RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP9A (Homo sapiens)

Ensembl gene IDs: ENSG00000054793

Ensembl transcript IDs: ENST00000311637.9, ENST00000338821.6, ENST00000477492.1

Found 642 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTGCCCACTGATGGGATGGGCCAACGACGTGGCAGTTTGCACTTaGGTGTCGGTACTTCTCACCCTTGACCGCCTCCGCCCCAGTGCG +
Preference number: 1 (lower is better)
Translates to: SCPLMGWANDVAVCT*VSVLLTLDRLRPSA
Trigger: CGCACTGGGGCGGAGGCGGTCAAGGGTGAGAAGTACCGACACTCAAGTGCAAACTGCCACGTCGTTGGCCCATCCCATCAGTGGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp GGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCCACTaGTGGGATGGGCCAACGACGTGGCAGTTTGCACTTGAGTGTCGG +
Preference number: 1 (lower is better)
Translates to: GVQGPSSEWRQPAAH*WDGPTTWQFALECR
Trigger: CCGACACTCAAGTGCAAACTGCCACGTCGTTGGCCCATCCCATCAGTGGGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 90 bp AATCTGCCGGCAGTGGAACAGATCCCAGATCCCAACGCTGTAGCTTaGGCGTCCTCCCACCAGGGGTTCCTTGTTCTGAAAGCTGCCACC +
Preference number: 1 (lower is better)
Translates to: NLPAVEQIPDPNAVA*ASSHQGFLVLKAAT
Trigger: GGTGGCAGCTTTCAGAACAAGGAACCCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGGATCTGGGATCTGTTCCACTGCCGGCAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp TTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTaGTGCAGCGTTAGGACTCCGTTTAGGCGCAGAGCCACTTCCCAT +
Preference number: 1 (lower is better)
Translates to: FRQAQMGLFQDPPSR*CSVRTPFRRRATSH
Trigger: ATGGGAAGTGGCTCTGCGCCTAAACGGAGTCCTAACGCTGCATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 90 bp TGTAGCTTGGGCGTCCTCCCACCAGGGGTTCCTTGTTCTGAAAGCTaGCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTGGGGTC +
Preference number: 1 (lower is better)
Translates to: CSLGVLPPGVPCSES*HQCCSERCLCLCGV
Trigger: GACCCCACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGGAACCCCTGGTGGGAGGACGCCCAAGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 90 bp CGGGTAATGCCGCTTTGGCCTGAGAAGATGCTTCGGAGCTCCAGGTaGAGGAGCTGCTCACGCTGCAGGATGCTTTGCAGGTTCATTCAA +
Preference number: 1 (lower is better)
Translates to: RVMPLWPEKMLRSSR*RSCSRCRMLCRFIQ
Trigger: TTGAATGAACCTGCAAAGCATCCTGCAGCGTGAGCAGCTCCTCCACCTGGAGCTCCGAAGCATCTTCTCAGGCCAAAGCGGCATTACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 90 bp AACCATGCTGTGGCGGAGAAGACAGATTCACGGGTAATGCCGCTTTaGCCTGAGAAGATGCTTCGGAGCTCCAGGTGGAGGAGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: NHAVAEKTDSRVMPL*PEKMLRSSRWRSCS
Trigger: TGAGCAGCTCCTCCACCTGGAGCTCCGAAGCATCTTCTCAGGCCAAAGCGGCATTACCCGTGAATCTGTCTTCTCCGCCACAGCATGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 90 bp ATGCCGGCATGTAGTCCATCCTGGGAGGGGAGAAATCTTCACCACTaGCTGCCTTTCAGCAAGTTCCCCTTGAAATCTGCCGGCAGTGGA +
Preference number: 1 (lower is better)
Translates to: MPACSPSWEGRNLHH*LPFSKFPLKSAGSG
Trigger: TCCACTGCCGGCAGATTTCAAGGGGAACTTGCTGAAAGGCAGCCAGTGGTGAAGATTTCTCCCCTCCCAGGATGGACTACATGCCGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp AGGGGAGAAATCTTCACCACTGGCTGCCTTTCAGCAAGTTCCCCTTaGAATCTGCCGGCAGTGGAACAGATCCCAGATCCCAACGCTGTA +
Preference number: 1 (lower is better)
Translates to: RGEIFTTGCLSASSP*NLPAVEQIPDPNAV
Trigger: TACAGCGTTGGGATCTGGGATCTGTTCCACTGCCGGCAGATTTCAAGGGGAACTTGCTGAAAGGCAGCCAGTGGTGAAGATTTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 90 bp TTACAGTCTGATTGTGCAGGTAAAGATCGTGTCCTCTCACCGGACTaGATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTG +
Preference number: 1 (lower is better)
Translates to: LQSDCAGKDRVLSPD*ILLPLRLQCLRSTV
Trigger: CACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACGATCTTTACCTGCACAATCAGACTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 90 bp TCACTGACATGGCCCAGCTATATTAACAGACTGCGCCTCAAACCATaGTGTGGCGGAGAAGACAGATTCACGGGTAATGCCGCTTTGGCC +
Preference number: 1 (lower is better)
Translates to: SLTWPSYINRLRLKP*CGGEDRFTGNAALA
Trigger: GGCCAAAGCGGCATTACCCGTGAATCTGTCTTCTCCGCCACAGCATGGTTTGAGGCGCAGTCTGTTAATATAGCTGGGCCATGTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp CTAACAGGAAACAGGCTTCTATGGAAGAGAAGAGTCCCAGCCCCCTaGCCTTTCCGCTTTGGTCTTGGAGGATCTGAGTCACATCTGCCA +
Preference number: 1 (lower is better)
Translates to: LTGNRLLWKRRVPAP*PFRFGLGGSESHLP
Trigger: TGGCAGATGTGACTCAGATCCTCCAAGACCAAAGCGGAAAGGTCAGGGGGCTGGGACTCTTCTCTTCCATAGAAGCCTGTTTCCTGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp CAATTACTGCAAAATCCACAGGTGGCGGTTAATATAAATGGAACTTaGGCTCTGTCCATCAGGGAAGCGCCAAGACCAGGGCCCCCTCCA +
Preference number: 1 (lower is better)
Translates to: QLLQNPQVAVNINGT*ALSIREAPRPGPPP
Trigger: TGGAGGGGGCCCTGGTCTTGGCGCTTCCCTGATGGACAGAGCTCAAGTTCCATTTATATTAACCGCCACCTGTGGATTTTGCAGTAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp CCAGTGCGGCTGAGACAACAGAGTAAAAAGGTTTGTGGAGAACACTaGCGAGTACCTTCCACTTCCAACTATGGCTTCTTCAGCCCCTCC +
Preference number: 1 (lower is better)
Translates to: PVRLRQQSKKVCGEH*RVPSTSNYGFFSPS
Trigger: GGAGGGGCTGAAGAAGCCATAGTTGGAAGTGGAAGGTACTCGTCAGTGTTCTCCACAAACCTTTTTACTCTGTTGTCTCAGCCGCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 90 bp CATGCATATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATaGCTTGCTCTACCACGTCCCGCGACTGCAAACTCCCTTCCTCTG +
Preference number: 1 (lower is better)
Translates to: HAYVASARSNLKTQE*LALPRPATANSLPL
Trigger: CAGAGGAAGGGAGTTTGCAGTCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATATGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 90 bp GAATTAAGGAAAAGGCCAGGGAGACCATCTTCATTCTGCTTCTGCTaGAAACCTCTAAAACTTTCTGACGAGGCTCCCACACGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: ELRKRPGRPSSFCFC*KPLKLSDEAPTRPA
Trigger: GGCAGGGCGTGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGATGGTCTCCCTGGCCTTTTCCTTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 90 bp AAAGGTTTGTGGAGAACACTGACGAGTACCTTCCACTTCCAACTATaGCTTCTTCAGCCCCTCCTGGGAGCATTCTCCCTTGAAGATGTC +
Preference number: 1 (lower is better)
Translates to: KGLWRTLTSTFHFQL*LLQPLLGAFSLEDV
Trigger: GACATCTTCAAGGGAGAATGCTCCCAGGAGGGGCTGAAGAAGCCATAGTTGGAAGTGGAAGGTACTCGTCAGTGTTCTCCACAAACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp AAGAGTCCCAGCCCCCTGACCTTTCCGCTTTGGTCTTGGAGGATCTaGGTCACATCTGCCATGTTGCCTAAAGAATTAGTTGAGTCTCTT +
Preference number: 1 (lower is better)
Translates to: KSPSPLTFPLWSWRI*VTSAMLPKELVESL
Trigger: AAGAGACTCAACTAATTCTTTAGGCAACATGGCAGATGTGACTCAGATCCTCCAAGACCAAAGCGGAAAGGTCAGGGGGCTGGGACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp CTTAACCCTTATGGCATGCATATGTGGCTTCTGCAAGAAGCAACTTaGAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCGACTGCAA +
Preference number: 1 (lower is better)
Translates to: LNPYGMHMWLLQEAT*KPKNALLYHVPRLQ
Trigger: TTGCAGTCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATATGCATGCCATAAGGGTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 90 bp CAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCGACTaGAAACTCCCTTCCTCTGAAACAAGCAGCCACAGCTTTATAAGA +
Preference number: 1 (lower is better)
Translates to: QLENPRMPCSTTSRD*KLPSSETSSHSFIR
Trigger: TCTTATAAAGCTGTGGCTGCTTGTTTCAGAGGAAGGGAGTTTGCAGTCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 90 bp ATATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTaGTCTACCACGTCCCGCGACTGCAAACTCCCTTCCTCTGAAACA +
Preference number: 1 (lower is better)
Translates to: ICGFCKKQLENPRMP*STTSRDCKLPSSET
Trigger: TGTTTCAGAGGAAGGGAGTTTGCAGTCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 90 bp CTGGTTACGATCCCAGGAATCCAGTGTAACCTGGATAAGCAGGGCTaGCTGGAGACGATACTGAGCATTTCCGAATGGAGATTATTGTGT +
Preference number: 1 (lower is better)
Translates to: LVTIPGIQCNLDKQG*LETILSISEWRLLC
Trigger: ACACAATAATCTCCATTCGGAAATGCTCAGTATCGTCTCCAGCCAGCCCTGCTTATCCAGGTTACACTGGATTCCTGGGATCGTAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 90 bp TTGTTCCGAAAGATGCCTCTGCCTTTGTGGGGTCATCTTCCATTATaGCTCCTAACAGGAAACAGGCTTCTATGGAAGAGAAGAGTCCCA +
Preference number: 1 (lower is better)
Translates to: LFRKMPLPLWGHLPL*LLTGNRLLWKRRVP
Trigger: TGGGACTCTTCTCTTCCATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGCAGAGGCATCTTTCGGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 90 bp CCCTCTGACCTCAAATTAAATTGGCTGTCAAAGACTTACGGCCCATaGAGCTCCCAGGTGACAGTGTCAATGGCGCTTTATGTAAGTTCT +
Preference number: 1 (lower is better)
Translates to: PSDLKLNWLSKTYGP*SSQVTVSMALYVSS
Trigger: AGAACTTACATAAAGCGCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTTAATTTGAGGTCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp TTTAGGGGCCATTCAGTGGCACGTTTCCTGCTAAAACAACTCTGCTaGAAATGTCTGAGGTCCTTCTCAAACAGCCACTGGCTTTGTGAT +
Preference number: 1 (lower is better)
Translates to: FRGHSVARFLLKQLC*KCLRSFSNSHWLCD
Trigger: ATCACAAAGCCAGTGGCTGTTTGAGAAGGACCTCAGACATTTTCAGCAGAGTTGTTTTAGCAGGAAACGTGCCACTGAATGGCCCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp AGGAAAAGTGTTCAAACAGTGCTGACTGTGTACCTCAAGGCCCTCTaGCCTCAAATTAAATTGGCTGTCAAAGACTTACGGCCCATGGAG +
Preference number: 1 (lower is better)
Translates to: RKSVQTVLTVYLKAL*PQIKLAVKDLRPME
Trigger: CTCCATGGGCCGTAAGTCTTTGACAGCCAATTTAATTTGAGGTCAGAGGGCCTTGAGGTACACAGTCAGCACTGTTTGAACACTTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 90 bp GCAGAACGTACACAAGCTTTATTGGGCAACAGCAACGAGCCACGCTaGCAAACAATGAAAGTAGAGTCGCTCAGAAACACGAAAGATCAT +
Preference number: 1 (lower is better)
Translates to: AERTQALLGNSNEPR*QTMKVESLRNTKDH
Trigger: ATGATCTTTCGTGTTTCTGAGCGACTCTACTTTCATTGTTTGCCAGCGTGGCTCGTTGCTGTTGCCCAATAAAGCTTGTGTACGTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp GAATCCAGTGTAACCTGGATAAGCAGGGCTGGCTGGAGACGATACTaGGCATTTCCGAATGGAGATTATTGTGTGGATAACTTTTTACCA +
Preference number: 1 (lower is better)
Translates to: ESSVTWISRAGWRRY*AFPNGDYCVDNFLP
Trigger: TGGTAAAAAGTTATCCACACAATAATCTCCATTCGGAAATGCTCAGTATCGTCTCCAGCCAGCCCTGCTTATCCAGGTTACACTGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp CACAAGCCTTCTACAACCTTCAGCTACACAGAAACTTTTATCATGTaGCAACAAAATTCAAGTCATAAGGAAGCTCGCACAGTGACCCAT +
Preference number: 1 (lower is better)
Translates to: HKPSTTFSYTETFIM*QQNSSHKEARTVTH
Trigger: ATGGGTCACTGTGCGAGCTTCCTTATGACTTGAATTTTGTTGTCACATGATAAAAGTTTCTGTGTAGCTGAAGGTTGTAGAAGGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 90 bp AAACGGAGGCTTAAAAACTTCCAGCACAAATTTCTCCTCCACCTTTaGAAACACAGAAACTCACTCAATGAATACGTCAGATTTGCTCAA +
Preference number: 1 (lower is better)
Translates to: KRRLKNFQHKFLLHL*KHRNSLNEYVRFAQ
Trigger: TTGAGCAAATCTGACGTATTCATTGAGTGAGTTTCTGTGTTTTCAAAGGTGGAGGAGAAATTTGTGCTGGAAGTTTTTAAGCCTCCGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCCCCAACGCTGTAGCTTaGGCGTCCTCCCACCAGGGG +
Preference number: 2 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAPNAVA*ASSHQG
Trigger: CCCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGG...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGACCCAACGCTGTAGCTTaGGCGTCCTCCCACCAGGGG +
Preference number: 2 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRPNAVA*ASSHQG
Trigger: CCCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGG...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAGACCCTCCCTCCCGTTaGTGCAGCGTTAGGACTCCG +
Preference number: 2 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRDPPSR*CSVRTP
Trigger: CGGAGTCCTAACGCTGCATCAACGGGAGGGAGGGTC...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGGCTCCCACACGCCCTaGCTGCAGGAGCCAGCATCC +
Preference number: 2 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGGSHTP*LQEPAS
Trigger: GGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGTACTTCTCACCCTTaGCCGCCTCCGCCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAGTSHP*PPPPQC
Trigger: GCACTGGGGCGGAGGCGGTCAAGGGTGAGAAGTACC...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCCAGCCAGCTGCCCACTaGTGGGATGGGCCAACGACG +
Preference number: 2 (lower is better)
Translates to: LRCALGMPSKQLELVPPVQPAAH*WDGPTT
Trigger: CGTCGTTGGCCCATCCCATCAGTGGGCAGCTGGCTG...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAGGCTCCCACACGCCCTaGCTGCAGGAGCCAGCATCC +
Preference number: 2 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLGSHTP*LQEPAS
Trigger: GGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCC...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTTCAGGGACCGTCCAGTaGATGGCGTCAGCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: REVCSNFKMRPWDAFQAASGTVQ*MASASC
Trigger: GCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGA...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGATGCCCACTGATGGGATaGGCCAACGACGTGGCAGTT +
Preference number: 2 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRCPLMG*ANDVAV
Trigger: AACTGCCACGTCGTTGGCCCATCCCATCAGTGGGCA...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGTACCCAGGCGCCCCTaGGGTTCTCTGCTGGGCTTA +
Preference number: 2 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAVPRRP*GSLLGL
Trigger: TAAGCCCAGCAGAGAACCCCAGGGGCGCCTGGGTAC...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGTACCCAGGCGCCCCTaGGGTTCTCTGCTGGGCTTA +
Preference number: 2 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGVPRRP*GSLLGL
Trigger: TAAGCCCAGCAGAGAACCCCAGGGGCGCCTGGGTAC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CAA 90 bp AAATCTGCCGGCAGTGGAACAGATCCCAGATCCCAACGCTGTAGCTaGGGCGTCCTCCCACCAGGGGTTCCTTGTTCTGAAAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: KSAGSGTDPRSQRCS*GVLPPGVPCSESCH
Trigger: GTGGCAGCTTTCAGAACAAGGAACCCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGGATCTGGGATCTGTTCCACTGCCGGCAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGATCAGACAGGCCCAGATaGGTCTCTTTCAGGACCCTC +
Preference number: 2 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRSDRPR*VSFRTL
Trigger: GAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGA...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CAA 90 bp CCAACGACGTGGCAGTTTGCACTTGAGTGTCGGTACTTCTCACCCTaGACCGCCTCCGCCCCAGTGCGGCTGAGACAACAGAGTAAAAAG +
Preference number: 2 (lower is better)
Translates to: PTTWQFALECRYFSP*TASAPVRLRQQSKK
Trigger: CTTTTTACTCTGTTGTCTCAGCCGCACTGGGGCGGAGGCGGTCAAGGGTGAGAAGTACCGACACTCAAGTGCAAACTGCCACGTCGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CAA 90 bp GCAGGTAAAGATCGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTaGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: AGKDRVLSPDCILLP*RLQCLRSTVCAFLG
Trigger: ACCTAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACGATCTTTACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGCGGGATCACACCTCTaGAATTCTTTTACGAGGTGG +
Preference number: 2 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAAGSHL*NSFTRW
Trigger: CCACCTCGTAAAAGAATTTCAGAGGTGTGATCCCGC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTGTTGTTCCGAAAGATaGCTCTGCCTTTGTGGGGTC +
Preference number: 2 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAACCSER*LCLCGV
Trigger: GACCCCACAAAGGCAGAGGCATCTTTCGGAACAACA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGCCCCTGGGGTTCTCTaGTGGGCTTACAGTCTGATT +
Preference number: 2 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAAPGVL*WAYSLI
Trigger: AATCAGACTGTAAGCCCAGCAGAGAACCCCAGGGGC...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGGAAACAGGCTTCTATaGAAGAGAAGAGTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAGNRLL*KRRVPA
Trigger: GGCTGGGACTCTTCTCTTCCATAGAAGCCTGTTTCC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGCATGTAGTCCATCCTaGGAGGGGAGAAATCTTCAC +
Preference number: 2 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAACSPS*EGRNLH
Trigger: GTGAAGATTTCTCCCCTCCCAGGATGGACTACATGC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CAA 90 bp GAGGGGAGAAATCTTCACCACTGGCTGCCTTTCAGCAAGTTCCCCTaGAAATCTGCCGGCAGTGGAACAGATCCCAGATCCCAACGCTGT +
Preference number: 2 (lower is better)
Translates to: EGRNLHHWLPFSKFP*KSAGSGTDPRSQRC
Trigger: ACAGCGTTGGGATCTGGGATCTGTTCCACTGCCGGCAGATTTCAAGGGGAACTTGCTGAAAGGCAGCCAGTGGTGAAGATTTCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCTTTCTCCTCCACCTTTaGAAACACAGAAACTCACTC +
Preference number: 2 (lower is better)
Translates to: FLTRLPHALPAGASIPNLFLLHL*KHRNSL
Trigger: GAGTGAGTTTCTGTGTTTTCAAAGGTGGAGGAGAAA...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCCCACCACAACTAAGATaGCCTCCGAGAAGTACCCAG +
Preference number: 2 (lower is better)
Translates to: LRCALGMPSKQLELVPPVPPQLR*PPRSTQ
Trigger: CTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGG...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGTTCCCCTTGAAATCTaGCGGCAGTGGAACAGATCC +
Preference number: 2 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGVPLEI*RQWNRS
Trigger: GGATCTGTTCCACTGCCGGCAGATTTCAAGGGGAAC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGAAATCTGCCGGCAGTaGAACAGATCCCAGATCCCA +
Preference number: 2 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAEICRQ*NRSQIP
Trigger: TGGGATCTGGGATCTGTTCCACTGCCGGCAGATTTC...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCTCCCTCTGGCAGAAATaGCTGAATCAGATAGAGAAA +
Preference number: 2 (lower is better)
Translates to: FLTRLPHALPAGASIPNLSLWQK*LNQIEK
Trigger: TTTCTCTATCTGATTCAGCCATTTCTGCCAGAGGGA...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCTTCTTCAGCCCCTCCTaGGAGCATTCTCCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGFFSPS*EHSPLK
Trigger: CTTCAAGGGAGAATGCTCCCAGGAGGGGCTGAAGAA...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCCCTGGGGTTCTCTGCTaGGCTTACAGTCTGATTGTG +
Preference number: 2 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGPGVLC*AYSLIV
Trigger: CACAATCAGACTGTAAGCCCAGCAGAGAACCCCAGG...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCAATATAAATGGAACTTaGGCTCTGTCCATCAGGGAA +
Preference number: 2 (lower is better)
Translates to: FLTRLPHALPAGASIPNLNINGT*ALSIRE
Trigger: TTCCCTGATGGACAGAGCTCAAGTTCCATTTATATT...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAGGTCATCTTCCATTATaGCTCCTAACAGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRGHLPL*LLTGNR
Trigger: CCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACC...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCATCTTCACCACTGGCTaGCTTTCAGCAAGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: LRCALGMPSKQLELVPPVIFTTG*LSASSP
Trigger: AGGGGAACTTGCTGAAAGGCAGCCAGTGGTGAAGAT...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCTGCATATGTGGCTTCTaGAAGAAGCAACTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: FLTRLPHALPAGASIPNLCICGF*KKQLEN
Trigger: GTTTTCAAGTTGCTTCTTGCAGAAGCCACATATGCA...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTCAATACATCTTTTCTaGCGACCTTTTCCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAASIHLF*RPFPSG
Trigger: GCCAGAGGGAAAAGGTCGGCAGAAAAGATGTATTGA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGAAATCTTCACCACTaGCTGCCTTTCAGCAAGTTC +
Preference number: 2 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRRNLHH*LPFSKF
Trigger: GAACTTGCTGAAAGGCAGCCAGTGGTGAAGATTTCT...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCCCGACCTTTTCCCTCTaGCAGAAATGGCTGAATCAG +
Preference number: 2 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGPTFSL*QKWLNQ
Trigger: CTGATTCAGCCATTTCTGCCAGAGGGAAAAGGTCGG...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCTTCCACTTCCAACTATaGCTTCTTCAGCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: LRCALGMPSKQLELVPPVFHFQL*LLQPLL
Trigger: CAGGAGGGGCTGAAGAAGCCATAGTTGGAAGTGGAA...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTATAAATCTCCCAGCTaGGCCACCAGCTTTAACATA +
Preference number: 2 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAYKSPS*ATSFNI
Trigger: TATGTTAAAGCTGGTGGCTCAGCTGGGAGATTTATA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCTCAGAAACCAGGCTGTaGTGTACATCTCTGAAGCAC +
Preference number: 2 (lower is better)
Translates to: LRCALGMPSKQLELVPPVSETRL*CTSLKH
Trigger: GTGCTTCAGAGATGTACATCACAGCCTGGTTTCTGA...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATACCTCTAAAACTTTCTaGCGAGGCTCCCACACGCCC +
Preference number: 2 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNTSKTF*RGSHTP
Trigger: GGGCGTGTGGGAGCCTCGTCAGAAAGTTTTAGAGGT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCACTGGATAAGCAGGGCTaGCTGGAGACGATACTGAGC +
Preference number: 2 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPLDKQG*LETILS
Trigger: GCTCAGTATCGTCTCCAGCCAGCCCTGCTTATCCAG...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAGGAAACAGGCTTCTATaGAAGAGAAGAGTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLGNRLL*KRRVPA
Trigger: GGCTGGGACTCTTCTCTTCCATAGAAGCCTGTTTCC...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCATGCCTCTGCCTTTGTaGGGTCATCTTCCATTATGC +
Preference number: 2 (lower is better)
Translates to: LRCALGMPSKQLELVPPVMPLPL*GHLPLC
Trigger: GCATAATGGAAGATGACCCCACAAAGGCAGAGGCAT...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGACCCTCCCTCCCGTTaGTGCAGCGTTAGGACTCCG +
Preference number: 2 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFDPPSR*CSVRTP
Trigger: CGGAGTCCTAACGCTGCATCAACGGGAGGGAGGGTC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCCAGAAACTCACTCAATaGATACGTCAGATTTGCTCA +
Preference number: 2 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAQKLTQ*IRQICS
Trigger: TGAGCAAATCTGACGTATTCATTGAGTGAGTTTCTG...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTGCGTCTCCAGTGTCTaGGAAGCACGGTGTGTGCAT +
Preference number: 2 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGCVSSV*EARCVH
Trigger: ATGCACACACCGTGCTTCTCAGACACTGGAGACGCA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAGGCTGGAGACGATACTaGGCATTTCCGAATGGAGAT +
Preference number: 2 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPGWRRY*AFPNGD
Trigger: ATCTCCATTCGGAAATGCTCAGTATCGTCTCCAGCC...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCCTAAAACAACTCTGCTaGAAATGTCTGAGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: LRCALGMPSKQLELVPPVLKQLC*KCLRSF
Trigger: GAAGGACCTCAGACATTTTCAGCAGAGTTGTTTTAG...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAACCACGTCCCGCGACTaGAAACTCCCTTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTTTSRD*KLPSSE
Trigger: TTCAGAGGAAGGGAGTTTGCAGTCGCGGGACGTGGT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCGAAATCTGCCGGCAGTaGAACAGATCCCAGATCCCA +
Preference number: 2 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGEICRQ*NRSQIP
Trigger: TGGGATCTGGGATCTGTTCCACTGCCGGCAGATTTC...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCAATATAAATGGAACTTaGGCTCTGTCCATCAGGGAA +
Preference number: 2 (lower is better)
Translates to: LRCALGMPSKQLELVPPVNINGT*ALSIRE
Trigger: TTCCCTGATGGACAGAGCTCAAGTTCCATTTATATT...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTACACACTATGGATGCTaGATCAGATCAAGGATAACA +
Preference number: 2 (lower is better)
Translates to: REVCSNFKMRPWDAFQAATHYGC*IRSRIT
Trigger: TGTTATCCTTGATCTGATTCAGCATCCATAGTGTGT...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTACTAAAACAACTCTGCTaGAAATGTCTGAGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLLKQLC*KCLRSF
Trigger: GAAGGACCTCAGACATTTTCAGCAGAGTTGTTTTAG...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAAGGGGTTCCTTGTTCTaGAAGCTGCCACCAGTGTTG +
Preference number: 2 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTRGSLF*KLPPVL
Trigger: CAACACTGGTGGCAGCTTTCAGAACAAGGAACCCCT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAAGACCATCTTCATTCTaGTTCTGCTGGAAACCTCTA +
Preference number: 2 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLRPSSF*FCWKPL
Trigger: TAGAGGTTTCCAGCAGAAGCAGAATGAAGATGGTCT...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACTGGATAAGCAGGGCTaGCTGGAGACGATACTGAGC +
Preference number: 2 (lower is better)
Translates to: YVASARSNLKTQECLALPLDKQG*LETILS
Trigger: GCTCAGTATCGTCTCCAGCCAGCCCTGCTTATCCAG...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTATATGGCATGCATATGTaGCTTCTGCAAGAAGCAACT +
Preference number: 2 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLYGMHM*LLQEAT
Trigger: AGTTGCTTCTTGCAGAAGCCACATATGCATGCCATA...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCACCTCAATCAAAATTaGGAATTAAGGAAAAGGCCA +
Preference number: 2 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAHLNQN*ELRKRP
Trigger: TGGCCTTTTCCTTAATTCTCAATTTTGATTGAGGTG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTTGTGTTAGCAATTACTaGAAAATCCACAGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: PCSESCHQCCSERCLCLCCVSNY*KIHRWR
Trigger: CCGCCACCTGTGGATTTTGCAGTAATTGCTAACACA...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCATGTGTTAGCAATTACTaGAAAATCCACAGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPCVSNY*KIHRWR
Trigger: CCGCCACCTGTGGATTTTGCAGTAATTGCTAACACA...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCTCAGACAGGCCCAGATaGGTCTCTTTCAGGACCCTC +
Preference number: 2 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFSDRPR*VSFRTL
Trigger: GAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGA...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAGAATCCAGTGTAACCTaGATAAGCAGGGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: YVASARSNLKTQECLALPESSVT*ISRAGW
Trigger: CCAGCCAGCCCTGCTTATCCAGGTTACACTGGATTC...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTTTAACTCACACACTATaGATGCTGAATCAGATCAAG +
Preference number: 2 (lower is better)
Translates to: REVCSNFKMRPWDAFQAALTHTL*MLNQIK
Trigger: CTTGATCTGATTCAGCATCCATAGTGTGTGAGTTAA...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAGCGGGATCACACCTCTaGAATTCTTTTACGAGGTGG +
Preference number: 2 (lower is better)
Translates to: YVASARSNLKTQECLALPAGSHL*NSFTRW
Trigger: CCACCTCGTAAAAGAATTTCAGAGGTGTGATCCCGC...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACACCTTGTTCTGAAAGCTaGCACCAGTGTTGTTCCGAA +
Preference number: 2 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTPCSES*HQCCSE
Trigger: TTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAATCTTCACCACTGGCTaGCTTTCAGCAAGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: YVASARSNLKTQECLALPIFTTG*LSASSP
Trigger: AGGGGAACTTGCTGAAAGGCAGCCAGTGGTGAAGAT...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCAGAAATCTTCACCACTaGCTGCCTTTCAGCAAGTTC +
Preference number: 2 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGRNLHH*LPFSKF
Trigger: GAACTTGCTGAAAGGCAGCCAGTGGTGAAGATTTCT...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTACACACTATGGATGCTaGATCAGATCAAGGATAACA +
Preference number: 2 (lower is better)
Translates to: PCSESCHQCCSERCLCLCTHYGC*IRSRIT
Trigger: TGTTATCCTTGATCTGATTCAGCATCCATAGTGTGT...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR GCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTAACCCAAGAATGCCTTaGTCTACCACGTCCCGCGAC +
Preference number: 2 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSNPRMP*STTSRD
Trigger: GTCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTT...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACATCTCCTCTCATTTACTaGTTACGATCCCAGGAATCC +
Preference number: 2 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTSPLIY*LRSQES
Trigger: GGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGA...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAATGCCTCTGCCTTTGTaGGGTCATCTTCCATTATGC +
Preference number: 2 (lower is better)
Translates to: YVASARSNLKTQECLALPMPLPL*GHLPLC
Trigger: GCATAATGGAAGATGACCCCACAAAGGCAGAGGCAT...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTAGGGGTTCCTTGTTCTaGAAGCTGCCACCAGTGTTG +
Preference number: 2 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSRGSLF*KLPPVL
Trigger: CAACACTGGTGGCAGCTTTCAGAACAAGGAACCCCT...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGTTAACTCACACACTATaGATGCTGAATCAGATCAAG +
Preference number: 2 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMLTHTL*MLNQIK
Trigger: CTTGATCTGATTCAGCATCCATAGTGTGTGAGTTAA...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CAA 90 bp TTAACTCACACACTATGGATGCTGAATCAGATCAAGGATAACAGATaGGACTTAGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTT +
Preference number: 2 (lower is better)
Translates to: LTHTLWMLNQIKDNR*DLGHSLSLSSHLLV
Trigger: AACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCTAAGTCCAATCTGTTATCCTTGATCTGATTCAGCATCCATAGTGTGTGAGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAAATTCTTTTACGAGGTaGCAGGTGAAGTTAACTCAC +
Preference number: 2 (lower is better)
Translates to: YVASARSNLKTQECLALPNSFTR*QVKLTH
Trigger: GTGAGTTAACTTCACCTGCCACCTCGTAAAAGAATT...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATAATTCTTTTACGAGGTaGCAGGTGAAGTTAACTCAC +
Preference number: 2 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDNSFTR*QVKLTH
Trigger: GTGAGTTAACTTCACCTGCCACCTCGTAAAAGAATT...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp GCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTaGTGCAGCGTTAGGACTCCGTTTAGGCGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: AQMGLFQDPPSR*CSVRTPFRRRA
Trigger: GGCTCTGCGCCTAAACGGAGTCCTAACGCTGCATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp GGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCCACTaGTGGGATGGGCCAACGACGTGGCAGTTTGCACTT +
Preference number: 3 (lower is better)
Translates to: GPSSEWRQPAAH*WDGPTTWQFAL
Trigger: AAGTGCAAACTGCCACGTCGTTGGCCCATCCCATCAGTGGGCAGCTGGCTGACGCCATTCACTGGACGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCAAACCCAAGAATGCCTaGCTCTACCACGTCCCGCGA +
Preference number: 3 (lower is better)
Translates to: FLTRLPHALPAGASIPNLKPKNA*LYHVPR
Trigger: TCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTT...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp CTGATGGGATGGGCCAACGACGTGGCAGTTTGCACTTaGGTGTCGGTACTTCTCACCCTTGACCGCCTCCGC +
Preference number: 3 (lower is better)
Translates to: LMGWANDVAVCT*VSVLLTLDRLR
Trigger: GCGGAGGCGGTCAAGGGTGAGAAGTACCGACACTCAAGTGCAAACTGCCACGTCGTTGGCCCATCCCATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAAGCTGCCACCAGTGTaGTTCCGAAAGATGCCTCTG +
Preference number: 3 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRKLPPV*FRKMPL
Trigger: CAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTT...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATTCCCAACGCTGTAGCTaGGGCGTCCTCCCACCAGGG +
Preference number: 3 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNSQRCS*GVLPPG
Trigger: CCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGGA...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 72 bp GGCGTCCTCCCACCAGGGGTTCCTTGTTCTGAAAGCTaGCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTT +
Preference number: 3 (lower is better)
Translates to: GVLPPGVPCSES*HQCCSERCLCL
Trigger: AAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGGAACCCCTGGTGGGAGGACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 72 bp CCACTGGCTGCCTTTCAGCAAGTTCCCCTTGAAATCTaGCGGCAGTGGAACAGATCCCAGATCCCAACGCTG +
Preference number: 3 (lower is better)
Translates to: PLAAFQQVPLEI*RQWNRSQIPTL
Trigger: CAGCGTTGGGATCTGGGATCTGTTCCACTGCCGGCAGATTTCAAGGGGAACTTGCTGAAAGGCAGCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 72 bp ACCTCCGAGAAGTACCCAGGCGCCCCTGGGGTTCTCTaGTGGGCTTACAGTCTGATTGTGCAGGTAAAGATC +
Preference number: 3 (lower is better)
Translates to: TSEKYPGAPGVL*WAYSLIVQVKI
Trigger: GATCTTTACCTGCACAATCAGACTGTAAGCCCAGCAGAGAACCCCAGGGGCGCCTGGGTACTTCTCGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 72 bp GCAGTGGAACAGATCCCAGATCCCAACGCTGTAGCTTaGGCGTCCTCCCACCAGGGGTTCCTTGTTCTGAAA +
Preference number: 3 (lower is better)
Translates to: AVEQIPDPNAVA*ASSHQGFLVLK
Trigger: TTTCAGAACAAGGAACCCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGGATCTGGGATCTGTTCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 72 bp TCCGAGAAGTACCCAGGCGCCCCTGGGGTTCTCTGCTaGGCTTACAGTCTGATTGTGCAGGTAAAGATCGTG +
Preference number: 3 (lower is better)
Translates to: SEKYPGAPGVLC*AYSLIVQVKIV
Trigger: CACGATCTTTACCTGCACAATCAGACTGTAAGCCCAGCAGAGAACCCCAGGGGCGCCTGGGTACTTCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCAGATCTCAACCACACTaGGCTCTTAAAGATCCACCA +
Preference number: 3 (lower is better)
Translates to: FLTRLPHALPAGASIPNLRSQPH*ALKDPP
Trigger: TGGTGGATCTTTAAGAGCCAAGTGTGGTTGAGATCT...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 72 bp CCTGAGAAGATGCTTCGGAGCTCCAGGTGGAGGAGCTaGTCACGCTGCAGGATGCTTTGCAGGTTCATTCAA +
Preference number: 3 (lower is better)
Translates to: PEKMLRSSRWRS*SRCRMLCRFIQ
Trigger: TTGAATGAACCTGCAAAGCATCCTGCAGCGTGAGCAGCTCCTCCACCTGGAGCTCCGAAGCATCTTCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCAGCCAGGTACAGGGTTaGCAAAGTCTAAACAGGACT +
Preference number: 3 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAASQVQG*QSLNRT
Trigger: AGTCCTGTTTAGACTTTGCAAACCCTGTACCTGGCT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp ATCTTCACCACTGGCTGCCTTTCAGCAAGTTCCCCTTaGAATCTGCCGGCAGTGGAACAGATCCCAGATCCC +
Preference number: 3 (lower is better)
Translates to: IFTTGCLSASSP*NLPAVEQIPDP
Trigger: GGGATCTGGGATCTGTTCCACTGCCGGCAGATTTCAAGGGGAACTTGCTGAAAGGCAGCCAGTGGTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCATCCCAACGCTGTAGCTaGGGCGTCCTCCCACCAGGG +
Preference number: 3 (lower is better)
Translates to: YVASARSNLKTQECLALPSQRCS*GVLPPG
Trigger: CCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGGA...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp AACAGGCTTCTATGGAAGAGAAGAGTCCCAGCCCCCTaGCCTTTCCGCTTTGGTCTTGGAGGATCTGAGTCA +
Preference number: 3 (lower is better)
Translates to: NRLLWKRRVPAP*PFRFGLGGSES
Trigger: TGACTCAGATCCTCCAAGACCAAAGCGGAAAGGTCAGGGGGCTGGGACTCTTCTCTTCCATAGAAGCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 72 bp GTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATaGCTTGCTCTACCACGTCCCGCGACTGCAAACTCC +
Preference number: 3 (lower is better)
Translates to: VASARSNLKTQE*LALPRPATANS
Trigger: GGAGTTTGCAGTCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 72 bp TGGCCCAGCTATATTAACAGACTGCGCCTCAAACCATaGTGTGGCGGAGAAGACAGATTCACGGGTAATGCC +
Preference number: 3 (lower is better)
Translates to: WPSYINRLRLKP*CGGEDRFTGNA
Trigger: GGCATTACCCGTGAATCTGTCTTCTCCGCCACAGCATGGTTTGAGGCGCAGTCTGTTAATATAGCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCAAGATGCCTCTGCCTTaGTGGGGTCATCTTCCATTA +
Preference number: 3 (lower is better)
Translates to: LRCALGMPSKQLELVPPVKMPLP*WGHLPL
Trigger: TAATGGAAGATGACCCCACAAAGGCAGAGGCATCTT...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCCGCCAGGCAGAGGGTTaGAAGGATATGTATTCATCA +
Preference number: 3 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGRQAEG*KDMYSS
Trigger: TGATGAATACATATCCTTCAAACCCTCTGCCTGGCG...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAAGCCAGGTACAGGGTTaGCAAAGTCTAAACAGGACT +
Preference number: 3 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLSQVQG*QSLNRT
Trigger: AGTCCTGTTTAGACTTTGCAAACCCTGTACCTGGCT...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR GCA 72 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTaGTCTACCACGTCCCGCGACTGCAAACTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: FCKKQLENPRMP*STTSRDCKLPS
Trigger: GGAAGGGAGTTTGCAGTCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 72 bp ATCCCAGGAATCCAGTGTAACCTGGATAAGCAGGGCTaGCTGGAGACGATACTGAGCATTTCCGAATGGAGA +
Preference number: 3 (lower is better)
Translates to: IPGIQCNLDKQG*LETILSISEWR
Trigger: TCTCCATTCGGAAATGCTCAGTATCGTCTCCAGCCAGCCCTGCTTATCCAGGTTACACTGGATTCCTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 72 bp CTGTGTACCTCAAGGCCCTCTGACCTCAAATTAAATTaGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: LCTSRPSDLKLN*LSKTYGPWSSQ
Trigger: CTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTTAATTTGAGGTCAGAGGGCCTTGAGGTACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTCTTTCCGCTTTGGTCTaGGAGGATCTGAGTCACATC +
Preference number: 3 (lower is better)
Translates to: PCSESCHQCCSERCLCLCLSALV*EDLSHI
Trigger: GATGTGACTCAGATCCTCCAAGACCAAAGCGGAAAG...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCCGTGGCAGTTTGCACTaGAGTGTCGGTACTTCTCAC +
Preference number: 3 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGRGSLH*SVGTSH
Trigger: GTGAGAAGTACCGACACTCAAGTGCAAACTGCCACG...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp CAAAATCCACAGGTGGCGGTTAATATAAATGGAACTTaGGCTCTGTCCATCAGGGAAGCGCCAAGACCAGGG +
Preference number: 3 (lower is better)
Translates to: QNPQVAVNINGT*ALSIREAPRPG
Trigger: CCCTGGTCTTGGCGCTTCCCTGATGGACAGAGCTCAAGTTCCATTTATATTAACCGCCACCTGTGGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 72 bp CCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTaGGGTCATCTTCCATTATGCCTCCTAACAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PPVLFRKMPLPL*GHLPLCLLTGN
Trigger: GTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 72 bp AGCTTTATAAGAAACATGCCGGCATGTAGTCCATCCTaGGAGGGGAGAAATCTTCACCACTGGCTGCCTTTC +
Preference number: 3 (lower is better)
Translates to: SFIRNMPACSPS*EGRNLHHWLPF
Trigger: GAAAGGCAGCCAGTGGTGAAGATTTCTCCCCTCCCAGGATGGACTACATGCCGGCATGTTTCTTATAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 72 bp CCTTCCACTTCCAACTATGGCTTCTTCAGCCCCTCCTaGGAGCATTCTCCCTTGAAGATGTCAATCAGTATC +
Preference number: 3 (lower is better)
Translates to: PSTSNYGFFSPS*EHSPLKMSISI
Trigger: GATACTGATTGACATCTTCAAGGGAGAATGCTCCCAGGAGGGGCTGAAGAAGCCATAGTTGGAAGTGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp AGCCCCCTGACCTTTCCGCTTTGGTCTTGGAGGATCTaGGTCACATCTGCCATGTTGCCTAAAGAATTAGTT +
Preference number: 3 (lower is better)
Translates to: SPLTFPLWSWRI*VTSAMLPKELV
Trigger: AACTAATTCTTTAGGCAACATGGCAGATGTGACTCAGATCCTCCAAGACCAAAGCGGAAAGGTCAGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 72 bp ACACAAGCTTTATTGGGCAACAGCAACGAGCCACGCTaGCAAACAATGAAAGTAGAGTCGCTCAGAAACACG +
Preference number: 3 (lower is better)
Translates to: TQALLGNSNEPR*QTMKVESLRNT
Trigger: CGTGTTTCTGAGCGACTCTACTTTCATTGTTTGCCAGCGTGGCTCGTTGCTGTTGCCCAATAAAGCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACCTGACCTTTCCGCTTaGGTCTTGGAGGATCTGAGT +
Preference number: 3 (lower is better)
Translates to: YVASARSNLKTQECLALPPDLSA*VLEDLS
Trigger: ACTCAGATCCTCCAAGACCAAAGCGGAAAGGTCAGG...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCAAGATGCCTCTGCCTTaGTGGGGTCATCTTCCATTA +
Preference number: 3 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGKMPLP*WGHLPL
Trigger: TAATGGAAGATGACCCCACAAAGGCAGAGGCATCTT...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTATCAAGGATAACAGATaGGACTTAGGACACTCTCTC +
Preference number: 3 (lower is better)
Translates to: PCSESCHQCCSERCLCLCIKDNR*DLGHSL
Trigger: GAGAGAGTGTCCTAAGTCCAATCTGTTATCCTTGAT...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp GTAACCTGGATAAGCAGGGCTGGCTGGAGACGATACTaGGCATTTCCGAATGGAGATTATTGTGTGGATAAC +
Preference number: 3 (lower is better)
Translates to: VTWISRAGWRRY*AFPNGDYCVDN
Trigger: GTTATCCACACAATAATCTCCATTCGGAAATGCTCAGTATCGTCTCCAGCCAGCCCTGCTTATCCAGGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp CATTCAGTGGCACGTTTCCTGCTAAAACAACTCTGCTaGAAATGTCTGAGGTCCTTCTCAAACAGCCACTGG +
Preference number: 3 (lower is better)
Translates to: HSVARFLLKQLC*KCLRSFSNSHW
Trigger: CCAGTGGCTGTTTGAGAAGGACCTCAGACATTTTCAGCAGAGTTGTTTTAGCAGGAAACGTGCCACTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CCA 72 bp CTCAAATTAAATTGGCTGTCAAAGACTTACGGCCCATaGAGCTCCCAGGTGACAGTGTCAATGGCGCTTTAT +
Preference number: 3 (lower is better)
Translates to: LKLNWLSKTYGP*SSQVTVSMALY
Trigger: ATAAAGCGCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTTAATTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCGTCACATCTGCCATGTaGCCTAAAGAATTAGTTGAG +
Preference number: 3 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGVTSAM*PKELVE
Trigger: CTCAACTAATTCTTTAGGCAACATGGCAGATGTGAC...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAAGATCTCAACCACACTaGGCTCTTAAAGATCCACCA +
Preference number: 3 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTRSQPH*ALKDPP
Trigger: TGGTGGATCTTTAAGAGCCAAGTGTGGTTGAGATCT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp GTTCAAACAGTGCTGACTGTGTACCTCAAGGCCCTCTaGCCTCAAATTAAATTGGCTGTCAAAGACTTACGG +
Preference number: 3 (lower is better)
Translates to: VQTVLTVYLKAL*PQIKLAVKDLR
Trigger: CCGTAAGTCTTTGACAGCCAATTTAATTTGAGGTCAGAGGGCCTTGAGGTACACAGTCAGCACTGTTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAGTCACATCTGCCATGTaGCCTAAAGAATTAGTTGAG +
Preference number: 3 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTVTSAM*PKELVE
Trigger: CTCAACTAATTCTTTAGGCAACATGGCAGATGTGAC...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp TTGTTACCAGGTCCCAATAAAGCGGGATCACACCTCTaGAATTCTTTTACGAGGTGGCAGGTGAAGTTAACT +
Preference number: 3 (lower is better)
Translates to: LLPGPNKAGSHL*NSFTRWQVKLT
Trigger: AGTTAACTTCACCTGCCACCTCGTAAAAGAATTTCAGAGGTGTGATCCCGCTTTATTGGGACCTGGTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR-3UTR CAA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATTCTGCAAGAAGCAACTaGAAAACCCAAGAATGCCTT +
Preference number: 3 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDSARSN*KTQECL
Trigger: AAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGA...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR TCA 72 bp CTTAAAAACTTCCAGCACAAATTTCTCCTCCACCTTTaGAAACACAGAAACTCACTCAATGAATACGTCAGA +
Preference number: 3 (lower is better)
Translates to: LKNFQHKFLLHL*KHRNSLNEYVR
Trigger: TCTGACGTATTCATTGAGTGAGTTTCTGTGTTTTCAAAGGTGGAGGAGAAATTTGTGCTGGAAGTTTTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCGGTACTTCTCACCCTTaGCCGCCTCCGCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLGTSHP*PPPPQC
Trigger: GCACTGGGGCGGAGGCGGTCAAGGGTGAGAAGTACC...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCCTTCGTGCACGCGGCTaGTCATGGTCCGCCGGACCT +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLLRARG*SWSAGP
Trigger: AGGTCCGGCGGACCATGAGCAGCCGCGTGCACGAAG...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCCAGTACCTCGTGCTGTaGGCCGGCTGTAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLQYLVL*AGCRPG
Trigger: CCCAGGTCTACAGCCGGCTCACAGCACGAGGTACTG...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311637.9
CDS-3UTR CCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGACGATCTGGGCCTTCTaGGTGGGGGCACATCGGCAG +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMTIWAF*VGAHRQ
Trigger: CTGCCGATGTGCCCCCACCCAGAAGGCCCAGATCGT...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCAGGCGCACGATCTaGGCCTTCTGGGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRSRRTI*AFWVGA
Trigger: TGCCCCCACCCAGAAGGCCCAGATCGTGCGCCTGCT...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGCTTCGGAGCTCCAGGTaGAGGAGCTGCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMLRSSR*RSCSRC
Trigger: GCAGCGTGAGCAGCTCCTCCACCTGGAGCTCCGAAG...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGCGGCCTGCAAAGTGCTaGAGGGCAACCATGACCAGC +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMRPAKC*RATMTS
Trigger: GCTGGTCATGGTTGCCCTTCAGCACTTTGCAGGCCG...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTCACCGTGGCCACTTTaGGGGAGCGGTCGTGCACAC +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAASPWPL*GSGRAH
Trigger: GTGTGCACGACCGCTCCCTCAAAGTGGCCACGGTGA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCGTCTTCGCAGGTACTTaGGGACATAGAGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLVFAGT*GHRGGG
Trigger: GCCTCCCCCTCTATGTCCTCAAGTACCTGCGAAGAC...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGACCCTCCCTCCCGTTaGTGCAGCGTTAGGACTCCG +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAADPPSR*CSVRTP
Trigger: CGGAGTCCTAACGCTGCATCAACGGGAGGGAGGGTC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCGGCTCCCACACGCCCTaGCTGCAGGAGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVGSHTP*LQEPAS
Trigger: GGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCC...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGCTCAGGAATCGTGCTaGAGCGAACCACGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAAQESC*SEPRSR
Trigger: CCGGGACCGTGGTTCGCTCCAGCACGATTCCTGAGC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGCCCTTCTGAGCCGGTaGGTCCTGGGATTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAALLSR*VLGLLG
Trigger: ACCCAGCAATCCCAGGACCCACCGGCTCAGAAGGGC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGGCTAGTTCCAGCACGTaGTCTAATGGCCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMASSST*SNGPRG
Trigger: GCCCCTGGGGCCATTAGACCACGTGCTGGAACTAGC...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCAGCGTTGGGCCCTTCTaGGCCGGTGGGTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVSVGPF*AGGSWD
Trigger: ATCCCAGGACCCACCGGCTCAGAAGGGCCCAACGCT...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCGCACAATGCCAGCCATaGCCACATCTGCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLAQCQP*PHLLPS
Trigger: TGAAGGGAGCAGATGTGGTCATGGCTGGCATTGTGC...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGAATCACGAACTGGCTaGGGGCGGCTGACCGCTTGT +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAESRTG*GRLTAC
Trigger: ACAAGCGGTCAGCCGCCCTCAGCCAGTTCGTGATTC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGAGAGTCCCAGCCCCCTaGCCTTTCCGCTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMRVPAP*PFRFGL
Trigger: AAGACCAAAGCGGAAAGGTCAGGGGGCTGGGACTCT...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCGAAATCCTGCCCAGCTaGTCAGGAATCGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLEILPS*SGIVLE
Trigger: CTCCAGCACGATTCCTGAGCAGCTGGGCAGGATTTC...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGATTGAGGGAGCGGTCGTaGACACTCAGCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRLRERS*TLSLAW
Trigger: CCAGGCCAAGCTGAGTGTGCACGACCGCTCCCTCAA...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCGCCCCTGGGGTTCTCTaGTGGGCTTACAGTCTGATT +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLAPGVL*WAYSLI
Trigger: AATCAGACTGTAAGCCCAGCAGAGAACCCCAGGGGC...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGTCCAGGTGGAGGAGCTaGTCACGCTGCAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMSRWRS*SRCRML
Trigger: AAGCATCCTGCAGCGTGAGCAGCTCCTCCACCTGGA...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCCCAACGCTGTAGCTTaGGCGTCCTCCCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAPNAVA*ASSHQG
Trigger: CCCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGCTAGTTCCAGCACGTaGTCTAATGGCCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAASSST*SNGPRG
Trigger: GCCCCTGGGGCCATTAGACCACGTGCTGGAACTAGC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCTCCATCCGCTTCTTCTaGCGCACCGGCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGSIRFF*RTGCSG
Trigger: CCCGCTGCAGCCGGTGCGCCAGAAGAAGCGGATGGA...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
3UTR CAA 72 bp TGGCAGTTTGCACTTGAGTGTCGGTACTTCTCACCCTaGACCGCCTCCGCCCCAGTGCGGCTGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: WQFALECRYFSP*TASAPVRLRQQ
Trigger: CTGTTGTCTCAGCCGCACTGGGGCGGAGGCGGTCAAGGGTGAGAAGTACCGACACTCAAGTGCAAACTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTTCTCGGCCTCAGCCTaGTCAGTCACACCGTTGGAC +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAFSASA*SVTPLD
Trigger: GTCCAACGGTGTGACTGATCAGGCTGAGGCCGAGAA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTACTGGCTGAGGGCGGCTaGCCGCTTGTAGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLLAEGG*PLVAVP
Trigger: CGGAACAGCTACAAGCGGTCAGCCGCCCTCAGCCAG...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCACAACGGCCGTCCCTTaGGAAGATCCTTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLTTAVP*EDPCRA
Trigger: AGCTCTACAAGGATCTTCTCAAGGGACGGCCGTTGT...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGTGCGTCTCCAGTGTCTaGGAAGCACGGTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMCVSSV*EARCVH
Trigger: ATGCACACACCGTGCTTCTCAGACACTGGAGACGCA...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGCCTTCACGGCTTCGTaGACGCGGCTGCTCATGGTC +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGAFTAS*TRLLMV
Trigger: GACCATGAGCAGCCGCGTGCACGAAGCCGTGAAGGC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCATGGCGTCAGCCAGCTaGCCACTGATGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGMASAS*PLMGWA
Trigger: GGCCCATCCCATCAGTGGGCAGCTGGCTGACGCCAT...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCGCCCTTCTGAGCCGGTaGGTCCTGGGATTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVALLSR*VLGLLG
Trigger: ACCCAGCAATCCCAGGACCCACCGGCTCAGAAGGGC...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCGAATCCAGTGTAACCTaGATAAGCAGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLESSVT*ISRAGW
Trigger: CCAGCCAGCCCTGCTTATCCAGGTTACACTGGATTC...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTGCCCACTGATGGGATaGGCCAACGACGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAACPLMG*ANDVAV
Trigger: AACTGCCACGTCGTTGGCCCATCCCATCAGTGGGCA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCCTTCGGAGCTCCAGGTaGAGGAGCTGCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVLRSSR*RSCSRC
Trigger: GCAGCGTGAGCAGCTCCTCCACCTGGAGCTCCGAAG...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCAGATCTGTAGGATGGTaGAGTTCAGGATCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLRSVGW*SSGSGR
Trigger: GCGACCAGATCCTGAACTTCACCATCCTACAGATCT...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAGCGTTCAGCTCGAGGTaGGCCTCCCCGCGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPAFSSR*ASPRLV
Trigger: GACCAACCGCGGGGAGGCTCACCTCGAGCTGAACGC...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGATACAGAGGCTCCTGTaGATCACGAACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMIQRLL*ITNWLR
Trigger: CCTCAGCCAGTTCGTGATTCACAGGAGCCTCTGTAT...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTGCAAGAGACTTCTTTaGCACCACGAGCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAACKRLL*HHEHPQ
Trigger: CTGCGGGTGCTCGTGGTGGCAAAGAAGTCTCTTGCA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCACTGTCATGAGCCAGTaGCAGGTCTGGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAATVMSQ*QVWMVS
Trigger: GCTGACCATCCAGACCTGGCACTGGCTCATGACAGT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAACCCAAGAATGCCTTaGTCTACCACGTCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRNPRMP*STTSRD
Trigger: GTCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTT...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGGCTCCAACTTTAAGATaGGCCCTTGGGATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMAPTLR*ALGMPS
Trigger: GGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGC...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCAAAGGCACGCACGCATaGCCAGCCTACCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAKGTHA*PAYPSK
Trigger: TTTACTGGGGTAGGCTGGGCATGCGTGCGTGCCTTT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTATTCTGGCGCACCGGCTaGAGCGGGATGTTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLFWRTG*SGMLSV
Trigger: GACGGACAACATCCCGCTGCAGCCGGTGCGCCAGAA...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGGCCGTGGGGAGCCTCTaGGTGCAGGCCACGGGAAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQAVGSL*VQATGS
Trigger: GCTTCCCGTGGCCTGCACGCAGAGGCTCCCCACGGC...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTTCCGAGGATACCTCTaGTCTCTCTTCTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAFRGYL*SLFSGC
Trigger: GCACCCCGAGAAGAGAGACCAGAGGTATCCTCGGAA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCTTAGTGGTGAGCGTTaGGCCCTTCTGAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAALSGER*ALLSRW
Trigger: CCACCGGCTCAGAAGGGCCCAACGCTCACCACTAAG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCACGGGAGTCACGTTGTaGCAGAGCGCGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGTGVTL*QSAMAF
Trigger: GAAGGCCATCGCGCTCTGCCACAACGTGACTCCCGT...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCTCGGGGCTGGATGCCTaGTATACGCGGCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGSGLDA*YTRQES
Trigger: AGACTCCTGCCGCGTATACCAGGCATCCAGCCCCGA...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCGGGTCCTCAGCTGCATaGAAGACTGGTCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVGSSAA*KTGLGP
Trigger: TGGGCCGAGACCAGTCTTCCATGCAGCTGAGGACCC...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCCGTGCACACTCAGCTTaGCCTGGACGTAGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGRAHSA*PGRSGL
Trigger: AAGCCCGCTACGTCCAGGCCAAGCTGAGTGTGCACG...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCGTGCACACTCAGCTTaGCCTGGACGTAGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAARAHSA*PGRSGL
Trigger: AAGCCCGCTACGTCCAGGCCAAGCTGAGTGTGCACG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTATCAGGGTCTCCAGCGTaGGCCGCACATCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLSGSPA*AAHLPA
Trigger: TGCAGGCAGATGTGCGGCCCACGCTGGAGACCCTGA...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGCCTGGGGTTCTCTGCTaGGCTTACAGTCTGATTGTG +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMPGVLC*AYSLIV
Trigger: CACAATCAGACTGTAAGCCCAGCAGAGAACCCCAGG...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CAA 72 bp GGCAGTGGAACAGATCCCAGATCCCAACGCTGTAGCTaGGGCGTCCTCCCACCAGGGGTTCCTTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GSGTDPRSQRCS*GVLPPGVPCSE
Trigger: TTCAGAACAAGGAACCCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGGATCTGGGATCTGTTCCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTTTGCCCGTGCGCTCCTaGAGCAGGCGCACGATCTGG +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCLPVRS*SRRTIW
Trigger: CCAGATCGTGCGCCTGCTTCAGGAGCGCACGGGCAA...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTCTGGCTGAGGGCGGCTaGCCGCTTGTAGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCLAEGG*PLVAVP
Trigger: CGGAACAGCTACAAGCGGTCAGCCGCCCTCAGCCAG...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAGAATCACGAACTGGCTaGGGGCGGCTGACCGCTTGT +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLESRTG*GRLTAC
Trigger: ACAAGCGGTCAGCCGCCCTCAGCCAGTTCGTGATTC...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCACAACGGCCGTCCCTTaGGAAGATCCTTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAATTAVP*EDPCRA
Trigger: AGCTCTACAAGGATCTTCTCAAGGGACGGCCGTTGT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGCAGCGCCCCGTACATaGTGGTGCTCCCTTGATAGA +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAAAPRT*WCSLDR
Trigger: TCTATCAAGGGAGCACCATCATGTACGGGGCGCTGC...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCTCAGAAACCAGGCTGTaGTGTACATCTCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLSETRL*CTSLKH
Trigger: GTGCTTCAGAGATGTACATCACAGCCTGGTTTCTGA...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCCCTTGTTCTGAAAGCTaGCACCAGTGTTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLPCSES*HQCCSE
Trigger: TTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGATCTTCACCACTGGCTaGCTTTCAGCAAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMIFTTG*LSASSP
Trigger: AGGGGAACTTGCTGAAAGGCAGCCAGTGGTGAAGAT...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCTTCACTGTGCCTCGTaGTGTGAGCCGGCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAALHCAS*CEPAVD
Trigger: GTCTACAGCCGGCTCACAGCACGAGGCACAGTGAAG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCCTGATGCGACCACAGTaGCAGCCCACAGCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGLMRPQ*QPTACS
Trigger: AGAACACGCTGTGGGCTGGCACTGTGGTCGCATCAG...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR CCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGTGAAGTTCAGGATCTaGTCGCCAGGGGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAVKFRI*SPGVLS
Trigger: GCTGAGGACCCCTGGCGACCAGATCCTGAACTTCAC...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGATTCTTCAGCCCCTCCTaGGAGCATTCTCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRFFSPS*EHSPLK
Trigger: CTTCAAGGGAGAATGCTCCCAGGAGGGGCTGAAGAA...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGATGGGCCAACGACGTaGCAGTTTGCACTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAADGPTT*QFALEC
Trigger: ACACTCAAGTGCAAACTGCCACGTCGTTGGCCCATC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTTGCCCACTGATGGGATaGGCCAACGACGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAACPLMG*ANDVAV
Trigger: AACTGCCACGTCGTTGGCCCATCCCATCAGTGGGCA...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGCTTACTTCGGGGATTTaGGGTATTCATGACACTCCG +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMLTSGI*GIHDTP
Trigger: CGGAGTGTCATGAATACCTCAAATCCCCGAAGTAAG...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAAGAGGAGGAAGCGGATaGTCTGCAGGTACCAACGGC +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLRGGSG*SAGTNG
Trigger: GCCGTTGGTACCTGCAGATCATCCGCTTCCTCCTCT...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGAGCGTTGGGCCCTTCTaGGCCGGTGGGTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQSVGPF*AGGSWD
Trigger: ATCCCAGGACCCACCGGCTCAGAAGGGCCCAACGCT...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGCACAATGCCAGCCATaGCCACATCTGCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGAQCQP*PHLLPS
Trigger: TGAAGGGAGCAGATGTGGTCATGGCTGGCATTGTGC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCCCGCAGTCAGATTCCTaGATCATGCTGACGTCATTG +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAPQSDS*IMLTSL
Trigger: CAATGACGTCAGCATGATTCAGGAATCTGACTGCGG...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCAGCCTGCATGGTGCTaGTACAGAGGCTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAQPAWC*YRGSCE
Trigger: TTCACAGGAGCCTCTGTATCAGCACCATGCAGGCTG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAGACCCTCCCTCCCGTTaGTGCAGCGTTAGGACTCCG +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPDPPSR*CSVRTP
Trigger: CGGAGTCCTAACGCTGCATCAACGGGAGGGAGGGTC...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGGGTACTTCTCACCCTTaGCCGCCTCCGCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQGTSHP*PPPPQC
Trigger: GCACTGGGGCGGAGGCGGTCAAGGGTGAGAAGTACC...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATTCAGGGACCGTCCAGTaGATGGCGTCAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNSGTVQ*MASASC
Trigger: GCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGA...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCTGCGTCTCCAGTGTCTaGGAAGCACGGTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGCVSSV*EARCVH
Trigger: ATGCACACACCGTGCTTCTCAGACACTGGAGACGCA...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCAGGAAGCGGATGATCTaGAGGTACCAACGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGRKRMI*RYQRPA
Trigger: TGCAGGCCGTTGGTACCTGCAGATCATCCGCTTCCT...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCTTCTCGGGCCATGTTaGCACACTCTTCCTCCAACC +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAALLGPC*HTLPPT
Trigger: GGTTGGAGGAAGAGTGTGGCAACATGGCCCGAGAAG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTGCCTCCGTCCCCTACTaGACAGGTGAGCTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCASVPY*TGELAR
Trigger: ACGGGCAAGCTCACCTGTGCAGTAGGGGACGGAGGC...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAGAGGAAAAGACAGCCTaGATGGTGCTGATACAGAGG +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLREEKTA*MVLIQR
Trigger: CCTCTGTATCAGCACCATGCAGGCTGTCTTTTCCTC...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGAGGAAAAGACAGCCTaGATGGTGCTGATACAGAGG +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAEEKTA*MVLIQR
Trigger: CCTCTGTATCAGCACCATGCAGGCTGTCTTTTCCTC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTAACCCAAGAATGCCTTaGTCTACCACGTCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAANPRMP*STTSRD
Trigger: GTCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTT...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGCCCCTGGGGTTCTCTaGTGGGCTTACAGTCTGATT +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGAPGVL*WAYSLI
Trigger: AATCAGACTGTAAGCCCAGCAGAGAACCCCAGGGGC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCCTGCGCCTCAAACCATaGTGTGGCGGAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVLRLKP*CGGEDR
Trigger: TCTGTCTTCTCCGCCACAGCATGGTTTGAGGCGCAG...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCGCTACTGTTCCGAGATaGAGCCGTTTGAAAATCATC +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLATVPR*SRLKII
Trigger: GATGATTTTCAAACGGCTCCATCTCGGAACAGTAGC...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGACCAGCCGAAAAACGTaGATGTCTTGGTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMTSRKT*MSWFLV
Trigger: GACCAGAAACCAAGACATCCACGTTTTTCGGCTGGT...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATTCTGGGCCTTCTGGGTaGGGGCACATCGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNSGPSG*GHIGSR
Trigger: TCTGCTGCCGATGTGCCCCCACCCAGAAGGCCCAGA...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGAGCAGGCGCACGATCTaGGCCTTCTGGGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQSRRTI*AFWVGA
Trigger: TGCCCCCACCCAGAAGGCCCAGATCGTGCGCCTGCT...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCGTACCCAGGCGCCCCTaGGGTTCTCTGCTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRVPRRP*GSLLGL
Trigger: TAAGCCCAGCAGAGAACCCCAGGGGCGCCTGGGTAC...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGTACCCAGGCGCCCCTaGGGTTCTCTGCTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNVPRRP*GSLLGL
Trigger: TAAGCCCAGCAGAGAACCCCAGGGGCGCCTGGGTAC...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCCGGGTAATGCCGCTTTaGCCTGAGAAGATGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGRVMPL*PEKMLR
Trigger: CCGAAGCATCTTCTCAGGCCAAAGCGGCATTACCCG...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTCGGCAGGGACCCGCTaGTTCTTTTCAACGATGATA +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAASAGTR*FFSTMI
Trigger: TATCATCGTTGAAAAGAACCAGCGGGTCCCTGCCGA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGATTTGAGGTATTCATaGCACTCCGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAADLRYS*HSGVLC
Trigger: GCAGAGAACTCCGGAGTGTCATGAATACCTCAAATC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTGCTGAAGGGCAACCATaGCCAGCGAGACCACCACCA +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCAEGQP*PARPPP
Trigger: TGGTGGTGGTCTCGCTGGTCATGGTTGCCCTTCAGC...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGATGCCTGTCTTGTCTGTaGGTAAGTACGAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRCLSCL*VSTKSC
Trigger: GCAGGATTTCGTACTTACTCACAGACAAGACAGGCA...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCGGGCTTCAAAGTCCTaGTACTGCTCCTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAARASKS*YCSSAR
Trigger: TCTTGCAGAGGAGCAGTATCAGGACTTTGAAGCCCG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCTCAGCATCCAAACCTTaGTGCCAGCATTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVSASKP*CQHSSG
Trigger: CCCTGAGGAATGCTGGCATCAAGGTTTGGATGCTGA...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACATTGCCCGTGCGCTCCTaGAGCAGGCGCACGATCTGG +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTLPVRS*SRRTIW
Trigger: CCAGATCGTGCGCCTGCTTCAGGAGCGCACGGGCAA...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTATTCCTGAATCATGCTaGCGTCATTGCCTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAIPESC*RHCLRP
Trigger: GGGACGGAGGCAATGACGTCAGCATGATTCAGGAAT...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTGTAGCAGGCCAGGCTaGGCAGCTCCGCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGCSRPG*AAPPLS
Trigger: TGACAGTGGCGGAGCTGCTCAGCCTGGCCTGCTACA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCGTGGCAGTTTGCACTTaGGTGTCGGTACTTCTCACC +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVVAVCT*VSVLLT
Trigger: GGTGAGAAGTACCGACACTCAAGTGCAAACTGCCAC...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACACTGTGCCTCGTGCTGTaGGCCGGCTGTAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTLCLVL*AGCRPG
Trigger: CCCAGGTCTACAGCCGGCTCACAGCACGAGGCACAG...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR GCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCCACTCCGGAGTTCTCTaGCAGTGTAAAGAACAACAC +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAHSGVL*QCKEQH
Trigger: GTGTTGTTCTTTACACTGGCAGAGAACTCCGGAGTG...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACACTTCGTGCACGCGGCTaGTCATGGTCCGCCGGACCT +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTLRARG*SWSAGP
Trigger: AGGTCCGGCGGACCATGAGCAGCCGCGTGCACGAAG...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATCTCATCGGGGCTGGATaGCTGGTATACGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNLIGAG*LVYAAG
Trigger: TCCTGCCGCGTATACCAGGCATCCAGCCCCGATGAG...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGGCCTCCGTCCCCTACTaGACAGGTGAGCTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQASVPY*TGELAR
Trigger: ACGGGCAAGCTCACCTGTGCAGTAGGGGACGGAGGC...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAAAAGGCACGCACGCATaGCCAGCCTACCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLKGTHA*PAYPSK
Trigger: TTTACTGGGGTAGGCTGGGCATGCGTGCGTGCCTTT...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAGGCAAAGGTTTAAAATaGTGCCCTAAAGGCACGCAC +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRGKGLK*CPKGTH
Trigger: GTGCGTGCCTTTAGGGCAGCATTTTAAACCTTTGCC...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGCGCTGCAGGATGCTTTaGAGGTTCATTCAAAACCAA +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMRCRML*RFIQNQ
Trigger: TTGGTTTTGAATGAACCTGCAAAGCATCCTGCAGCG...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCCTTAGTGGTGAGCGTTaGGCCCTTCTGAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRLSGER*ALLSRW
Trigger: CCACCGGCTCAGAAGGGCCCAACGCTCACCACTAAG...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATTCGGGGCTGGATGCCTaGTATACGCGGCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNSGLDA*YTRQES
Trigger: AGACTCCTGCCGCGTATACCAGGCATCCAGCCCCGA...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGCCACCTCATCGGGGCTaGATGCCTGGTATACGCGGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQPPHRG*MPGIRG
Trigger: GCCGCGTATACCAGGCATCCAGCCCCGATGAGGTGG...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGTCAGGGTCTCCAGCGTaGGCCGCACATCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQSGSPA*AAHLPA
Trigger: TGCAGGCAGATGTGCGGCCCACGCTGGAGACCCTGA...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTGAGCCTCCCCGCGGTTaGTCACCAGCCGAAAAACGT +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCEPPRG*SPAEKR
Trigger: ACGTTTTTCGGCTGGTGACCAACCGCGGGGAGGCTC...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAGAGCCTCCCCGCGGTTaGTCACCAGCCGAAAAACGT +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPEPPRG*SPAEKR
Trigger: ACGTTTTTCGGCTGGTGACCAACCGCGGGGAGGCTC...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTCTGGGCCTTCTGGGTaGGGGCACATCGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGSGPSG*GHIGSR
Trigger: TCTGCTGCCGATGTGCCCCCACCCAGAAGGCCCAGA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAATGCCTCTGCCTTTGTaGGGTCATCTTCCATTATGC +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRMPLPL*GHLPLC
Trigger: GCATAATGGAAGATGACCCCACAAAGGCAGAGGCAT...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCGGACCGTCCAGTGAATaGCGTCAGCCAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGGPSSE*RQPAAH
Trigger: GTGGGCAGCTGGCTGACGCCATTCACTGGACGGTCC...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAAAGACTTACGGCCCATaGAGCTCCCAGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLKTYGP*SSQVTV
Trigger: CACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTT...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCAGCAACGAGCCACGCTaGCAAACAATGAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAASNEPR*QTMKVE
Trigger: CTCTACTTTCATTGTTTGCCAGCGTGGCTCGTTGCT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAGTACACAAGCTTTATTaGGCAACAGCAACGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRVHKLY*ATATSH
Trigger: GTGGCTCGTTGCTGTTGCCCAATAAAGCTTGTGTAC...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CAA 72 bp GGAAGAGAAGAGTCCCAGCCCCCTGACCTTTCCGCTTaGGTCTTGGAGGATCTGAGTCACATCTGCCATGTT +
Preference number: 4 (lower is better)
Translates to: GREESQPPDLSA*VLEDLSHICHV
Trigger: AACATGGCAGATGTGACTCAGATCCTCCAAGACCAAAGCGGAAAGGTCAGGGGGCTGGGACTCTTCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCAGAGGAGGAAGCGGATaGTCTGCAGGTACCAACGGC +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRRGGSG*SAGTNG
Trigger: GCCGTTGGTACCTGCAGATCATCCGCTTCCTCCTCT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTATTGTACTTCGTCCATTaGGTCGAGGCCGTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLLYFVH*VEAVGY
Trigger: GTAGCCTACGGCCTCGACTCAATGGACGAAGTACAA...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTTTCTCGGCCTCAGCCTaGTCAGTCACACCGTTGGAC +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCFSASA*SVTPLD
Trigger: GTCCAACGGTGTGACTGATCAGGCTGAGGCCGAGAA...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGGTTTGCTTTCATAGGTaGAAGGGAAGATCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMVCFHR*KGRSVG
Trigger: TCCTACAGATCTTCCCTTTCACCTATGAAAGCAAAC...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACATCACCGTGGCCACTTTaGGGGAGCGGTCGTGCACAC +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTSPWPL*GSGRAH
Trigger: GTGTGCACGACCGCTCCCTCAAAGTGGCCACGGTGA...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGGCTGGAGACGATACTaGGCATTTCCGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGGWRRY*AFPNGD
Trigger: ATCTCCATTCGGAAATGCTCAGTATCGTCTCCAGCC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATAGAGTCCCAGCCCCCTaGCCTTTCCGCTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNRVPAP*PFRFGL
Trigger: AAGACCAAAGCGGAAAGGTCAGGGGGCTGGGACTCT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAAGGGGTTCCTTGTTCTaGAAGCTGCCACCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLRGSLF*KLPPVL
Trigger: CAACACTGGTGGCAGCTTTCAGAACAAGGAACCCCT...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTATCAGCAAGTTCCCCTTaGAATCTGCCGGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLSASSP*NLPAVE
Trigger: TTCCACTGCCGGCAGATTTCAAGGGGAACTTGCTGA...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGTTTGTGGAGAACACTaGCGAGTACCTTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGVCGEH*RVPSTS
Trigger: GGAAGTGGAAGGTACTCGTCAGTGTTCTCCACAAAC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTACCACCACAACTAAGATaGCCTCCGAGAAGTACCCAG +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLPPQLR*PPRSTQ
Trigger: CTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGG...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCGTCTCCCCATCCAGCTaGTCCGTCCGCAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRVSPSS*SVRKKH
Trigger: ATGCTTCTTGCGGACGGATCAGCTGGATGGGGAGAC...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR TCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCACCCACAACAGTACCTaGTGCGACCACAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRTHNST*CDHSAS
Trigger: GCTGGCACTGTGGTCGCATCAGGTACTGTTGTGGGT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR GCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGGCTGCTCAGGAATCGTaGTGGAGCGAACCACGGTCC +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMAAQES*WSEPRS
Trigger: GGACCGTGGTTCGCTCCAGCACGATTCCTGAGCAGC...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCCTCATCGGGGCTGGATaGCTGGTATACGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGLIGAG*LVYAAG
Trigger: TCCTGCCGCGTATACCAGGCATCCAGCCCCGATGAG...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTTGAGGGAGCGGTCGTaGACACTCAGCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGLRERS*TLSLAW
Trigger: CCAGGCCAAGCTGAGTGTGCACGACCGCTCCCTCAA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCTGTTGTTCCGAAAGATaGCTCTGCCTTTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVCCSER*LCLCGV
Trigger: GACCCCACAAAGGCAGAGGCATCTTTCGGAACAACA...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTATCTTCACCACTGGCTaGCTTTCAGCAAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAIFTTG*LSASSP
Trigger: AGGGGAACTTGCTGAAAGGCAGCCAGTGGTGAAGAT...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGGCTCCCACACGCCCTaGCTGCAGGAGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFGSHTP*LQEPAS
Trigger: GGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAGCTCCAACTTTAAGATaGGCCCTTGGGATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLAPTLR*ALGMPS
Trigger: GGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGC...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAGCTATATTAACAGACTaGGCCTCAAACCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRAILTD*ASNHAV
Trigger: CACAGCATGGTTTGAGGCGCAGTCTGTTAATATAGC...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCAAAAAGTATTTGAACTaGTTGAACAGCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLKKYLN*LNSTPG
Trigger: TCCTGGGGTGCTGTTCAACCAGTTCAAATACTTTTT...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCACGGGAGTCACGTTGTaGCAGAGCGCGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGTGVTL*QSAMAF
Trigger: GAAGGCCATCGCGCTCTGCCACAACGTGACTCCCGT...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCGATCAGTCACACCGTTaGACTCATACACGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVDQSHR*THTRES
Trigger: TGACTCCCGTGTATGAGTCCAACGGTGTGACTGATC...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTCTCCTCTCATTTACTaGTTACGATCCCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAASPLIY*LRSQES
Trigger: GGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACCCAACGCTGTAGCTTaGGCGTCCTCCCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPPNAVA*ASSHQG
Trigger: CCCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGG...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGCATGTAGTCCATCCTaGGAGGGGAGAAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGACSPS*EGRNLH
Trigger: GTGAAGATTTCTCCCCTCCCAGGATGGACTACATGC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCGCATGTAGTCCATCCTaGGAGGGGAGAAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVACSPS*EGRNLH
Trigger: GTGAAGATTTCTCCCCTCCCAGGATGGACTACATGC...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCGACCTCAAATTAAATTaGCTGTCAAAGACTTACGGC +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLDLKLN*LSKTYG
Trigger: GCCGTAAGTCTTTGACAGCCAATTTAATTTGAGGTC...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCCCTCAAACCATGCTGTaGCGGAGAAGACAGATTCAC +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVPQTML*RRRQIH
Trigger: GTGAATCTGTCTTCTCCGCCACAGCATGGTTTGAGG...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCATGTAGACCTGGGAGTTaGCTTCCTTGTCCCGCACGT +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPCRPGS*LPCPAR
Trigger: ACGTGCGGGACAAGGAAGTCAACTCCCAGGTCTACA...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCAAAGAGGATCTTGGTaGGGCAGTTCACTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAQRGSW*GSSLPS
Trigger: ACTTGGAAGTGAACTGCCTCACCAAGATCCTCTTTG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCGGGAGTCTCCCGAGATaGCCAGGGCACAATCATGCT +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGGSLPR*PGHNHA
Trigger: AGCATGATTGTGCCCTGGTCATCTCGGGAGACTCCC...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGGCACGGCCTATGATGTaGGCTTTGAGTAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQARPMM*ALSSWG
Trigger: CCCCCAGCTACTCAAAGCTCACATCATAGGCCGTGC...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCAGGCAAGGGACTATCTaGTCCTCGTGTCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRRQGTI*SSCLQL
Trigger: GAGCTGGAGACACGAGGATCAGATAGTCCCTTGCCT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTACCTCTAAAACTTTCTaGCGAGGCTCCCACACGCCC +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCTSKTF*RGSHTP
Trigger: GGGCGTGTGGGAGCCTCGTCAGAAAGTTTTAGAGGT...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCCACCTCAATCAAAATTaGGAATTAAGGAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLHLNQN*ELRKRP
Trigger: TGGCCTTTTCCTTAATTCTCAATTTTGATTGAGGTG...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCCCGCCCCAGTGCGGCTaGGACAACAGAGTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGPPQCG*DNRVKR
Trigger: CCTTTTTACTCTGTTGTCTCAGCCGCACTGGGGCGG...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGCCGCCCCAGTGCGGCTaGGACAACAGAGTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQPPQCG*DNRVKR
Trigger: CCTTTTTACTCTGTTGTCTCAGCCGCACTGGGGCGG...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGATATCTATCACCTTTTaGAATTCTGACACGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMISITF*NSDTSG
Trigger: CCCAGACGTGTCAGAATTTCAAAAGGTGATAGATAT...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAACATACGATCGAATCTaGAGAAGGTCGGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPTYDRI*RRSAAV
Trigger: CACGGCCGCCGACCTTCTTCAGATTCGATCGTATGT...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR GCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTCACAACAGTACCTCGTaGTGTGAGCCGGCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCHNSTS*CEPAVD
Trigger: GTCTACAGCCGGCTCACAGCACGAGGTACTGTTGTG...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311637.9
CDS-3UTR GCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCCAGGTACCAACGGCCTaGAAAGTGCTGAAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRQVPTA*KVLKGN
Trigger: GTTGCCCTTCAGCACTTTGCAGGCCGTTGGTACCTG...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAGCTGCTCAGGAATCGTaGTGGAGCGAACCACGGTCC +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTAAQES*WSEPRS
Trigger: GGACCGTGGTTCGCTCCAGCACGATTCCTGAGCAGC...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGAAATCCTGCCCAGCTaGTCAGGAATCGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNEILPS*SGIVLE
Trigger: CTCCAGCACGATTCCTGAGCAGCTGGGCAGGATTTC...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAGCCTTCACGGCTTCGTaGACGCGGCTGCTCATGGTC +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPAFTAS*TRLLMV
Trigger: GACCATGAGCAGCCGCGTGCACGAAGCCGTGAAGGC...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAACCAGGGCACAATCATaGTTCCTGCGGAAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPTRAQS*FLRKAF
Trigger: GAACGCCTTCCGCAGGAAGCATGATTGTGCCCTGGT...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTATGTTGTTCCGAAAGATaGCTCTGCCTTTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLCCSER*LCLCGV
Trigger: GACCCCACAAAGGCAGAGGCATCTTTCGGAACAACA...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCACCACGTCCCGCGACTaGAAACTCCCTTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRTTSRD*KLPSSE
Trigger: TTCAGAGGAAGGGAGTTTGCAGTCGCGGGACGTGGT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCAGACCATCTTCATTCTaGTTCTGCTGGAAACCTCTA +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAARPSSF*FCWKPL
Trigger: TAGAGGTTTCCAGCAGAAGCAGAATGAAGATGGTCT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCTGGAAAAGGGAGGTCTaGTCCAACTTTAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVWKREV*SNFKMR
Trigger: GCGCATCTTAAAGTTGGAGCAGACCTCCCTTTTCCA...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCGCTCACGCTGCAGGATaGTTTGCAGGTTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGAHAAG*FAGSFK
Trigger: TTTGAATGAACCTGCAAAGCATCCTGCAGCGTGAGC...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGTCCAGGTGGAGGAGCTaGTCACGCTGCAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQSRWRS*SRCRML
Trigger: AAGCATCCTGCAGCGTGAGCAGCTCCTCCACCTGGA...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCAGCTGCATGGAAGACTaGTCTCGGCCCACCAGGGTT +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGSCMED*SRPTRV
Trigger: AACCCTGGTGGGCCGAGACCAGTCTTCCATGCAGCT...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCGTGAAGTTCAGGATCTaGTCGCCAGGGGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGVKFRI*SPGVLS
Trigger: GCTGAGGACCCCTGGCGACCAGATCCTGAACTTCAC...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATCTGGATAAGCAGGGCTaGCTGGAGACGATACTGAGC +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNLDKQG*LETILS
Trigger: GCTCAGTATCGTCTCCAGCCAGCCCTGCTTATCCAG...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCTTAACTCACACACTATaGATGCTGAATCAGATCAAG +
Preference number: 4 (lower is better)
Translates to: FLTRLPHALPAGASIPNLLTHTL*MLNQIK
Trigger: CTTGATCTGATTCAGCATCCATAGTGTGTGAGTTAA...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCTATGGCATGCATATGTaGCTTCTGCAAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAYGMHM*LLQEAT
Trigger: AGTTGCTTCTTGCAGAAGCCACATATGCATGCCATA...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATGAAGGTCGGCGGCCGTaGGGAGCCTCTGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDEGRRP*GASACR
Trigger: CCTGCACGCAGAGGCTCCCCACGGCCGCCGACCTTC...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR TCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGTGTAGACCTGGGAGTTaGCTTCCTTGTCCCGCACGT +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMCRPGS*LPCPAR
Trigger: ACGTGCGGGACAAGGAAGTCAACTCCCAGGTCTACA...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCATCAGCATCCAAACCTTaGTGCCAGCATTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPSASKP*CQHSSG
Trigger: CCCTGAGGAATGCTGGCATCAAGGTTTGGATGCTGA...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAGCAGCGCCCCGTACATaGTGGTGCTCCCTTGATAGA +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTAAPRT*WCSLDR
Trigger: TCTATCAAGGGAGCACCATCATGTACGGGGCGCTGC...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAGCACGGCCTATGATGTaGGCTTTGAGTAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTARPMM*ALSSWG
Trigger: CCCCCAGCTACTCAAAGCTCACATCATAGGCCGTGC...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATAGGGGTTCCTTGTTCTaGAAGCTGCCACCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNRGSLF*KLPPVL
Trigger: CAACACTGGTGGCAGCTTTCAGAACAAGGAACCCCT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATTCAGCAAGTTCCCCTTaGAATCTGCCGGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNSASSP*NLPAVE
Trigger: TTCCACTGCCGGCAGATTTCAAGGGGAACTTGCTGA...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCAGGCAAGGGACTATCTaGTCCTCGTGTCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGRQGTI*SSCLQL
Trigger: GAGCTGGAGACACGAGGATCAGATAGTCCCTTGCCT...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGTGGCAGTTTGCACTTaGGTGTCGGTACTTCTCACC +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNVAVCT*VSVLLT
Trigger: GGTGAGAAGTACCGACACTCAAGTGCAAACTGCCAC...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTGTGTTCAAACAGTGCTaGCTGTGTACCTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCVFKQC*LCTSRP
Trigger: GGGCCTTGAGGTACACAGTCAGCACTGTTTGAACAC...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCATATCTATCACCTTTTaGAATTCTGACACGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAISITF*NSDTSG
Trigger: CCCAGACGTGTCAGAATTTCAAAAGGTGATAGATAT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTACACTCCGGAGTTCTCTaGCAGTGTAAAGAACAACAC +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLHSGVL*QCKEQH
Trigger: GTGTTGTTCTTTACACTGGCAGAGAACTCCGGAGTG...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGACCACGTCCCGCGACTaGAAACTCCCTTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMTTSRD*KLPSSE
Trigger: TTCAGAGGAAGGGAGTTTGCAGTCGCGGGACGTGGT...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCTCAATACATCTTTTCTaGCGACCTTTTCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGSIHLF*RPFPSG
Trigger: GCCAGAGGGAAAAGGTCGGCAGAAAAGATGTATTGA...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAACATGTGCACACGCATaGTTTCAAAATGAGGATCAA +
Preference number: 4 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRTCAHA*FQNEDQ
Trigger: TTGATCCTCATTTTGAAAGCATGCGTGTGCACATGT...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTATGGAAAAGGGAGGTCTaGTCCAACTTTAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLWKREV*SNFKMR
Trigger: GCGCATCTTAAAGTTGGAGCAGACCTCCCTTTTCCA...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATTGGGGAGCCTCTGCGTaGAGGCCACGGGAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDWGASA*RPREAA
Trigger: TGCGGCTTCCCGTGGCCTGCACGCAGAGGCTCCCCA...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR CCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCCCACCTCATCGGGGCTaGATGCCTGGTATACGCGGC +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFPPHRG*MPGIRG
Trigger: GCCGCGTATACCAGGCATCCAGCCCCGATGAGGTGG...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGTCAGACAGGCCCAGATaGGTCTCTTTCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMSDRPR*VSFRTL
Trigger: GAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGA...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCGAATCCAGTGTAACCTaGATAAGCAGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRESSVT*ISRAGW
Trigger: CCAGCCAGCCCTGCTTATCCAGGTTACACTGGATTC...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTGAAATCTGCCGGCAGTaGAACAGATCCCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCEICRQ*NRSQIP
Trigger: TGGGATCTGGGATCTGTTCCACTGCCGGCAGATTTC...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCTTCACTTCAGGGGAGTaGAACTGGGATGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: LRCALGMPSKQLELVPPVFTSGE*NWDGNF
Trigger: AAAATTCCCATCCCAGTTCCACTCCCCTGAAGTGAA...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCTTCACTTCAGGGGAGTaGAACTGGGATGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGFTSGE*NWDGNF
Trigger: AAAATTCCCATCCCAGTTCCACTCCCCTGAAGTGAA...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
3UTR CAA 72 bp CTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTaGTGGGGTCATCTTCCATTATGCCTCCTAACAGGA +
Preference number: 4 (lower is better)
Translates to: LPPVLFRKMPLP*WGHLPLCLLTG
Trigger: TCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGCTGAAGGGCAACCATaGCCAGCGAGACCACCACCA +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFAEGQP*PARPPP
Trigger: TGGTGGTGGTCTCGCTGGTCATGGTTGCCCTTCAGC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTTGTACTTCGTCCATTaGGTCGAGGCCGTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGLYFVH*VEAVGY
Trigger: GTAGCCTACGGCCTCGACTCAATGGACGAAGTACAA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGCTGGGTGTAAATGCTaGAAATGTGGCTTTGTACTT +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAAGCKC*KCGFVL
Trigger: AAGTACAAAGCCACATTTTCAGCATTTACACCCAGC...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATAGATCTGTAGGATGGTaGAGTTCAGGATCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNRSVGW*SSGSGR
Trigger: GCGACCAGATCCTGAACTTCACCATCCTACAGATCT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCCGTACTCATAGTACTTaGGGCAAACCTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRRTHST*GKPPGS
Trigger: ACTCCCTGGAGGTTTGCCTCAAGTACTATGAGTACG...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATCCCCTACTGCACAGGTaGGCTTGCCCGTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDPLLHR*ACPCAP
Trigger: AGGAGCGCACGGGCAAGCTCACCTGTGCAGTAGGGG...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGATTCCTGAATCATGCTaGCGTCATTGCCTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQIPESC*RHCLRP
Trigger: GGGACGGAGGCAATGACGTCAGCATGATTCAGGAAT...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATCCGCAGTCAGATTCCTaGATCATGCTGACGTCATTG +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNPQSDS*IMLTSL
Trigger: CAATGACGTCAGCATGATTCAGGAATCTGACTGCGG...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGCGGGATCACACCTCTaGAATTCTTTTACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNAGSHL*NSFTRW
Trigger: CCACCTCGTAAAAGAATTTCAGAGGTGTGATCCCGC...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTGCGGGATCACACCTCTaGAATTCTTTTACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCAGSHL*NSFTRW
Trigger: CCACCTCGTAAAAGAATTTCAGAGGTGTGATCCCGC...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCTAAAACAACTCTGCTaGAAATGTCTGAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAALKQLC*KCLRSF
Trigger: GAAGGACCTCAGACATTTTCAGCAGAGTTGTTTTAG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAACCTCTAAAACTTTCTaGCGAGGCTCCCACACGCCC +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTTSKTF*RGSHTP
Trigger: GGGCGTGTGGGAGCCTCGTCAGAAAGTTTTAGAGGT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTGTTTGTGGAGAACACTaGCGAGTACCTTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCVCGEH*RVPSTS
Trigger: GGAAGTGGAAGGTACTCGTCAGTGTTCTCCACAAAC...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTCAGCCAGCTGCCCACTaGTGGGATGGGCCAACGACG +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSQPAAH*WDGPTT
Trigger: CGTCGTTGGCCCATCCCATCAGTGGGCAGCTGGCTG...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGCCACCACAACTAAGATaGCCTCCGAGAAGTACCCAG +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMPPQLR*PPRSTQ
Trigger: CTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGG...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGGTGTTCAAACAGTGCTaGCTGTGTACCTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMVFKQC*LCTSRP
Trigger: GGGCCTTGAGGTACACAGTCAGCACTGTTTGAACAC...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTACACCTTTTGAAATTCTaGCACGTCTGGGATGGACAA +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLHLLKF*HVWDGQ
Trigger: TTGTCCATCCCAGACGTGTCAGAATTTCAAAAGGTG...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCAGACCATCTTCATTCTaGTTCTGCTGGAAACCTCTA +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGRPSSF*FCWKPL
Trigger: TAGAGGTTTCCAGCAGAAGCAGAATGAAGATGGTCT...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGGAGAAGCACGGTGTGTaGATTCCTAGGTGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQEKHGV*IPRCSG
Trigger: CCCTGAACACCTAGGAATGCACACACCGTGCTTCTC...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAAAACCAAATAGATCCTaGTTCCCCCTGTCACACAAC +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLKPNRS*FPLSHN
Trigger: GTTGTGTGACAGGGGGAAGCAGGATCTATTTGGTTT...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCAATATTTGGCTCTTCTaGGTACACATACGATCGAAT +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAANIWLF*VHIRSN
Trigger: ATTCGATCGTATGTGTACGCAGAAGAGCCAAATATT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR CCA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCAAAATCATCTCGTTCTaGGTAAGAGTGCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGKIISF*VRVPVL
Trigger: CAAGACAGGCACTCTTACCCAGAACGAGATGATTTT...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCGGAAACAGGCTTCTATaGAAGAGAAGAGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRGNRLL*KRRVPA
Trigger: GGCTGGGACTCTTCTCTTCCATAGAAGCCTGTTTCC...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGGAAATCTGCCGGCAGTaGAACAGATCCCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMEICRQ*NRSQIP
Trigger: TGGGATCTGGGATCTGTTCCACTGCCGGCAGATTTC...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCCCGACCTTTTCCCTCTaGCAGAAATGGCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRPTFSL*QKWLNQ
Trigger: CTGATTCAGCCATTTCTGCCAGAGGGAAAAGGTCGG...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATTTCCACTTCCAACTATaGCTTCTTCAGCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNFHFQL*LLQPLL
Trigger: CAGGAGGGGCTGAAGAAGCCATAGTTGGAAGTGGAA...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGGATGGGCCAACGACGTaGCAGTTTGCACTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMDGPTT*QFALEC
Trigger: ACACTCAAGTGCAAACTGCCACGTCGTTGGCCCATC...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCCCTGGGGTTCTCTGCTaGGCTTACAGTCTGATTGTG +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGPGVLC*AYSLIV
Trigger: CACAATCAGACTGTAAGCCCAGCAGAGAACCCCAGG...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAAAGACTTACGGCCCATaGAGCTCCCAGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTKTYGP*SSQVTV
Trigger: CACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAGCCACCTGTCTCACCTaGCACCACAGGCAACACACA +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPATCLT*HHRQHT
Trigger: TGTGTGTTGCCTGTGGTGCCAGGTGAGACAGGTGGC...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTATCAGGGGAGTGGAACTaGGATGGGAATTTTACAATG +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLSGEWN*DGNFTM
Trigger: CATTGTAAAATTCCCATCCCAGTTCCACTCCCCTGA...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACACGGGTAATGCCGCTTTaGCCTGAGAAGATGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTRVMPL*PEKMLR
Trigger: CCGAAGCATCTTCTCAGGCCAAAGCGGCATTACCCG...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGTGAATGTCAATATTTaGCTCTTCTGCGTACACATA +
Preference number: 4 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAVNVNI*LFCVHI
Trigger: TATGTGTACGCAGAAGAGCCAAATATTGACATTCAC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR TCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCGATTTGAGGTATTCATaGCACTCCGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRDLRYS*HSGVLC
Trigger: GCAGAGAACTCCGGAGTGTCATGAATACCTCAAATC...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATATTCATCCCGCACGATaGTGCCCATACGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNIHPAR*CPYVCF
Trigger: AAAGCAAACGTATGGGCATCATCGTGCGGGATGAAT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATTGGCAACTTCCGATTTaGCATCTTTGTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNWQLPI*HLCPGP
Trigger: TGGTCCTGGACAAAGATGTCAAATCGGAAGTTGCCA...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTTGTAGCAGGCCAGGCTaGGCAGCTCCGCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSCSRPG*AAPPLS
Trigger: TGACAGTGGCGGAGCTGCTCAGCCTGGCCTGCTACA...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTAATATAAATGGAACTTaGGCTCTGTCCATCAGGGAA +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAANINGT*ALSIRE
Trigger: TTCCCTGATGGACAGAGCTCAAGTTCCATTTATATT...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGGGCTGGAGACGATACTaGGCATTTCCGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQGWRRY*AFPNGD
Trigger: ATCTCCATTCGGAAATGCTCAGTATCGTCTCCAGCC...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATTCAGGGACCGTCCAGTaGATGGCGTCAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDSGTVQ*MASASC
Trigger: GCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGA...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAGGGCGCAGGGAGCTGTaGGTTTTGCTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTGRREL*VLLSGK
Trigger: TTTTCCTGAAAGCAAAACTCACAGCTCCCTGCGCCC...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGAGCTGTACACGATCTTaGCCATGTCCAGGTTCACAC +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMSCTRS*PCPGSH
Trigger: GTGTGAACCTGGACATGGGCAAGATCGTGTACAGCT...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCGTAAGTACGAAATCCTaGCCAGCTGCTCAGGAATCG +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGVSTKS*PAAQES
Trigger: CGATTCCTGAGCAGCTGGGCAGGATTTCGTACTTAC...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAAACCAGTCATTGTACTaGACAATGCCAGCCATGACC +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPNQSLY*TMPAMT
Trigger: GGTCATGGCTGGCATTGTGCAGTACAATGACTGGTT...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGTCTGGTCACCAGATGTaGATTCTTCGCTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQSGHQM*ILRCAR
Trigger: ACGTGCACAGCGAAGAATGCACATCTGGTGACCAGA...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTTGCATATGTGGCTTCTaGAAGAAGCAACTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAACICGF*KKQLEN
Trigger: GTTTTCAAGTTGCTTCTTGCAGAAGCCACATATGCA...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTATGGCGTCAGCCAGCTaGCCACTGATGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSMASAS*PLMGWA
Trigger: GGCCCATCCCATCAGTGGGCAGCTGGCTGACGCCAT...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAGAGAAGCACGGTGTGTaGATTCCTAGGTGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTEKHGV*IPRCSG
Trigger: CCCTGAACACCTAGGAATGCACACACCGTGCTTCTC...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAGGCAAAGGTTTAAAATaGTGCCCTAAAGGCACGCAC +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPGKGLK*CPKGTH
Trigger: GTGCGTGCCTTTAGGGCAGCATTTTAAACCTTTGCC...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACATTTGGCCTGAGAAGATaGTTCGGAGCTCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTFGLRR*FGAPGG
Trigger: TCCACCTGGAGCTCCGAAGCATCTTCTCAGGCCAAA...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACTGCGCCTCAAACCATaGTGTGGCGGAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPLRLKP*CGGEDR
Trigger: TCTGTCTTCTCCGCCACAGCATGGTTTGAGGCGCAG...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAAAAACGTGGATGTCTTaGTTTCTGGTCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLKTWMS*FLVTRC
Trigger: ACATCTGGTGACCAGAAACCAAGACATCCACGTTTT...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTACGATCTGGGCCTTCTaGGTGGGGGCACATCGGCAG +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSTIWAF*VGAHRQ
Trigger: CTGCCGATGTGCCCCCACCCAGAAGGCCCAGATCGT...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGCCACCTGTCTCACCTaGCACCACAGGCAACACACA +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFATCLT*HHRQHT
Trigger: TGTGTGTTGCCTGTGGTGCCAGGTGAGACAGGTGGC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCATTTCGGGAACAAACTaGGAGCAGGCAAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRISGTN*EQARSK
Trigger: CTTACTTCTTGCCTGCTCTCAGTTTGTTCCCGAAAT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCCAAAGAGGATCTTGGTaGGGCAGTTCACTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGQRGSW*GSSLPS
Trigger: ACTTGGAAGTGAACTGCCTCACCAAGATCCTCTTTG...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTCGGCCTGCAAAGTGCTaGAGGGCAACCATGACCAGC +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSRPAKC*RATMTS
Trigger: GCTGGTCATGGTTGCCCTTCAGCACTTTGCAGGCCG...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGTGGCAACTTCCGATTTaGCATCTTTGTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMWQLPI*HLCPGP
Trigger: TGGTCCTGGACAAAGATGTCAAATCGGAAGTTGCCA...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGTCAGAAACCAGGCTGTaGTGTACATCTCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMSETRL*CTSLKH
Trigger: GTGCTTCAGAGATGTACATCACAGCCTGGTTTCTGA...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTTACCTCAAGGCCCTCTaGCCTCAAATTAAATTGGCT +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCYLKAL*PQIKLA
Trigger: AGCCAATTTAATTTGAGGTCAGAGGGCCTTGAGGTA...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCAATGCCGCTTTGGCCTaGGAAGATGCTTCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFNAALA*EDASEL
Trigger: GAGCTCCGAAGCATCTTCTCAGGCCAAAGCGGCATT...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCTGCAAGAGACTTCTTTaGCACCACGAGCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFCKRLL*HHEHPQ
Trigger: CTGCGGGTGCTCGTGGTGGCAAAGAAGTCTCTTGCA...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGCTGATACTGCTCCTCTaGAAGAGACTTCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQLILLL*KRLLCH
Trigger: GTGGCAAAGAAGTCTCTTGCAGAGGAGCAGTATCAG...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACATCTGGTCACCAGATGTaGATTCTTCGCTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTSGHQM*ILRCAR
Trigger: ACGTGCACAGCGAAGAATGCACATCTGGTGACCAGA...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGCCTTGTTCTGAAAGCTaGCACCAGTGTTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMPCSES*HQCCSE
Trigger: TTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAGTTCCCCTTGAAATCTaGCGGCAGTGGAACAGATCC +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPVPLEI*RQWNRS
Trigger: GGATCTGTTCCACTGCCGGCAGATTTCAAGGGGAAC...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCAAACCAAATAGATCCTaGTTCCCCCTGTCACACAAC +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRKPNRS*FPLSHN
Trigger: GTTGTGTGACAGGGGGAAGCAGGATCTATTTGGTTT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGGCTCACGCTGCAGGATaGTTTGCAGGTTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMAHAAG*FAGSFK
Trigger: TTTGAATGAACCTGCAAAGCATCCTGCAGCGTGAGC...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGCTACTGTTCCGAGATaGAGCCGTTTGAAAATCATC +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNATVPR*SRLKII
Trigger: GATGATTTTCAAACGGCTCCATCTCGGAACAGTAGC...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAGATCAGTCACACCGTTaGACTCATACACGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTDQSHR*THTRES
Trigger: TGACTCCCGTGTATGAGTCCAACGGTGTGACTGATC...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATGGGTCCTCAGCTGCATaGAAGACTGGTCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDGSSAA*KTGLGP
Trigger: TGGGCCGAGACCAGTCTTCCATGCAGCTGAGGACCC...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTAAAACACAGGAAACATaGTGTAAATTGTGGAGTACC +
Preference number: 4 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAKTQET*CKLWST
Trigger: GGTACTCCACAATTTACACCATGTTTCCTGTGTTTT...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCATGCCTCTGCCTTTGTaGGGTCATCTTCCATTATGC +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGMPLPL*GHLPLC
Trigger: GCATAATGGAAGATGACCCCACAAAGGCAGAGGCAT...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCATTCTTCAGCCCCTCCTaGGAGCATTCTCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPFFSPS*EHSPLK
Trigger: CTTCAAGGGAGAATGCTCCCAGGAGGGGCTGAAGAA...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCTCAGGGGAGTGGAACTaGGATGGGAATTTTACAATG +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRSGEWN*DGNFTM
Trigger: CATTGTAAAATTCCCATCCCAGTTCCACTCCCCTGA...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGAGCAACGAGCCACGCTaGCAAACAATGAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQSNEPR*QTMKVE
Trigger: CTCTACTTTCATTGTTTGCCAGCGTGGCTCGTTGCT...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTGCTGGGTGTAAATGCTaGAAATGTGGCTTTGTACTT +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCAGCKC*KCGFVL
Trigger: AAGTACAAAGCCACATTTTCAGCATTTACACCCAGC...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGCGTAATTTCTCCAGTTaGTTCATCCCGCACGATGAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQRNFSS*FIPHDD
Trigger: ATCATCGTGCGGGATGAATCAACTGGAGAAATTACG...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATGGGAGTCTCCCGAGATaGCCAGGGCACAATCATGCT +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDGSLPR*PGHNHA
Trigger: AGCATGATTGTGCCCTGGTCATCTCGGGAGACTCCC...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCGACTTTCCACAAGAATaGCAAGGTGGCGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGDFPQE*QGGDEV
Trigger: TACTTCATCGCCACCTTGTCATTCTTGTGGAAAGTC...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTTTTCTCCTCCACCTTTaGAAACACAGAAACTCACTC +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCFLLHL*KHRNSL
Trigger: GAGTGAGTTTCTGTGTTTTCAAAGGTGGAGGAGAAA...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGTACCTCAAGGCCCTCTaGCCTCAAATTAAATTGGCT +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMYLKAL*PQIKLA
Trigger: AGCCAATTTAATTTGAGGTCAGAGGGCCTTGAGGTA...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAGTTCCCACGAAGTTGTaGATGTCAATATTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPVPTKL*MSIFGS
Trigger: AGAGCCAAATATTGACATTCACAACTTCGTGGGAAC...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR GCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAAGCTGTACACGATCTTaGCCATGTCCAGGTTCACAC +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPSCTRS*PCPGSH
Trigger: GTGTGAACCTGGACATGGGCAAGATCGTGTACAGCT...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTGTGTTAGCAATTACTaGAAAATCCACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGCVSNY*KIHRWR
Trigger: CCGCCACCTGTGGATTTTGCAGTAATTGCTAACACA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCTTAACCCTTATGGCATaGATATGTGGCTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRLTLMA*ICGFCK
Trigger: CTTGCAGAAGCCACATATGCATGCCATAAGGGTTAA...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGAAAGGTTTAAAATGCTaGCCTAAAGGCACGCACGCA +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMKGLKC*PKGTHA
Trigger: TGCGTGCGTGCCTTTAGGGCAGCATTTTAAACCTTT...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATAGCTGCATGGAAGACTaGTCTCGGCCCACCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDSCMED*SRPTRV
Trigger: AACCCTGGTGGGCCGAGACCAGTCTTCCATGCAGCT...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCAAAACGTGGATGTCTTaGTTTCTGGTCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRKTWMS*FLVTRC
Trigger: ACATCTGGTGACCAGAAACCAAGACATCCACGTTTT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAACCAGCCGAAAAACGTaGATGTCTTGGTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTTSRKT*MSWFLV
Trigger: GACCAGAAACCAAGACATCCACGTTTTTCGGCTGGT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAAAAACACAGGAAACATaGTGTAAATTGTGGAGTACC +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLKTQET*CKLWST
Trigger: GGTACTCCACAATTTACACCATGTTTCCTGTGTTTT...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCATATGGCATGCATATGTaGCTTCTGCAAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPYGMHM*LLQEAT
Trigger: AGTTGCTTCTTGCAGAAGCCACATATGCATGCCATA...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGAGTGGAACTGGGATaGGAATTTTACAATGCTAGT +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNGVELG*EFYNAS
Trigger: ACTAGCATTGTAAAATTCCCATCCCAGTTCCACTCC...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCGGAGTGGAACTGGGATaGGAATTTTACAATGCTAGT +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRGVELG*EFYNAS
Trigger: ACTAGCATTGTAAAATTCCCATCCCAGTTCCACTCC...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTACTGACACGTCTGGGATaGACAATAGTACAAAATAAT +
Preference number: 4 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLLTRLG*TIVQNN
Trigger: ATTATTTTGTACTATTGTCCATCCCAGACGTGTCAG...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACTTACTTCGGGGATTTaGGGTATTCATGACACTCCG +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPLTSGI*GIHDTP
Trigger: CGGAGTGTCATGAATACCTCAAATCCCCGAAGTAAG...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAATTCATCCCGCACGATaGTGCCCATACGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPIHPAR*CPYVCF
Trigger: AAAGCAAACGTATGGGCATCATCGTGCGGGATGAAT...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCCCAAGATGCTTAAATTaGGTGATGGAGAAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGPRCLN*VMEKSA
Trigger: TGCAGACTTCTCCATCACTCAATTTAAGCATCTTGG...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATCAGCCTGCATGGTGCTaGTACAGAGGCTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDQPAWC*YRGSCE
Trigger: TTCACAGGAGCCTCTGTATCAGCACCATGCAGGCTG...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTAATATAAATGGAACTTaGGCTCTGTCCATCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PCSESCHQCCSERCLCLCNINGT*ALSIRE
Trigger: TTCCCTGATGGACAGAGCTCAAGTTCCATTTATATT...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGTATAAATCTCCCAGCTaGGCCACCAGCTTTAACATA +
Preference number: 4 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMYKSPS*ATSFNI
Trigger: TATGTTAAAGCTGGTGGCTCAGCTGGGAGATTTATA...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGCTAAAACAACTCTGCTaGAAATGTCTGAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQLKQLC*KCLRSF
Trigger: GAAGGACCTCAGACATTTTCAGCAGAGTTGTTTTAG...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTTTCTCCTCCACCTTTaGAAACACAGAAACTCACTC +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGFLLHL*KHRNSL
Trigger: GAGTGAGTTTCTGTGTTTTCAAAGGTGGAGGAGAAA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACACGCATGCTTTCAAAATaGGGATCAAAACTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTRMLSK*GSKLSH
Trigger: GTGGGACAGTTTTGATCCTCATTTTGAAAGCATGCG...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCAAACACAACAGTCACTaGCATGGCCCAGCTATATTA +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGKHNSH*HGPAIL
Trigger: TAATATAGCTGGGCCATGTCAGTGACTGTTGTGTTT...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATCAGGTACCAACGGCCTaGAAAGTGCTGAAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDQVPTA*KVLKGN
Trigger: GTTGCCCTTCAGCACTTTGCAGGCCGTTGGTACCTG...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGTAAGTACGAAATCCTaGCCAGCTGCTCAGGAATCG +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFVSTKS*PAAQES
Trigger: CGATTCCTGAGCAGCTGGGCAGGATTTCGTACTTAC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATACTGTCATGAGCCAGTaGCAGGTCTGGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDTVMSQ*QVWMVS
Trigger: GCTGACCATCCAGACCTGGCACTGGCTCATGACAGT...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTTAACCCTTATGGCATaGATATGTGGCTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGLTLMA*ICGFCK
Trigger: CTTGCAGAAGCCACATATGCATGCCATAAGGGTTAA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAAAAGGTTTAAAATGCTaGCCTAAAGGCACGCACGCA +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTKGLKC*PKGTHA
Trigger: TGCGTGCGTGCCTTTAGGGCAGCATTTTAAACCTTT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATTTCCGAGGATACCTCTaGTCTCTCTTCTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDFRGYL*SLFSGC
Trigger: GCACCCCGAGAAGAGAGACCAGAGGTATCCTCGGAA...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGAAAATCATCTCGTTCTaGGTAAGAGTGCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQKIISF*VRVPVL
Trigger: CAAGACAGGCACTCTTACCCAGAACGAGATGATTTT...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTTCAGACAGGCCCAGATaGGTCTCTTTCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSSDRPR*VSFRTL
Trigger: GAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGA...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCAATTCTTTTACGAGGTaGCAGGTGAAGTTAACTCAC +
Preference number: 4 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRNSFTR*QVKLTH
Trigger: GTGAGTTAACTTCACCTGCCACCTCGTAAAAGAATT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAAGAAATCTTCACCACTaGCTGCCTTTCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTRNLHH*LPFSKF
Trigger: GAACTTGCTGAAAGGCAGCCAGTGGTGAAGATTTCT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGACCTCAAATTAAATTaGCTGTCAAAGACTTACGGC +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNDLKLN*LSKTYG
Trigger: GCCGTAAGTCTTTGACAGCCAATTTAATTTGAGGTC...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGCAACAGTCACTGACATaGCCCAGCTATATTAACAGA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQQQSLT*PSYINR
Trigger: TCTGTTAATATAGCTGGGCCATGTCAGTGACTGTTG...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATCGGGCTTCAAAGTCCTaGTACTGCTCCTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDRASKS*YCSSAR
Trigger: TCTTGCAGAGGAGCAGTATCAGGACTTTGAAGCCCG...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTATACAGAGGCTCCTGTaGATCACGAACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSIQRLL*ITNWLR
Trigger: CCTCAGCCAGTTCGTGATTCACAGGAGCCTCTGTAT...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCACACCTCAATCAAAATTaGGAATTAAGGAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPHLNQN*ELRKRP
Trigger: TGGCCTTTTCCTTAATTCTCAATTTTGATTGAGGTG...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTGGGCGCAGGGAGCTGTaGGTTTTGCTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSGRREL*VLLSGK
Trigger: TTTTCCTGAAAGCAAAACTCACAGCTCCCTGCGCCC...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGAAAACGCTGTCCTGGTaGAAATTTGCAATGAGGATT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTSLLQPSATQKTLSW*KFAMRI
Trigger: AATCCTCATTGCAAATTTTCACCAGGACAGCGTTTT...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCAACCAGTCATTGTACTaGACAATGCCAGCCATGACC +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFNQSLY*TMPAMT
Trigger: GGTCATGGCTGGCATTGTGCAGTACAATGACTGGTT...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATGTTCCCCTTGAAATCTaGCGGCAGTGGAACAGATCC +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDVPLEI*RQWNRS
Trigger: GGATCTGTTCCACTGCCGGCAGATTTCAAGGGGAAC...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAGCTATATTAACAGACTaGGCCTCAAACCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPAILTD*ASNHAV
Trigger: CACAGCATGGTTTGAGGCGCAGTCTGTTAATATAGC...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAAGAAATCTTCACCACTaGCTGCCTTTCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPRNLHH*LPFSKF
Trigger: GAACTTGCTGAAAGGCAGCCAGTGGTGAAGATTTCT...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACATCCCTCTGGCAGAAATaGCTGAATCAGATAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTSLWQK*LNQIEK
Trigger: TTTCTCTATCTGATTCAGCCATTTCTGCCAGAGGGA...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACACAACAGTCACTGACATaGCCCAGCTATATTAACAGA +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTQQSLT*PSYINR
Trigger: TCTGTTAATATAGCTGGGCCATGTCAGTGACTGTTG...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGTACACAAGCTTTATTaGGCAACAGCAACGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFVHKLY*ATATSH
Trigger: GTGGCTCGTTGCTGTTGCCCAATAAAGCTTGTGTAC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATCTGACACGTCTGGGATaGACAATAGTACAAAATAAT +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNLTRLG*TIVQNN
Trigger: ATTATTTTGTACTATTGTCCATCCCAGACGTGTCAG...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCATTTCGGGAACAAACTaGGAGCAGGCAAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFISGTN*EQARSK
Trigger: CTTACTTCTTGCCTGCTCTCAGTTTGTTCCCGAAAT...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCCGTAATTTCTCCAGTTaGTTCATCCCGCACGATGAT +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFRNFSS*FIPHDD
Trigger: ATCATCGTGCGGGATGAATCAACTGGAGAAATTACG...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTCGTACTCATAGTACTTaGGGCAAACCTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSRTHST*GKPPGS
Trigger: ACTCCCTGGAGGTTTGCCTCAAGTACTATGAGTACG...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGACTTTCCACAAGAATaGCAAGGTGGCGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFDFPQE*QGGDEV
Trigger: TACTTCATCGCCACCTTGTCATTCTTGTGGAAAGTC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCCGCATGCTTTCAAAATaGGGATCAAAACTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFRMLSK*GSKLSH
Trigger: GTGGGACAGTTTTGATCCTCATTTTGAAAGCATGCG...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAAAAACGCTGTCCTGGTaGAAATTTGCAATGAGGATT +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTKTLSW*KFAMRI
Trigger: AATCCTCATTGCAAATTTTCACCAGGACAGCGTTTT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGGTCATCTTCCATTATaGCTCCTAACAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFGHLPL*LLTGNR
Trigger: CCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACATGCATATGTGGCTTCTaGAAGAAGCAACTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTCICGF*KKQLEN
Trigger: GTTTTCAAGTTGCTTCTTGCAGAAGCCACATATGCA...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAACATGTGCACACGCATaGTTTCAAAATGAGGATCAA +
Preference number: 4 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTTCAHA*FQNEDQ
Trigger: TTGATCCTCATTTTGAAAGCATGCGTGTGCACATGT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATTGTACATGTCCCATTTaGAATTTTGGCAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNCTCPI*NFGKGL
Trigger: TAAACCTTTGCCAAAATTGCAAATGGGACATGTACA...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTCCGACCTTTTCCCTCTaGCAGAAATGGCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSPTFSL*QKWLNQ
Trigger: CTGATTCAGCCATTTCTGCCAGAGGGAAAAGGTCGG...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTTTCCACTTCCAACTATaGCTTCTTCAGCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSFHFQL*LLQPLL
Trigger: CAGGAGGGGCTGAAGAAGCCATAGTTGGAAGTGGAA...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATCCTCAAACCATGCTGTaGCGGAGAAGACAGATTCAC +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDPQTML*RRRQIH
Trigger: GTGAATCTGTCTTCTCCGCCACAGCATGGTTTGAGG...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATTGCCTGTCTTGTCTGTaGGTAAGTACGAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDCLSCL*VSTKSC
Trigger: GCAGGATTTCGTACTTACTCACAGACAAGACAGGCA...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCCCAAGATGCTTAAATTaGGTGATGGAGAAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFPRCLN*VMEKSA
Trigger: TGCAGACTTCTCCATCACTCAATTTAAGCATCTTGG...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAACACACTATGGATGCTaGATCAGATCAAGGATAACA +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPTHYGC*IRSRIT
Trigger: TGTTATCCTTGATCTGATTCAGCATCCATAGTGTGT...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACAGAAACTCACTCAATaGATACGTCAGATTTGCTCA +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPQKLTQ*IRQICS
Trigger: TGAGCAAATCTGACGTATTCATTGAGTGAGTTTCTG...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATCCAGTAGGTATAGAGTaGACCAAGTCTCATTTCGGG +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDPVGIE*TKSHFG
Trigger: CCCGAAATGAGACTTGGTGCACTCTATACCTACTGG...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTCCAGTAGGTATAGAGTaGACCAAGTCTCATTTCGGG +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSPVGIE*TKSHFG
Trigger: CCCGAAATGAGACTTGGTGCACTCTATACCTACTGG...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATCTGATACTGCTCCTCTaGAAGAGACTTCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDLILLL*KRLLCH
Trigger: GTGGCAAAGAAGTCTCTTGCAGAGGAGCAGTATCAG...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTGTACATGTCCCATTTaGAATTTTGGCAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGCTCPI*NFGKGL
Trigger: TAAACCTTTGCCAAAATTGCAAATGGGACATGTACA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAAAAAAGTATTTGAACTaGTTGAACAGCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: YVASARSNLKTQECLALPKKYLN*LNSTPG
Trigger: TCCTGGGGTGCTGTTCAACCAGTTCAAATACTTTTT...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCTCCCTCTGGCAGAAATaGCTGAATCAGATAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFSLWQK*LNQIEK
Trigger: TTTCTCTATCTGATTCAGCCATTTCTGCCAGAGGGA...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR GCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATGGTCATCTTCCATTATaGCTCCTAACAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDGHLPL*LLTGNR
Trigger: CCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACC...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTTCTCCTCTCATTTACTaGTTACGATCCCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSSPLIY*LRSQES
Trigger: GGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGA...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTGTTTGCTTTCATAGGTaGAAGGGAAGATCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSVCFHR*KGRSVG
Trigger: TCCTACAGATCTTCCCTTTCACCTATGAAAGCAAAC...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATTATAAATCTCCCAGCTaGGCCACCAGCTTTAACATA +
Preference number: 4 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDYKSPS*ATSFNI
Trigger: TATGTTAAAGCTGGTGGCTCAGCTGGGAGATTTATA...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTAAACACAACAGTCACTaGCATGGCCCAGCTATATTA +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSKHNSH*HGPAIL
Trigger: TAATATAGCTGGGCCATGTCAGTGACTGTTGTGTTT...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR TCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTCAGAAACTCACTCAATaGATACGTCAGATTTGCTCA +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSQKLTQ*IRQICS
Trigger: TGAGCAAATCTGACGTATTCATTGAGTGAGTTTCTG...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CCA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTAATTCTTTTACGAGGTaGCAGGTGAAGTTAACTCAC +
Preference number: 4 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSNSFTR*QVKLTH
Trigger: GTGAGTTAACTTCACCTGCCACCTCGTAAAAGAATT...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 90 bp ACGATCGAATCTGAAGAAGGTCGGCGGCCGTGGGGAGCCTCTGCGTaGAGGCCACGGGAAGCCGCAGCTTCCAGTCCGTCTCCCCATCCA +
Preference number: 5 (lower is better)
Translates to: TIESEEGRRPWGASA*RPREAAASSPSPHP
Trigger: TGGATGGGGAGACGGACTGGAAGCTGCGGCTTCCCGTGGCCTGCACGCAGAGGCTCCCCACGGCCGCCGACCTTCTTCAGATTCGATCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR CAA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCCGGTACTTCTCACCCTaGACCGCCTCCGCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: FLTRLPHALPAGASIPNLRYFSP*TASAPV
Trigger: CACTGGGGCGGAGGCGGTCAAGGGTGAGAAGTACCG...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CCA 90 bp GTGCACGCGGCTGCTCATGGTCCGCCGGACCTTAGTGGTGAGCGTTaGGCCCTTCTGAGCCGGTGGGTCCTGGGATTGCTGGGTGTAAAT +
Preference number: 5 (lower is better)
Translates to: VHAAAHGPPDLSGER*ALLSRWVLGLLGVN
Trigger: ATTTACACCCAGCAATCCCAGGACCCACCGGCTCAGAAGGGCCCAACGCTCACCACTAAGGTCCGGCGGACCATGAGCAGCCGCGTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGTACACGGGAGTCACGTaGTGGCAGAGCGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMYTGVT*WQSAMA
Trigger: GGCCATCGCGCTCTGCCACAACGTGACTCCCGTGTA...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCATCACCGTGGCCACTTaGAGGGAGCGGTCGTGCACA +
Preference number: 5 (lower is better)
Translates to: FLTRLPHALPAGASIPNLITVAT*RERSCT
Trigger: TGTGCACGACCGCTCCCTCAAAGTGGCCACGGTGAT...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGATCACCGTGGCCACTTaGAGGGAGCGGTCGTGCACA +
Preference number: 5 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMITVAT*RERSCT
Trigger: TGTGCACGACCGCTCCCTCAAAGTGGCCACGGTGAT...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTAGGCTGCAGCGGGATGTaGTCCGTCATGTCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLGCSGM*SVMSAA
Trigger: CGCCGCCGACATGACGGACAACATCCCGCTGCAGCC...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS TCA 90 bp AGGAGGAAGCGGATGATCTGCAGGTACCAACGGCCTGCAAAGTGCTaGAGGGCAACCATGACCAGCGAGACCACCACCAGGGCACCAAAG +
Preference number: 5 (lower is better)
Translates to: RRKRMICRYQRPAKC*RATMTSETTTRAPK
Trigger: CTTTGGTGCCCTGGTGGTGGTCTCGCTGGTCATGGTTGCCCTTCAGCACTTTGCAGGCCGTTGGTACCTGCAGATCATCCGCTTCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGCGGTGGGTCCTGGGATaGCTGGGTGTAAATGCTGAA +
Preference number: 5 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMRWVLG*LGVNAE
Trigger: TTCAGCATTTACACCCAGCAATCCCAGGACCCACCG...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCGTCAGCATCCAAACCTaGATGCCAGCATTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: FLTRLPHALPAGASIPNLVSIQT*MPAFLR
Trigger: CCTGAGGAATGCTGGCATCAAGGTTTGGATGCTGAC...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCCGTGGCAGTTTGCACTaGAGTGTCGGTACTTCTCAC +
Preference number: 5 (lower is better)
Translates to: FLTRLPHALPAGASIPNLRGSLH*SVGTSH
Trigger: GTGAGAAGTACCGACACTCAAGTGCAAACTGCCACG...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 90 bp TGTAGGATGGTGAAGTTCAGGATCTGGTCGCCAGGGGTCCTCAGCTaGATGGAAGACTGGTCTCGGCCCACCAGGGTTAAGCCCACACTT +
Preference number: 5 (lower is better)
Translates to: CRMVKFRIWSPGVLS*MEDWSRPTRVKPTL
Trigger: AAGTGTGGGCTTAACCCTGGTGGGCCGAGACCAGTCTTCCATGCAGCTGAGGACCCCTGGCGACCAGATCCTGAACTTCACCATCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCCGGTGGGTCCTGGGATaGCTGGGTGTAAATGCTGAA +
Preference number: 5 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAARWVLG*LGVNAE
Trigger: TTCAGCATTTACACCCAGCAATCCCAGGACCCACCG...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 90 bp GGAAAACAAGAGGAGGAAGCGGATGATCTGCAGGTACCAACGGCCTaGAAAGTGCTGAAGGGCAACCATGACCAGCGAGACCACCACCAG +
Preference number: 5 (lower is better)
Translates to: GKQEEEADDLQVPTA*KVLKGNHDQRDHHQ
Trigger: CTGGTGGTGGTCTCGCTGGTCATGGTTGCCCTTCAGCACTTTGCAGGCCGTTGGTACCTGCAGATCATCCGCTTCCTCCTCTTGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CCA 90 bp CCACCACAGACCTTCCTTCTTCCCTTGTTCCCACAGAGCAGGTCCTaGTGGGTGCTGGGGTACAGAGCTAAGAAAACACAGCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: PPQTFLLPLFPQSRS*WVLGYRAKKTQPLS
Trigger: GGACAGAGGCTGTGTTTTCTTAGCTCTGTACCCCAGCACCCACCAGGACCTGCTCTGTGGGAACAAGGGAAGAAGGAAGGTCTGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477492.1
CDS-3UTR CAA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCCTTCTCGGGCCATGTaGCCACACTCTTCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAPSRAM*PHSSSN
Trigger: GTTGGAGGAAGAGTGTGGCAACATGGCCCGAGAAGG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCCTGCAAGAGACTTCTTaGCCACCACGAGCACCCGCA +
Preference number: 5 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGLQETS*PPRAPA
Trigger: TGCGGGTGCTCGTGGTGGCAAAGAAGTCTCTTGCAG...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATCGGTACTTCTCACCCTaGACCGCCTCCGCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNRYFSP*TASAPV
Trigger: CACTGGGGCGGAGGCGGTCAAGGGTGAGAAGTACCG...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGACAACGACGTGGCAGTTaGCACTTGAGTGTCGGTACT +
Preference number: 5 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRQRRGS*HLSVGT
Trigger: AGTACCGACACTCAAGTGCAAACTGCCACGTCGTTG...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 90 bp AGAGTGCCTGTCTTGTCTGTGAGTAAGTACGAAATCCTGCCCAGCTaGTCAGGAATCGTGCTGGAGCGAACCACGGTCCCGGGGATTTTC +
Preference number: 5 (lower is better)
Translates to: RVPVLSVSKYEILPS*SGIVLERTTVPGIF
Trigger: GAAAATCCCCGGGACCGTGGTTCGCTCCAGCACGATTCCTGAGCAGCTGGGCAGGATTTCGTACTTACTCACAGACAAGACAGGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CCA 90 bp CCACAGACCTTCCTTCTTCCCTTGTTCCCACAGAGCAGGTCCTGGTaGGTGCTGGGGTACAGAGCTAAGAAAACACAGCCTCTGTCCATC +
Preference number: 5 (lower is better)
Translates to: PQTFLLPLFPQSRSW*VLGYRAKKTQPLSI
Trigger: GATGGACAGAGGCTGTGTTTTCTTAGCTCTGTACCCCAGCACCCACCAGGACCTGCTCTGTGGGAACAAGGGAAGAAGGAAGGTCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477492.1
CDS-3UTR CAA 90 bp TTTCTGACGAGGCTCCCACACGCCCTGCCTGCAGGAGCCAGCATCCCGAATCTCAAGTATTTGAACTGGTaGAACAGCACCCCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: FLTRLPHALPAGASIPNLKYLNW*NSTPGR
Trigger: TCTTCCTGGGGTGCTGTTCAACCAGTTCAAATACTT...GAGATTCGGGATGCTGGCTCCTGCAGGCAGGGCGTGTGGGAGCCTCGTCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGATTTGTACTTCGTCCATaGAGTCGAGGCCGTAGGCTA +
Preference number: 5 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRFVLRP*SRGRRL
Trigger: TAGCCTACGGCCTCGACTCAATGGACGAAGTACAAA...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCTACACGGGAGTCACGTaGTGGCAGAGCGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRYTGVT*WQSAMA
Trigger: GGCCATCGCGCTCTGCCACAACGTGACTCCCGTGTA...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGACTTTCCGCTTTGGTCTaGGAGGATCTGAGTCACATC +
Preference number: 5 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRLSALV*EDLSHI
Trigger: GATGTGACTCAGATCCTCCAAGACCAAAGCGGAAAG...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGTCCCAACGCTGTAGCTaGGGCGTCCTCCCACCAGGG +
Preference number: 5 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMSQRCS*GVLPPG
Trigger: CCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGGA...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp GGGGTTCAGACAGGCCCAGATGGGTCTCTTTCAGGACCCTCCCTCCCGTTGATGCGCCAGGCAGAGGGTTaGAAGGATATGTATTCATCA +
Preference number: 5 (lower is better)
Translates to: GVQTGPDGSLSGPSLPLMRQAEG*KDMYSS
Trigger: TGATGAATACATATCCTTCAAACCCTCTGCCTGGCG...CATCAACGGGAGGGAGGGTCCTGAAAGAGACCCATCTGGGCCTGTCTGAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 90 bp AGTGACGGCCAGCACGAAGCCCAGGGGAACCCAGTAGGTATAGAGTaGACCAAGTCTCATTTCGGGAACAAACTGAGAGCAGGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: SDGQHEAQGNPVGIE*TKSHFGNKLRAGKK
Trigger: CTTCTTGCCTGCTCTCAGTTTGTTCCCGAAATGAGACTTGGTGCACTCTATACCTACTGGGTTCCCCTGGGCTTCGTGCTGGCCGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTGGAGTTAGTGCCACCTGTCTCCTCCAACCAGTCATaGTACTGCACAATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LRCALGMPSKQLELVPPVSSNQS*YCTMPA
Trigger: GGCTGGCATTGTGCAGTACAATGACTGGTTGGAGGA...GACAGGTGGCACTAACTCCAGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCCTGACCTTTCCGCTTaGGTCTTGGAGGATCTGAGT +
Preference number: 5 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAPDLSA*VLEDLS
Trigger: ACTCAGATCCTCCAAGACCAAAGCGGAAAGGTCAGG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCAAGATGCCTCTGCCTTaGTGGGGTCATCTTCCATTA +
Preference number: 5 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAKMPLP*WGHLPL
Trigger: TAATGGAAGATGACCCCACAAAGGCAGAGGCATCTT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCGTAAGAGTGCCTGTCTaGTCTGTGAGTAAGTACGAA +
Preference number: 5 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAAVRVPV*SVSKYE
Trigger: TTCGTACTTACTCACAGACAAGACAGGCACTCTTAC...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCCCGAGATGGAGCCGTTaGAAAATCATCTCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGPRWSR*KIISFW
Trigger: CCAGAACGAGATGATTTTCAAACGGCTCCATCTCGG...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATCCTTCTCGGGCCATGTaGCCACACTCTTCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNPSRAM*PHSSSN
Trigger: GTTGGAGGAAGAGTGTGGCAACATGGCCCGAGAAGG...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCCTGCAAGAGACTTCTTaGCCACCACGAGCACCCGCA +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRLQETS*PPRAPA
Trigger: TGCGGGTGCTCGTGGTGGCAAAGAAGTCTCTTGCAG...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCAATGATGAGGAATCCTaGATAGAGAGGGACGGAGGC +
Preference number: 5 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGNDEES*IERDGG
Trigger: GCCTCCGTCCCTCTCTATCAAGGATTCCTCATCATT...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp ATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAAGCACGGTGTGTGCATTCCTACCTGACCTTTCCGCTTaGGTCTTGGAGGATCTGAGT +
Preference number: 5 (lower is better)
Translates to: ILLPLRLQCLRSTVCAFLPDLSA*VLEDLS
Trigger: ACTCAGATCCTCCAAGACCAAAGCGGAAAGGTCAGG...TAGGAATGCACACACCGTGCTTCTCAGACACTGGAGACGCAAAGGCAGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCAAGATGCCTCTGCCTTaGTGGGGTCATCTTCCATTA +
Preference number: 5 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGKMPLP*WGHLPL
Trigger: TAATGGAAGATGACCCCACAAAGGCAGAGGCATCTT...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAAAACCCAAGAATGCCTaGCTCTACCACGTCCCGCGA +
Preference number: 5 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPKPKNA*LYHVPR
Trigger: TCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTT...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTACGCTGCAGGATGCTTaGCAGGTTCATTCAAAACCA +
Preference number: 5 (lower is better)
Translates to: REVCSNFKMRPWDAFQAATLQDA*QVHSKP
Trigger: TGGTTTTGAATGAACCTGCAAAGCATCCTGCAGCGT...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TGTGCATTCCTAGGTGTTCAGGGACCGTCCAGTGAATGGCGTCAGCCAGCTGCCAGGTTGAAAAAGTATTaGAACTGGTTGAACAGCACC +
Preference number: 5 (lower is better)
Translates to: CAFLGVQGPSSEWRQPAARLKKY*NWLNST
Trigger: GGTGCTGTTCAACCAGTTCAAATACTTTTTCAACCT...GGCAGCTGGCTGACGCCATTCACTGGACGGTCCCTGAACACCTAGGAATGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATCAGCTGTACACGATCTaGCCCATGTCCAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNQLYTI*PMSRFT
Trigger: TGTGAACCTGGACATGGGCAAGATCGTGTACAGCTG...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTCAGCTGTACACGATCTaGCCCATGTCCAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: PCSESCHQCCSERCLCLCQLYTI*PMSRFT
Trigger: TGTGAACCTGGACATGGGCAAGATCGTGTACAGCTG...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCTCCGATTTGACATCTTaGTCCAGGACCAGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGSDLTS*SRTREN
Trigger: GTTTTCTCTGGTCCTGGACAAAGATGTCAAATCGGA...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATAAGCTGCCACCAGTGTaGTTCCGAAAGATGCCTCTG +
Preference number: 5 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNKLPPV*FRKMPL
Trigger: CAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTTTCAGCAAGTTCCCCTaGAAATCTGCCGGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: PCSESCHQCCSERCLCLCFSKFP*KSAGSG
Trigger: TCCACTGCCGGCAGATTTCAAGGGGAACTTGCTGAA...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCTTCAGCAAGTTCCCCTaGAAATCTGCCGGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRFSKFP*KSAGSG
Trigger: TCCACTGCCGGCAGATTTCAAGGGGAACTTGCTGAA...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTCGTGGCAGTTTGCACTaGAGTGTCGGTACTTCTCAC +
Preference number: 5 (lower is better)
Translates to: PCSESCHQCCSERCLCLCRGSLH*SVGTSH
Trigger: GTGAGAAGTACCGACACTCAAGTGCAAACTGCCACG...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTCAACGACGTGGCAGTTaGCACTTGAGTGTCGGTACT +
Preference number: 5 (lower is better)
Translates to: PCSESCHQCCSERCLCLCQRRGS*HLSVGT
Trigger: AGTACCGACACTCAAGTGCAAACTGCCACGTCGTTG...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGGCACCAAAGAGGATCTaGGTGAGGCAGTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMAPKRI*VRQFTS
Trigger: GGAAGTGAACTGCCTCACCAAGATCCTCTTTGGTGC...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCTTTGTACTTCGTCCATaGAGTCGAGGCCGTAGGCTA +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRFVLRP*SRGRRL
Trigger: TAGCCTACGGCCTCGACTCAATGGACGAAGTACAAA...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCTCCTCCAACCAGTCATaGTACTGCACAATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGSSNQS*YCTMPA
Trigger: GGCTGGCATTGTGCAGTACAATGACTGGTTGGAGGA...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCGTCAGCATCCAAACCTaGATGCCAGCATTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGVSIQT*MPAFLR
Trigger: CCTGAGGAATGCTGGCATCAAGGTTTGGATGCTGAC...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AGGGAGGTCTGCTCCAACTTTAAGATGCGCCCTTGGGATGCCTTCCAAGCAGCTCATGATGGTGCTCCCTaGATAGATGCTAATCAAAAC +
Preference number: 5 (lower is better)
Translates to: REVCSNFKMRPWDAFQAAHDGAP*IDANQN
Trigger: GTTTTGATTAGCATCTATCAAGGGAGCACCATCATG...AGCTGCTTGGAAGGCATCCCAAGGGCGCATCTTAAAGTTGGAGCAGACCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATGGCCATGATGGTGCTCCCTaGATAGATGCTAATCAAAAC +
Preference number: 5 (lower is better)
Translates to: LAVKDLRPMELPGDSVNGHDGAP*IDANQN
Trigger: GTTTTGATTAGCATCTATCAAGGGAGCACCATCATG...GCCATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCCTTTCCGCTTTGGTCTaGGAGGATCTGAGTCACATC +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRLSALV*EDLSHI
Trigger: GATGTGACTCAGATCCTCCAAGACCAAAGCGGAAAG...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATTCCCAACGCTGTAGCTaGGGCGTCCTCCCACCAGGG +
Preference number: 5 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDSQRCS*GVLPPG
Trigger: CCCTGGTGGGAGGACGCCCAAGCTACAGCGTTGGGA...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAAAACCCAAGAATGCCTaGCTCTACCACGTCCCGCGA +
Preference number: 5 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTKPKNA*LYHVPR
Trigger: TCGCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CGTGTCCTCTCACCGGACTGCATCCTCCTGCCTTTGCGTCTCCAGTGTCTGAGAACTCAGGAGAGTTTCTaGTATAGTAACTCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: RVLSPDCILLPLRLQCLRTQESF*YSNSSF
Trigger: GAAACTAGAGTTACTATACAAGAAACTCTCCTGAGT...TCTCAGACACTGGAGACGCAAAGGCAGGAGGATGCAGTCCGGTGAGAGGACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCTTGTTCTGAAAGCTGCCACCAGTGTTGTTCCGAAAGATGCCTCTGCCTTTGTCGTACACAAGCTTTATaGGGCAACAGCAACGAGCCA +
Preference number: 5 (lower is better)
Translates to: PCSESCHQCCSERCLCLCRTQAL*GNSNEP
Trigger: TGGCTCGTTGCTGTTGCCCAATAAAGCTTGTGTACG...ACAAAGGCAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTTTCAGAACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 90 bp CCAAGTCGAACAGGCCGATCTTACTTCGGGGATTTGAGGTATTCATaGCACTCCGGAGTTCTCTGCCAGTGTAAAGAACAACACCCACAA +
Preference number: 5 (lower is better)
Translates to: PSRTGRSYFGDLRYS*HSGVLCQCKEQHPQ
Trigger: TTGTGGGTGTTGTTCTTTACACTGGCAGAGAACTCCGGAGTGTCATGAATACCTCAAATCCCCGAAGTAAGATCGGCCTGTTCGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 90 bp TTGCTGGGTGTAAATGCTGAAAATGTGGCTTTGTACTTCGTCCATTaGGTCGAGGCCGTAGGCTACTGTTCCGAGATGGAGCCGTTTGAA +
Preference number: 5 (lower is better)
Translates to: LLGVNAENVALYFVH*VEAVGYCSEMEPFE
Trigger: TTCAAACGGCTCCATCTCGGAACAGTAGCCTACGGCCTCGACTCAATGGACGAAGTACAAAGCCACATTTTCAGCATTTACACCCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 90 bp GGTAAAAGTTCCCACGAAGTTGTGAATGTCAATATTTGGCTCTTCTaGGTACACATACGATCGAATCTGAAGAAGGTCGGCGGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: GKSSHEVVNVNIWLF*VHIRSNLKKVGGRG
Trigger: CCCACGGCCGCCGACCTTCTTCAGATTCGATCGTATGTGTACGCAGAAGAGCCAAATATTGACATTCACAACTTCGTGGGAACTTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR CAA 90 bp TATTTCTTTGTCTTCCCCACCACAACTAAGATGACCTCCGAGAAGTACCCAGGCCCGAGATGGAGCCGTTaGAAAATCATCTCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: YFFVFPTTTKMTSEKYPGPRWSR*KIISFW
Trigger: CCAGAACGAGATGATTTTCAAACGGCTCCATCTCGG...GCCTGGGTACTTCTCGGAGGTCATCTTAGTTGTGGTGGGGAAGACAAAGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATATGGCAACTTCCGATTaGACATCTTTGTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNMATSD*TSLSRT
Trigger: GGTCCTGGACAAAGATGTCAAATCGGAAGTTGCCAT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATACGCTGCAGGATGCTTaGCAGGTTCATTCAAAACCA +
Preference number: 5 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNTLQDA*QVHSKP
Trigger: TGGTTTTGAATGAACCTGCAAAGCATCCTGCAGCGT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGCGTACACAAGCTTTATaGGGCAACAGCAACGAGCCA +
Preference number: 5 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMRTQAL*GNSNEP
Trigger: TGGCTCGTTGCTGTTGCCCAATAAAGCTTGTGTACG...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCGTAAGAGTGCCTGTCTaGTCTGTGAGTAAGTACGAA +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRVRVPV*SVSKYE
Trigger: TTCGTACTTACTCACAGACAAGACAGGCACTCTTAC...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAAAAAACGTGGATGTCTaGGTTTCTGGTCACCAGATG +
Preference number: 5 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPKNVDV*VSGHQM
Trigger: CATCTGGTGACCAGAAACCAAGACATCCACGTTTTT...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAAATGATGAGGAATCCTaGATAGAGAGGGACGGAGGC +
Preference number: 5 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTNDEES*IERDGG
Trigger: GCCTCCGTCCCTCTCTATCAAGGATTCCTCATCATT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATAGATCTCAACCACACTaGGCTCTTAAAGATCCACCA +
Preference number: 5 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNRSQPH*ALKDPP
Trigger: TGGTGGATCTTTAAGAGCCAAGTGTGGTTGAGATCT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCATCAAGGATAACAGATaGGACTTAGGACACTCTCTC +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRIKDNR*DLGHSL
Trigger: GAGAGAGTGTCCTAAGTCCAATCTGTTATCCTTGAT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCTCTGCAAGAAGCAACTaGAAAACCCAAGAATGCCTT +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRSARSN*KTQECL
Trigger: AAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGA...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACACGCCAGGCAGAGGGTTaGAAGGATATGTATTCATCA +
Preference number: 5 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTRQAEG*KDMYSS
Trigger: TGATGAATACATATCCTTCAAACCCTCTGCCTGGCG...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAAGCCAGGTACAGGGTTaGCAAAGTCTAAACAGGACT +
Preference number: 5 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTSQVQG*QSLNRT
Trigger: AGTCCTGTTTAGACTTTGCAAACCCTGTACCTGGCT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 90 bp GAAGATCCTTGTAGAGCTCAGGATACAGCATGGCAACTTCCGATTTaGCATCTTTGTCCAGGACCAGAGAAAACACAGGAAACATGGTGT +
Preference number: 5 (lower is better)
Translates to: EDPCRAQDTAWQLPI*HLCPGPEKTQETWC
Trigger: ACACCATGTTTCCTGTGTTTTCTCTGGTCCTGGACAAAGATGTCAAATCGGAAGTTGCCATGCTGTATCCTGAGCTCTACAAGGATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAGCCAAGATGCTTAAATaGAGTGATGGAGAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTAKMLK*SDGEVC
Trigger: GCAGACTTCTCCATCACTCAATTTAAGCATCTTGGC...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACAAGCCTTCTACAACCTTCAGCTACACAGGTCACATCTGCCATGTaGCCTAAAGAATTAGTTGAG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTSLLQPSATQVTSAM*PKELVE
Trigger: CTCAACTAATTCTTTAGGCAACATGGCAGATGTGAC...CTGTGTAGCTGAAGGTTGTAGAAGGCTTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp GCCTTTGTGGGGTCATCTTCCATTATGCCTCCTAACAGGAAACAGGCTTCTATGTCTGCAAGAAGCAACTaGAAAACCCAAGAATGCCTT +
Preference number: 5 (lower is better)
Translates to: AFVGSSSIMPPNRKQASMSARSN*KTQECL
Trigger: AAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGA...CATAGAAGCCTGTTTCCTGTTAGGAGGCATAATGGAAGATGACCCCACAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCATGTTTGCTTATTTCTTaGTCTTCCCCACCACAACTA +
Preference number: 5 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPCLLIS*SSPPQL
Trigger: TAGTTGTGGTGGGGAAGACAAAGAAATAAGCAAACA...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCTGTTTGCTTATTTCTTaGTCTTCCCCACCACAACTA +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRCLLIS*SSPPQL
Trigger: TAGTTGTGGTGGGGAAGACAAAGAAATAAGCAAACA...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCATGGCAACTTCCGATTaGACATCTTTGTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFMATSD*TSLSRT
Trigger: GGTCCTGGACAAAGATGTCAAATCGGAAGTTGCCAT...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TCTTCATTCTGCTTCTGCTGGAAACCTCTAAAACTTTCTGACGAGGCTCCCACAATCAAGGATAACAGATaGGACTTAGGACACTCTCTC +
Preference number: 5 (lower is better)
Translates to: SSFCFCWKPLKLSDEAPTIKDNR*DLGHSL
Trigger: GAGAGAGTGTCCTAAGTCCAATCTGTTATCCTTGAT...TGTGGGAGCCTCGTCAGAAAGTTTTAGAGGTTTCCAGCAGAAGCAGAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATAAGCTGCCACCAGTGTaGTTCCGAAAGATGCCTCTG +
Preference number: 5 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDKLPPV*FRKMPL
Trigger: CAGAGGCATCTTTCGGAACAACACTGGTGGCAGCTT...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCAAGATCTCAACCACACTaGGCTCTTAAAGATCCACCA +
Preference number: 5 (lower is better)
Translates to: YVASARSNLKTQECLALPRSQPH*ALKDPP
Trigger: TGGTGGATCTTTAAGAGCCAAGTGTGGTTGAGATCT...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AAATTGGCTGTCAAAGACTTACGGCCCATGGAGCTCCCAGGTGACAGTGTCAATACTCAGGAGAGTTTCTaGTATAGTAACTCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: KLAVKDLRPMELPGDSVNTQESF*YSNSSF
Trigger: GAAACTAGAGTTACTATACAAGAAACTCTCCTGAGT...ATTGACACTGTCACCTGGGAGCTCCATGGGCCGTAAGTCTTTGACAGCCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp AGGACACTCTCTCTCCCTCTCCTCTCATTTACTGGTTACGATCCCAGGAATCCAATGTACATGTCCCATTaGCAATTTTGGCAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: RTLSLPLLSFTGYDPRNPMYMSH*QFWQRF
Trigger: AAACCTTTGCCAAAATTGCAAATGGGACATGTACAT...TGGATTCCTGGGATCGTAACCAGTAAATGAGAGGAGAGGGAGAGAGAGTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCACGTCCCGCATGTACATGTCCCATTaGCAATTTTGGCAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: FCKKQLENPRMPCSTTSRMYMSH*QFWQRF
Trigger: AAACCTTTGCCAAAATTGCAAATGGGACATGTACAT...GCGGGACGTGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCAAGTATTTGAACTGGTaGAACAGCACCCCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFKYLNW*NSTPGR
Trigger: TCTTCCTGGGGTGCTGTTCAACCAGTTCAAATACTT...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCAAAAACGTGGATGTCTaGGTTTCTGGTCACCAGATG +
Preference number: 5 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFKNVDV*VSGHQM
Trigger: CATCTGGTGACCAGAAACCAAGACATCCACGTTTTT...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGCCAAGATGCTTAAATaGAGTGATGGAGAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFAKMLK*SDGEVC
Trigger: GCAGACTTCTCCATCACTCAATTTAAGCATCTTGGC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp CCAAATGTCACTGTCTTTTCCTCCCAAACCGACACCAAGAGCTTTCTATTTTTCGTCACATCTGCCATGTaGCCTAAAGAATTAGTTGAG +
Preference number: 5 (lower is better)
Translates to: PNVTVFSSQTDTKSFLFFVTSAM*PKELVE
Trigger: CTCAACTAATTCTTTAGGCAACATGGCAGATGTGAC...GAAAAATAGAAAGCTCTTGGTGTCGGTTTGGGAGGAAAAGACAGTGACATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp TATGTGGCTTCTGCAAGAAGCAACTTGAAAACCCAAGAATGCCTTGCTCTACCATGTGAATGTCAATATTaGGCTCTTCTGCGTACACAT +
Preference number: 5 (lower is better)
Translates to: YVASARSNLKTQECLALPCECQY*ALLRTH
Trigger: ATGTGTACGCAGAAGAGCCAAATATTGACATTCACA...TGGTAGAGCAAGGCATTCTTGGGTTTTCAAGTTGCTTCTTGCAGAAGCCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS-3UTR CAA 90 bp ATGTATTCATCAAGAAGTAAACGCAAATCCAAGATCTCAACCACACTTGGCTCTTCCGATTTGACATCTTaGTCCAGGACCAGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: MYSSRSKRKSKISTTLGSSDLTS*SRTREN
Trigger: GTTTTCTCTGGTCCTGGACAAAGATGTCAAATCGGA...AGAGCCAAGTGTGGTTGAGATCTTGGATTTGCGTTTACTTCTTGATGAATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS-3UTR CAA 90 bp ACACAAAATACAAAAGCTTATCAAGAGTGCTCCAAAGGCAAGGGACTATCTGATAGGTTGAAAAAGTATTaGAACTGGTTGAACAGCACC +
Preference number: 5 (lower is better)
Translates to: TQNTKAYQECSKGKGLSDRLKKY*NWLNST
Trigger: GGTGCTGTTCAACCAGTTCAAATACTTTTTCAACCT...ATCAGATAGTCCCTTGCCTTTGGAGCACTCTTGATAAGCTTTTGTATTTTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 72 bp GGCCTGCTGTCCATCCGCTTCTTCTGGCGCACCGGCTaGAGCGGGATGTTGTCCGTCATGTCGGCGGCGCCG +
Preference number: 6 (lower is better)
Translates to: GLLSIRFFWRTG*SGMLSVMSAAP
Trigger: CGGCGCCGCCGACATGACGGACAACATCCCGCTGCAGCCGGTGCGCCAGAAGAAGCGGATGGACAGCAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS CCA 72 bp GCTGCTCATGGTCCGCCGGACCTTAGTGGTGAGCGTTaGGCCCTTCTGAGCCGGTGGGTCCTGGGATTGCTG +
Preference number: 6 (lower is better)
Translates to: AAHGPPDLSGER*ALLSRWVLGLL
Trigger: CAGCAATCCCAGGACCCACCGGCTCAGAAGGGCCCAACGCTCACCACTAAGGTCCGGCGGACCATGAGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 72 bp CGTCCACTGTACCAGGGCCACCTCATCGGGGCTGGATaGCTGGTATACGCGGCAGGAGTCTTCGTACTGCTT +
Preference number: 6 (lower is better)
Translates to: RPLYQGHLIGAG*LVYAAGVFVLL
Trigger: AAGCAGTACGAAGACTCCTGCCGCGTATACCAGGCATCCAGCCCCGATGAGGTGGCCCTGGTACAGTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CCA 72 bp CACTGTACCAGGGCCACCTCATCGGGGCTGGATGCCTaGTATACGCGGCAGGAGTCTTCGTACTGCTTCTCG +
Preference number: 6 (lower is better)
Translates to: HCTRATSSGLDA*YTRQESSYCFS
Trigger: CGAGAAGCAGTACGAAGACTCCTGCCGCGTATACCAGGCATCCAGCCCCGATGAGGTGGCCCTGGTACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CCA 72 bp AGTTCAGGATCTGGTCGCCAGGGGTCCTCAGCTGCATaGAAGACTGGTCTCGGCCCACCAGGGTTAAGCCCA +
Preference number: 6 (lower is better)
Translates to: SSGSGRQGSSAA*KTGLGPPGLSP
Trigger: TGGGCTTAACCCTGGTGGGCCGAGACCAGTCTTCCATGCAGCTGAGGACCCCTGGCGACCAGATCCTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 72 bp GGTACCAACGGCCTGCAAAGTGCTGAAGGGCAACCATaGCCAGCGAGACCACCACCAGGGCACCAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: GTNGLQSAEGQP*PARPPPGHQRG
Trigger: TCCTCTTTGGTGCCCTGGTGGTGGTCTCGCTGGTCATGGTTGCCCTTCAGCACTTTGCAGGCCGTTGGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 72 bp CGGATGATCTGCAGGTACCAACGGCCTGCAAAGTGCTaGAGGGCAACCATGACCAGCGAGACCACCACCAGG +
Preference number: 6 (lower is better)
Translates to: RMICRYQRPAKC*RATMTSETTTR
Trigger: CCTGGTGGTGGTCTCGCTGGTCATGGTTGCCCTTCAGCACTTTGCAGGCCGTTGGTACCTGCAGATCATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CCA 72 bp AGTACGAAATCCTGCCCAGCTGCTCAGGAATCGTGCTaGAGCGAACCACGGTCCCGGGGATTTTCGAGTCCC +
Preference number: 6 (lower is better)
Translates to: STKSCPAAQESC*SEPRSRGFSSP
Trigger: GGGACTCGAAAATCCCCGGGACCGTGGTTCGCTCCAGCACGATTCCTGAGCAGCTGGGCAGGATTTCGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 72 bp CGGCAGGAGTCTTCGTACTGCTTCTCGGCCTCAGCCTaGTCAGTCACACCGTTGGACTCATACACGGGAGTC +
Preference number: 6 (lower is better)
Translates to: RQESSYCFSASA*SVTPLDSYTGV
Trigger: GACTCCCGTGTATGAGTCCAACGGTGTGACTGATCAGGCTGAGGCCGAGAAGCAGTACGAAGACTCCTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 72 bp GAGGAGGAAGCGGATGATCTGCAGGTACCAACGGCCTaGAAAGTGCTGAAGGGCAACCATGACCAGCGAGAC +
Preference number: 6 (lower is better)
Translates to: EEEADDLQVPTA*KVLKGNHDQRD
Trigger: GTCTCGCTGGTCATGGTTGCCCTTCAGCACTTTGCAGGCCGTTGGTACCTGCAGATCATCCGCTTCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 72 bp GTAAGTACGAAATCCTGCCCAGCTGCTCAGGAATCGTaGTGGAGCGAACCACGGTCCCGGGGATTTTCGAGT +
Preference number: 6 (lower is better)
Translates to: VSTKSCPAAQES*WSEPRSRGFSS
Trigger: ACTCGAAAATCCCCGGGACCGTGGTTCGCTCCAGCACGATTCCTGAGCAGCTGGGCAGGATTTCGTACTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 72 bp GTCTTGTCTGTGAGTAAGTACGAAATCCTGCCCAGCTaGTCAGGAATCGTGCTGGAGCGAACCACGGTCCCG +
Preference number: 6 (lower is better)
Translates to: VLSVSKYEILPS*SGIVLERTTVP
Trigger: CGGGACCGTGGTTCGCTCCAGCACGATTCCTGAGCAGCTGGGCAGGATTTCGTACTTACTCACAGACAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 72 bp GAACAACACCCACAACAGTACCTGATGCGACCACAGTaGCAGCCCACAGCGTGTTCTCTATGCTCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: EQHPQQYLMRPQ*QPTACSLCSGS
Trigger: AGAGCCTGAGCATAGAGAACACGCTGTGGGCTGGCACTGTGGTCGCATCAGGTACTGTTGTGGGTGTTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS CCA 72 bp GACCTTAGTGGTGAGCGTTGGGCCCTTCTGAGCCGGTaGGTCCTGGGATTGCTGGGTGTAAATGCTGAAAAT +
Preference number: 6 (lower is better)
Translates to: DLSGERWALLSR*VLGLLGVNAEN
Trigger: ATTTTCAGCATTTACACCCAGCAATCCCAGGACCCACCGGCTCAGAAGGGCCCAACGCTCACCACTAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CCA 72 bp CCGCGGTTGGTCACCAGCCGAAAAACGTGGATGTCTTaGTTTCTGGTCACCAGATGTGCATTCTTCGCTGTG +
Preference number: 6 (lower is better)
Translates to: PRLVTSRKTWMS*FLVTRCAFFAV
Trigger: CACAGCGAAGAATGCACATCTGGTGACCAGAAACCAAGACATCCACGTTTTTCGGCTGGTGACCAACCGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CCA 72 bp ACCTTCCTTCTTCCCTTGTTCCCACAGAGCAGGTCCTaGTGGGTGCTGGGGTACAGAGCTAAGAAAACACAG +
Preference number: 6 (lower is better)
Translates to: TFLLPLFPQSRS*WVLGYRAKKTQ
Trigger: CTGTGTTTTCTTAGCTCTGTACCCCAGCACCCACCAGGACCTGCTCTGTGGGAACAAGGGAAGAAGGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477492.1
CDS CAA 72 bp CGGGCCATGTTGCCACACTCTTCCTCCAACCAGTCATaGTACTGCACAATGCCAGCCATGACCACATCTGCT +
Preference number: 6 (lower is better)
Translates to: RAMLPHSSSNQS*YCTMPAMTTSA
Trigger: AGCAGATGTGGTCATGGCTGGCATTGTGCAGTACAATGACTGGTTGGAGGAAGAGTGTGGCAACATGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CAA 72 bp CCCGCGGTTGGTCACCAGCCGAAAAACGTGGATGTCTaGGTTTCTGGTCACCAGATGTGCATTCTTCGCTGT +
Preference number: 6 (lower is better)
Translates to: PAVGHQPKNVDV*VSGHQMCILRC
Trigger: ACAGCGAAGAATGCACATCTGGTGACCAGAAACCAAGACATCCACGTTTTTCGGCTGGTGACCAACCGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 72 bp GAGCCGGTGGGTCCTGGGATTGCTGGGTGTAAATGCTaGAAATGTGGCTTTGTACTTCGTCCATTGAGTCGA +
Preference number: 6 (lower is better)
Translates to: EPVGPGIAGCKC*KCGFVLRPLSR
Trigger: TCGACTCAATGGACGAAGTACAAAGCCACATTTTCAGCATTTACACCCAGCAATCCCAGGACCCACCGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 72 bp TTCCAAGTCGAACAGGCCGATCTTACTTCGGGGATTTaGGGTATTCATGACACTCCGGAGTTCTCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: FQVEQADLTSGI*GIHDTPEFSAS
Trigger: ACTGGCAGAGAACTCCGGAGTGTCATGAATACCTCAAATCCCCGAAGTAAGATCGGCCTGTTCGACTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 72 bp GTAAATGCTGAAAATGTGGCTTTGTACTTCGTCCATTaGGTCGAGGCCGTAGGCTACTGTTCCGAGATGGAG +
Preference number: 6 (lower is better)
Translates to: VNAENVALYFVH*VEAVGYCSEME
Trigger: CTCCATCTCGGAACAGTAGCCTACGGCCTCGACTCAATGGACGAAGTACAAAGCCACATTTTCAGCATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 72 bp ACAGGCCGATCTTACTTCGGGGATTTGAGGTATTCATaGCACTCCGGAGTTCTCTGCCAGTGTAAAGAACAA +
Preference number: 6 (lower is better)
Translates to: TGRSYFGDLRYS*HSGVLCQCKEQ
Trigger: TTGTTCTTTACACTGGCAGAGAACTCCGGAGTGTCATGAATACCTCAAATCCCCGAAGTAAGATCGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 72 bp TGTAGAGCTCAGGATACAGCATGGCAACTTCCGATTTaGCATCTTTGTCCAGGACCAGAGAAAACACAGGAA +
Preference number: 6 (lower is better)
Translates to: CRAQDTAWQLPI*HLCPGPEKTQE
Trigger: TTCCTGTGTTTTCTCTGGTCCTGGACAAAGATGTCAAATCGGAAGTTGCCATGCTGTATCCTGAGCTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS GCA 72 bp TCCCACGAAGTTGTGAATGTCAATATTTGGCTCTTCTaGGTACACATACGATCGAATCTGAAGAAGGTCGGC +
Preference number: 6 (lower is better)
Translates to: SHEVVNVNIWLF*VHIRSNLKKVG
Trigger: GCCGACCTTCTTCAGATTCGATCGTATGTGTACGCAGAAGAGCCAAATATTGACATTCACAACTTCGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338821.6
CDS CAA 72 bp GGTGTAAATTGTGGAGTACCCAATGATGAGGAATCCTaGATAGAGAGGGACGGAGGCAAAGTAAAACACGGA +
Preference number: 6 (lower is better)
Translates to: GVNCGVPNDEES*IERDGGKVKHG
Trigger: TCCGTGTTTTACTTTGCCTCCGTCCCTCTCTATCAAGGATTCCTCATCATTGGGTACTCCACAATTTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS CAA 72 bp TCAGGATACAGCATGGCAACTTCCGATTTGACATCTTaGTCCAGGACCAGAGAAAACACAGGAAACATGGTG +
Preference number: 6 (lower is better)
Translates to: SGYSMATSDLTS*SRTRENTGNMV
Trigger: CACCATGTTTCCTGTGTTTTCTCTGGTCCTGGACAAAGATGTCAAATCGGAAGTTGCCATGCTGTATCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311637.9
ENST00000338821.6
CDS TCA 72 bp AGCACCCCAGGAAGAAAGGTGAAGAAATTGTACTTCTaGTTGTTGATGACATTCCGAGGATACCTCTGGTCT +
Preference number: 6 (lower is better)
Translates to: STPGRKVKKLYF*LLMTFRGYLWS
Trigger: AGACCAGAGGTATCCTCGGAATGTCATCAACAATCAGAAGTACAATTTCTTCACCTTTCTTCCTGGGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311637.9
ENST00000338821.6
ENST00000477492.1
CDS TCA 72 bp TCGCTGTCTTCTCGGGTAAAAGTTCCCACGAAGTTGTaGATGTCAATATTTGGCTCTTCTGCGTACACATAC +
Preference number: 6 (lower is better)
Translates to: SLSSRVKVPTKL*MSIFGSSAYTY
Trigger: GTATGTGTACGCAGAAGAGCCAAATATTGACATTCACAACTTCGTGGGAACTTTTACCCGAGAAGACAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338821.6