RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATPAF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000171953

Ensembl transcript IDs: ENST00000444058.1, ENST00000462733.5, ENST00000465337.2, ENST00000467560.5, ENST00000469327.5, ENST00000474627.8, ENST00000488753.1, ENST00000496852.5, ENST00000497871.1, ENST00000577586.5, ENST00000581698.1, ENST00000584205.5, ENST00000585101.5

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATGAACCAGCCGTGCAACTCGATGGAGCCGAGGGTGATGGACGATaGCATGCTCAAGCTGGCCGTCGGGGACCAGGGCCCCCAGGAGGA +
Preference number: 1 (lower is better)
Translates to: DEPAVQLDGAEGDGR*HAQAGRRGPGPPGG
Trigger: TCCTCCTGGGGGCCCTGGTCCCCGACGGCCAGCTTGAGCATGTCATCGTCCATCACCCTCGGCTCCATCGAGTTGCACGGCTGGTTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR GCA 90 bp AATCCTCCCTGGTACTCCTCCTCCAGGCGTGACAGCAGCACGGCCTaGTCCACTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACC +
Preference number: 1 (lower is better)
Translates to: NPPWYSSSRRDSSTA*STVRRRSIRPKVST
Trigger: GGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGGGAGGATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR GCA 90 bp AAGGTTCAGGGGTGGTGGCCAGGGTGGGCCCTCCCTGGCTTTCTCTaGTCCATCTTCAAGCCCCAGGATTCCATGCAAAGTCCACGGTCG +
Preference number: 1 (lower is better)
Translates to: KVQGWWPGWALPGFL*SIFKPQDSMQSPRS
Trigger: CGACCGTGGACTTTGCATGGAATCCTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGGGAGGGCCCACCCTGGCCACCACCCCTGAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR CCA 90 bp GTCCCTGCAGCTGGACTTTCGGAGTATGTATCCAAGGTTCAGGGGTaGTGGCCAGGGTGGGCCCTCCCTGGCTTTCTCTGCTCCATCTTC +
Preference number: 1 (lower is better)
Translates to: VPAAGLSEYVSKVQG*WPGWALPGFLCSIF
Trigger: GAAGATGGAGCAGAGAAAGCCAGGGAGGGCCCACCCTGGCCACCACCCCTGAACCTTGGATACATACTCCGAAAGTCCAGCTGCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR CCA 90 bp CGTAAGTATACAAACCCCGAGATGCAGCAGACCCAGGGCTGGGCGTaGGGCATTCCTCAGAGTGCCAGTGGCCACAAGACACTACAGGGG +
Preference number: 1 (lower is better)
Translates to: RKYTNPEMQQTQGWA*GIPQSASGHKTLQG
Trigger: CCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGGAATGCCCCACGCCCAGCCCTGGGTCTGCTGCATCTCGGGGTTTGTATACTTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR CCA 90 bp GGACTTTCGGAGTATGTATCCAAGGTTCAGGGGTGGTGGCCAGGGTaGGCCCTCCCTGGCTTTCTCTGCTCCATCTTCAAGCCCCAGGAT +
Preference number: 1 (lower is better)
Translates to: GLSEYVSKVQGWWPG*ALPGFLCSIFKPQD
Trigger: ATCCTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGGGAGGGCCCACCCTGGCCACCACCCCTGAACCTTGGATACATACTCCGAAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR CCA 90 bp CCTTGGCGTAAGTATACAAACCCCGAGATGCAGCAGACCCAGGGCTaGGCGTGGGGCATTCCTCAGAGTGCCAGTGGCCACAAGACACTA +
Preference number: 1 (lower is better)
Translates to: PWRKYTNPEMQQTQG*AWGIPQSASGHKTL
Trigger: TAGTGTCTTGTGGCCACTGGCACTCTGAGGAATGCCCCACGCCCAGCCCTGGGTCTGCTGCATCTCGGGGTTTGTATACTTACGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR CCA 90 bp GTATGTATCCAAGGTTCAGGGGTGGTGGCCAGGGTGGGCCCTCCCTaGCTTTCTCTGCTCCATCTTCAAGCCCCAGGATTCCATGCAAAG +
Preference number: 1 (lower is better)
Translates to: VCIQGSGVVARVGPP*LSLLHLQAPGFHAK
Trigger: CTTTGCATGGAATCCTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGGGAGGGCCCACCCTGGCCACCACCCCTGAACCTTGGATACATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR TCA 90 bp CAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTCTGCTCTaGGTGTGGCCTGCACAGCCAGGGGACTTCCAAATGCTCCTTCTC +
Preference number: 1 (lower is better)
Translates to: QMNRQSALIQRWALL*VWPAQPGDFQMLLL
Trigger: GAGAAGGAGCATTTGGAAGTCCCCTGGCTGTGCAGGCCACACTCAGAGCAGAGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR GCA 90 bp AGCTGGCCAAGCAGGAGGGCATCCTCTTCAAGGATGTCCTGTCCCTaGAGCTGGACTTTCGGAGTATGTATCCAAGGTTCAGGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: SWPSRRASSSRMSCP*SWTFGVCIQGSGVV
Trigger: CACCACCCCTGAACCTTGGATACATACTCCGAAAGTCCAGCTGCAGGGACAGGACATCCTTGAAGAGGATGCCCTCCTGCTTGGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR GCA 90 bp GGGGAAGCGGCTGTCACAGATGAATTCACAGATGAATCGGCAGAGTaGGCTGATACAAAGGTGGGCTCTGCTCTGAGTGTGGCCTGCACA +
Preference number: 1 (lower is better)
Translates to: GEAAVTDEFTDESAE*ADTKVGSALSVACT
Trigger: TGTGCAGGCCACACTCAGAGCAGAGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAATTCATCTGTGACAGCCGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 90 bp AGAGCATTCAGGTGCTCTGCCTTACCAAGCGCCTCTGCTTCAAGGTaGAAGCAACTGCTTACTGAGTGCTTCAGTGGCCTTGCCCTGCTC +
Preference number: 1 (lower is better)
Translates to: RAFRCSALPSASASR*KQLLTECFSGLALL
Trigger: GAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAAGGCAGAGCACCTGAATGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR TCA 90 bp CTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACTCAATCCCTTTTCTCAGCCCATTCG +
Preference number: 1 (lower is better)
Translates to: LSGAGQSGPRLAPWT*AGQLQTQSLFSAHS
Trigger: CGAATGGGCTGAGAAAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR TCA 90 bp GTGCTCACTGGGAACAGAGACAGACGAGATGTGGTCCCTTTGGAGTaGCCAGCACACACCCCCATAGTCAAGGCACAAGGAGACAAGAAG +
Preference number: 1 (lower is better)
Translates to: VLTGNRDRRDVVPLE*PAHTPIVKAQGDKK
Trigger: CTTCTTGTCTCCTTGTGCCTTGACTATGGGGGTGTGTGCTGGTCACTCCAAAGGGACCACATCTCGTCTGTCTCTGTTCCCAGTGAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR GCA 90 bp GGGCTCTGCTCTGAGTGTGGCCTGCACAGCCAGGGGACTTCCAAATaGTCCTTCTCTGTTCAGCTCCCTTTGTGTTCACGGTATAATGAC +
Preference number: 1 (lower is better)
Translates to: GLCSECGLHSQGTSK*SFSVQLPLCSRYND
Trigger: GTCATTATACCGTGAACACAAAGGGAGCTGAACAGAGAAGGAGCATTTGGAAGTCCCCTGGCTGTGCAGGCCACACTCAGAGCAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR TCA 90 bp TGCCTTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTaGGTGCTTCAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCATT +
Preference number: 1 (lower is better)
Translates to: CLTKRLCFKVEATAY*VLQWPCPALGNDSI
Trigger: AATGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR GCA 90 bp CTCCACTTGCAAATCCTCCCTGCAATACAGAGCATTCAGGTGCTCTaGCTTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTAC +
Preference number: 1 (lower is better)
Translates to: LHLQILPAIQSIQVL*LTKRLCFKVEATAY
Trigger: GTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAAGGCAGAGCACCTGAATGCTCTGTATTGCAGGGAGGATTTGCAAGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 90 bp AGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTaGGCAGCTACAAACTCAATCCCTTTTCTCAGCCCATTCGATGAT +
Preference number: 1 (lower is better)
Translates to: RRRSIRPKVSTMDLS*AATNSIPFLSPFDD
Trigger: ATCATCGAATGGGCTGAGAAAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR GCA 90 bp TTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTaGTTCAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCATTTCAA +
Preference number: 1 (lower is better)
Translates to: LPSASASRWKQLLTE*FSGLALLWEMTPFQ
Trigger: TTGAAATGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 90 bp AGTGCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCATaGGAGATAAGCTGTTTAACCCTCTGGAACCTAGACAAAACAGGA +
Preference number: 1 (lower is better)
Translates to: SARFLTTGSRYPNTP*EISCLTLWNLDKTG
Trigger: TCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR CCA 90 bp AGACAGCAAAGTCAGGAACAAGAGAAGGCAGAAGGATACTCCAAATaGAATCCAAAGTTTGGTTTTGTTGACATGAGTGGCAGTGGAGAG +
Preference number: 1 (lower is better)
Translates to: RQQSQEQEKAEGYSK*NPKFGFVDMSGSGE
Trigger: CTCTCCACTGCCACTCATGTCAACAAAACCAAACTTTGGATTCCATTTGGAGTATCCTTCTGCCTTCTCTTGTTCCTGACTTTGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR GCA 90 bp GCTGGCCAGGCCAGGGGCACCTGGGTTGAAATCAGGCTGACCTCCGGACAGCCGCGGGGGAGCTGTGGCTaGACTGCCTCTATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: AGQARGTWVEIRLTSGQPRGSCG*TASILL
Trigger: CAGCAGGATAGAGGCAGTGCAGCCACAGCTCCCCCG...CGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR-3UTR CCA 90 bp CCTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTCCAAGGTTCAGGGGTaGTGGCCAGGGTGGGCCCTC +
Preference number: 2 (lower is better)
Translates to: PQSASGHKTLQGETSARPSKVQG*WPGWAL
Trigger: GAGGGCCCACCCTGGCCACCACCCCTGAACCTTGGA...GGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR TCA 90 bp CCGGGCAGCTGGCCAAGCAGGAGGGCATCCTCTTCAAGGATGTCCTGTCCCTGCGTGGTCCCTTTGGAGTaGCCAGCACACACCCCCATA +
Preference number: 2 (lower is better)
Translates to: PGSWPSRRASSSRMSCPCVVPLE*PAHTPI
Trigger: TATGGGGGTGTGTGCTGGTCACTCCAAAGGGACCAC...GCAGGGACAGGACATCCTTGAAGAGGATGCCCTCCTGCTTGGCCAGCTGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR TCA 90 bp CAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTGGCCCTCCTCCTCCAGGCGTaGCAGCAGCACGGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QAPLLQGGSNCLLSASVALLLQA*QQHGLL
Trigger: GAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAG...GGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CCA 90 bp GGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGCCCTCAAACAGAGATGACATGCTCAAGCTaGCCGTCGGGGACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GHKTLQGETSARPCPQTEMTCSS*PSGTRA
Trigger: GGCCCTGGTCCCCGACGGCCAGCTTGAGCATGTCAT...CTCTGTTTGAGGGCAGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR TCA 90 bp CTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTCGCAGGTGGCTGGTTTaGGAGGTGGCTTCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LRVPVATRHYRGKPQPDPRRWLV*EVASGS
Trigger: GCTTCCTGAAGCCACCTCTCAAACCAGCCACCTGCG...AGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR TCA 90 bp TCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGCGATGGAGCCGAGGGTaGTGGACGATGACATGCTCA +
Preference number: 2 (lower is better)
Translates to: SECQWPQDTTGGNLSQTLRWSRG*WTMTCS
Trigger: TGAGCATGTCATCGTCCATCACCCTCGGCTCCATCG...CAGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR GCA 90 bp CCTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCCTCCCTGGCTTTCTCTaGTCCATCTTCAAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: PQSASGHKTLQGETSARPLPGFL*SIFKPQ
Trigger: CTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGGGAG...GGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR CCA 90 bp CCCAGTGCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCATGGGAGCAGGCCAGGGGCACCTaGGTTGAAATCAGGCTGACC +
Preference number: 2 (lower is better)
Translates to: PSARFLTTGSRYPNTPWEQARGT*VEIRLT
Trigger: GGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTG...CTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR-3UTR CCA 90 bp CCGTGCAACTCGATGGAGCCGAGGGTGATGGACGATGACATGCTCAAGCTGGCCGCAGGTAAGAGAAGCTaGCCCCAAACTGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PCNSMEPRVMDDDMLKLAAGKRS*PQTGWK
Trigger: CTTCCAGCCAGTTTGGGGCCAGCTTCTCTTACCTGC...GGCCAGCTTGAGCATGTCATCGTCCATCACCCTCGGCTCCATCGAGTTGCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR TCA 90 bp TGTTTCCCCAGTGCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCACTGCCTCTATCCTGCTaGGTGTGCTCTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: CFPSARFLTTGSRYPNTPLPLSC*VCSAQA
Trigger: GGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAG...TGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGGGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR-3UTR TCA 90 bp CCGGGCAGCTGGCCAAGCAGGAGGGCATCCTCTTCAAGGATGTCCTGTCCCTGCAGTGTCTTCATCATTTaGATATCCACGACGCTCCGG +
Preference number: 2 (lower is better)
Translates to: PGSWPSRRASSSRMSCPCSVFII*ISTTLR
Trigger: CCGGAGCGTCGTGGATATTCAAATGATGAAGACACT...GCAGGGACAGGACATCCTTGAAGAGGATGCCCTCCTGCTTGGCCAGCTGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR GCA 90 bp CTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTAGCCCCAGGATTCCATaGAAAGTCCACGGTCGAGGT +
Preference number: 2 (lower is better)
Translates to: LRVPVATRHYRGKPQPDPSPRIP*KVHGRG
Trigger: ACCTCGACCGTGGACTTTGCATGGAATCCTGGGGCT...AGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR GCA 90 bp TCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGAAGATGAACCAGCCGTaGAACTCGATGGAGCCGAGG +
Preference number: 2 (lower is better)
Translates to: SECQWPQDTTGGNLSQTLKMNQP*NSMEPR
Trigger: CCTCGGCTCCATCGAGTTGCACGGCTGGTTCATCTT...CAGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR CCA 90 bp TCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGTTGCACGCAGGTGGCTaGTTTGAGAGGTGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: SECQWPQDTTGGNLSQTLLHAGG*FERWLQ
Trigger: CTGAAGCCACCTCTCAAACCAGCCACCTGCGTGCAA...CAGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR GCA 90 bp CAACTGCTTACTGAGTGCTTCAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCACCCTGGGCAGCCATCTaGCTTCACCCTGGAGGAAAC +
Preference number: 2 (lower is better)
Translates to: QLLTECFSGLALLWEMTPPWAAI*LHPGGN
Trigger: GTTTCCTCCAGGGTGAAGGCAGATGGCTGCCCAGGG...TGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR GCA 90 bp AAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCACGGGGGAGCTGTGGCTaGACTGCCTCTATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: KVTCTIHLLHSLLARPGARGSCG*TASILL
Trigger: CAGCAGGATAGAGGCAGTGCAGCCACAGCTCCCCCG...TGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR-3UTR CCA 90 bp AAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCAAGGCCGGGGGAGCTGTaGCTGCACTGCCTCTATCCT +
Preference number: 2 (lower is better)
Translates to: KVTCTIHLLHSLLARPGARPGEL*LHCLYP
Trigger: AGGATAGAGGCAGTGCAGCCACAGCTCCCCCGGCCT...TGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR-3UTR TCA 90 bp CACTCCACTTGCAAATCCTCCCTGCAATACAGAGCATTCAGGTGCTCTGCCTTAAGGTGGGCTCTGCTCTaGGTGTGGCCTGCACAGCCA +
Preference number: 2 (lower is better)
Translates to: HSTCKSSLQYRAFRCSALRWALL*VWPAQP
Trigger: TGGCTGTGCAGGCCACACTCAGAGCAGAGCCCACCT...TAAGGCAGAGCACCTGAATGCTCTGTATTGCAGGGAGGATTTGCAAGTGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR TCA 90 bp GCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTGGCCTTGCCTGGGGTGAACACCCATaGGTTTGTAGGGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: ASASRWKQLLTECFSGLAWGEHP*VCRACC
Trigger: ACAGCAGGCCCTACAAACTCATGGGTGTTCACCCCA...GGCAAGGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR TCA 90 bp GTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCTGCCTCTATCCTGCTaGGTGTGCTCTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: VERKSLAQFISYIHCWPGLPLSC*VCSAQA
Trigger: GGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAG...GCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR-3UTR TCA 90 bp CGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCACAGGGGCACCTGGGTTaGAATCAGGCTGACCTCCGG +
Preference number: 2 (lower is better)
Translates to: REKVTCTIHLLHSLLARPQGHLG*NQADLR
Trigger: CCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTG...TGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR-3UTR TCA 90 bp TCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGGAAAGAAGCAGGCCGTaGAGGAAGAATGCGGTGTTT +
Preference number: 2 (lower is better)
Translates to: SECQWPQDTTGGNLSQTLERSRP*RKNAVF
Trigger: AAACACCGCATTCTTCCTTCACGGCCTGCTTCTTTC...CAGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR GCA 90 bp TGTTTCCCCAGTGCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCAATCTCCTACATTCACTaGTGGCCAGGCCAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: CFPSARFLTTGSRYPNTPISYIH*WPGQGH
Trigger: GTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGAT...TGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR-3UTR CCA 90 bp CCTCATGCTTCCACCCAGCAGGCAGAGGTTTTGGGCAAGTTAGACTTGAGAGTACCTGCCCTGTGCAGTTaGGGAAGCGGCTGTCACAGA +
Preference number: 2 (lower is better)
Translates to: PHASTQQAEVLGKLDLRVPALCS*GSGCHR
Trigger: TCTGTGACAGCCGCTTCCCCAACTGCACAGGGCAGG...TACTCTCAAGTCTAACTTGCCCAAAACCTCTGCCTGCTGGGTGGAAGCATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CCA 90 bp CCTGGCTTTCTCTGCTCCATCTTCAAGCCCCAGGATTCCATGCAAAGTCCACGGAAGCTGGCCCCAAACTaGCTGGAAGCAGAGGTAAGG +
Preference number: 2 (lower is better)
Translates to: PGFLCSIFKPQDSMQSPRKLAPN*LEAEVR
Trigger: CCTTACCTCTGCTTCCAGCCAGTTTGGGGCCAGCTT...CCGTGGACTTTGCATGGAATCCTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR CCA 90 bp CCAGGATTCCATGCAAAGTCCACGGTCGAGGTTCCCACATCAGCATTAGGGCCTGAGATGTGGTCCCTTTaGAGTGACCAGCACACACCC +
Preference number: 2 (lower is better)
Translates to: PGFHAKSTVEVPTSALGPEMWSL*SDQHTP
Trigger: GGGTGTGTGCTGGTCACTCCAAAGGGACCACATCTC...AGGCCCTAATGCTGATGTGGGAACCTCGACCGTGGACTTTGCATGGAATCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR CAA 90 bp GCTGGAAGCAGAGGTAAGGCAGGGACTTGCACGCAGGTGGCTGGTTaGAGAGGTGGCTTCAGGAAGCTTTTCTCAGCCCATTCGATGATT +
Preference number: 2 (lower is better)
Translates to: AGSRGKAGTCTQVAG*RGGFRKLFSAHSMI
Trigger: AATCATCGAATGGGCTGAGAAAAGCTTCCTGAAGCCACCTCTCAAACCAGCCACCTGCGTGCAAGTCCCTGCCTTACCTCTGCTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR GCA 90 bp CAGCTTTTTGTCGATAAAGATACGATTGTTAATGCTGTCGGGGCATCGCACGACGACAGCAGCACGGCCTaGTCCACTGTCAGGCGCAGG +
Preference number: 2 (lower is better)
Translates to: QLFVDKDTIVNAVGASHDDSSTA*STVRRR
Trigger: CCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTC...GTCGTGCGATGCCCCGACAGCATTAACAATCGTATCTTTATCGACAAAAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR GCA 90 bp CAACTGCTTACTGAGTGCTTCAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCAGCTTCCAGCGGGGACTaGAAAGTAACACCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: QLLTECFSGLALLWEMTPASSGD*KVTPWL
Trigger: CAACCAGGGTGTTACTTTGCAGTCCCCGCTGGAAGC...TGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CAA 90 bp ACTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAACTCAATCCCTTTTCTCAGCCCATTC +
Preference number: 2 (lower is better)
Translates to: TVRRRSIRPKVSTMD*SWAATNSIPFLSPF
Trigger: GAATGGGCTGAGAAAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR TCA 90 bp TTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTATCGGCAGAGTGCGCTaGTACAAAGGTGGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: LPSASASRWKQLLTECFSIGRVR*YKGGLC
Trigger: GCAGAGCCCACCTTTGTATCAGCGCACTCTGCCGAT...ACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR TCA 90 bp CGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGTTGAAATCAGGCTaGCCTCCGGACAGCCGTACT +
Preference number: 2 (lower is better)
Translates to: REKVTCTIHLLHSLLARPGLKSG*PPDSRT
Trigger: AGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCC...TGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR-3UTR TCA 90 bp TCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGGGCACCTGGGTTaGAATCAGGCTGACCTCCGG +
Preference number: 2 (lower is better)
Translates to: SESRESHLHNSSPTFTAGQGHLG*NQADLR
Trigger: CCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTG...GCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR-3UTR GCA 90 bp GACTTTGTAGAGCCTTCAGAATACTTTGTGCCCAGCAAATCTTTAGGAGGGGCCCCTCAGCCAGCCTCATaGTTCCACCCAGCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: DFVEPSEYFVPSKSLGGAPQPAS*FHPAGR
Trigger: TCTGCCTGCTGGGTGGAAGCATGAGGCTGGCTGAGG...GGCCCCTCCTAAAGATTTGCTGGGCACAAAGTATTCTGAAGGCTCTACAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR GCA 90 bp AAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCAGAGCTGTGGCTGCACTaGCTCTATCCTGCTGAGTGT +
Preference number: 2 (lower is better)
Translates to: KVTCTIHLLHSLLARPGAELWLH*LYPAEC
Trigger: ACACTCAGCAGGATAGAGGCAGTGCAGCCACAGCTC...TGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR-3UTR CCA 90 bp CAGATATCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTAGAAGGCCGGGGGAGCTGTaGCTGCACTGCCTCTATCCT +
Preference number: 2 (lower is better)
Translates to: QISKHAMGDKLFNPLEPRRPGEL*LHCLYP
Trigger: AGGATAGAGGCAGTGCAGCCACAGCTCCCCCGGCCT...TCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR-3UTR GCA 90 bp AAATCCTCCCTGCAATACAGAGCATTCAGGTGCTCTGCCTTACCAAGCGCCTCTGATGAATCGGCAGAGTaGGCTGATACAAAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: KSSLQYRAFRCSALPSASDESAE*ADTKVG
Trigger: GCCCACCTTTGTATCAGCGCACTCTGCCGATTCATC...AGAGGCGCTTGGTAAGGCAGAGCACCTGAATGCTCTGTATTGCAGGGAGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CCA 90 bp GCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTGGCCTTGCCACCATGGACTTGAGCTaGGCAGCTACAAACTCAATC +
Preference number: 2 (lower is better)
Translates to: ASASRWKQLLTECFSGLATMDLS*AATNSI
Trigger: GATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGT...GGCAAGGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CCA 90 bp CACTCCACTTGCAAATCCTCCCTGCAATACAGAGCATTCAGGTGCTCTGCCTTACATGGAAATCCTCCCTaGTACTCCTCCTCCAGGCGT +
Preference number: 2 (lower is better)
Translates to: HSTCKSSLQYRAFRCSALHGNPP*YSSSRR
Trigger: ACGCCTGGAGGAGGAGTACCAGGGAGGATTTCCATG...TAAGGCAGAGCACCTGAATGCTCTGTATTGCAGGGAGGATTTGCAAGTGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR GCA 90 bp GACTTTGTAGAGCCTTCAGAATACTTTGTGCCCAGCAAATCTTTAGGAGGGGCCACCCTGGAGGAAACATaGTTCCAGCGGGGACTGCAA +
Preference number: 2 (lower is better)
Translates to: DFVEPSEYFVPSKSLGGATLEET*FQRGLQ
Trigger: TTGCAGTCCCCGCTGGAAGCATGTTTCCTCCAGGGT...GGCCCCTCCTAAAGATTTGCTGGGCACAAAGTATTCTGAAGGCTCTACAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR TCA 90 bp TATCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTAGACAAAGGGTTGAAATCAGGCTaGCCTCCGGACAGCCGTACT +
Preference number: 2 (lower is better)
Translates to: YPNTPWEISCLTLWNLDKGLKSG*PPDSRT
Trigger: AGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCC...TTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR-3UTR GCA 90 bp GACTTTGTAGAGCCTTCAGAATACTTTGTGCCCAGCAAATCTTTAGGAGGGGCCTACAGAGCATTCAGGTaGTCTGCCTTACCAAGCGCC +
Preference number: 2 (lower is better)
Translates to: DFVEPSEYFVPSKSLGGAYRAFR*SALPSA
Trigger: GGCGCTTGGTAAGGCAGAGCACCTGAATGCTCTGTA...GGCCCCTCCTAAAGATTTGCTGGGCACAAAGTATTCTGAAGGCTCTACAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR GCA 90 bp CCCAGTGCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCATGGGAGCGAGAGAAAGTCACTTaGACAATTCATCTCCTACAT +
Preference number: 2 (lower is better)
Translates to: PSARFLTTGSRYPNTPWEREKVT*TIHLLH
Trigger: ATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCG...CTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR-3UTR CCA 90 bp GACTTTGTAGAGCCTTCAGAATACTTTGTGCCCAGCAAATCTTTAGGAGGGGCCGGCCTTGCCCTGCTCTaGGAAATGACTCCATTTCAA +
Preference number: 2 (lower is better)
Translates to: DFVEPSEYFVPSKSLGGAGLALL*EMTPFQ
Trigger: TTGAAATGGAGTCATTTCCCAGAGCAGGGCAAGGCC...GGCCCCTCCTAAAGATTTGCTGGGCACAAAGTATTCTGAAGGCTCTACAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR TCA 90 bp TCTTGGTGTACACGTTTAATAGACAGGGTGAGTCAATCCCAAGCCATCCTAGCATTAGCACCATGGACTTaGGCTGGGCAGCTACAAACT +
Preference number: 2 (lower is better)
Translates to: SWCTRLIDRVSQSQAILALAPWT*AGQLQT
Trigger: AGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAA...TGCTAGGATGGCTTGGGATTGACTCACCCTGTCTATTAAACGTGTACACCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR GCA 90 bp AAAGCCTTCAGGCTGAGGCTGAAGAACACAAATAGAGTTGTCTGTGGATTACATGAGCTGTGGCTGCACTaGCTCTATCCTGCTGAGTGT +
Preference number: 2 (lower is better)
Translates to: KAFRLRLKNTNRVVCGLHELWLH*LYPAEC
Trigger: ACACTCAGCAGGATAGAGGCAGTGCAGCCACAGCTC...ATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR-3UTR CCA 90 bp AGCATTCAGGTGCTCTGCCTTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTAGGCCTATTAGAAGGTaGTTGTTTCTAACAACTTTT +
Preference number: 2 (lower is better)
Translates to: SIQVLCLTKRLCFKVEATRPIRR*LFLTTF
Trigger: AAAAGTTGTTAGAAACAACCACCTTCTAATAGGCCT...AGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAAGGCAGAGCACCTGAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CAA 90 bp CCACAGTGTCAACACCTAGAACCAGTGAGGCCTATTAGAAGGTGGTaGTTTCTAACAACTTTTTACAAGACAGCAAAGTCAGGAACAAGA +
Preference number: 2 (lower is better)
Translates to: PQCQHLEPVRPIRRW*FLTTFYKTAKSGTR
Trigger: TCTTGTTCCTGACTTTGCTGTCTTGTAAAAAGTTGTTAGAAACAACCACCTTCTAATAGGCCTCACTGGTTCTAGGTGTTGACACTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CCA 90 bp GACTTTGTAGAGCCTTCAGAATACTTTGTGCCCAGCAAATCTTTAGGAGGGGCCGAAGGATACTCCAAATaGAATCCAAAGTTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: DFVEPSEYFVPSKSLGGAEGYSK*NPKFGF
Trigger: AAAACCAAACTTTGGATTCCATTTGGAGTATCCTTC...GGCCCCTCCTAAAGATTTGCTGGGCACAAAGTATTCTGAAGGCTCTACAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CCA 90 bp AGAACACAAATAGAGTTGTCTGTGGATTACATGATTGTTTCCCCAGTGCAAGGTAGCTGTTTAACCCTCTaGAACCTAGACAAAACAGGA +
Preference number: 2 (lower is better)
Translates to: RTQIELSVDYMIVSPVQGSCLTL*NLDKTG
Trigger: TCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCT...ACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR TCA 72 bp GCCGTGCAACTCGATGGAGCCGAGGGTGATGGACGATaGCATGCTCAAGCTGGCCGTCGGGGACCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: AVQLDGAEGDGR*HAQAGRRGPGP
Trigger: GGGCCCTGGTCCCCGACGGCCAGCTTGAGCATGTCATCGTCCATCACCCTCGGCTCCATCGAGTTGCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR TCA 72 bp CTGGCCAGGCCAGGGGCACCTGGGTTGAAATCAGGCTaGCCTCCGGACAGCCGTACTAGCGCACTGTGTCTC +
Preference number: 3 (lower is better)
Translates to: LARPGAPGLKSG*PPDSRTSALCL
Trigger: GAGACACAGTGCGCTAGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR CCA 72 bp CCAGGGCTGGGCGTGGGGCATTCCTCAGAGTGCCAGTaGCCACAAGACACTACAGGGGGAAACCTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: PGLGVGHSSECQ*PQDTTGGNLSQ
Trigger: CTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGGAATGCCCCACGCCCAGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR TCA 72 bp ACATGGAAATCCTCCCTGGTACTCCTCCTCCAGGCGTaGCAGCAGCACGGCCTGCTCCACTGTCAGGCGCAG +
Preference number: 3 (lower is better)
Translates to: TWKSSLVLLLQA*QQHGLLHCQAQ
Trigger: CTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGGGAGGATTTCCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 72 bp CAAGGTTCAGGGGTGGTGGCCAGGGTGGGCCCTCCCTaGCTTTCTCTGCTCCATCTTCAAGCCCCAGGATTC +
Preference number: 3 (lower is better)
Translates to: QGSGVVARVGPP*LSLLHLQAPGF
Trigger: GAATCCTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGGGAGGGCCCACCCTGGCCACCACCCCTGAACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR-3UTR CAA 90 bp CCTGGCTTTCTCTGCTCCATCTTCAAGCCCCAGGATTCCATGCAAAGTCCACGGACGCAGGTGGCTGGTTaGAGAGGTGGCTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: PGFLCSIFKPQDSMQSPRTQVAG*RGGFRK
Trigger: CTTCCTGAAGCCACCTCTCAAACCAGCCACCTGCGT...CCGTGGACTTTGCATGGAATCCTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR TCA 72 bp GTGGCAGTGGAGAGACAACTGTGGGGTGAACACCCATaGGTTTGTAGGGCCTGCTGTCTTCAGAGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: VAVERQLWGEHP*VCRACCLQSSL
Trigger: GAGGCTGCTCTGAAGACAGCAGGCCCTACAAACTCATGGGTGTTCACCCCACAGTTGTCTCTCCACTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR GCA 72 bp GCTGATACAAAGGTGGGCTCTGCTCTGAGTGTGGCCTaGACAGCCAGGGGACTTCCAAATGCTCCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: ADTKVGSALSVA*TARGLPNAPSL
Trigger: CAGAGAAGGAGCATTTGGAAGTCCCCTGGCTGTGCAGGCCACACTCAGAGCAGAGCCCACCTTTGTATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR GCA 72 bp CCTTCACCCTGGAGGAAACATGCTTCCAGCGGGGACTaGAAAGTAACACCCTGGTTGGCCCTTTCCCCACAA +
Preference number: 3 (lower is better)
Translates to: PSPWRKHASSGD*KVTPWLALSPQ
Trigger: TTGTGGGGAAAGGGCCAACCAGGGTGTTACTTTGCAGTCCCCGCTGGAAGCATGTTTCCTCCAGGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 72 bp AAACATGCTTCCAGCGGGGACTGCAAAGTAACACCCTaGTTGGCCCTTTCCCCACAACACCTGCCCTGTGCA +
Preference number: 3 (lower is better)
Translates to: KHASSGDCKVTP*LALSPQHLPCA
Trigger: TGCACAGGGCAGGTGTTGTGGGGAAAGGGCCAACCAGGGTGTTACTTTGCAGTCCCCGCTGGAAGCATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR TCA 72 bp GGGAACAGAGACAGACGAGATGTGGTCCCTTTGGAGTaGCCAGCACACACCCCCATAGTCAAGGCACAAGGA +
Preference number: 3 (lower is better)
Translates to: GNRDRRDVVPLE*PAHTPIVKAQG
Trigger: TCCTTGTGCCTTGACTATGGGGGTGTGTGCTGGTCACTCCAAAGGGACCACATCTCGTCTGTCTCTGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR GCA 72 bp TCTGAGTGTGGCCTGCACAGCCAGGGGACTTCCAAATaGTCCTTCTCTGTTCAGCTCCCTTTGTGTTCACGG +
Preference number: 3 (lower is better)
Translates to: SECGLHSQGTSK*SFSVQLPLCSR
Trigger: CCGTGAACACAAAGGGAGCTGAACAGAGAAGGAGCATTTGGAAGTCCCCTGGCTGTGCAGGCCACACTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR GCA 72 bp CCTTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTaGTTACTGAGTGCTTCAGTGGCCTTGCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: PYQAPLLQGGSN*LLSASVALPCS
Trigger: AGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR TCA 72 bp AAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTaGGTGCTTCAGTGGCCTTGCCCTGCTCTGGGAAAT +
Preference number: 3 (lower is better)
Translates to: KRLCFKVEATAY*VLQWPCPALGN
Trigger: ATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 72 bp AGGTGCTCTGCCTTACCAAGCGCCTCTGCTTCAAGGTaGAAGCAACTGCTTACTGAGTGCTTCAGTGGCCTT +
Preference number: 3 (lower is better)
Translates to: RCSALPSASASR*KQLLTECFSGL
Trigger: AAGGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAAGGCAGAGCACCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR GCA 72 bp CAAATCCTCCCTGCAATACAGAGCATTCAGGTGCTCTaGCTTACCAAGCGCCTCTGCTTCAAGGTGGAAGCA +
Preference number: 3 (lower is better)
Translates to: QILPAIQSIQVL*LTKRLCFKVEA
Trigger: TGCTTCCACCTTGAAGCAGAGGCGCTTGGTAAGGCAGAGCACCTGAATGCTCTGTATTGCAGGGAGGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 72 bp CTGCTTACTGAGTGCTTCAGTGGCCTTGCCCTGCTCTaGGAAATGACTCCATTTCAACCATCCCAGGCAACA +
Preference number: 3 (lower is better)
Translates to: LLTECFSGLALL*EMTPFQPSQAT
Trigger: TGTTGCCTGGGATGGTTGAAATGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CAA 90 bp TTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTCTGCTCTGAGTGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAAC +
Preference number: 3 (lower is better)
Translates to: FTDESAECADTKVGSALSVSTMD*SWAATN
Trigger: GTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAAC...ACTCAGAGCAGAGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CAA 90 bp CCCAGTGCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCATGGGAGTCGAGAGAAAGTCACTaGCACAATTCATCTCCTACA +
Preference number: 3 (lower is better)
Translates to: PSARFLTTGSRYPNTPWESRESH*HNSSPT
Trigger: TGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGA...CTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR TCA 72 bp GCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACTCAATCCCTTTTCTCA +
Preference number: 3 (lower is better)
Translates to: AGQSGPRLAPWT*AGQLQTQSLFS
Trigger: TGAGAAAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR TCA 72 bp GTGGATTACATGATTGTTTCCCCAGTGCAAGGTTCCTaGCCACAGGCAGCAGATATCCAAACACGCCATGGG +
Preference number: 3 (lower is better)
Translates to: VDYMIVSPVQGS*PQAADIQTRHG
Trigger: CCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGGGAAACAATCATGTAATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR CCA 72 bp TCAATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTaGGCAGCTACAAACTCAATCCCTTTTCTCAGCCCA +
Preference number: 3 (lower is better)
Translates to: SIRPKVSTMDLS*AATNSIPFLSP
Trigger: TGGGCTGAGAAAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 72 bp TTCCTGACCACAGGCAGCAGATATCCAAACACGCCATaGGAGATAAGCTGTTTAACCCTCTGGAACCTAGAC +
Preference number: 3 (lower is better)
Translates to: FLTTGSRYPNTP*EISCLTLWNLD
Trigger: GTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR-3UTR CAA 90 bp CAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCATTTCAACCATCCCAGGCAACTCACTCACCAGCTTTTaGTCGATAAAGATACGATTG +
Preference number: 3 (lower is better)
Translates to: QWPCPALGNDSISTIPGNSLTSF*SIKIRL
Trigger: CAATCGTATCTTTATCGACAAAAAGCTGGTGAGTGA...GTTGCCTGGGATGGTTGAAATGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CAA 90 bp TTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTTTGGGCAAGTTAGACTaGAGAGTAATTGAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: LPSASASRWKQLLTECFSLGKLD*RVIERE
Trigger: TTCTCTCTCAATTACTCTCAAGTCTAACTTGCCCAA...ACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 72 bp AGTCAGGAACAAGAGAAGGCAGAAGGATACTCCAAATaGAATCCAAAGTTTGGTTTTGTTGACATGAGTGGC +
Preference number: 3 (lower is better)
Translates to: SQEQEKAEGYSK*NPKFGFVDMSG
Trigger: GCCACTCATGTCAACAAAACCAAACTTTGGATTCCATTTGGAGTATCCTTCTGCCTTCTCTTGTTCCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR-3UTR CAA 90 bp AAGGTGGTTGTTTCTAACAACTTTTTACAAGACAGCAAAGTCAGGAACAAGAGATCTGTTCAGCTCCCTTaGTGTTCACGGTATAATGAC +
Preference number: 3 (lower is better)
Translates to: KVVVSNNFLQDSKVRNKRSVQLP*CSRYND
Trigger: GTCATTATACCGTGAACACAAAGGGAGCTGAACAGA...TCTCTTGTTCCTGACTTTGCTGTCTTGTAAAAAGTTGTTAGAAACAACCACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CCA 72 bp TGTCAACACCTAGAACCAGTGAGGCCTATTAGAAGGTaGTTGTTTCTAACAACTTTTTACAAGACAGCAAAG +
Preference number: 3 (lower is better)
Translates to: CQHLEPVRPIRR*LFLTTFYKTAK
Trigger: CTTTGCTGTCTTGTAAAAAGTTGTTAGAAACAACCACCTTCTAATAGGCCTCACTGGTTCTAGGTGTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp GGCCAGGCCAGGGGCACCTGGGTTGAAATCAGGCTGACCTCCGGACAGCCGTACGGCGTAAGCCCGGGCTaGAGACGGGATGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GQARGTWVEIRLTSGQPYGVSPG*RRDGWP
Trigger: GGGCCAACCATCCCGTCTCCAGCCCGGGCTTACGCC...GTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp GGCCAGGCCAGGGGCACCTGGGTTGAAATCAGGCTGACCTCCGGACAGCCGTACAGGCCGGGGGAGCTGTaGCTGCACTGCCTCTATCCT +
Preference number: 4 (lower is better)
Translates to: GQARGTWVEIRLTSGQPYRPGEL*LHCLYP
Trigger: AGGATAGAGGCAGTGCAGCCACAGCTCCCCCGGCCT...GTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR GCA 90 bp GGCCAGGCCAGGGGCACCTGGGTTGAAATCAGGCTGACCTCCGGACAGCCGTACCTGCTGAGTGTGCTCTaGCCAGGCCTCACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GQARGTWVEIRLTSGQPYLLSVL*PGLTPS
Trigger: TGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAG...GTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp GGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGCCCTCAAACAGAGGGCGTAAGCCCGGGCTaGAGACGGGATGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GHKTLQGETSARPCPQTEGVSPG*RRDGWP
Trigger: GGGCCAACCATCCCGTCTCCAGCCCGGGCTTACGCC...CTCTGTTTGAGGGCAGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR GCA 90 bp GGGAATCTCAGGGTGACGCTGAGGCCGAGTCCCCAAAAGCCAAGGAAGCCAGCCCCACTCAGTAGCCACTaGAATGGCCAGGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GNLRVTLRPSPQKPRKPAPLSSH*NGQGLA
Trigger: AGCGAGGCCCTGGCCATTGCAGTGGCTACTGAGTGG...GGCTGGCTTCCTTGGCTTTTGGGGACTCGGCCTCAGCGTCACCCTGAGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp ACGGCCTGCTCCACTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGATGTCCTGGGTGAGGTaGCCCCTGGGCAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: TACSTVRRRSIRPKVSTMMSWVR*PLGSHL
Trigger: CAGATGGCTGCCCAGGGGGCACCTCACCCAGGACAT...CATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp GCTGGCCAGGCCAGGGGCACCTGGGTTGAAATCAGGCTGACCTCCGGACAGCCGTTTTGGCAGGGATGCTaGGTCCCATTATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGQARGTWVEIRLTSGQPFWQGC*VPLCWW
Trigger: CCACCAGCATAATGGGACCCAGCATCCCTGCCAAAA...CGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp GAAGCCGGTGTCCTGCAGGTAAGAGAAGCTGGCCCCAAACTGGCTGGAAGCAGATCCAAGGTTCAGGGGTaGTGGCCAGGGTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EAGVLQVREAGPKLAGSRSKVQG*WPGWAL
Trigger: GAGGGCCCACCCTGGCCACCACCCCTGAACCTTGGA...TCTGCTTCCAGCCAGTTTGGGGCCAGCTTCTCTTACCTGCAGGACACCGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp AGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCACCCGGAGCAGAGATGGATaGAGAGGGTGCCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SHLHNSSPTFTAGQARGTRSRDG*RGCRRR
Trigger: CCGCCGCCGGCACCCTCTTCATCCATCTCTGCTCCG...GGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR TCA 90 bp CCTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCCGCAGGTGGCTGGTTTaGGAGGTGGCTTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PQSASGHKTLQGETSARPRRWLV*EVASGS
Trigger: GCTTCCTGAAGCCACCTCTCAAACCAGCCACCTGCG...GGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR GCA 90 bp GGCCAGGCCAGGGGCACCTGGGTTGAAATCAGGCTGACCTCCGGACAGCCGTACTCCTTCAGGAGCTTGTaGTTGACTGTGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GQARGTWVEIRLTSGQPYSFRSL*LTVVLS
Trigger: CGAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGA...GTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp GAAGCCGGTGTCCTGCAGGTAAGAGAAGCTGGCCCCAAACTGGCTGGAAGCAGATCGCGCCCGAGGGTCTaGGAAGATGCGAGACGCGAA +
Preference number: 4 (lower is better)
Translates to: EAGVLQVREAGPKLAGSRSRPRV*EDARRE
Trigger: TTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGA...TCTGCTTCCAGCCAGTTTGGGGCCAGCTTCTCTTACCTGCAGGACACCGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp CTGGGAACAGAGACAGACGAGATGTGGTCCCTTTGGAGTGACCAGCACACACCCAAGGTTCAGGGGTGGTaGCCAGGGTGGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGTETDEMWSLWSDQHTPKVQGW*PGWALP
Trigger: AGGGAGGGCCCACCCTGGCCACCACCCCTGAACCTT...GGGTGTGTGCTGGTCACTCCAAAGGGACCACATCTCGTCTGTCTCTGTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp CCTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCGTGGTCCCTTTGGAGTaGCCAGCACACACCCCCATA +
Preference number: 4 (lower is better)
Translates to: PQSASGHKTLQGETSARPVVPLE*PAHTPI
Trigger: TATGGGGGTGTGTGCTGGTCACTCCAAAGGGACCAC...GGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp AACTCGATGGAGCCGAGGGTGATGGACGATGACATGCTCAAGCTGGCCGTCGGGCGATGGAGCCGAGGGTaGTGGACGATGACATGCTCA +
Preference number: 4 (lower is better)
Translates to: NSMEPRVMDDDMLKLAVGRWSRG*WTMTCS
Trigger: TGAGCATGTCATCGTCCATCACCCTCGGCTCCATCG...CCCGACGGCCAGCTTGAGCATGTCATCGTCCATCACCCTCGGCTCCATCGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp ACAAGAAGCCGGTGTCCTGCAGGTAAGAGAAGCTGGCCCCAAACTGGCTGGAAGATGACATGCTCAAGCTaGCCGTCGGGGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TRSRCPAGKRSWPQTGWKMTCSS*PSGTRA
Trigger: GGCCCTGGTCCCCGACGGCCAGCTTGAGCATGTCAT...CTTCCAGCCAGTTTGGGGCCAGCTTCTCTTACCTGCAGGACACCGGCTTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp CCAGGATTCCATGCAAAGTCCACGGTCGAGGTTCCCACATCAGCATTAGGGCCTACCCAGGGCTGGGCGTaGGGCATTCCTCAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: PGFHAKSTVEVPTSALGPTQGWA*GIPQSA
Trigger: GGCACTCTGAGGAATGCCCCACGCCCAGCCCTGGGT...AGGCCCTAATGCTGATGTGGGAACCTCGACCGTGGACTTTGCATGGAATCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp AAATCCTCCCTGCAATACAGAGCATTCAGGTGCTCTGCCTTACCAAGCGCCTCTCTCCTCCTCCAGGCGTaGCAGCAGCACGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KSSLQYRAFRCSALPSASLLLQA*QQHGLL
Trigger: GAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAG...AGAGGCGCTTGGTAAGGCAGAGCACCTGAATGCTCTGTATTGCAGGGAGGATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp CCGGGCAGCTGGCCAAGCAGGAGGGCATCCTCTTCAAGGATGTCCTGTCCCTGCGAAAGAAGCAGGCCGTaGAGGAAGAATGCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PGSWPSRRASSSRMSCPCERSRP*RKNAVF
Trigger: AAACACCGCATTCTTCCTTCACGGCCTGCTTCTTTC...GCAGGGACAGGACATCCTTGAAGAGGATGCCCTCCTGCTTGGCCAGCTGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR GCA 90 bp CCGTGCAACTCGATGGAGCCGAGGGTGATGGACGATGACATGCTCAAGCTGGCCAGCCCCAGGATTCCATaGAAAGTCCACGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: PCNSMEPRVMDDDMLKLASPRIP*KVHGRG
Trigger: ACCTCGACCGTGGACTTTGCATGGAATCCTGGGGCT...GGCCAGCTTGAGCATGTCATCGTCCATCACCCTCGGCTCCATCGAGTTGCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR GCA 90 bp CCTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCAAGATGAACCAGCCGTaGAACTCGATGGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PQSASGHKTLQGETSARPKMNQP*NSMEPR
Trigger: CCTCGGCTCCATCGAGTTGCACGGCTGGTTCATCTT...GGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp TTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTCTGCTCTGAGTGGCGTAAGCCCGGGCTaGAGACGGGATGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: FTDESAECADTKVGSALSGVSPG*RRDGWP
Trigger: GGGCCAACCATCCCGTCTCCAGCCCGGGCTTACGCC...ACTCAGAGCAGAGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp GGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGCCCTCAAACAGAGGCGAGACGCGAAACCTaGAGCAGGAAACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: GHKTLQGETSARPCPQTEARRET*SRKHRA
Trigger: CGCTCTGTGTTTCCTGCTCCAGGTTTCGCGTCTCGC...CTCTGTTTGAGGGCAGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp CCTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCGCAGGTAAGAGAAGCTaGCCCCAAACTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PQSASGHKTLQGETSARPAGKRS*PQTGWK
Trigger: CTTCCAGCCAGTTTGGGGCCAGCTTCTCTTACCTGC...GGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp CTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGCTGCCCGGATCAGCTaGTCCTTGTTTCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LRVPVATRHYRGKPQPDPAARIS*SLFLWV
Trigger: AACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGC...AGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp TTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTCTGCTCTGAGTAACAGATGTCCTGGGTaGGGTGCCCCCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FTDESAECADTKVGSALSNRCPG*GAPWAA
Trigger: GGCTGCCCAGGGGGCACCTCACCCAGGACATCTGTT...ACTCAGAGCAGAGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp TCAAGGCACAAGGAGACAAGAAGCCGGTGTCCTGCAGGTAAGAGAAGCTGGCCCGAGGGTGATGGACGATaGCATGCTCAAGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: SRHKETRSRCPAGKRSWPEGDGR*HAQAGR
Trigger: ACGGCCAGCTTGAGCATGTCATCGTCCATCACCCTC...GGGCCAGCTTCTCTTACCTGCAGGACACCGGCTTCTTGTCTCCTTGTGCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp CTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTAAACGTGGGGGAAGATaGACCAGCCGTGCAACTCGA +
Preference number: 4 (lower is better)
Translates to: LRVPVATRHYRGKPQPDPKRGGR*TSRATR
Trigger: TCGAGTTGCACGGCTGGTTCATCTTCCCCCACGTTT...AGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR GCA 90 bp GAAGCCGGTGTCCTGCAGGTAAGAGAAGCTGGCCCCAAACTGGCTGGAAGCAGACTCCCTGGCTTTCTCTaGTCCATCTTCAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EAGVLQVREAGPKLAGSRLPGFL*SIFKPQ
Trigger: CTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGGGAG...TCTGCTTCCAGCCAGTTTGGGGCCAGCTTCTCTTACCTGCAGGACACCGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR GCA 90 bp GGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGCCCTCAAACAGAGGGGCATTCCTCAGAGTaGCAGTGGCCACAAGACACT +
Preference number: 4 (lower is better)
Translates to: GHKTLQGETSARPCPQTEGHSSE*QWPQDT
Trigger: AGTGTCTTGTGGCCACTGGCACTCTGAGGAATGCCC...CTCTGTTTGAGGGCAGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp GTTCCCACATCAGCATTAGGGCCTACCTGGGTTACAAGGCATAGGAGCAGCACAGCCCTCAACCTCCCTTaGACGCCGCCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VPTSALGPTWVTRHRSSTALNLP*TPPSSA
Trigger: TGCGGAAGATGGCGGCGTCCAAGGGAGGTTGAGGGC...TGTGCTGCTCCTATGCCTTGTAACCCAGGTAGGCCCTAATGCTGATGTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp TCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTGGAGATGTGGTCCCTTTaGAGTGACCAGCACACACCC +
Preference number: 4 (lower is better)
Translates to: SECQWPQDTTGGNLSQTLEMWSL*SDQHTP
Trigger: GGGTGTGTGCTGGTCACTCCAAAGGGACCACATCTC...CAGGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR GCA 90 bp TTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTGACAGCAGCACGGCCTaGTCCACTGTCAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPSASASRWKQLLTECFSDSSTA*STVRRR
Trigger: CCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTC...ACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp AGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCGGGGGAGCTGTGGCTaGACTGCCTCTATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKSLAQFISYIHCWPGQGRGSCG*TASILL
Trigger: CAGCAGGATAGAGGCAGTGCAGCCACAGCTCCCCCG...CCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR GCA 90 bp AGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCACCATCTCCTACATTCACTaGTGGCCAGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SHLHNSSPTFTAGQARGTISYIH*WPGQGH
Trigger: GTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGAT...GGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR GCA 90 bp GAAGCCGGTGTCCTGCAGGTAAGAGAAGCTGGCCCCAAACTGGCTGGAAGCAGATGGGCGTATGTCCTGTaGTCACTGGGAACAGAGACA +
Preference number: 4 (lower is better)
Translates to: EAGVLQVREAGPKLAGSRWAYVL*SLGTET
Trigger: TGTCTCTGTTCCCAGTGAGCACAGGACATACGCCCA...TCTGCTTCCAGCCAGTTTGGGGCCAGCTTCTCTTACCTGCAGGACACCGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp ATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTGGGCAGCTACAAACTCAATCTCGCGCCCGAGGGTCTaGGAAGATGCGAGACGCGAA +
Preference number: 4 (lower is better)
Translates to: IRPKVSTMDLSWAATNSISRPRV*EDARRE
Trigger: TTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGA...GATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCAGGCGTAAGCCCGGGCTaGAGACGGGATGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPGVSPG*RRDGWP
Trigger: GGGCCAACCATCCCGTCTCCAGCCCGGGCTTACGCC...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR CCA 90 bp GAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCCAGGCCAGGGGCACCTaGGTTGAAATCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: ESHLHNSSPTFTAGQARGQARGT*VEIRLT
Trigger: GGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTG...GCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp CCTGGCTTTCTCTGCTCCATCTTCAAGCCCCAGGATTCCATGCAAAGTCCACGGGGAAACACAGAGCGATaGGATCCCCAAAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: PGFLCSIFKPQDSMQSPRGNTER*DPQSRT
Trigger: CGTGCGGCTTTGGGGATCCCATCGCTCTGTGTTTCC...CCGTGGACTTTGCATGGAATCCTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp CCTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCTCCTGTCCCTGCAGCTaGACTTTCGGAGTATGTATC +
Preference number: 4 (lower is better)
Translates to: PQSASGHKTLQGETSARPSCPCS*TFGVCI
Trigger: GATACATACTCCGAAAGTCCAGCTGCAGGGACAGGA...GGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp TCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCTCCTCCTCCAGGCGTaGCAGCAGCACGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SESRESHLHNSSPTFTAGLLLQA*QQHGLL
Trigger: GAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAG...GCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR TCA 90 bp CCTCAGAGTGCCAGTGGCCACAAGACACTACAGGGGGAAACCTCAGCCAGACCCAGTGTCTTCATCATTTaGATATCCACGACGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PQSASGHKTLQGETSARPSVFII*ISTTLR
Trigger: CCGGAGCGTCGTGGATATTCAAATGATGAAGACACT...GGGTCTGGCTGAGGTTTCCCCCTGTAGTGTCTTGTGGCCACTGGCACTCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR GCA 90 bp ATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTGGGCAGCTACAAACTCAATCCCTCAGCCAGCCTCATaGTTCCACCCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IRPKVSTMDLSWAATNSIPQPAS*FHPAGR
Trigger: TCTGCCTGCTGGGTGGAAGCATGAGGCTGGCTGAGG...GATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp GTTCCCACATCAGCATTAGGGCCTACCTGGGTTACAAGGCATAGGAGCAGCACAATACAAACCCCGAGATaGAGCAGACCCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPTSALGPTWVTRHRSSTIQTPR*SRPRAG
Trigger: CCCAGCCCTGGGTCTGCTGCATCTCGGGGTTTGTAT...TGTGCTGCTCCTATGCCTTGTAACCCAGGTAGGCCCTAATGCTGATGTGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp AGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCTCTCGGAGCAGAGATaGATGAAGAGGGTGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RKSLAQFISYIHCWPGQGLSEQR*MKRVPA
Trigger: CGCCGGCACCCTCTTCATCCATCTCTGCTCCGAGAG...CCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp CCAGGATTCCATGCAAAGTCCACGGTCGAGGTTCCCACATCAGCATTAGGGCCTTTGCACGCAGGTGGCTaGTTTGAGAGGTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PGFHAKSTVEVPTSALGPLHAGG*FERWLQ
Trigger: CTGAAGCCACCTCTCAAACCAGCCACCTGCGTGCAA...AGGCCCTAATGCTGATGTGGGAACCTCGACCGTGGACTTTGCATGGAATCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
3UTR CAA 72 bp AGAGGTAAGGCAGGGACTTGCACGCAGGTGGCTGGTTaGAGAGGTGGCTTCAGGAAGCTTTTCTCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RGKAGTCTQVAG*RGGFRKLFSAH
Trigger: ATGGGCTGAGAAAAGCTTCCTGAAGCCACCTCTCAAACCAGCCACCTGCGTGCAAGTCCCTGCCTTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp CAACTGCTTACTGAGTGCTTCAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCAGCTGCCCGGATCAGCTaGTCCTTGTTTCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: QLLTECFSGLALLWEMTPAARIS*SLFLWV
Trigger: AACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGC...TGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp TGTTTCCCCAGTGCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCATGCTGGTGGAGGAGCTaGTCTCCACGCCGTATCTTT +
Preference number: 4 (lower is better)
Translates to: CFPSARFLTTGSRYPNTPCWWRS*SPRRIF
Trigger: AAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCA...TGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR TCA 90 bp GACTTTGTAGAGCCTTCAGAATACTTTGTGCCCAGCAAATCTTTAGGAGGGGCCAGGTGGGCTCTGCTCTaGGTGTGGCCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: DFVEPSEYFVPSKSLGGARWALL*VWPAQP
Trigger: TGGCTGTGCAGGCCACACTCAGAGCAGAGCCCACCT...GGCCCCTCCTAAAGATTTGCTGGGCACAAAGTATTCTGAAGGCTCTACAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp GAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGCTGCCTCTATCCTGCTaGGTGTGCTCTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ESRESHLHNSSPTFTAGQLPLSC*VCSAQA
Trigger: GGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAG...CTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR GCA 90 bp AGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCACCGAGTTTTGGCAGGGATaGTGGGTCCCATTATGCTGG +
Preference number: 4 (lower is better)
Translates to: SHLHNSSPTFTAGQARGTEFWQG*WVPLCW
Trigger: CCAGCATAATGGGACCCAGCATCCCTGCCAAAACTC...GGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp CAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTGGCCCAACTGCTTACTGAGTaGTTCAGTGGCCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QAPLLQGGSNCLLSASVAQLLTE*FSGLAL
Trigger: CAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTG...GGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCATCGCGCCCGAGGGTCTaGGAAGATGCGAGACGCGAA +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPSRPRV*EDARRE
Trigger: TTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGA...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR CCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCAGCCCTCAACCTCCCTTaGACGCCGCCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPALNLP*TPPSSA
Trigger: TGCGGAAGATGGCGGCGTCCAAGGGAGGTTGAGGGC...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR CCA 90 bp TTTCTCTGCTCCATCTTCAAGCCCCAGGATTCCATGCAAAGTCCACGGTCGAGGAAGCTGGCCCCAAACTaGCTGGAAGCAGAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: FLCSIFKPQDSMQSPRSRKLAPN*LEAEVR
Trigger: CCTTACCTCTGCTTCCAGCCAGTTTGGGGCCAGCTT...CCTCGACCGTGGACTTTGCATGGAATCCTGGGGCTTGAAGATGGAGCAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp CCTGGCTTTCTCTGCTCCATCTTCAAGCCCCAGGATTCCATGCAAAGTCCACGGGCATTAGGGCCTACCTaGGTTACAAGGCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGFLCSIFKPQDSMQSPRALGPT*VTRHRS
Trigger: GCTCCTATGCCTTGTAACCCAGGTAGGCCCTAATGC...CCGTGGACTTTGCATGGAATCCTGGGGCTTGAAGATGGAGCAGAGAAAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp GAAGCCGGTGTCCTGCAGGTAAGAGAAGCTGGCCCCAAACTGGCTGGAAGCAGATCCCACTCATTCCTTTaGAGTTCCACTAATGTCTCG +
Preference number: 4 (lower is better)
Translates to: EAGVLQVREAGPKLAGSRSHSFL*SSTNVS
Trigger: CGAGACATTAGTGGAACTTCAAAGGAATGAGTGGGA...TCTGCTTCCAGCCAGTTTGGGGCCAGCTTCTCTTACCTGCAGGACACCGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp GTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCGGGTTGAAATCAGGCTaGCCTCCGGACAGCCGTACT +
Preference number: 4 (lower is better)
Translates to: VERKSLAQFISYIHCWPGGLKSG*PPDSRT
Trigger: AGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCC...GCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR GCA 90 bp TCACAGATGAATTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTCCCTGGGCAGCCATCTaGCTTCACCCTGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SQMNSQMNRQSALIQRWAPWAAI*LHPGGN
Trigger: GTTTCCTCCAGGGTGAAGGCAGATGGCTGCCCAGGG...AGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAATTCATCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp GGGAATCTCAGGGTGACGCTGAGGCCGAGTCCCCAAAAGCCAAGGAAGCCAGCCCGAGAGAAAGTCACTTaGACAATTCATCTCCTACAT +
Preference number: 4 (lower is better)
Translates to: GNLRVTLRPSPQKPRKPAREKVT*TIHLLH
Trigger: ATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCG...GGCTGGCTTCCTTGGCTTTTGGGGACTCGGCCTCAGCGTCACCCTGAGATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp CAGGGGACTTCCAAATGCTCCTTCTCTGTTCAGCTCCCTTTGTGTTCACGGTATTGGAGACGGGATGGTTaGCCCCGGACTCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: QGTSKCSFSVQLPLCSRYWRRDG*PRTHRS
Trigger: GCTTCTATGAGTCCGGGGCCAACCATCCCGTCTCCA...ATACCGTGAACACAAAGGGAGCTGAACAGAGAAGGAGCATTTGGAAGTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp AGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGGCACCTCCCGAGTTTTaGCAGGGATGCTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SREKVTCTIHLLHSLLARAPPEF*QGCWVP
Trigger: TGGGACCCAGCATCCCTGCCAAAACTCGGGAGGTGC...CCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp CGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGCGAGACGCGAAACCTaGAGCAGGAAACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: REKVTCTIHLLHSLLARPARRET*SRKHRA
Trigger: CGCTCTGTGTTTCCTGCTCCAGGTTTCGCGTCTCGC...TGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp TCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCAGGCCGGGGGAGCTGTaGCTGCACTGCCTCTATCCT +
Preference number: 4 (lower is better)
Translates to: SESRESHLHNSSPTFTAGRPGEL*LHCLYP
Trigger: AGGATAGAGGCAGTGCAGCCACAGCTCCCCCGGCCT...GCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
3UTR CAA 72 bp CGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAACTCAATCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RRSIRPKVSTMD*SWAATNSIPFL
Trigger: GAGAAAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp TTTCTCTGCTCCATCTTCAAGCCCCAGGATTCCATGCAAAGTCCACGGTCGAGGTCTCAGCCCATTCGATaGTTGGATCCCACTCATTCC +
Preference number: 4 (lower is better)
Translates to: FLCSIFKPQDSMQSPRSRSQPIR*LDPTHS
Trigger: GGAATGAGTGGGATCCAATCATCGAATGGGCTGAGA...CCTCGACCGTGGACTTTGCATGGAATCCTGGGGCTTGAAGATGGAGCAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp TTGTTTCCCCAGTGCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACT +
Preference number: 4 (lower is better)
Translates to: LFPQCKVPDHRQQISKHALAPWT*AGQLQT
Trigger: AGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAA...GGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGGGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR TCA 90 bp TCACAGATGAATTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTATCGGCAGAGTGCGCTaGTACAAAGGTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SQMNSQMNRQSALIQRWAIGRVR*YKGGLC
Trigger: GCAGAGCCCACCTTTGTATCAGCGCACTCTGCCGAT...AGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAATTCATCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp CAGGGGACTTCCAAATGCTCCTTCTCTGTTCAGCTCCCTTTGTGTTCACGGTATTGGGGTGAACACCCATaGGTTTGTAGGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QGTSKCSFSVQLPLCSRYWGEHP*VCRACC
Trigger: ACAGCAGGCCCTACAAACTCATGGGTGTTCACCCCA...ATACCGTGAACACAAAGGGAGCTGAACAGAGAAGGAGCATTTGGAAGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp AGAGACAACTGTGGGGTGAACACCCATGAGTTTGTAGGGCCTGCTGTCTTCAGAGAAGCAACTGCTTACTaGGTGCTTCAGTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RDNCGVNTHEFVGPAVFREATAY*VLQWPC
Trigger: GCAAGGCCACTGAAGCACTCAGTAAGCAGTTGCTTC...TCTGAAGACAGCAGGCCCTACAAACTCATGGGTGTTCACCCCACAGTTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp AAAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCCGGAGCAGAGATGGATaGAGAGGGTGCCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KIRVERKSLAQFISYIHCRSRDG*RGCRRR
Trigger: CCGCCGCCGGCACCCTCTTCATCCATCTCTGCTCCG...GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR GCA 90 bp AAAGCCTTCAGGCTGAGGCTGAAGAACACAAATAGAGTTGTCTGTGGATTACATGACAGCAGCACGGCCTaGTCCACTGTCAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KAFRLRLKNTNRVVCGLHDSSTA*STVRRR
Trigger: CCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTC...ATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp AGAGACAACTGTGGGGTGAACACCCATGAGTTTGTAGGGCCTGCTGTCTTCAGAGATGAATCGGCAGAGTaGGCTGATACAAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RDNCGVNTHEFVGPAVFRDESAE*ADTKVG
Trigger: GCCCACCTTTGTATCAGCGCACTCTGCCGATTCATC...TCTGAAGACAGCAGGCCCTACAAACTCATGGGTGTTCACCCCACAGTTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp TTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTGCTTCCAGCGGGGACTaGAAAGTAACACCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LPSASASRWKQLLTECFSASSGD*KVTPWL
Trigger: CAACCAGGGTGTTACTTTGCAGTCCCCGCTGGAAGC...ACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp CACTCCACTTGCAAATCCTCCCTGCAATACAGAGCATTCAGGTGCTCTGCCTTAGTGCTTCAGTGGCCTTaGCCTGCTCTGGGAAATGAC +
Preference number: 4 (lower is better)
Translates to: HSTCKSSLQYRAFRCSALVLQWP*PALGND
Trigger: GTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCAC...TAAGGCAGAGCACCTGAATGCTCTGTATTGCAGGGAGGATTTGCAAGTGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp GACAGGGTGAGTCAATCCCAAGCCATCCTAGCAGGCTGGATGAACTTTTCTAGCTACAGAGCATTCAGGTaGTCTGCCTTACCAAGCGCC +
Preference number: 4 (lower is better)
Translates to: DRVSQSQAILAGWMNFSSYRAFR*SALPSA
Trigger: GGCGCTTGGTAAGGCAGAGCACCTGAATGCTCTGTA...GCTAGAAAAGTTCATCCAGCCTGCTAGGATGGCTTGGGATTGACTCACCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp GTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCGAGCTGTGGCTGCACTaGCTCTATCCTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: VERKSLAQFISYIHCWPGELWLH*LYPAEC
Trigger: ACACTCAGCAGGATAGAGGCAGTGCAGCCACAGCTC...GCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR GCA 90 bp GAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGATCTCCTACATTCACTaGTGGCCAGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ESRESHLHNSSPTFTAGQISYIH*WPGQGH
Trigger: GTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGAT...CTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp TCACAGATGAATTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTGCGAGACGCGAAACCTaGAGCAGGAAACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: SQMNSQMNRQSALIQRWAARRET*SRKHRA
Trigger: CGCTCTGTGTTTCCTGCTCCAGGTTTCGCGTCTCGC...AGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAATTCATCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCAGCGAGACGCGAAACCTaGAGCAGGAAACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPARRET*SRKHRA
Trigger: CGCTCTGTGTTTCCTGCTCCAGGTTTCGCGTCTCGC...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR CCA 90 bp ATCCACCTCCTGAAGATTGACAATCGAGAAGATGAGCTGGTGACCAGAATCAACCCTGCCCTGTGCAGTTaGGGAAGCGGCTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: IHLLKIDNREDELVTRINPALCS*GSGCHR
Trigger: TCTGTGACAGCCGCTTCCCCAACTGCACAGGGCAGG...GTTGATTCTGGTCACCAGCTCATCTTCTCGATTGTCAATCTTCAGGAGGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp ATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTGGGCAGCTACAAACTCAATCCATCTGCCTTCACCCTaGAGGAAACATGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: IRPKVSTMDLSWAATNSIHLPSP*RKHASS
Trigger: GCTGGAAGCATGTTTCCTCCAGGGTGAAGGCAGATG...GATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp CAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCATTTCAACCATCCCAGGCAACGGGCCTAGGATGTGCTaGCTTTCCCAAATGTATTTG +
Preference number: 4 (lower is better)
Translates to: QWPCPALGNDSISTIPGNGPRMC*LSQMYL
Trigger: CAAATACATTTGGGAAAGCCAGCACATCCTAGGCCC...GTTGCCTGGGATGGTTGAAATGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp ATGGAGAAGTGCAGAGGCATACGTGAAAACAGGGCTCAGCACATTTCCAGGGTGATGTTGCCCCACTTCTaGATCTGGTACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MEKCRGIRENRAQHISRVMLPHF*IWYSSS
Trigger: GGAGGAGGAGTACCAGATCCAGAAGTGGGGCAACAT...CACCCTGGAAATGTGCTGAGCCCTGTTTTCACGTATGCCTCTGCACTTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp TCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCTCTCGGAGCAGAGATaGATGAAGAGGGTGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SESRESHLHNSSPTFTAGLSEQR*MKRVPA
Trigger: CGCCGGCACCCTCTTCATCCATCTCTGCTCCGAGAG...GCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp TATCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTAGACAAAGCCCTCAACCTCCCTTaGACGCCGCCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: YPNTPWEISCLTLWNLDKALNLP*TPPSSA
Trigger: TGCGGAAGATGGCGGCGTCCAAGGGAGGTTGAGGGC...TTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCAGGAAACACAGAGCGATaGGATCCCCAAAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPGNTER*DPQSRT
Trigger: CGTGCGGCTTTGGGGATCCCATCGCTCTGTGTTTCC...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR TCA 90 bp GTTCCCACATCAGCATTAGGGCCTACCTGGGTTACAAGGCATAGGAGCAGCACAGGTTGGGTTGTCCAATaGTGTGTTGCACAATGTGGT +
Preference number: 4 (lower is better)
Translates to: VPTSALGPTWVTRHRSSTGWVVQ*CVAQCG
Trigger: ACCACATTGTGCAACACATCATTGGACAACCCAACC...TGTGCTGCTCCTATGCCTTGTAACCCAGGTAGGCCCTAATGCTGATGTGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR TCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCAGCTGCCCGGATCAGCTaGTCCTTGTTTCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPAARIS*SLFLWV
Trigger: AACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGC...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR TCA 90 bp CCTCATGCTTCCACCCAGCAGGCAGAGGTTTTGGGCAAGTTAGACTTGAGAGTATCTCAGCCCATTCGATaGTTGGATCCCACTCATTCC +
Preference number: 4 (lower is better)
Translates to: PHASTQQAEVLGKLDLRVSQPIR*LDPTHS
Trigger: GGAATGAGTGGGATCCAATCATCGAATGGGCTGAGA...TACTCTCAAGTCTAACTTGCCCAAAACCTCTGCCTGCTGGGTGGAAGCATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp AAAGCCTTCAGGCTGAGGCTGAAGAACACAAATAGAGTTGTCTGTGGATTACATCAGGGGCACCTGGGTTaGAATCAGGCTGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: KAFRLRLKNTNRVVCGLHQGHLG*NQADLR
Trigger: CCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTG...ATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp CGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCACCATGTGTTGTAAGATaGCAGGTGGCTGACGAGCAC +
Preference number: 4 (lower is better)
Translates to: REKVTCTIHLLHSLLARPPCVVR*QVADEH
Trigger: GTGCTCGTCAGCCACCTGGCATCTTACAACACATGG...TGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp GACTTTGTAGAGCCTTCAGAATACTTTGTGCCCAGCAAATCTTTAGGAGGGGCCTACAAAGGTGGGCTCTaGTCTGAGTGTGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: DFVEPSEYFVPSKSLGGAYKGGL*SECGLH
Trigger: GTGCAGGCCACACTCAGAGCAGAGCCCACCTTTGTA...GGCCCCTCCTAAAGATTTGCTGGGCACAAAGTATTCTGAAGGCTCTACAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp TCACAGATGAATTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTTTTCCCCACAACACCTaGCCTGTGCAGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SQMNSQMNRQSALIQRWAFPHNT*PVQLGK
Trigger: CTTCCCCAACTGCACAGGGCAGGTGTTGTGGGGAAA...AGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAATTCATCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp AGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGGGGCCCACTCAATGTTaGCCCACTTCTGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: RKSLAQFISYIHCWPGQGGPTQC*PTSGSF
Trigger: AAAAGATCCAGAAGTGGGGCAACATTGAGTGGGCCC...CCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000581698.1
CDS-3UTR CCA 90 bp AATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGTCGCGCCCGAGGGTCTaGGAAGATGCGAGACGCGAA +
Preference number: 4 (lower is better)
Translates to: NQSREKVTCTIHLLHSLLSRPRV*EDARRE
Trigger: TTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGA...CAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp AGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCACCAGCCCATTCGATGATTaGATCCCACTCATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SHLHNSSPTFTAGQARGTSPFDD*IPLIPL
Trigger: CAAAGGAATGAGTGGGATCCAATCATCGAATGGGCT...GGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp TTCCATGCAAAGTCCACGGTCGAGGTTCCCACATCAGCATTAGGGCCTACCTGGAGCCCATTCGATGATTaGATCCCACTCATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FHAKSTVEVPTSALGPTWSPFDD*IPLIPL
Trigger: CAAAGGAATGAGTGGGATCCAATCATCGAATGGGCT...CCAGGTAGGCCCTAATGCTGATGTGGGAACCTCGACCGTGGACTTTGCATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CCA 90 bp TTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTCTGCTCTGAGTGGCCTTGCCCTGCTCTaGGAAATGACTCCATTTCAA +
Preference number: 4 (lower is better)
Translates to: FTDESAECADTKVGSALSGLALL*EMTPFQ
Trigger: TTGAAATGGAGTCATTTCCCAGAGCAGGGCAAGGCC...ACTCAGAGCAGAGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp GACAGGGTGAGTCAATCCCAAGCCATCCTAGCAGGCTGGATGAACTTTTCTAGCGCCTCTGCTTCAAGGTaGAAGCAACTGCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: DRVSQSQAILAGWMNFSSASASR*KQLLTE
Trigger: CTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGC...GCTAGAAAAGTTCATCCAGCCTGCTAGGATGGCTTGGGATTGACTCACCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp TATCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTAGACAAACAGGCCAGGGGCACCTaGGTTGAAATCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: YPNTPWEISCLTLWNLDKQARGT*VEIRLT
Trigger: GGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTG...TTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp AGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCACCATGTTGCCCCACTTCTaGATCTTTTCTCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: SHLHNSSPTFTAGQARGTMLPHF*IFSQPI
Trigger: AATGGGCTGAGAAAAGATCCAGAAGTGGGGCAACAT...GGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581698.1
CDS-3UTR TCA 90 bp GTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCTCTCAGCCCATTCGATaGTTGGATCCCACTCATTCC +
Preference number: 4 (lower is better)
Translates to: VERKSLAQFISYIHCWPGSQPIR*LDPTHS
Trigger: GGAATGAGTGGGATCCAATCATCGAATGGGCTGAGA...GCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR TCA 90 bp CAGGGGACTTCCAAATGCTCCTTCTCTGTTCAGCTCCCTTTGTGTTCACGGTATGAGAGAGAAGCATTGTaGGAACAGATGTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QGTSKCSFSVQLPLCSRYEREAL*EQMSWV
Trigger: CACCCAGGACATCTGTTCTCACAATGCTTCTCTCTC...ATACCGTGAACACAAAGGGAGCTGAACAGAGAAGGAGCATTTGGAAGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp AAAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCCAGGGGCACCTGGGTTaGAATCAGGCTGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: KIRVERKSLAQFISYIHCQGHLG*NQADLR
Trigger: CCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTG...GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR TCA 90 bp CTGTTTAACCCTCTGGAACCTAGACAAAACAGGAAGAATGGAGAAGTGCAGAGGCCAGTGCAAGGTTCCTaGCCACAGGCAGCAGATATC +
Preference number: 4 (lower is better)
Translates to: LFNPLEPRQNRKNGEVQRPVQGS*PQAADI
Trigger: GATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGG...CCTCTGCACTTCTCCATTCTTCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp AGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCAGAAACTTCACGGCTaGCCGGATCAGCTGATCCTT +
Preference number: 4 (lower is better)
Translates to: SREKVTCTIHLLHSLLARQKLHG*PDQLIL
Trigger: AAGGATCAGCTGATCCGGGCAGCCGTGAAGTTTCTG...CCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp GTTCCCACATCAGCATTAGGGCCTACCTGGGTTACAAGGCATAGGAGCAGCACATGTCCAATGATGTGTTaGACAATGTGGTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: VPTSALGPTWVTRHRSSTCPMMC*TMWSSP
Trigger: GGGTGAAGACCACATTGTGCAACACATCATTGGACA...TGTGCTGCTCCTATGCCTTGTAACCCAGGTAGGCCCTAATGCTGATGTGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR GCA 90 bp GACAGGGTGAGTCAATCCCAAGCCATCCTAGCAGGCTGGATGAACTTTTCTAGCCAAGGTGGAAGCAACTaGTTACTGAGTGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: DRVSQSQAILAGWMNFSSQGGSN*LLSASV
Trigger: CACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTG...GCTAGAAAAGTTCATCCAGCCTGCTAGGATGGCTTGGGATTGACTCACCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp TTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTCTTACCAAGCGCCTCTaGTTCAAGGTGGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: LPSASASRWKQLLTECFSLTKRL*FKVEAT
Trigger: AGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAAG...ACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp TCTTGGTGTACACGTTTAATAGACAGGGTGAGTCAATCCCAAGCCATCCTAGCAAGCATTCAGGTGCTCTaGCTTACCAAGCGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SWCTRLIDRVSQSQAILASIQVL*LTKRLC
Trigger: GCAGAGGCGCTTGGTAAGGCAGAGCACCTGAATGCT...TGCTAGGATGGCTTGGGATTGACTCACCCTGTCTATTAAACGTGTACACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp AAAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCCGGGGGAGCTGTGGCTaGACTGCCTCTATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KIRVERKSLAQFISYIHCRGSCG*TASILL
Trigger: CAGCAGGATAGAGGCAGTGCAGCCACAGCTCCCCCG...GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR TCA 90 bp CGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGTTGGGTTGTCCAATaGTGTGTTGCACAATGTGGT +
Preference number: 4 (lower is better)
Translates to: REKVTCTIHLLHSLLARPGWVVQ*CVAQCG
Trigger: ACCACATTGTGCAACACATCATTGGACAACCCAACC...TGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR TCA 90 bp TATCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTAGACAAAGCTGCCCGGATCAGCTaGTCCTTGTTTCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: YPNTPWEISCLTLWNLDKAARIS*SLFLWV
Trigger: AACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGC...TTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR TCA 90 bp TTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTCTGCTCTGAGTTCCCACTCATTCCTTTaGAGTTCCACTAATGTCTCG +
Preference number: 4 (lower is better)
Translates to: FTDESAECADTKVGSALSSHSFL*SSTNVS
Trigger: CGAGACATTAGTGGAACTTCAAAGGAATGAGTGGGA...ACTCAGAGCAGAGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCATCTCAGCCCATTCGATaGTTGGATCCCACTCATTCC +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPSQPIR*LDPTHS
Trigger: GGAATGAGTGGGATCCAATCATCGAATGGGCTGAGA...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR TCA 90 bp TTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTACGACATCCACCTCCTaGAGATTGACAATCGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPSASASRWKQLLTECFSTTSTS*RLTIEK
Trigger: CTTCTCGATTGTCAATCTTCAGGAGGTGGATGTCGT...ACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp AATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGTCAGGAGCTTGTGCTTaGCTGTGGTGCTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: NQSREKVTCTIHLLHSLLSGACA*LWCSRS
Trigger: GCTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGA...CAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR GCA 90 bp CAGCTTTTTGTCGATAAAGATACGATTGTTAATGCTGTCGGGGCATCGCACGACCAGAAACTTCACGGCTaGCCGGATCAGCTGATCCTT +
Preference number: 4 (lower is better)
Translates to: QLFVDKDTIVNAVGASHDQKLHG*PDQLIL
Trigger: AAGGATCAGCTGATCCGGGCAGCCGTGAAGTTTCTG...GTCGTGCGATGCCCCGACAGCATTAACAATCGTATCTTTATCGACAAAAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp ATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTGGGCAGCTACAAACTCAATCCTTGCAAATCCTCCCTaGAATACAGAGCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: IRPKVSTMDLSWAATNSILANPP*NTEHSG
Trigger: ACCTGAATGCTCTGTATTGCAGGGAGGATTTGCAAG...GATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp TATCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTAGACAAAGAGCTGTGGCTGCACTaGCTCTATCCTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: YPNTPWEISCLTLWNLDKELWLH*LYPAEC
Trigger: ACACTCAGCAGGATAGAGGCAGTGCAGCCACAGCTC...TTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp CTGGTGACCAGAATCAACTCTTGGTGTACACGTTTAATAGACAGGGTGAGTCAACATGGAAATCCTCCCTaGTACTCCTCCTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LVTRINSWCTRLIDRVSQHGNPP*YSSSRR
Trigger: ACGCCTGGAGGAGGAGTACCAGGGAGGATTTCCATG...TTGACTCACCCTGTCTATTAAACGTGTACACCAAGAGTTGATTCTGGTCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp GAGAAGTGCAGAGGCATACGTGAAAACAGGGCTCAGCACATTTCCAGGGTGGAGAGCTGTTTAACCCTCTaGAACCTAGACAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: EKCRGIRENRAQHISRVESCLTL*NLDKTG
Trigger: TCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCT...CTCCACCCTGGAAATGTGCTGAGCCCTGTTTTCACGTATGCCTCTGCACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp TGTTTCCCCAGTGCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCATATCCAAACACGCCATaGGAGATAAGCTGTTTAACC +
Preference number: 4 (lower is better)
Translates to: CFPSARFLTTGSRYPNTPYPNTP*EISCLT
Trigger: GGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATA...TGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR TCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCAGGTTGGGTTGTCCAATaGTGTGTTGCACAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPGWVVQ*CVAQCG
Trigger: ACCACATTGTGCAACACATCATTGGACAACCCAACC...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR TCA 90 bp AGAACACAAATAGAGTTGTCTGTGGATTACATGATTGTTTCCCCAGTGCAAGGTAAGATGCCAGGTGGCTaGCGAGCACCTCCCGAGTTT +
Preference number: 4 (lower is better)
Translates to: RTQIELSVDYMIVSPVQGKMPGG*RAPPEF
Trigger: AAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTT...ACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR TCA 90 bp CAGCTTTTTGTCGATAAAGATACGATTGTTAATGCTGTCGGGGCATCGCACGACTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACT +
Preference number: 4 (lower is better)
Translates to: QLFVDKDTIVNAVGASHDLAPWT*AGQLQT
Trigger: AGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAA...GTCGTGCGATGCCCCGACAGCATTAACAATCGTATCTTTATCGACAAAAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp AAAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTCAGGAGCTTGTGCTTaGCTGTGGTGCTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: KIRVERKSLAQFISYIHCSGACA*LWCSRS
Trigger: GCTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGA...GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR TCA 90 bp AAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGGTTGAAATCAGGCTaGCCTCCGGACAGCCGTACT +
Preference number: 4 (lower is better)
Translates to: KSESRESHLHNSSPTFTAGLKSG*PPDSRT
Trigger: AGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCC...AGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR GCA 90 bp CATGGACTTGAGCTGGGCAGCTACAAACTCAATCCCTTTTCTCAGCCCATTCGATGTCCAATGATGTGTTaGACAATGTGGTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: HGLELGSYKLNPFSQPIRCPMMC*TMWSSP
Trigger: GGGTGAAGACCACATTGTGCAACACATCATTGGACA...TCGAATGGGCTGAGAAAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp AAAGCCTTCAGGCTGAGGCTGAAGAACACAAATAGAGTTGTCTGTGGATTACATGGGCCCACTCAATGTTaGCCCACTTCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: KAFRLRLKNTNRVVCGLHGPTQC*PTSGSG
Trigger: ACCAGATCCAGAAGTGGGGCAACATTGAGTGGGCCC...ATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp AAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTCTGCTGAGTGTGCTCTaGCCAGGCCTCACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KSESRESHLHNSSPTFTALLSVL*PGLTPS
Trigger: TGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAG...AGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp TCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTAGACAAAACTTGATGGTATCCTGCTaGGAATCCCACTCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SKHAMGDKLFNPLEPRQNLMVSC*ESHSVA
Trigger: GGCTACTGAGTGGGATTCCCAGCAGGATACCATCAA...GTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp TCACAGATGAATTCACAGATGAATCGGCAGAGTGCGCTGATACAAAGGTGGGCTACCATGGACTTGAGCTaGGCAGCTACAAACTCAATC +
Preference number: 4 (lower is better)
Translates to: SQMNSQMNRQSALIQRWATMDLS*AATNSI
Trigger: GATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGT...AGCCCACCTTTGTATCAGCGCACTCTGCCGATTCATCTGTGAATTCATCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp AAAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCCCCCACTTCTGGATCTaGTACTCCTCCTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: KIRVERKSLAQFISYIHCPHFWI*YSSSRR
Trigger: ACGCCTGGAGGAGGAGTACCAGATCCAGAAGTGGGG...GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp AGAACACAAATAGAGTTGTCTGTGGATTACATGATTGTTTCCCCAGTGCAAGGTGGAAACACAGAGCGATaGGATCCCCAAAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: RTQIELSVDYMIVSPVQGGNTER*DPQSRT
Trigger: CGTGCGGCTTTGGGGATCCCATCGCTCTGTGTTTCC...ACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR TCA 90 bp TCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTAGACAAAACGCATGGTGTAGTACTTaGTGGTATCCTGCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SKHAMGDKLFNPLEPRQNAWCST*WYPAGN
Trigger: ATTCCCAGCAGGATACCATCAAGTACTACACCATGC...GTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR TCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCATCCCACTCATTCCTTTaGAGTTCCACTAATGTCTCG +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPSHSFL*SSTNVS
Trigger: CGAGACATTAGTGGAACTTCAAAGGAATGAGTGGGA...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR GCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCATGTCCAATGATGTGTTaGACAATGTGGTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPCPMMC*TMWSSP
Trigger: GGGTGAAGACCACATTGTGCAACACATCATTGGACA...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR GCA 90 bp AAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCACGAGAGAAAGTCACTTaGACAATTCATCTCCTACAT +
Preference number: 4 (lower is better)
Translates to: KVTCTIHLLHSLLARPGAREKVT*TIHLLH
Trigger: ATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCG...TGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CCA 90 bp GTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCGTTTTCAGCTTCCTGTaGTCCAGGTTTATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VERKSLAQFISYIHCWPGVFSFL*SRFISK
Trigger: CTTTGAGATAAACCTGGACCACAGGAAGCTGAAAAC...GCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp GACTTTGTAGAGCCTTCAGAATACTTTGTGCCCAGCAAATCTTTAGGAGGGGCCAGCCCATTCGATGATTaGATCCCACTCATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DFVEPSEYFVPSKSLGGASPFDD*IPLIPL
Trigger: CAAAGGAATGAGTGGGATCCAATCATCGAATGGGCT...GGCCCCTCCTAAAGATTTGCTGGGCACAAAGTATTCTGAAGGCTCTACAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCAAGCCCATTCGATGATTaGATCCCACTCATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPSPFDD*IPLIPL
Trigger: CAAAGGAATGAGTGGGATCCAATCATCGAATGGGCT...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR CCA 90 bp CAACTGCTTACTGAGTGCTTCAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCAACCAGAATCAACTCTTaGTGTACACGTTTAATAGAC +
Preference number: 4 (lower is better)
Translates to: QLLTECFSGLALLWEMTPTRINS*CTRLID
Trigger: GTCTATTAAACGTGTACACCAAGAGTTGATTCTGGT...TGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp CTGGTGACCAGAATCAACTCTTGGTGTACACGTTTAATAGACAGGGTGAGTCAAGGTTGGGTTGTCCAATaGTGTGTTGCACAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LVTRINSWCTRLIDRVSQGWVVQ*CVAQCG
Trigger: ACCACATTGTGCAACACATCATTGGACAACCCAACC...TTGACTCACCCTGTCTATTAAACGTGTACACCAAGAGTTGATTCTGGTCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp CAGCTTTTTGTCGATAAAGATACGATTGTTAATGCTGTCGGGGCATCGCACGACATGAACTTTTCTAGCTaGCATGGAAATCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QLFVDKDTIVNAVGASHDMNFSS*HGNPPW
Trigger: CCAGGGAGGATTTCCATGTCAGCTAGAAAAGTTCAT...GTCGTGCGATGCCCCGACAGCATTAACAATCGTATCTTTATCGACAAAAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp AAAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTCCTTCAGGAGCTTGTaGTTGACTGTGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: KIRVERKSLAQFISYIHCSFRSL*LTVVLS
Trigger: CGAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGA...GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR TCA 90 bp AAAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTCTCAGCCCATTCGATaGTTGGATCCCACTCATTCC +
Preference number: 4 (lower is better)
Translates to: KIRVERKSLAQFISYIHCSQPIR*LDPTHS
Trigger: GGAATGAGTGGGATCCAATCATCGAATGGGCTGAGA...GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR TCA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCAATGAACTTTTCTAGCTaGCATGGAAATCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LADMEILPFLSPFDDWIPMNFSS*HGNPPF
Trigger: AAAGGGAGGATTTCCATGTCAGCTAGAAAAGTTCAT...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR GCA 90 bp AGCTGTTTAACCCTCTGGAACCTAGACAAAACAGGAAGAATGGAGAAGTGCAGATACTTGATGGTATCCTaGTGGGAATCCCACTCAGTA +
Preference number: 4 (lower is better)
Translates to: SCLTLWNLDKTGRMEKCRYLMVS*WESHSV
Trigger: TACTGAGTGGGATTCCCAGCAGGATACCATCAAGTA...TCTGCACTTCTCCATTCTTCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp ATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGTGTCCAATGATGTGTTaGACAATGTGGTCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: IRVERKSLAQFISYIHCWCPMMC*TMWSGA
Trigger: TGCACCTGACCACATTGTGCAACACATCATTGGACA...CCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
3UTR CAA 72 bp GGGACTTCCAAATGCTCCTTCTCTGTTCAGCTCCCTTaGTGTTCACGGTATAATGACACACACTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: GTSKCSFSVQLP*CSRYNDTHFLI
Trigger: AATGAGAAAGTGTGTGTCATTATACCGTGAACACAAAGGGAGCTGAACAGAGAAGGAGCATTTGGAAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp AAAGCCTTCAGGCTGAGGCTGAAGAACACAAATAGAGTTGTCTGTGGATTACATTGTCTGTGGATTACATaGTTGTTTCCCCAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KAFRLRLKNTNRVVCGLHCLWIT*LFPQCK
Trigger: CTTGCACTGGGGAAACAATCATGTAATCCACAGACA...ATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp AAAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCGTAAAGAGCTTGGCTTaGGGAGTTTTCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KIRVERKSLAQFISYIHCVKSLA*GVFSFL
Trigger: CAGGAAGCTGAAAACTCCCCAAGCCAAGCTCTTTAC...GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp AAAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCACCATGGACTTGAGCTaGGCAGCTACAAACTCAATC +
Preference number: 4 (lower is better)
Translates to: KIRVERKSLAQFISYIHCTMDLS*AATNSI
Trigger: GATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGT...GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp CACTCCACTTGCAAATCCTCCCTGCAATACAGAGCATTCAGGTGCTCTGCCTTAGAAGGATACTCCAAATaGAATCCAAAGTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HSTCKSSLQYRAFRCSALEGYSK*NPKFGF
Trigger: AAAACCAAACTTTGGATTCCATTTGGAGTATCCTTC...TAAGGCAGAGCACCTGAATGCTCTGTATTGCAGGGAGGATTTGCAAGTGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CCA 90 bp CACTCCACTTGCAAATCCTCCCTGCAATACAGAGCATTCAGGTGCTCTGCCTTAAGGCCTATTAGAAGGTaGTTGTTTCTAACAACTTTT +
Preference number: 4 (lower is better)
Translates to: HSTCKSSLQYRAFRCSALRPIRR*LFLTTF
Trigger: AAAAGTTGTTAGAAACAACCACCTTCTAATAGGCCT...TAAGGCAGAGCACCTGAATGCTCTGTATTGCAGGGAGGATTTGCAAGTGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp AAATCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTTCCCACTCATTCCTTTaGAGTTCCACTAATGTCTCG +
Preference number: 4 (lower is better)
Translates to: KSESRESHLHNSSPTFTASHSFL*SSTNVS
Trigger: CGAGACATTAGTGGAACTTCAAAGGAATGAGTGGGA...AGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR GCA 90 bp AGAACACAAATAGAGTTGTCTGTGGATTACATGATTGTTTCCCCAGTGCAAGGTGGAAGAATGGAGAAGTaGAGAGGCATACGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: RTQIELSVDYMIVSPVQGGRMEK*RGIREN
Trigger: GTTTTCACGTATGCCTCTGCACTTCTCCATTCTTCC...ACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CCA 90 bp AAGGTGGTTGTTTCTAACAACTTTTTACAAGACAGCAAAGTCAGGAACAAGAGATGCAAAGTAACACCCTaGTTGGCCCTTTCCCCACAA +
Preference number: 4 (lower is better)
Translates to: KVVVSNNFLQDSKVRNKRCKVTP*LALSPQ
Trigger: TTGTGGGGAAAGGGCCAACCAGGGTGTTACTTTGCA...TCTCTTGTTCCTGACTTTGCTGTCTTGTAAAAAGTTGTTAGAAACAACCACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR GCA 90 bp AAGGTGGTTGTTTCTAACAACTTTTTACAAGACAGCAAAGTCAGGAACAAGAGAAATGCACACTCCACTTaGAAATCCTCCCTGCAATAC +
Preference number: 4 (lower is better)
Translates to: KVVVSNNFLQDSKVRNKRNAHST*KSSLQY
Trigger: GTATTGCAGGGAGGATTTGCAAGTGGAGTGTGCATT...TCTCTTGTTCCTGACTTTGCTGTCTTGTAAAAAGTTGTTAGAAACAACCACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462733.5
3UTR CAA 72 bp CACTTTCTCATTGGATTCTTTTCACTCACCAGCTTTTaGTCGATAAAGATACGATTGTTAATGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: HFLIGFFSLTSF*SIKIRLLMLSG
Trigger: CCCCGACAGCATTAACAATCGTATCTTTATCGACAAAAAGCTGGTGAGTGAAAAGAATCCAATGAGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR TCA 90 bp AAGGTGGTTGTTTCTAACAACTTTTTACAAGACAGCAAAGTCAGGAACAAGAGAAGACTTGAGAGTAATTaGGAGAGAAGCATTGTGAGA +
Preference number: 4 (lower is better)
Translates to: KVVVSNNFLQDSKVRNKRRLESN*ERSIVR
Trigger: TCTCACAATGCTTCTCTCTCAATTACTCTCAAGTCT...TCTCTTGTTCCTGACTTTGCTGTCTTGTAAAAAGTTGTTAGAAACAACCACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS CCA 90 bp CGTCCCGCAGCCGGAGGCAGCTCCTCCACATCGCGCCCGAGGGTCTaGGAAGATGCGAGACGCGAAACGGCGCGCCGTCGCCGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: RPAAGGSSSTSRPRV*EDARRETARRRRRA
Trigger: CGCGCGGCGGCGACGGCGCGCCGTTTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGATGTGGAGGAGCTGCCTCCGGCTGCGGGACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444058.1
CDS CCA 90 bp CGTCCCGCAGCCGGAGGCAGCTCCTCCACATCGCGCCCGAGGGTCTaGGAAGATGCGAGACGCGAAACCTGGAGCAGGAAACACAGAGCG +
Preference number: 5 (lower is better)
Translates to: RPAAGGSSSTSRPRV*EDARRETWSRKHRA
Trigger: CGCTCTGTGTTTCCTGCTCCAGGTTTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGATGTGGAGGAGCTGCCTCCGGCTGCGGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462733.5
ENST00000474627.8
ENST00000497871.1
ENST00000577586.5
ENST00000584205.5
ENST00000585101.5
CDS TCA 90 bp GCCCTGAAGGCCGGGGGAGCTGTGGCTGCACTGCCTCTATCCTGCTaGGTGTGCTCTGCCCAGGCCTCACTCCTTCAGGAGCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: ALKAGGAVAALPLSC*VCSAQASLLQELVL
Trigger: AAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAGTGCAGCCACAGCTCCCCCGGCCTTCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000467560.5
ENST00000474627.8
ENST00000496852.5
ENST00000581698.1
CDS-3UTR CAA 90 bp AACTCGATGGAGCCGAGGGTGATGGACGATGACATGCTCAAGCTGGCCGTCGGGAGCCCTCAACCTCCCTaGGACGCCGCCATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: NSMEPRVMDDDMLKLAVGSPQPP*DAAIFR
Trigger: GCGGAAGATGGCGGCGTCCAAGGGAGGTTGAGGGCT...CCCGACGGCCAGCTTGAGCATGTCATCGTCCATCACCCTCGGCTCCATCGAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS CCA 90 bp TCCACATCGCGCCCGAGGGTCTGGGAAGATGCGAGACGCGAAACCTaGAGCAGGAAACACAGAGCGATGGGATCCCCAAAGCCGCACGGT +
Preference number: 5 (lower is better)
Translates to: STSRPRVWEDARRET*SRKHRAMGSPKPHG
Trigger: ACCGTGCGGCTTTGGGGATCCCATCGCTCTGTGTTTCCTGCTCCAGGTTTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGATGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474627.8
ENST00000497871.1
ENST00000577586.5
ENST00000584205.5
ENST00000585101.5
CDS-3UTR CAA 90 bp ACGGCCTGCTCCACTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGACCTGCCCTGTGCAGTaGGGGAAGCGGCTGTCACAG +
Preference number: 5 (lower is better)
Translates to: TACSTVRRRSIRPKVSTMTCPVQ*GKRLSQ
Trigger: CTGTGACAGCCGCTTCCCCAACTGCACAGGGCAGGT...CATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS GCA 90 bp TTCTGGATCTGGTACTCCTCCTCCAGGCGTGACAGCAGCACGGCCTaGTCCACTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACC +
Preference number: 5 (lower is better)
Translates to: FWIWYSSSRRDSSTA*STVRRRSIRPKVST
Trigger: GGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467560.5
ENST00000469327.5
ENST00000474627.8
ENST00000496852.5
CDS CCA 90 bp GGGAAGATGCGAGACGCGAAACCTGGAGCAGGAAACACAGAGCGATaGGATCCCCAAAGCCGCACGGTCGGGCTGTACGGAAACCTCTCA +
Preference number: 5 (lower is better)
Translates to: GKMRDAKPGAGNTER*DPQSRTVGLYGNLS
Trigger: TGAGAGGTTTCCGTACAGCCCGACCGTGCGGCTTTGGGGATCCCATCGCTCTGTGTTTCCTGCTCCAGGTTTCGCGTCTCGCATCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474627.8
ENST00000497871.1
ENST00000577586.5
ENST00000584205.5
ENST00000585101.5
CDS GCA 90 bp TTTGATTTCTGGTACTCCTCCTCCAGGCGTGACAGCAGCACGGCCTaGTCCACTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACC +
Preference number: 5 (lower is better)
Translates to: FDFWYSSSRRDSSTA*STVRRRSIRPKVST
Trigger: GGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGAAATCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465337.2
ENST00000488753.1
CDS GCA 90 bp CCTGCTGAGTGTGCTCTGCCCAGGCCTCACTCCTTCAGGAGCTTGTaGTTGACTGTGGTGCTCTCGGAGCAGAGATGGATGAAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: PAECALPRPHSFRSL*LTVVLSEQRWMKRV
Trigger: CACCCTCTTCATCCATCTCTGCTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467560.5
ENST00000474627.8
ENST00000496852.5
ENST00000581698.1
CDS GCA 90 bp GCAACCCTGGGTCCACACCCGCTTGACCCAGATGCTGAATGGGAATaGTGTGCCAGATGCTCAGTCTTTGCATCTCTACCCTCACCCCCT +
Preference number: 5 (lower is better)
Translates to: ATLGPHPLDPDAEWE*CARCSVFASLPSPP
Trigger: AGGGGGTGAGGGTAGAGATGCAAAGACTGAGCATCTGGCACAGCATTCCCATTCAGCATCTGGGTCAAGCGGGTGTGGACCCAGGGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS TCA 90 bp GGAGTGAGTGGTGCAAAGAGCCATCCAGCGATTGTCCCACTCTTCTaGAAGAGCACTCTGGTCTTCCCTGGGGGTGATCCTCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: GVSGAKSHPAIVPLF*KSTLVFPGGDPPLL
Trigger: GAGCAGAGGAGGATCACCCCCAGGGAAGACCAGAGTGCTCTTTCAGAAGAGTGGGACAATCGCTGGATGGCTCTTTGCACCACTCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS TCA 90 bp CTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACTCAATCCCTGCAGGGACACAAGCCA +
Preference number: 5 (lower is better)
Translates to: LSGAGQSGPRLAPWT*AGQLQTQSLQGHKP
Trigger: TGGCTTGTGTCCCTGCAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465337.2
ENST00000467560.5
CDS TCA 90 bp CTCCCTCACCTTCCTCTCACCCTAGTAGGGCACAGGGAGGAGCTCTaGCATTGGATCTTCCAGCTACCTTTCCTGGTGACCCAACTGTCC +
Preference number: 5 (lower is better)
Translates to: LPHLPLTLVGHREEL*HWIFQLPFLVTQLS
Trigger: GGACAGTTGGGTCACCAGGAAAGGTAGCTGGAAGATCCAATGTCAGAGCTCCTCCCTGTGCCCTACTAGGGTGAGAGGAAGGTGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS GCA 90 bp GTAGTACTTGATGGTATCCTGCTGGGAATCCCACTCAGTAGCCACTaGAATGGCCAGGGCCTCGCTGGGGACGGTAAAGAGCTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: VVLDGILLGIPLSSH*NGQGLAGDGKELGL
Trigger: CAAGCCAAGCTCTTTACCGTCCCCAGCGAGGCCCTGGCCATTGCAGTGGCTACTGAGTGGGATTCCCAGCAGGATACCATCAAGTACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444058.1
ENST00000474627.8
ENST00000497871.1
ENST00000577586.5
CDS-3UTR CAA 90 bp GTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCAGCCCTCAACCTCCCTaGGACGCCGCCATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: VERKSLAQFISYIHCWPGSPQPP*DAAIFR
Trigger: GCGGAAGATGGCGGCGTCCAAGGGAGGTTGAGGGCT...GCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CAA 90 bp TTCCATGCAAAGTCCACGGTCGAGGTTCCCACATCAGCATTAGGGCCTACCTGGACGCAGGTGGCTGGTTaGAGAGGTGGCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: FHAKSTVEVPTSALGPTWTQVAG*RGGFRK
Trigger: CTTCCTGAAGCCACCTCTCAAACCAGCCACCTGCGT...CCAGGTAGGCCCTAATGCTGATGTGGGAACCTCGACCGTGGACTTTGCATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS TCA 90 bp CAAGTCAGAACCCAAAACAGGGCAGCTGCCACAACCTACCCCTTGTaGGTCCCAGCAGCCCTAGCAGAGAACAGGAGTGAGTGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: QVRTQNRAAATTYPL*VPAALAENRSEWCK
Trigger: TTTGCACCACTCACTCCTGTTCTCTGCTAGGGCTGCTGGGACTCACAAGGGGTAGGTTGTGGCAGCTGCCCTGTTTTGGGTTCTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS CCA 90 bp AGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTaGGCAGCTACAAACTCAATCCCTGCAGGGACACAAGCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: RRRSIRPKVSTMDLS*AATNSIPAGTQAKS
Trigger: TGACTTGGCTTGTGTCCCTGCAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465337.2
ENST00000467560.5
CDS-3UTR CAA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCAAGCCCTCAACCTCCCTaGGACGCCGCCATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: LADMEILPFLSPFDDWIPSPQPP*DAAIFR
Trigger: GCGGAAGATGGCGGCGTCCAAGGGAGGTTGAGGGCT...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS TCA 90 bp TCACAGGACCTTGTAAAGCCCATGTGTTGTAAGATGCCAGGTGGCTaGCGAGCACCTCCCGAGTTTTGGCAGGGATGCTGGGTCCCATTA +
Preference number: 5 (lower is better)
Translates to: SQDLVKPMCCKMPGG*RAPPEFWQGCWVPL
Trigger: TAATGGGACCCAGCATCCCTGCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGTCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469327.5
CDS TCA 90 bp CTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACTCAATCCCTAGTGAGACACATGACC +
Preference number: 5 (lower is better)
Translates to: LSGAGQSGPRLAPWT*AGQLQTQSLVRHMT
Trigger: GGTCATGTGTCTCACTAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469327.5
CDS TCA 90 bp AACCTACCCCTTGTGAGTCCCAGCAGCCCTAGCAGAGAACAGGAGTaGGTGGTGCAAAGAGCCATCCAGCGATTGTCCCACTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: NLPLVSPSSPSREQE*VVQRAIQRLSHSSE
Trigger: TTCAGAAGAGTGGGACAATCGCTGGATGGCTCTTTGCACCACTCACTCCTGTTCTCTGCTAGGGCTGCTGGGACTCACAAGGGGTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS CCA 90 bp AGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTaGGCAGCTACAAACTCAATCCCTAGTGAGACACATGACCCGAAC +
Preference number: 5 (lower is better)
Translates to: RRRSIRPKVSTMDLS*AATNSIPSETHDPN
Trigger: GTTCGGGTCATGTGTCTCACTAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469327.5
CDS CCA 90 bp CTAACTGCAACCCTGGGTCCACACCCGCTTGACCCAGATGCTGAATaGGAATGCTGTGCCAGATGCTCAGTCTTTGCATCTCTACCCTCA +
Preference number: 5 (lower is better)
Translates to: LTATLGPHPLDPDAE*ECCARCSVFASLPS
Trigger: TGAGGGTAGAGATGCAAAGACTGAGCATCTGGCACAGCATTCCCATTCAGCATCTGGGTCAAGCGGGTGTGGACCCAGGGTTGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS-3UTR CAA 90 bp CCGTGCAACTCGATGGAGCCGAGGGTGATGGACGATGACATGCTCAAGCTGGCCTTGTCCAATGATGTGTaGCACAATGTGGTCTTCACC +
Preference number: 5 (lower is better)
Translates to: PCNSMEPRVMDDDMLKLALSNDV*HNVVFT
Trigger: GGTGAAGACCACATTGTGCAACACATCATTGGACAA...GGCCAGCTTGAGCATGTCATCGTCCATCACCCTCGGCTCCATCGAGTTGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS-3UTR CAA 90 bp GCAAGGTTCCTGACCACAGGCAGCAGATATCCAAACACGCCATGGGAGATAAGCCACTCCTTCAGGAGCTaGTGCTTGACTGTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: ARFLTTGSRYPNTPWEISHSFRS*CLTVVL
Trigger: GAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTG...GCTTATCTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CAA 90 bp GAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCCACTCCTTCAGGAGCTaGTGCTTGACTGTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: ESHLHNSSPTFTAGQARGHSFRS*CLTVVL
Trigger: GAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTG...GCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS TCA 90 bp ACTCAATCCCTTGTAAAGCCCATGTGTTGTAAGATGCCAGGTGGCTaGCGAGCACCTCCCGAGTTTTGGCAGGGATGCTGGGTCCCATTA +
Preference number: 5 (lower is better)
Translates to: TQSLVKPMCCKMPGG*RAPPEFWQGCWVPL
Trigger: TAATGGGACCCAGCATCCCTGCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474627.8
ENST00000488753.1
ENST00000496852.5
CDS TCA 90 bp CTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACTCAATCCCTTGTAAAGCCCATGTGT +
Preference number: 5 (lower is better)
Translates to: LSGAGQSGPRLAPWT*AGQLQTQSLVKPMC
Trigger: ACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474627.8
ENST00000488753.1
ENST00000496852.5
CDS TCA 90 bp ACCCTACGAAGCCCTGGGTGGGTCTCAGGGTCCAGGTTCACACTGTaGACTTGTTACCAGGTGCATGGTGTAGTACTTGATGGTATCCTG +
Preference number: 5 (lower is better)
Translates to: TLRSPGWVSGSRFTL*TCYQVHGVVLDGIL
Trigger: CAGGATACCATCAAGTACTACACCATGCACCTGGTAACAAGTTCACAGTGTGAACCTGGACCCTGAGACCCACCCAGGGCTTCGTAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497871.1
CDS CCA 90 bp CAAAGAGCCATCCAGCGATTGTCCCACTCTTCTGAAAGAGCACTCTaGTCTTCCCTGGGGGTGATCCTCCTCTGCTCTTACCTAGTGAGA +
Preference number: 5 (lower is better)
Translates to: QRAIQRLSHSSERAL*SSLGVILLCSYLVR
Trigger: TCTCACTAGGTAAGAGCAGAGGAGGATCACCCCCAGGGAAGACCAGAGTGCTCTTTCAGAAGAGTGGGACAATCGCTGGATGGCTCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS-3UTR CAA 90 bp TCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCAGCACCTCCCGAGTTTaGGCAGGGATGCTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: SESRESHLHNSSPTFTAGSTSRV*AGMLGP
Trigger: GGGACCCAGCATCCCTGCCAAAACTCGGGAGGTGCT...GCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CAA 90 bp AGCATTCAGGTGCTCTGCCTTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTAAAGTAACACCCTGGTaGGCCCTTTCCCCACAACAC +
Preference number: 5 (lower is better)
Translates to: SIQVLCLTKRLCFKVEATKVTPW*ALSPQH
Trigger: GTGTTGTGGGGAAAGGGCCAACCAGGGTGTTACTTT...AGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAAGGCAGAGCACCTGAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CAA 90 bp AAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCCAGGGGCATTCAGGAGCTTGTGCTaGACTGTGGTGCTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: KVTCTIHLLHSLLARPGAFRSLC*TVVLSE
Trigger: CTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGAA...TGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS TCA 90 bp ATTTGTTTGACCAAGAGACACAGACATGAGCCAGTTGAGAGGAGCTaGGCTGCAGGGCCTCATGGGATGGGAATCCAAGTGGGCACTATG +
Preference number: 5 (lower is better)
Translates to: ICLTKRHRHEPVERS*AAGPHGMGIQVGTM
Trigger: CATAGTGCCCACTTGGATTCCCATCCCATGAGGCCCTGCAGCTCAGCTCCTCTCAACTGGCTCATGTCTGTGTCTCTTGGTCAAACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS CCA 90 bp ACAGACCAAATAGCCTGTTTATACCTCATAAGTCCACCCACCTCCTaGCTACAGATGCAGCTGCTGGCACAGATGCCAGACCTGATGGGA +
Preference number: 5 (lower is better)
Translates to: TDQIACLYLISPPTS*LQMQLLAQMPDLMG
Trigger: TCCCATCAGGTCTGGCATCTGTGCCAGCAGCTGCATCTGTAGCCAGGAGGTGGGTGGACTTATGAGGTATAAACAGGCTATTTGGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS GCA 90 bp TCTTCTGAAAGAGCACTCTGGTCTTCCCTGGGGGTGATCCTCCTCTaGTCTTACCTAGTGAGACACATGACCCGAACTTGGCAAATCAGA +
Preference number: 5 (lower is better)
Translates to: SSERALWSSLGVILL*SYLVRHMTRTWQIR
Trigger: TCTGATTTGCCAAGTTCGGGTCATGTGTCTCACTAGGTAAGAGCAGAGGAGGATCACCCCCAGGGAAGACCAGAGTGCTCTTTCAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS-3UTR CAA 90 bp AGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGGGGACGGTAAAGAGCTaGGCTTGGGGAGTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SREKVTCTIHLLHSLLARGTVKS*AWGVFS
Trigger: GCTGAAAACTCCCCAAGCCAAGCTCTTTACCGTCCC...CCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CAA 90 bp CAACTGCTTACTGAGTGCTTCAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCATTTCTCTGGGTTGGGTaGTCCAATGATGTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: QLLTECFSGLALLWEMTPFLWVG*SNDVLH
Trigger: GTGCAACACATCATTGGACAACCCAACCCAGAGAAA...TGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CAA 90 bp GTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAAC +
Preference number: 5 (lower is better)
Translates to: VERKSLAQFISYIHCWPGVSTMD*SWAATN
Trigger: GTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAAC...GCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CAA 90 bp GACAGGGTGAGTCAATCCCAAGCCATCCTAGCAGGCTGGATGAACTTTTCTAGCCAGCAGGCAGAGGTTTaGGGCAAGTTAGACTTGAGA +
Preference number: 5 (lower is better)
Translates to: DRVSQSQAILAGWMNFSSQQAEV*GKLDLR
Trigger: TCTCAAGTCTAACTTGCCCAAAACCTCTGCCTGCTG...GCTAGAAAAGTTCATCCAGCCTGCTAGGATGGCTTGGGATTGACTCACCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS CCA 90 bp GTGATCCTCCTCTGCTCTTACCTAGTGAGACACATGACCCGAACTTaGCAAATCAGAGCTTTCCGCACCCAGTCTAGTGATTGGTTCATG +
Preference number: 5 (lower is better)
Translates to: VILLCSYLVRHMTRT*QIRAFRTQSSDWFM
Trigger: CATGAACCAATCACTAGACTGGGTGCGGAAAGCTCTGATTTGCCAAGTTCGGGTCATGTGTCTCACTAGGTAAGAGCAGAGGAGGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS-3UTR CAA 90 bp GACTTTGTAGAGCCTTCAGAATACTTTGTGCCCAGCAAATCTTTAGGAGGGGCCGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAAC +
Preference number: 5 (lower is better)
Translates to: DFVEPSEYFVPSKSLGGAVSTMD*SWAATN
Trigger: GTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAAC...GGCCCCTCCTAAAGATTTGCTGGGCACAAAGTATTCTGAAGGCTCTACAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CAA 90 bp TCAGAGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCTTCAGGAGCTTGTGCTaGACTGTGGTGCTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: SESRESHLHNSSPTFTAGFRSLC*TVVLSE
Trigger: CTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGAA...GCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS TCA 90 bp TGCCCGGATCAGCTGATCCTTGTTTCTCTGGGTTGGGTTGTCCAATaGTGTGTTGCACAATGTGGTCAGGTGCATGGTGTAGTACTTGAT +
Preference number: 5 (lower is better)
Translates to: CPDQLILVSLGWVVQ*CVAQCGQVHGVVLD
Trigger: ATCAAGTACTACACCATGCACCTGACCACATTGTGCAACACATCATTGGACAACCCAACCCAGAGAAACAAGGATCAGCTGATCCGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444058.1
ENST00000474627.8
CDS-3UTR CAA 90 bp AGTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGGGTAAAGAGCTTGGCTaGGGGAGTTTTCAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: SREKVTCTIHLLHSLLARGKELG*GSFQLP
Trigger: AGGAAGCTGAAAACTCCCCAAGCCAAGCTCTTTACC...CCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CAA 90 bp CAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTGGCCGACCAGAATCAACTCTaGGTGTACACGTTTAATAGA +
Preference number: 5 (lower is better)
Translates to: QAPLLQGGSNCLLSASVADQNQL*VYTFNR
Trigger: TCTATTAAACGTGTACACCAAGAGTTGATTCTGGTC...GGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CAA 90 bp ATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTGGGCAGCTACAAACTCAATCTCTGTTCAGCTCCCTTaGTGTTCACGGTATAATGAC +
Preference number: 5 (lower is better)
Translates to: IRPKVSTMDLSWAATNSISVQLP*CSRYND
Trigger: GTCATTATACCGTGAACACAAAGGGAGCTGAACAGA...GATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CAA 90 bp CAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTGGCCTTGGGCAAGTTAGACTaGAGAGTAATTGAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: QAPLLQGGSNCLLSASVALGKLD*RVIERE
Trigger: TTCTCTCTCAATTACTCTCAAGTCTAACTTGCCCAA...GGCCACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CAA 90 bp CAACTGCTTACTGAGTGCTTCAGTGGCCTTGCCCTGCTCTGGGAAATGACTCCATCACTCACCAGCTTTTaGTCGATAAAGATACGATTG +
Preference number: 5 (lower is better)
Translates to: QLLTECFSGLALLWEMTPSLTSF*SIKIRL
Trigger: CAATCGTATCTTTATCGACAAAAAGCTGGTGAGTGA...TGGAGTCATTTCCCAGAGCAGGGCAAGGCCACTGAAGCACTCAGTAAGCAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CAA 90 bp ATGGAGAAGTGCAGAGGCATACGTGAAAACAGGGCTCAGCACATTTCCAGGGTGTCGAGAGAAAGTCACTaGCACAATTCATCTCCTACA +
Preference number: 5 (lower is better)
Translates to: MEKCRGIRENRAQHISRVSRESH*HNSSPT
Trigger: TGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGA...CACCCTGGAAATGTGCTGAGCCCTGTTTTCACGTATGCCTCTGCACTTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CAA 90 bp CAGATATCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTAGATTGTCCAATGATGTGTaGCACAATGTGGTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: QISKHAMGDKLFNPLEPRLSNDV*HNVVRC
Trigger: GCACCTGACCACATTGTGCAACACATCATTGGACAA...TCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CAA 90 bp AGCAGATATCCAAACACGCCATGGGAGATAAGCTGTTTAACCCTCTGGAACCTATTTCTCTGGGTTGGGTaGTCCAATGATGTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: SRYPNTPWEISCLTLWNLFLWVG*SNDVLH
Trigger: GTGCAACACATCATTGGACAACCCAACCCAGAGAAA...TAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474627.8
CDS-3UTR CAA 90 bp CTAGCTGACATGGAAATCCTCCCTTTTCTCAGCCCATTCGATGATTGGATCCCATTGTCCAATGATGTGTaGCACAATGTGGTCTTCACC +
Preference number: 5 (lower is better)
Translates to: LADMEILPFLSPFDDWIPLSNDV*HNVVFT
Trigger: GGTGAAGACCACATTGTGCAACACATCATTGGACAA...TGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585101.5
CDS-3UTR CAA 90 bp TTACCAAGCGCCTCTGCTTCAAGGTGGAAGCAACTGCTTACTGAGTGCTTCAGTTCGATAAAGATACGATaGTTAATGCTGTCGGGGCAT +
Preference number: 5 (lower is better)
Translates to: LPSASASRWKQLLTECFSSIKIR*LMLSGH
Trigger: ATGCCCCGACAGCATTAACAATCGTATCTTTATCGA...ACTGAAGCACTCAGTAAGCAGTTGCTTCCACCTTGAAGCAGAGGCGCTTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS-3UTR CAA 90 bp GTCGAGAGAAAGTCACTTGCACAATTCATCTCCTACATTCACTGCTGGCCAGGCTCGAGAGAAAGTCACTaGCACAATTCATCTCCTACA +
Preference number: 5 (lower is better)
Translates to: VERKSLAQFISYIHCWPGSRESH*HNSSPT
Trigger: TGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGA...GCCTGGCCAGCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474627.8
ENST00000581698.1
CDS-3UTR CAA 90 bp CAAGAGAAGGCAGAAGGATACTCCAAATGGAATCCAAAGTTTGGTTTTGTTGACTTGTCCAATGATGTGTaGCACAATGTGGTCTTCACC +
Preference number: 5 (lower is better)
Translates to: QEKAEGYSKWNPKFGFVDLSNDV*HNVVFT
Trigger: GGTGAAGACCACATTGTGCAACACATCATTGGACAA...GTCAACAAAACCAAACTTTGGATTCCATTTGGAGTATCCTTCTGCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5
CDS GCA 72 bp CAGCTCCTCCACATCGCGCCCGAGGGTCTGGGAAGATaGGAGACGCGAAACGGCGCGCCGTCGCCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: QLLHIAPEGLGR*ETRNGAPSPPR
Trigger: GCGCGGCGGCGACGGCGCGCCGTTTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGATGTGGAGGAGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444058.1
CDS CCA 72 bp GCCGGAGGCAGCTCCTCCACATCGCGCCCGAGGGTCTaGGAAGATGCGAGACGCGAAACGGCGCGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: AGGSSSTSRPRV*EDARRETARRR
Trigger: GCGACGGCGCGCCGTTTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGATGTGGAGGAGCTGCCTCCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444058.1
CDS TCA 72 bp GCCCCACTTCTGGATCTGGTACTCCTCCTCCAGGCGTaGCAGCAGCACGGCCTGCTCCACTGTCAGGCGCAG +
Preference number: 6 (lower is better)
Translates to: APLLDLVLLLQA*QQHGLLHCQAQ
Trigger: CTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATCCAGAAGTGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467560.5
ENST00000469327.5
ENST00000474627.8
ENST00000496852.5
CDS CCA 72 bp CCTCTTCCTTTCTGTCGGCGGGGCGTAAGCCCGGGCTaGAGACGGGATGGTTGGCCCCGGACTCATAGAAGC +
Preference number: 6 (lower is better)
Translates to: PLPFCRRGVSPG*RRDGWPRTHRS
Trigger: GCTTCTATGAGTCCGGGGCCAACCATCCCGTCTCCAGCCCGGGCTTACGCCCCGCCGACAGAAAGGAAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000444058.1
ENST00000462733.5
ENST00000474627.8
ENST00000497871.1
ENST00000577586.5
ENST00000584205.5
ENST00000585101.5
CDS CCA 72 bp GCCGGAGGCAGCTCCTCCACATCGCGCCCGAGGGTCTaGGAAGATGCGAGACGCGAAACCTGGAGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: AGGSSSTSRPRV*EDARRETWSRK
Trigger: TTTCCTGCTCCAGGTTTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGATGTGGAGGAGCTGCCTCCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462733.5
ENST00000474627.8
ENST00000497871.1
ENST00000577586.5
ENST00000584205.5
ENST00000585101.5
CDS CAA 90 bp GGGGCCAGACAGGCAAAGGACCAGCCCCCAGGGCCTTGTCGGAATTaGGTAAAGGGTCTACCCTACGAAGCCCTGGGTGGGTCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: GARQAKDQPPGPCRN*VKGLPYEALGGSQG
Trigger: ACCCTGAGACCCACCCAGGGCTTCGTAGGGTAGACCCTTTACCAAATTCCGACAAGGCCCTGGGGGCTGGTCCTTTGCCTGTCTGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497871.1
CDS GCA 72 bp CAGCTCCTCCACATCGCGCCCGAGGGTCTGGGAAGATaGGAGACGCGAAACCTGGAGCAGGAAACACAGAGC +
Preference number: 6 (lower is better)
Translates to: QLLHIAPEGLGR*ETRNLEQETQS
Trigger: GCTCTGTGTTTCCTGCTCCAGGTTTCGCGTCTCGCATCTTCCCAGACCCTCGGGCGCGATGTGGAGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462733.5
ENST00000474627.8
ENST00000497871.1
ENST00000577586.5
ENST00000584205.5
ENST00000585101.5
CDS CCA 72 bp CGCCCGAGGGTCTGGGAAGATGCGAGACGCGAAACCTaGAGCAGGAAACACAGAGCGATGGGATCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: RPRVWEDARRET*SRKHRAMGSPK
Trigger: CTTTGGGGATCCCATCGCTCTGTGTTTCCTGCTCCAGGTTTCGCGTCTCGCATCTTCCCAGACCCTCGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474627.8
ENST00000497871.1
ENST00000577586.5
ENST00000584205.5
ENST00000585101.5
CDS CAA 72 bp CAGGCAAAGGACCAGCCCCCAGGGCCTTGTCGGAATTaGGTAAAGGGTCTACCCTACGAAGCCCTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: QAKDQPPGPCRN*VKGLPYEALGG
Trigger: CCCACCCAGGGCTTCGTAGGGTAGACCCTTTACCAAATTCCGACAAGGCCCTGGGGGCTGGTCCTTTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497871.1
CDS CAA 72 bp GGGGGCCAGACAGGCAAAGGACCAGCCCCCAGGGCCTaGTCGGAATTTGGTAAAGGGTCTACCCTACGAAGC +
Preference number: 6 (lower is better)
Translates to: GGQTGKGPAPRA*SEFGKGSTLRS
Trigger: GCTTCGTAGGGTAGACCCTTTACCAAATTCCGACAAGGCCCTGGGGGCTGGTCCTTTGCCTGTCTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497871.1
CDS CAA 90 bp GCTGAGTGTGCTCTGCCCAGGCCTCACTCCTTCAGGAGCTTGTGCTaGACTGTGGTGCTCTCGGAGCAGAGATGGATGAAGAGGGTGCCG +
Preference number: 6 (lower is better)
Translates to: AECALPRPHSFRSLC*TVVLSEQRWMKRVP
Trigger: CGGCACCCTCTTCATCCATCTCTGCTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467560.5
ENST00000474627.8
ENST00000496852.5
ENST00000581698.1
CDS TCA 72 bp ACCCAAAACAGGGCAGCTGCCACAACCTACCCCTTGTaGGTCCCAGCAGCCCTAGCAGAGAACAGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: TQNRAAATTYPL*VPAALAENRSE
Trigger: CTCACTCCTGTTCTCTGCTAGGGCTGCTGGGACTCACAAGGGGTAGGTTGTGGCAGCTGCCCTGTTTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS CCA 72 bp GCCAGGGCCTCGCTGGGGACGGTAAAGAGCTTGGCTTaGGGAGTTTTCAGCTTCCTGTGGTCCAGGTTTATC +
Preference number: 6 (lower is better)
Translates to: ARASLGTVKSLA*GVFSFLWSRFI
Trigger: GATAAACCTGGACCACAGGAAGCTGAAAACTCCCCAAGCCAAGCTCTTTACCGTCCCCAGCGAGGCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000444058.1
ENST00000474627.8
ENST00000497871.1
ENST00000577586.5
CDS CAA 90 bp ACTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAACTCAATCCCTGCAGGGACACAAGCC +
Preference number: 6 (lower is better)
Translates to: TVRRRSIRPKVSTMD*SWAATNSIPAGTQA
Trigger: GGCTTGTGTCCCTGCAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465337.2
ENST00000467560.5
CDS CAA 90 bp TATCCTGCTGAGTGTGCTCTGCCCAGGCCTCACTCCTTCAGGAGCTaGTGCTTGACTGTGGTGCTCTCGGAGCAGAGATGGATGAAGAGG +
Preference number: 6 (lower is better)
Translates to: YPAECALPRPHSFRS*CLTVVLSEQRWMKR
Trigger: CCTCTTCATCCATCTCTGCTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467560.5
ENST00000474627.8
ENST00000496852.5
ENST00000581698.1
CDS TCA 72 bp GGCTACAGATGCAGCTGCTGGCACAGATGCCAGACCTaGTGGGACCAAGCTAGAGGTCAGGCTGTGCCATTT +
Preference number: 6 (lower is better)
Translates to: GYRCSCWHRCQT*WDQARGQAVPF
Trigger: AAATGGCACAGCCTGACCTCTAGCTTGGTCCCATCAGGTCTGGCATCTGTGCCAGCAGCTGCATCTGTAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469327.5
ENST00000496852.5
CDS TCA 72 bp CTTGTGAGTCCCAGCAGCCCTAGCAGAGAACAGGAGTaGGTGGTGCAAAGAGCCATCCAGCGATTGTCCCAC +
Preference number: 6 (lower is better)
Translates to: LVSPSSPSREQE*VVQRAIQRLSH
Trigger: GTGGGACAATCGCTGGATGGCTCTTTGCACCACTCACTCCTGTTCTCTGCTAGGGCTGCTGGGACTCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS GCA 72 bp GTCCCAGCAGCCCTAGCAGAGAACAGGAGTGAGTGGTaGAAAGAGCCATCCAGCGATTGTCCCACTCTTCTG +
Preference number: 6 (lower is better)
Translates to: VPAALAENRSEW*KEPSSDCPTLL
Trigger: CAGAAGAGTGGGACAATCGCTGGATGGCTCTTTGCACCACTCACTCCTGTTCTCTGCTAGGGCTGCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS CAA 72 bp CGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAACTCAATCCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: RRSIRPKVSTMD*SWAATNSIPAG
Trigger: CCCTGCAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465337.2
ENST00000467560.5
CDS TCA 72 bp CTTGTAAAGCCCATGTGTTGTAAGATGCCAGGTGGCTaGCGAGCACCTCCCGAGTTTTGGCAGGGATGCTGG +
Preference number: 6 (lower is better)
Translates to: LVKPMCCKMPGG*RAPPEFWQGCW
Trigger: CCAGCATCCCTGCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000444058.1
ENST00000469327.5
ENST00000474627.8
ENST00000488753.1
ENST00000496852.5
CDS TCA 72 bp GCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACTCAATCCCTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: AGQSGPRLAPWT*AGQLQTQSLQG
Trigger: TCCCTGCAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465337.2
ENST00000467560.5
CDS TCA 72 bp CTTCCTCTCACCCTAGTAGGGCACAGGGAGGAGCTCTaGCATTGGATCTTCCAGCTACCTTTCCTGGTGACC +
Preference number: 6 (lower is better)
Translates to: LPLTLVGHREEL*HWIFQLPFLVT
Trigger: GGTCACCAGGAAAGGTAGCTGGAAGATCCAATGTCAGAGCTCCTCCCTGTGCCCTACTAGGGTGAGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS GCA 72 bp GTAGCAGATGGTGTCGGTGTCCAGAAACTTCACGGCTaGCCGGATCAGCTGATCCTTGTTTCTCTGGGTTGG +
Preference number: 6 (lower is better)
Translates to: VADGVGVQKLHG*PDQLILVSLGW
Trigger: CCAACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGCCGTGAAGTTTCTGGACACCGACACCATCTGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444058.1
ENST00000462733.5
ENST00000474627.8
ENST00000488753.1
ENST00000584205.5
ENST00000585101.5
CDS GCA 72 bp AGAGCACTCTGGTCTTCCCTGGGGGTGATCCTCCTCTaGTCTTACCTAGTGAGACACATGACCCGAACTTGG +
Preference number: 6 (lower is better)
Translates to: RALWSSLGVILL*SYLVRHMTRTW
Trigger: CCAAGTTCGGGTCATGTGTCTCACTAGGTAAGAGCAGAGGAGGATCACCCCCAGGGAAGACCAGAGTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465337.2
CDS GCA 72 bp GGTCCACACCCGCTTGACCCAGATGCTGAATGGGAATaGTGTGCCAGATGCTCAGTCTTTGCATCTCTACCC +
Preference number: 6 (lower is better)
Translates to: GPHPLDPDAEWE*CARCSVFASLP
Trigger: GGGTAGAGATGCAAAGACTGAGCATCTGGCACAGCATTCCCATTCAGCATCTGGGTCAAGCGGGTGTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS CCA 72 bp ACCCTGGGTCCACACCCGCTTGACCCAGATGCTGAATaGGAATGCTGTGCCAGATGCTCAGTCTTTGCATCT +
Preference number: 6 (lower is better)
Translates to: TLGPHPLDPDAE*ECCARCSVFAS
Trigger: AGATGCAAAGACTGAGCATCTGGCACAGCATTCCCATTCAGCATCTGGGTCAAGCGGGTGTGGACCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS CAA 72 bp CGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAACTCAATCCCTAGTGAG +
Preference number: 6 (lower is better)
Translates to: RRSIRPKVSTMD*SWAATNSIPSE
Trigger: CTCACTAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469327.5
CDS CAA 90 bp ACTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAACTCAATCCCTAGTGAGACACATGAC +
Preference number: 6 (lower is better)
Translates to: TVRRRSIRPKVSTMD*SWAATNSIPSETHD
Trigger: GTCATGTGTCTCACTAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469327.5
CDS CAA 90 bp ACTGTCAGGCGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAACTCAATCCCTTGTAAAGCCCATGTG +
Preference number: 6 (lower is better)
Translates to: TVRRRSIRPKVSTMD*SWAATNSIPCKAHV
Trigger: CACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474627.8
ENST00000488753.1
ENST00000496852.5
CDS TCA 72 bp TCGGTGTCCAGAAACTTCACGGCTGCCCGGATCAGCTaGTCCTTGTTTCTCTGGGTTGGGTTGTCCAATGAT +
Preference number: 6 (lower is better)
Translates to: SVSRNFTAARIS*SLFLWVGLSND
Trigger: ATCATTGGACAACCCAACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGCCGTGAAGTTTCTGGACACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444058.1
ENST00000462733.5
ENST00000474627.8
ENST00000488753.1
ENST00000584205.5
ENST00000585101.5
CDS TCA 72 bp GCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACTCAATCCCTAGTGAGA +
Preference number: 6 (lower is better)
Translates to: AGQSGPRLAPWT*AGQLQTQSLVR
Trigger: TCTCACTAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469327.5
CDS CCA 72 bp ATAGCCTGTTTATACCTCATAAGTCCACCCACCTCCTaGCTACAGATGCAGCTGCTGGCACAGATGCCAGAC +
Preference number: 6 (lower is better)
Translates to: IACLYLISPPTS*LQMQLLAQMPD
Trigger: GTCTGGCATCTGTGCCAGCAGCTGCATCTGTAGCCAGGAGGTGGGTGGACTTATGAGGTATAAACAGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS CAA 72 bp CGGCTGCCCGGATCAGCTGATCCTTGTTTCTCTGGGTaGGGTTGTCCAATGATGTGTTGCACAATGTGGTCA +
Preference number: 6 (lower is better)
Translates to: RLPGSADPCFSG*GCPMMCCTMWS
Trigger: TGACCACATTGTGCAACACATCATTGGACAACCCAACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444058.1
ENST00000474627.8
CDS CAA 72 bp CGGCTGCCCGGATCAGCTGATCCTTGTTTCTCTGGGTaGGGTTGTCCAATGATGTGTTGCACAATGTGGTCT +
Preference number: 6 (lower is better)
Translates to: RLPGSADPCFSG*GCPMMCCTMWS
Trigger: AGACCACATTGTGCAACACATCATTGGACAACCCAACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462733.5
ENST00000488753.1
ENST00000584205.5
ENST00000585101.5
CDS CAA 90 bp GAAACTTCACGGCTGCCCGGATCAGCTGATCCTTGTTTCTCTGGGTaGGGTTGTCCAATGATGTGTTGCACAATGTGGTCAGGTGCATGG +
Preference number: 6 (lower is better)
Translates to: ETSRLPGSADPCFSG*GCPMMCCTMWSGAW
Trigger: CCATGCACCTGACCACATTGTGCAACACATCATTGGACAACCCAACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGCCGTGAAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444058.1
ENST00000474627.8
CDS CAA 90 bp GAAACTTCACGGCTGCCCGGATCAGCTGATCCTTGTTTCTCTGGGTaGGGTTGTCCAATGATGTGTTGCACAATGTGGTCTTCACCCTGT +
Preference number: 6 (lower is better)
Translates to: ETSRLPGSADPCFSG*GCPMMCCTMWSSPC
Trigger: ACAGGGTGAAGACCACATTGTGCAACACATCATTGGACAACCCAACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGCCGTGAAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462733.5
ENST00000584205.5
ENST00000585101.5
CDS TCA 72 bp GCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTTaGGCTGGGCAGCTACAAACTCAATCCCTTGTAAAG +
Preference number: 6 (lower is better)
Translates to: AGQSGPRLAPWT*AGQLQTQSLVK
Trigger: CTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474627.8
ENST00000488753.1
ENST00000496852.5
CDS CAA 72 bp CGCAGGTCAATCAGGCCCAAGGTTAGCACCATGGACTaGAGCTGGGCAGCTACAAACTCAATCCCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: RRSIRPKVSTMD*SWAATNSIPCK
Trigger: TTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474627.8
ENST00000488753.1
ENST00000496852.5
CDS TCA 72 bp AGCTCTGACATTGGATCTTCCAGCTACCTTTCCTGGTaGCCCAACTGTCCTTCATTTCCTGTCAGGATCCCT +
Preference number: 6 (lower is better)
Translates to: SSDIGSSSYLSW*PNCPSFPVRIP
Trigger: AGGGATCCTGACAGGAAATGAAGGACAGTTGGGTCACCAGGAAAGGTAGCTGGAAGATCCAATGTCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS CCA 72 bp TCAATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTaGGCAGCTACAAACTCAATCCCTAGTGAGACACAT +
Preference number: 6 (lower is better)
Translates to: SIRPKVSTMDLS*AATNSIPSETH
Trigger: ATGTGTCTCACTAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469327.5
CDS CCA 72 bp TCAATCAGGCCCAAGGTTAGCACCATGGACTTGAGCTaGGCAGCTACAAACTCAATCCCTTGTAAAGCCCAT +
Preference number: 6 (lower is better)
Translates to: SIRPKVSTMDLS*AATNSIPCKAH
Trigger: ATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474627.8
ENST00000488753.1
ENST00000496852.5
CDS CCA 72 bp TGGTTCTCAAAGTGTGGCCCTGGCACCAGCATCGCCTaGGAACTTGTTAGAAATACACATTCTCAGGTTGCA +
Preference number: 6 (lower is better)
Translates to: WFSKCGPGTSIA*ELVRNTHSQVA
Trigger: TGCAACCTGAGAATGTGTATTTCTAACAAGTTCCCAGGCGATGCTGGTGCCAGGGCCACACTTTGAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS CAA 90 bp GAAACTTCACGGCTGCCCGGATCAGCTGATCCTTGTTTCTCTGGGTaGGGTTGTCCAATGATGTGTTGCACAATGTGGTCTGAATCAAAG +
Preference number: 6 (lower is better)
Translates to: ETSRLPGSADPCFSG*GCPMMCCTMWSESK
Trigger: CTTTGATTCAGACCACATTGTGCAACACATCATTGGACAACCCAACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGCCGTGAAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488753.1
CDS TCA 72 bp CAGCTGATCCTTGTTTCTCTGGGTTGGGTTGTCCAATaGTGTGTTGCACAATGTGGTCAGGTGCATGGTGTA +
Preference number: 6 (lower is better)
Translates to: QLILVSLGWVVQ*CVAQCGQVHGV
Trigger: TACACCATGCACCTGACCACATTGTGCAACACATCATTGGACAACCCAACCCAGAGAAACAAGGATCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444058.1
ENST00000474627.8
CDS TCA 72 bp GTTGGGTTGTCCAATGATGTGTTGCACAATGTGGTCTaGATCAAAGGCAAAAACCACCCTGTCACTGCCTGC +
Preference number: 6 (lower is better)
Translates to: VGLSNDVLHNVV*IKGKNHPVTAC
Trigger: GCAGGCAGTGACAGGGTGGTTTTTGCCTTTGATTCAGACCACATTGTGCAACACATCATTGGACAACCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488753.1
CDS CAA 72 bp TCCTTGTTTCTCTGGGTTGGGTTGTCCAATGATGTGTaGCACAATGTGGTCTTCACCCTGTGTGATGCTGAC +
Preference number: 6 (lower is better)
Translates to: SLFLWVGLSNDV*HNVVFTLCDAD
Trigger: GTCAGCATCACACAGGGTGAAGACCACATTGTGCAACACATCATTGGACAACCCAACCCAGAGAAACAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462733.5
ENST00000584205.5
ENST00000585101.5
CDS TCA 72 bp GAGGTGGCTTCAGGAAGCTTTTCTCAGCCCATTCGATaGTTGGATCCCACTCATTCCTTTGAAGTTCCACTA +
Preference number: 6 (lower is better)
Translates to: EVASGSFSQPIR*LDPTHSFEVPL
Trigger: TAGTGGAACTTCAAAGGAATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGCTTCCTGAAGCCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584205.5
CDS CAA 72 bp ACCCTAAATGCCCCCAAATATTTGACAGGTCCAAGCTaGCCACACTGTTACTGCCATCCTAAAGCAGATCCA +
Preference number: 6 (lower is better)
Translates to: TLNAPKYLTGPS*PHCYCHPKADP
Trigger: TGGATCTGCTTTAGGATGGCAGTAACAGTGTGGCAAGCTTGGACCTGTCAAATATTTGGGGGCATTTAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS CAA 90 bp GTAAGCTTGAGTTTGAGAACCACTACCCTAAATGCCCCCAAATATTaGACAGGTCCAAGCTTGCCACACTGTTACTGCCATCCTAAAGCA +
Preference number: 6 (lower is better)
Translates to: VSLSLRTTTLNAPKY*TGPSLPHCYCHPKA
Trigger: TGCTTTAGGATGGCAGTAACAGTGTGGCAAGCTTGGACCTGTCAAATATTTGGGGGCATTTAGGGTAGTGGTTCTCAAACTCAAGCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS CAA 72 bp AGTTTGAGAACCACTACCCTAAATGCCCCCAAATATTaGACAGGTCCAAGCTTGCCACACTGTTACTGCCAT +
Preference number: 6 (lower is better)
Translates to: SLRTTTLNAPKY*TGPSLPHCYCH
Trigger: ATGGCAGTAACAGTGTGGCAAGCTTGGACCTGTCAAATATTTGGGGGCATTTAGGGTAGTGGTTCTCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS CAA 72 bp ACAAGCCCTCTAGGGGATTCTAGTGTAAGCTTGAGTTaGAGAACCACTACCCTAAATGCCCCCAAATATTTG +
Preference number: 6 (lower is better)
Translates to: TSPLGDSSVSLS*RTTTLNAPKYL
Trigger: CAAATATTTGGGGGCATTTAGGGTAGTGGTTCTCAAACTCAAGCTTACACTAGAATCCCCTAGAGGGCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496852.5
CDS TCA 72 bp AGCTACAAACTCAATCCCTTTTCTCAGCCCATTCGATaGTTGGATCCCACTCATTCCTTTGAAGTTCCACTA +
Preference number: 6 (lower is better)
Translates to: SYKLNPFSQPIR*LDPTHSFEVPL
Trigger: TAGTGGAACTTCAAAGGAATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGGGATTGAGTTTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462733.5