RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATPAF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000123472

Ensembl transcript IDs: ENST00000329231.8, ENST00000371937.8, ENST00000460928.1, ENST00000474020.5, ENST00000487193.1, ENST00000492233.5, ENST00000525633.1, ENST00000526821.5, ENST00000529214.5, ENST00000532925.5, ENST00000534216.5, ENST00000542495.5, ENST00000574428.5, ENST00000576409.5

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGTTCTAAGTCTTATTTTGGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: EEGVGSRLSRAESTR*RANLYSSKSYFGSG
Trigger: CCCAGAACCAAAATAAGACTTAGAACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR TCA 90 bp TTGGGTTCAGAAGGCTGGTGTGTAACCACCGTCCTTTCCTATCACTaGGCTTGGAGCCACAACAGTGACACTACAAACGAAAGATGGGTT +
Preference number: 1 (lower is better)
Translates to: LGSEGWCVTTVLSYH*AWSHNSDTTNERWV
Trigger: AACCCATCTTTCGTTTGTAGTGTCACTGTTGTGGCTCCAAGCTCAGTGATAGGAAAGGACGGTGGTTACACACCAGCCTTCTGAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR CCA 90 bp AGAACAGCTACGTGGTACTTTAGTCATGCCCCACACATTTATCCATaGACACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGG +
Preference number: 1 (lower is better)
Translates to: RTATWYFSHAPHIYP*THPTWQLGTEDKSR
Trigger: CCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGGCATGACTAAAGTACCACGTAGCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR CCA 90 bp GTCATGCCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTaGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGC +
Preference number: 1 (lower is better)
Translates to: VMPHTFIHGHILLGS*GLRTNPGGMIKTNG
Trigger: GCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGGCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR CCA 90 bp CGAATGGCCACTTCTTACTCCTTTTTCCATCATTTCCTCACCCGCTaGTGGAGGTGTATCAATGTACTATGTATGGCTAATAACTGGGCC +
Preference number: 1 (lower is better)
Translates to: RMATSYSFFHHFLTR*WRCINVLCMANNWA
Trigger: GGCCCAGTTATTAGCCATACATAGTACATTGATACACCTCCACCAGCGGGTGAGGAAATGATGGAAAAAGGAGTAAGAAGTGGCCATTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR CCA 90 bp ATGGCCACTTCTTACTCCTTTTTCCATCATTTCCTCACCCGCTGGTaGAGGTGTATCAATGTACTATGTATGGCTAATAACTGGGCCCAT +
Preference number: 1 (lower is better)
Translates to: MATSYSFFHHFLTRW*RCINVLCMANNWAH
Trigger: ATGGGCCCAGTTATTAGCCATACATAGTACATTGATACACCTCCACCAGCGGGTGAGGAAATGATGGAAAAAGGAGTAAGAAGTGGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR GCA 90 bp TGTACAGTTCTAAGTCTTATTTTGGTTCTGGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTCCAATTCAGCGATGACAGACATATA +
Preference number: 1 (lower is better)
Translates to: CTVLSLILVLGTFQF*SKSALLQFSDDRHI
Trigger: TATATGTCTGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCCCAGAACCAAAATAAGACTTAGAACTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR GCA 90 bp TTATTTTGGTTCTGGGCACATTTCAGTTCTGCTCCAAGTCCGCTTTaGTCCAATTCAGCGATGACAGACATATATTTGAACTCATTTGGT +
Preference number: 1 (lower is better)
Translates to: LFWFWAHFSSAPSPL*SNSAMTDIYLNSFG
Trigger: ACCAAATGAGTTCAAATATATGTCTGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCCCAGAACCAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR GCA 90 bp ATTCTTCTGGAAGGAAGAAAACACACACACACAAACTGCGAATACTaGTTAAATTCCCACTCACCACATTCAGTGTCATATAACCAGATC +
Preference number: 1 (lower is better)
Translates to: ILLEGRKHTHTNCEY*LNSHSPHSVSYNQI
Trigger: GATCTGGTTATATGACACTGAATGTGGTGAGTGGGAATTTAAGCAGTATTCGCAGTTTGTGTGTGTGTGTTTTCTTCCTTCCAGAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR TCA 90 bp AAGTATGCTGAGATAATTATCAGAATGTTCAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAA +
Preference number: 1 (lower is better)
Translates to: KYAEIIIRMFRYLCS*ISSNRAHLCDCLRQ
Trigger: TTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTCTGATAATTATCTCAGCATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp CATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGCAGGGAGGTAGAGGTTaGAGCGAGCTGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: HGHILLGSWGLRTNPGGMQGGRG*SELRSR
Trigger: GCGTGATCTCAGCTCGCTGCAACCTCTACCTCCCTG...CATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR CCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACATAAAATCAGCTGGCTaGCTGCAGCTTCCCCTCGGG +
Preference number: 2 (lower is better)
Translates to: GLISVTACDKHIGQLITNIKSAG*LQLPLG
Trigger: CCCGAGGGGAAGCTGCAGCCAGCCAGCTGATTTTAT...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR-3UTR TCA 90 bp CCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACATTGGCAGTTGGGGACTaGGGACAAATCCAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: PHTFIHGHILLGSWGLRTLAVGD*GQIQEE
Trigger: TTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAA...TGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR CCA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTTTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 2 (lower is better)
Translates to: VIGLISVTACDKHIGQLIFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 2 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGT +
Preference number: 2 (lower is better)
Translates to: IGLISVTACDKHIGQLITAESTR*RANLYS
Trigger: ACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGC...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 2 (lower is better)
Translates to: GLISVTACDKHIGQLITNAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACTTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 2 (lower is better)
Translates to: VPEYQVIGLISVTACDKHFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAATGTTGGACAGGACTaGGCCCGGTTCCAGATCAAA +
Preference number: 2 (lower is better)
Translates to: IGLISVTACDKHIGQLITNVGQD*ARFQIK
Trigger: TTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATT...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR-3UTR GCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 2 (lower is better)
Translates to: IGLISVTACDKHIGQLITAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCATGCTTTTGTTCAGCTaGCTGGTGCCTGGGAAGGAT +
Preference number: 2 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVMLLFS*LVPGKD
Trigger: ATCCTTCCCAGGCACCAGTCAGCTGAACAAAAGCAT...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 2 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGGGTGCCACAAACTATaGTTTAATAGTATGCAGGCC +
Preference number: 2 (lower is better)
Translates to: GLISVTACDKHIGQLITNGCHKL*FNSMQA
Trigger: GGCCTGCATACTATTAAACCATAGTTTGTGGCACCC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp CCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACATCCCCACATCCAATCTaGGAACATTTGCTTTCATCC +
Preference number: 2 (lower is better)
Translates to: PHTFIHGHILLGSWGLRTSPHPI*EHLLSS
Trigger: GGATGAAAGCAAATGTTCCCAGATTGGATGTGGGGA...TGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR TCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGT +
Preference number: 2 (lower is better)
Translates to: GTFVPEYQVIGLISVTACAESTR*RANLYS
Trigger: ACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGC...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCATACCTGAAATTTGCTaGTACCCCAAGCCAGCTACT +
Preference number: 2 (lower is better)
Translates to: IGLISVTACDKHIGQLITIPEIC*YPKPAT
Trigger: AGTAGCTGGCTTGGGGTATCAGCAAATTTCAGGTAT...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 2 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTCAAAGTGGCCAGAATaGAACTGCGCTGTTACACTG +
Preference number: 2 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVSKWPE*NCAVTL
Trigger: CAGTGTAACAGCGCAGTTGCATTCTGGCCACTTTGA...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAGCTGACTGGTGCCTaGGAAGGATTAAAGCCCATA +
Preference number: 2 (lower is better)
Translates to: EYQVIGLISVTACDKHIGQLTGA*EGLKPI
Trigger: TATGGGCTTTAATCCTTCCCAGGCACCAGTCAGCTG...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCGGGTGCCACAAACTATaGTTTAATAGTATGCAGGCC +
Preference number: 2 (lower is better)
Translates to: IGLISVTACDKHIGQLITGCHKL*FNSMQA
Trigger: GGCCTGCATACTATTAAACCATAGTTTGTGGCACCC...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR CAA 90 bp AGTCAACTAGGTGAAGGGCCAACCTGTACAGTTCTAAGTCTTATTTaGGTTCTGGGCACATTTCAGTTCTGCTCCAAGTCCGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: SQLGEGPTCTVLSLI*VLGTFQFCSKSALL
Trigger: GAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCCCAGAACCAAAATAAGACTTAGAACTGTACAGGTTGGCCCTTCACCTAGTTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR-3UTR TCA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTGCTCATTATAAATGCTaGGCTCTTGAGTTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: VIGLISVTACDKHIGQLIAHYKC*ALEFLR
Trigger: CCTCAGGAACTCAAGAGCTCAGCATTTATAATGAGC...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: EYQVIGLISVTACDKHIGISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAGGATGTTTGGCTTATaGTTTTGTTCAGCTGACTGG +
Preference number: 2 (lower is better)
Translates to: IGLISVTACDKHIGQLITRMFGL*FCSADW
Trigger: CCAGTCAGCTGAACAAAAGCATAAGCCAAACATCCT...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCTGTCTTGTAGGTCCTTaGCTGTCTCTTGTTATAACC +
Preference number: 2 (lower is better)
Translates to: IGLISVTACDKHIGQLITCLVGP*LSLVIT
Trigger: GGTTATAACAAGAGACAGCCAAGGACCTACAAGACA...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGGCTCATTATAAATGCTaGGCTCTTGAGTTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: EYQVIGLISVTACDKHIGAHYKC*ALEFLR
Trigger: CCTCAGGAACTCAAGAGCTCAGCATTTATAATGAGC...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTGCTCATTATAAATGCTaGGCTCTTGAGTTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSAHYKC*ALEFLR
Trigger: CCTCAGGAACTCAAGAGCTCAGCATTTATAATGAGC...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCT +
Preference number: 2 (lower is better)
Translates to: IGLISVTACDKHIGQLITRYLCS*ISSNRA
Trigger: AGCCCTATTACTTGATATTCAGGAACAAAGGTACCT...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GGAATCCATTTCTGCAGTCATCAGCACTATGCCCTTTTCTTCCTTAAGTTCAGGATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: GIHFCSHQHYALFFLKFRISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...CCTGAACTTAAGGAAGAAAAGGGCATAGTGCTGATGACTGCAGAAATGGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR-3UTR GCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTGCGCTGTTACACTGTaGAAAATCAAGTCAACTGTC +
Preference number: 2 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVCAVTL*KIKSTV
Trigger: GACAGTTGACTTGATTTTGCACAGTGTAACAGCGCA...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp ATTTCCTCACCCGCTGGTGGAGGTGTATCAATGTACTATGTATGGCTAATAACTTGTTCAGCTGACTGGTaGCTGGGAAGGATTAAAGCC +
Preference number: 2 (lower is better)
Translates to: ISSPAGGGVSMYYVWLITCSADW*LGRIKA
Trigger: GGCTTTAATCCTTCCCAGGCACCAGTCAGCTGAACA...AGTTATTAGCCATACATAGTACATTGATACACCTCCACCAGCGGGTGAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR GCA 90 bp GTCATGCCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGCAATCTGGGAACATTTaGTTTCATCCACTTTTTCGT +
Preference number: 2 (lower is better)
Translates to: VMPHTFIHGHILLGSWGLQSGNI*FHPLFR
Trigger: ACGAAAAAGTGGATGAAAGCAAATGTTCCCAGATTG...CAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGGCATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR CCA 90 bp ATTTCCTCACCCGCTGGTGGAGGTGTATCAATGTACTATGTATGGCTAATAACTCAGCTGACTGGTGCCTaGGAAGGATTAAAGCCCATA +
Preference number: 2 (lower is better)
Translates to: ISSPAGGGVSMYYVWLITQLTGA*EGLKPI
Trigger: TATGGGCTTTAATCCTTCCCAGGCACCAGTCAGCTG...AGTTATTAGCCATACATAGTACATTGATACACCTCCACCAGCGGGTGAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR TCA 90 bp CTGAACTTGGTTGGCGATGCACTGTGCCTCAGCAACATTCAGAAATGTGGAATCAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCT +
Preference number: 2 (lower is better)
Translates to: LNLVGDALCLSNIQKCGIRYLCS*ISSNRA
Trigger: AGCCCTATTACTTGATATTCAGGAACAAAGGTACCT...GATTCCACATTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR-3UTR CCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGTGTCTTGTAGGTCCTTaGCTGTCTCTTGTTATAACC +
Preference number: 2 (lower is better)
Translates to: EYQVIGLISVTACDKHIGCLVGP*LSLVIT
Trigger: GGTTATAACAAGAGACAGCCAAGGACCTACAAGACA...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp TATTTGGAGTTTGCAAAGGGGGCCACTATGGGAGACAAAGAACAGAGGAACCTATGTATGGCTAATAACTaGGCCCATCTGGAAAGACAA +
Preference number: 2 (lower is better)
Translates to: YLEFAKGATMGDKEQRNLCMANN*AHLERQ
Trigger: TTGTCTTTCCAGATGGGCCCAGTTATTAGCCATACA...TAGGTTCCTCTGTTCTTTGTCTCCCATAGTGGCCCCCTTTGCAAACTCCAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR TCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCT +
Preference number: 2 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSRYLCS*ISSNRA
Trigger: AGCCCTATTACTTGATATTCAGGAACAAAGGTACCT...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCT +
Preference number: 2 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLRYLCS*ISSNRA
Trigger: AGCCCTATTACTTGATATTCAGGAACAAAGGTACCT...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp GAACCTAAATATCCTATAGTTAGCATCCACAGGAAAGAAAGACCTGGCAATGTAGTCCTTTCCTATCACTaGGCTTGGAGCCACAACAGT +
Preference number: 2 (lower is better)
Translates to: EPKYPIVSIHRKERPGNVVLSYH*AWSHNS
Trigger: ACTGTTGTGGCTCCAAGCTCAGTGATAGGAAAGGAC...TACATTGCCAGGTCTTTCTTTCCTGTGGATGCTAACTATAGGATATTTAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR GCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGTCAAAGTGGCCAGAATaGAACTGCGCTGTTACACTG +
Preference number: 2 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVSKWPE*NCAVTL
Trigger: CAGTGTAACAGCGCAGTTGCATTCTGGCCACTTTGA...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTATGGTTTAATAGTATaGAGGCCCTGTACCTGTTTA +
Preference number: 2 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVYGLIV*RPCTCL
Trigger: TAAACAGGTACAGGGCCTGCATACTATTAAACCATA...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR CAA 90 bp CTTATTTTGGTTCTGGGCACATTTCAGTTCTGCTCCAAGTCCGCTTaGCTCCAATTCAGCGATGACAGACATATATTTGAACTCATTTGG +
Preference number: 2 (lower is better)
Translates to: LILVLGTFQFCSKSA*LQFSDDRHIFELIW
Trigger: CCAAATGAGTTCAAATATATGTCTGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCCCAGAACCAAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR-3UTR GCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGTATGGTTTAATAGTATaGAGGCCCTGTACCTGTTTA +
Preference number: 2 (lower is better)
Translates to: EYQVIGLISVTACDKHIGYGLIV*RPCTCL
Trigger: TAAACAGGTACAGGGCCTGCATACTATTAAACCATA...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCCCTGATGGGAATATCTaGTTATTCTACAGTTTAAAC +
Preference number: 2 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVPDGNI*LFYSLN
Trigger: GTTTAAACTGTAGAATAACCAGATATTCCCATCAGG...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGGGGTGCCACAAACTATaGTTTAATAGTATGCAGGCC +
Preference number: 2 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVGCHKL*FNSMQA
Trigger: GGCCTGCATACTATTAAACCATAGTTTGTGGCACCC...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGAGGATGTTTGGCTTATaGTTTTGTTCAGCTGACTGG +
Preference number: 2 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVRMFGL*FCSADW
Trigger: CCAGTCAGCTGAACAAAAGCATAAGCCAAACATCCT...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp GGTGAAGGGCCAACCTGTACAGTTCTAAGTCTTATTTTGGTTCTGGGCACATTTGTAGACTGTATCTTTTaGTGCAAAATATTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: GEGPTCTVLSLILVLGTFVDCIF*CKILLP
Trigger: TGGCAGCAATATTTTGCAGCAAAAGATACAGTCTAC...AAATGTGCCCAGAACCAAAATAAGACTTAGAACTGTACAGGTTGGCCCTTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR-3UTR CCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCCTGATGGGAATATCTaGTTATTCTACAGTTTAAAC +
Preference number: 2 (lower is better)
Translates to: EYQVIGLISVTACDKHIGPDGNI*LFYSLN
Trigger: GTTTAAACTGTAGAATAACCAGATATTCCCATCAGG...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR TCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCT +
Preference number: 2 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVRYLCS*ISSNRA
Trigger: AGCCCTATTACTTGATATTCAGGAACAAAGGTACCT...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR GCA 90 bp CTCTCTCAATACATAGACTCAAAGGTGCAACAAAATAGACACGGCTCAGAGAATTATGGTTTAATAGTATaGAGGCCCTGTACCTGTTTA +
Preference number: 2 (lower is better)
Translates to: LSQYIDSKVQQNRHGSENYGLIV*RPCTCL
Trigger: TAAACAGGTACAGGGCCTGCATACTATTAAACCATA...ATTCTCTGAGCCGTGTCTATTTTGTTGCACCTTTGAGTCTATGTATTGAGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR CCA 72 bp GCATCTGTCTTAATTCAGGCTTCTGCAGCCCACACCTaGATTACTCCATATTCTCCCTGGCGCTGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: ASVLIQASAAHT*ITPYSPWRWPL
Trigger: GAGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCCTGAATTAAGACAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
3UTR-3UTR CAA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGC +
Preference number: 3 (lower is better)
Translates to: IGLISVTACDKHIGQLITVEELN*VGDALC
Trigger: GCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTAC...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR TCA 72 bp GAAGGCTGGTGTGTAACCACCGTCCTTTCCTATCACTaGGCTTGGAGCCACAACAGTGACACTACAAACGAA +
Preference number: 3 (lower is better)
Translates to: EGWCVTTVLSYH*AWSHNSDTTNE
Trigger: TTCGTTTGTAGTGTCACTGTTGTGGCTCCAAGCTCAGTGATAGGAAAGGACGGTGGTTACACACCAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR GCA 72 bp GGCTGCAGCTTCCCCTCGGGTCTGAATATTTATAAGTaGAGTGAAGTGGAGTTCAGTACCTGTCCATTGTCC +
Preference number: 3 (lower is better)
Translates to: GCSFPSGLNIYK*SEVEFSTCPLS
Trigger: GGACAATGGACAGGTACTGAACTCCACTTCACTGCACTTATAAATATTCAGACCCGAGGGGAAGCTGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR CCA 72 bp CATGCCCCACACATTTATCCATGGACACATCCTACTTaGCAGTTGGGGACTGAGGACAAATCCAGGAGGAAT +
Preference number: 3 (lower is better)
Translates to: HAPHIYPWTHPT*QLGTEDKSRRN
Trigger: ATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR CCA 72 bp ACGTGGTACTTTAGTCATGCCCCACACATTTATCCATaGACACATCCTACTTGGCAGTTGGGGACTGAGGAC +
Preference number: 3 (lower is better)
Translates to: TWYFSHAPHIYP*THPTWQLGTED
Trigger: GTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGGCATGACTAAAGTACCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR CAA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGCATCTCTGTGACTGCTaGCGACAAGCACATAGGGCA +
Preference number: 3 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLHLCDC*RQAHRA
Trigger: TGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATG...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CAA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCCTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAAC +
Preference number: 3 (lower is better)
Translates to: IGLISVTACDKHIGQLITLSCRS*AVSCYN
Trigger: GTTATAACAAGAGACAGCCAAGGACCTACAAGACAG...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR-3UTR CAA 90 bp CATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGCCAATCTGGGAACATTaGCTTTCATCCACTTTTTCG +
Preference number: 3 (lower is better)
Translates to: HGHILLGSWGLRTNPGGMPIWEH*LSSTFS
Trigger: CGAAAAAGTGGATGAAAGCAAATGTTCCCAGATTGG...CATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR CAA 90 bp ATGTCCTTGGCACTGCGAACAGAGATAAGTCCTGGCCCTCAAGGAGCTCACAGTATAAATATAATGTATTaGGAGTTTGCAAAGGGGGCC +
Preference number: 3 (lower is better)
Translates to: MSLALRTEISPGPQGAHSINIMY*EFAKGA
Trigger: GGCCCCCTTTGCAAACTCCAAATACATTATATTTAT...ACTGTGAGCTCCTTGAGGGCCAGGACTTATCTCTGTTCGCAGTGCCAAGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR TCA 72 bp GTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGTTCTAAGTCTTATTTT +
Preference number: 3 (lower is better)
Translates to: VGSRLSRAESTR*RANLYSSKSYF
Trigger: AAAATAAGACTTAGAACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR CCA 72 bp TCACCCGCTGGTGGAGGTGTATCAATGTACTATGTATaGCTAATAACTGGGCCCATCTGGAAAGACAAGCAA +
Preference number: 3 (lower is better)
Translates to: SPAGGGVSMYYV*LITGPIWKDKQ
Trigger: TTGCTTGTCTTTCCAGATGGGCCCAGTTATTAGCCATACATAGTACATTGATACACCTCCACCAGCGGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR CAA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAAC +
Preference number: 3 (lower is better)
Translates to: EYQVIGLISVTACDKHIGLSCRS*AVSCYN
Trigger: GTTATAACAAGAGACAGCCAAGGACCTACAAGACAG...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR TCA 72 bp CTTCTTGGCAGAGCACATAGAAATGTTGGACAGGACTaGGCCCGGTTCCAGATCAAATCAAACTTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: LLGRAHRNVGQD*ARFQIKSNFSA
Trigger: TGCAGAAAAGTTTGATTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATTTCTATGTGCTCTGCCAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR GCA 72 bp CTAAGTCTTATTTTGGTTCTGGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTCCAATTCAGCGATGAC +
Preference number: 3 (lower is better)
Translates to: LSLILVLGTFQF*SKSALLQFSDD
Trigger: GTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCCCAGAACCAAAATAAGACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR GCA 72 bp CATCATTTGGGAGCTATAAGGTCAAAGTGGCCAGAATaGAACTGCGCTGTTACACTGTGCAAAATCAAGTCA +
Preference number: 3 (lower is better)
Translates to: HHLGAIRSKWPE*NCAVTLCKIKS
Trigger: TGACTTGATTTTGCACAGTGTAACAGCGCAGTTGCATTCTGGCCACTTTGACCTTATAGCTCCCAAATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR GCA 72 bp TTCTGGGCACATTTCAGTTCTGCTCCAAGTCCGCTTTaGTCCAATTCAGCGATGACAGACATATATTTGAAC +
Preference number: 3 (lower is better)
Translates to: FWAHFSSAPSPL*SNSAMTDIYLN
Trigger: GTTCAAATATATGTCTGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR CCA 72 bp CACACATTTATCCATGGACACATCCTACTTGGCAGTTaGGGACTGAGGACAAATCCAGGAGGAATGATTAAA +
Preference number: 3 (lower is better)
Translates to: HTFIHGHILLGS*GLRTNPGGMIK
Trigger: TTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR-3UTR CAA 90 bp CAGTTCTGCTCCAAGTCCGCTTTGCTCCAATTCAGCGATGACAGACATATATTTCGTAGACTGTATCTTTaGCTGCAAAATATTGCTGCC +
Preference number: 3 (lower is better)
Translates to: QFCSKSALLQFSDDRHIFRRLYL*LQNIAA
Trigger: GGCAGCAATATTTTGCAGCAAAAGATACAGTCTACG...AAATATATGTCTGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
3UTR-3UTR CAA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGCTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAAC +
Preference number: 3 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVLSCRS*AVSCYN
Trigger: GTTATAACAAGAGACAGCCAAGGACCTACAAGACAG...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR TCA 72 bp GAGATAATTATCAGAATGTTCAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCTCATCTCTGTGACTGC +
Preference number: 3 (lower is better)
Translates to: EIIIRMFRYLCS*ISSNRAHLCDC
Trigger: GCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTCTGATAATTATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
3UTR TCA 72 bp AACAGTATAGAGCTAATGAATAGCAACACTAACATATaGACCCAGATTCACTTAACTCTAAAGCCTGTCCAC +
Preference number: 3 (lower is better)
Translates to: NSIELMNSNTNI*TQIHLTLKPVH
Trigger: GTGGACAGGCTTTAGAGTTAAGTGAATCTGGGTTCATATGTTAGTGTTGCTATTCATTAGCTCTATACTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAGCGCAGCTGCGCGGGTaGCACGAGCCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQAQLRG*HEPQAQ
Trigger: CTGGGCCTGGGGCTCGTGTCACCCGCGCAGCTGCGC...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAGGGAAGACGCGCAGCTaGGCGGGTGACACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPGKTRS*AGDTSP
Trigger: GGGGCTCGTGTCACCCGCGCAGCTGCGCGTCTTCCC...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGCGCAGCTGCGCGGGTaGCACGAGCCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNAQLRG*HEPQAQ
Trigger: CTGGGCCTGGGGCTCGTGTCACCCGCGCAGCTGCGC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACACGAGCCGGGGCGCACTaGGAAGACGCGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTRAGAH*EDAQLR
Trigger: GCGCAGCTGCGCGTCTTCCCAGTGCGCCCCGGCTCG...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp CAGGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTAATCAGCTGGCTGGCTaGAGCTTCCCCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QASAAHTWITPYSPWRWPNQLAG*SFPSGL
Trigger: CAGACCCGAGGGGAAGCTGCAGCCAGCCAGCTGATT...AGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR CCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCCGAGCCGGGGCGCACTaGGAAGACGCGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITRAGAH*EDAQLR
Trigger: GCGCAGCTGCGCGTCTTCCCAGTGCGCCCCGGCTCG...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp CACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAGCGCAGCTGCGCGGGTaGCACGAGCCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HILLGSWGLRTNPGGMIKAQLRG*HEPQAQ
Trigger: CTGGGCCTGGGGCTCGTGTCACCCGCGCAGCTGCGC...TTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCATCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPSPCLE*PTGCFR
Trigger: TCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGA...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTTCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GFCSPHLDYSIFSLALASSPCLE*PTGCFR
Trigger: TCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGA...AGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR GCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTSPCLE*PTGCFR
Trigger: TCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGA...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAAATCAGCTGGCTGGCTaGAGCTTCCCCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQNQLAG*SFPSGL
Trigger: CAGACCCGAGGGGAAGCTGCAGCCAGCCAGCTGATT...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTAATCAGCTGGCTGGCTaGAGCTTCCCCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCNQLAG*SFPSGL
Trigger: CAGACCCGAGGGGAAGCTGCAGCCAGCCAGCTGATT...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCCGAGCCGGGGCGCACTaGGAAGACGCGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVRAGAH*EDAQLR
Trigger: GCGCAGCTGCGCGTCTTCCCAGTGCGCCCCGGCTCG...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCATTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGCGCAGCTGCGCGGGTaGCACGAGCCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACAQLRG*HEPQAQ
Trigger: CTGGGCCTGGGGCTCGTGTCACCCGCGCAGCTGCGC...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCGGGAAGACGCGCAGCTaGGCGGGTGACACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVGKTRS*AGDTSP
Trigger: GGGGCTCGTGTCACCCGCGCAGCTGCGCGTCTTCCC...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTCAGCTGGGTCTGACCTaGGCAGCAGCTGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGQLGLT*AAAGSC
Trigger: ACAAGATCCAGCTGCTGCGCAGGTCAGACCCAGCTG...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTTCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGSPCLE*PTGCFR
Trigger: TCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGA...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGGTCGTAGAAAGGGTTaGCCTGGAGCTCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTGRRKG*PGARPR
Trigger: CCGAGGCCGAGCTCCAGGCCAACCCTTTCTACGACC...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTTTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTACTCCATATTCTCCCTaGCGCTGGCCTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: GFCSPHLDYSIFSLALASTPYSP*RWPLLH
Trigger: GTGTAGGAGAGGCCAGCGCCAGGGAGAATATGGAGT...AGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR TCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPAESTR*RANLYS
Trigger: ACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGC...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGGGGAAGACGCGCAGCTaGGCGGGTGACACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGGKTRS*AGDTSP
Trigger: GGGGCTCGTGTCACCCGCGCAGCTGCGCGTCTTCCC...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: GFCSPHLDYSIFSLALASASEIH*VSPGGT
Trigger: AGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGC...AGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR GCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTASEIH*VSPGGT
Trigger: AGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGC...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTGAATGCCCCACTGGCTaGTTCCGAAATTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: GFCSPHLDYSIFSLALASECPTG*FRNSLR
Trigger: ACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTC...AGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR GCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCGAATGCCCCACTGGCTaGTTCCGAAATTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTECPTG*FRNSLR
Trigger: ACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTC...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAAATCAGCTGGCTGGCTaGAGCTTCCCCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTNQLAG*SFPSGL
Trigger: CAGACCCGAGGGGAAGCTGCAGCCAGCCAGCTGATT...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCCGAGCCGGGGCGCACTaGGAAGACGCGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACRAGAH*EDAQLR
Trigger: GCGCAGCTGCGCGTCTTCCCAGTGCGCCCCGGCTCG...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCCCTGGAATGCCCCACTaGCTGCTTCCGAAATTCACT +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTPGMPH*LLPKFT
Trigger: AGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGG...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp CAGGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCCTGGAATGCCCCACTaGCTGCTTCCGAAATTCACT +
Preference number: 4 (lower is better)
Translates to: QASAAHTWITPYSPWRWPPGMPH*LLPKFT
Trigger: AGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGG...AGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR CCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAATAAAATCAGCTGGCTaGCTGCAGCTTCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQIKSAG*LQLPLG
Trigger: CCCGAGGGGAAGCTGCAGCCAGCCAGCTGATTTTAT...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTTATTCTCCCTGGCGCTaGCCTCTCCTACACCAGTTT +
Preference number: 4 (lower is better)
Translates to: GFCSPHLDYSIFSLALASYSPWR*PLLHQF
Trigger: AAACTGGTGTAGGAGAGGCCAGCGCCAGGGAGAATA...AGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR TCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCAESTR*RANLYS
Trigger: ACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAAATGTTGGACAGGACTaGGCCCGGTTCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPNVGQD*ARFQIK
Trigger: TTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATT...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCATGCTTTTGTTCAGCTaGCTGGTGCCTGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTMLLFS*LVPGKD
Trigger: ATCCTTCCCAGGCACCAGTCAGCTGAACAAAAGCAT...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGGGAAGACGCGCAGCTaGGCGGGTGACACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACGKTRS*AGDTSP
Trigger: GGGGCTCGTGTCACCCGCGCAGCTGCGCGTCTTCCC...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGASEIH*VSPGGT
Trigger: AGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGC...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCASEIH*VSPGGT
Trigger: AGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCGAACTTGGTTGGCGATaGACTGTGCCTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTELGWR*TVPQQH
Trigger: ATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTC...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp CAGGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QASAAHTWITPYSPWRWPGTFQF*SKSALL
Trigger: GAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCC...AGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTAATCAGCTGGCTGGCTaGAGCTTCCCCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVNQLAG*SFPSGL
Trigger: CAGACCCGAGGGGAAGCTGCAGCCAGCCAGCTGATT...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCATGTTCAGCTGACTGGTaGCTGGGAAGGATTAAAGCC +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPCSADW*LGRIKA
Trigger: GGCTTTAATCCTTCCCAGGCACCAGTCAGCTGAACA...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTTCAGCTGACTGGTaGCTGGGAAGGATTAAAGCC +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTCSADW*LGRIKA
Trigger: GGCTTTAATCCTTCCCAGGCACCAGTCAGCTGAACA...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACATTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTTGGGTTCAGAAGGCTaGTGTGTAACCACCGTCCTT +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTLGSEG*CVTTVL
Trigger: AAGGACGGTGGTTACACACCAGCCTTCTGAACCCAA...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTAATGTTGGACAGGACTaGGCCCGGTTCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCNVGQD*ARFQIK
Trigger: TTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATT...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAAATGTTGGACAGGACTaGGCCCGGTTCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQNVGQD*ARFQIK
Trigger: TTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATT...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACTCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNSPCLE*PTGCFR
Trigger: TCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGA...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGCTCCAAGTCCGCTTTaGTCCAATTCAGCGATGACA +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGAPSPL*SNSAMT
Trigger: TGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGC...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAGCTCCAAGTCCGCTTTaGTCCAATTCAGCGATGACA +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQAPSPL*SNSAMT
Trigger: TGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGC...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGCTCCAAGTCCGCTTTaGTCCAATTCAGCGATGACA +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCAPSPL*SNSAMT
Trigger: TGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQGTFQF*SKSALL
Trigger: GAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCC...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCGTFQF*SKSALL
Trigger: GAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCGTTGGCGATGCACTGTaGCTCAGCAACATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTVGDAL*LSNIQK
Trigger: TTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAAC...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAATGTTCAGCTGACTGGTaGCTGGGAAGGATTAAAGCC +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQCSADW*LGRIKA
Trigger: GGCTTTAATCCTTCCCAGGCACCAGTCAGCTGAACA...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp CAGGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCACCAGTTTGTTCTGTaGACCATCCTTCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QASAAHTWITPYSPWRWPHQFVL*TILLFH
Trigger: GTGGAACAGAAGGATGGTGCACAGAACAAACTGGTG...AGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR GCA 90 bp CAGGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTTAATTCAGGCTTCTaGAGCCCACACCTGGATTAC +
Preference number: 4 (lower is better)
Translates to: QASAAHTWITPYSPWRWPLNSGF*SPHLDY
Trigger: GTAATCCAGGTGTGGGCTGCAGAAGCCTGAATTAAG...AGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR GCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCACTTAATTCAGGCTTCTaGAGCCCACACCTGGATTAC +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPLNSGF*SPHLDY
Trigger: GTAATCCAGGTGTGGGCTGCAGAAGCCTGAATTAAG...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
CDS-3UTR TCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTAESTR*RANLYS
Trigger: ACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGC...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCGCTCATTATAAATGCTaGGCTCTTGAGTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTAHYKC*ALEFLR
Trigger: CCTCAGGAACTCAAGAGCTCAGCATTTATAATGAGC...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGAATGCCCCACTGGCTaGTTCCGAAATTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTECPTG*FRNSLR
Trigger: ACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTC...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAATCAAAGTGGCCAGAATaGAACTGCGCTGTTACACTG +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQSKWPE*NCAVTL
Trigger: CAGTGTAACAGCGCAGTTGCATTCTGGCCACTTTGA...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTTCAAAGTGGCCAGAATaGAACTGCGCTGTTACACTG +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGSKWPE*NCAVTL
Trigger: CAGTGTAACAGCGCAGTTGCATTCTGGCCACTTTGA...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGTTGGCGATGCACTGTaGCTCAGCAACATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCVGDAL*LSNIQK
Trigger: TTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAAC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGTTGGCGATGCACTGTaGCTCAGCAACATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGVGDAL*LSNIQK
Trigger: TTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAAC...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTCACCAGTTTGTTCTGTaGACCATCCTTCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGHQFVL*TILLFH
Trigger: GTGGAACAGAAGGATGGTGCACAGAACAAACTGGTG...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
CDS-3UTR GCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACACCAGTTTGTTCTGTaGACCATCCTTCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQHQFVL*TILLFH
Trigger: GTGGAACAGAAGGATGGTGCACAGAACAAACTGGTG...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
CDS-3UTR CCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACACCTGGAATGCCCCACTaGCTGCTTCCGAAATTCACT +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTPGMPH*LLPKFT
Trigger: AGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGG...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCTTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTATAAAATCAGCTGGCTaGCTGCAGCTTCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVIKSAG*LQLPLG
Trigger: CCCGAGGGGAAGCTGCAGCCAGCCAGCTGATTTTAT...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAATGCTTTTGTTCAGCTaGCTGGTGCCTGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTMLLFS*LVPGKD
Trigger: ATCCTTCCCAGGCACCAGTCAGCTGAACAAAAGCAT...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTATACCTGAAATTTGCTaGTACCCCAAGCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCIPEIC*YPKPAT
Trigger: AGTAGCTGGCTTGGGGTATCAGCAAATTTCAGGTAT...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGAATGCCCCACTGGCTaGTTCCGAAATTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNECPTG*FRNSLR
Trigger: ACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTGAATGCCCCACTGGCTaGTTCCGAAATTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVECPTG*FRNSLR
Trigger: ACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTC...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGCTCCAAGTCCGCTTTaGTCCAATTCAGCGATGACA +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTAPSPL*SNSAMT
Trigger: TGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGC...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp ATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATCAGCTGGCTGGCTaGAGCTTCCCCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ILLGSWGLRTNPGGMIKTNQLAG*SFPSGL
Trigger: CAGACCCGAGGGGAAGCTGCAGCCAGCCAGCTGATT...CGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACCCTGGAATGCCCCACTaGCTGCTTCCGAAATTCACT +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNPGMPH*LLPKFT
Trigger: AGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGG...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTCCTGGAATGCCCCACTaGCTGCTTCCGAAATTCACT +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVPGMPH*LLPKFT
Trigger: AGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGG...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACACTCAGCAACATTTGTTaGACAGGACTGAGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTLSNIC*TGLSPV
Trigger: AACCGGGCTCAGTCCTGTCCAACAAATGTTGCTGAG...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR CCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp CATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HGHILLGSWGLRTNPGGMRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...CATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp CTGAACTTGGTTGGCGATGCACTGTGCCTCAGCAACATTCAGAAATGTGGAATCTTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 4 (lower is better)
Translates to: LNLVGDALCLSNIQKCGIFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...GATTCCACATTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR CCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCATGTCTTGTAGGTCCTTaGCTGTCTCTTGTTATAACC +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPCLVGP*LSLVIT
Trigger: GGTTATAACAAGAGACAGCCAAGGACCTACAAGACA...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCATAAAATCAGCTGGCTaGCTGCAGCTTCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITIKSAG*LQLPLG
Trigger: CCCGAGGGGAAGCTGCAGCCAGCCAGCTGATTTTAT...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACACAGCTGACTGGTGCCTaGGAAGGATTAAAGCCCATA +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTQLTGA*EGLKPI
Trigger: TATGGGCTTTAATCCTTCCCAGGCACCAGTCAGCTG...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGGGTGCCACAAACTATaGTTTAATAGTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCGCHKL*FNSMQA
Trigger: GGCCTGCATACTATTAAACCATAGTTTGTGGCACCC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACTTTGTTGGACAGGACTaGGCCCGGTTCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNFVGQD*ARFQIK
Trigger: TTTGATCTGGAACCGGGCTCAGTCCTGTCCAACAAA...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR TCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTATGCTTTTGTTCAGCTaGCTGGTGCCTGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVMLLFS*LVPGKD
Trigger: ATCCTTCCCAGGCACCAGTCAGCTGAACAAAAGCAT...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTGGCAGTTGGGGACTaGGGACAAATCCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GSWGLRTNPGGMIKTNGHLAVGD*GQIQEE
Trigger: TTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAA...GTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR GCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCGAATGCCCCACTGGCTaGTTCCGAAATTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITECPTG*FRNSLR
Trigger: ACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTC...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACTCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHSPCLE*PTGCFR
Trigger: TCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGA...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGTTGGCGATGCACTGTaGCTCAGCAACATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNVGDAL*LSNICW
Trigger: CCAACAAATGTTGCTGAGGCACAGTGCATCGCCAAC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTGTTGGCGATGCACTGTaGCTCAGCAACATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVVGDAL*LSNICW
Trigger: CCAACAAATGTTGCTGAGGCACAGTGCATCGCCAAC...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTGAACTTGGTTGGCGATaGACTGTGCCTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVELGWR*TVPQQH
Trigger: ATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTC...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp CATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGGAACTTGGTTGGCGATaGACTGTGCCTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: HGHILLGSWGLRTNPGGMELGWR*TVPQQH
Trigger: ATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTC...CATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTGCTCCAAGTCCGCTTTaGTCCAATTCAGCGATGACA +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVAPSPL*SNSAMT
Trigger: TGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGC...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGCTCCAAGTCCGCTTTaGTCCAATTCAGCGATGACA +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNAPSPL*SNSAMT
Trigger: TGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNGTFQF*SKSALL
Trigger: GAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTTGCGCTGTTACACTGTaGAAAATCAAGTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGCAVTL*KIKSTV
Trigger: GACAGTTGACTTGATTTTGCACAGTGTAACAGCGCA...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACTGTTCAGCTGACTGGTaGCTGGGAAGGATTAAAGCC +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNCSADW*LGRIKA
Trigger: GGCTTTAATCCTTCCCAGGCACCAGTCAGCTGAACA...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACCTCAGCAACATTTGTTaGACAGGACTGAGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNLSNIC*TGLSPV
Trigger: AACCGGGCTCAGTCCTGTCCAACAAATGTTGCTGAG...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR CCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGTTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGTTCCTGAGGAGGGGGTaGGCTCTAGACTATCGAGGG +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGFLRRG*ALDYRG
Trigger: CCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAA...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCACTCCATATTCTCCCTaGCGCTGGCCTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVTPYSP*RWPLLH
Trigger: GTGTAGGAGAGGCCAGCGCCAGGGAGAATATGGAGT...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
3UTR CAA 72 bp GGTCTCTTTCCGATCAGTAGCGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGCCTCAGCAACATTCAG +
Preference number: 4 (lower is better)
Translates to: GLFPISSVEELN*VGDALCLSNIQ
Trigger: CTGAATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTACGCTACTGATCGGAAAGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR TCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGCTCATTATAAATGCTaGGCTCTTGAGTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTAHYKC*ALEFLR
Trigger: CCTCAGGAACTCAAGAGCTCAGCATTTATAATGAGC...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQRYLCS*ISSNRA
Trigger: AGCCCTATTACTTGATATTCAGGAACAAAGGTACCT...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp CTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCTTGGCAGTTGGGGACTaGGGACAAATCCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LGSWGLRTNPGGMIKTNGLAVGD*GQIQEE
Trigger: TTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAA...GCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR TCA 90 bp TATTTGGAGTTTGCAAAGGGGGCCACTATGGGAGACAAAGAACAGAGGAACCTAGGGGTGGTGTACGGTTaGGGCCTGAGAATCTGCATT +
Preference number: 4 (lower is better)
Translates to: YLEFAKGATMGDKEQRNLGVVYG*GLRICI
Trigger: AATGCAGATTCTCAGGCCTCAACCGTACACCACCCC...TAGGTTCCTCTGTTCTTTGTCTCCCATAGTGGCCCCCTTTGCAAACTCCAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVASEIH*VSPGGT
Trigger: AGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGC...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCTCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACSPCLE*PTGCFR
Trigger: TCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGA...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTGTAGACTGTATCTTTTaGTGCAAAATATTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GFCSPHLDYSIFSLALASVDCIF*CKILLP
Trigger: TGGCAGCAATATTTTGCAGCAAAAGATACAGTCTAC...AGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR GCA 90 bp GGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTCAAATCAAACTTTTCTaGAGGAATAACTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: GFCSPHLDYSIFSLALASQIKLF*RNNCVD
Trigger: GTCTACGCAGTTATTCCTGCAGAAAAGTTTGATTTG...AGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR GCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCCAAATCAAACTTTTCTaGAGGAATAACTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTQIKLF*RNNCVD
Trigger: GTCTACGCAGTTATTCCTGCAGAAAAGTTTGATTTG...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGACACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: GHILLGSWGLRTNPGGMIAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...AATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTTCAAAGTGGCCAGAATaGAACTGCGCTGTTACACTG +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVSKWPE*NCAVTL
Trigger: CAGTGTAACAGCGCAGTTGCATTCTGGCCACTTTGA...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGTTGGCGATGCACTGTaGCTCAGCAACATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNVGDAL*LSNIQK
Trigger: TTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAAC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTCCTGGAATGCCCCACTaGCTGCTTCCGAAATTCACT +
Preference number: 4 (lower is better)
Translates to: VIGLISVTACDKHIGQLIPGMPH*LLPKFT
Trigger: AGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGG...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAAAATCAGCTGGCTaGCTGCAGCTTCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHIKSAG*LQLPLG
Trigger: CCCGAGGGGAAGCTGCAGCCAGCCAGCTGATTTTAT...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTATAAAATCAGCTGGCTaGCTGCAGCTTCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSIKSAG*LQLPLG
Trigger: CCCGAGGGGAAGCTGCAGCCAGCCAGCTGATTTTAT...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCCAGCTGACTGGTGCCTaGGAAGGATTAAAGCCCATA +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITQLTGA*EGLKPI
Trigger: TATGGGCTTTAATCCTTCCCAGGCACCAGTCAGCTG...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGGGTGCCACAAACTATaGTTTAATAGTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTGCHKL*FNSMQA
Trigger: GGCCTGCATACTATTAAACCATAGTTTGTGGCACCC...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTATTCTCCCTGGCGCTaGCCTCTCCTACACCAGTTT +
Preference number: 4 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVYSPWR*PLLHQF
Trigger: AAACTGGTGTAGGAGAGGCCAGCGCCAGGGAGAATA...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
CDS-3UTR CCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGACTCCATATTCTCCCTaGCGCTGGCCTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLTPYSP*RWPLLH
Trigger: GTGTAGGAGAGGCCAGCGCCAGGGAGAATATGGAGT...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
CDS-3UTR CCA 90 bp CCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACAATCCTACTTGGCAGTTaGGGACTGAGGACAAATCCA +
Preference number: 4 (lower is better)
Translates to: PHTFIHGHILLGSWGLRTILLGS*GLRTNP
Trigger: TGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGAT...TGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp AGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCCAATACTGGGGGCCTTaGGTTCAGAAGGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SWGLRTNPGGMIKTNGHFQYWGP*VQKAGV
Trigger: CACACCAGCCTTCTGAACCCAAGGCCCCCAGTATTG...GAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSAESTR*RANLYS
Trigger: ACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGC...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGAESTR*RANLYS
Trigger: ACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGC...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGAGTCAACTAGGTaGAGGGCCAACCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLAESTR*RANLYS
Trigger: ACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGC...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGCTCATTATAAATGCTaGGCTCTTGAGTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNAHYKC*ALEFLR
Trigger: CCTCAGGAACTCAAGAGCTCAGCATTTATAATGAGC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTAATGTTGGACAGGACTaGGCCCGGTTCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: VIGLISVTACDKHIGQLINVGQD*ARFQIK
Trigger: TTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATT...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTATGCTTTTGTTCAGCTaGCTGGTGCCTGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: VIGLISVTACDKHIGQLIMLLFS*LVPGKD
Trigger: ATCCTTCCCAGGCACCAGTCAGCTGAACAAAAGCAT...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTATACCTGAAATTTGCTaGTACCCCAAGCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVIPEIC*YPKPAT
Trigger: AGTAGCTGGCTTGGGGTATCAGCAAATTTCAGGTAT...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGGAATGCCCCACTGGCTaGTTCCGAAATTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGECPTG*FRNSLR
Trigger: ACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTC...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGTAGACTGTATCTTTTaGTGCAAAATATTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCVDCIF*CKILLP
Trigger: TGGCAGCAATATTTTGCAGCAAAAGATACAGTCTAC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTCAAATCAAACTTTTCTaGAGGAATAACTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGQIKLF*RNNCVD
Trigger: GTCTACGCAGTTATTCCTGCAGAAAAGTTTGATTTG...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: VIGLISVTACDKHIGQLIAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCTCAAAGTGGCCAGAATaGAACTGCGCTGTTACACTG +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITSKWPE*NCAVTL
Trigger: CAGTGTAACAGCGCAGTTGCATTCTGGCCACTTTGA...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCCTGAATATTTATAAGTaGAGTGAAGTGGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTLNIYK*SEVEFS
Trigger: ACTGAACTCCACTTCACTGCACTTATAAATATTCAG...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCACTGAATATTTATAAGTaGAGTGAAGTGGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPLNIYK*SEVEFS
Trigger: ACTGAACTCCACTTCACTGCACTTATAAATATTCAG...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACGTTGGCGATGCACTGTaGCTCAGCAACATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GSWGLRTNPGGMIKTNGHVGDAL*LSNIQK
Trigger: TTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAAC...GTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR GCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAAGGATGTTTGGCTTATaGTTTTGTTCAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTRMFGL*FCSADW
Trigger: CCAGTCAGCTGAACAAAAGCATAAGCCAAACATCCT...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp CATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGAATGTATTTGGAGTTTaGAAAGGGGGCCACTATGGG +
Preference number: 4 (lower is better)
Translates to: HGHILLGSWGLRTNPGGMNVFGV*KGGHYG
Trigger: CCCATAGTGGCCCCCTTTGCAAACTCCAAATACATT...CATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp ATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILLGSWGLRTNPGGMIKTRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...CGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCACCTGATGGGAATATCTaGTTATTCTACAGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPPDGNI*LFYSLN
Trigger: GTTTAAACTGTAGAATAACCAGATATTCCCATCAGG...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTTCCCCACATCCAATCTaGGAACATTTGCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVSPHPI*EHLLSS
Trigger: GGATGAAAGCAAATGTTCCCAGATTGGATGTGGGGA...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGTTTGTTGGACAGGACTaGGCCCGGTTCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGFVGQD*ARFQIK
Trigger: TTTGATCTGGAACCGGGCTCAGTCCTGTCCAACAAA...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR TCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCGCTCATTATAAATGCTaGGCTCTTGAGTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITAHYKC*ALEFLR
Trigger: CCTCAGGAACTCAAGAGCTCAGCATTTATAATGAGC...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTRYLCS*ISSNRA
Trigger: AGCCCTATTACTTGATATTCAGGAACAAAGGTACCT...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTAATGTTGGACAGGACTaGGCCCGGTTCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSNVGQD*ARFQIK
Trigger: TTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATT...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGATGCTTTTGTTCAGCTaGCTGGTGCCTGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLMLLFS*LVPGKD
Trigger: ATCCTTCCCAGGCACCAGTCAGCTGAACAAAAGCAT...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGGTCCTTTCCTATCACTaGGCTTGGAGCCACAACAGT +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGVLSYH*AWSHNS
Trigger: ACTGTTGTGGCTCCAAGCTCAGTGATAGGAAAGGAC...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp TGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACATGGTAAAGGCAGCTaGCAACAATACTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: WGLRTNPGGMIKTNGHFLHGKGS*QQYWGP
Trigger: AGGCCCCCAGTATTGTTGTCAGCTGCCTTTACCATG...TAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCCGCAGCAGAATCACTTaGACCAGGGAGGTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACRSRIT*TREVEV
Trigger: AACCTCTACCTCCCTGGTTCAAGTGATTCTGCTGCG...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACASEIH*VSPGGT
Trigger: AGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGC...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGTGAAGGGCCAACCTGTACAGTTCTAAGTCTTATTTTGGTTCTGGGCACATTTGAATGCCCCACTGGCTaGTTCCGAAATTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: GEGPTCTVLSLILVLGTFECPTG*FRNSLR
Trigger: ACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTC...AAATGTGCCCAGAACCAAAATAAGACTTAGAACTGTACAGGTTGGCCCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR GCA 90 bp GGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCGAATGCCCCACTGGCTaGTTCCGAAATTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: GLRTNPGGMIKTNGHFLLECPTG*FRNSLR
Trigger: ACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTC...GAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGAACTTGGTTGGCGATaGACTGTGCCTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLELGWR*TVPQQH
Trigger: ATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTC...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGGAACTTGGTTGGCGATaGACTGTGCCTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGELGWR*TVPQQH
Trigger: ATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTC...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLGTFQF*SKSALL
Trigger: GAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCC...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGGTFQF*SKSALL
Trigger: GAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCC...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VIGLISVTACDKHIGQLIISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTCATGCCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGTGCGCTGTTACACTGTaGAAAATCAAGTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: VMPHTFIHGHILLGSWGLCAVTL*KIKSTV
Trigger: GACAGTTGACTTGATTTTGCACAGTGTAACAGCGCA...CAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGGCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTGAATATTTATAAGTaGAGTGAAGTGGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQLNIYK*SEVEFS
Trigger: ACTGAACTCCACTTCACTGCACTTATAAATATTCAG...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAACCTAAATATCCTATAGTTAGCATCCACAGGAAAGAAAGACCTGGCAATGTAAATCAGCTGGCTGGCTaGAGCTTCCCCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: EPKYPIVSIHRKERPGNVNQLAG*SFPSGL
Trigger: CAGACCCGAGGGGAAGCTGCAGCCAGCCAGCTGATT...TACATTGCCAGGTCTTTCTTTCCTGTGGATGCTAACTATAGGATATTTAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTAGGATGTTTGGCTTATaGTTTTGTTCAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVRMFGL*FCSADW
Trigger: CCAGTCAGCTGAACAAAAGCATAAGCCAAACATCCT...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACAGGATGTTTGGCTTATaGTTTTGTTCAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNRMFGL*FCSADW
Trigger: CCAGTCAGCTGAACAAAAGCATAAGCCAAACATCCT...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCCTTAATTCAGGCTTCTaGAGCCCACACCTGGATTAC +
Preference number: 4 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVLNSGF*SPHLDY
Trigger: GTAATCCAGGTGTGGGCTGCAGAAGCCTGAATTAAG...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
CDS-3UTR GCA 90 bp CTCTCTCAATACATAGACTCAAAGGTGCAACAAAATAGACACGGCTCAGAGAATCAGGGAGGTAGAGGTTaGAGCGAGCTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: LSQYIDSKVQQNRHGSENQGGRG*SELRSR
Trigger: GCGTGATCTCAGCTCGCTGCAACCTCTACCTCCCTG...ATTCTCTGAGCCGTGTCTATTTTGTTGCACCTTTGAGTCTATGTATTGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACCAGCTGACTGGTGCCTaGGAAGGATTAAAGCCCATA +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHQLTGA*EGLKPI
Trigger: TATGGGCTTTAATCCTTCCCAGGCACCAGTCAGCTG...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACCTGATGGGAATATCTaGTTATTCTACAGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQPDGNI*LFYSLN
Trigger: GTTTAAACTGTAGAATAACCAGATATTCCCATCAGG...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCTATTCTCCCTGGCGCTaGCCTCTCCTACACCAGTTT +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACYSPWR*PLLHQF
Trigger: AAACTGGTGTAGGAGAGGCCAGCGCCAGGGAGAATA...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
CDS-3UTR CCA 90 bp CTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCTTCCTCACCCGCTGGTaGAGGTGTATCAATGTACTA +
Preference number: 4 (lower is better)
Translates to: LGSWGLRTNPGGMIKTNGFLTRW*RCINVL
Trigger: TAGTACATTGATACACCTCCACCAGCGGGTGAGGAA...GCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CCA 90 bp CTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCATCCTACTTGGCAGTTaGGGACTGAGGACAAATCCA +
Preference number: 4 (lower is better)
Translates to: LGSWGLRTNPGGMIKTNGILLGS*GLRTNP
Trigger: TGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGAT...GCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTTGTATGGCTAATAACTaGGCCCATCTGGAAAGACAA +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVCMANN*AHLERQ
Trigger: TTGTCTTTCCAGATGGGCCCAGTTATTAGCCATACA...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCTGGACACATCCTACTTaGCAGTTGGGGACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACWTHPT*QLGTED
Trigger: GTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCA...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCCCACACATTTATCCATaGACACATCCTACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITPHIYP*THPTWQ
Trigger: CTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGG...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp AGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCAACAGAGATAAGTCCTaGCCCTCAAGGAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: SWGLRTNPGGMIKTNGHFNRDKS*PSRSSQ
Trigger: CTGTGAGCTCCTTGAGGGCCAGGACTTATCTCTGTT...GAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVRYLCS*ISSNRA
Trigger: AGCCCTATTACTTGATATTCAGGAACAAAGGTACCT...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCAATGTTGGACAGGACTaGGCCCGGTTCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: GLRTNPGGMIKTNGHFLLNVGQD*ARFQIK
Trigger: TTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATT...GAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTATACCTGAAATTTGCTaGTACCCCAAGCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: VIGLISVTACDKHIGQLIIPEIC*YPKPAT
Trigger: AGTAGCTGGCTTGGGGTATCAGCAAATTTCAGGTAT...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp CTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCTTGGAGCCACAACAGTaGCACTACAAACGAAAGATG +
Preference number: 4 (lower is better)
Translates to: LGSWGLRTNPGGMIKTNGLEPQQ*HYKRKM
Trigger: CATCTTTCGTTTGTAGTGTCACTGTTGTGGCTCCAA...GCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp ACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCCTTTTTCCAAGGTGGTGGATCACTTaGGGCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: TNPGGMIKTNGHFLLLFPRWWIT*GQEFET
Trigger: GGTCTCGAACTCCTGGCCTCAAGTGATCCACCACCT...TGGAAAAAGGAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp ATGTCCTTGGCACTGCGAACAGAGATAAGTCCTGGCCCTCAAGGAGCTCACAGTGTAGACTGTATCTTTTaGTGCAAAATATTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MSLALRTEISPGPQGAHSVDCIF*CKILLP
Trigger: TGGCAGCAATATTTTGCAGCAAAAGATACAGTCTAC...ACTGTGAGCTCCTTGAGGGCCAGGACTTATCTCTGTTCGCAGTGCCAAGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACACAAATCAAACTTTTCTaGAGGAATAACTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTQIKLF*RNNCVD
Trigger: GTCTACGCAGTTATTCCTGCAGAAAAGTTTGATTTG...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCGAACTTGGTTGGCGATaGACTGTGCCTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: GLRTNPGGMIKTNGHFLLELGWR*TVPQQH
Trigger: ATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTC...GAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGCTCCAAGTCCGCTTTaGTCCAATTCAGCGATGACA +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACAPSPL*SNSAMT
Trigger: TGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGC...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACGTFQF*SKSALL
Trigger: GAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCC...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp TGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTAGGCACATTTCAGTTCTaGTCCAAGTCCGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: WGLRTNPGGMIKTNGHFLGTFQF*SKSALL
Trigger: GAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCC...TAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACTCAAAGTGGCCAGAATaGAACTGCGCTGTTACACTG +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHSKWPE*NCAVTL
Trigger: CAGTGTAACAGCGCAGTTGCATTCTGGCCACTTTGA...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp ATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGTCAAAGTGGCCAGAATaGAACTGCGCTGTTACACTG +
Preference number: 4 (lower is better)
Translates to: ILLGSWGLRTNPGGMIKTSKWPE*NCAVTL
Trigger: CAGTGTAACAGCGCAGTTGCATTCTGGCCACTTTGA...CGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp CACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAGTTGGCGATGCACTGTaGCTCAGCAACATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: HILLGSWGLRTNPGGMIKVGDAL*LSNIQK
Trigger: TTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAAC...TTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGGTTGGCGATGCACTGTaGCTCAGCAACATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGVGDAL*LSNIQK
Trigger: TTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAAC...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCTGTTCAGCTGACTGGTaGCTGGGAAGGATTAAAGCC +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACCSADW*LGRIKA
Trigger: GGCTTTAATCCTTCCCAGGCACCAGTCAGCTGAACA...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTCATGCCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGCACACACACACAAACTaGGAATACTGCTTAAATTCC +
Preference number: 4 (lower is better)
Translates to: VMPHTFIHGHILLGSWGLHTHTN*EYCLNS
Trigger: GGAATTTAAGCAGTATTCGCAGTTTGTGTGTGTGTG...CAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGGCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp GGAATCCATTTCTGCAGTCATCAGCACTATGCCCTTTTCTTCCTTAAGTTCAGGCAGCTGACTGGTGCCTaGGAAGGATTAAAGCCCATA +
Preference number: 4 (lower is better)
Translates to: GIHFCSHQHYALFFLKFRQLTGA*EGLKPI
Trigger: TATGGGCTTTAATCCTTCCCAGGCACCAGTCAGCTG...CCTGAACTTAAGGAAGAAAAGGGCATAGTGCTGATGACTGCAGAAATGGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR CCA 90 bp CACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAACATTTCCTCACCCGCTaGTGGAGGTGTATCAATGTA +
Preference number: 4 (lower is better)
Translates to: HILLGSWGLRTNPGGMIKHFLTR*WRCINV
Trigger: TACATTGATACACCTCCACCAGCGGGTGAGGAAATG...TTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
3UTR CAA 72 bp GGTGAAGGGCCAACCTGTACAGTTCTAAGTCTTATTTaGGTTCTGGGCACATTTCAGTTCTGCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GEGPTCTVLSLI*VLGTFQFCSKS
Trigger: GGACTTGGAGCAGAACTGAAATGTGCCCAGAACCAAAATAAGACTTAGAACTGTACAGGTTGGCCCTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR TCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGATACCTGAAATTTGCTaGTACCCCAAGCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGIPEIC*YPKPAT
Trigger: AGTAGCTGGCTTGGGGTATCAGCAAATTTCAGGTAT...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVASEIH*VSPGGT
Trigger: AGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGC...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTGTAGACTGTATCTTTTaGTGCAAAATATTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVVDCIF*CKILLP
Trigger: TGGCAGCAATATTTTGCAGCAAAAGATACAGTCTAC...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGTAGACTGTATCTTTTaGTGCAAAATATTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLISVTACDKHIGQLITNVDCIF*CKILLP
Trigger: TGGCAGCAATATTTTGCAGCAAAAGATACAGTCTAC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTCAAATCAAACTTTTCTaGAGGAATAACTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVQIKLF*RNNCVD
Trigger: GTCTACGCAGTTATTCCTGCAGAAAAGTTTGATTTG...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GGAATCCATTTCTGCAGTCATCAGCACTATGCCCTTTTCTTCCTTAAGTTCAGGGTTGGCGATGCACTGTaGCTCAGCAACATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GIHFCSHQHYALFFLKFRVGDAL*LSNIQK
Trigger: TTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAAC...CCTGAACTTAAGGAAGAAAAGGGCATAGTGCTGATGACTGCAGAAATGGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR CCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGAGAGCTGAACTTGGTTaGCGATGCACTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVRAELG*RCTVPQ
Trigger: CTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCT...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTTGTCTTGTAGGTCCTTaGCTGTCTCTTGTTATAACC +
Preference number: 4 (lower is better)
Translates to: VIGLISVTACDKHIGQLICLVGP*LSLVIT
Trigger: GGTTATAACAAGAGACAGCCAAGGACCTACAAGACA...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTGTCTTGTAGGTCCTTaGCTGTCTCTTGTTATAACC +
Preference number: 4 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVCLVGP*LSLVIT
Trigger: GGTTATAACAAGAGACAGCCAAGGACCTACAAGACA...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp ACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCCTTTTTCCAATAAAATCAGCTGGCTaGCTGCAGCTTCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TNPGGMIKTNGHFLLLFPIKSAG*LQLPLG
Trigger: CCCGAGGGGAAGCTGCAGCCAGCCAGCTGATTTTAT...TGGAAAAAGGAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CCA 90 bp AGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCCTTTTTATAAAATCAGCTGGCTaGCTGCAGCTTCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RTNPGGMIKTNGHFLLLFIKSAG*LQLPLG
Trigger: CCCGAGGGGAAGCTGCAGCCAGCCAGCTGATTTTAT...AAAAAGGAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGGGTGCCACAAACTATaGTTTAATAGTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLGCHKL*FNSMQA
Trigger: GGCCTGCATACTATTAAACCATAGTTTGTGGCACCC...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTCAATGTACTATGTATaGCTAATAACTGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: GSWGLRTNPGGMIKTNGHSMYYV*LITGPI
Trigger: GATGGGCCCAGTTATTAGCCATACATAGTACATTGA...GTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CCA 90 bp CTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATCATTTCCTCACCCGCTaGTGGAGGTGTATCAATGTA +
Preference number: 4 (lower is better)
Translates to: LLGSWGLRTNPGGMIKTNHFLTR*WRCINV
Trigger: TACATTGATACACCTCCACCAGCGGGTGAGGAAATG...ATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGGCTCATCTCTGTGACTaGTTGCGACAAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVAHLCD*LRQAHR
Trigger: CCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGC...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACTGCGCTGTTACACTGTaGAAAATCAAGTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHCAVTL*KIKSTV
Trigger: GACAGTTGACTTGATTTTGCACAGTGTAACAGCGCA...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGAGGATGTTTGGCTTATaGTTTTGTTCAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLRMFGL*FCSADW
Trigger: CCAGTCAGCTGAACAAAAGCATAAGCCAAACATCCT...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCTATGGTTTAATAGTATaGAGGCCCTGTACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: IGLISVTACDKHIGQLITYGLIV*RPCTCL
Trigger: TAAACAGGTACAGGGCCTGCATACTATTAAACCATA...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGCAGCTGACTGGTGCCTaGGAAGGATTAAAGCCCATA +
Preference number: 4 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVQLTGA*EGLKPI
Trigger: TATGGGCTTTAATCCTTCCCAGGCACCAGTCAGCTG...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTCCTGATGGGAATATCTaGTTATTCTACAGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVPDGNI*LFYSLN
Trigger: GTTTAAACTGTAGAATAACCAGATATTCCCATCAGG...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp CCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACAGATGTCAAAAATTCTTaGGACCCAAAACATTCAGAA +
Preference number: 4 (lower is better)
Translates to: PHTFIHGHILLGSWGLRTDVKNS*DPKHSE
Trigger: TTCTGAATGTTTTGGGTCCCAAGAATTTTTGACATC...TGTCCTCAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR CAA 72 bp GTTCTGGGCACATTTCAGTTCTGCTCCAAGTCCGCTTaGCTCCAATTCAGCGATGACAGACATATATTTGAA +
Preference number: 4 (lower is better)
Translates to: VLGTFQFCSKSA*LQFSDDRHIFE
Trigger: TTCAAATATATGTCTGTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCAGAACTGAAATGTGCCCAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR TCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGAGGTACCTTTGTTCCTaGATATCAAGTAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGRYLCS*ISSNRA
Trigger: AGCCCTATTACTTGATATTCAGGAACAAAGGTACCT...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp AATTCAGCGATGACAGACATATATTTGAACTCATTTGGTCTGAGGTTAAAGGTCGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: NSAMTDIYLNSFGLRLKVASEIH*VSPGGT
Trigger: AGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGC...GACCTTTAACCTCAGACCAAATGAGTTCAAATATATGTCTGTCATCGCTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR GCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCTGCGCTGTTACACTGTaGAAAATCAAGTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACCAVTL*KIKSTV
Trigger: GACAGTTGACTTGATTTTGCACAGTGTAACAGCGCA...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp ACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCCTTTTTCCACAGCTGACTGGTGCCTaGGAAGGATTAAAGCCCATA +
Preference number: 4 (lower is better)
Translates to: TNPGGMIKTNGHFLLLFPQLTGA*EGLKPI
Trigger: TATGGGCTTTAATCCTTCCCAGGCACCAGTCAGCTG...TGGAAAAAGGAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp AGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCCTTTTTCAAAGGGGGCCACTATaGGAGACAAAGAACAGAGGA +
Preference number: 4 (lower is better)
Translates to: RTNPGGMIKTNGHFLLLFQRGPL*ETKNRG
Trigger: TCCTCTGTTCTTTGTCTCCCATAGTGGCCCCCTTTG...AAAAAGGAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTCTCAATGTTAAAGATTaGACTGAGAGTCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSLNVKD*TESLVL
Trigger: AAGGACAAGACTCTCAGTTCAATCTTTAACATTGAG...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGGCTCATTATAAATGCTaGGCTCTTGAGTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVAHYKC*ALEFLR
Trigger: CCTCAGGAACTCAAGAGCTCAGCATTTATAATGAGC...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACGTAGACTGTATCTTTTaGTGCAAAATATTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHVDCIF*CKILLP
Trigger: TGGCAGCAATATTTTGCAGCAAAAGATACAGTCTAC...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGCAAATCAAACTTTTCTaGAGGAATAACTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLQIKLF*RNNCVD
Trigger: GTCTACGCAGTTATTCCTGCAGAAAAGTTTGATTTG...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTCAAATCAAACTTTTCTaGAGGAATAACTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSQIKLF*RNNCVD
Trigger: GTCTACGCAGTTATTCCTGCAGAAAAGTTTGATTTG...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACCAAATCAAACTTTTCTaGAGGAATAACTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHQIKLF*RNNCVD
Trigger: GTCTACGCAGTTATTCCTGCAGAAAAGTTTGATTTG...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp ATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGCAAATCAAACTTTTCTaGAGGAATAACTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: ILLGSWGLRTNPGGMIKTQIKLF*RNNCVD
Trigger: GTCTACGCAGTTATTCCTGCAGAAAAGTTTGATTTG...CGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GAACCTAAATATCCTATAGTTAGCATCCACAGGAAAGAAAGACCTGGCAATGTAATCTCTGTGACTGCTTaGGACAAGCACATAGGGCAA +
Preference number: 4 (lower is better)
Translates to: EPKYPIVSIHRKERPGNVISVTA*DKHIGQ
Trigger: TTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGAT...TACATTGCCAGGTCTTTCTTTCCTGTGGATGCTAACTATAGGATATTTAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTTATGGTTTAATAGTATaGAGGCCCTGTACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSYGLIV*RPCTCL
Trigger: TAAACAGGTACAGGGCCTGCATACTATTAAACCATA...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACTATGGTTTAATAGTATaGAGGCCCTGTACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHYGLIV*RPCTCL
Trigger: TAAACAGGTACAGGGCCTGCATACTATTAAACCATA...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp TGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTAACAAACTGCGAATACTaGTTAAATTCCCACTCACCA +
Preference number: 4 (lower is better)
Translates to: WGLRTNPGGMIKTNGHFLTNCEY*LNSHSP
Trigger: TGGTGAGTGGGAATTTAAGCAGTATTCGCAGTTTGT...TAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp CTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCCTTTGTCTTGTAGGTCCTTaGCTGTCTCTTGTTATAACC +
Preference number: 4 (lower is better)
Translates to: LRTNPGGMIKTNGHFLLLCLVGP*LSLVIT
Trigger: GGTTATAACAAGAGACAGCCAAGGACCTACAAGACA...AAGGAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp GGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCTCAATGTACTATGTATaGCTAATAACTGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: GLRTNPGGMIKTNGHFLLSMYYV*LITGPI
Trigger: GATGGGCCCAGTTATTAGCCATACATAGTACATTGA...GAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CCA 90 bp ACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCCTTTTTCCATTCCTCACCCGCTGGTaGAGGTGTATCAATGTACTA +
Preference number: 4 (lower is better)
Translates to: TNPGGMIKTNGHFLLLFPFLTRW*RCINVL
Trigger: TAGTACATTGATACACCTCCACCAGCGGGTGAGGAA...TGGAAAAAGGAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CCA 90 bp GGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTCATAGCCCTGACACAATaGACAGTACATAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: GLRTNPGGMIKTNGHFLLIALTQ*TVHNSD
Trigger: ATCTGAGTTATGTACTGTCCATTGTGTCAGGGCTAT...GAGTAAGAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp ATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGATGGGTTTCCAGCTCTaGAGAACAACTTTCTTATTT +
Preference number: 4 (lower is better)
Translates to: ILLGSWGLRTNPGGMIKTMGFQL*RTTFLF
Trigger: AAATAAGAAAGTTGTTCTCCAGAGCTGGAAACCCAT...CGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR TCA 90 bp GAACCTAAATATCCTATAGTTAGCATCCACAGGAAAGAAAGACCTGGCAATGTAATACCTGAAATTTGCTaGTACCCCAAGCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: EPKYPIVSIHRKERPGNVIPEIC*YPKPAT
Trigger: AGTAGCTGGCTTGGGGTATCAGCAAATTTCAGGTAT...TACATTGCCAGGTCTTTCTTTCCTGTGGATGCTAACTATAGGATATTTAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR GCA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGTAGACTGTATCTTTTaGTGCAAAATATTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GTFVPEYQVIGLISVTACVDCIF*CKILLP
Trigger: TGGCAGCAATATTTTGCAGCAAAAGATACAGTCTAC...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGTGCGCTGTTACACTGTaGAAAATCAAGTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVCAVTL*KIKSTV
Trigger: GACAGTTGACTTGATTTTGCACAGTGTAACAGCGCA...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACCTGAATATTTATAAGTaGAGTGAAGTGGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: VPEYQVIGLISVTACDKHLNIYK*SEVEFS
Trigger: ACTGAACTCCACTTCACTGCACTTATAAATATTCAG...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp CACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAACTGAATATTTATAAGTaGAGTGAAGTGGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: HILLGSWGLRTNPGGMIKLNIYK*SEVEFS
Trigger: ACTGAACTCCACTTCACTGCACTTATAAATATTCAG...TTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCTGAATATTTATAAGTaGAGTGAAGTGGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: EYQVIGLISVTACDKHIGLNIYK*SEVEFS
Trigger: ACTGAACTCCACTTCACTGCACTTATAAATATTCAG...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CCA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTCCTGATGGGAATATCTaGTTATTCTACAGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSPDGNI*LFYSLN
Trigger: GTTTAAACTGTAGAATAACCAGATATTCCCATCAGG...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR TCA 90 bp GAACCTAAATATCCTATAGTTAGCATCCACAGGAAAGAAAGACCTGGCAATGTATTCTGCACATATTCTTaGTTTAGTACGTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: EPKYPIVSIHRKERPGNVFCTYS*FSTCVG
Trigger: CCCCACACACGTACTAAATCAAGAATATGTGCAGAA...TACATTGCCAGGTCTTTCTTTCCTGTGGATGCTAACTATAGGATATTTAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
3UTR CAA 72 bp CACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAACCTCGAACACTTAAAA +
Preference number: 4 (lower is better)
Translates to: HCAKSSQLSCRS*AVSCYNLEHLK
Trigger: TTTTAAGTGTTCGAGGTTATAACAAGAGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGTATGGTTTAATAGTATaGAGGCCCTGTACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVYGLIV*RPCTCL
Trigger: TAAACAGGTACAGGGCCTGCATACTATTAAACCATA...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000526821.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR GCA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGCAATCTGGGAACATTTaGTTTCATCCACTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVQSGNI*FHPLFR
Trigger: ACGAAAAAGTGGATGAAAGCAAATGTTCCCAGATTG...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CCA 90 bp ATATTTATAAGTGCAGTGAAGTGGAGTTCAGTACCTGTCCATTGTCCTACAAAATGTCTTGTAGGTCCTTaGCTGTCTCTTGTTATAACC +
Preference number: 4 (lower is better)
Translates to: IFISAVKWSSVPVHCPTKCLVGP*LSLVIT
Trigger: GGTTATAACAAGAGACAGCCAAGGACCTACAAGACA...TTTTGTAGGACAATGGACAGGTACTGAACTCCACTTCACTGCACTTATAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR GCA 90 bp ATATTTATAAGTGCAGTGAAGTGGAGTTCAGTACCTGTCCATTGTCCTACAAAACTGAATATTTATAAGTaGAGTGAAGTGGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: IFISAVKWSSVPVHCPTKLNIYK*SEVEFS
Trigger: ACTGAACTCCACTTCACTGCACTTATAAATATTCAG...TTTTGTAGGACAATGGACAGGTACTGAACTCCACTTCACTGCACTTATAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS TCA 90 bp CCGGCCCGAGCCGGGGCGCACTGGGAAGACGCGCAGCTGCGCGGGTaGCACGAGCCCCAGGCCCAGGGCGCGGCTGCGCACCGCGCACAG +
Preference number: 5 (lower is better)
Translates to: PARAGAHWEDAQLRG*HEPQAQGAAAHRAQ
Trigger: CTGTGCGCGGTGCGCAGCCGCGCCCTGGGCCTGGGGCTCGTGTCACCCGCGCAGCTGCGCGTCTTCCCAGTGCGCCCCGGCTCGGGCCGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS GCA 90 bp CGCGCAGCTGCGCGGGTGACACGAGCCCCAGGCCCAGGGCGCGGCTaGGCACCGCGCACAGGCCCCGGTAGAGACCGGCCACCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: RAAARVTRAPGPGRG*APRTGPGRDRPPAG
Trigger: TCCTGCAGGTGGCCGGTCTCTACCGGGGCCTGTGCGCGGTGCGCAGCCGCGCCCTGGGCCTGGGGCTCGTGTCACCCGCGCAGCTGCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS CCA 90 bp TGCGCAGCAGCTGGATCTTGTCGCGGTAGCGGTCGTAGAAAGGGTTaGCCTGGAGCTCGGCCTCGGCCCCGACCCCGCTGCTGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: CAAAGSCRGSGRRKG*PGARPRPRPRCCRR
Trigger: GCGCCGACAGCAGCGGGGTCGGGGCCGAGGCCGAGCTCCAGGCCAACCCTTTCTACGACCGCTACCGCGACAAGATCCAGCTGCTGCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000487193.1
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCCCTCAGCAACATTTGTaGGACAGGACTGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTPQQHL*DRTEPG
Trigger: ACCGGGCTCAGTCCTGTCCAACAAATGTTGCTGAGG...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR CAA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACAATACTGGGGGCCTaGGGTTCAGAAGGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPTILGA*GSEGWC
Trigger: ACACCAGCCTTCTGAACCCAAGGCCCCCAGTATTGT...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS GCA 90 bp AATCACCTTGCCTGGAATGCCCCACTGGCTGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACTCAAAAGCAGCTGGGTCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: NHLAWNAPLAASEIH*VSPGGTQKQLGLTC
Trigger: GCAGGTCAGACCCAGCTGCTTTTGAGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000460928.1
ENST00000474020.5
ENST00000487193.1
ENST00000574428.5
ENST00000576409.5
CDS GCA 90 bp AATCACCTTGCCTGGAATGCCCCACTGGCTGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACTCAAAAGCAGCTGGGTCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: NHLAWNAPLAASEIH*VSPGGTQKQLGLTW
Trigger: CCAGGTCAGACCCAGCTGCTTTTGAGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS-3UTR CAA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGTGCCTCAGCAACATTaGTTGGACAGGACTGAGCCC +
Preference number: 5 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCVPQQH*LDRTEP
Trigger: GGGCTCAGTCCTGTCCAACAAATGTTGCTGAGGCAC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR CAA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPVEELN*VGDALC
Trigger: GCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTAC...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCATGCTCCAAGTCCGCTTaGCTCCAATTCAGCGATGAC +
Preference number: 5 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPCSKSA*LQFSDD
Trigger: GTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCA...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCVEELN*VGDALC
Trigger: GCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTAC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTTGCTCCAAGTCCGCTTaGCTCCAATTCAGCGATGAC +
Preference number: 5 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGCSKSA*LQFSDD
Trigger: GTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCA...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAGCACATAGAAATGTaGGACAGGACTGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGEHIEM*DRTEPG
Trigger: ACCGGGCTCAGTCCTGTCCAACATTTCTATGTGCTC...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTGAGCACATAGAAATGTaGGACAGGACTGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: GWALDYRGLSQLGEGPTCEHIEM*DRTEPG
Trigger: ACCGGGCTCAGTCCTGTCCAACATTTCTATGTGCTC...ACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAGAGCACATAGAAATGTaGGACAGGACTGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQEHIEM*DRTEPG
Trigger: ACCGGGCTCAGTCCTGTCCAACATTTCTATGTGCTC...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp CAGGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTCTCCTACACCAGTTaGTTCTGTGCACCATCCTTC +
Preference number: 5 (lower is better)
Translates to: QASAAHTWITPYSPWRWPLSYTS*FCAPSF
Trigger: GAAGGATGGTGCACAGAACAAACTGGTGTAGGAGAG...AGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS GCA 90 bp AATCACCTTGCCTGGAATGCCCCACTGGCTGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACTCAAAAGCAGCTGGGTCTGACATTC +
Preference number: 5 (lower is better)
Translates to: NHLAWNAPLAASEIH*VSPGGTQKQLGLTF
Trigger: GAATGTCAGACCCAGCTGCTTTTGAGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
CDS CCA 90 bp GCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTaGCCTCTCCTACACCAGTTTGTTCTGTGCACCATCCTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: ASAAHTWITPYSPWR*PLLHQFVLCTILLF
Trigger: GAACAGAAGGATGGTGCACAGAACAAACTGGTGTAGGAGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000487193.1
ENST00000525633.1
ENST00000529214.5
ENST00000542495.5
CDS CCA 90 bp TTCCCCAAGGCATCTGTCTTAATTCAGGCTTCTGCAGCCCACACCTaGATTACTCCATATTCTCCCTGGCGCTGGCCTCTCCTACACCAG +
Preference number: 5 (lower is better)
Translates to: FPKASVLIQASAAHT*ITPYSPWRWPLLHQ
Trigger: CTGGTGTAGGAGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCCTGAATTAAGACAGATGCCTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000487193.1
ENST00000525633.1
ENST00000529214.5
ENST00000542495.5
CDS-3UTR CAA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTCTCCTACACCAGTTaGTTCTGTGCACCATCCTTC +
Preference number: 5 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQLSYTS*FCAPSF
Trigger: GAAGGATGGTGCACAGAACAAACTGGTGTAGGAGAG...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
CDS-3UTR CAA 90 bp TGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACACATCTCTGTGACTGCTaGCGACAAGCACATAGGGCA +
Preference number: 5 (lower is better)
Translates to: WALDYRGLSQLGEGPTCTHLCDC*RQAHRA
Trigger: TGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATG...TGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCACTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAAC +
Preference number: 5 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPLSCRS*AVSCYN
Trigger: GTTATAACAAGAGACAGCCAAGGACCTACAAGACAG...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp ATGTCCTTGGCACTGCGAACAGAGATAAGTCCTGGCCCTCAAGGAGCTCACAGTGAGCACATAGAAATGTaGGACAGGACTGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: MSLALRTEISPGPQGAHSEHIEM*DRTEPG
Trigger: ACCGGGCTCAGTCCTGTCCAACATTTCTATGTGCTC...ACTGTGAGCTCCTTGAGGGCCAGGACTTATCTCTGTTCGCAGTGCCAAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS GCA 90 bp TGGGAAATTTTCTCTGATACCTCTAGCCTACTACCATGTGTGCCTTaGCTTGACCACCAGACTGCTCCTCTTGGGAGCAGGAAGTACCCC +
Preference number: 5 (lower is better)
Translates to: WEIFSDTSSLLPCVP*LDHQTAPLGSRKYP
Trigger: GGGGTACTTCCTGCTCCCAAGAGGAGCAGTCTGGTGGTCAAGGCAAGGCACACATGGTAGTAGGCTAGAGGTATCAGAGAAAATTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460928.1
CDS-3UTR CAA 90 bp GGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTATTGAACTGAGAGTCTaGTCCTTAGTGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: GFCSPHLDYSIFSLALASIELRV*SLVNPL
Trigger: CAGAGGATTCACTAAGGACAAGACTCTCAGTTCAAT...AGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR CAA 90 bp AGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAATTGAACTGAGAGTCTaGTCCTTAGTGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: RRGWALDYRGLSQLGEGPIELRV*SLVNPL
Trigger: CAGAGGATTCACTAAGGACAAGACTCTCAGTTCAAT...TGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCATTGAACTGAGAGTCTaGTCCTTAGTGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTIELRV*SLVNPL
Trigger: CAGAGGATTCACTAAGGACAAGACTCTCAGTTCAAT...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp CAGGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCGTAGACTGTATCTTTaGCTGCAAAATATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QASAAHTWITPYSPWRWPRRLYL*LQNIAA
Trigger: GGCAGCAATATTTTGCAGCAAAAGATACAGTCTACG...AGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR CAA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCCGTAGACTGTATCTTTaGCTGCAAAATATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTRRLYL*LQNIAA
Trigger: GGCAGCAATATTTTGCAGCAAAAGATACAGTCTACG...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCAACGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: GLISVTACDKHIGQLITNVEELN*VGDALC
Trigger: GCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTAC...GTTGGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVVEELN*VGDALC
Trigger: GCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTAC...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTTGCTCCAAGTCCGCTTaGCTCCAATTCAGCGATGAC +
Preference number: 5 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVCSKSA*LQFSDD
Trigger: GTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCA...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GTCATGCCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGTGCTCCAAGTCCGCTTaGCTCCAATTCAGCGATGAC +
Preference number: 5 (lower is better)
Translates to: VMPHTFIHGHILLGSWGLCSKSA*LQFSDD
Trigger: GTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCA...CAGTCCCCAACTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGGCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CAA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTGAGCACATAGAAATGTaGGACAGGACTGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVEHIEM*DRTEPG
Trigger: ACCGGGCTCAGTCCTGTCCAACATTTCTATGTGCTC...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000532925.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS GCA 90 bp TCCCATGGGAAATTTTCTCTGATACCTCTAGCCTACTACCATGTGTaGCTTGCCTTGACCACCAGACTGCTCCTCTTGGGAGCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: SHGKFSLIPLAYYHV*LALTTRLLLLGAGS
Trigger: ACTTCCTGCTCCCAAGAGGAGCAGTCTGGTGGTCAAGGCAAGGCACACATGGTAGTAGGCTAGAGGTATCAGAGAAAATTTCCCATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460928.1
CDS GCA 90 bp CCATCCTTCTGTTCCACACATTTGATAAAATCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGAAATTCACTGCGTTTCTCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: PSFCSTHLIKSPCLE*PTGCFRNSLRFSRR
Trigger: CCGCCTGGAGAAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGATTTTATCAAATGTGTGGAACAGAAGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000487193.1
ENST00000525633.1
ENST00000529214.5
ENST00000542495.5
CDS-3UTR CAA 90 bp GGCTTCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTGGCCTCTTTCTGTTCCACACATTaGATAAAATCACCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: GFCSPHLDYSIFSLALASFCSTH*IKSPCL
Trigger: CAGGCAAGGTGATTTTATCAAATGTGTGGAACAGAA...AGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487193.1
ENST00000529214.5
CDS-3UTR CAA 90 bp AGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTTCTGTTCCACACATTaGATAAAATCACCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: RGWALDYRGLSQLGEGPTFCSTH*IKSPCL
Trigger: CAGGCAAGGTGATTTTATCAAATGTGTGGAACAGAA...GGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAAATTGAACTGAGAGTCTaGTCCTTAGTGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQIELRV*SLVNPL
Trigger: CAGAGGATTCACTAAGGACAAGACTCTCAGTTCAAT...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTATTGAACTGAGAGTCTaGTCCTTAGTGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGIELRV*SLVNPL
Trigger: CAGAGGATTCACTAAGGACAAGACTCTCAGTTCAAT...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000534216.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACTAGGTCGTAGACTGTATCTTTaGCTGCAAAATATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: EFLRRGWALDYRGLSQLGRRLYL*LQNIAA
Trigger: GGCAGCAATATTTTGCAGCAAAAGATACAGTCTACG...ACCTAGTTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCTCTTGAGTTCCTGAGGAGGGGGTGGGCTCTAGACTATCGAGGGCTGAGTCAACGTAGACTGTATCTTTaGCTGCAAAATATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ALEFLRRGWALDYRGLSQRRLYL*LQNIAA
Trigger: GGCAGCAATATTTTGCAGCAAAAGATACAGTCTACG...TTGACTCAGCCCTCGATAGTCTAGAGCCCACCCCCTCCTCAGGAACTCAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCCCTCAGCAACATTTGTaGGACAGGACTGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVPQQHL*DRTEPG
Trigger: ACCGGGCTCAGTCCTGTCCAACAAATGTTGCTGAGG...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR CAA 90 bp GGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACCATCCTACTTGGCAGTaGGGGACTGAGGACAAATCC +
Preference number: 5 (lower is better)
Translates to: GSWGLRTNPGGMIKTNGHHPTWQ*GTEDKS
Trigger: GGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATG...GTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS GCA 90 bp TCTGTCTTCTGTTCCACACATTTGATAAAATCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGAAATTCACTGCGTTTCTCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SVFCSTHLIKSPCLE*PTGCFRNSLRFSRR
Trigger: CCGCCTGGAGAAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGATTTTATCAAATGTGTGGAACAGAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000474020.5
ENST00000526821.5
ENST00000532925.5
ENST00000574428.5
ENST00000576409.5
CDS CCA 90 bp CTGTTCCACACATTTGATAAAATCACCTTGCCTGGAATGCCCCACTaGCTGCTTCCGAAATTCACTGCGTTTCTCCAGGCGGGACTCAAA +
Preference number: 5 (lower is better)
Translates to: LFHTFDKITLPGMPH*LLPKFTAFLQAGLK
Trigger: TTTGAGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGATTTTATCAAATGTGTGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000460928.1
ENST00000474020.5
ENST00000487193.1
ENST00000525633.1
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS CCA 90 bp AAACCAAGTTGGTTGCTGAGTCTCACCAATATGAACTGGCACTGGTaGTTGGCTGTGGGGAGACACACTGAACCAGTACTTGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: KPSWLLSLTNMNWHW*LAVGRHTEPVLVDG
Trigger: TCCATCCACAAGTACTGGTTCAGTGTGTCTCCCCACAGCCAACCACCAGTGCCAGTTCATATTGGTGAGACTCAGCAACCAACTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS CCA 90 bp TGCAAACCAAGTTGGTTGCTGAGTCTCACCAATATGAACTGGCACTaGTGGTTGGCTGTGGGGAGACACACTGAACCAGTACTTGTGGAT +
Preference number: 5 (lower is better)
Translates to: CKPSWLLSLTNMNWH*WLAVGRHTEPVLVD
Trigger: ATCCACAAGTACTGGTTCAGTGTGTCTCCCCACAGCCAACCACCAGTGCCAGTTCATATTGGTGAGACTCAGCAACCAACTTGGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS-3UTR CAA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGTGCCTCAGCAACATTaGTTGGACAGGACTGAGCCC +
Preference number: 5 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLVPQQH*LDRTEP
Trigger: GGGCTCAGTCCTGTCCAACAAATGTTGCTGAGGCAC...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS-3UTR CAA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTGCTCCAAGTCCGCTTaGCTCCAATTCAGCGATGAC +
Preference number: 5 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVCSKSA*LQFSDD
Trigger: GTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCA...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCCATCTCTGTGACTGCTaGCGACAAGCACATAGGGCA +
Preference number: 5 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVHLCDC*RQAHRA
Trigger: TGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATG...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS CCA 90 bp TCACTTTGCAAACCAAGTTGGTTGCTGAGTCTCACCAATATGAACTaGCACTGGTGGTTGGCTGTGGGGAGACACACTGAACCAGTACTT +
Preference number: 5 (lower is better)
Translates to: SLCKPSWLLSLTNMN*HWWLAVGRHTEPVL
Trigger: AAGTACTGGTTCAGTGTGTCTCCCCACAGCCAACCACCAGTGCCAGTTCATATTGGTGAGACTCAGCAACCAACTTGGTTTGCAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS-3UTR CAA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLVEELN*VGDALC
Trigger: GCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTAC...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSVEELN*VGDALC
Trigger: GCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTAC...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp AGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: SWGLRTNPGGMIKTNGHFVEELN*VGDALC
Trigger: GCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTAC...GAAGTGGCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492233.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACTGCTCCAAGTCCGCTTaGCTCCAATTCAGCGATGAC +
Preference number: 5 (lower is better)
Translates to: VPEYQVIGLISVTACDKHCSKSA*LQFSDD
Trigger: GTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCA...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTCATCTCTGTGACTGCTaGCGACAAGCACATAGGGCA +
Preference number: 5 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSHLCDC*RQAHRA
Trigger: TGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATG...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACCATCTCTGTGACTGCTaGCGACAAGCACATAGGGCA +
Preference number: 5 (lower is better)
Translates to: VPEYQVIGLISVTACDKHHLCDC*RQAHRA
Trigger: TGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATG...GTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCATCTCTGTGACTGCTaGCGACAAGCACATAGGGCA +
Preference number: 5 (lower is better)
Translates to: EYQVIGLISVTACDKHIGHLCDC*RQAHRA
Trigger: TGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATG...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTCTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAAC +
Preference number: 5 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVLSCRS*AVSCYN
Trigger: GTTATAACAAGAGACAGCCAAGGACCTACAAGACAG...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCATCCTACTTGGCAGTaGGGGACTGAGGACAAATCC +
Preference number: 5 (lower is better)
Translates to: EYQVIGLISVTACDKHIGHPTWQ*GTEDKS
Trigger: GGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGATG...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS GCA 90 bp TTGCTGTTAGGAAGGCAATGTCCTTCCTGTCTGATGGGGTCACTTTaGAAACCAAGTTGGTTGCTGAGTCTCACCAATATGAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: LLLGRQCPSCLMGSL*KPSWLLSLTNMNWH
Trigger: GTGCCAGTTCATATTGGTGAGACTCAGCAACCAACTTGGTTTGCAAAGTGACCCCATCAGACAGGAAGGACATTGCCTTCCTAACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS-3UTR CAA 90 bp GCTCTAGACTATCGAGGGCTGAGTCAACTAGGTGAAGGGCCAACCTGTACAGTTCGTAGACTGTATCTTTaGCTGCAAAATATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ALDYRGLSQLGEGPTCTVRRLYL*LQNIAA
Trigger: GGCAGCAATATTTTGCAGCAAAAGATACAGTCTACG...AACTGTACAGGTTGGCCCTTCACCTAGTTGACTCAGCCCTCGATAGTCTAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCTGCTCCAAGTCCGCTTaGCTCCAATTCAGCGATGAC +
Preference number: 5 (lower is better)
Translates to: GTFVPEYQVIGLISVTACCSKSA*LQFSDD
Trigger: GTCATCGCTGAATTGGAGCAAAGCGGACTTGGAGCA...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCCATCTCTGTGACTGCTaGCGACAAGCACATAGGGCA +
Preference number: 5 (lower is better)
Translates to: GTFVPEYQVIGLISVTACHLCDC*RQAHRA
Trigger: TGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATG...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGCTCTCCTACACCAGTTaGTTCTGTGCACCATCCTTC +
Preference number: 5 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLLSYTS*FCAPSF
Trigger: GAAGGATGGTGCACAGAACAAACTGGTGTAGGAGAG...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529214.5
ENST00000542495.5
CDS-3UTR CAA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCATTGAACTGAGAGTCTaGTCCTTAGTGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: IGLISVTACDKHIGQLITIELRV*SLVNPL
Trigger: CAGAGGATTCACTAAGGACAAGACTCTCAGTTCAAT...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp ATAGAAATGTTGGACAGGACTGAGCCCGGTTCCAGATCAAATCAAACTTTTCTGGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: IEMLDRTEPGSRSNQTFLVEELN*VGDALC
Trigger: GCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTAC...CAGAAAAGTTTGATTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR CAA 90 bp CTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAAC +
Preference number: 5 (lower is better)
Translates to: LGSWGLRTNPGGMIKTNGLSCRS*AVSCYN
Trigger: GTTATAACAAGAGACAGCCAAGGACCTACAAGACAG...GCCATTCGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CAA 90 bp ATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTACCTTCTGTTCCACACATTaGATAAAATCACCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: IGLISVTACDKHIGQLITFCSTH*IKSPCL
Trigger: CAGGCAAGGTGATTTTATCAAATGTGTGGAACAGAA...GGTAATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCAACTCATTCGTAGACTGTATCTTTaGCTGCAAAATATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VIGLISVTACDKHIGQLIRRLYL*LQNIAA
Trigger: GGCAGCAATATTTTGCAGCAAAAGATACAGTCTACG...AATGAGTTGCCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTCTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAAC +
Preference number: 5 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSLSCRS*AVSCYN
Trigger: GTTATAACAAGAGACAGCCAAGGACCTACAAGACAG...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGGAGCACATAGAAATGTaGGACAGGACTGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVEHIEM*DRTEPG
Trigger: ACCGGGCTCAGTCCTGTCCAACATTTCTATGTGCTC...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371937.8
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS TCA 90 bp AAGCAACCCTTACGTGATCACCAGAAACTTACTGTTGGACAGGACTaGGCCCGGTTCCAGATCAAATCAAACTTTTCTGCAGGAATAACT +
Preference number: 5 (lower is better)
Translates to: KQPLRDHQKLTVGQD*ARFQIKSNFSAGIT
Trigger: AGTTATTCCTGCAGAAAAGTTTGATTTGATCTGGAACCGGGCTCAGTCCTGTCCAACAGTAAGTTTCTGGTGATCACGTAAGGGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474020.5
CDS-3UTR CAA 90 bp GCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTTCTGTTCCACACATTaGATAAAATCACCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: ALLHCAKSSQLSCRSLAVFCSTH*IKSPCL
Trigger: CAGGCAAGGTGATTTTATCAAATGTGTGGAACAGAA...GACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCGACAAGCACATAGGGCGTAGACTGTATCTTTaGCTGCAAAATATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: EYQVIGLISVTACDKHIGRRLYL*LQNIAA
Trigger: GGCAGCAATATTTTGCAGCAAAAGATACAGTCTACG...CCCTATGTGCTTGTCGCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp ATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGCGTAGACTGTATCTTTaGCTGCAAAATATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ILLGSWGLRTNPGGMIKTRRLYL*LQNIAA
Trigger: GGCAGCAATATTTTGCAGCAAAAGATACAGTCTACG...CGTTTTAATCATTCCTCCTGGATTTGTCCTCAGTCCCCAACTGCCAAGTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CAA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCCTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAAC +
Preference number: 5 (lower is better)
Translates to: GTFVPEYQVIGLISVTACLSCRS*AVSCYN
Trigger: GTTATAACAAGAGACAGCCAAGGACCTACAAGACAG...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp CGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGGCTGTCTCCAATCTGGGAACATTaGCTTTCATCCACTTTTTCG +
Preference number: 5 (lower is better)
Translates to: RCYTVQNQVNCLVGPWLSPIWEH*LSSTFS
Trigger: CGAAAAAGTGGATGAAAGCAAATGTTCCCAGATTGG...AGACAGCCAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS CCA 90 bp AGTACTTTGCCTAGAAAGAGCAGGATAAACATTTATGGATGGAAATaGAGTTGGGAGAGACTATGTTCAGTTCACCCAGCTGACCCATCA +
Preference number: 5 (lower is better)
Translates to: STLPRKSRINIYGWK*SWERLCSVHPADPS
Trigger: TGATGGGTCAGCTGGGTGAACTGAACATAGTCTCTCCCAACTCCATTTCCATCCATAAATGTTTATCCTGCTCTTTCTAGGCAAAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460928.1
CDS-3UTR CAA 90 bp GGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGACTGCTTGCTTCTGTTCCACACATTaGATAAAATCACCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: GTFVPEYQVIGLISVTACFCSTH*IKSPCL
Trigger: CAGGCAAGGTGATTTTATCAAATGTGTGGAACAGAA...GCAAGCAGTCACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS-3UTR CAA 90 bp GCAACTGCGCTGTTACACTGTGCAAAATCAAGTCAACTGTCTTGTAGGTCCTTGATAAATATAATGTATTaGGAGTTTGCAAAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: ATALLHCAKSSQLSCRSLINIMY*EFAKGA
Trigger: GGCCCCCTTTGCAAACTCCAAATACATTATATTTAT...CAAGGACCTACAAGACAGTTGACTTGATTTTGCACAGTGTAACAGCGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576409.5
CDS-3UTR CAA 90 bp GAATGTTCAGGTACCTTTGTTCCTGAATATCAAGTAATAGGGCTCATCTCTGTGATTGAACTGAGAGTCTaGTCCTTAGTGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: ECSGTFVPEYQVIGLISVIELRV*SLVNPL
Trigger: CAGAGGATTCACTAAGGACAAGACTCTCAGTTCAAT...CACAGAGATGAGCCCTATTACTTGATATTCAGGAACAAAGGTACCTGAACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000526821.5
ENST00000529214.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS TCA 90 bp AGTAAACAGAGCACTATAACATGTGAGACAGTATGGAATATGACGTaGTGGGCTGGAAAATACTTGTTTGGCAACATTGATAAGCAACCC +
Preference number: 5 (lower is better)
Translates to: SKQSTITCETVWNMT*WAGKYLFGNIDKQP
Trigger: GGGTTGCTTATCAATGTTGCCAAACAAGTATTTTCCAGCCCATCACGTCATATTCCATACTGTCTCACATGTTATAGTGCTCTGTTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474020.5
CDS-3UTR CAA 90 bp ATATTTATAAGTGCAGTGAAGTGGAGTTCAGTACCTGTCCATTGTCCTACAAAACTGTCTTGTAGGTCCTaGGCTGTCTCTTGTTATAAC +
Preference number: 5 (lower is better)
Translates to: IFISAVKWSSVPVHCPTKLSCRS*AVSCYN
Trigger: GTTATAACAAGAGACAGCCAAGGACCTACAAGACAG...TTTTGTAGGACAATGGACAGGTACTGAACTCCACTTCACTGCACTTATAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS-3UTR CAA 90 bp AATTCAGCGATGACAGACATATATTTGAACTCATTTGGTCTGAGGTTAAAGGTCATTGAACTGAGAGTCTaGTCCTTAGTGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: NSAMTDIYLNSFGLRLKVIELRV*SLVNPL
Trigger: CAGAGGATTCACTAAGGACAAGACTCTCAGTTCAAT...GACCTTTAACCTCAGACCAAATGAGTTCAAATATATGTCTGTCATCGCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529214.5
CDS TCA 72 bp GCCGGGGCGCACTGGGAAGACGCGCAGCTGCGCGGGTaGCACGAGCCCCAGGCCCAGGGCGCGGCTGCGCAC +
Preference number: 6 (lower is better)
Translates to: AGAHWEDAQLRG*HEPQAQGAAAH
Trigger: GTGCGCAGCCGCGCCCTGGGCCTGGGGCTCGTGTCACCCGCGCAGCTGCGCGTCTTCCCAGTGCGCCCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS GCA 72 bp GCGCGGGTGACACGAGCCCCAGGCCCAGGGCGCGGCTaGGCACCGCGCACAGGCCCCGGTAGAGACCGGCCA +
Preference number: 6 (lower is better)
Translates to: ARVTRAPGPGRG*APRTGPGRDRP
Trigger: TGGCCGGTCTCTACCGGGGCCTGTGCGCGGTGCGCAGCCGCGCCCTGGGCCTGGGGCTCGTGTCACCCGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000574428.5
ENST00000576409.5
CDS GCA 72 bp GCCTGGAATGCCCCACTGGCTGCTTCCGAAATTCACTaGGTTTCTCCAGGCGGGACTCAAAAGCAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: AWNAPLAASEIH*VSPGGTQKQLG
Trigger: ACCCAGCTGCTTTTGAGTCCCGCCTGGAGAAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000460928.1
ENST00000474020.5
ENST00000487193.1
ENST00000525633.1
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS CCA 72 bp GCCCACACCTGGATTACTCCATATTCTCCCTGGCGCTaGCCTCTCCTACACCAGTTTGTTCTGTGCACCATC +
Preference number: 6 (lower is better)
Translates to: AHTWITPYSPWR*PLLHQFVLCTI
Trigger: GATGGTGCACAGAACAAACTGGTGTAGGAGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000487193.1
ENST00000525633.1
ENST00000529214.5
ENST00000542495.5
CDS CCA 72 bp TCTGCAGCCCACACCTGGATTACTCCATATTCTCCCTaGCGCTGGCCTCTCCTACACCAGTTTGTTCTGTGC +
Preference number: 6 (lower is better)
Translates to: SAAHTWITPYSP*RWPLLHQFVLC
Trigger: GCACAGAACAAACTGGTGTAGGAGAGGCCAGCGCCAGGGAGAATATGGAGTAATCCAGGTGTGGGCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000487193.1
ENST00000525633.1
ENST00000529214.5
ENST00000542495.5
CDS GCA 72 bp AGCGTAGAAGAGCTGAACTTGGTTGGCGATGCACTGTaGCTCAGCAACATTTGTTGGACAGGACTGAGCCCG +
Preference number: 6 (lower is better)
Translates to: SVEELNLVGDAL*LSNICWTGLSP
Trigger: CGGGCTCAGTCCTGTCCAACAAATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS CAA 90 bp GCCTACTACCATGTGTGCCTTGCCTTGACCACCAGACTGCTCCTCTaGGGAGCAGGAAGTACCCCTCTCATACTTCTATATCTCCACCAT +
Preference number: 6 (lower is better)
Translates to: AYYHVCLALTTRLLL*GAGSTPLILLYLHH
Trigger: ATGGTGGAGATATAGAAGTATGAGAGGGGTACTTCCTGCTCCCAAGAGGAGCAGTCTGGTGGTCAAGGCAAGGCACACATGGTAGTAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460928.1
CDS CCA 72 bp TGGTTGCTGAGTCTCACCAATATGAACTGGCACTGGTaGTTGGCTGTGGGGAGACACACTGAACCAGTACTT +
Preference number: 6 (lower is better)
Translates to: WLLSLTNMNWHW*LAVGRHTEPVL
Trigger: AAGTACTGGTTCAGTGTGTCTCCCCACAGCCAACCACCAGTGCCAGTTCATATTGGTGAGACTCAGCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS CAA 72 bp CATATTCTCCCTGGCGCTGGCCTCTCCTACACCAGTTaGTTCTGTGCACCATCCTTCTGTTCCACACATTTG +
Preference number: 6 (lower is better)
Translates to: HILPGAGLSYTS*FCAPSFCSTHL
Trigger: CAAATGTGTGGAACAGAAGGATGGTGCACAGAACAAACTGGTGTAGGAGAGGCCAGCGCCAGGGAGAATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000487193.1
ENST00000525633.1
ENST00000529214.5
ENST00000542495.5
CDS CAA 90 bp CCATCCGTAGGTCTCTTTCCGATCAGTAGCGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGCCTCAGCAACATTCAGAAATGTGGA +
Preference number: 6 (lower is better)
Translates to: PSVGLFPISSVEELN*VGDALCLSNIQKCG
Trigger: TCCACATTTCTGAATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTACGCTACTGATCGGAAAGAGACCTACGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492233.5
CDS CAA 90 bp CAATGTCCTTCCTGTCTGATGGGGTCACTTTGCAAACCAAGTTGGTaGCTGAGTCTCACCAATATGAACTGGCACTGGTGGTTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: QCPSCLMGSLCKPSW*LSLTNMNWHWWLAV
Trigger: CACAGCCAACCACCAGTGCCAGTTCATATTGGTGAGACTCAGCAACCAACTTGGTTTGCAAAGTGACCCCATCAGACAGGAAGGACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS CAA 90 bp AAGGCAATGTCCTTCCTGTCTGATGGGGTCACTTTGCAAACCAAGTaGGTTGCTGAGTCTCACCAATATGAACTGGCACTGGTGGTTGGC +
Preference number: 6 (lower is better)
Translates to: KAMSFLSDGVTLQTK*VAESHQYELALVVG
Trigger: GCCAACCACCAGTGCCAGTTCATATTGGTGAGACTCAGCAACCAACTTGGTTTGCAAAGTGACCCCATCAGACAGGAAGGACATTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS CCA 72 bp ACATTTGATAAAATCACCTTGCCTGGAATGCCCCACTaGCTGCTTCCGAAATTCACTGCGTTTCTCCAGGCG +
Preference number: 6 (lower is better)
Translates to: TFDKITLPGMPH*LLPKFTAFLQA
Trigger: CGCCTGGAGAAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGATTTTATCAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000460928.1
ENST00000474020.5
ENST00000487193.1
ENST00000525633.1
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS CCA 72 bp TCACCCGCTGGTGGAGGTGTATCAATGTACTATGTATaGCTAATAACTGGGCCCATCCGTAGGTCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: SPAGGGVSMYYV*LITGPIRRSLS
Trigger: GGAAAGAGACCTACGGATGGGCCCAGTTATTAGCCATACATAGTACATTGATACACCTCCACCAGCGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492233.5
CDS CAA 72 bp GGTCTCTTTCCGATCAGTAGCGTAGAAGAGCTGAACTaGGTTGGCGATGCACTGTGCCTCAGCAACATTTGT +
Preference number: 6 (lower is better)
Translates to: GLFPISSVEELN*VGDALCLSNIC
Trigger: ACAAATGTTGCTGAGGCACAGTGCATCGCCAACCAAGTTCAGCTCTTCTACGCTACTGATCGGAAAGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS CAA 72 bp TCCTGTCTGATGGGGTCACTTTGCAAACCAAGTTGGTaGCTGAGTCTCACCAATATGAACTGGCACTGGTGG +
Preference number: 6 (lower is better)
Translates to: SCLMGSLCKPSW*LSLTNMNWHWW
Trigger: CCACCAGTGCCAGTTCATATTGGTGAGACTCAGCAACCAACTTGGTTTGCAAAGTGACCCCATCAGACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS GCA 72 bp AAATTTTCTCTGATACCTCTAGCCTACTACCATGTGTaGCTTGCCTTGACCACCAGACTGCTCCTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: KFSLIPLAYYHV*LALTTRLLLLG
Trigger: TCCCAAGAGGAGCAGTCTGGTGGTCAAGGCAAGGCACACATGGTAGTAGGCTAGAGGTATCAGAGAAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460928.1
CDS GCA 72 bp GGAAGGCAATGTCCTTCCTGTCTGATGGGGTCACTTTaGAAACCAAGTTGGTTGCTGAGTCTCACCAATATG +
Preference number: 6 (lower is better)
Translates to: GRQCPSCLMGSL*KPSWLLSLTNM
Trigger: CATATTGGTGAGACTCAGCAACCAACTTGGTTTGCAAAGTGACCCCATCAGACAGGAAGGACATTGCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS CAA 72 bp TCCTTCCTGTCTGATGGGGTCACTTTGCAAACCAAGTaGGTTGCTGAGTCTCACCAATATGAACTGGCACTG +
Preference number: 6 (lower is better)
Translates to: SFLSDGVTLQTK*VAESHQYELAL
Trigger: CAGTGCCAGTTCATATTGGTGAGACTCAGCAACCAACTTGGTTTGCAAAGTGACCCCATCAGACAGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS CAA 90 bp GTTCTGTGCACCATCCTTCTGTTCCACACATTTGATAAAATCACCTaGCCTGGAATGCCCCACTGGCTGCTTCCGAAATTCACTGCGTTT +
Preference number: 6 (lower is better)
Translates to: VLCTILLFHTFDKIT*PGMPHWLLPKFTAF
Trigger: AAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGATTTTATCAAATGTGTGGAACAGAAGGATGGTGCACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000487193.1
ENST00000525633.1
ENST00000529214.5
ENST00000542495.5
CDS CAA 90 bp TTTGCTGTTAGGAAGGCAATGTCCTTCCTGTCTGATGGGGTCACTTaGCAAACCAAGTTGGTTGCTGAGTCTCACCAATATGAACTGGCA +
Preference number: 6 (lower is better)
Translates to: FAVRKAMSFLSDGVT*QTKLVAESHQYELA
Trigger: TGCCAGTTCATATTGGTGAGACTCAGCAACCAACTTGGTTTGCAAAGTGACCCCATCAGACAGGAAGGACATTGCCTTCCTAACAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS TCA 72 bp ATGCACTGTGCCTCAGCAACATTTGTTGGACAGGACTaGGCCCGGTTCCAGATCAAATCAAACTTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: MHCASATFVGQD*ARFQIKSNFSA
Trigger: TGCAGAAAAGTTTGATTTGATCTGGAACCGGGCTCAGTCCTGTCCAACAAATGTTGCTGAGGCACAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329231.8
ENST00000526821.5
CDS TCA 72 bp CTTCTTGGCAGAGCACATAGAAATGTTGGACAGGACTaGGCCCGGTTCCAGATCAAATCAAACTTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: LLGRAHRNVGQD*ARFQIKSNFSA
Trigger: GGCAGAAAAGTTTGATTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATTTCTATGTGCTCTGCCAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534216.5
CDS GCA 72 bp TGTTCCACACATTTGATAAAATCACCTTGCCTGGAATaGCCCACTGGCTGCTTCCGAAATTCACTGCGTTTC +
Preference number: 6 (lower is better)
Translates to: CSTHLIKSPCLE*PTGCFRNSLRF
Trigger: GAAACGCAGTGAATTTCGGAAGCAGCCAGTGGGGCATTCCAGGCAAGGTGATTTTATCAAATGTGTGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000329231.8
ENST00000371937.8
ENST00000460928.1
ENST00000474020.5
ENST00000487193.1
ENST00000525633.1
ENST00000526821.5
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
ENST00000574428.5
ENST00000576409.5
CDS CAA 72 bp AGGAAGGCAATGTCCTTCCTGTCTGATGGGGTCACTTaGCAAACCAAGTTGGTTGCTGAGTCTCACCAATAT +
Preference number: 6 (lower is better)
Translates to: RKAMSFLSDGVT*QTKLVAESHQY
Trigger: ATATTGGTGAGACTCAGCAACCAACTTGGTTTGCAAAGTGACCCCATCAGACAGGAAGGACATTGCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS CAA 90 bp ACTGGCACTGGTGGTTGGCTGTGGGGAGACACACTGAACCAGTACTaGTGGATGGACTCAATATCCCTCTGTTCAGTATTTAAAACAAAA +
Preference number: 6 (lower is better)
Translates to: TGTGGWLWGDTLNQY*WMDSISLCSVFKTK
Trigger: TTTTGTTTTAAATACTGAACAGAGGGATATTGAGTCCATCCACAAGTACTGGTTCAGTGTGTCTCCCCACAGCCAACCACCAGTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525633.1
CDS CAA 72 bp ATAAGCAACCCTTACGTGATCACCAGAAACTTACTGTaGGACAGGACTGAGCCCGGTTCCAGATCAAATCAA +
Preference number: 6 (lower is better)
Translates to: ISNPYVITRNLL*DRTEPGSRSNQ
Trigger: TTGATTTGATCTGGAACCGGGCTCAGTCCTGTCCAACAGTAAGTTTCTGGTGATCACGTAAGGGTTGCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474020.5
CDS CAA 72 bp AAGCAGCTGGGTCTGACATTCAGGGTACTTAGAATTTaGAGGTCATCTTGCTGGATCACCTCTTCAGACAAG +
Preference number: 6 (lower is better)
Translates to: KQLGLTFRVLRI*RSSCWITSSDK
Trigger: CTTGTCTGAAGAGGTGATCCAGCAAGATGACCTCAAAATTCTAAGTACCCTGAATGTCAGACCCAGCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
CDS CAA 90 bp GCAACATTGATAAGCAACCCTTACGTGATCACCAGAAACTTACTGTaGGACAGGACTGAGCCCGGTTCCAGATCAAATCAAACTTTTCTG +
Preference number: 6 (lower is better)
Translates to: ATLISNPYVITRNLL*DRTEPGSRSNQTFL
Trigger: CAGAAAAGTTTGATTTGATCTGGAACCGGGCTCAGTCCTGTCCAACAGTAAGTTTCTGGTGATCACGTAAGGGTTGCTTATCAATGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474020.5
CDS CAA 90 bp GGGACTCAAAAGCAGCTGGGTCTGACATTCAGGGTACTTAGAATTTaGAGGTCATCTTGCTGGATCACCTCTTCAGACAAGAATCCTATA +
Preference number: 6 (lower is better)
Translates to: GTQKQLGLTFRVLRI*RSSCWITSSDKNPI
Trigger: TATAGGATTCTTGTCTGAAGAGGTGATCCAGCAAGATGACCTCAAAATTCTAAGTACCCTGAATGTCAGACCCAGCTGCTTTTGAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
CDS TCA 72 bp TTACGTGATCACCAGAAACTTACTGTTGGACAGGACTaGGCCCGGTTCCAGATCAAATCAAACTTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: LRDHQKLTVGQD*ARFQIKSNFSA
Trigger: TGCAGAAAAGTTTGATTTGATCTGGAACCGGGCTCAGTCCTGTCCAACAGTAAGTTTCTGGTGATCACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474020.5
CDS CCA 72 bp ACATTCAGGGTACTTAGAATTTTGAGGTCATCTTGCTaGATCACCTCTTCAGACAAGAATCCTATAGCCTCC +
Preference number: 6 (lower is better)
Translates to: TFRVLRILRSSC*ITSSDKNPIAS
Trigger: GGAGGCTATAGGATTCTTGTCTGAAGAGGTGATCCAGCAAGATGACCTCAAAATTCTAAGTACCCTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529214.5
ENST00000532925.5
ENST00000542495.5
CDS CAA 90 bp AGTACCCCTCTCATACTTCTATATCTCCACCATGACCACAGTACTTaGCCTAGAAAGAGCAGGATAAACATTTATGGATGGAAATGGAGT +
Preference number: 6 (lower is better)
Translates to: STPLILLYLHHDHST*PRKSRINIYGWKWS
Trigger: ACTCCATTTCCATCCATAAATGTTTATCCTGCTCTTTCTAGGCAAAGTACTGTGGTCATGGTGGAGATATAGAAGTATGAGAGGGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460928.1