEANPLAKDAFLGSRARQQHQ*ELVFVY Trigger: GTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCT...AGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGATTTTGCACGCTCCCTaGACATTGGGTGCATATCTG | + |
Preference number: 4 (lower is better) Translates to: CLHQGSAIFHLPMAASTLILHAP*TLGAYL Trigger: CAGATATGCACCCAATGTCCAGGGAGCGTGCAAAAT...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR TCA 90 bp | CAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCGAAGAACATAAGCAGTaGGAACGAGCCCTGGCGCAT | + |
Preference number: 4 (lower is better) Translates to: QQHQWELVFVYTKGVQFFEEHKQ*ERALAH Trigger: ATGCGCCAGGGCTCGTTCTCACTGCTTATGTTCTTC...GAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | GGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCTCCACTGGCGAAAGATaGCTTTCTAGGAAGCAGAGC | + |
Preference number: 4 (lower is better) Translates to: GNWYLSTPRECNFSSSNGSTGER*LSRKQS Trigger: GCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGA...GCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | ATAGGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTCCAGAGAACAGTTCTaGAGATCCAGCCCCAAGATG | + |
Preference number: 4 (lower is better) Translates to: IGNNTNGNWYLSTPRECNSREQF*RSSPKM Trigger: CATCTTGGGGCTGGATCTCCAGAACTGTTCTCTGGA...ATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACTGCCTGATGAAAGTTTaGACCAGGGTCCTCCAGAGA | + |
Preference number: 4 (lower is better) Translates to: YLSTPRECNFSSSNGGLNCLMKV*TRVLQR Trigger: TCTCTGGAGGACCCTGGTCCAAACTTTCATCAGGCA...GTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGACAGTTGACATGTTGTaGCAGTATCAGAGTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: CLHQGSAIFHLPMAASTLTVDML*QYQSLE Trigger: CTCCAGACTCTGATACTGCCACAACATGTCAACTGT...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCCTCAGGACACATTTCTaGGTCCCCAGTGTTATTGCA | + |
Preference number: 4 (lower is better) Translates to: WYLSTPRECNFSSSNGGLLRTHF*VPSVIA Trigger: TGCAATAACACTGGGGACCCAGAAATGTGTCCTGAG...GAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACAGTGAGAACGAGCCCTaGCGCATACACTTGTATCCA | + |
Preference number: 4 (lower is better) Translates to: YLSTPRECNFSSSNGGLNSENEP*RIHLYP Trigger: TGGATACAAGTGTATGCGCCAGGGCTCGTTCTCACT...GTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | AGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGAGGCAACAACACCAATaGGAACTGGTATTTGTCTAC | + |
Preference number: 4 (lower is better) Translates to: SAIFHLPMAASTLRRIHWRQQHQ*ELVFVY Trigger: GTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCT...CCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | GGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCACCTTTGAGGGGGTTTaGTTGCAGGTCTATGATGAC | + |
Preference number: 4 (lower is better) Translates to: GNWYLSTPRECNFSSSNGTFEGV*LQVYDD Trigger: GTCATCATAGACCTGCAAGCAAACCCCCTCAAAGGT...GCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCTCCAGAGAACAGTTCTaGAGATCCAGCCCCAAGATG | + |
Preference number: 4 (lower is better) Translates to: QQHQWELVFVYTKGVQFFSREQF*RSSPKM Trigger: CATCTTGGGGCTGGATCTCCAGAACTGTTCTCTGGA...GAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCACACTGCAAAAGACCTaGACCATCAGGTACACAAGA | + |
Preference number: 4 (lower is better) Translates to: WYLSTPRECNFSSSNGGLTLQKT*TIRYTR Trigger: TCTTGTGTACCTGATGGTCCAGGTCTTTTGCAGTGT...GAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAGGAAGCAGAGCTATACACTTGTATCCATaGAAACCATCAGCACAAACA | + |
Preference number: 4 (lower is better) Translates to: LNLEANPLAKDAFLGSRAIHLYP*KPSAQT Trigger: TGTTTGTGCTGATGGTTTCCATGGATACAAGTGTAT...AGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTAGTGAGAACGAGCCCTaGCGCATACACTTGTATCCA | + |
Preference number: 4 (lower is better) Translates to: ATTPMGTGICLHQGSAIFSENEP*RIHLYP Trigger: TGGATACAAGTGTATGCGCCAGGGCTCGTTCTCACT...AAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | TTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTACTTTTGACAAATTTTaGACGCTCCCTGGACATTGG | + |
Preference number: 4 (lower is better) Translates to: FVYTKGVQFFIFQWRPQPTFDKF*TLPGHW Trigger: CCAATGTCCAGGGAGCGTGCAAAATTTGTCAAAAGT...AGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCATTGAGGGGGTTTGCTTaGAGGTCTATGATGACAGTG | + |
Preference number: 4 (lower is better) Translates to: PMGTGICLHQGSAIFHLPLRGFA*RSMMTV Trigger: CACTGTCATCATAGACCTGCAAGCAAACCCCCTCAA...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | GGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCTCAGCACAAACACACTaGAAAAGACCTGGACCATCA | + |
Preference number: 4 (lower is better) Translates to: GNWYLSTPRECNFSSSNGSAQTH*KRPGPS Trigger: TGATGGTCCAGGTCTTTTGCAGTGTGTTTGTGCTGA...GCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | AGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGTCTACACCAAGGGAGTaGAATTTTTCATCTTCCAAT | + |
Preference number: 4 (lower is better) Translates to: SAIFHLPMAASTLRRIHWSTPRE*NFSSSN Trigger: ATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGA...CCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTACAGTTGACATGTTGTaGCAGTATCAGAGTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: GNNTNGNWYLSTPRECNFTVDML*QYQSLE Trigger: CTCCAGACTCTGATACTGCCACAACATGTCAACTGT...AAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGATACACTTGTATCCATaGAAACCATCAGCACAAACA | + |
Preference number: 4 (lower is better) Translates to: ECNFSSSNGGLNLEANPLIHLYP*KPSAQT Trigger: TGTTTGTGCTGATGGTTTCCATGGATACAAGTGTAT...CAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAGCAGAGCTCCCTGACTaGGCTAAGATAGTTCAGATT | + |
Preference number: 4 (lower is better) Translates to: PMGTGICLHQGSAIFHLPAELPD*AKIVQI Trigger: AATCTGAACTATCTTAGCCCAGTCAGGGAGCTCTGC...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | ATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCAACACCAATGGGAACTaGTATTTGTCTACACCAAGG | + |
Preference number: 4 (lower is better) Translates to: ICLHQGSAIFHLPMAASTNTNGN*YLSTPR Trigger: CCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTT...GGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACACCAATGGGAACTaGTATTTGTCTACACCAAGG | + |
Preference number: 4 (lower is better) Translates to: WYLSTPRECNFSSSNGGLNTNGN*YLSTPR Trigger: CCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTT...GAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | TGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAGGTTCTTTTGCCCTTaGCAGATTTGGTTGTCTATA | + |
Preference number: 4 (lower is better) Translates to: WYLSTPRECNFSSSNGGLRFFCP*QIWLSI Trigger: TATAGACAACCAAATCTGTCAAGGGCAAAAGAACCT...GAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | ATAGGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATACTTTTGACAAATTTTaGACGCTCCCTGGACATTGG | + |
Preference number: 4 (lower is better) Translates to: IGNNTNGNWYLSTPRECNTFDKF*TLPGHW Trigger: CCAATGTCCAGGGAGCGTGCAAAATTTGTCAAAAGT...ATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | CAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCTCAGCACAAACACACTaGAAAAGACCTGGACCATCA | + |
Preference number: 4 (lower is better) Translates to: QQHQWELVFVYTKGVQFFSAQTH*KRPGPS Trigger: TGATGGTCCAGGTCTTTTGCAGTGTGTTTGTGCTGA...GAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAATCTACACCAAGGGAGTaGAATTTTTCATCTTCCAAT | + |
Preference number: 4 (lower is better) Translates to: NFSSSNGGLNLEANPLAKSTPRE*NFSSSN Trigger: ATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGA...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | GCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTACACTGCAAAAGACCTaGACCATCAGGTACACAAGA | + |
Preference number: 4 (lower is better) Translates to: ATTPMGTGICLHQGSAIFTLQKT*TIRYTR Trigger: TCTTGTGTACCTGATGGTCCAGGTCTTTTGCAGTGT...AAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CCA 90 bp | TGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCATACACTTGTATCCATaGAAACCATCAGCACAAACA | + |
Preference number: 4 (lower is better) Translates to: WYLSTPRECNFSSSNGGLIHLYP*KPSAQT Trigger: TGTTTGTGCTGATGGTTTCCATGGATACAAGTGTAT...GAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAAGGTTCTTTTGCCCTTaGCAGATTTGGTTGTCTATA | + |
Preference number: 4 (lower is better) Translates to: PMGTGICLHQGSAIFHLPRFFCP*QIWLSI Trigger: TATAGACAACCAAATCTGTCAAGGGCAAAAGAACCT...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR TCA 90 bp | CAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCAGGTTCTTTTGCCCTTaGCAGATTTGGTTGTCTATA | + |
Preference number: 4 (lower is better) Translates to: QQHQWELVFVYTKGVQFFRFFCP*QIWLSI Trigger: TATAGACAACCAAATCTGTCAAGGGCAAAAGAACCT...GAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR GCA 90 bp | TATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACTCTACACCAAGGGAGTaGAATTTTTCATCTTCCAAT | + |
Preference number: 4 (lower is better) Translates to: YLSTPRECNFSSSNGGLNSTPRE*NFSSSN Trigger: ATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGA...GTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS GCA 90 bp | TTAGTGAAGGCCTCCCCCGTCGCCGCGCGGCTTCCCGGAGCCGACTaGAGACTCCCTCAGCCCGGTGTTCCCCGCGTCCGGACGCCGAGG | + |
Preference number: 5 (lower is better) Translates to: LVKASPVAARLPGAD*RLPQPGVPRVRTPR Trigger: CCTCGGCGTCCGGACGCGGGGAACACCGGGCTGAGGGAGTCTGCAGTCGGCTCCGGGAAGCCGCGCGGCGACGGGGGAGGCCTTCACTAA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS CCA 90 bp | GACGAAATCAGAACCGCAGGCCCGCCGAGGAGAAGGGGGAGCCGCTaGCGAGCGCGACGCACGGCTGGCCAGCGACCCTGCTTCAGCCCG | + |
Preference number: 5 (lower is better) Translates to: DEIRTAGPPRRRGSR*RARRTAGQRPCFSP Trigger: CGGGCTGAAGCAGGGTCGCTGGCCAGCCGTGCGTCGCGCTCGCCAGCGGCTCCCCCTTCTCCTCGGCGGGCCTGCGGTTCTGATTTCGTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS CCA 90 bp | CCCGCCGAGGAGAAGGGGGAGCCGCTGGCGAGCGCGACGCACGGCTaGCCAGCGACCCTGCTTCAGCCCGACCTCAAACTTGCTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: PAEEKGEPLASATHG*PATLLQPDLKLASV Trigger: TACAGAAGCAAGTTTGAGGTCGGGCTGAAGCAGGGTCGCTGGCCAGCCGTGCGTCGCGCTCGCCAGCGGCTCCCCCTTCTCCTCGGCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS TCA 90 bp | AGGGCGGCAGCCCAGGGCACCAGGGTCGTAAGACTACCCGGGTCGTaGGGCGCCATTTTCCGTTCCCTTGGTGCTCCGCTGCTCGCGCGA | + |
Preference number: 5 (lower is better) Translates to: RAAAQGTRVVRLPGS*GAIFRSLGAPLLAR Trigger: TCGCGCGAGCAGCGGAGCACCAAGGGAACGGAAAATGGCGCCTCACGACCCGGGTAGTCTTACGACCCTGGTGCCCTGGGCTGCCGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000484646.1 ENST00000611786.4 |
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CDS GCA 90 bp | GACGCACGGCTGGCCAGCGACCCTGCTTCAGCCCGACCTCAAACTTaGTTCTGTACCTCGGGTAGCGCCAGAGCCCTTTCCACGCCCAGA | + |
Preference number: 5 (lower is better) Translates to: DARLASDPASARPQT*FCTSGSARALSTPR Trigger: TCTGGGCGTGGAAAGGGCTCTGGCGCTACCCGAGGTACAGAAGCAAGTTTGAGGTCGGGCTGAAGCAGGGTCGCTGGCCAGCCGTGCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR CAA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACCATTTTCCGTTCCCTaGGTGCTCCGCTGCTCGCGC | + |
Preference number: 5 (lower is better) Translates to: RECNFSSSNGGLNLEANPPFSVP*VLRCSR Trigger: GCGCGAGCAGCGGAGCACCAAGGGAACGGAAAATGG...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGCCATTTTCCGTTCCCTaGGTGCTCCGCTGCTCGCGC | + |
Preference number: 5 (lower is better) Translates to: CLHQGSAIFHLPMAASTLPFSVP*VLRCSR Trigger: GCGCGAGCAGCGGAGCACCAAGGGAACGGAAAATGG...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATATGGCGGCCTCAACCTaGAGGCGAATCCACTGGCGA | + |
Preference number: 5 (lower is better) Translates to: FSSSNGGLNLEANPLAKDMAAST*RRIHWR Trigger: TCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCAT...ATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAACACGCTCCCTGGACATaGGGTGCATATCTGGCTGGG | + |
Preference number: 5 (lower is better) Translates to: NFSSSNGGLNLEANPLAKHAPWT*GAYLAG Trigger: CCCAGCCAGATATGCACCCAATGTCCAGGGAGCGTG...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS-3UTR CAA 90 bp | TTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGTGCCTGATGAAAGTTaGGACCAGGGTCCTCCAGAG | + |
Preference number: 5 (lower is better) Translates to: FSSSNGGLNLEANPLAKDVPDES*DQGPPE Trigger: CTCTGGAGGACCCTGGTCCAAACTTTCATCAGGCAC...ATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCAAAGCCACGGAAGGTGTaGGCCAAGTCACCTTTGAGG | + |
Preference number: 5 (lower is better) Translates to: RECNFSSSNGGLNLEANPKPRKV*AKSPLR Trigger: CCTCAAAGGTGACTTGGCCAACACCTTCCGTGGCTT...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | CTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAGGAAGCAGAGCTGTAGTTCATGAAGTCTaGGCTTTTCGGCGCTGGGTC | + |
Preference number: 5 (lower is better) Translates to: LNLEANPLAKDAFLGSRAVVHEV*AFRRWV Trigger: GACCCAGCGCCGAAAAGCCAAGACTTCATGAACTAC...AGCTCTGCTTCCTAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGGTGCCTGATGAAAGTTaGGACCAGGGTCCTCCAGAG | + |
Preference number: 5 (lower is better) Translates to: CLHQGSAIFHLPMAASTLVPDES*DQGPPE Trigger: CTCTGGAGGACCCTGGTCCAAACTTTCATCAGGCAC...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAATTGGCCAAGTCACCTTaGAGGGGGTTTGCTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: NFSSSNGGLNLEANPLAKLAKSP*RGFACR Trigger: CCTGCAAGCAAACCCCCTCAAAGGTGACTTGGCCAA...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTTGGCCAAGTCACCTTaGAGGGGGTTTGCTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: FVYTKGVQFFIFQWRPQPLAKSP*RGFACR Trigger: CCTGCAAGCAAACCCCCTCAAAGGTGACTTGGCCAA...AGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAAGCCACGGAAGGTGTaGGCCAAGTCACCTTTGAGG | + |
Preference number: 5 (lower is better) Translates to: WYLSTPRECNFSSSNGGLKPRKV*AKSPLR Trigger: CCTCAAAGGTGACTTGGCCAACACCTTCCGTGGCTT...GAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCAGGGTCCCCAGTGTTATaGCAAAGGTTCTTTTGCCCT | + |
Preference number: 5 (lower is better) Translates to: RECNFSSSNGGLNLEANPGSPVL*QRFFCP Trigger: AGGGCAAAAGAACCTTTGCAATAACACTGGGGACCC...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGGTAGTTCATGAAGTCTaGGCTTTTCGGCGCTGGGTC | + |
Preference number: 5 (lower is better) Translates to: CLHQGSAIFHLPMAASTLVVHEV*AFRRWV Trigger: GACCCAGCGCCGAAAAGCCAAGACTTCATGAACTAC...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTaGAGGCGAATCCACTGGCGA | + |
Preference number: 5 (lower is better) Translates to: PMGTGICLHQGSAIFHLPMAAST*RRIHWR Trigger: TCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCAT...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATTTTGAGGGGGTTTGCTaGCAGGTCTATGATGACAGT | + |
Preference number: 5 (lower is better) Translates to: FSSSNGGLNLEANPLAKDFEGVC*QVYDDS Trigger: ACTGTCATCATAGACCTGCAAGCAAACCCCCTCAAA...ATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | ATAGGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATAAGCCACGGAAGGTGTaGGCCAAGTCACCTTTGAGG | + |
Preference number: 5 (lower is better) Translates to: IGNNTNGNWYLSTPRECNKPRKV*AKSPLR Trigger: CCTCAAAGGTGACTTGGCCAACACCTTCCGTGGCTT...ATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | GAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGAGGACAGTTGACATGTaGTGGCAGTATCAGAGTCTG | + |
Preference number: 5 (lower is better) Translates to: ECNFSSSNGGLNLEANPLRTVDM*WQYQSL Trigger: CAGACTCTGATACTGCCACAACATGTCAACTGTCCT...CAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATAGGACAGTTGACATGTaGTGGCAGTATCAGAGTCTG | + |
Preference number: 5 (lower is better) Translates to: FSSSNGGLNLEANPLAKDRTVDM*WQYQSL Trigger: CAGACTCTGATACTGCCACAACATGTCAACTGTCCT...ATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCAAGGACAGTTGACATGTaGTGGCAGTATCAGAGTCTG | + |
Preference number: 5 (lower is better) Translates to: RECNFSSSNGGLNLEANPRTVDM*WQYQSL Trigger: CAGACTCTGATACTGCCACAACATGTCAACTGTCCT...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | AATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAACCCTGGCGCATACACTaGTATCCATGGAAACCATCA | + |
Preference number: 5 (lower is better) Translates to: NFSSSNGGLNLEANPLAKPWRIH*YPWKPS Trigger: TGATGGTTTCCATGGATACAAGTGTATGCGCCAGGG...TTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGCCCTGGCGCATACACTaGTATCCATGGAAACCATCA | + |
Preference number: 5 (lower is better) Translates to: CLHQGSAIFHLPMAASTLPWRIH*YPWKPS Trigger: TGATGGTTTCCATGGATACAAGTGTATGCGCCAGGG...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TCCAATGGCGGCCTCAACCTTGAGGCGAATCCACTGGCGAAAGATGCCTTTCTAAATAAAAGGCCACTTTaGACAAATTTTGCACGCTCC | + |
Preference number: 5 (lower is better) Translates to: SNGGLNLEANPLAKDAFLNKRPL*TNFARS Trigger: GGAGCGTGCAAAATTTGTCAAAAGTGGCCTTTTATT...TAGAAAGGCATCTTTCGCCAGTGGATTCGCCTCAAGGTTGAGGCCGCCATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAGTGCCTGATGAAAGTTaGGACCAGGGTCCTCCAGAG | + |
Preference number: 5 (lower is better) Translates to: PMGTGICLHQGSAIFHLPVPDES*DQGPPE Trigger: CTCTGGAGGACCCTGGTCCAAACTTTCATCAGGCAC...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | CAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCTTGGCCAAGTCACCTTaGAGGGGGTTTGCTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: QQHQWELVFVYTKGVQFFLAKSP*RGFACR Trigger: CCTGCAAGCAAACCCCCTCAAAGGTGACTTGGCCAA...GAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | ATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCGGGTCCCCAGTGTTATaGCAAAGGTTCTTTTGCCCT | + |
Preference number: 5 (lower is better) Translates to: ICLHQGSAIFHLPMAASTGSPVL*QRFFCP Trigger: AGGGCAAAAGAACCTTTGCAATAACACTGGGGACCC...GGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | ATAGGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATGTAGTTCATGAAGTCTaGGCTTTTCGGCGCTGGGTC | + |
Preference number: 5 (lower is better) Translates to: IGNNTNGNWYLSTPRECNVVHEV*AFRRWV Trigger: GACCCAGCGCCGAAAAGCCAAGACTTCATGAACTAC...ATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS GCA 90 bp | TGGCGCATACACTTGTATCCATGGAAACCATCAGCACAAACACACTaGAAAAGACCTGGACCATCAGGTACACAAGATCCATTCTCAGGA | + |
Preference number: 5 (lower is better) Translates to: WRIHLYPWKPSAQTH*KRPGPSGTQDPFSG Trigger: TCCTGAGAATGGATCTTGTGTACCTGATGGTCCAGGTCTTTTGCAGTGTGTTTGTGCTGATGGTTTCCATGGATACAAGTGTATGCGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000472515.1 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTTTGAGGGGGTTTGCTaGCAGGTCTATGATGACAGT | + |
Preference number: 5 (lower is better) Translates to: FVYTKGVQFFIFQWRPQPFEGVC*QVYDDS Trigger: ACTGTCATCATAGACCTGCAAGCAAACCCCCTCAAA...AGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | ATAGGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATGGGTCCCCAGTGTTATaGCAAAGGTTCTTTTGCCCT | + |
Preference number: 5 (lower is better) Translates to: IGNNTNGNWYLSTPRECNGSPVL*QRFFCP Trigger: AGGGCAAAAGAACCTTTGCAATAACACTGGGGACCC...ATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | AGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCCAAATAAAAGGCCACTTTaGACAAATTTTGCACGCTCC | + |
Preference number: 5 (lower is better) Translates to: RECNFSSSNGGLNLEANPNKRPL*TNFARS Trigger: GGAGCGTGCAAAATTTGTCAAAAGTGGCCTTTTATT...TGGATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | GGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCTTTGAGGGGGTTTGCTaGCAGGTCTATGATGACAGT | + |
Preference number: 5 (lower is better) Translates to: GNWYLSTPRECNFSSSNGFEGVC*QVYDDS Trigger: ACTGTCATCATAGACCTGCAAGCAAACCCCCTCAAA...GCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | CAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAGGCGAATCATTGCAAAGGTTCTTTaGCCCTTGACAGATTTGGTT | + |
Preference number: 5 (lower is better) Translates to: QGSAIFHLPMAASTLRRIIAKVL*PLTDLV Trigger: AACCAAATCTGTCAAGGGCAAAAGAACCTTTGCAAT...GATTCGCCTCAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGAATAAAAGGCCACTTTaGACAAATTTTGCACGCTCC | + |
Preference number: 5 (lower is better) Translates to: CLHQGSAIFHLPMAASTLNKRPL*TNFARS Trigger: GGAGCGTGCAAAATTTGTCAAAAGTGGCCTTTTATT...CAAGGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | ATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACCTTGCCCTTGACAGATTaGGTTGTCTATATAAGAGGT | + |
Preference number: 5 (lower is better) Translates to: ICLHQGSAIFHLPMAASTLPLTD*VVYIRG Trigger: ACCTCTTATATAGACAACCAAATCTGTCAAGGGCAA...GGTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAAGGTTCTTTTGCCCTaGACAGATTTGGTTGTCTAT | + |
Preference number: 5 (lower is better) Translates to: WYLSTPRECNFSSSNGGLKVLLP*TDLVVY Trigger: ATAGACAACCAAATCTGTCAAGGGCAAAAGAACCTT...GAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS CCA 90 bp | ACCTGGACCATCAGGTACACAAGATCCATTCTCAGGACACATTTCTaGAGGCCAGAGAGAAATAGAGAACATCACTTTATCCATTTCATT | + |
Preference number: 5 (lower is better) Translates to: TWTIRYTRSILRTHF*RPERNREHHFIHFI Trigger: AATGAAATGGATAAAGTGATGTTCTCTATTTCTCTCTGGCCTCCAGAAATGTGTCCTGAGAATGGATCTTGTGTACCTGATGGTCCAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472515.1 |
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CDS-3UTR CAA 90 bp | GGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTTGCCCTTGACAGATTaGGTTGTCTATATAAGAGGT | + |
Preference number: 5 (lower is better) Translates to: GNNTNGNWYLSTPRECNFLPLTD*VVYIRG Trigger: ACCTCTTATATAGACAACCAAATCTGTCAAGGGCAA...AAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | TATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAATGGCGGCCTCAACAAGGTTCTTTTGCCCTaGACAGATTTGGTTGTCTAT | + |
Preference number: 5 (lower is better) Translates to: YLSTPRECNFSSSNGGLNKVLLP*TDLVVY Trigger: ATAGACAACCAAATCTGTCAAGGGCAAAAGAACCTT...GTTGAGGCCGCCATTGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | GGCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTATTGCAAAGGTTCTTTaGCCCTTGACAGATTTGGTT | + |
Preference number: 5 (lower is better) Translates to: GNNTNGNWYLSTPRECNFIAKVL*PLTDLV Trigger: AACCAAATCTGTCAAGGGCAAAAGAACCTTTGCAAT...AAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCATTGCCCTTGACAGATTaGGTTGTCTATATAAGAGGT | + |
Preference number: 5 (lower is better) Translates to: PMGTGICLHQGSAIFHLPLPLTD*VVYIRG Trigger: ACCTCTTATATAGACAACCAAATCTGTCAAGGGCAA...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | CCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTCATCTTCCAAAGGTTCTTTTGCCCTaGACAGATTTGGTTGTCTAT | + |
Preference number: 5 (lower is better) Translates to: PMGTGICLHQGSAIFHLPKVLLP*TDLVVY Trigger: ATAGACAACCAAATCTGTCAAGGGCAAAAGAACCTT...TGGAAGATGAAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS-3UTR CAA 90 bp | GCAACAACACCAATGGGAACTGGTATTTGTCTACACCAAGGGAGTGCAATTTTTATTGCAAAGGTTCTTTaGCCCTTGACAGATTTGGTT | + |
Preference number: 5 (lower is better) Translates to: ATTPMGTGICLHQGSAIFIAKVL*PLTDLV Trigger: AACCAAATCTGTCAAGGGCAAAAGAACCTTTGCAAT...AAAAATTGCACTCCCTTGGTGTAGACAAATACCAGTTCCCATTGGTGTTGTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS GCA 72 bp | GCCTCCCCCGTCGCCGCGCGGCTTCCCGGAGCCGACTaGAGACTCCCTCAGCCCGGTGTTCCCCGCGTCCGG | + |
Preference number: 6 (lower is better) Translates to: ASPVAARLPGAD*RLPQPGVPRVR Trigger: CCGGACGCGGGGAACACCGGGCTGAGGGAGTCTGCAGTCGGCTCCGGGAAGCCGCGCGGCGACGGGGGAGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS CCA 72 bp | AGAACCGCAGGCCCGCCGAGGAGAAGGGGGAGCCGCTaGCGAGCGCGACGCACGGCTGGCCAGCGACCCTGC | + |
Preference number: 6 (lower is better) Translates to: RTAGPPRRRGSR*RARRTAGQRPC Trigger: GCAGGGTCGCTGGCCAGCCGTGCGTCGCGCTCGCCAGCGGCTCCCCCTTCTCCTCGGCGGGCCTGCGGTTCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS CCA 72 bp | GAGAAGGGGGAGCCGCTGGCGAGCGCGACGCACGGCTaGCCAGCGACCCTGCTTCAGCCCGACCTCAAACTT | + |
Preference number: 6 (lower is better) Translates to: EKGEPLASATHG*PATLLQPDLKL Trigger: AAGTTTGAGGTCGGGCTGAAGCAGGGTCGCTGGCCAGCCGTGCGTCGCGCTCGCCAGCGGCTCCCCCTTCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS GCA 72 bp | CGCTGGCGAGCGCGACGCACGGCTGGCCAGCGACCCTaGTTCAGCCCGACCTCAAACTTGCTTCTGTACCTC | + |
Preference number: 6 (lower is better) Translates to: RWRARRTAGQRP*FSPTSNLLLYL Trigger: GAGGTACAGAAGCAAGTTTGAGGTCGGGCTGAAGCAGGGTCGCTGGCCAGCCGTGCGTCGCGCTCGCCAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS TCA 72 bp | GCCCAGGGCACCAGGGTCGTAAGACTACCCGGGTCGTaGGGCGCCATTTTCCGTTCCCTTGGTGCTCCGCTG | + |
Preference number: 6 (lower is better) Translates to: AQGTRVVRLPGS*GAIFRSLGAPL Trigger: CAGCGGAGCACCAAGGGAACGGAAAATGGCGCCTCACGACCCGGGTAGTCTTACGACCCTGGTGCCCTGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000484646.1 ENST00000611786.4 |
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CDS GCA 72 bp | GCTTTTCCTGCTCGTGGAGCTCTGCGCTGGTCTTCATaGGCCCTAGCCCTCTTTCGGGGATACTGGCCGACC | + |
Preference number: 6 (lower is better) Translates to: AFPARGALRWSS*ALALFRGYWPT Trigger: GGTCGGCCAGTATCCCCGAAAGAGGGCTAGGGCGCATGAAGACCAGCGCAGAGCTCCACGAGCAGGAAAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380171.8 ENST00000611786.4 |
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CDS GCA 72 bp | CTGGCCAGCGACCCTGCTTCAGCCCGACCTCAAACTTaGTTCTGTACCTCGGGTAGCGCCAGAGCCCTTTCC | + |
Preference number: 6 (lower is better) Translates to: LASDPASARPQT*FCTSGSARALS Trigger: GGAAAGGGCTCTGGCGCTACCCGAGGTACAGAAGCAAGTTTGAGGTCGGGCTGAAGCAGGGTCGCTGGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405489.7 |
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CDS CCA 72 bp | TCTTGGCTTTTCGGCGCTGGGTCGCCCAAAGCAGAATaGAGACGGATAGAGTGGTGGCTCCCAGAATCCCGA | + |
Preference number: 6 (lower is better) Translates to: SWLFGAGSPKAE*RRIEWWLPESR Trigger: TCGGGATTCTGGGAGCCACCACTCTATCCGTCTCCATTCTGCTTTGGGCGACCCAGCGCCGAAAAGCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000472515.1 ENST00000611786.4 |
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CDS TCA 72 bp | CAGTTCTGGAGATCCAGCCCCAAGATGGTGCCCTTCTaGTTCAGGCAGCAACGGGCATGCAGCATTAGCTCT | + |
Preference number: 6 (lower is better) Translates to: QFWRSSPKMVPF*FRQQRACSISS Trigger: AGAGCTAATGCTGCATGCCCGTTGCTGCCTGAATCAGAAGGGCACCATCTTGGGGCTGGATCTCCAGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000419744.1 ENST00000491220.1 ENST00000611786.4 |
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CDS GCA 72 bp | ACGGAAGGTGTTGGCCAAGTCACCTTTGAGGGGGTTTaGTTGCAGGTCTATGATGACAGTGGTATGTGCCTG | + |
Preference number: 6 (lower is better) Translates to: TEGVGQVTFEGV*LQVYDDSGMCL Trigger: CAGGCACATACCACTGTCATCATAGACCTGCAAGCAAACCCCCTCAAAGGTGACTTGGCCAACACCTTCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000419744.1 ENST00000611786.4 |
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CDS GCA 72 bp | GGGGTTTGCTTGCAGGTCTATGATGACAGTGGTATGTaGCTGATGAAAGTTTGGACCAGGGTCCTCCAGAGA | + |
Preference number: 6 (lower is better) Translates to: GVCLQVYDDSGM*LMKVWTRVLQR Trigger: TCTCTGGAGGACCCTGGTCCAAACTTTCATCAGGCACATACCACTGTCATCATAGACCTGCAAGCAAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000419744.1 ENST00000611786.4 |
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CDS CCA 72 bp | ACCTATGTAGTTCATGAAGTCTTGGCTTTTCGGCGCTaGGTCGCCCAAAGCAGAATGGAGACGGATAGAGTG | + |
Preference number: 6 (lower is better) Translates to: TYVVHEVLAFRR*VAQSRMETDRV Trigger: CACTCTATCCGTCTCCATTCTGCTTTGGGCGACCCAGCGCCGAAAAGCCAAGACTTCATGAACTACATAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000472515.1 ENST00000611786.4 |
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CDS GCA 72 bp | GAGGTACCTAACTACTTACATGATGACAGTGGTATGTaGCTGATGAAAGTTTGGACCAGGGTCCTCCAGAGA | + |
Preference number: 6 (lower is better) Translates to: EVPNYLHDDSGM*LMKVWTRVLQR Trigger: TCTCTGGAGGACCCTGGTCCAAACTTTCATCAGGCACATACCACTGTCATCATGTAAGTAGTTAGGTACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491220.1 |
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CDS CAA 72 bp | ATTCCAGGCATTAATTCCTCCAGGACAGTTGACATGTaGTGGCAGTATCAGAGTCTGGAGCTGAGTAAAGCC | + |
Preference number: 6 (lower is better) Translates to: IPGINSSRTVDM*WQYQSLELSKA Trigger: GGCTTTACTCAGCTCCAGACTCTGATACTGCCACAACATGTCAACTGTCCTGGAGGAATTAATGCCTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS CCA 72 bp | GCCACTTTTGACAAATTTTGCACGCTCCCTGGACATTaGGTGCATATCTGCAGAAGAGAAAGAAACATTAGA | + |
Preference number: 6 (lower is better) Translates to: ATFDKFCTLPGH*VHICRRERNIR Trigger: TCTAATGTTTCTTTCTCTTCTGCAGATATGCACCCAATGTCCAGGGAGCGTGCAAAATTTGTCAAAAGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419744.1 |
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CDS CAA 90 bp | ACACATTTCTGGGTCCCCAGTGTTATTGCAAAGGTTCTTTTGCCCTaGACAGATTTGGTTGTCTATATAAGAGGTGATAGTATTCCAGGC | + |
Preference number: 6 (lower is better) Translates to: THFWVPSVIAKVLLP*TDLVVYIRGDSIPG Trigger: GCCTGGAATACTATCACCTCTTATATAGACAACCAAATCTGTCAAGGGCAAAAGAACCTTTGCAATAACACTGGGGACCCAGAAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS CAA 90 bp | CTCAGGACACATTTCTGGGTCCCCAGTGTTATTGCAAAGGTTCTTTaGCCCTTGACAGATTTGGTTGTCTATATAAGAGGTGATAGTATT | + |
Preference number: 6 (lower is better) Translates to: LRTHFWVPSVIAKVL*PLTDLVVYIRGDSI Trigger: AATACTATCACCTCTTATATAGACAACCAAATCTGTCAAGGGCAAAAGAACCTTTGCAATAACACTGGGGACCCAGAAATGTGTCCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380171.8 ENST00000405489.7 ENST00000611786.4 |
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CDS TCA 72 bp | CAGTACCAGATATCGCACAGGGAAGGTCCTCATCTCTaGAGATCACTATTCGAACTTATTTATTATGCTTTC | + |
Preference number: 6 (lower is better) Translates to: QYQISHREGPHL*RSLFELIYYAF Trigger: GAAAGCATAATAAATAAGTTCGAATAGTGATCTTCAGAGATGAGGACCTTCCCTGTGCGATATCTGGTACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419744.1 |