RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP8B4 (Homo sapiens)

Ensembl gene IDs: ENSG00000104043

Ensembl transcript IDs: ENST00000284509.11, ENST00000557955.5, ENST00000558024.1, ENST00000558458.1, ENST00000558829.1, ENST00000558906.5, ENST00000558959.5, ENST00000559726.5, ENST00000559829.5, ENST00000559998.1, ENST00000560161.1, ENST00000561104.1, ENST00000561385.5, ENST00000674213.1

Found 906 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGC +
Preference number: 1 (lower is better)
Translates to: ALAVVCRRFKLSEAI*LPHLLPQISNSGAS
Trigger: GCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR GCA 90 bp CTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTaGGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCTTTT +
Preference number: 1 (lower is better)
Translates to: LLGEQKHIQTFLSLT*GSEAFGYLEALPSF
Trigger: AAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR TCA 90 bp GACAGTGACCCTCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAG +
Preference number: 1 (lower is better)
Translates to: DSDPLAWFSIAHTPV*WALAVVCRRFKLSE
Trigger: CTCACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR GCA 90 bp CTCAATCTGCCCCAGTTCCTCATTGAGCGTGGTCGTTCGAGCCACTaGAGGTATTGCTTTTCGAGAATAATACATCTTCCGGTCCCAGTT +
Preference number: 1 (lower is better)
Translates to: LNLPQFLIERGRSSH*RYCFSRIIHLPVPV
Trigger: AACTGGGACCGGAAGATGTATTATTCTCGAAAAGCAATACCTGCAGTGGCTCGAACGACCACGCTCAATGAGGAACTGGGGCAGATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR TCA 90 bp CTTGTAACAGCGAGTGTTTTGTCCACCAAATCACAAACCAGACAGTaGCCCTCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATG +
Preference number: 1 (lower is better)
Translates to: LVTASVLSTKSQTRQ*PSGLVFHSAHSCLM
Trigger: CATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACAAAACACTCGCTGTTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR GCA 90 bp CATCTTATGCCACTCTTTAAAGTACTTGTCATCCAGGTCTCTGTATaGGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCACTGAG +
Preference number: 1 (lower is better)
Translates to: HLMPLFKVLVIQVSV*DGQGPKAFPCKFTE
Trigger: CTCAGTGAATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATGACAAGTACTTTAAAGAGTGGCATAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CCA 90 bp CAAAGTCTCAGTTCTCTCCCAGTTCCCCATCTAGTGCCCTTACACTaGAGCTACCTTGATTCCACGCACAGAGTATGTTCTAACAGACAC +
Preference number: 1 (lower is better)
Translates to: QSLSSLPVPHLVPLH*SYLDSTHRVCSNRH
Trigger: GTGTCTGTTAGAACATACTCTGTGCGTGGAATCAAGGTAGCTCCAGTGTAAGGGCACTAGATGGGGAACTGGGAGAGAACTGAGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558024.1
3UTR TCA 90 bp TGTACTTCTTCACCAGCTCTACCACTTGGGCTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCTA +
Preference number: 1 (lower is better)
Translates to: CTSSPALPLGLSGVE*PCSKLQSYTCKQVL
Trigger: TAGAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTGAAGAAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CCA 90 bp ACAGCATTTCTGTACTTCTTCACCAGCTCTACCACTTGGGCTTTCTaGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAA +
Preference number: 1 (lower is better)
Translates to: TAFLYFFTSSTTWAF*SGVTLQQITVLHMQ
Trigger: TTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTGAAGAAGTACAGAAATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR GCA 90 bp TCATCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATaGCACTCTTTAAAGTACTTGTCATCCAGGTCTCTGTATGCGATG +
Preference number: 1 (lower is better)
Translates to: SSLSSVAAFASSSIL*HSLKYLSSRSLYAM
Trigger: CATCGCATACAGAGACCTGGATGACAAGTACTTTAAAGAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558458.1
ENST00000558906.5
ENST00000559726.5
3UTR CCA 90 bp AGTCTGCTGATATCTGCTCCAAGTTCTGAAGTAACTGATAGTGCATaGCGGACTTTTAGGTTCGTTTCCCCATCAAGCTCAGCAGTTTCA +
Preference number: 1 (lower is better)
Translates to: SLLISAPSSEVTDSA*RTFRFVSPSSSAVS
Trigger: TGAAACTGCTGAGCTTGATGGGGAAACGAACCTAAAAGTCCGCCATGCACTATCAGTTACTTCAGAACTTGGAGCAGATATCAGCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CCA 90 bp ACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTaGGTCAGGGAATGTCGTGCATTACCAACAAATGGAAACTGGTTT +
Preference number: 1 (lower is better)
Translates to: TEATVVKRITSQMHF*VRECRALPTNGNWF
Trigger: AAACCAGTTTCCATTTGTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR TCA 90 bp AGAACACAGAGCTCTTCTCTCCTTCATTCCAAAAGAGGAAAGTTCTaGATTGGTCCCCAGTTTGACTCTCCCAGATTGAATTTCCTATTG +
Preference number: 1 (lower is better)
Translates to: RTQSSSLLHSKRGKF*IGPQFDSPRLNFLL
Trigger: CAATAGGAAATTCAATCTGGGAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTTGGAATGAAGGAGAGAAGAGCTCTGTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR TCA 90 bp TCTGACATTACAGTGTGGCAGAGAGCAAGTAACCTAAGGAATTCATaGACTTTGGGATCACCCATTTTAATGGATTCCATCAGATGGTGG +
Preference number: 1 (lower is better)
Translates to: SDITVWQRASNLRNS*TLGSPILMDSIRWW
Trigger: CCACCATCTGATGGAATCCATTAAAATGGGTGATCCCAAAGTTCATGAATTCCTTAGGTTACTTGCTCTCTGCCACACTGTAATGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR TCA 90 bp TTGTTGTCCTGGCTGAACAGACAGGTAGATATCAAGACTAAAGAGTaGCATGCAACTCAGTCTGAAAGCAACACAGTACACGCTTTAAAT +
Preference number: 1 (lower is better)
Translates to: LLSWLNRQVDIKTKE*HATQSESNTVHALN
Trigger: ATTTAAAGCGTGTACTGTGTTGCTTTCAGACTGAGTTGCATGTCACTCTTTAGTCTTGATATCTACCTGTCTGTTCAGCCAGGACAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR TCA 90 bp GCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCACCTaGAGTGAAAAGATAACTACGTGGTTTAAATTCATATTGACTCAC +
Preference number: 1 (lower is better)
Translates to: ASNLKLWSQQNFSST*SEKITTWFKFILTH
Trigger: GTGAGTCAATATGAATTTAAACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR TCA 90 bp AAAGAGGAAAGTTCTGAATTGGTCCCCAGTTTGACTCTCCCAGATTaGATTTCCTATTGCAAGAATAATTCCCAAGCATATCAGAAACCC +
Preference number: 1 (lower is better)
Translates to: KEESSELVPSLTLPD*ISYCKNNSQAYQKP
Trigger: GGGTTTCTGATATGCTTGGGAATTATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR TCA 90 bp TCTCCTTCATTCCAAAAGAGGAAAGTTCTGAATTGGTCCCCAGTTTaGCTCTCCCAGATTGAATTTCCTATTGCAAGAATAATTCCCAAG +
Preference number: 1 (lower is better)
Translates to: SPSFQKRKVLNWSPV*LSQIEFPIARIIPK
Trigger: CTTGGGAATTATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTTGGAATGAAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR GCA 90 bp ACTGAGAGCTTTTTGAATAAATTTGATCAAATTACCAGCCTATCCTaGTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAA +
Preference number: 1 (lower is better)
Translates to: TESFLNKFDQITSLS*CKDVQSPLSLDWYK
Trigger: TTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGTAATTTGATCAAATTTATTCAAAAAGCTCTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR GCA 90 bp GAGAGCTTTTTGAATAAATTTGATCAAATTACCAGCCTATCCTGCTaGAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAAT +
Preference number: 1 (lower is better)
Translates to: ESFLNKFDQITSLSC*KDVQSPLSLDWYKN
Trigger: ATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGTAATTTGATCAAATTTATTCAAAAAGCTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR CCA 90 bp ACGTGGTTTAAATTCATATTGACTCACAGTTTCACTGTTTTATCCTaGCTAAAGCTGCTCACGGTGTCTGTGGTTTTCTTACATAAATTT +
Preference number: 1 (lower is better)
Translates to: TWFKFILTHSFTVLS*LKLLTVSVVFLHKF
Trigger: AAATTTATGTAAGAAAACCACAGACACCGTGAGCAGCTTTAGCCAGGATAAAACAGTGAAACTGTGAGTCAATATGAATTTAAACCACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp CCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCTTTaGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTA +
Preference number: 2 (lower is better)
Translates to: PAGPRPSATWRPCLL*SLLPPADLITQGWV
Trigger: TACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp CAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTaGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCT +
Preference number: 2 (lower is better)
Translates to: QTFLSLTCGSEAFGY*EALPSFEPSATGGS
Trigger: AGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp TTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTaGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCA +
Preference number: 2 (lower is better)
Translates to: LSLTCGSEAFGYLEA*PSFEPSATGGSDHS
Trigger: TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAGCCCCAGTTCCTCATTaGGCGTGGTCGTTCGAGCCA +
Preference number: 2 (lower is better)
Translates to: AICLPHLLPQISNSGASRAPVPH*AWSFEP
Trigger: TGGCTCGAACGACCACGCTCAATGAGGAACTGGGGC...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp GCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTaGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: ALHSLLGEQKHIQTF*SLTCGSEAFGYLEA
Trigger: GGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGAHTPV*WALAVV
Trigger: GACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGC...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFAHTPV*WALAVV
Trigger: GACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGC...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCACATGCAACTCAGTCTaGAAGCAACACAGTACACGC +
Preference number: 2 (lower is better)
Translates to: LELDLRVRGLRLLGGLAFTCNSV*KQHSTR
Trigger: GCGTGTACTGTGTTGCTTTCAGACTGAGTTGCATGT...GAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 2 (lower is better)
Translates to: SATWRPCLLLSLLPPADLACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTTTCTTGAGCTTGACCTaGGGGTCCGAGGCCTTCGGC +
Preference number: 2 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCFLSLT*GSEAFG
Trigger: GCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAA...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp CATAGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTaGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: HSLLGEQKHIQTFLS*TCGSEAFGYLEALP
Trigger: AGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGCTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAG +
Preference number: 2 (lower is better)
Translates to: SATWRPCLLLSLLPPADLLSGVE*PCSKLQ
Trigger: CTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAG...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 2 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEAACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp ATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: IQVSVCDGQGPKAFPCKFVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...GAATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCCTGGCTAAGACTGCTTaGAATCCTTCCTGGCCGCTG +
Preference number: 2 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFLAKTA*NPSWPL
Trigger: CAGCGGCCAGGAAGGATTGCAAGCAGTCTTAGCCAG...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATTCTTGAGCTTGACCTaGGGGTCCGAGGCCTTCGGC +
Preference number: 2 (lower is better)
Translates to: PHLLPQISNSGASRISAPFLSLT*GSEAFG
Trigger: GCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAA...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCACCGAAGGCCTTCCCCTaGAAATTCACTGAGGTGGTC +
Preference number: 2 (lower is better)
Translates to: LEALPSFEPSATGGSDHSPKAFP*KFTEVV
Trigger: GACCACCTCAGTGAATTTGCAGGGGAAGGCCTTCGG...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTACCACTTGGGCTTTCTaGAGTGGAGTGACCCTGCAG +
Preference number: 2 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQITTWAF*SGVTLQ
Trigger: CTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp CTGGTTTGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTGCTTGCAATCCTTCCTaGCCGCTGATGCCAACACCA +
Preference number: 2 (lower is better)
Translates to: LVCRAGDSPRCSGHSHPGACNPS*PLMPTP
Trigger: TGGTGTTGGCATCAGCGGCCAGGAAGGATTGCAAGC...ACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACAAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp CTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCTTCCAAAACACCAGCTaGTATTTCTCAGGATGCAGC +
Preference number: 2 (lower is better)
Translates to: LELDLRVRGLRLLGGLAFFQNTS*YFSGCS
Trigger: GCTGCATCCTGAGAAATACCAGCTGGTGTTTTGGAA...GAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCATTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPLSEAI*LPHLLP
Trigger: AGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGGTATCCAAGGCTATCTaGACACTGACCACAATGACC +
Preference number: 2 (lower is better)
Translates to: SATWRPCLLLSLLPPADLVSKAI*TLTTMT
Trigger: GGTCATTGTGGTCAGTGTGCAGATAGCCTTGGATAC...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp CTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCACTGGTTTGGGAAGATaGCAAAGATGCCATTACTGT +
Preference number: 2 (lower is better)
Translates to: LELDLRVRGLRLLGGLAFTGLGR*QRCHYC
Trigger: ACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGT...GAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGACTGTTTGATGGGCACTaGCAGTTGTCTGCCGCAGAT +
Preference number: 2 (lower is better)
Translates to: AICLPHLLPQISNSGASRLFDGH*QLSAAD
Trigger: ATCTGCGGCAGACAACTGCCAGTGCCCATCAAACAG...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CCA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTACCAGCTCTACCACTTaGGCTTTCTGGAGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGTSSTT*AFWSGV
Trigger: CACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGT...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTTCACAAACCAGACAGTaGCCCTCTGGCCTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCSQTRQ*PSGLVF
Trigger: GAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGA...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAACCCTGCAAGTCTGCTaGTATCTGCTCCAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: LEALPSFEPSATGGSDHSTLQVC*YLLQVL
Trigger: CAGAACTTGGAGCAGATATCAGCAGACTTGCAGGGT...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCTTATCTTCTCATTGTTaGGGGAATGCTTGCTGTCTT +
Preference number: 2 (lower is better)
Translates to: LELDLRVRGLRLLGGLAFLSSHC*GNACCL
Trigger: AAGACAGCAAGCATTCCCTCAACAATGAGAAGATAA...GAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp ATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCCAGGGCCTTGGTGTTTaGGTAACGGCAATAAGTCAG +
Preference number: 2 (lower is better)
Translates to: IQVSVCDGQGPKAFPCKFQGLGV*VTAISQ
Trigger: CTGACTTATTGCCGTTACTCAAACACCAAGGCCCTG...GAATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558458.1
3UTR-3UTR GCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 2 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: PHLLPQISNSGASRISAPVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIAVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCTTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSLSEAI*LPHLLP
Trigger: AGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGCTACTTGGAGGCCTTaGCTTCTTTTGAGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFATWRP*LLLSLL
Trigger: CAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGC...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCATTGGGCTTTCTGGAGTaGAGTGACCCTGCAGCAAAT +
Preference number: 2 (lower is better)
Translates to: LEALPSFEPSATGGSDHSLGFLE*SDPAAN
Trigger: ATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAA...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGACCACTTGGGCTTTCTaGAGTGGAGTGACCCTGCAG +
Preference number: 2 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGTTWAF*SGVTLQ
Trigger: CTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCACCAGCTCTACCACTTaGGCTTTCTGGAGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSTSSTT*AFWSGV
Trigger: CACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGT...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCCAGTCCACGCTGTTCTaGTCACTCACATCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSQSTLF*SLTSWS
Trigger: TGACCAGGATGTGAGTGACCAGAACAGCGTGGACTG...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTAGGCCTTCGGCTACTTaGAGGCCTTGCCTTCTTTTG +
Preference number: 2 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCRPSAT*RPCLLL
Trigger: CAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCT...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCACATGCAACTCAGTCTaGAAGCAACACAGTACACGC +
Preference number: 2 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFTCNSV*KQHSTR
Trigger: GCGTGTACTGTGTTGCTTTCAGACTGAGTTGCATGT...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCCTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAG +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSLSGVE*PCSKLQ
Trigger: CTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAG...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCATGTCTTTTCCAGCCCTaGTGTTGGGGGTGGATTTTT +
Preference number: 2 (lower is better)
Translates to: LEALPSFEPSATGGSDHSCLFQP*CWGWIF
Trigger: AAAAATCCACCCCCAACATCAGGGCTGGAAAAGACA...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGCAGTCCACGCTGTTCTaGTCACTCACATCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGQSTLF*SLTSWS
Trigger: TGACCAGGATGTGAGTGACCAGAACAGCGTGGACTG...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCACATGCAACTCAGTCTaGAAGCAACACAGTACACGC +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSTCNSV*KQHSTR
Trigger: GCGTGTACTGTGTTGCTTTCAGACTGAGTTGCATGT...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGAATTCTCTATCCGCTTaGGATTTGACTGAGAAATCC +
Preference number: 2 (lower is better)
Translates to: SATWRPCLLLSLLPPADLNSLSA*DLTEKS
Trigger: GGATTTCTCAGTCAAATCTCAAGCGGATAGAGAATT...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTACCAGCCTATCCTGCTaGAAAGATGTTCAGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCTSLSC*KDVQSP
Trigger: AGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGT...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCACTGGTTTGGGAAGATaGCAAAGATGCCATTACTGT +
Preference number: 2 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEATGLGR*QRCHYC
Trigger: ACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGT...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCAAAATGTACTCAATCTaGCCCAGTTCCTCATTGAGC +
Preference number: 2 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEAKMYSI*PSSSLS
Trigger: GCTCAATGAGGAACTGGGGCAGATTGAGTACATTTT...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACACCAGCTCTACCACTTaGGCTTTCTGGAGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHTSSTT*AFWSGV
Trigger: CACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGT...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp TGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACCTCTaGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: CRRFKLSEAICLPHL*PQISNSGASRISAP
Trigger: TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACCAGCTCCACCTGAAGTaGAAAGATAACTACGTGGTT +
Preference number: 2 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHQLHLK*KDNYVV
Trigger: AACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTG...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: DVINESPVTGIQGYLHTDAHTPV*WALAVV
Trigger: GACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGC...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTATGCCAACACCAATGTaGGCACTTTTAATCATGCTG +
Preference number: 2 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGMPTPM*ALLIML
Trigger: CAGCATGATTAAAAGTGCTCACATTGGTGTTGGCAT...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCGCCCCAGTTCCTCATTaGGCGTGGTCGTTCGAGCCA +
Preference number: 2 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISAPVPH*AWSFEP
Trigger: TGGCTCGAACGACCACGCTCAATGAGGAACTGGGGC...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATGCGCTATTCTCTTCTaGCATTACAGTGTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: PHLLPQISNSGASRISAPCAILF*HYSVAE
Trigger: CTCTGCCACACTGTAATGTCAGAAGAGAATAGCGCA...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAAGCCCCTTCATCAGGTaGCTGAACTTGGTAAATCAG +
Preference number: 2 (lower is better)
Translates to: PHLLPQISNSGASRISAPSPFIR*LNLVNQ
Trigger: CTGATTTACCAAGTTCAGTCACCTGATGAAGGGGCT...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR TCA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTTGTTTTGCTTTCCTaGGTTCTTCTCTCACTTCCA +
Preference number: 2 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEAFVLLS*VLLSLP
Trigger: TGGAAGTGAGAGAAGAACTCAGGAAAGCAAAACAAA...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGTCAGGGAATGTCGTaGATTACCAACAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: LEALPSFEPSATGGSDHSGQGMS*ITNKWK
Trigger: TTTCCATTTGTTGGTAATGCACGACATTCCCTGACC...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp CTGGTTTGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTTGGTATTTCTCAGGATaGAGCCTCTCAGGATTATCT +
Preference number: 2 (lower is better)
Translates to: LVCRAGDSPRCSGHSHPGWYFSG*SLSGLS
Trigger: AGATAATCCTGAGAGGCTGCATCCTGAGAAATACCA...ACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACGGTCGTTCGAGCCACTaGAGGTATTGCTTTTCGAGA +
Preference number: 2 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHGRSSH*RYCFSR
Trigger: TCTCGAAAAGCAATACCTGCAGTGGCTCGAACGACC...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCCAACAAATGGAAACTaGTTTGGGAAGATGCCAAAG +
Preference number: 2 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQIPTNGN*FGKMPK
Trigger: CTTTGGCATCTTCCCAAACCAGTTTCCATTTGTTGG...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCTTCACTGTTTTATCCTaGCTAAAGCTGCTCACGGTG +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSFTVLS*LKLLTV
Trigger: CACCGTGAGCAGCTTTAGCCAGGATAAAACAGTGAA...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp GCAGCATTCGCATCTTCAAGCATCTTATGCCACTCTTTAAAGTACTaGTCATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: AAFASSSILCHSLKY*SSRSLYAMAKVRRP
Trigger: AGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATGACAAGTACTTTAAAGAGTGGCATAAGATGCTTGAAGATGCGAATGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558458.1
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCTTTATCACAAACCAGACAGTaGCCCTCTGGCCTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: SLSSVAAFASSSILCHSLSQTRQ*PSGLVF
Trigger: GAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGA...TAAAGAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAAGCATGTCCTTACATaGCACAGACTGAGAGCTTTT +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSKHVLT*HRLRAF
Trigger: AAAAGCTCTCAGTCTGTGTCATGTAAGGACATGCTT...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACTTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDLSEAI*LPHLLP
Trigger: AGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGCTGGCTAAGACTGCTTaGAATCCTTCCTGGCCGCTG +
Preference number: 2 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKLAKTA*NPSWPL
Trigger: CAGCGGCCAGGAAGGATTGCAAGCAGTCTTAGCCAG...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTTGGTATTTCTCAGGATaGAGCCTCTCAGGATTATCT +
Preference number: 2 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCWYFSG*SLSGLS
Trigger: AGATAATCCTGAGAGGCTGCATCCTGAGAAATACCA...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCTCAAATCTCAAACTCTaGAGCCAGCAGAATTTCAGC +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSSNLKL*SQQNFS
Trigger: GCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGA...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CCA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCTTGGGCTTTCTGGAGTaGAGTGACCCTGCAGCAAAT +
Preference number: 2 (lower is better)
Translates to: LEWSDPAANYSLTHASKFLGFLE*SDPAAN
Trigger: ATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAA...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTGCTTGCAATCCTTCCTaGCCGCTGATGCCAACACCA +
Preference number: 2 (lower is better)
Translates to: APFYPPEDPFSEYAALQVACNPS*PLMPTP
Trigger: TGGTGTTGGCATCAGCGGCCAGGAAGGATTGCAAGC...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCCAAATGAATAGTCGCTaGCTAAGACTGCTTGCAATC +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSQMNSR*LRLLAI
Trigger: GATTGCAAGCAGTCTTAGCCAGCGACTATTCATTTG...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTGCATTACCAACAAATaGAAACTGGTTTGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEACITNK*KLVWED
Trigger: ATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCA...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp GGCCAAAGTAACAGCATTTCTGTACTTCTTCACCAGCTCTACCACTaGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTT +
Preference number: 2 (lower is better)
Translates to: GQSNSISVLLHQLYH*GFLEWSDPAANYSL
Trigger: AAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTGAAGAAGTACAGAAATGCTGTTACTTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDAHTPV*WALAVV
Trigger: GACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGC...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
3UTR-3UTR TCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTATGTGGACTGAAATTTaGGCTGCAACATCTCCAAAA +
Preference number: 2 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCMWTEI*AATSPK
Trigger: TTTTGGAGATGTTGCAGCTCAAATTTCAGTCCACAT...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATGTGGACTGAAATTTaGGCTGCAACATCTCCAAAA +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSMWTEI*AATSPK
Trigger: TTTTGGAGATGTTGCAGCTCAAATTTCAGTCCACAT...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCGATTCATATGTGGACTaGAATTTGAGCTGCAACATC +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSDSYVD*NLSCNI
Trigger: GATGTTGCAGCTCAAATTTCAGTCCACATATGAATC...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 2 (lower is better)
Translates to: DVINESPVTGIQGYLHTDACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp ATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: ITEATVVKRITSQMHFWVVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...GACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCACCAGCCTATCCTGCTaGAAAGATGTTCAGTCTCCT +
Preference number: 2 (lower is better)
Translates to: LEWSDPAANYSLTHASKFTSLSC*KDVQSP
Trigger: AGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGT...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR GCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCATTACAGTCTTACACATaGAAGCAAGTTCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: LEALPSFEPSATGGSDHSLQSYT*KQVLGD
Trigger: ATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAA...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp ACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATATCCTGGCTAAGACTGCTTaGAATCCTTCCTGGCCGCTG +
Preference number: 2 (lower is better)
Translates to: TFGNKTTFHEQGEAFGDILAKTA*NPSWPL
Trigger: CAGCGGCCAGGAAGGATTGCAAGCAGTCTTAGCCAG...GATATCTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAAAAAATGTACTCAATCTaGCCCAGTTCCTCATTGAGC +
Preference number: 2 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKKMYSI*PSSSLS
Trigger: GCTCAATGAGGAACTGGGGCAGATTGAGTACATTTT...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
48% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGTCAAATCTCAAACTCTaGAGCCAGCAGAATTTCAGC +
Preference number: 2 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIASNLKL*SQQNFS
Trigger: GCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGA...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGAGTGACCCTCTGGCCTaGTTTTCCATAGCGCACACT +
Preference number: 2 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLESDPLA*FSIAHT
Trigger: AGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACT...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGCAGTCCACGCTGTTCTaGTCACTCACATCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: NATTGITEATVVKRITSQQSTLF*SLTSWS
Trigger: TGACCAGGATGTGAGTGACCAGAACAGCGTGGACTG...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCATGCATTACCAACAAATaGAAACTGGTTTGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPCITNK*KLVWED
Trigger: ATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCA...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGAGGCCTTCGGCTACTTaGAGGCCTTGCCTTCTTTTG +
Preference number: 2 (lower is better)
Translates to: NATTGITEATVVKRITSQRPSAT*RPCLLL
Trigger: CAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCT...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACTTCACTGTTTTATCCTaGCTAAAGCTGCTCACGGTG +
Preference number: 2 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHFTVLS*LKLLTV
Trigger: CACCGTGAGCAGCTTTAGCCAGGATAAAACAGTGAA...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCATATTGTTATGGTCTCTaGGGTCCGGGATTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPYCYGL*GPGFKN
Trigger: ATTTTTAAATCCCGGACCCCAGAGACCATAACAATA...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR CCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAAATTCTTCTATTGTTATaGTCTCTGGGGTCCGGGATT +
Preference number: 2 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKILLLL*SLGSGI
Trigger: AATCCCGGACCCCAGAGACCATAACAATAGAAGAAT...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR TCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: FRILSGEPLSHFISMSLHAHTPV*WALAVV
Trigger: GACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGC...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAATCAGAGTTTGTGCTTTaGCAGACAATCATCAACCAA +
Preference number: 2 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKSEFVL*QTIINQ
Trigger: TTGGTTGATGATTGTCTGTCAAAGCACAAACTCTGA...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR TCA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGACCCTGCAAGTCTGCTaGTATCTGCTCCAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: NATTGITEATVVKRITSQTLQVC*YLLQVL
Trigger: CAGAACTTGGAGCAGATATCAGCAGACTTGCAGGGT...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAGTTATTTCTGTCTTCTaGTCCAGGTCATCATGTACT +
Preference number: 2 (lower is better)
Translates to: PHLLPQISNSGASRISAPVISVF*SRSSCT
Trigger: AGTACATGATGACCTGGATCAGAAGACAGAAATAAC...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 2 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNEACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGTTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNELSEAI*LPHLLP
Trigger: AGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGAGTGACCCTCTGGCCTaGTTTTCCATAGCGCACACT +
Preference number: 2 (lower is better)
Translates to: IENQHLVKCRQACKGKTTSDPLA*FSIAHT
Trigger: AGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACT...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
3UTR-3UTR CCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTTTTAAAAGTATACCTTaGGAAAGGCTGATCTTACAG +
Preference number: 2 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQIFKSIP*ERLILQ
Trigger: CTGTAAGATCAGCCTTTCCCAAGGTATACTTTTAAA...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCATTTAAAAGTATACCTTaGGAAAGGCTGATCTTACAG +
Preference number: 2 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPFKSIP*ERLILQ
Trigger: CTGTAAGATCAGCCTTTCCCAAGGTATACTTTTAAA...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CCA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACCAGATTCAGCTGTCCTaGTTTGTAGAGCTGGGGACA +
Preference number: 2 (lower is better)
Translates to: DVINESPVTGIQGYLHTDQIQLS*FVELGT
Trigger: TGTCCCCAGCTCTACAAACCAGGACAGCTGAATCTG...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACCCAACAAATGGAAACTaGTTTGGGAAGATGCCAAAG +
Preference number: 2 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHPTNGN*FGKMPK
Trigger: CTTTGGCATCTTCCCAAACCAGTTTCCATTTGTTGG...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACCAGCTCCACCTGAAGTaGAAAGATAACTACGTGGTT +
Preference number: 2 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDQLHLK*KDNYVV
Trigger: AACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTG...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp ATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACAAATACATGCAACTCAGTCTaGAAGCAACACAGTACACGC +
Preference number: 2 (lower is better)
Translates to: ITSQMHFWVRECRALPTNTCNSV*KQHSTR
Trigger: GCGTGTACTGTGTTGCTTTCAGACTGAGTTGCATGT...ATTTGTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCCTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAG +
Preference number: 2 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISLSGVE*PCSKLQ
Trigger: CTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAG...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCAAAAGAGGAAAGTTCTaGATTGGTCCCCAGTTTGAC +
Preference number: 2 (lower is better)
Translates to: LEWSDPAANYSLTHASKFKRGKF*IGPQFD
Trigger: GTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTT...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TTCATCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCTTAAAGGAGAATGTATaGAAAACCAGGGCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: FIPLFCGSIRIFKHLMPLLKENV*KTRALV
Trigger: CACCAAGGCCCTGGTTTTTCATACATTCTCCTTTAA...GAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558458.1
3UTR-3UTR GCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTGTATCCAAGGCTATCTaGACACTGACCACAATGACC +
Preference number: 2 (lower is better)
Translates to: APFYPPEDPFSEYAALQVVSKAI*TLTTMT
Trigger: GGTCATTGTGGTCAGTGTGCAGATAGCCTTGGATAC...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCACACAGCATTATTCCCTaGTATCACAAACACATCATT +
Preference number: 2 (lower is better)
Translates to: PHLLPQISNSGASRISAPHSIIP*YHKHII
Trigger: AATGATGTGTTTGTGATAGCAGGGAATAATGCTGTG...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACAGTGACCCTCTGGCCTaGTTTTCCATAGCGCACACT +
Preference number: 2 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDSDPLA*FSIAHT
Trigger: AGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACT...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
3UTR-3UTR CCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCTTTAAAAGTATACCTTaGGAAAGGCTGATCTTACAG +
Preference number: 2 (lower is better)
Translates to: APPLASNLKLWSQQNFSSFKSIP*ERLILQ
Trigger: CTGTAAGATCAGCCTTTCCCAAGGTATACTTTTAAA...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CCA 90 bp ATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCCAGATTCAGCTGTCCTaGTTTGTAGAGCTGGGGACA +
Preference number: 2 (lower is better)
Translates to: ITEATVVKRITSQMHFWVQIQLS*FVELGT
Trigger: TGTCCCCAGCTCTACAAACCAGGACAGCTGAATCTG...GACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGCATCCCTCTCTTCTGTaGCAGCATTCGCATCTTCAA +
Preference number: 2 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEHPSLL*QHSHLQ
Trigger: TTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATG...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp TCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCTTTAGAAAAACCAGGGCCTTaGTGTTTGAGTAACGGCAAT +
Preference number: 2 (lower is better)
Translates to: SLSSVAAFASSSILCHSLEKPGP*CLSNGN
Trigger: ATTGCCGTTACTCAAACACCAAGGCCCTGGTTTTTC...TAAAGAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558458.1
3UTR-3UTR TCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTCAGCTCCACCTGAAGTaGAAAGATAACTACGTGGTT +
Preference number: 2 (lower is better)
Translates to: APFYPPEDPFSEYAALQVQLHLK*KDNYVV
Trigger: AACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTG...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp ATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACAAATCAGCTCCACCTGAAGTaGAAAGATAACTACGTGGTT +
Preference number: 2 (lower is better)
Translates to: ITSQMHFWVRECRALPTNQLHLK*KDNYVV
Trigger: AACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTG...ATTTGTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp AATGGAAACTGGTTTGGGAAGATGCCAAAGATGCCATTACTGTGCATTGTAAATTCACAAACCAGACAGTaGCCCTCTGGCCTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: NGNWFGKMPKMPLLCIVNSQTRQ*PSGLVF
Trigger: GAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGA...ATTTACAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGTCACAAACCAGACAGTaGCCCTCTGGCCTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLSQTRQ*PSGLVF
Trigger: GAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGA...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp TTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: LLRELQARCTSGSGNVVHALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...ATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGTGACCCTCTGGCCTaGTTTTCCATAGCGCACACT +
Preference number: 2 (lower is better)
Translates to: WERLILQIHVYLSIGMLFSDPLA*FSIAHT
Trigger: AGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACT...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATGGTCTCTGTATGCGATaGCCAAGGTCCGAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNGLCMR*PRSEGL
Trigger: AAGGCCTTCGGACCTTGGCCATCGCATACAGAGACC...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR TCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACAATTTCAGCTCCACCTaGAGTGAAAAGATAACTACG +
Preference number: 2 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDNFSST*SEKITT
Trigger: CGTAGTTATCTTTTCACTTCAGGTGGAGCTGAAATT...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp TTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATATGCCAACACCAATGTaGGCACTTTTAATCATGCTG +
Preference number: 2 (lower is better)
Translates to: LLRELQARCTSGSGNVVHMPTPM*ALLIML
Trigger: CAGCATGATTAAAAGTGCTCACATTGGTGTTGGCAT...ATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CAGAATAGTATCTGCTCCTTTGGAATAAAGCTTTATCTGTCCTTCTGGGTTTCGTGTCTTTTCCAGCCCTaGTGTTGGGGGTGGATTTTT +
Preference number: 2 (lower is better)
Translates to: QNSICSFGIKLYLSFWVSCLFQP*CWGWIF
Trigger: AAAAATCCACCCCCAACATCAGGGCTGGAAAAGACA...CGAAACCCAGAAGGACAGATAAAGCTTTATTCCAAAGGAGCAGATACTATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp ACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTAATTGGTCCCCAGTTTaGCTCTCCCAGATTGAATTT +
Preference number: 2 (lower is better)
Translates to: TVVKRITSQMHFWVRECRNWSPV*LSQIEF
Trigger: AAATTCAATCTGGGAGAGTCAAACTGGGGACCAATT...ACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CAGAATAGTATCTGCTCCTTTGGAATAAAGCTTTATCTGTCCTTCTGGGTTTCGTGCGCTATTCTCTTCTaGCATTACAGTGTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: QNSICSFGIKLYLSFWVSCAILF*HYSVAE
Trigger: CTCTGCCACACTGTAATGTCAGAAGAGAATAGCGCA...CGAAACCCAGAAGGACAGATAAAGCTTTATTCCAAAGGAGCAGATACTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATTTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNLSEAI*LPHLLP
Trigger: AGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
3UTR-3UTR CCA 90 bp TTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATAAATGGAAACTGGTTTaGGAAGATGCCAAAGATGCC +
Preference number: 2 (lower is better)
Translates to: LLRELQARCTSGSGNVVHKWKLV*EDAKDA
Trigger: GGCATCTTTGGCATCTTCCCAAACCAGTTTCCATTT...ATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp GAGAAACACAAGCACACTTTTGTATTCTTCAGGCTTGGAAGCCATTaGTTGTCCTGGCTGAACAGACAGGTAGATATCAAGACTAAAGAG +
Preference number: 2 (lower is better)
Translates to: EKHKHTFVFFRLGSH*LSWLNRQVDIKTKE
Trigger: CTCTTTAGTCTTGATATCTACCTGTCTGTTCAGCCAGGACAACAAATGGCTTCCAAGCCTGAAGAATACAAAAGTGTGCTTGTGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR CAA 90 bp TGCTTGCTGTCTTTCCAAGAAAGGATTCCCATGAATTTATCTAACTaGTTGTTAGGCACCTCACAGACAACAATCCCATCAAACCCTGCA +
Preference number: 2 (lower is better)
Translates to: CLLSFQERIPMNLSN*LLGTSQTTIPSNPA
Trigger: TGCAGGGTTTGATGGGATTGTTGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATTCATGGGAATCCTTTCTTGGAAAGACAGCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACCTGGGTTTCGAACTATaGCAGACATCCTTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDLGFEL*QTSFFW
Trigger: CCAGAAAAAGGATGTCTGTCATAGTTCGAAACCCAG...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR GCA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
3UTR-3UTR GCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATGCTACTTGGAGGCCTTaGCTTCTTTTGAGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNATWRP*LLLSLL
Trigger: CAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGC...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR CCA 90 bp ACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATATCTCAAATCTCAAACTCTaGAGCCAGCAGAATTTCAGC +
Preference number: 2 (lower is better)
Translates to: TFGNKTTFHEQGEAFGDISNLKL*SQQNFS
Trigger: GCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGA...GATATCTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp ACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATATCCAAATGAATAGTCGCTaGCTAAGACTGCTTGCAATC +
Preference number: 2 (lower is better)
Translates to: TFGNKTTFHEQGEAFGDIQMNSR*LRLLAI
Trigger: GATTGCAAGCAGTCTTAGCCAGCGACTATTCATTTG...GATATCTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGACAAGGAGAAGCCTTTaGAGATATCTAAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLETRRSL*RYLNCA
Trigger: TGCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGT...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp ACAATCATCAACCAACCACATGAGGTAGGTAGTATGTCCTCATTTTACAGAGGATTCACTGTTTTATCCTaGCTAAAGCTGCTCACGGTG +
Preference number: 2 (lower is better)
Translates to: TIINQPHEVGSMSSFYRGFTVLS*LKLLTV
Trigger: CACCGTGAGCAGCTTTAGCCAGGATAAAACAGTGAA...TCCTCTGTAAAATGAGGACATACTACCTACCTCATGTGGTTGGTTGATGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR CCA 90 bp ATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCGTAACTGATAGTGCATaGCGGACTTTTAGGTTCGTT +
Preference number: 2 (lower is better)
Translates to: ITEATVVKRITSQMHFWVVTDSA*RTFRFV
Trigger: AACGAACCTAAAAGTCCGCCATGCACTATCAGTTAC...GACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp TTGCTGTCTTTCCAAGAAAGGATTCCCATGAATTTATCTAACTTGTaGTTAGGCACCTCACAGACAACAATCCCATCAAACCCTGCAAGT +
Preference number: 2 (lower is better)
Translates to: LLSFQERIPMNLSNL*LGTSQTTIPSNPAS
Trigger: ACTTGCAGGGTTTGATGGGATTGTTGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATTCATGGGAATCCTTTCTTGGAAAGACAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp AGGATGCAGCCTCTCAGGATTATCTTCTCATTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGGATTCCCATGAATTTATCTAACTTG +
Preference number: 2 (lower is better)
Translates to: RMQPLRIIFSLLREC*LSFQERIPMNLSNL
Trigger: CAAGTTAGATAAATTCATGGGAATCCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAATGAGAAGATAATCCTGAGAGGCTGCATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGATGTGGACTGAAATTTaGGCTGCAACATCTCCAAAA +
Preference number: 2 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNEMWTEI*AATSPK
Trigger: TTTTGGAGATGTTGCAGCTCAAATTTCAGTCCACAT...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp TTGAGATCCTGTAGTGGTCTAGCATCTTATTTGACACATGGACAAACCAAAGACCTGTCACTGAAAGAATaGAGCAAAGTCTCAGTTCTC +
Preference number: 2 (lower is better)
Translates to: LRSCSGLASYLTHGQTKDLSLKE*SKVSVL
Trigger: GAGAACTGAGACTTTGCTTCATTCTTTCAGTGACAG...GTCTTTGGTTTGTCCATGTGTCAAATAAGATGCTAGACCACTACAGGATCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558024.1
3UTR-3UTR GCA 90 bp AATGGAAACTGGTTTGGGAAGATGCCAAAGATGCCATTACTGTGCATTGTAAATGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: NGNWFGKMPKMPLLCIVNALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...ATTTACAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp ATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACAAATTTACAGTCTTACACATaGAAGCAAGTTCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: ITSQMHFWVRECRALPTNLQSYT*KQVLGD
Trigger: ATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAA...ATTTGTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp AATGGAAACTGGTTTGGGAAGATGCCAAAGATGCCATTACTGTGCATTGTAAATAATCCCATCAAACCCTaGAAGTCTGCTGATATCTGC +
Preference number: 2 (lower is better)
Translates to: NGNWFGKMPKMPLLCIVNNPIKP*KSADIC
Trigger: GCAGATATCAGCAGACTTGCAGGGTTTGATGGGATT...ATTTACAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR GCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGAGCCACTGCAGGTATTaGTTTTCGAGAATAATACAT +
Preference number: 2 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLESHCRY*FSRIIH
Trigger: ATGTATTATTCTCGAAAAGCAATACCTGCAGTGGCT...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp TGCTTGCTGTCTTTCCAAGAAAGGATTCCCATGAATTTATCTAACTTGTTGTTATTGGGCTTTCTGGAGTaGAGTGACCCTGCAGCAAAT +
Preference number: 2 (lower is better)
Translates to: CLLSFQERIPMNLSNLLLLGFLE*SDPAAN
Trigger: ATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAA...TAACAACAAGTTAGATAAATTCATGGGAATCCTTTCTTGGAAAGACAGCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp CAGAATAGTATCTGCTCCTTTGGAATAAAGCTTTATCTGTCCTTCTGGGTTTCGAAATGGAAACTGGTTTaGGAAGATGCCAAAGATGCC +
Preference number: 2 (lower is better)
Translates to: QNSICSFGIKLYLSFWVSKWKLV*EDAKDA
Trigger: GGCATCTTTGGCATCTTCCCAAACCAGTTTCCATTT...CGAAACCCAGAAGGACAGATAAAGCTTTATTCCAAAGGAGCAGATACTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTGCATTACCAACAAATaGAAACTGGTTTGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: APFYPPEDPFSEYAALQVCITNK*KLVWED
Trigger: ATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp ATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCCTTTATCTGTCCTTCTaGGTTTCGAACTATGACAGA +
Preference number: 2 (lower is better)
Translates to: ITEATVVKRITSQMHFWVLYLSF*VSNYDR
Trigger: TCTGTCATAGTTCGAAACCCAGAAGGACAGATAAAG...GACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR CCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGTATCTTCTACAGCAGTaGCACCTAGTAGCATCAAAT +
Preference number: 2 (lower is better)
Translates to: IENQHLVKCRQACKGKTTYLLQQ*HLVASN
Trigger: ATTTGATGCTACTAGGTGCCACTGCTGTAGAAGATA...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR CAA 90 bp GATCAAATTACCAGCCTATCCTGCTGCAAAGATGTTCAGTCTCCTTaGTCCCTAGACTGGTATAAAAATGAGAAACACAAGCACACTTTT +
Preference number: 2 (lower is better)
Translates to: DQITSLSCCKDVQSP*SLDWYKNEKHKHTF
Trigger: AAAAGTGTGCTTGTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGTAATTTGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR CAA 90 bp TCAAACTCACTCAAGTGTCACCTGACTCTCTTGGGAAATGTAACTTaGTCTGACCAAGAATTTAATAGGGACCAGATTAAGGACTCTGTA +
Preference number: 2 (lower is better)
Translates to: SNSLKCHLTLLGNVT*SDQEFNRDQIKDSV
Trigger: TACAGAGTCCTTAATCTGGTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTTGAGTGAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
3UTR CAA 90 bp TTAGCTCATTATCCATCAAACTCACTCAAGTGTCACCTGACTCTCTaGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: LAHYPSNSLKCHLTL*GNVTLSDQEFNRDQ
Trigger: CTGGTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTTGAGTGAGTTTGATGGATAATGAGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
3UTR-3UTR TCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACAAGCATGTCCTTACATaGCACAGACTGAGAGCTTTT +
Preference number: 2 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHKHVLT*HRLRAF
Trigger: AAAAGCTCTCAGTCTGTGTCATGTAAGGACATGCTT...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR TCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGTTGACTCTCCCAGATTaGATTTCCTATTGCAAGAAT +
Preference number: 2 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNELTLPD*ISYCKN
Trigger: ATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAA...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR GCA 90 bp TATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCAGGCATAACCGATTTACAGTCTTACACATaGAAGCAAGTTCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: YHKHIIHVVSQHVAGITDLQSYT*KQVLGD
Trigger: ATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAA...ATCGGTTATGCCTGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp AATGGAAACTGGTTTGGGAAGATGCCAAAGATGCCATTACTGTGCATTGTAAATTCAAATCTCAAACTCTaGAGCCAGCAGAATTTCAGC +
Preference number: 2 (lower is better)
Translates to: NGNWFGKMPKMPLLCIVNSNLKL*SQQNFS
Trigger: GCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGA...ATTTACAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 90 bp AGATCAACACTTAATTATTCAGCTAACATTTACCAAATGCCCCTGTaGATGGAACATGGCACCAAGTGTTGGAGAACAGGCAAATCAATA +
Preference number: 2 (lower is better)
Translates to: RSTLNYSANIYQMPL*MEHGTKCWRTGKSI
Trigger: TATTGATTTGCCTGTTCTCCAACACTTGGTGCCATGTTCCATCAACAGGGGCATTTGGTAAATGTTAGCTGAATAATTAAGTGTTGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558024.1
3UTR CAA 90 bp CAAGCTCAGCAGTTTCAACATAACAGAGACCATGTGGCTCACTACTaGATAGGAGAAGTAAATCAGCAGCAACAAATTGGTTATTTTCTA +
Preference number: 2 (lower is better)
Translates to: QAQQFQHNRDHVAHY*IGEVNQQQQIGYFL
Trigger: TAGAAAATAACCAATTTGTTGCTGCTGATTTACTTCTCCTATCAAGTAGTGAGCCACATGGTCTCTGTTATGTTGAAACTGCTGAGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR TCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACGATTCATATGTGGACTaGAATTTGAGCTGCAACATC +
Preference number: 2 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHDSYVD*NLSCNI
Trigger: GATGTTGCAGCTCAAATTTCAGTCCACATATGAATC...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR GCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCTTTAGTGTCAGGACCTaGAAAAATAACCATTCCAAA +
Preference number: 2 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISFSVRT*KNNHSK
Trigger: TTTGGAATGGTTATTTTTGCAGGTCCTGACACTAAA...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGTTTAAAAGTATACCTTaGGAAAGGCTGATCTTACAG +
Preference number: 2 (lower is better)
Translates to: IENQHLVKCRQACKGKTTFKSIP*ERLILQ
Trigger: CTGTAAGATCAGCCTTTCCCAAGGTATACTTTTAAA...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
3UTR-3UTR CCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCTTTAAAAGTATACCTTaGGAAAGGCTGATCTTACAG +
Preference number: 2 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISFKSIP*ERLILQ
Trigger: CTGTAAGATCAGCCTTTCCCAAGGTATACTTTTAAA...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATCAAATGAATAGTCGCTaGCTAAGACTGCTTGCAATC +
Preference number: 2 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNQMNSR*LRLLAI
Trigger: GATTGCAAGCAGTCTTAGCCAGCGACTATTCATTTG...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR CCA 90 bp AATGGAAACTGGTTTGGGAAGATGCCAAAGATGCCATTACTGTGCATTGTAAATACAAGGAGAAGCCTTTaGAGATATCTAAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: NGNWFGKMPKMPLLCIVNTRRSL*RYLNCA
Trigger: TGCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGT...ATTTACAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCACAGACCTTCTTGAGCTaGACCTGCGGGTCCGAGGCC +
Preference number: 3 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPQTFLS*TCGSEA
Trigger: GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTG...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCCACCAGCTCTACCACTaGGGCTTTCTGGAGTGGAGT +
Preference number: 3 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEAHQLYH*GFLEWS
Trigger: ACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTG...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAACAGACCTTCTTGAGCTaGACCTGCGGGTCCGAGGCC +
Preference number: 3 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKQTFLS*TCGSEA
Trigger: GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTG...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR GCA 72 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTaGGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTG +
Preference number: 3 (lower is better)
Translates to: EQKHIQTFLSLT*GSEAFGYLEAL
Trigger: CAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGAGGCCTTCGGCTACTaGGAGGCCTTGCCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: LEALPSFEPSATGGSDHSEAFGY*EALPSF
Trigger: AAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTC...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR TCA 72 bp CCTCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTCTGCCGCAGATTTAAG +
Preference number: 3 (lower is better)
Translates to: PLAWFSIAHTPV*WALAVVCRRFK
Trigger: CTTAAATCTGCGGCAGACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp ATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCCCAGGGCCTTGGTGTTaGAGTAACGGCAATAAGTCA +
Preference number: 3 (lower is better)
Translates to: IQVSVCDGQGPKAFPCKFPGPWC*SNGNKS
Trigger: TGACTTATTGCCGTTACTCAAACACCAAGGCCCTGG...GAATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558458.1
3UTR-3UTR CAA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAGATGGGCACTGGCAGTaGTCTGCCGCAGATTTAAGT +
Preference number: 3 (lower is better)
Translates to: PHLLPQISNSGASRISAPDGHWQ*SAADLS
Trigger: ACTTAAATCTGCGGCAGACAACTGCCAGTGCCCATC...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGGATGGGCACTGGCAGTaGTCTGCCGCAGATTTAAGT +
Preference number: 3 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIADGHWQ*SAADLS
Trigger: ACTTAAATCTGCGGCAGACAACTGCCAGTGCCCATC...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGTTGTATTCTTCAGGCTaGGAAGCCATTTGTTGTCCT +
Preference number: 3 (lower is better)
Translates to: SATWRPCLLLSLLPPADLLYSSG*EAICCP
Trigger: AGGACAACAAATGGCTTCCAAGCCTGAAGAATACAA...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR CAA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGACTCTCCATAGCCTTCTaGGTGAGCAAAAGCATATCC +
Preference number: 3 (lower is better)
Translates to: AICLPHLLPQISNSGASRLSIAF*VSKSIS
Trigger: GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAG...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGTAACAGCGAGTGTTTaGTCCACCAAATCACAAACC +
Preference number: 3 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPVTASV*STKSQT
Trigger: GGTTTGTGATTTGGTGGACAAAACACTCGCTGTTAC...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCAGGATTATCTTCTCATaGTTGAGGGAATGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEARIIFS*LRECLL
Trigger: CAGCAAGCATTCCCTCAACAATGAGAAGATAATCCT...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR TCA 72 bp CGGAGAAAATGTACTCAATCTGCCCCAGTTCCTCATTaGGCGTGGTCGTTCGAGCCACTGCAGGTATTGCTT +
Preference number: 3 (lower is better)
Translates to: RRKCTQSAPVPH*AWSFEPLQVLL
Trigger: AAGCAATACCTGCAGTGGCTCGAACGACCACGCTCAATGAGGAACTGGGGCAGATTGAGTACATTTTCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTCATGTGGCTCACTACTaGATAGGAGAAGTAAATCAG +
Preference number: 3 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGHVAHY*IGEVNQ
Trigger: CTGATTTACTTCTCCTATCAAGTAGTGAGCCACATG...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATGAATTTATCTAACTaGTTGTTAGGCACCTCACAG +
Preference number: 3 (lower is better)
Translates to: SATWRPCLLLSLLPPADLMNLSN*LLGTSQ
Trigger: CTGTGAGGTGCCTAACAACAAGTTAGATAAATTCAT...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR TCA 72 bp TCACCAGCTCTACCACTTGGGCTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAGTCTTACACATGCAAG +
Preference number: 3 (lower is better)
Translates to: SPALPLGLSGVE*PCSKLQSYTCK
Trigger: CTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR TCA 72 bp CCGAAGGCCTTCCCCTGCAAATTCACTGAGGTGGTCTaGCGTCAAAGACAAAAGGACTTCATTGGAAGGATG +
Preference number: 3 (lower is better)
Translates to: PKAFPCKFTEVV*RQRQKDFIGRM
Trigger: CATCCTTCCAATGAAGTCCTTTTGTCTTTGACGTCAGACCACCTCAGTGAATTTGCAGGGGAAGGCCTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR GCA 72 bp CCCCAGTTCCTCATTGAGCGTGGTCGTTCGAGCCACTaGAGGTATTGCTTTTCGAGAATAATACATCTTCCG +
Preference number: 3 (lower is better)
Translates to: PQFLIERGRSSH*RYCFSRIIHLP
Trigger: CGGAAGATGTATTATTCTCGAAAAGCAATACCTGCAGTGGCTCGAACGACCACGCTCAATGAGGAACTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CCA 72 bp AGTTCTCTCCCAGTTCCCCATCTAGTGCCCTTACACTaGAGCTACCTTGATTCCACGCACAGAGTATGTTCT +
Preference number: 3 (lower is better)
Translates to: SSLPVPHLVPLH*SYLDSTHRVCS
Trigger: AGAACATACTCTGTGCGTGGAATCAAGGTAGCTCCAGTGTAAGGGCACTAGATGGGGAACTGGGAGAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558024.1
3UTR-3UTR CAA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAGTAACAGCGAGTGTTTaGTCCACCAAATCACAAACC +
Preference number: 3 (lower is better)
Translates to: PHLLPQISNSGASRISAPVTASV*STKSQT
Trigger: GGTTTGTGATTTGGTGGACAAAACACTCGCTGTTAC...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp GTAGTCAGCAATATGTTGCCCATCTTCTCCAGCCACGTTGTAAAAGGCCCCATAAGGCTTGGAAGCCATTaGTTGTCCTGGCTGAACAGA +
Preference number: 3 (lower is better)
Translates to: VVSNMLPIFSSHVVKGPIRLGSH*LSWLNR
Trigger: TCTGTTCAGCCAGGACAACAAATGGCTTCCAAGCCT...TATGGGGCCTTTTACAACGTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR CAA 90 bp ATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACAAATCACCAGCTCTACCACTaGGGCTTTCTGGAGTGGAGT +
Preference number: 3 (lower is better)
Translates to: ITSQMHFWVRECRALPTNHQLYH*GFLEWS
Trigger: ACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTG...ATTTGTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR GCA 72 bp GTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCTCAAATCTCAAACTCT +
Preference number: 3 (lower is better)
Translates to: VVCRRFKLSEAI*LPHLLPQISNS
Trigger: AGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR GCA 72 bp CTCATTGAGCGTGGTCGTTCGAGCCACTGCAGGTATTaGTTTTCGAGAATAATACATCTTCCGGTCCCAGTT +
Preference number: 3 (lower is better)
Translates to: LIERGRSSHCRY*FSRIIHLPVPV
Trigger: AACTGGGACCGGAAGATGTATTATTCTCGAAAAGCAATACCTGCAGTGGCTCGAACGACCACGCTCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CCA 72 bp CTGTACTTCTTCACCAGCTCTACCACTTGGGCTTTCTaGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTA +
Preference number: 3 (lower is better)
Translates to: LYFFTSSTTWAF*SGVTLQQITVL
Trigger: TAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTGAAGAAGTACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGGATGGGCACTGGCAGTaGTCTGCCGCAGATTTAAGT +
Preference number: 3 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKDGHWQ*SAADLS
Trigger: ACTTAAATCTGCGGCAGACAACTGCCAGTGCCCATC...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGGGCTACTTGGAGGCCTaGCCTTCTTTTGAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEGYLEA*PSFEPS
Trigger: AGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCC...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTAATTTATCTAACTTGTaGTTAGGCACCTCACAGACA +
Preference number: 3 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGNLSNL*LGTSQT
Trigger: TGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATT...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCGAGGAAAGTTCTGAATaGGTCCCCAGTTTGACTCTC +
Preference number: 3 (lower is better)
Translates to: LEWSDPAANYSLTHASKFEESSE*VPSLTL
Trigger: GAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTC...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACGTAGTCAGCAATATGTaGCCCATCTTCTCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: DVINESPVTGIQGYLHTDVVSNM*PIFSSH
Trigger: GTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGGTAGTCAGCAATATGTaGCCCATCTTCTCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: NATTGITEATVVKRITSQVVSNM*PIFSSH
Trigger: GTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAATTTATCTAACTTGTaGTTAGGCACCTCACAGACA +
Preference number: 3 (lower is better)
Translates to: APPLASNLKLWSQQNFSSNLSNL*LGTSQT
Trigger: TGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATT...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp CCCTGCTATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCAGGCATATTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGG +
Preference number: 3 (lower is better)
Translates to: PCYHKHIIHVVSQHVAGILLREC*LSFQER
Trigger: CCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAA...TATGCCTGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATAGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGGTGAGGGTACCCGTTTaGTCGGAGAAAATGTACTCA +
Preference number: 3 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEVRVPV*SEKMYS
Trigger: TGAGTACATTTTCTCCGACAAAACGGGTACCCTCAC...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR GCA 72 bp CTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATaGACTTCTGGGTCAGGGAATGTCGTGCATTACCAA +
Preference number: 3 (lower is better)
Translates to: LKPLLLRELQAR*TSGSGNVVHYQ
Trigger: TTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CCA 72 bp GTCAGGGAATGTCGTGCATTACCAACAAATGGAAACTaGTTTGGGAAGATGCCAAAGATGCCATTACTGTGC +
Preference number: 3 (lower is better)
Translates to: VRECRALPTNGN*FGKMPKMPLLC
Trigger: GCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCACGACATTCCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACTTGTATTCTTCAGGCTaGGAAGCCATTTGTTGTCCT +
Preference number: 3 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDLYSSG*EAICCP
Trigger: AGGACAACAAATGGCTTCCAAGCCTGAAGAATACAA...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACAACAAGGAGAAGCCTTaGGAGATATCTAAACTGTGC +
Preference number: 3 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDNKEKP*EISKLC
Trigger: GCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGTT...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR CAA 90 bp ACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTTTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGG +
Preference number: 3 (lower is better)
Translates to: TVVKRITSQMHFWVRECRLLREC*LSFQER
Trigger: CCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAA...ACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGTTCCCAATTCTTCTATaGTTATGGTCTCTGGGGTCC +
Preference number: 3 (lower is better)
Translates to: NATTGITEATVVKRITSQFPILL*LWSLGS
Trigger: GGACCCCAGAGACCATAACAATAGAAGAATTGGGAA...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR TCA 72 bp TCTTACACATGCAAGCAAGTTCTAGGAGATCATTCTTaGCATCACTTTCTAGGGCATGAGCCAAACTGTGGC +
Preference number: 3 (lower is better)
Translates to: SYTCKQVLGDHS*HHFLGHEPNCG
Trigger: GCCACAGTTTGGCTCATGCCCTAGAAAGTGATGTCAAGAATGATCTCCTAGAACTTGCTTGCATGTGTAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CCA 72 bp ATATCTGCTCCAAGTTCTGAAGTAACTGATAGTGCATaGCGGACTTTTAGGTTCGTTTCCCCATCAAGCTCA +
Preference number: 3 (lower is better)
Translates to: ISAPSSEVTDSA*RTFRFVSPSSS
Trigger: TGAGCTTGATGGGGAAACGAACCTAAAAGTCCGCCATGCACTATCAGTTACTTCAGAACTTGGAGCAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACAGGCTTGGAAGCCATTaGTTGTCCTGGCTGAACAGA +
Preference number: 3 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHRLGSH*LSWLNR
Trigger: TCTGTTCAGCCAGGACAACAAATGGCTTCCAAGCCT...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGAACAAGGAGAAGCCTTaGGAGATATCTAAACTGTGC +
Preference number: 3 (lower is better)
Translates to: NATTGITEATVVKRITSQNKEKP*EISKLC
Trigger: GCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGTT...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGCAAATGGAAACTGGTTaGGGAAGATGCCAAAGATGC +
Preference number: 3 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNEQMETG*GRCQRC
Trigger: GCATCTTTGGCATCTTCCCAAACCAGTTTCCATTTG...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTGAGCCACTGCAGGTATaGCTTTTCGAGAATAATACA +
Preference number: 3 (lower is better)
Translates to: APFYPPEDPFSEYAALQVEPLQV*LFENNT
Trigger: TGTATTATTCTCGAAAAGCAATACCTGCAGTGGCTC...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR TCA 72 bp TGGCTGAACAGACAGGTAGATATCAAGACTAAAGAGTaGCATGCAACTCAGTCTGAAAGCAACACAGTACAC +
Preference number: 3 (lower is better)
Translates to: WLNRQVDIKTKE*HATQSESNTVH
Trigger: GTGTACTGTGTTGCTTTCAGACTGAGTTGCATGTCACTCTTTAGTCTTGATATCTACCTGTCTGTTCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR CCA 72 bp ACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTaGGTCAGGGAATGTCGTGCATTACCAACAAATGGA +
Preference number: 3 (lower is better)
Translates to: TVVKRITSQMHF*VRECRALPTNG
Trigger: TCCATTTGTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACCTCTCCATAGCCTTCTaGGTGAGCAAAAGCATATCC +
Preference number: 3 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHLSIAF*VSKSIS
Trigger: GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAG...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR CCA 72 bp TTTGTATTCTTCAGGCTTGGAAGCCATTTGTTGTCCTaGCTGAACAGACAGGTAGATATCAAGACTAAAGAG +
Preference number: 3 (lower is better)
Translates to: FVFFRLGSHLLS*LNRQVDIKTKE
Trigger: CTCTTTAGTCTTGATATCTACCTGTCTGTTCAGCCAGGACAACAAATGGCTTCCAAGCCTGAAGAATACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACGATGTTCAGTCTCCTTaGTCCCTAGACTGGTATAAA +
Preference number: 3 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHDVQSP*SLDWYK
Trigger: TTTATACCAGTCTAGGGACAAAGGAGACTGAACATC...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp TATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCAGGCATAACCGATATGAATTTATCTAACTaGTTGTTAGGCACCTCACAG +
Preference number: 3 (lower is better)
Translates to: YHKHIIHVVSQHVAGITDMNLSN*LLGTSQ
Trigger: CTGTGAGGTGCCTAACAACAAGTTAGATAAATTCAT...ATCGGTTATGCCTGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR TCA 72 bp AAAGGAGAATGTATGAAAAACCAGGGCCTTGGTGTTTaGGTAACGGCAATAAGTCAGACACTTATGATTCCA +
Preference number: 3 (lower is better)
Translates to: KGECMKNQGLGV*VTAISQTLMIP
Trigger: TGGAATCATAAGTGTCTGACTTATTGCCGTTACTCAAACACCAAGGCCCTGGTTTTTCATACATTCTCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558458.1
3UTR GCA 72 bp TTGAATAAATTTGATCAAATTACCAGCCTATCCTGCTaGAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGG +
Preference number: 3 (lower is better)
Translates to: LNKFDQITSLSC*KDVQSPLSLDW
Trigger: CCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGTAATTTGATCAAATTTATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACAACACAAGCACACTTTaGTATTCTTCAGGCTTGGAA +
Preference number: 3 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHNTSTL*YSSGLE
Trigger: TTCCAAGCCTGAAGAATACAAAAGTGTGCTTGTGTT...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR TCA 72 bp AGTTCTGAATTGGTCCCCAGTTTGACTCTCCCAGATTaGATTTCCTATTGCAAGAATAATTCCCAAGCATAT +
Preference number: 3 (lower is better)
Translates to: SSELVPSLTLPD*ISYCKNNSQAY
Trigger: ATATGCTTGGGAATTATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAAACTGGGGACCAATTCAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CCA 72 bp AAATTCATATTGACTCACAGTTTCACTGTTTTATCCTaGCTAAAGCTGCTCACGGTGTCTGTGGTTTTCTTA +
Preference number: 3 (lower is better)
Translates to: KFILTHSFTVLS*LKLLTVSVVFL
Trigger: TAAGAAAACCACAGACACCGTGAGCAGCTTTAGCCAGGATAAAACAGTGAAACTGTGAGTCAATATGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR TCA 72 bp AAAGAACTGAAATTCTCTATCCGCTTGAGATTTGACTaGGAAATCCACAGGCTCTTTTTCCTGAGTTATTTC +
Preference number: 3 (lower is better)
Translates to: KELKFSIRLRFD*EIHRLFFLSYF
Trigger: GAAATAACTCAGGAAAAAGAGCCTGTGGATTTCTCAGTCAAATCTCAAGCGGATAGAGAATTTCAGTTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR TCA 72 bp TCTGACGTCAAAGACAAAAGGACTTCATTGGAAGGATaGAGTTTTTCAAACAGAATAGTATCTGCTCCTTTG +
Preference number: 3 (lower is better)
Translates to: SDVKDKRTSLEG*SFSNRIVSAPL
Trigger: CAAAGGAGCAGATACTATTCTGTTTGAAAAACTTCATCCTTCCAATGAAGTCCTTTTGTCTTTGACGTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR GCA 72 bp ATTGGAAGGATGAAGTTTTTCAAACAGAATAGTATCTaGTCCTTTGGAATAAAGCTTTATCTGTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: IGRMKFFKQNSI*SFGIKLYLSFW
Trigger: CCAGAAGGACAGATAAAGCTTTATTCCAAAGGAGCAGATACTATTCTGTTTGAAAAACTTCATCCTTCCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CAA 72 bp ACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTaGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: TCGSEAFGYLEA*PSFEPSATGGS
Trigger: AGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CCTTCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATGGCCTTGCCTTCTTTTaGGCCTTCTGCCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: PSATWRPCLLLSLLPPADGLAFF*AFCHRR
Trigger: CCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCC...ATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 72 bp TTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTaGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LSLTCGSEAFGY*EALPSFEPSAT
Trigger: GGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGCCCCAGTTCCTCATTaGGCGTGGTCGTTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFAPVPH*AWSFEP
Trigger: TGGCTCGAACGACCACGCTCAATGAGGAACTGGGGC...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp CTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCGGTCGTTCGAGCCACTaGAGGTATTGCTTTTCGAGA +
Preference number: 4 (lower is better)
Translates to: LELDLRVRGLRLLGGLAFGRSSH*RYCFSR
Trigger: TCTCGAAAAGCAATACCTGCAGTGGCTCGAACGACC...GAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTCCAGGTCTCAACAGGTaGCCTACCTGCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGPGLNR*PTCSPS
Trigger: ACTGGGGCTGCAGGTAGGCCACCTGTTGAGACCTGG...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR TCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCCATGCTGGCCTCACTaGGGTGGTCTGACGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQIPCWPH*GGLTSK
Trigger: CTTTGACGTCAGACCACCTCAGTGAGGCCAGCATGG...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558458.1
CDS-3UTR CCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGAGTGACCCTCTGGCCTaGTTTTCCATAGCGCACACT +
Preference number: 4 (lower is better)
Translates to: SATWRPCLLLSLLPPADLSDPLA*FSIAHT
Trigger: AGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACT...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CCTTCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATAGTGACCCTCTGGCCTaGTTTTCCATAGCGCACACT +
Preference number: 4 (lower is better)
Translates to: PSATWRPCLLLSLLPPADSDPLA*FSIAHT
Trigger: AGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACT...ATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGGCCTTGCCTTCTTTTaGGCCTTCTGCCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGGLAFF*AFCHRR
Trigger: CCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCC...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCAHTPV*WALAVV
Trigger: GACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGC...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCAATCCCATCAAACCCTaGAAGTCTGCTGATATCTGC +
Preference number: 4 (lower is better)
Translates to: LELDLRVRGLRLLGGLAFNPIKP*KSADIC
Trigger: GCAGATATCAGCAGACTTGCAGGGTTTGATGGGATT...GAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp GAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACTACCTGCAGCCCCAGTaGTGGCCCCCTGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ENYKPDALLGQGMSCITNYLQPQ*WPPEEQ
Trigger: CTGCTCCTCAGGGGGCCAGCACTGGGGCTGCAGGTA...GTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR CCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGACCAGGTCTCAACAGGTaGCCTACCTCAACCCAGACT +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRPGLNR*PTSTQT
Trigger: AGTCTGGGTTGAGGTAGGCCACCTGTTGAGACCTGG...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
CDS-3UTR CCA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTGGTCTCTGTATGCGATaGCCAAGGTCCGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGGLCMR*PRSEGL
Trigger: AAGGCCTTCGGACCTTGGCCATCGCATACAGAGACC...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCACCACTTGGGCTTTCTaGAGTGGAGTGACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFTTWAF*SGVTLQ
Trigger: CTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 72 bp CTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTaGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: LGEQKHIQTFLS*TCGSEAFGYLE
Trigger: CTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
3UTR CAA 72 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTaGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: SLLGEQKHIQTF*SLTCGSEAFGY
Trigger: GTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCACCCCTGCAAATTCACTaGGGTGGTCTGACGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPPLQIH*GGLTSK
Trigger: CTTTGACGTCAGACCACCTCAGTGAATTTGCAGGGG...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGGCCTTGCCTTCTTTTaGGCCTTCTGCCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: WAFWSGVTLQQITVLHMQGLAFF*AFCHRR
Trigger: CCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCC...TTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIAAHTPV*WALAVV
Trigger: GACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGC...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGACATGCAACTCAGTCTaGAAGCAACACAGTACACGC +
Preference number: 4 (lower is better)
Translates to: SATWRPCLLLSLLPPADLTCNSV*KQHSTR
Trigger: GCGTGTACTGTGTTGCTTTCAGACTGAGTTGCATGT...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCCCAGGGCCTTGGTGTTTaGGTAACGGCAATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: SRSLYAMAKVRRPSPANSQGLGV*VTAISQ
Trigger: CTGACTTATTGCCGTTACTCAAACACCAAGGCCCTG...GGAATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558458.1
CDS-3UTR GCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACCCGAAGGCCTTCCCCTaGAAATTCACTGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHPKAFP*KFTEVV
Trigger: GACCACCTCAGTGAATTTGCAGGGGAAGGCCTTCGG...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTATCCAGGTCTCTGTATaGGATGGCCAAGGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQIIQVSV*DGQGPK
Trigger: CTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558458.1
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTCTGGCTAAGACTGCTTaGAATCCTTCCTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCLAKTA*NPSWPL
Trigger: CAGCGGCCAGGAAGGATTGCAAGCAGTCTTAGCCAG...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCACAGTCCACGCTGTTCTaGTCACTCACATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LEALPSFEPSATGGSDHSQSTLF*SLTSWS
Trigger: TGACCAGGATGTGAGTGACCAGAACAGCGTGGACTG...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCAAATGGAAACTGGTTTaGGAAGATGCCAAAGATGCC +
Preference number: 4 (lower is better)
Translates to: LELDLRVRGLRLLGGLAFKWKLV*EDAKDA
Trigger: GGCATCTTTGGCATCTTCCCAAACCAGTTTCCATTT...GAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAAGGCCTTCGGCTACTTaGAGGCCTTGCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPRPSAT*RPCLLL
Trigger: CAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCT...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CTGGTTTGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTAGGCCTTCGGCTACTTaGAGGCCTTGCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LVCRAGDSPRCSGHSHPGRPSAT*RPCLLL
Trigger: CAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCT...ACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTCTGTTTGATGGGCACTaGCAGTTGTCTGCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGLFDGH*QLSAAD
Trigger: ATCTGCGGCAGACAACTGCCAGTGCCCATCAAACAG...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTAGTGACCCTCTGGCCTaGTTTTCCATAGCGCACACT +
Preference number: 4 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQISDPLA*FSIAHT
Trigger: AGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACT...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGTATCCGCTTGAGATTTaGCTGAGAAATCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SATWRPCLLLSLLPPADLYPLEI*LRNPQA
Trigger: AGCCTGTGGATTTCTCAGTCAAATCTCAAGCGGATA...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCCTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAG +
Preference number: 4 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFLSGVE*PCSKLQ
Trigger: CTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAG...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGACTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAG +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRLSGVE*PCSKLQ
Trigger: CTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAG...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCTTTAGGCCTTGCCTTCTTTTaGGCCTTCTGCCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: SLSSVAAFASSSILCHSLGLAFF*AFCHRR
Trigger: CCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCC...TAAAGAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHAHTPV*WALAVV
Trigger: GACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGC...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCTCACAAACCAGACAGTaGCCCTCTGGCCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: APPLASNLKLWSQQNFSSSQTRQ*PSGLVF
Trigger: GAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGA...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGAATCCCATCAAACCCTaGAAGTCTGCTGATATCTGC +
Preference number: 4 (lower is better)
Translates to: SATWRPCLLLSLLPPADLNPIKP*KSADIC
Trigger: GCAGATATCAGCAGACTTGCAGGGTTTGATGGGATT...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATCCAGGTCTCTGTATaGGATGGCCAAGGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: APPLASNLKLWSQQNFSSIQVSV*DGQGPK
Trigger: CTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAACTGGCTAAGACTGCTTaGAATCCTTCCTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKLAKTA*NPSWPL
Trigger: CAGCGGCCAGGAAGGATTGCAAGCAGTCTTAGCCAG...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CCTTCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATTTCCAAAACACCAGCTaGTATTTCTCAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: PSATWRPCLLLSLLPPADFQNTS*YFSGCS
Trigger: GCTGCATCCTGAGAAATACCAGCTGGTGTTTTGGAA...ATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGGGTCTCTGTATGCGATaGCCAAGGTCCGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGGLCMR*PRSEGL
Trigger: AAGGCCTTCGGACCTTGGCCATCGCATACAGAGACC...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CTGGTTTGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTTTGGGCTTTCTGGAGTaGAGTGACCCTGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LVCRAGDSPRCSGHSHPGLGFLE*SDPAAN
Trigger: ATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAA...ACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCACAGATTCAGCTGTCCTaGTTTGTAGAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: LEALPSFEPSATGGSDHSQIQLS*FVELGT
Trigger: TGTCCCCAGCTCTACAAACCAGGACAGCTGAATCTG...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGACAGATTCAGCTGTCCTaGTTTGTAGAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRQIQLS*FVELGT
Trigger: TGTCCCCAGCTCTACAAACCAGGACAGCTGAATCTG...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCTGGCCTCACTGAGGTaGTCTGACGTCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQILASLR*SDVKDK
Trigger: TTTGTCTTTGACGTCAGACCACCTCAGTGAGGCCAG...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558458.1
CDS-3UTR TCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCTGCGCTATTCTCTTCTaGCATTACAGTGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFCAILF*HYSVAE
Trigger: CTCTGCCACACTGTAATGTCAGAAGAGAATAGCGCA...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCTTCACTGAGGTGGTCTaGCGTCAAAGACAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFFTEVV*RQRQKD
Trigger: GTCCTTTTGTCTTTGACGTCAGACCACCTCAGTGAA...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCATGTCTTTTCCAGCCCTaGTGTTGGGGGTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPCLFQP*CWGWIF
Trigger: AAAAATCCACCCCCAACATCAGGGCTGGAAAAGACA...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGGATGGGCGATCCAGATaGAGCAGAGTAATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIADGRSR*SRVISA
Trigger: GGCTGAGATTACTCTGCTTCATCTGGATCGCCCATC...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR GCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGTATCCAAGGCTATCTaGACACTGACCACAATGACC +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPVSKAI*TLTTMT
Trigger: GGTCATTGTGGTCAGTGTGCAGATAGCCTTGGATAC...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACGCTACTTGGAGGCCTTaGCTTCTTTTGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHATWRP*LLLSLL
Trigger: CAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGC...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPLSEAI*LPHLLP
Trigger: AGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCAACAGGTGGCCTACCTaGAGCCCCAGTGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISNRWPT*SPSAGP
Trigger: GGGGCCAGCACTGGGGCTGCAGGTAGGCCACCTGTT...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR CCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGGTCTCTGTATGCGATaGCCAAGGTCCGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGGLCMR*PRSEGL
Trigger: AAGGCCTTCGGACCTTGGCCATCGCATACAGAGACC...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCATCCCTCTCTTCTGTaGCAGCATTCGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQIHPSLL*QHSHLQ
Trigger: TTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATG...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558458.1
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CTGGTTTGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCATCCCTCTCTTCTGTaGCAGCATTCGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: LVCRAGDSPRCSGHSHPGHPSLL*QHSHLQ
Trigger: TTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATG...ACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGACCAGCTCTACCACTTaGGCTTTCTGGAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIATSSTT*AFWSGV
Trigger: CACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGT...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CCTTCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATAAATGGAAACTGGTTTaGGAAGATGCCAAAGATGCC +
Preference number: 4 (lower is better)
Translates to: PSATWRPCLLLSLLPPADKWKLV*EDAKDA
Trigger: GGCATCTTTGGCATCTTCCCAAACCAGTTTCCATTT...ATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGCTGTTTGATGGGCACTaGCAGTTGTCTGCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIALFDGH*QLSAAD
Trigger: ATCTGCGGCAGACAACTGCCAGTGCCCATCAAACAG...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAACCCTGCAAGTCTGCTaGTATCTGCTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPTLQVC*YLLQVL
Trigger: CAGAACTTGGAGCAGATATCAGCAGACTTGCAGGGT...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCAAAAGAGGAAAGTTCTaGATTGGTCCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEAKRGKF*IGPQFD
Trigger: GTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTT...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTTGCGCTATTCTCTTCTaGCATTACAGTGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCCAILF*HYSVAE
Trigger: CTCTGCCACACTGTAATGTCAGAAGAGAATAGCGCA...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACAGCCCCTTCATCAGGTaGCTGAACTTGGTAAATCAG +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHSPFIR*LNLVNQ
Trigger: CTGATTTACCAAGTTCAGTCACCTGATGAAGGGGCT...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCACTGGGTTTCGAACTATaGCAGACATCCTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPLGFEL*QTSFFW
Trigger: CCAGAAAAAGGATGTCTGTCATAGTTCGAAACCCAG...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCTGGGTTTCGAACTATaGCAGACATCCTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQILGFEL*QTSFFW
Trigger: CCAGAAAAAGGATGTCTGTCATAGTTCGAAACCCAG...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558458.1
ENST00000559726.5
CDS-3UTR TCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGAACTGTGGCCATTTATaGTTAAGGCATAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: SATWRPCLLLSLLPPADLNCGHL*LRHNLL
Trigger: CAGGAGATTATGCCTTAATCATAAATGGCCACAGTT...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAATCCAGGTCTCTGTATaGGATGGCCAAGGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGIQVSV*DGQGPK
Trigger: CTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAAGCTACTTGGAGGCCTTaGCTTCTTTTGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKATWRP*LLLSLL
Trigger: CAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGC...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGTTCTTGAGCTTGACCTaGGGGTCCGAGGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEFLSLT*GSEAFG
Trigger: GCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAA...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACTTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHLSEAI*LPHLLP
Trigger: AGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGTTGGGCTTTCTGGAGTaGAGTGACCCTGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIALGFLE*SDPAAN
Trigger: ATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAA...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTTGGGCTTTCTGGAGTaGAGTGACCCTGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGLGFLE*SDPAAN
Trigger: ATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAA...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCGCTTGCAATCCTTCCTaGCCGCTGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: LEWSDPAANYSLTHASKFACNPS*PLMPTP
Trigger: TGGTGTTGGCATCAGCGGCCAGGAAGGATTGCAAGC...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGATTCACTGTTTTATCCTaGCTAAAGCTGCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRFTVLS*LKLLTV
Trigger: CACCGTGAGCAGCTTTAGCCAGGATAAAACAGTGAA...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTTTCACTGTTTTATCCTaGCTAAAGCTGCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGFTVLS*LKLLTV
Trigger: CACCGTGAGCAGCTTTAGCCAGGATAAAACAGTGAA...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTCCAGGTCTCAACAGGTaGCCTACAGAAATGCATTCT +
Preference number: 4 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCPGLNR*PTEMHS
Trigger: AGAATGCATTTCTGTAGGCCACCTGTTGAGACCTGG...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559829.5
CDS-3UTR CCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAATGAGACCCCAGAGATaGGCGATCCAGATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGMRPQR*AIQMKQ
Trigger: CTGCTTCATCTGGATCGCCCATCTCTGGGGTCTCAT...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559726.5
3UTR CAA 72 bp TCGGAGAAAATGTACTCAATCTGCCCCAGTTCCTCATaGAGCGTGGTCGTTCGAGCCACTGCAGGTATTGCT +
Preference number: 4 (lower is better)
Translates to: SEKMYSICPSSS*SVVVRATAGIA
Trigger: AGCAATACCTGCAGTGGCTCGAACGACCACGCTCAATGAGGAACTGGGGCAGATTGAGTACATTTTCTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACCAGGTATCCATTCCGTaGCCATGCCAAGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHQVSIP*PCQGEK
Trigger: CTTTTCTCCTTGGCATGGTCACGGAATGGATACCTG...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558906.5
CDS-3UTR TCA 90 bp CAGCAGTTTCAACATAACAGAGACCATGTGGCTCACTACTTGATAGGAGAAGTAGCCCCAGTTCCTCATTaGGCGTGGTCGTTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: QQFQHNRDHVAHYLIGEVAPVPH*AWSFEP
Trigger: TGGCTCGAACGACCACGCTCAATGAGGAACTGGGGC...TACTTCTCCTATCAAGTAGTGAGCCACATGGTCTCTGTTATGTTGAAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCCGCTTGAGATTTGACTaGGAAATCCACAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: APPLASNLKLWSQQNFSSRLRFD*EIHRLF
Trigger: AAAGAGCCTGTGGATTTCTCAGTCAAATCTCAAGCG...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATTCACTGAGGTGGTCTaGCGTCAAAGACAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPFTEVV*RQRQKD
Trigger: GTCCTTTTGTCTTTGACGTCAGACCACCTCAGTGAA...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTCTAGGAGATCATTCTTaGCATCACTTTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGLGDHS*HHFLGH
Trigger: ATGCCCTAGAAAGTGATGTCAAGAATGATCTCCTAG...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCACTAGGAGATCATTCTTaGCATCACTTTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPLGDHS*HHFLGH
Trigger: ATGCCCTAGAAAGTGATGTCAAGAATGATCTCCTAG...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGTGTCTTTTCCAGCCCTaGTGTTGGGGGTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIACLFQP*CWGWIF
Trigger: AAAAATCCACCCCCAACATCAGGGCTGGAAAAGACA...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTGTCTTTTCCAGCCCTaGTGTTGGGGGTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGCLFQP*CWGWIF
Trigger: AAAAATCCACCCCCAACATCAGGGCTGGAAAAGACA...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTCAGCTCCACCTGAAGTaGAAAGATAACTACGTGGTT +
Preference number: 4 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCQLHLK*KDNYVV
Trigger: AACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTG...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGACATGCAACTCAGTCTaGAAGCAACACAGTACACGC +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIATCNSV*KQHSTR
Trigger: GCGTGTACTGTGTTGCTTTCAGACTGAGTTGCATGT...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGCCAGTGCTGGCCCCCTaGGGAGCAGGTAGGATTGGG +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLPVLAP*GAGRIG
Trigger: CCCAATCCTACCTGCTCCTCAGGGGGCCAGCACTGG...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR TCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTTTAAAGGAGAATGTATaGAAAACCAGGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQILKENV*KTRALV
Trigger: CACCAAGGCCCTGGTTTTTCATACATTCTCCTTTAA...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558458.1
CDS-3UTR GCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAATCCCATCAAACCCTaGAAGTCTGCTGATATCTGC +
Preference number: 4 (lower is better)
Translates to: APPLASNLKLWSQQNFSSNPIKP*KSADIC
Trigger: GCAGATATCAGCAGACTTGCAGGGTTTGATGGGATT...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCAAAATGTACTCAATCTaGCCCAGTTCCTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFKMYSI*PSSSLS
Trigger: GCTCAATGAGGAACTGGGGCAGATTGAGTACATTTT...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAAAAATGTACTCAATCTaGCCCAGTTCCTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: LEALPSFEPSATGGSDHSKMYSI*PSSSLS
Trigger: GCTCAATGAGGAACTGGGGCAGATTGAGTACATTTT...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAGTATCCAAGGCTATCTaGACACTGACCACAATGACC +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPVSKAI*TLTTMT
Trigger: GGTCATTGTGGTCAGTGTGCAGATAGCCTTGGATAC...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAACTGGTTTGGGAAGATaGCAAAGATGCCATTACTGT +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPTGLGR*QRCHYC
Trigger: ACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGT...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGTCAGGGAATGTCGTaGATTACCAACAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFGQGMS*ITNKWK
Trigger: TTTCCATTTGTTGGTAATGCACGACATTCCCTGACC...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGGTCAGGGAATGTCGTaGATTACCAACAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPGQGMS*ITNKWK
Trigger: TTTCCATTTGTTGGTAATGCACGACATTCCCTGACC...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCTACTTGGAGGCCTTaGCTTCTTTTGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGATWRP*LLLSLL
Trigger: CAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGC...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGTTCTTGAGCTTGACCTaGGGGTCCGAGGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTFLSLT*GSEAFG
Trigger: GCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAA...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR GCA 90 bp TATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCAGGCATAACCGATTTCTTGAGCTTGACCTaGGGGTCCGAGGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: YHKHIIHVVSQHVAGITDFLSLT*GSEAFG
Trigger: GCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAA...ATCGGTTATGCCTGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCCTTCCTTTCCTAGTCTaGTCTTGCTGGTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: APPLASNLKLWSQQNFSSLPFLV*SCWSLS
Trigger: AGAAAGAGACCAGCAAGAGCAGACTAGGAAAGGAAG...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559829.5
CDS-3UTR CCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGTAACTGATAGTGCATaGCGGACTTTTAGGTTCGTT +
Preference number: 4 (lower is better)
Translates to: LEALPSFEPSATGGSDHSVTDSA*RTFRFV
Trigger: AACGAACCTAAAAGTCCGCCATGCACTATCAGTTAC...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAGTAACTGATAGTGCATaGCGGACTTTTAGGTTCGTT +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRVTDSA*RTFRFV
Trigger: AACGAACCTAAAAGTCCGCCATGCACTATCAGTTAC...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCTTCCAAAACACCAGCTaGTATTTCTCAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: APPLASNLKLWSQQNFSSFQNTS*YFSGCS
Trigger: GCTGCATCCTGAGAAATACCAGCTGGTGTTTTGGAA...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCATTCTTCTATTGTTATaGTCTCTGGGGTCCGGGATT +
Preference number: 4 (lower is better)
Translates to: IQVSVCDGQGPKAFPCKFILLLL*SLGSGI
Trigger: AATCCCGGACCCCAGAGACCATAACAATAGAAGAAT...GAATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558458.1
ENST00000559726.5
CDS-3UTR CCA 90 bp TCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCCCTTTATCTGTCCTTCTaGGTTTCGAACTATGACAGA +
Preference number: 4 (lower is better)
Translates to: SRSLYAMAKVRRPSPANSLYLSF*VSNYDR
Trigger: TCTGTCATAGTTCGAAACCCAGAAGGACAGATAAAG...GGAATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558458.1
CDS-3UTR CCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGCAAATTCACTGAGGTaGTCTGACGTCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: LEALPSFEPSATGGSDHSANSLR*SDVKDK
Trigger: TTTGTCTTTGACGTCAGACCACCTCAGTGAATTTGC...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCTTTAGGTCTCTGTATGCGATaGCCAAGGTCCGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLSSVAAFASSSILCHSLGLCMR*PRSEGL
Trigger: AAGGCCTTCGGACCTTGGCCATCGCATACAGAGACC...TAAAGAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558458.1
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGCATCCCTCTCTTCTGTaGCAGCATTCGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIAHPSLL*QHSHLQ
Trigger: TTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATG...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACACCACTTGGGCTTTCTaGAGTGGAGTGACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDTTWAF*SGVTLQ
Trigger: CTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACACCAGCTCTACCACTTaGGCTTTCTGGAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ENYKPDALLGQGMSCITNTSSTT*AFWSGV
Trigger: CACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGT...GTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACGCTTGCAATCCTTCCTaGCCGCTGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDACNPS*PLMPTP
Trigger: TGGTGTTGGCATCAGCGGCCAGGAAGGATTGCAAGC...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGACAAATGAATAGTCGCTaGCTAAGACTGCTTGCAATC +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRQMNSR*LRLLAI
Trigger: GATTGCAAGCAGTCTTAGCCAGCGACTATTCATTTG...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGTGCATTACCAACAAATaGAAACTGGTTTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SATWRPCLLLSLLPPADLCITNK*KLVWED
Trigger: ATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCA...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GTAGTCAGCAATATGTTGCCCATCTTCTCCAGCCACGTTGTAAAAGGCCCCATAAGGCCTTCGGCTACTTaGAGGCCTTGCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: VVSNMLPIFSSHVVKGPIRPSAT*RPCLLL
Trigger: CAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCT...TATGGGGCCTTTTACAACGTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTTCAAATCTCAAACTCTaGAGCCAGCAGAATTTCAGC +
Preference number: 4 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQISNLKL*SQQNFS
Trigger: GCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGA...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCACCCTGCAAGTCTGCTaGTATCTGCTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LEWSDPAANYSLTHASKFTLQVC*YLLQVL
Trigger: CAGAACTTGGAGCAGATATCAGCAGACTTGCAGGGT...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAGTTATTTCTGTCTTCTaGTCCAGGTCATCATGTACT +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRVISVF*SRSSCT
Trigger: AGTACATGATGACCTGGATCAGAAGACAGAAATAAC...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGATTCACTGAGGTGGTCTaGCGTCAAAGACAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGFTEVV*RQRQKD
Trigger: GTCCTTTTGTCTTTGACGTCAGACCACCTCAGTGAA...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACTTCACTGAGGTGGTCTaGCGTCAAAGACAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHFTEVV*RQRQKD
Trigger: GTCCTTTTGTCTTTGACGTCAGACCACCTCAGTGAA...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCATTTGTTTTGCTTTCCTaGGTTCTTCTCTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: LEALPSFEPSATGGSDHSFVLLS*VLLSLP
Trigger: TGGAAGTGAGAGAAGAACTCAGGAAAGCAAAACAAA...TGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CTGGTTTGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTTTTGTTTTGCTTTCCTaGGTTCTTCTCTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: LVCRAGDSPRCSGHSHPGFVLLS*VLLSLP
Trigger: TGGAAGTGAGAGAAGAACTCAGGAAAGCAAAACAAA...ACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACATGCCAACACCAATGTaGGCACTTTTAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHMPTPM*ALLIML
Trigger: CAGCATGATTAAAAGTGCTCACATTGGTGTTGGCAT...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCGGCCTTGCCTTCTTTTaGGCCTTCTGCCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFGLAFF*AFCHRR
Trigger: CCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCC...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCACAGCTCCACCTGAAGTaGAAAGATAACTACGTGGTT +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPQLHLK*KDNYVV
Trigger: AACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTG...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAAATTTCAGCTCCACCTaGAGTGAAAAGATAACTACG +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPNFSST*SEKITT
Trigger: CGTAGTTATCTTTTCACTTCAGGTGGAGCTGAAATT...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTCATCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCCTCACTGAGGTGGTCTaGCGTCAAAGACAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: FIPLFCGSIRIFKHLMPLLTEVV*RQRQKD
Trigger: GTCCTTTTGTCTTTGACGTCAGACCACCTCAGTGAG...GAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558458.1
CDS-3UTR GCA 90 bp GTAGTCAGCAATATGTTGCCCATCTTCTCCAGCCACGTTGTAAAAGGCCCCATAGGTCGTTCGAGCCACTaGAGGTATTGCTTTTCGAGA +
Preference number: 4 (lower is better)
Translates to: VVSNMLPIFSSHVVKGPIGRSSH*RYCFSR
Trigger: TCTCGAAAAGCAATACCTGCAGTGGCTCGAACGACC...TATGGGGCCTTTTACAACGTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTAAAATGTACTCAATCTaGCCCAGTTCCTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCKMYSI*PSSSLS
Trigger: GCTCAATGAGGAACTGGGGCAGATTGAGTACATTTT...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCGCTACTTGGAGGCCTTaGCTTCTTTTGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LEWSDPAANYSLTHASKFATWRP*LLLSLL
Trigger: CAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGC...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: DVINESPVTGIQGYLHTDVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp CCCTGCTATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCAGGCATATTAAGTGAGGCAATCTaGCTGCCCCACCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PCYHKHIIHVVSQHVAGILSEAI*LPHLLP
Trigger: AGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA...TATGCCTGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATAGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAACCAGCCTATCCTGCTaGAAAGATGTTCAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGTSLSC*KDVQSP
Trigger: AGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGT...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTGGTCTCTGTATGCGATaGCCAAGGTCCGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVGLCMR*PRSEGL
Trigger: AAGGCCTTCGGACCTTGGCCATCGCATACAGAGACC...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGATATCTTCTACAGCAGTaGCACCTAGTAGCATCAAAT +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRYLLQQ*HLVASN
Trigger: ATTTGATGCTACTAGGTGCCACTGCTGTAGAAGATA...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCTTGCAATCCTTCCTaGCCGCTGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: TVVKRITSQMHFWVRECRACNPS*PLMPTP
Trigger: TGGTGTTGGCATCAGCGGCCAGGAAGGATTGCAAGC...ACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAACAAGGAGAAGCCTTTaGAGATATCTAAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRTRRSL*RYLNCA
Trigger: TGCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGT...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR CAA 72 bp AACAGCATTTCTGTACTTCTTCACCAGCTCTACCACTaGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: NSISVLLHQLYH*GFLEWSDPAAN
Trigger: ATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTGAAGAAGTACAGAAATGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACACCCTGCAAGTCTGCTaGTATCTGCTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDTLQVC*YLLQVL
Trigger: CAGAACTTGGAGCAGATATCAGCAGACTTGCAGGGT...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCTTATCTTCTCATTGTTaGGGGAATGCTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: APPLASNLKLWSQQNFSSLSSHC*GNACCL
Trigger: AAGACAGCAAGCATTCCCTCAACAATGAGAAGATAA...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCATTGACTCTCCCAGATTaGATTTCCTATTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPLTLPD*ISYCKN
Trigger: ATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAA...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGAATTGGTCCCCAGTTTaGCTCTCCCAGATTGAATTT +
Preference number: 4 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGNWSPV*LSQIEF
Trigger: AAATTCAATCTGGGAGAGTCAAACTGGGGACCAATT...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAAAAAAGAGGAAAGTTCTaGATTGGTCCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKKRGKF*IGPQFD
Trigger: GTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTT...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
48% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAAAAAGAGGAAAGTTCTaGATTGGTCCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPKRGKF*IGPQFD
Trigger: GTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTT...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACGTTATTTCTGTCTTCTaGTCCAGGTCATCATGTACT +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHVISVF*SRSSCT
Trigger: AGTACATGATGACCTGGATCAGAAGACAGAAATAAC...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCGTTATTTCTGTCTTCTaGTCCAGGTCATCATGTACT +
Preference number: 4 (lower is better)
Translates to: APPLASNLKLWSQQNFSSVISVF*SRSSCT
Trigger: AGTACATGATGACCTGGATCAGAAGACAGAAATAAC...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACAATTCTCTATCCGCTTaGGATTTGACTGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHNSLSA*DLTEKS
Trigger: GGATTTCTCAGTCAAATCTCAAGCGGATAGAGAATT...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAATGCGCTATTCTCTTCTaGCATTACAGTGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WAFWSGVTLQQITVLHMQCAILF*HYSVAE
Trigger: CTCTGCCACACTGTAATGTCAGAAGAGAATAGCGCA...TTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GTAGTCAGCAATATGTTGCCCATCTTCTCCAGCCACGTTGTAAAAGGCCCCATAAGCCCCTTCATCAGGTaGCTGAACTTGGTAAATCAG +
Preference number: 4 (lower is better)
Translates to: VVSNMLPIFSSHVVKGPISPFIR*LNLVNQ
Trigger: CTGATTTACCAAGTTCAGTCACCTGATGAAGGGGCT...TATGGGGCCTTTTACAACGTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACAGCCCCTTCATCAGGTaGCTGAACTTGGTAAATCAG +
Preference number: 4 (lower is better)
Translates to: ENYKPDALLGQGMSCITNSPFIR*LNLVNQ
Trigger: CTGATTTACCAAGTTCAGTCACCTGATGAAGGGGCT...GTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACCCCCTGCAAATTCACTaGGGTGGTCTGACGTCAAAG +
Preference number: 4 (lower is better)
Translates to: DVINESPVTGIQGYLHTDPLQIH*GGLTSK
Trigger: CTTTGACGTCAGACCACCTCAGTGAATTTGCAGGGG...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGACAGCTCCACCTGAAGTaGAAAGATAACTACGTGGTT +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGQLHLK*KDNYVV
Trigger: AACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTG...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGTCACAAACCAGACAGTaGCCCTCTGGCCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLESQTRQ*PSGLVF
Trigger: GAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGA...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAAAGCATGTCCTTACATaGCACAGACTGAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPKHVLT*HRLRAF
Trigger: AAAAGCTCTCAGTCTGTGTCATGTAAGGACATGCTT...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AGTCTCAGTTCTCTCCCAGTTCCCCATCTAGTGCCCTTACACTGGAGCTACCTTCTGTCACTGAAAGAATaGAGCAAAGTCTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SLSSLPVPHLVPLHWSYLLSLKE*SKVSVL
Trigger: GAGAACTGAGACTTTGCTTCATTCTTTCAGTGACAG...AAGGTAGCTCCAGTGTAAGGGCACTAGATGGGGAACTGGGAGAGAACTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR GCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTAAGATTTCTCAGCAGTaGAGGAAGATCAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCKISQQ*RKIKQV
Trigger: TACCTGTTTGATCTTCCTGCACTGCTGAGAAATCTT...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
CDS-3UTR GCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAAATCCCATCAAACCCTaGAAGTCTGCTGATATCTGC +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGNPIKP*KSADIC
Trigger: GCAGATATCAGCAGACTTGCAGGGTTTGATGGGATT...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATGGTATTTCTCAGGATaGAGCCTCTCAGGATTATCT +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPWYFSG*SLSGLS
Trigger: AGATAATCCTGAGAGGCTGCATCCTGAGAAATACCA...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAATGGTATTTCTCAGGATaGAGCCTCTCAGGATTATCT +
Preference number: 4 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKWYFSG*SLSGLS
Trigger: AGATAATCCTGAGAGGCTGCATCCTGAGAAATACCA...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGTGGTATTTCTCAGGATaGAGCCTCTCAGGATTATCT +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIAWYFSG*SLSGLS
Trigger: AGATAATCCTGAGAGGCTGCATCCTGAGAAATACCA...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAAAAATGTACTCAATCTaGCCCAGTTCCTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPKMYSI*PSSSLS
Trigger: GCTCAATGAGGAACTGGGGCAGATTGAGTACATTTT...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGATCCAGGTCTCTGTATaGGATGGCCAAGGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKIQVSV*DGQGPK
Trigger: CTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGACACAGCATTATTCCCTaGTATCACAAACACATCATT +
Preference number: 4 (lower is better)
Translates to: AICLPHLLPQISNSGASRHSIIP*YHKHII
Trigger: AATGATGTGTTTGTGATAGCAGGGAATAATGCTGTG...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTTTACAGTCTTACACATaGAAGCAAGTTCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQILQSYT*KQVLGD
Trigger: ATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAA...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGCTGGCTAAGACTGCTTaGAATCCTTCCTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTLAKTA*NPSWPL
Trigger: CAGCGGCCAGGAAGGATTGCAAGCAGTCTTAGCCAG...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR GCA 90 bp GAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACGTATCCAAGGCTATCTaGACACTGACCACAATGACC +
Preference number: 4 (lower is better)
Translates to: ENYKPDALLGQGMSCITNVSKAI*TLTTMT
Trigger: GGTCATTGTGGTCAGTGTGCAGATAGCCTTGGATAC...GTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCTTCTTGAGCTTGACCTaGGGGTCCGAGGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFFLSLT*GSEAFG
Trigger: GCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAA...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CTCAGTTCTCTCCCAGTTCCCCATCTAGTGCCCTTACACTGGAGCTACCTTGATAGGCAAATCAATAGGTaGTTTGCCTGCAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: LSSLPVPHLVPLHWSYLDRQINR*FACKNR
Trigger: ACGATTCTTGCAGGCAAAGCACCTATTGATTTGCCT...ATCAAGGTAGCTCCAGTGTAAGGGCACTAGATGGGGAACTGGGAGAGAACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR CCA 90 bp ACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATATCCCAGGTCTCAACAGGTaGCCTACCTCAACCCAGACT +
Preference number: 4 (lower is better)
Translates to: TFGNKTTFHEQGEAFGDIPGLNR*PTSTQT
Trigger: AGTCTGGGTTGAGGTAGGCCACCTGTTGAGACCTGG...GATATCTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000558906.5
CDS-3UTR CCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGATTCCAAAACACCAGCTaGTATTTCTCAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGFQNTS*YFSGCS
Trigger: GCTGCATCCTGAGAAATACCAGCTGGTGTTTTGGAA...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCTATCTTCTACAGCAGTaGCACCTAGTAGCATCAAAT +
Preference number: 4 (lower is better)
Translates to: APPLASNLKLWSQQNFSSYLLQQ*HLVASN
Trigger: ATTTGATGCTACTAGGTGCCACTGCTGTAGAAGATA...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCACCACTTGGGCTTTCTaGAGTGGAGTGACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISTTWAF*SGVTLQ
Trigger: CTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CAGCAGTTTCAACATAACAGAGACCATGTGGCTCACTACTTGATAGGAGAAGTAACCACTTGGGCTTTCTaGAGTGGAGTGACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QQFQHNRDHVAHYLIGEVTTWAF*SGVTLQ
Trigger: CTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT...TACTTCTCCTATCAAGTAGTGAGCCACATGGTCTCTGTTATGTTGAAACTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTAGGCCTTCGGCTACTTaGAGGCCTTGCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVRPSAT*RPCLLL
Trigger: CAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCT...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGCTGTTTGATGGGCACTaGCAGTTGTCTGCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLELFDGH*QLSAAD
Trigger: ATCTGCGGCAGACAACTGCCAGTGCCCATCAAACAG...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTCTGTTTGATGGGCACTaGCAGTTGTCTGCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVLFDGH*QLSAAD
Trigger: ATCTGCGGCAGACAACTGCCAGTGCCCATCAAACAG...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACGAACATTATTATACCTaGTCTTTCACCAGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHEHYYT*SFTRSQ
Trigger: TTGAGACCTGGTGAAAGATCAGGTATAATAATGTTC...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAAATTGGTCCCCAGTTTaGCTCTCCCAGATTGAATTT +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGNWSPV*LSQIEF
Trigger: AAATTCAATCTGGGAGAGTCAAACTGGGGACCAATT...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATGCCCCAGTTCCTCATTaGGCGTGGTCGTTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNAPVPH*AWSFEP
Trigger: TGGCTCGAACGACCACGCTCAATGAGGAACTGGGGC...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR TCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAAGTTATTTCTGTCTTCTaGTCCAGGTCATCATGTACT +
Preference number: 4 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKVISVF*SRSSCT
Trigger: AGTACATGATGACCTGGATCAGAAGACAGAAATAAC...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAACGCTTGAGATTTGACTaGGAAATCCACAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: WAFWSGVTLQQITVLHMQRLRFD*EIHRLF
Trigger: AAAGAGCCTGTGGATTTCTCAGTCAAATCTCAAGCG...TTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TTCATCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCCGCTTGAGATTTGACTaGGAAATCCACAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FIPLFCGSIRIFKHLMPLRLRFD*EIHRLF
Trigger: AAAGAGCCTGTGGATTTCTCAGTCAAATCTCAAGCG...GAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACTATCCGCTTGAGATTTaGCTGAGAAATCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: ENYKPDALLGQGMSCITNYPLEI*LRNPQA
Trigger: AGCCTGTGGATTTCTCAGTCAAATCTCAAGCGGATA...GTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCAGGCATAACCGATCCCCTGCAAATTCACTaGGGTGGTCTGACGTCAAAG +
Preference number: 4 (lower is better)
Translates to: YHKHIIHVVSQHVAGITDPLQIH*GGLTSK
Trigger: CTTTGACGTCAGACCACCTCAGTGAATTTGCAGGGG...ATCGGTTATGCCTGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACGCGCACACTCCTGTTTaGTGGGCACTGGCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHAHTPV*WALAVV
Trigger: GACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGC...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCTAGGAGATCATTCTCACAAACCAGACAGTaGCCCTCTGGCCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TLQQITVLHMQASSRRSFSQTRQ*PSGLVF
Trigger: GAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGA...GAATGATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAATGTGGACTGAAATTTaGGCTGCAACATCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPMWTEI*AATSPK
Trigger: TTTTGGAGATGTTGCAGCTCAAATTTCAGTCCACAT...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGGATTCATATGTGGACTaGAATTTGAGCTGCAACATC +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIADSYVD*NLSCNI
Trigger: GATGTTGCAGCTCAAATTTCAGTCCACATATGAATC...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGTCAGAGTTTGTGCTTTaGCAGACAATCATCAACCAA +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIASEFVL*QTIINQ
Trigger: TTGGTTGATGATTGTCTGTCAAAGCACAAACTCTGA...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR TCA 90 bp ACAATCATCAACCAACCACATGAGGTAGGTAGTATGTCCTCATTTTACAGAGGAACTGAAACTCAGCCATaGGACCCCAGAGATGGGCGA +
Preference number: 4 (lower is better)
Translates to: TIINQPHEVGSMSSFYRGTETQP*DPRDGR
Trigger: TCGCCCATCTCTGGGGTCTCATGGCTGAGTTTCAGT...TCCTCTGTAAAATGAGGACATACTACCTACCTCATGTGGTTGGTTGATGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR GCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGGGTCGTTCGAGCCACTaGAGGTATTGCTTTTCGAGA +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKGRSSH*RYCFSR
Trigger: TCTCGAAAAGCAATACCTGCAGTGGCTCGAACGACC...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTTTACAGTCTTACACATaGAAGCAAGTTCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCLQSYT*KQVLGD
Trigger: ATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAA...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATTTCTTGAGCTTGACCTaGGGGTCCGAGGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNFLSLT*GSEAFG
Trigger: GCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAA...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp ACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCTAGGAGATCATTCGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: TLQQITVLHMQASSRRSFACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...GAATGATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATATATTCACGGTCATTaGCTTTCACTATCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPYIHGH*LSLSVP
Trigger: TGGAACGGATAGTGAAAGCCAATGACCGTGAATATA...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAATATATTCACGGTCATTaGCTTTCACTATCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKYIHGH*LSLSVP
Trigger: TGGAACGGATAGTGAAAGCCAATGACCGTGAATATA...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGTAACTGATAGTGCATaGCGGACTTTTAGGTTCGTT +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGVTDSA*RTFRFV
Trigger: AACGAACCTAAAAGTCCGCCATGCACTATCAGTTAC...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTTATTGTTATGGTCTCTaGGGTCCGGGATTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCYCYGL*GPGFKN
Trigger: ATTTTTAAATCCCGGACCCCAGAGACCATAACAATA...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGCTTTATCTGTCCTTCTaGGTTTCGAACTATGACAGA +
Preference number: 4 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGLYLSF*VSNYDR
Trigger: TCTGTCATAGTTCGAAACCCAGAAGGACAGATAAAG...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCACTTTATCTGTCCTTCTaGGTTTCGAACTATGACAGA +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPLYLSF*VSNYDR
Trigger: TCTGTCATAGTTCGAAACCCAGAAGGACAGATAAAG...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGTTGGGCTTTCTGGAGTaGAGTGACCCTGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLELGFLE*SDPAAN
Trigger: ATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAA...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGCAGATTCAGCTGTCCTaGTTTGTAGAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKQIQLS*FVELGT
Trigger: TGTCCCCAGCTCTACAAACCAGGACAGCTGAATCTG...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACTGCATTACCAACAAATaGAAACTGGTTTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHCITNK*KLVWED
Trigger: ATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCA...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACTCAAATCTCAAACTCTaGAGCCAGCAGAATTTCAGC +
Preference number: 4 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHSNLKL*SQQNFS
Trigger: GCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGA...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGATCAAATCTCAAACTCTaGAGCCAGCAGAATTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGSNLKL*SQQNFS
Trigger: GCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGA...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGCTGTTTGATGGGCACTaGCAGTTGTCTGCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTLFDGH*QLSAAD
Trigger: ATCTGCGGCAGACAACTGCCAGTGCCCATCAAACAG...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAGTGACCCTCTGGCCTaGTTTTCCATAGCGCACACT +
Preference number: 4 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNESDPLA*FSIAHT
Trigger: AGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACT...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGATCACTCAGGGTTGGGTTTTAAAAGTATACCTTaGGAAAGGCTGATCTTACAG +
Preference number: 4 (lower is better)
Translates to: LPSFEPSATGGSDHSGLGFKSIP*ERLILQ
Trigger: CTGTAAGATCAGCCTTTCCCAAGGTATACTTTTAAA...ACCCAACCCTGAGTGATCAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTCATCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCGAAAAACCAGGGCCTTaGTGTTTGAGTAACGGCAAT +
Preference number: 4 (lower is better)
Translates to: FIPLFCGSIRIFKHLMPLEKPGP*CLSNGN
Trigger: ATTGCCGTTACTCAAACACCAAGGCCCTGGTTTTTC...GAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558458.1
3UTR CAA 72 bp TTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACCTCTaGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: FKLSEAICLPHL*PQISNSGASRI
Trigger: AATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAACTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCTAGGAGATCATTCACCCTGCAAGTCTGCTaGTATCTGCTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TLQQITVLHMQASSRRSFTLQVC*YLLQVL
Trigger: CAGAACTTGGAGCAGATATCAGCAGACTTGCAGGGT...GAATGATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGACCCTGCAAGTCTGCTaGTATCTGCTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNETLQVC*YLLQVL
Trigger: CAGAACTTGGAGCAGATATCAGCAGACTTGCAGGGT...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGTTGACTCTCCCAGATTaGATTTCCTATTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIALTLPD*ISYCKN
Trigger: ATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAA...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GTAGTCAGCAATATGTTGCCCATCTTCTCCAGCCACGTTGTAAAAGGCCCCATAAATTGGTCCCCAGTTTaGCTCTCCCAGATTGAATTT +
Preference number: 4 (lower is better)
Translates to: VVSNMLPIFSSHVVKGPINWSPV*LSQIEF
Trigger: AAATTCAATCTGGGAGAGTCAAACTGGGGACCAATT...TATGGGGCCTTTTACAACGTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGCTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAG +
Preference number: 4 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNELSGVE*PCSKLQ
Trigger: CTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAG...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGTGTCTTTTCCAGCCCTaGTGTTGGGGGTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: NATTGITEATVVKRITSQCLFQP*CWGWIF
Trigger: AAAAATCCACCCCCAACATCAGGGCTGGAAAAGACA...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CCCTGCTATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCAGGCATACAGCTCCACCTGAAGTaGAAAGATAACTACGTGGTT +
Preference number: 4 (lower is better)
Translates to: PCYHKHIIHVVSQHVAGIQLHLK*KDNYVV
Trigger: AACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTG...TATGCCTGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATAGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAAATTTCAGCTCCACCTaGAGTGAAAAGATAACTACG +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGNFSST*SEKITT
Trigger: CGTAGTTATCTTTTCACTTCAGGTGGAGCTGAAATT...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTGATTCCACGCACAGAGTATGTTCTAACAGACACCACCTTCCAGGGTATTATTACACTGGAGCTACCTTaGTTCCACGCACAGAGTATG +
Preference number: 4 (lower is better)
Translates to: LIPRTEYVLTDTTFQGIITLELP*FHAQSM
Trigger: CATACTCTGTGCGTGGAATCAAGGTAGCTCCAGTGT...AATAATACCCTGGAAGGTGGTGTCTGTTAGAACATACTCTGTGCGTGGAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR TCA 90 bp ACAATCATCAACCAACCACATGAGGTAGGTAGTATGTCCTCATTTTACAGAGGAGTAGGATTGGGGAACTaGAACTCAGCCATGAGACCC +
Preference number: 4 (lower is better)
Translates to: TIINQPHEVGSMSSFYRGVGLGN*NSAMRP
Trigger: GGGTCTCATGGCTGAGTTTCAGTTCCCCAATCCTAC...TCCTCTGTAAAATGAGGACATACTACCTACCTCATGTGGTTGGTTGATGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR GCA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGAGCCACTGCAGGTATTaGTTTTCGAGAATAATACAT +
Preference number: 4 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGSHCRY*FSRIIH
Trigger: ATGTATTATTCTCGAAAAGCAATACCTGCAGTGGCT...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGCCGAAGGCCTTCCCCTaGAAATTCACTGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLPKAFP*KFTEVV
Trigger: GACCACCTCAGTGAATTTGCAGGGGAAGGCCTTCGG...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTTACAGTCTTACACATaGAAGCAAGTTCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGLQSYT*KQVLGD
Trigger: ATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAA...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCCTGGCTAAGACTGCTTaGAATCCTTCCTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFLAKTA*NPSWPL
Trigger: CAGCGGCCAGGAAGGATTGCAAGCAGTCTTAGCCAG...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGCTGGCTAAGACTGCTTaGAATCCTTCCTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLLAKTA*NPSWPL
Trigger: CAGCGGCCAGGAAGGATTGCAAGCAGTCTTAGCCAG...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp GAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACACTGGTTTGGGAAGATaGCAAAGATGCCATTACTGT +
Preference number: 4 (lower is better)
Translates to: ENYKPDALLGQGMSCITNTGLGR*QRCHYC
Trigger: ACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGT...GTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTACCAGGTCTCAACAGGTaGCCTACCTCAACCCAGACT +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLPGLNR*PTSTQT
Trigger: AGTCTGGGTTGAGGTAGGCCACCTGTTGAGACCTGG...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CCA 90 bp TGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCAAAAATATTGTTATGGTCTCTaGGGTCCGGGATTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: CRAGDSPRCSGHSHPGQKYCYGL*GPGFKN
Trigger: ATTTTTAAATCCCGGACCCCAGAGACCATAACAATA...TTTTTGACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGACTTTATCTGTCCTTCTaGGTTTCGAACTATGACAGA +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGLYLSF*VSNYDR
Trigger: TCTGTCATAGTTCGAAACCCAGAAGGACAGATAAAG...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGCATCCCTCTCTTCTGTaGCAGCATTCGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKHPSLL*QHSHLQ
Trigger: TTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATG...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACACCACTTGGGCTTTCTaGAGTGGAGTGACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHTTWAF*SGVTLQ
Trigger: CTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCGCTTGCAATCCTTCCTaGCCGCTGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFACNPS*PLMPTP
Trigger: TGGTGTTGGCATCAGCGGCCAGGAAGGATTGCAAGC...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCCAAATGAATAGTCGCTaGCTAAGACTGCTTGCAATC +
Preference number: 4 (lower is better)
Translates to: LEWSDPAANYSLTHASKFQMNSR*LRLLAI
Trigger: GATTGCAAGCAGTCTTAGCCAGCGACTATTCATTTG...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CAGAATAGTATCTGCTCCTTTGGAATAAAGCTTTATCTGTCCTTCTGGGTTTCGCAGTCCACGCTGTTCTaGTCACTCACATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: QNSICSFGIKLYLSFWVSQSTLF*SLTSWS
Trigger: TGACCAGGATGTGAGTGACCAGAACAGCGTGGACTG...CGAAACCCAGAAGGACAGATAAAGCTTTATTCCAAAGGAGCAGATACTATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGCAGATTCAGCTGTCCTaGTTTGTAGAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTQIQLS*FVELGT
Trigger: TGTCCCCAGCTCTACAAACCAGGACAGCTGAATCTG...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CCA 90 bp CTGGGTTTCGAACTGCGCTATTCTCTTCTGACATTACAGTGTGGCAGAGAGCAACCAACAAATGGAAACTaGTTTGGGAAGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LGFELRYSLLTLQCGREQPTNGN*FGKMPK
Trigger: CTTTGGCATCTTCCCAAACCAGTTTCCATTTGTTGG...TTGCTCTCTGCCACACTGTAATGTCAGAAGAGAATAGCGCAGTTCGAAACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558906.5
CDS-3UTR CCA 90 bp ACAATCATCAACCAACCACATGAGGTAGGTAGTATGTCCTCATTTTACAGAGGAAGTGACCCTCTGGCCTaGTTTTCCATAGCGCACACT +
Preference number: 4 (lower is better)
Translates to: TIINQPHEVGSMSSFYRGSDPLA*FSIAHT
Trigger: AGTGTGCGCTATGGAAAACCAGGCCAGAGGGTCACT...TCCTCTGTAAAATGAGGACATACTACCTACCTCATGTGGTTGGTTGATGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CCA 90 bp GGCACCAAGTGTTGGAGAACAGGCAAATCAATAGGTGCTTTGCCTGCAAGAATCCATGGCACCAAGTGTTaGAGAACAGGCAAATCAATA +
Preference number: 4 (lower is better)
Translates to: GTKCWRTGKSIGALPARIHGTKC*RTGKSI
Trigger: TATTGATTTGCCTGTTCTCCAACACTTGGTGCCATG...GATTCTTGCAGGCAAAGCACCTATTGATTTGCCTGTTCTCCAACACTTGGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558024.1
3UTR CAA 72 bp GCATCTTCAAGCATCTTATGCCACTCTTTAAAGTACTaGTCATCCAGGTCTCTGTATGCGATGGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: ASSSILCHSLKY*SSRSLYAMAKV
Trigger: GACCTTGGCCATCGCATACAGAGACCTGGATGACAAGTACTTTAAAGAGTGGCATAAGATGCTTGAAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558458.1
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAGCCCCTTCATCAGGTaGCTGAACTTGGTAAATCAG +
Preference number: 4 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNESPFIR*LNLVNQ
Trigger: CTGATTTACCAAGTTCAGTCACCTGATGAAGGGGCT...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTCTGGGTTTCGAACTATaGCAGACATCCTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TVVKRITSQMHFWVRECRLGFEL*QTSFFW
Trigger: CCAGAAAAAGGATGTCTGTCATAGTTCGAAACCCAG...ACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCAGGCATAACCGATTTCACTGAGGTGGTCTaGCGTCAAAGACAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: YHKHIIHVVSQHVAGITDFTEVV*RQRQKD
Trigger: GTCCTTTTGTCTTTGACGTCAGACCACCTCAGTGAA...ATCGGTTATGCCTGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCCCCCTGCAAATTCACTaGGGTGGTCTGACGTCAAAG +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFPLQIH*GGLTSK
Trigger: CTTTGACGTCAGACCACCTCAGTGAATTTGCAGGGG...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATCCCCTGCAAATTCACTaGGGTGGTCTGACGTCAAAG +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHPLQIH*GGLTSK
Trigger: CTTTGACGTCAGACCACCTCAGTGAATTTGCAGGGG...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCTTTACTAGGAGATCATTCTTaGCATCACTTTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLSSVAAFASSSILCHSLLGDHS*HHFLGH
Trigger: ATGCCCTAGAAAGTGATGTCAAGAATGATCTCCTAG...TAAAGAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACCTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAG +
Preference number: 4 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDLSGVE*PCSKLQ
Trigger: CTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAG...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR TCA 90 bp TGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAAATTTCAGCTCCACCTaGAGTGAAAAGATAACTACG +
Preference number: 4 (lower is better)
Translates to: WAFWSGVTLQQITVLHMQNFSST*SEKITT
Trigger: CGTAGTTATCTTTTCACTTCAGGTGGAGCTGAAATT...TTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACTCACAAACCAGACAGTaGCCCTCTGGCCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHSQTRQ*PSGLVF
Trigger: GAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGA...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCACATGCAACTCAGTCTaGAAGCAACACAGTACACGC +
Preference number: 4 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISTCNSV*KQHSTR
Trigger: GCGTGTACTGTGTTGCTTTCAGACTGAGTTGCATGT...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp GTAGTCAGCAATATGTTGCCCATCTTCTCCAGCCACGTTGTAAAAGGCCCCATAAAGATTTCTCAGCAGTaGAGGAAGATCAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: VVSNMLPIFSSHVVKGPIKISQQ*RKIKQV
Trigger: TACCTGTTTGATCTTCCTGCACTGCTGAGAAATCTT...TATGGGGCCTTTTACAACGTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000558906.5
CDS-3UTR GCA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGTTTAGTGTCAGGACCTaGAAAAATAACCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIAFSVRT*KNNHSK
Trigger: TTTGGAATGGTTATTTTTGCAGGTCCTGACACTAAA...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATTTAGTGTCAGGACCTaGAAAAATAACCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: PHLLPQISNSGASRISAPFSVRT*KNNHSK
Trigger: TTTGGAATGGTTATTTTTGCAGGTCCTGACACTAAA...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACAGCCACTGCAGGTATTaGTTTTCGAGAATAATACAT +
Preference number: 4 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHSHCRY*FSRIIH
Trigger: ATGTATTATTCTCGAAAAGCAATACCTGCAGTGGCT...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACATCCAGGTCTCTGTATaGGATGGCCAAGGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHIQVSV*DGQGPK
Trigger: CTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGACACAGCATTATTCCCTaGTATCACAAACACATCATT +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGHSIIP*YHKHII
Trigger: AATGATGTGTTTGTGATAGCAGGGAATAATGCTGTG...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGCCTGCCCCACCTCTTaGCTCAAATCTCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHACPTS*LKSQTL
Trigger: CAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGC...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGTTCCAAAACACCAGCTaGTATTTCTCAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEFQNTS*YFSGCS
Trigger: GCTGCATCCTGAGAAATACCAGCTGGTGTTTTGGAA...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACGCAAATTCACTGAGGTaGTCTGACGTCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDANSLR*SDVKDK
Trigger: TTTGTCTTTGACGTCAGACCACCTCAGTGAATTTGC...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CAGCAGTTTCAACATAACAGAGACCATGTGGCTCACTACTTGATAGGAGAAGTACATCCCTCTCTTCTGTaGCAGCATTCGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: QQFQHNRDHVAHYLIGEVHPSLL*QHSHLQ
Trigger: TTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATG...TACTTCTCCTATCAAGTAGTGAGCCACATGGTCTCTGTTATGTTGAAACTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTCATCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCTATCTTCTACAGCAGTaGCACCTAGTAGCATCAAAT +
Preference number: 4 (lower is better)
Translates to: FIPLFCGSIRIFKHLMPLYLLQQ*HLVASN
Trigger: ATTTGATGCTACTAGGTGCCACTGCTGTAGAAGATA...GAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATACCAGCTCTACCACTTaGGCTTTCTGGAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHTSSTT*AFWSGV
Trigger: CACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGT...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCCAGTCCACGCTGTTCTaGTCACTCACATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFQSTLF*SLTSWS
Trigger: TGACCAGGATGTGAGTGACCAGAACAGCGTGGACTG...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGCAGTCCACGCTGTTCTaGTCACTCACATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLQSTLF*SLTSWS
Trigger: TGACCAGGATGTGAGTGACCAGAACAGCGTGGACTG...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATAGGCCTTCGGCTACTTaGAGGCCTTGCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHRPSAT*RPCLLL
Trigger: CAAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCT...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTCACTGTTTTATCCTaGCTAAAGCTGCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKFTVLS*LKLLTV
Trigger: CACCGTGAGCAGCTTTAGCCAGGATAAAACAGTGAA...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp CCCTTACACTGGAGCTACCTTGATTCCACGCACAGAGTATGTTCTAACAGACACAAGAGAATCACAGCATaGAACGGATTTTTGAGATCC +
Preference number: 4 (lower is better)
Translates to: PLHWSYLDSTHRVCSNRHKRITA*NGFLRS
Trigger: GGATCTCAAAAATCCGTTCCATGCTGTGATTCTCTT...GTGTCTGTTAGAACATACTCTGTGCGTGGAATCAAGGTAGCTCCAGTGTAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR CCA 90 bp TTGATTCCACGCACAGAGTATGTTCTAACAGACACCACCTTCCAGGGTATTATTCCTGTTGATGGAACATaGCACCAAGTGTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: LIPRTEYVLTDTTFQGIIPVDGT*HQVLEN
Trigger: GTTCTCCAACACTTGGTGCCATGTTCCATCAACAGG...AATAATACCCTGGAAGGTGGTGTCTGTTAGAACATACTCTGTGCGTGGAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558024.1
3UTR CAA 72 bp GGGAATGTCGTGCATTACCAACAAATGGAAACTGGTTaGGGAAGATGCCAAAGATGCCATTACTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: GNVVHYQQMETG*GRCQRCHYCAL
Trigger: CAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCACGACATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACCAGGTATCCATTCCGTaGCCATGCCAAGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHQVSIP*PCQGEK
Trigger: CTTTTCTCCTTGGCATGGTCACGGAATGGATACCTG...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284509.11
CDS-3UTR TCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTACAGGTATCCATTCCGTaGCCATGCCAAGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLQVSIP*PCQGEK
Trigger: CTTTTCTCCTTGGCATGGTCACGGAATGGATACCTG...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR TCA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCGAACATTATTATACCTaGTCTTTCACCAGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LEWSDPAANYSLTHASKFEHYYT*SFTRSQ
Trigger: TTGAGACCTGGTGAAAGATCAGGTATAATAATGTTC...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAACCCTGCAAGTCTGCTaGTATCTGCTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLTLQVC*YLLQVL
Trigger: CAGAACTTGGAGCAGATATCAGCAGACTTGCAGGGT...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR TCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGAATTGGTCCCCAGTTTaGCTCTCCCAGATTGAATTT +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLENWSPV*LSQIEF
Trigger: AAATTCAATCTGGGAGAGTCAAACTGGGGACCAATT...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGCTAGGAGATCATTCTTaGCATCACTTTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKLGDHS*HHFLGH
Trigger: ATGCCCTAGAAAGTGATGTCAAGAATGATCTCCTAG...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGCTTTCTGGAGTGGAGTaGCCCTGCAGCAAATTACAG +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLLSGVE*PCSKLQ
Trigger: CTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAG...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACAAATAAGCATGTCCTTACATaGCACAGACTGAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ITSQMHFWVRECRALPTNKHVLT*HRLRAF
Trigger: AAAAGCTCTCAGTCTGTGTCATGTAAGGACATGCTT...ATTTGTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR TCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGAAGCATGTCCTTACATaGCACAGACTGAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKKHVLT*HRLRAF
Trigger: AAAAGCTCTCAGTCTGTGTCATGTAAGGACATGCTT...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ACTGGAGCTACCTTGATTCCACGCACAGAGTATGTTCTAACAGACACCACCTTCAGTCTTTACTGTCACTaGAAGAATGAAGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: TGATLIPRTEYVLTDTTFSLYCH*KNEAKS
Trigger: AGACTTTGCTTCATTCTTTCAGTGACAGTAAAGACT...GAAGGTGGTGTCTGTTAGAACATACTCTGTGCGTGGAATCAAGGTAGCTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR GCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGAATCCCATCAAACCCTaGAAGTCTGCTGATATCTGC +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTNPIKP*KSADIC
Trigger: GCAGATATCAGCAGACTTGCAGGGTTTGATGGGATT...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR GCA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACTGGTATTTCTCAGGATaGAGCCTCTCAGGATTATCT +
Preference number: 4 (lower is better)
Translates to: DVINESPVTGIQGYLHTDWYFSG*SLSGLS
Trigger: AGATAATCCTGAGAGGCTGCATCCTGAGAAATACCA...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGGTCGTTCGAGCCACTaGAGGTATTGCTTTTCGAGA +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHGRSSH*RYCFSR
Trigger: TCTCGAAAAGCAATACCTGCAGTGGCTCGAACGACC...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGGGTCGTTCGAGCCACTaGAGGTATTGCTTTTCGAGA +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLGRSSH*RYCFSR
Trigger: TCTCGAAAAGCAATACCTGCAGTGGCTCGAACGACC...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGACTGGTTTGGGAAGATaGCAAAGATGCCATTACTGT +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKTGLGR*QRCHYC
Trigger: ACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGT...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TGCTTGCTGTCTTTCCAAGAAAGGATTCCCATGAATTTATCTAACTTGTTGTTAGTGAGGCAATCTGCCTaGCCCACCTCTTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: CLLSFQERIPMNLSNLLLVRQSA*PTSCLK
Trigger: TTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC...TAACAACAAGTTAGATAAATTCATGGGAATCCTTTCTTGGAAAGACAGCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGATTATATTTCGATGTGTaGATACGATTATCCGCATAC +
Preference number: 4 (lower is better)
Translates to: LSEAICLPHLLPQISNSGLYFDV*IRLSAY
Trigger: GTATGCGGATAATCGTATCCACACATCGAAATATAA...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGGTAACTGATAGTGCATaGCGGACTTTTAGGTTCGTT +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKVTDSA*RTFRFV
Trigger: AACGAACCTAAAAGTCCGCCATGCACTATCAGTTAC...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGGTAACTGATAGTGCATaGCGGACTTTTAGGTTCGTT +
Preference number: 4 (lower is better)
Translates to: NATTGITEATVVKRITSQVTDSA*RTFRFV
Trigger: AACGAACCTAAAAGTCCGCCATGCACTATCAGTTAC...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGTTCCAAAACACCAGCTaGTATTTCTCAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTFQNTS*YFSGCS
Trigger: GCTGCATCCTGAGAAATACCAGCTGGTGTTTTGGAA...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CCA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATTCTTCTATTGTTATaGTCTCTGGGGTCCGGGATT +
Preference number: 4 (lower is better)
Translates to: NATTGITEATVVKRITSQILLLL*SLGSGI
Trigger: AATCCCGGACCCCAGAGACCATAACAATAGAAGAAT...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559726.5
CDS-3UTR CCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATTCTTCTATTGTTATaGTCTCTGGGGTCCGGGATT +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEILLLL*SLGSGI
Trigger: AATCCCGGACCCCAGAGACCATAACAATAGAAGAAT...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTATTCTTCTATTGTTATaGTCTCTGGGGTCCGGGATT +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVILLLL*SLGSGI
Trigger: AATCCCGGACCCCAGAGACCATAACAATAGAAGAAT...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGGCAAATTCACTGAGGTaGTCTGACGTCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEANSLR*SDVKDK
Trigger: TTTGTCTTTGACGTCAGACCACCTCAGTGAATTTGC...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGTTGGGCTTTCTGGAGTaGAGTGACCCTGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLLGFLE*SDPAAN
Trigger: ATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAA...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTCAAATGAATAGTCGCTaGCTAAGACTGCTTGCAATC +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVQMNSR*LRLLAI
Trigger: GATTGCAAGCAGTCTTAGCCAGCGACTATTCATTTG...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGCAAATGAATAGTCGCTaGCTAAGACTGCTTGCAATC +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEQMNSR*LRLLAI
Trigger: GATTGCAAGCAGTCTTAGCCAGCGACTATTCATTTG...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACACAAGGAGAAGCCTTTaGAGATATCTAAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDTRRSL*RYLNCA
Trigger: TGCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGT...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATCAGTCCACGCTGTTCTaGTCACTCACATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNQSTLF*SLTSWS
Trigger: TGACCAGGATGTGAGTGACCAGAACAGCGTGGACTG...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCCAGATTCAGCTGTCCTaGTTTGTAGAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFQIQLS*FVELGT
Trigger: TGTCCCCAGCTCTACAAACCAGGACAGCTGAATCTG...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTCCAACAAATGGAAACTaGTTTGGGAAGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVPTNGN*FGKMPK
Trigger: CTTTGGCATCTTCCCAAACCAGTTTCCATTTGTTGG...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGCCAACAAATGGAAACTaGTTTGGGAAGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKPTNGN*FGKMPK
Trigger: CTTTGGCATCTTCCCAAACCAGTTTCCATTTGTTGG...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCTTCACTGTTTTATCCTaGCTAAAGCTGCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISFTVLS*LKLLTV
Trigger: CACCGTGAGCAGCTTTAGCCAGGATAAAACAGTGAA...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTCAAATCTCAAACTCTaGAGCCAGCAGAATTTCAGC +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKSNLKL*SQQNFS
Trigger: GCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGA...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR CAA 72 bp ACCAGCCTATCCTGCTGCAAAGATGTTCAGTCTCCTTaGTCCCTAGACTGGTATAAAAATGAGAAACACAAG +
Preference number: 4 (lower is better)
Translates to: TSLSCCKDVQSP*SLDWYKNEKHK
Trigger: CTTGTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTTATCTTCTCATTGTTaGGGGAATGCTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVLSSHC*GNACCL
Trigger: AAGACAGCAAGCATTCCCTCAACAATGAGAAGATAA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGAAAAGAGGAAAGTTCTaGATTGGTCCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTKRGKF*IGPQFD
Trigger: GTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTT...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR TCA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACTATCCGCTTGAGATTTaGCTGAGAAATCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDYPLEI*LRNPQA
Trigger: AGCCTGTGGATTTCTCAGTCAAATCTCAAGCGGATA...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR TCA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACAATTCTCTATCCGCTTaGGATTTGACTGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: DVINESPVTGIQGYLHTDNSLSA*DLTEKS
Trigger: GGATTTCTCAGTCAAATCTCAAGCGGATAGAGAATT...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCTGCGCTATTCTCTTCTaGCATTACAGTGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFCAILF*HYSVAE
Trigger: CTCTGCCACACTGTAATGTCAGAAGAGAATAGCGCA...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTAACTGTGGCCATTTATaGTTAAGGCATAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVNCGHL*LRHNLL
Trigger: CAGGAGATTATGCCTTAATCATAAATGGCCACAGTT...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCATGCCAACACCAATGTaGGCACTTTTAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: ITEATVVKRITSQMHFWVMPTPM*ALLIML
Trigger: CAGCATGATTAAAAGTGCTCACATTGGTGTTGGCAT...GACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGATGCCAACACCAATGTaGGCACTTTTAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTMPTPM*ALLIML
Trigger: CAGCATGATTAAAAGTGCTCACATTGGTGTTGGCAT...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR TCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATACATGCAACTCAGTCTaGAAGCAACACAGTACACGC +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHTCNSV*KQHSTR
Trigger: GCGTGTACTGTGTTGCTTTCAGACTGAGTTGCATGT...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACAAATGATTCATATGTGGACTaGAATTTGAGCTGCAACATC +
Preference number: 4 (lower is better)
Translates to: ITSQMHFWVRECRALPTNDSYVD*NLSCNI
Trigger: GATGTTGCAGCTCAAATTTCAGTCCACATATGAATC...ATTTGTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR GCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACAGCCACTGCAGGTATTaGTTTTCGAGAATAATACAT +
Preference number: 4 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDSHCRY*FSRIIH
Trigger: ATGTATTATTCTCGAAAAGCAATACCTGCAGTGGCT...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCTTTACACAGCATTATTCCCTaGTATCACAAACACATCATT +
Preference number: 4 (lower is better)
Translates to: SLSSVAAFASSSILCHSLHSIIP*YHKHII
Trigger: AATGATGTGTTTGTGATAGCAGGGAATAATGCTGTG...TAAAGAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACTTACAGTCTTACACATaGAAGCAAGTTCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDLQSYT*KQVLGD
Trigger: ATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAA...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp CTGCAGTATTTTTCTCAGGACCAGGATAAATCTTCTTCCTTACAATTACCAGAGGTATCCAAGGCTATCTaGACACTGACCACAATGACC +
Preference number: 4 (lower is better)
Translates to: LQYFSQDQDKSSSLQLPEVSKAI*TLTTMT
Trigger: GGTCATTGTGGTCAGTGTGCAGATAGCCTTGGATAC...CTCTGGTAATTGTAAGGAAGAAGATTTATCCTGGTCCTGAGAAAAATACTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGGGTCAGGGAATGTCGTaGATTACCAACAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTGQGMS*ITNKWK
Trigger: TTTCCATTTGTTGGTAATGCACGACATTCCCTGACC...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR GCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGGGTGGCCTACAGAAATaGATTCTAGTTTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKGGLQK*ILVSFS
Trigger: AGAAAAGGAAACTAGAATGCATTTCTGTAGGCCACC...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559829.5
CDS-3UTR CCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGCTTTATCTGTCCTTCTaGGTTTCGAACTATGACAGA +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKLYLSF*VSNYDR
Trigger: TCTGTCATAGTTCGAAACCCAGAAGGACAGATAAAG...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGGCAAATTCACTGAGGTaGTCTGACGTCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTANSLR*SDVKDK
Trigger: TTTGTCTTTGACGTCAGACCACCTCAGTGAATTTGC...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCCATCCCTCTCTTCTGTaGCAGCATTCGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFHPSLL*QHSHLQ
Trigger: TTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATG...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TGCTTGCTGTCTTTCCAAGAAAGGATTCCCATGAATTTATCTAACTTGTTGTTAACCAGCTCTACCACTTaGGCTTTCTGGAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: CLLSFQERIPMNLSNLLLTSSTT*AFWSGV
Trigger: CACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGT...TAACAACAAGTTAGATAAATTCATGGGAATCCTTTCTTGGAAAGACAGCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGACAAGGAGAAGCCTTTaGAGATATCTAAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKTRRSL*RYLNCA
Trigger: TGCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGT...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCTAGGAGATCATTCAAATGGAAACTGGTTTaGGAAGATGCCAAAGATGCC +
Preference number: 4 (lower is better)
Translates to: TLQQITVLHMQASSRRSFKWKLV*EDAKDA
Trigger: GGCATCTTTGGCATCTTCCCAAACCAGTTTCCATTT...GAATGATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp ACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATATCCCAACAAATGGAAACTaGTTTGGGAAGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TFGNKTTFHEQGEAFGDIPTNGN*FGKMPK
Trigger: CTTTGGCATCTTCCCAAACCAGTTTCCATTTGTTGG...GATATCTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp GGTCTAGCATCTTATTTGACACATGGACAAACCAAAGACAAAGAAGATAAAGTCCTAGTGCCCTTACACTaGAGCTACCTTGATTCCACG +
Preference number: 4 (lower is better)
Translates to: GLASYLTHGQTKDKEDKVLVPLH*SYLDST
Trigger: CGTGGAATCAAGGTAGCTCCAGTGTAAGGGCACTAG...GACTTTATCTTCTTTGTCTTTGGTTTGTCCATGTGTCAAATAAGATGCTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR CCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCCTTTATCTGTCCTTCTaGGTTTCGAACTGCGCTATT +
Preference number: 4 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISLYLSF*VSNCAI
Trigger: AATAGCGCAGTTCGAAACCCAGAAGGACAGATAAAG...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558906.5
CDS-3UTR TCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCCGCTTGAGATTTGACTaGGAAATCCACAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFRLRFD*EIHRLF
Trigger: AAAGAGCCTGTGGATTTCTCAGTCAAATCTCAAGCG...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AATGGAAACTGGTTTGGGAAGATGCCAAAGATGCCATTACTGTGCATTGTAAATTATCCGCTTGAGATTTaGCTGAGAAATCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: NGNWFGKMPKMPLLCIVNYPLEI*LRNPQA
Trigger: AGCCTGTGGATTTCTCAGTCAAATCTCAAGCGGATA...ATTTACAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCTATCCGCTTGAGATTTaGCTGAGAAATCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFYPLEI*LRNPQA
Trigger: AGCCTGTGGATTTCTCAGTCAAATCTCAAGCGGATA...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGTTTGTTTTGCTTTCCTaGGTTCTTCTCTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTFVLLS*VLLSLP
Trigger: TGGAAGTGAGAGAAGAACTCAGGAAAGCAAAACAAA...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR TCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATCAGCTCCACCTGAAGTaGAAAGATAACTACGTGGTT +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHQLHLK*KDNYVV
Trigger: AACCACGTAGTTATCTTTTCACTTCAGGTGGAGCTG...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp ACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATATCTCAGAGTTTGTGCTTTaGCAGACAATCATCAACCAA +
Preference number: 4 (lower is better)
Translates to: TFGNKTTFHEQGEAFGDISEFVL*QTIINQ
Trigger: TTGGTTGATGATTGTCTGTCAAAGCACAAACTCTGA...GATATCTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR GCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGATCCATTTTTCATTCTaGAGTTTGCTGTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKIHFSF*SLLLMS
Trigger: GCTCATCAACAGCAAACTGCAGAATGAAAAATGGAT...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559829.5
CDS-3UTR GCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAAATCCCATCAAACCCTaGAAGTCTGCTGATATCTGC +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLNPIKP*KSADIC
Trigger: GCAGATATCAGCAGACTTGCAGGGTTTGATGGGATT...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR GCA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACACTGGTTTGGGAAGATaGCAAAGATGCCATTACTGT +
Preference number: 4 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDTGLGR*QRCHYC
Trigger: ACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGT...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR GCA 90 bp ACAATCATCAACCAACCACATGAGGTAGGTAGTATGTCCTCATTTTACAGAGGAACTGGTTTGGGAAGATaGCAAAGATGCCATTACTGT +
Preference number: 4 (lower is better)
Translates to: TIINQPHEVGSMSSFYRGTGLGR*QRCHYC
Trigger: ACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGT...TCCTCTGTAAAATGAGGACATACTACCTACCTCATGTGGTTGGTTGATGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR GCA 90 bp ACAATCATCAACCAACCACATGAGGTAGGTAGTATGTCCTCATTTTACAGAGGAGGTCAGGGAATGTCGTaGATTACCAACAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: TIINQPHEVGSMSSFYRGGQGMS*ITNKWK
Trigger: TTTCCATTTGTTGGTAATGCACGACATTCCCTGACC...TCCTCTGTAAAATGAGGACATACTACCTACCTCATGTGGTTGGTTGATGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR GCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCGCACTGGCAGTTGTCTaGCGCAGATTTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFALAVV*RRFKLS
Trigger: ACTTAACTTAAATCTGCGGCAGACAACTGCCAGTGC...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATACCAGCCTATCCTGCTaGAAAGATGTTCAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNTSLSC*KDVQSP
Trigger: AGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGT...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATTCCAAAACACCAGCTaGTATTTCTCAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLFQNTS*YFSGCS
Trigger: GCTGCATCCTGAGAAATACCAGCTGGTGTTTTGGAA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTATTGTTATGGTCTCTaGGGTCCGGGATTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVYCYGL*GPGFKN
Trigger: ATTTTTAAATCCCGGACCCCAGAGACCATAACAATA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCACAAGGAGAAGCCTTTaGAGATATCTAAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: ITEATVVKRITSQMHFWVTRRSL*RYLNCA
Trigger: TGCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGT...GACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp AATGCCACCACTGGCATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGTGCATTACCAACAAATaGAAACTGGTTTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: NATTGITEATVVKRITSQCITNK*KLVWED
Trigger: ATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCA...CTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTATGCCAGTGGTGGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTGCATTACCAACAAATaGAAACTGGTTTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKCITNK*KLVWED
Trigger: ATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCA...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCTTGACTCTCCCAGATTaGATTTCCTATTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISLTLPD*ISYCKN
Trigger: ATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAA...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGAATTGGTCCCCAGTTTaGCTCTCCCAGATTGAATTT +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLNWSPV*LSQIEF
Trigger: AAATTCAATCTGGGAGAGTCAAACTGGGGACCAATT...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAAATTGGTCCCCAGTTTaGCTCTCCCAGATTGAATTT +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLNWSPV*LSQIEF
Trigger: AAATTCAATCTGGGAGAGTCAAACTGGGGACCAATT...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR TCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGAAAAGAGGAAAGTTCTaGATTGGTCCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLKRGKF*IGPQFD
Trigger: GTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTT...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAAAAAGAGGAAAGTTCTaGATTGGTCCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLKRGKF*IGPQFD
Trigger: GTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTT...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR TCA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACAATTCTCTATCCGCTTaGGATTTGACTGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDNSLSA*DLTEKS
Trigger: GGATTTCTCAGTCAAATCTCAAGCGGATAGAGAATT...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR TCA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATCTGGGTTTCGAACTATaGCAGACATCCTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNLGFEL*QTSFFW
Trigger: CCAGAAAAAGGATGTCTGTCATAGTTCGAAACCCAG...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACATGCCAACACCAATGTaGGCACTTTTAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHMPTPM*ALLIML
Trigger: CAGCATGATTAAAAGTGCTCACATTGGTGTTGGCAT...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCATGCCAACACCAATGTaGGCACTTTTAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFMPTPM*ALLIML
Trigger: CAGCATGATTAAAAGTGCTCACATTGGTGTTGGCAT...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACTGGTATTTCTCAGGATaGAGCCTCTCAGGATTATCT +
Preference number: 4 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHWYFSG*SLSGLS
Trigger: AGATAATCCTGAGAGGCTGCATCCTGAGAAATACCA...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATGGTATTTCTCAGGATaGAGCCTCTCAGGATTATCT +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLWYFSG*SLSGLS
Trigger: AGATAATCCTGAGAGGCTGCATCCTGAGAAATACCA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR GCA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTAGTGTCAGGACCTaGAAAAATAACCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKFSVRT*KNNHSK
Trigger: TTTGGAATGGTTATTTTTGCAGGTCCTGACACTAAA...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGTTTAGTGTCAGGACCTaGAAAAATAACCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEFSVRT*KNNHSK
Trigger: TTTGGAATGGTTATTTTTGCAGGTCCTGACACTAAA...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTTTAGTGTCAGGACCTaGAAAAATAACCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVFSVRT*KNNHSK
Trigger: TTTGGAATGGTTATTTTTGCAGGTCCTGACACTAAA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAGCCACTGCAGGTATTaGTTTTCGAGAATAATACAT +
Preference number: 4 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNESHCRY*FSRIIH
Trigger: ATGTATTATTCTCGAAAAGCAATACCTGCAGTGGCT...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCAGCCACTGCAGGTATTaGTTTTCGAGAATAATACAT +
Preference number: 4 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISSHCRY*FSRIIH
Trigger: ATGTATTATTCTCGAAAAGCAATACCTGCAGTGGCT...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR GCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCGGTCAGGGAATGTCGTaGATTACCAACAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFGQGMS*ITNKWK
Trigger: TTTCCATTTGTTGGTAATGCACGACATTCCCTGACC...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TGCTTGCTGTCTTTCCAAGAAAGGATTCCCATGAATTTATCTAACTTGTTGTTAACCAGCCTATCCTGCTaGAAAGATGTTCAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CLLSFQERIPMNLSNLLLTSLSC*KDVQSP
Trigger: AGGAGACTGAACATCTTTGCAGCAGGATAGGCTGGT...TAACAACAAGTTAGATAAATTCATGGGAATCCTTTCTTGGAAAGACAGCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTTATATTTCGATGTGTaGATACGATTATCCGCATAC +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVLYFDV*IRLSAY
Trigger: GTATGCGGATAATCGTATCCACACATCGAAATATAA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAGTAACTGATAGTGCATaGCGGACTTTTAGGTTCGTT +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLVTDSA*RTFRFV
Trigger: AACGAACCTAAAAGTCCGCCATGCACTATCAGTTAC...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CCA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGTATTGTTATGGTCTCTaGGGTCCGGGATTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: IENQHLVKCRQACKGKTTYCYGL*GPGFKN
Trigger: ATTTTTAAATCCCGGACCCCAGAGACCATAACAATA...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CCA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACACAAGGAGAAGCCTTTaGAGATATCTAAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDTRRSL*RYLNCA
Trigger: TGCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGT...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATAAATGGAAACTGGTTTaGGAAGATGCCAAAGATGCC +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHKWKLV*EDAKDA
Trigger: GGCATCTTTGGCATCTTCCCAAACCAGTTTCCATTT...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGTGCATTACCAACAAATaGAAACTGGTTTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNECITNK*KLVWED
Trigger: ATCTTCCCAAACCAGTTTCCATTTGTTGGTAATGCA...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATTCAAATCTCAAACTCTaGAGCCAGCAGAATTTCAGC +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHSNLKL*SQQNFS
Trigger: GCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGA...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTTTAAAAGTATACCTTaGGAAAGGCTGATCTTACAG +
Preference number: 4 (lower is better)
Translates to: APFYPPEDPFSEYAALQVFKSIP*ERLILQ
Trigger: CTGTAAGATCAGCCTTTCCCAAGGTATACTTTTAAA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR CAA 72 bp CAGTTTCAACATAACAGAGACCATGTGGCTCACTACTaGATAGGAGAAGTAAATCAGCAGCAACAAATTGGT +
Preference number: 4 (lower is better)
Translates to: QFQHNRDHVAHY*IGEVNQQQQIG
Trigger: ACCAATTTGTTGCTGCTGATTTACTTCTCCTATCAAGTAGTGAGCCACATGGTCTCTGTTATGTTGAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
3UTR CAA 72 bp CCTCTCAGGATTATCTTCTCATTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGGATTCCCATGAATTTA +
Preference number: 4 (lower is better)
Translates to: PLRIIFSLLREC*LSFQERIPMNL
Trigger: TAAATTCATGGGAATCCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAATGAGAAGATAATCCTGAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp CTGCAGTATTTTTCTCAGGACCAGGATAAATCTTCTTCCTTACAATTACCAGAGTTATCTTCTCATTGTTaGGGGAATGCTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LQYFSQDQDKSSSLQLPELSSHC*GNACCL
Trigger: AAGACAGCAAGCATTCCCTCAACAATGAGAAGATAA...CTCTGGTAATTGTAAGGAAGAAGATTTATCCTGGTCCTGAGAAAAATACTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCTTATCTTCTCATTGTTaGGGGAATGCTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFLSSHC*GNACCL
Trigger: AAGACAGCAAGCATTCCCTCAACAATGAGAAGATAA...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATTATCTTCTCATTGTTaGGGGAATGCTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLLSSHC*GNACCL
Trigger: AAGACAGCAAGCATTCCCTCAACAATGAGAAGATAA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR TCA 90 bp CAGAATAGTATCTGCTCCTTTGGAATAAAGCTTTATCTGTCCTTCTGGGTTTCGTTGACTCTCCCAGATTaGATTTCCTATTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: QNSICSFGIKLYLSFWVSLTLPD*ISYCKN
Trigger: ATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAA...CGAAACCCAGAAGGACAGATAAAGCTTTATTCCAAAGGAGCAGATACTATTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCGTTATTTCTGTCTTCTaGTCCAGGTCATCATGTACT +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFVISVF*SRSSCT
Trigger: AGTACATGATGACCTGGATCAGAAGACAGAAATAAC...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AATGGAAACTGGTTTGGGAAGATGCCAAAGATGCCATTACTGTGCATTGTAAATAATTCTCTATCCGCTTaGGATTTGACTGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: NGNWFGKMPKMPLLCIVNNSLSA*DLTEKS
Trigger: GGATTTCTCAGTCAAATCTCAAGCGGATAGAGAATT...ATTTACAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATAATTCTCTATCCGCTTaGGATTTGACTGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHNSLSA*DLTEKS
Trigger: GGATTTCTCAGTCAAATCTCAAGCGGATAGAGAATT...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATTTTGTTTTGCTTTCCTaGGTTCTTCTCTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHFVLLS*VLLSLP
Trigger: TGGAAGTGAGAGAAGAACTCAGGAAAGCAAAACAAA...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATAACTGTGGCCATTTATaGTTAAGGCATAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHNCGHL*LRHNLL
Trigger: CAGGAGATTATGCCTTAATCATAAATGGCCACAGTT...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATCTAGGAGATCATTCTTaGCATCACTTTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNLGDHS*HHFLGH
Trigger: ATGCCCTAGAAAGTGATGTCAAGAATGATCTCCTAG...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR TCA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAATTTCAGCTCCACCTaGAGTGAAAAGATAACTACG +
Preference number: 4 (lower is better)
Translates to: WERLILQIHVYLSIGMLFNFSST*SEKITT
Trigger: CGTAGTTATCTTTTCACTTCAGGTGGAGCTGAAATT...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGAATTTCAGCTCCACCTaGAGTGAAAAGATAACTACG +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLNFSST*SEKITT
Trigger: CGTAGTTATCTTTTCACTTCAGGTGGAGCTGAAATT...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR TCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGGATTCATATGTGGACTaGAATTTGAGCTGCAACATC +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLDSYVD*NLSCNI
Trigger: GATGTTGCAGCTCAAATTTCAGTCCACATATGAATC...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAAAGATTTCTCAGCAGTaGAGGAAGATCAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLKISQQ*RKIKQV
Trigger: TACCTGTTTGATCTTCCTGCACTGCTGAGAAATCTT...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR GCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGTTCCTAGTCTGCTCTTaGTGGTCTCTTTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLFLVCS*WSLSHF
Trigger: AAAATGAGAAAGAGACCAGCAAGAGCAGACTAGGAA...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559829.5
CDS-3UTR CCA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCTTATATTTCGATGTGTaGATACGATTATCCGCATAC +
Preference number: 4 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISLYFDV*IRLSAY
Trigger: GTATGCGGATAATCGTATCCACACATCGAAATATAA...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATTCTTCTATTGTTATaGTCTCTGGGGTCCGGGATT +
Preference number: 4 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNILLLL*SLGSGI
Trigger: AATCCCGGACCCCAGAGACCATAACAATAGAAGAAT...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATGCAAATTCACTGAGGTaGTCTGACGTCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNANSLR*SDVKDK
Trigger: TTTGTCTTTGACGTCAGACCACCTCAGTGAATTTGC...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACTATCTTCTACAGCAGTaGCACCTAGTAGCATCAAAT +
Preference number: 4 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHYLLQQ*HLVASN
Trigger: ATTTGATGCTACTAGGTGCCACTGCTGTAGAAGATA...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAAATGGAAACTGGTTTaGGAAGATGCCAAAGATGCC +
Preference number: 4 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNKWKLV*EDAKDA
Trigger: GGCATCTTTGGCATCTTCCCAAACCAGTTTCCATTT...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATCCAACAAATGGAAACTaGTTTGGGAAGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNPTNGN*FGKMPK
Trigger: CTTTGGCATCTTCCCAAACCAGTTTCCATTTGTTGG...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CCA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGTTTAAAAGTATACCTTaGGAAAGGCTGATCTTACAG +
Preference number: 4 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNEFKSIP*ERLILQ
Trigger: CTGTAAGATCAGCCTTTCCCAAGGTATACTTTTAAA...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
3UTR CAA 72 bp TCTTTCCAAGAAAGGATTCCCATGAATTTATCTAACTaGTTGTTAGGCACCTCACAGACAACAATCCCATCA +
Preference number: 4 (lower is better)
Translates to: SFQERIPMNLSN*LLGTSQTTIPS
Trigger: TGATGGGATTGTTGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATTCATGGGAATCCTTTCTTGGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATTGACTCTCCCAGATTaGATTTCCTATTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLLTLPD*ISYCKN
Trigger: ATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR TCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAACTGTGGCCATTTATaGTTAAGGCATAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNNCGHL*LRHNLL
Trigger: CAGGAGATTATGCCTTAATCATAAATGGCCACAGTT...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR GCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAAGATTTCTCAGCAGTaGAGGAAGATCAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNKISQQ*RKIKQV
Trigger: TACCTGTTTGATCTTCCTGCACTGCTGAGAAATCTT...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284509.11
CDS-3UTR GCA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATCACAGCATTATTCCCTaGTATCACAAACACATCATT +
Preference number: 4 (lower is better)
Translates to: FRILSGEPLSHFISMSLHHSIIP*YHKHII
Trigger: AATGATGTGTTTGTGATAGCAGGGAATAATGCTGTG...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACCACAGCATTATTCCCTaGTATCACAAACACATCATT +
Preference number: 4 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHHSIIP*YHKHII
Trigger: AATGATGTGTTTGTGATAGCAGGGAATAATGCTGTG...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR GCA 90 bp AATGGAAACTGGTTTGGGAAGATGCCAAAGATGCCATTACTGTGCATTGTAAATTTACAGTCTTACACATaGAAGCAAGTTCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: NGNWFGKMPKMPLLCIVNLQSYT*KQVLGD
Trigger: ATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAA...ATTTACAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR TCA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATTTGACTCTCCCAGATTaGATTTCCTATTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNLTLPD*ISYCKN
Trigger: ATTCTTGCAATAGGAAATTCAATCTGGGAGAGTCAA...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR GCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATTTAGTGTCAGGACCTaGAAAAATAACCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLFSVRT*KNNHSK
Trigger: TTTGGAATGGTTATTTTTGCAGGTCCTGACACTAAA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR GCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAGAGCAAGACATCTATTaGACTGCTGAAACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLEQDIY*TAETLK
Trigger: TTTTAAAGTTTCAGCAGTGCAATAGATGTCTTGCTC...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CCA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGTTATATTTCGATGTGTaGATACGATTATCCGCATAC +
Preference number: 4 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLLYFDV*IRLSAY
Trigger: GTATGCGGATAATCGTATCCACACATCGAAATATAA...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CCA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATTATATTTCGATGTGTaGATACGATTATCCGCATAC +
Preference number: 4 (lower is better)
Translates to: VPFVTDVADHKQLRARHLLYFDV*IRLSAY
Trigger: GTATGCGGATAATCGTATCCACACATCGAAATATAA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CCA 90 bp AATGGAAACTGGTTTGGGAAGATGCCAAAGATGCCATTACTGTGCATTGTAAATTTTAAAAGTATACCTTaGGAAAGGCTGATCTTACAG +
Preference number: 4 (lower is better)
Translates to: NGNWFGKMPKMPLLCIVNFKSIP*ERLILQ
Trigger: CTGTAAGATCAGCCTTTCCCAAGGTATACTTTTAAA...ATTTACAATGCACAGTAATGGCATCTTTGGCATCTTCCCAAACCAGTTTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CCA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATTTATATTTCGATGTGTaGATACGATTATCCGCATAC +
Preference number: 4 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNLYFDV*IRLSAY
Trigger: GTATGCGGATAATCGTATCCACACATCGAAATATAA...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
3UTR CAA 72 bp GGATTTTTGAGATCCTGTAGTGGTCTAGCATCTTATTaGACACATGGACAAACCAAAGACAAAGAAGATAAA +
Preference number: 4 (lower is better)
Translates to: GFLRSCSGLASY*THGQTKDKEDK
Trigger: TTTATCTTCTTTGTCTTTGGTTTGTCCATGTGTCAAATAAGATGCTAGACCACTACAGGATCTCAAAAATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS GCA 90 bp CGGCGCAGCCCGCCAGTCCGCCCGGAGCCCGCCCAGTCGCCGCGCTaGACGCCCGGGGTGAACCCTCTGCCCTCGCTGGGACAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: RRSPPVRPEPAQSPR*TPGVNPLPSLGQRA
Trigger: GGCCCTCTGTCCCAGCGAGGGCAGAGGGTTCACCCCGGGCGTGCAGCGCGGCGACTGGGCGGGCTCCGGGCGGACTGGCGGGCTGCGCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS GCA 90 bp CTCTGTCTTCCCCTTCATCTCACGCGAGCCCGGCGTCCCGCCGCGTaGGCCCCGGCGCAGCCCGCCAGTCCGCCCGGAGCCCGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: LCLPLHLTRARRPAA*APAQPASPPGARPV
Trigger: GACTGGGCGGGCTCCGGGCGGACTGGCGGGCTGCGCCGGGGCGCACGCGGCGGGACGCCGGGCTCGCGTGAGATGAAGGGGAAGACAGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS GCA 90 bp CCTACGCGCAGGTGGACCGGCGCAGCAATCAAGTGGCCCGGGCGCTaGACGACCACCTCGGCCTGCGCCAGGGAGACTGCGTGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: PTRRWTGAAIKWPGR*TTTSACARETAWRS
Trigger: GGAGCGCCACGCAGTCTCCCTGGCGCAGGCCGAGGTGGTCGTGCAGCGCCCGGGCCACTTGATTGCTGCGCCGGTCCACCTGCGCGTAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS GCA 90 bp GTGGCCCGGGCGCTGCACGACCACCTCGGCCTGCGCCAGGGAGACTaGGTGGCGCTCCTTATGGGTAACGAGCCGGCCTACGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: VARALHDHLGLRQGD*VALLMGNEPAYVWL
Trigger: CAGCCACACGTAGGCCGGCTCGTTACCCATAAGGAGCGCCACGCAGTCTCCCTGGCGCAGGCCGAGGTGGTCGTGCAGCGCCCGGGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS CCA 90 bp CCCGGGCGCTGCACGACCACCTCGGCCTGCGCCAGGGAGACTGCGTaGCGCTCCTTATGGGTAACGAGCCGGCCTACGTGTGGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: PGRCTTTSACARETA*RSLWVTSRPTCGCG
Trigger: GCCACAGCCACACGTAGGCCGGCTCGTTACCCATAAGGAGCGCCACGCAGTCTCCCTGGCGCAGGCCGAGGTGGTCGTGCAGCGCCCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS GCA 90 bp GGCGCAGCAATCAAGTGGCCCGGGCGCTGCACGACCACCTCGGCCTaGGCCAGGGAGACTGCGTGGCGCTCCTTATGGGTAACGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GAAIKWPGRCTTTSA*ARETAWRSLWVTSR
Trigger: CCGGCTCGTTACCCATAAGGAGCGCCACGCAGTCTCCCTGGCGCAGGCCGAGGTGGTCGTGCAGCGCCCGGGCCACTTGATTGCTGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS CCA 90 bp ACGAGACTCTCACCTACGCGCAGGTGGACCGGCGCAGCAATCAAGTaGCCCGGGCGCTGCACGACCACCTCGGCCTGCGCCAGGGAGACT +
Preference number: 5 (lower is better)
Translates to: TRLSPTRRWTGAAIK*PGRCTTTSACARET
Trigger: AGTCTCCCTGGCGCAGGCCGAGGTGGTCGTGCAGCGCCCGGGCCACTTGATTGCTGCGCCGGTCCACCTGCGCGTAGGTGAGAGTCTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS CCA 90 bp AGCCTTTTCTGCTCTTCCGCGACGAGACTCTCACCTACGCGCAGGTaGACCGGCGCAGCAATCAAGTGGCCCGGGCGCTGCACGACCACC +
Preference number: 5 (lower is better)
Translates to: SLFCSSATRLSPTRR*TGAAIKWPGRCTTT
Trigger: GGTGGTCGTGCAGCGCCCGGGCCACTTGATTGCTGCGCCGGTCCACCTGCGCGTAGGTGAGAGTCTCGTCGCGGAAGAGCAGAAAAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS-3UTR CAA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCGAGGCCTTCGGCTACTaGGAGGCCTTGCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEAEAFGY*EALPSF
Trigger: AAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTC...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCACAGACCTTCTTGAGCTaGACCTGCGGGTCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: PHLLPQISNSGASRISAPQTFLS*TCGSEA
Trigger: GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTG...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGGATGGGCACTGGCAGTaGTCTGCCGCAGATTTAAGT +
Preference number: 5 (lower is better)
Translates to: SATWRPCLLLSLLPPADLDGHWQ*SAADLS
Trigger: ACTTAAATCTGCGGCAGACAACTGCCAGTGCCCATC...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp CTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGGCTACTTGGAGGCCTTGCCTTCTTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LELDLRVRGLRLLGGLAFLLREC*LSFQER
Trigger: CCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAA...GAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTCGGACCCGCAGGTCAAGCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACCACCAGCTCTACCACTaGGGCTTTCTGGAGTGGAGT +
Preference number: 5 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHHQLYH*GFLEWS
Trigger: ACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTG...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTGAGGCCTTCGGCTACTaGGAGGCCTTGCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCEAFGY*EALPSF
Trigger: AAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTC...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACCAGACCTTCTTGAGCTaGACCTGCGGGTCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: ENYKPDALLGQGMSCITNQTFLS*TCGSEA
Trigger: GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTG...GTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGATGGGCACTGGCAGTaGTCTGCCGCAGATTTAAGT +
Preference number: 5 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPDGHWQ*SAADLS
Trigger: ACTTAAATCTGCGGCAGACAACTGCCAGTGCCCATC...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCTGCAGTTTGCTGTaGATGAGCACTTCAGACTGC +
Preference number: 5 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEAFCSLL*MSTSDC
Trigger: GCAGTCTGAAGTGCTCATCAACAGCAAACTGCAGAA...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557955.5
CDS-3UTR CAA 90 bp GTAGTCAGCAATATGTTGCCCATCTTCTCCAGCCACGTTGTAAAAGGCCCCATATGCCCCAGTTCCTCATaGAGCGTGGTCGTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: VVSNMLPIFSSHVVKGPICPSSS*SVVVRA
Trigger: GGCTCGAACGACCACGCTCAATGAGGAACTGGGGCA...TATGGGGCCTTTTACAACGTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TCGGCTACTTGGAGGCCTTGCCTTCTTTTGAGCCTTCTGCCACCGGCGGATCTGTTCCCAATTCTTCTATaGTTATGGTCTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SATWRPCLLLSLLPPADLFPILL*LWSLGS
Trigger: GGACCCCAGAGACCATAACAATAGAAGAATTGGGAA...CAGATCCGCCGGTGGCAGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCGTAGTCAGCAATATGTaGCCCATCTTCTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFVVSNM*PIFSSH
Trigger: GTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGCATATCCAGACCTTCTaGAGCTTGACCTGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIAHIQTF*SLTCGS
Trigger: GGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATG...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACGATGGGCACTGGCAGTaGTCTGCCGCAGATTTAAGT +
Preference number: 5 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHDGHWQ*SAADLS
Trigger: ACTTAAATCTGCGGCAGACAACTGCCAGTGCCCATC...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCCAGGGCCTTGGTGTTaGAGTAACGGCAATAAGTCA +
Preference number: 5 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQIPGPWC*SNGNKS
Trigger: TGACTTATTGCCGTTACTCAAACACCAAGGCCCTGG...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558458.1
CDS-3UTR CAA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGAGGAAAGTTCTGAATaGGTCCCCAGTTTGACTCTC +
Preference number: 5 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPEESSE*VPSLTL
Trigger: GAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTC...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACGTAGTCAGCAATATGTaGCCCATCTTCTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHVVSNM*PIFSSH
Trigger: GTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACCATATCCAGACCTTCTaGAGCTTGACCTGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHHIQTF*SLTCGS
Trigger: GGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATG...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGACATATCCAGACCTTCTaGAGCTTGACCTGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: LSEAICLPHLLPQISNSGHIQTF*SLTCGS
Trigger: GGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATG...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTAGGCTTGGAAGCCATTaGTTGTCCTGGCTGAACAGA +
Preference number: 5 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCRLGSH*LSWLNR
Trigger: TCTGTTCAGCCAGGACAACAAATGGCTTCCAAGCCT...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCCTTCAGCACTTGCTGTaGATGAGCACTTCAGACTGC +
Preference number: 5 (lower is better)
Translates to: APPLASNLKLWSQQNFSSLQHLL*MSTSDC
Trigger: GCAGTCTGAAGTGCTCATCAACAGCAAGTGCTGAAG...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTATATTCACGGTCATaGGCTTTCACTATCCGTTCC +
Preference number: 5 (lower is better)
Translates to: GEQKHIQTFLSLTCGSEALYSRS*AFTIRS
Trigger: GGAACGGATAGTGAAAGCCAATGACCGTGAATATAA...GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTGCCCCAGTTCCTCATaGAGCGTGGTCGTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKCPSSS*SVVVRA
Trigger: GGCTCGAACGACCACGCTCAATGAGGAACTGGGGCA...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp ATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCTTCCCAATTCTTCTATaGTTATGGTCTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: IQVSVCDGQGPKAFPCKFFPILL*LWSLGS
Trigger: GGACCCCAGAGACCATAACAATAGAAGAATTGGGAA...GAATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558458.1
ENST00000559726.5
CDS-3UTR CAA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCACAAATGGAAACTGGTTaGGGAAGATGCCAAAGATGC +
Preference number: 5 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPQMETG*GRCQRC
Trigger: GCATCTTTGGCATCTTCCCAAACCAGTTTCCATTTG...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGACAAATGGAAACTGGTTaGGGAAGATGCCAAAGATGC +
Preference number: 5 (lower is better)
Translates to: AICLPHLLPQISNSGASRQMETG*GRCQRC
Trigger: GCATCTTTGGCATCTTCCCAAACCAGTTTCCATTTG...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTCTCTCCATAGCCTTCTaGGTGAGCAAAAGCATATCC +
Preference number: 5 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCLSIAF*VSKSIS
Trigger: GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAG...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTGTAACAGCGAGTGTTTaGTCCACCAAATCACAAACC +
Preference number: 5 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQIVTASV*STKSQT
Trigger: GGTTTGTGATTTGGTGGACAAAACACTCGCTGTTAC...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCTTGTACCTTCAGCACTaGCTGTTGATGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: IQVSVCDGQGPKAFPCKFLYLQH*LLMSTS
Trigger: TGAAGTGCTCATCAACAGCAAGTGCTGAAGGTACAA...GAATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGATTATATTCACGGTCATaGGCTTTCACTATCCGTTCC +
Preference number: 5 (lower is better)
Translates to: AICLPHLLPQISNSGASRLYSRS*AFTIRS
Trigger: GGAACGGATAGTGAAAGCCAATGACCGTGAATATAA...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGACATGTGGCTCACTACTaGATAGGAGAAGTAAATCAG +
Preference number: 5 (lower is better)
Translates to: AICLPHLLPQISNSGASRHVAHY*IGEVNQ
Trigger: CTGATTTACTTCTCCTATCAAGTAGTGAGCCACATG...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CTGGTTTGTAGAGCTGGGGACAGTCCACGCTGTTCTGGTCACTCACATCCTGGTCATGTGGCTCACTACTaGATAGGAGAAGTAAATCAG +
Preference number: 5 (lower is better)
Translates to: LVCRAGDSPRCSGHSHPGHVAHY*IGEVNQ
Trigger: CTGATTTACTTCTCCTATCAAGTAGTGAGCCACATG...ACCAGGATGTGAGTGACCAGAACAGCGTGGACTGTCCCCAGCTCTACAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAAGGATTATCTTCTCATaGTTGAGGGAATGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AICLPHLLPQISNSGASRRIIFS*LRECLL
Trigger: CAGCAAGCATTCCCTCAACAATGAGAAGATAATCCT...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAGAGCCACTGCAGGTATaGCTTTTCGAGAATAATACA +
Preference number: 5 (lower is better)
Translates to: AICLPHLLPQISNSGASREPLQV*LFENNT
Trigger: TGTATTATTCTCGAAAAGCAATACCTGCAGTGGCTC...TCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGGCTACTTGGAGGCCTaGCCTTCTTTTGAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: WAFWSGVTLQQITVLHMQGYLEA*PSFEPS
Trigger: AGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCC...TTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ACAATCATCAACCAACCACATGAGGTAGGTAGTATGTCCTCATTTTACAGAGGACAGACCTTCTTGAGCTaGACCTGCGGGTCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: TIINQPHEVGSMSSFYRGQTFLS*TCGSEA
Trigger: GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTG...TCCTCTGTAAAATGAGGACATACTACCTACCTCATGTGGTTGGTTGATGATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGCTCTCCATAGCCTTCTaGGTGAGCAAAAGCATATCC +
Preference number: 5 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIALSIAF*VSKSIS
Trigger: GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAG...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TCTGGCCTGGTTTTCCATAGCGCACACTCCTGTTTGATGGGCACTGGCAGTTGTGTAACAGCGAGTGTTTaGTCCACCAAATCACAAACC +
Preference number: 5 (lower is better)
Translates to: SGLVFHSAHSCLMGTGSCVTASV*STKSQT
Trigger: GGTTTGTGATTTGGTGGACAAAACACTCGCTGTTAC...ACAACTGCCAGTGCCCATCAAACAGGAGTGTGCGCTATGGAAAACCAGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGATGTTCAGTCTCCTTaGTCCCTAGACTGGTATAAA +
Preference number: 5 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPDVQSP*SLDWYK
Trigger: TTTATACCAGTCTAGGGACAAAGGAGACTGAACATC...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp AGTCTCAGTTCTCTCCCAGTTCCCCATCTAGTGCCCTTACACTGGAGCTACCTTTACACTGGAGCTACCTaGATTCCACGCACAGAGTAT +
Preference number: 5 (lower is better)
Translates to: SLSSLPVPHLVPLHWSYLYTGAT*IPRTEY
Trigger: ATACTCTGTGCGTGGAATCAAGGTAGCTCCAGTGTA...AAGGTAGCTCCAGTGTAAGGGCACTAGATGGGGAACTGGGAGAGAACTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR CAA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACCATGTGGCTCACTACTaGATAGGAGAAGTAAATCAG +
Preference number: 5 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHHVAHY*IGEVNQ
Trigger: CTGATTTACTTCTCCTATCAAGTAGTGAGCCACATG...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACGAGCCACTGCAGGTATaGCTTTTCGAGAATAATACA +
Preference number: 5 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHEPLQV*LFENNT
Trigger: TGTATTATTCTCGAAAAGCAATACCTGCAGTGGCTC...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CAGAATAGTATCTGCTCCTTTGGAATAAAGCTTTATCTGTCCTTCTGGGTTTCGTGCCCCAGTTCCTCATaGAGCGTGGTCGTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: QNSICSFGIKLYLSFWVSCPSSS*SVVVRA
Trigger: GGCTCGAACGACCACGCTCAATGAGGAACTGGGGCA...CGAAACCCAGAAGGACAGATAAAGCTTTATTCCAAAGGAGCAGATACTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ACAATCATCAACCAACCACATGAGGTAGGTAGTATGTCCTCATTTTACAGAGGATGCCCCAGTTCCTCATaGAGCGTGGTCGTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: TIINQPHEVGSMSSFYRGCPSSS*SVVVRA
Trigger: GGCTCGAACGACCACGCTCAATGAGGAACTGGGGCA...TCCTCTGTAAAATGAGGACATACTACCTACCTCATGTGGTTGGTTGATGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp CATCCAGGTCTCTGTATGCGATGGCCAAGGTCCGAAGGCCTTCCCCTGCAAATTCACTCTTTAAAGTACTaGTCATCCAGGTCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: HPGLCMRWPRSEGLPLQIHSLKY*SSRSLY
Trigger: ATACAGAGACCTGGATGACAAGTACTTTAAAGAGTG...AATTTGCAGGGGAAGGCCTTCGGACCTTGGCCATCGCATACAGAGACCTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558458.1
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCCACTCTTTAAAGTACTaGTCATCCAGGTCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFHSLKY*SSRSLY
Trigger: ATACAGAGACCTGGATGACAAGTACTTTAAAGAGTG...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCACACTCTTTAAAGTACTaGTCATCCAGGTCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPHSLKY*SSRSLY
Trigger: ATACAGAGACCTGGATGACAAGTACTTTAAAGAGTG...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATCACCAGCTCTACCACTaGGGCTTTCTGGAGTGGAGT +
Preference number: 5 (lower is better)
Translates to: LLRELQARCTSGSGNVVHHQLYH*GFLEWS
Trigger: ACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTG...ATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTCACCAGCTCTACCACTaGGGCTTTCTGGAGTGGAGT +
Preference number: 5 (lower is better)
Translates to: APFYPPEDPFSEYAALQVHQLYH*GFLEWS
Trigger: ACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTG...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTGAGGCCTTCGGCTACTaGGAGGCCTTGCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: APFYPPEDPFSEYAALQVEAFGY*EALPSF
Trigger: AAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTC...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGCAGACCTTCTTGAGCTaGACCTGCGGGTCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLQTFLS*TCGSEA
Trigger: GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTG...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACGATGGGCACTGGCAGTaGTCTGCCGCAGATTTAAGT +
Preference number: 5 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDDGHWQ*SAADLS
Trigger: ACTTAAATCTGCGGCAGACAACTGCCAGTGCCCATC...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCTTGTATTCTTCAGGCTaGGAAGCCATTTGTTGTCCT +
Preference number: 5 (lower is better)
Translates to: APPLASNLKLWSQQNFSSLYSSG*EAICCP
Trigger: AGGACAACAAATGGCTTCCAAGCCTGAAGAATACAA...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GGCACCAAGTGTTGGAGAACAGGCAAATCAATAGGTGCTTTGCCTGCAAGAATCTACCAAATGCCCCTGTaGATGGAACATGGCACCAAG +
Preference number: 5 (lower is better)
Translates to: GTKCWRTGKSIGALPARIYQMPL*MEHGTK
Trigger: CTTGGTGCCATGTTCCATCAACAGGGGCATTTGGTA...GATTCTTGCAGGCAAAGCACCTATTGATTTGCCTGTTCTCCAACACTTGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR CAA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGATTAAACCCTCAGCTTaGTACCTTCAGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGIKPSA*YLQHLL
Trigger: CAGCAAGTGCTGAAGGTACAAAGCTGAGGGTTTAAT...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS GCA 90 bp TCACAGACAGGTGGTGTGCCTTACAGCTGGGTTCAACCATCAAGCTaGTCATGTCTTTGGGGCAATTATTGTTCTCCCTTGTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SQTGGVPYSWVQPSS*SCLWGNYCSPLLFS
Trigger: AGAGAACAACAAGGGAGAACAATAATTGCCCCAAAGACATGAGCAGCTTGATGGTTGAACCCAGCTGTAAGGCACACCACCTGTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS-3UTR CAA 90 bp GTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAAATTTATCTAACTTGTaGTTAGGCACCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: VRQSACPTSCLKSQTLEPNLSNL*LGTSQT
Trigger: TGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATT...TGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTCCGAGGCCTTCATGAATTTATCTAACTaGTTGTTAGGCACCTCACAG +
Preference number: 5 (lower is better)
Translates to: EQKHIQTFLSLTCGSEAFMNLSN*LLGTSQ
Trigger: CTGTGAGGTGCCTAACAACAAGTTAGATAAATTCAT...GAAGGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp CTGGCAGTTGTCTGCCGCAGATTTAAGTTAAGTGAGGCAATCTGCCTGCCCCACATTATCTTCTCATTGTaGAGGGAATGCTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LAVVCRRFKLSEAICLPHIIFSL*RECLLS
Trigger: AGACAGCAAGCATTCCCTCAACAATGAGAAGATAAT...GTGGGGCAGGCAGATTGCCTCACTTAACTTAAATCTGCGGCAGACAACTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGAGGAAAGTTCTGAATaGGTCCCCAGTTTGACTCTC +
Preference number: 5 (lower is better)
Translates to: WAFWSGVTLQQITVLHMQEESSE*VPSLTL
Trigger: GAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTC...TTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGGAGCCACTGCAGGTATaGCTTTTCGAGAATAATACA +
Preference number: 5 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGEPLQV*LFENNT
Trigger: TGTATTATTCTCGAAAAGCAATACCTGCAGTGGCTC...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACTGCCCCAGTTCCTCATaGAGCGTGGTCGTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHCPSSS*SVVVRA
Trigger: GGCTCGAACGACCACGCTCAATGAGGAACTGGGGCA...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCGTGAGGGTACCCGTTTaGTCGGAGAAAATGTACTCA +
Preference number: 5 (lower is better)
Translates to: LEWSDPAANYSLTHASKFVRVPV*SEKMYS
Trigger: TGAGTACATTTTCTCCGACAAAACGGGTACCCTCAC...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGACAAATGGAAACTGGTTaGGGAAGATGCCAAAGATGC +
Preference number: 5 (lower is better)
Translates to: LSEAICLPHLLPQISNSGQMETG*GRCQRC
Trigger: GCATCTTTGGCATCTTCCCAAACCAGTTTCCATTTG...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp ACCACTTGGGCTTTCTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACTCTGATCACTCAGGGTaGGGTATAAATCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: TTWAFWSGVTLQQITVLHSDHSG*GINPPS
Trigger: TGAAGGTGGATTTATACCCAACCCTGAGTGATCAGA...GTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAGAAAGCCCAAGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATGGCTACTTGGAGGCCTaGCCTTCTTTTGAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: LLRELQARCTSGSGNVVHGYLEA*PSFEPS
Trigger: AGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCC...ATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATCAGACCTTCTTGAGCTaGACCTGCGGGTCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNQTFLS*TCGSEA
Trigger: GGCCTCGGACCCGCAGGTCAAGCTCAAGAAGGTCTG...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp ACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCTAGGAGATCATTCCATATCCAGACCTTCTaGAGCTTGACCTGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: TLQQITVLHMQASSRRSFHIQTF*SLTCGS
Trigger: GGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATG...GAATGATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp CAGCAGTTTCAACATAACAGAGACCATGTGGCTCACTACTTGATAGGAGAAGTACATATCCAGACCTTCTaGAGCTTGACCTGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: QQFQHNRDHVAHYLIGEVHIQTF*SLTCGS
Trigger: GGACCCGCAGGTCAAGCTCAAGAAGGTCTGGATATG...TACTTCTCCTATCAAGTAGTGAGCCACATGGTCTCTGTTATGTTGAAACTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGTAACAGCGAGTGTTTaGTCCACCAAATCACAAACC +
Preference number: 5 (lower is better)
Translates to: LSEAICLPHLLPQISNSGVTASV*STKSQT
Trigger: GGTTTGTGATTTGGTGGACAAAACACTCGCTGTTAC...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS TCA 90 bp AGCAGAGCAGCTGACACAAATCTTCAACTCATTGATGATGGCATCTaGCTGATGGCTTGTGTTCCTGCCCAAGCTATTCTTCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: SRAADTNLQLIDDGI*LMACVPAQAILHFW
Trigger: CCAGAAGTGAAGAATAGCTTGGGCAGGAACACAAGCCATCAGTCAGATGCCATCATCAATGAGTTGAAGATTTGTGTCAGCTGCTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560161.1
CDS TCA 90 bp TTCCACTTCACGCAATTTCTTTTCACTGCAGAACATTATTATACCTaGTCTTTCACCAGGTCTCAACAGGTGGCCTACCTGCAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: FHFTQFLFTAEHYYT*SFTRSQQVAYLQRR
Trigger: CCTCCGCTGCAGGTAGGCCACCTGTTGAGACCTGGTGAAAGATCAGGTATAATAATGTTCTGCAGTGAAAAGAAATTGCGTGAAGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS TCA 90 bp TTCCACTTCACGCAATTTCTTTTCACTGCAGAACATTATTATACCTaGTCTTTCACCAGGTCTCAACAGGTGGCCTACCTGCAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: FHFTQFLFTAEHYYT*SFTRSQQVAYLQPQ
Trigger: CTGGGGCTGCAGGTAGGCCACCTGTTGAGACCTGGTGAAAGATCAGGTATAATAATGTTCTGCAGTGAAAAGAAATTGCGTGAAGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559726.5
CDS GCA 90 bp CCTGTTGTCTCCTCTGCTGGGATGTCCATCCTCTTACTTCTCATCTaGTTCAATATGTTTGATCCTGGGCTGAGAAACCACAGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: PVVSSAGMSILLLLI*FNMFDPGLRNHRRN
Trigger: GTTTCTTCTGTGGTTTCTCAGCCCAGGATCAAACATATTGAAGCAGATGAGAAGTAAGAGGATGGACATCCCAGCAGAGGAGACAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560161.1
CDS GCA 90 bp GGGCATGAGCCTGAGTTCTTCTCTCACTTCCACAGCATTATTCCCTaGTATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCA +
Preference number: 5 (lower is better)
Translates to: GHEPEFFSHFHSIIP*YHKHIIHVVSQHVA
Trigger: TGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATAGCAGGGAATAATGCTGTGGAAGTGAGAGAAGAACTCAGGCTCATGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559998.1
CDS-3UTR CAA 90 bp AGCCTTCTTGGTGAGCAAAAGCATATCCAGACCTTCTTGAGCTTGACCTGCGGGTTTTCATTCTGCAGTTaGCTGTTGATGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: SLLGEQKHIQTFLSLTCGFSFCS*LLMSTS
Trigger: TGAAGTGCTCATCAACAGCAAACTGCAGAATGAAAA...CCCGCAGGTCAAGCTCAAGAAGGTCTGGATATGCTTTTGCTCACCAAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557955.5
CDS-3UTR CAA 90 bp GCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCATGAATTTATCTAACTaGTTGTTAGGCACCTCACAG +
Preference number: 5 (lower is better)
Translates to: APPLASNLKLWSQQNFSSMNLSN*LLGTSQ
Trigger: CTGTGAGGTGCCTAACAACAAGTTAGATAAATTCAT...GGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAATTATCTTCTCATTGTaGAGGGAATGCTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PHLLPQISNSGASRISAPIIFSL*RECLLS
Trigger: AGACAGCAAGCATTCCCTCAACAATGAGAAGATAAT...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGACACAGACGTGAGGGTACCCGTTTaGTCGGAGAAAATGTACTCA +
Preference number: 5 (lower is better)
Translates to: LSGEPLSHFISMSLHDTDVRVPV*SEKMYS
Trigger: TGAGTACATTTTCTCCGACAAAACGGGTACCCTCAC...GTCTGTGTCATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TGTCCACCAAATCACAAACCAGACAGTGACCCTCTGGCCTGGTTTTCCATAGCGCACTCTTTAAAGTACTaGTCATCCAGGTCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: CPPNHKPDSDPLAWFSIAHSLKY*SSRSLY
Trigger: ATACAGAGACCTGGATGACAAGTACTTTAAAGAGTG...CGCTATGGAAAACCAGGCCAGAGGGTCACTGTCTGGTTTGTGATTTGGTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGGTAGTCAGCAATATGTaGCCCATCTTCTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEVVSNM*PIFSSH
Trigger: GTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GTAGTCAGCAATATGTTGCCCATCTTCTCCAGCCACGTTGTAAAAGGCCCCATACAAATGGAAACTGGTTaGGGAAGATGCCAAAGATGC +
Preference number: 5 (lower is better)
Translates to: VVSNMLPIFSSHVVKGPIQMETG*GRCQRC
Trigger: GCATCTTTGGCATCTTCCCAAACCAGTTTCCATTTG...TATGGGGCCTTTTACAACGTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGGGCTACTTGGAGGCCTaGCCTTCTTTTGAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNEGYLEA*PSFEPS
Trigger: AGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCC...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACGAGGCCTTCGGCTACTaGGAGGCCTTGCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDEAFGY*EALPSF
Trigger: AAAAGAAGGCAAGGCCTCCAAGTAGCCGAAGGCCTC...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp TTCATCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCGTAACAGCGAGTGTTTaGTCCACCAAATCACAAACC +
Preference number: 5 (lower is better)
Translates to: FIPLFCGSIRIFKHLMPLVTASV*STKSQT
Trigger: GGTTTGTGATTTGGTGGACAAAACACTCGCTGTTAC...GAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAAACACAAGCACACTTTaGTATTCTTCAGGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: PHLLPQISNSGASRISAPNTSTL*YSSGLE
Trigger: TTCCAAGCCTGAAGAATACAAAAGTGTGCTTGTGTT...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TTAAGTGAGGCAATCTGCCTGCCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGATGTTCAGTCTCCTTaGTCCCTAGACTGGTATAAA +
Preference number: 5 (lower is better)
Translates to: LSEAICLPHLLPQISNSGDVQSP*SLDWYK
Trigger: TTTATACCAGTCTAGGGACAAAGGAGACTGAACATC...TCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGGCAGGCAGATTGCCTCACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GTAGTCAGCAATATGTTGCCCATCTTCTCCAGCCACGTTGTAAAAGGCCCCATATTGTACCTTCAGCACTaGCTGTTGATGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: VVSNMLPIFSSHVVKGPILYLQH*LLMSTS
Trigger: TGAAGTGCTCATCAACAGCAAGTGCTGAAGGTACAA...TATGGGGCCTTTTACAACGTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS TCA 90 bp GAGCAGCTGACACAAATCTTCAACTCATTGATGATGGCATCTGACTaGTGGCTTGTGTTCCTGCCCAAGCTATTCTTCACTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: EQLTQIFNSLMMASD*WLVFLPKLFFTSGT
Trigger: AGTTCCAGAAGTGAAGAATAGCTTGGGCAGGAACACAAGCCATCAGTCAGATGCCATCATCAATGAGTTGAAGATTTGTGTCAGCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560161.1
CDS-3UTR CAA 90 bp CCCCACCTCTTGCCTCAAATCTCAAACTCTGGAGCCAGCAGAATTTCAGCTCCAAATTTATCTAACTTGTaGTTAGGCACCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: PHLLPQISNSGASRISAPNLSNL*LGTSQT
Trigger: TGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATT...TGGAGCTGAAATTCTGCTGGCTCCAGAGTTTGAGATTTGAGGCAAGAGGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTGTGAGGGTACCCGTTTaGTCGGAGAAAATGTACTCA +
Preference number: 5 (lower is better)
Translates to: APFYPPEDPFSEYAALQVVRVPV*SEKMYS
Trigger: TGAGTACATTTTCTCCGACAAAACGGGTACCCTCAC...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACAACAAGGAGAAGCCTTaGGAGATATCTAAACTGTGC +
Preference number: 5 (lower is better)
Translates to: ENYKPDALLGQGMSCITNNKEKP*EISKLC
Trigger: GCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGTT...GTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATCTCTCCATAGCCTTCTaGGTGAGCAAAAGCATATCC +
Preference number: 5 (lower is better)
Translates to: LLRELQARCTSGSGNVVHLSIAF*VSKSIS
Trigger: GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAG...ATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAGGCTTGGAAGCCATTaGTTGTCCTGGCTGAACAGA +
Preference number: 5 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNERLGSH*LSWLNR
Trigger: TCTGTTCAGCCAGGACAACAAATGGCTTCCAAGCCT...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp ACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATATCCTTCAGCACTTGCTGTaGATGAGCACTTCAGACTGC +
Preference number: 5 (lower is better)
Translates to: TFGNKTTFHEQGEAFGDILQHLL*MSTSDC
Trigger: GCAGTCTGAAGTGCTCATCAACAGCAAGTGCTGAAG...GATATCTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS TCA 90 bp TTCCACTTCACGCAATTTCTTTTCACTGCAGAACATTATTATACCTaGTCTTTCACCAGGTCTCAACAGGTGGCCTACCTCAACCCAGAC +
Preference number: 5 (lower is better)
Translates to: FHFTQFLFTAEHYYT*SFTRSQQVAYLNPD
Trigger: GTCTGGGTTGAGGTAGGCCACCTGTTGAGACCTGGTGAAAGATCAGGTATAATAATGTTCTGCAGTGAAAAGAAATTGCGTGAAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000674213.1
CDS GCA 90 bp CCAAGCTATTCTTCACTTCTGGAACTTTCCTCCTGTTGTCTCCTCTaGTGGGATGTCCATCCTCTTACTTCTCATCTGCTTCAATATGTT +
Preference number: 5 (lower is better)
Translates to: PSYSSLLELSSCCLL*WDVHPLTSHLLQYV
Trigger: AACATATTGAAGCAGATGAGAAGTAAGAGGATGGACATCCCAGCAGAGGAGACAACAGGAGGAAAGTTCCAGAAGTGAAGAATAGCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560161.1
CDS CCA 90 bp ACAAACCTACAGAAGCTTCAACCACGACCAGAGAACTATCCAGCATaGGTCATAACTGGCATTTACAAAATGAGCACTCAGGAGAACATG +
Preference number: 5 (lower is better)
Translates to: TNLQKLQPRPENYPA*VITGIYKMSTQENM
Trigger: CATGTTCTCCTGAGTGCTCATTTTGTAAATGCCAGTTATGACCCATGCTGGATAGTTCTCTGGTCGTGGTTGAAGCTTCTGTAGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CCA 90 bp CTATGCACGCTAAAGCTTGAGAACCACTGGTCCAACCCAATTCACTaGCTTAAGAAAGAACACAGATGGTCAACTGGGACTAACAATAGA +
Preference number: 5 (lower is better)
Translates to: LCTLKLENHWSNPIH*LKKEHRWSTGTNNR
Trigger: TCTATTGTTAGTCCCAGTTGACCATCTGTGTTCTTTCTTAAGCCAGTGAATTGGGTTGGACCAGTGGTTCTCAAGCTTTAGCGTGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS-3UTR CAA 90 bp GGCACCAAGTGTTGGAGAACAGGCAAATCAATAGGTGCTTTGCCTGCAAGAATCTTTTCATTCTGCAGTTaGCTGTTGATGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: GTKCWRTGKSIGALPARIFSFCS*LLMSTS
Trigger: TGAAGTGCTCATCAACAGCAAACTGCAGAATGAAAA...GATTCTTGCAGGCAAAGCACCTATTGATTTGCCTGTTCTCCAACACTTGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR CAA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKLLREC*LSFQER
Trigger: CCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAA...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCGAGGAAAGTTCTGAATaGGTCCCCAGTTTGACTCTC +
Preference number: 5 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISEESSE*VPSLTL
Trigger: GAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTC...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp CTGGAGTGGAGTGACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCCACTCTTTAAAGTACTaGTCATCCAGGTCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: LEWSDPAANYSLTHASKFHSLKY*SSRSLY
Trigger: ATACAGAGACCTGGATGACAAGTACTTTAAAGAGTG...GAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGTCACTCCACTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATCACCAGCTCTACCACTaGGGCTTTCTGGAGTGGAGT +
Preference number: 5 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNHQLYH*GFLEWS
Trigger: ACTCCACTCCAGAAAGCCCAAGTGGTAGAGCTGGTG...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACTCTGATCACTCAGGGTaGGGTATAAATCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: DVINESPVTGIQGYLHTDSDHSG*GINPPS
Trigger: TGAAGGTGGATTTATACCCAACCCTGAGTGATCAGA...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTCTGATCACTCAGGGTaGGGTATAAATCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: APFYPPEDPFSEYAALQVSDHSG*GINPPS
Trigger: TGAAGGTGGATTTATACCCAACCCTGAGTGATCAGA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACGGCTACTTGGAGGCCTaGCCTTCTTTTGAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHGYLEA*PSFEPS
Trigger: AGAAGGCTCAAAAGAAGGCAAGGCCTCCAAGTAGCC...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGATGGGCACTGGCAGTaGTCTGCCGCAGATTTAAGT +
Preference number: 5 (lower is better)
Translates to: FRILSGEPLSHFISMSLHDGHWQ*SAADLS
Trigger: ACTTAAATCTGCGGCAGACAACTGCCAGTGCCCATC...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CCCTTACACTGGAGCTACCTTGATTCCACGCACAGAGTATGTTCTAACAGACACGGTCTAGCATCTTATTaGACACATGGACAAACCAAA +
Preference number: 5 (lower is better)
Translates to: PLHWSYLDSTHRVCSNRHGLASY*THGQTK
Trigger: TTTGGTTTGTCCATGTGTCAAATAAGATGCTAGACC...GTGTCTGTTAGAACATACTCTGTGCGTGGAATCAAGGTAGCTCCAGTGTAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS TCA 90 bp CTCACATCCCATGCATCTCTGCCATCTAAGAGGAAGATTGTATGGTaGCATAGCACACTTAGAAGTGGCATTCTACTGTTCTCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: LTSHASLPSKRKIVW*HSTLRSGILLFSPK
Trigger: TTTTGGAGAGAACAGTAGAATGCCACTTCTAAGTGTGCTATGTCACCATACAATCTTCCTCTTAGATGGCAGAGATGCATGGGATGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CCA 90 bp GGTGTGCCTTACAGCTGGGTTCAACCATCAAGCTGCTCATGTCTTTaGGGCAATTATTGTTCTCCCTTGTTGTTCTCTTTTAAAATGCAA +
Preference number: 5 (lower is better)
Translates to: GVPYSWVQPSSCSCL*GNYCSPLLFSFKMQ
Trigger: TTGCATTTTAAAAGAGAACAACAAGGGAGAACAATAATTGCCCCAAAGACATGAGCAGCTTGATGGTTGAACCCAGCTGTAAGGCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTTATATTCACGGTCATaGGCTTTCACTATCCGTTCC +
Preference number: 5 (lower is better)
Translates to: APFYPPEDPFSEYAALQVLYSRS*AFTIRS
Trigger: GGAACGGATAGTGAAAGCCAATGACCGTGAATATAA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TTGAGATCCTGTAGTGGTCTAGCATCTTATTTGACACATGGACAAACCAAAGACTTCTGCAGTTTGCTGTaGATGAGCACTTCAGACTGC +
Preference number: 5 (lower is better)
Translates to: LRSCSGLASYLTHGQTKDFCSLL*MSTSDC
Trigger: GCAGTCTGAAGTGCTCATCAACAGCAAACTGCAGAA...GTCTTTGGTTTGTCCATGTGTCAAATAAGATGCTAGACCACTACAGGATCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558024.1
CDS-3UTR CAA 90 bp TTCATCCCTCTCTTCTGTGGCAGCATTCGCATCTTCAAGCATCTTATGCCACTCAATTTATCTAACTTGTaGTTAGGCACCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: FIPLFCGSIRIFKHLMPLNLSNL*LGTSQT
Trigger: TGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATT...GAGTGGCATAAGATGCTTGAAGATGCGAATGCTGCCACAGAAGAGAGGGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp CAGCAGTTTCAACATAACAGAGACCATGTGGCTCACTACTTGATAGGAGAAGTATTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: QQFQHNRDHVAHYLIGEVLLREC*LSFQER
Trigger: CCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAA...TACTTCTCCTATCAAGTAGTGAGCCACATGGTCTCTGTTATGTTGAAACTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGAGGATTATCTTCTCATaGTTGAGGGAATGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKRIIFS*LRECLL
Trigger: CAGCAAGCATTCCCTCAACAATGAGAAGATAATCCT...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACAGGATTATCTTCTCATaGTTGAGGGAATGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: DVINESPVTGIQGYLHTDRIIFS*LRECLL
Trigger: CAGCAAGCATTCCCTCAACAATGAGAAGATAATCCT...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GACGTGATTAATGAAAGTCCAGTAACTGGTATCCAAGGCTATCTGCACACTGACGAGCCACTGCAGGTATaGCTTTTCGAGAATAATACA +
Preference number: 5 (lower is better)
Translates to: DVINESPVTGIQGYLHTDEPLQV*LFENNT
Trigger: TGTATTATTCTCGAAAAGCAATACCTGCAGTGGCTC...GTCAGTGTGCAGATAGCCTTGGATACCAGTTACTGGACTTTCATTAATCACGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TTTTCCAGATGTGATAAGCTCTCCATAGCCTTCTTGGTGAGCAAAAGCATATCCTTCCCAATTCTTCTATaGTTATGGTCTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: FSRCDKLSIAFLVSKSISFPILL*LWSLGS
Trigger: GGACCCCAGAGACCATAACAATAGAAGAATTGGGAA...GGATATGCTTTTGCTCACCAAGAAGGCTATGGAGAGCTTATCACATCTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTAACAAGGAGAAGCCTTaGGAGATATCTAAACTGTGC +
Preference number: 5 (lower is better)
Translates to: APFYPPEDPFSEYAALQVNKEKP*EISKLC
Trigger: GCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGTT...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp ATTACAAGCCAGATGCACTTCTGGGTCAGGGAATGTCGTGCATTACCAACAAATAACAAGGAGAAGCCTTaGGAGATATCTAAACTGTGC +
Preference number: 5 (lower is better)
Translates to: ITSQMHFWVRECRALPTNNKEKP*EISKLC
Trigger: GCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGTT...ATTTGTTGGTAATGCACGACATTCCCTGACCCAGAAGTGCATCTGGCTTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGAACAAGGAGAAGCCTTaGGAGATATCTAAACTGTGC +
Preference number: 5 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKNKEKP*EISKLC
Trigger: GCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGTT...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATGTAGTCAGCAATATGTaGCCCATCTTCTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: FRILSGEPLSHFISMSLHVVSNM*PIFSSH
Trigger: GTGGCTGGAGAAGATGGGCAACATATTGCTGACTAC...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp ACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATATCCAAATGGAAACTGGTTaGGGAAGATGCCAAAGATGC +
Preference number: 5 (lower is better)
Translates to: TFGNKTTFHEQGEAFGDIQMETG*GRCQRC
Trigger: GCATCTTTGGCATCTTCCCAAACCAGTTTCCATTTG...GATATCTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGTCTGATCACTCAGGGTaGGGTATAAATCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: IENQHLVKCRQACKGKTTSDHSG*GINPPS
Trigger: TGAAGGTGGATTTATACCCAACCCTGAGTGATCAGA...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTTGTATTCTTCAGGCTaGGAAGCCATTTGTTGTCCT +
Preference number: 5 (lower is better)
Translates to: APFYPPEDPFSEYAALQVLYSSG*EAICCP
Trigger: AGGACAACAAATGGCTTCCAAGCCTGAAGAATACAA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TATCACAAACACATCATTCATGTCGTCAGTCAGCATGTTGCAGGCATAACCGATATTAAACCCTCAGCTTaGTACCTTCAGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: YHKHIIHVVSQHVAGITDIKPSA*YLQHLL
Trigger: CAGCAAGTGCTGAAGGTACAAAGCTGAGGGTTTAAT...ATCGGTTATGCCTGCAACATGCTGACTGACGACATGAATGATGTGTTTGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS GCA 90 bp TTAGCAGTAGCTATAAAGCAATCCTGCTCACATCCCATGCATCTCTaGCATCTAAGAGGAAGATTGTATGGTGACATAGCACACTTAGAA +
Preference number: 5 (lower is better)
Translates to: LAVAIKQSCSHPMHL*HLRGRLYGDIAHLE
Trigger: TTCTAAGTGTGCTATGTCACCATACAATCTTCCTCTTAGATGGCAGAGATGCATGGGATGTGAGCAGGATTGCTTTATAGCTACTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS-3UTR CAA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATTTCTGCAGTTTGCTGTaGATGAGCACTTCAGACTGC +
Preference number: 5 (lower is better)
Translates to: FRILSGEPLSHFISMSLHFCSLL*MSTSDC
Trigger: GCAGTCTGAAGTGCTCATCAACAGCAAACTGCAGAA...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559829.5
CDS-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACTTCTGCAGTTTGCTGTaGATGAGCACTTCAGACTGC +
Preference number: 5 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHFCSLL*MSTSDC
Trigger: GCAGTCTGAAGTGCTCATCAACAGCAAACTGCAGAA...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559829.5
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATTCTGCAGTTTGCTGTaGATGAGCACTTCAGACTGC +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLFCSLL*MSTSDC
Trigger: GCAGTCTGAAGTGCTCATCAACAGCAAACTGCAGAA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTTTTTCATTCTGCAGTTaGCTGTTGATGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: APFYPPEDPFSEYAALQVFSFCS*LLMSTS
Trigger: TGAAGTGCTCATCAACAGCAAACTGCAGAATGAAAA...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559829.5
CDS-3UTR CAA 90 bp ACCCTGCAGCAAATTACAGTCTTACACATGCAAGCAAGTTCTAGGAGATCATTCCATGTGGCTCACTACTaGATAGGAGAAGTAAATCAG +
Preference number: 5 (lower is better)
Translates to: TLQQITVLHMQASSRRSFHVAHY*IGEVNQ
Trigger: CTGATTTACTTCTCCTATCAAGTAGTGAGCCACATG...GAATGATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAATTTGCTGCAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGCATGTGGCTCACTACTaGATAGGAGAAGTAAATCAG +
Preference number: 5 (lower is better)
Translates to: IENQHLVKCRQACKGKTTHVAHY*IGEVNQ
Trigger: CTGATTTACTTCTCCTATCAAGTAGTGAGCCACATG...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp TTTGCACATTCGGAAATAAGACCACCTTCCATGAACAAGGAGAAGCCTTTGGAGATTATCTTCTCATTGTaGAGGGAATGCTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FAHSEIRPPSMNKEKPLEIIFSL*RECLLS
Trigger: AGACAGCAAGCATTCCCTCAACAATGAGAAGATAAT...CTCCAAAGGCTTCTCCTTGTTCATGGAAGGTGGTCTTATTTCCGAATGTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAGAGGAAAGTTCTGAATaGGTCCCCAGTTTGACTCTC +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLEESSE*VPSLTL
Trigger: GAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTC...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGGAGCCACTGCAGGTATaGCTTTTCGAGAATAATACA +
Preference number: 5 (lower is better)
Translates to: IENQHLVKCRQACKGKTTEPLQV*LFENNT
Trigger: TGTATTATTCTCGAAAAGCAATACCTGCAGTGGCTC...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCGTGAGGGTACCCGTTTaGTCGGAGAAAATGTACTCA +
Preference number: 5 (lower is better)
Translates to: WERLILQIHVYLSIGMLFVRVPV*SEKMYS
Trigger: TGAGTACATTTTCTCCGACAAAACGGGTACCCTCAC...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACGTGAGGGTACCCGTTTaGTCGGAGAAAATGTACTCA +
Preference number: 5 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHVRVPV*SEKMYS
Trigger: TGAGTACATTTTCTCCGACAAAACGGGTACCCTCAC...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACTTCCCAATTCTTCTATaGTTATGGTCTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDFPILL*LWSLGS
Trigger: GGACCCCAGAGACCATAACAATAGAAGAATTGGGAA...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp TCCTGCTGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAACAAGGAGAAGCCTTaGGAGATATCTAAACTGTGC +
Preference number: 5 (lower is better)
Translates to: SCCKDVQSPLSLDWYKNENKEKP*EISKLC
Trigger: GCACAGTTTAGATATCTCCAAAGGCTTCTCCTTGTT...CTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCAGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp ATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGAACACAAGCACACTTTaGTATTCTTCAGGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: MHPFIRLRIHSVNMQLYKNTSTL*YSSGLE
Trigger: TTCCAAGCCTGAAGAATACAAAAGTGTGCTTGTGTT...CTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp ATTGAAAACCAACATCTGGTTAAGTGTAGGCAGGCATGTAAGGGAAAGACAACGGATGTTCAGTCTCCTTaGTCCCTAGACTGGTATAAA +
Preference number: 5 (lower is better)
Translates to: IENQHLVKCRQACKGKTTDVQSP*SLDWYK
Trigger: TTTATACCAGTCTAGGGACAAAGGAGACTGAACATC...CGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAGATGTTGGTTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS TCA 90 bp AAATTACAGTCTTACACATGCAAGCAAGTTCTAGGAGATCATTCTTaGCATCACTTTCTAGGGCATGAGCCTGAGTTCTTCTCTCACTTC +
Preference number: 5 (lower is better)
Translates to: KLQSYTCKQVLGDHS*HHFLGHEPEFFSHF
Trigger: GAAGTGAGAGAAGAACTCAGGCTCATGCCCTAGAAAGTGATGTCAAGAATGATCTCCTAGAACTTGCTTGCATGTGTAAGACTGTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559998.1
CDS TCA 90 bp TTCCACTTCACGCAATTTCTTTTCACTGCAGAACATTATTATACCTaGTCTTTCACCAGGTCTCAACAGGTGGCCTACAGAAATGCATTC +
Preference number: 5 (lower is better)
Translates to: FHFTQFLFTAEHYYT*SFTRSQQVAYRNAF
Trigger: GAATGCATTTCTGTAGGCCACCTGTTGAGACCTGGTGAAAGATCAGGTATAATAATGTTCTGCAGTGAAAAGAAATTGCGTGAAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559829.5
CDS-3UTR CAA 90 bp GCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATATGCAGCTTTACAAGTTATGAATTTATCTAACTaGTTGTTAGGCACCTCACAG +
Preference number: 5 (lower is better)
Translates to: APFYPPEDPFSEYAALQVMNLSN*LLGTSQ
Trigger: CTGTGAGGTGCCTAACAACAAGTTAGATAAATTCAT...AACTTGTAAAGCTGCATATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CTGCAGTATTTTTCTCAGGACCAGGATAAATCTTCTTCCTTACAATTACCAGAGTTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LQYFSQDQDKSSSLQLPELLREC*LSFQER
Trigger: CCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAA...CTCTGGTAATTGTAAGGAAGAAGATTTATCCTGGTCCTGAGAAAAATACTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLLLREC*LSFQER
Trigger: CCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp ATAACTGAAGCCACTGTTGTTAAGAGAATTACAAGCCAGATGCACTTCTGGGTCATTATCTTCTCATTGTaGAGGGAATGCTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ITEATVVKRITSQMHFWVIIFSL*RECLLS
Trigger: AGACAGCAAGCATTCCCTCAACAATGAGAAGATAAT...GACCCAGAAGTGCATCTGGCTTGTAATTCTCTTAACAACAGTGGCTTCAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATGAGGAAAGTTCTGAATaGGTCCCCAGTTTGACTCTC +
Preference number: 5 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNEESSE*VPSLTL
Trigger: GAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTC...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCTTCCCAATTCTTCTATaGTTATGGTCTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: WERLILQIHVYLSIGMLFFPILL*LWSLGS
Trigger: GGACCCCAGAGACCATAACAATAGAAGAATTGGGAA...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACTTGTATTCTTCAGGCTaGGAAGCCATTTGTTGTCCT +
Preference number: 5 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDLYSSG*EAICCP
Trigger: AGGACAACAAATGGCTTCCAAGCCTGAAGAATACAA...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS CCA 90 bp AACCACTGGTCCAACCCAATTCACTGGCTTAAGAAAGAACACAGATaGTCAACTGGGACTAACAATAGATTCAAAATGAAGATTGTGCAA +
Preference number: 5 (lower is better)
Translates to: NHWSNPIHWLKKEHR*STGTNNRFKMKIVQ
Trigger: TTGCACAATCTTCATTTTGAATCTATTGTTAGTCCCAGTTGACCATCTGTGTTCTTTCTTAAGCCAGTGAATTGGGTTGGACCAGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS-3UTR CAA 90 bp CTGCAGTATTTTTCTCAGGACCAGGATAAATCTTCTTCCTTACAATTACCAGAGTTATATTCACGGTCATaGGCTTTCACTATCCGTTCC +
Preference number: 5 (lower is better)
Translates to: LQYFSQDQDKSSSLQLPELYSRS*AFTIRS
Trigger: GGAACGGATAGTGAAAGCCAATGACCGTGAATATAA...CTCTGGTAATTGTAAGGAAGAAGATTTATCCTGGTCCTGAGAAAAATACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATTATATTCACGGTCATaGGCTTTCACTATCCGTTCC +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLLYSRS*AFTIRS
Trigger: GGAACGGATAGTGAAAGCCAATGACCGTGAATATAA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTACATGTGGCTCACTACTaGATAGGAGAAGTAAATCAG +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLHVAHY*IGEVNQ
Trigger: CTGATTTACTTCTCCTATCAAGTAGTGAGCCACATG...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATTTGTTGAGGGAATGCTaGCTGTCTTTCCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNLLREC*LSFQER
Trigger: CCTTTCTTGGAAAGACAGCAAGCATTCCCTCAACAA...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAAGGATTATCTTCTCATaGTTGAGGGAATGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLRIIFS*LRECLL
Trigger: CAGCAAGCATTCCCTCAACAATGAGAAGATAATCCT...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATTCTGATCACTCAGGGTaGGGTATAAATCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNSDHSG*GINPPS
Trigger: TGAAGGTGGATTTATACCCAACCCTGAGTGATCAGA...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATGTAACAGCGAGTGTTTaGTCCACCAAATCACAAACC +
Preference number: 5 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNVTASV*STKSQT
Trigger: GGTTTGTGATTTGGTGGACAAAACACTCGCTGTTAC...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp CACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGGACTTCAGAGTTTGTGCTTaGACAGACAATCATCAACCA +
Preference number: 5 (lower is better)
Translates to: HLTLLGNVTLSDQEFNRDFRVCA*TDNHQP
Trigger: TGGTTGATGATTGTCTGTCAAAGCACAAACTCTGAA...GTCCCTATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATTTTCCTAGTCTGCTCTaGCTGGTCTCTTTCTCATTT +
Preference number: 5 (lower is better)
Translates to: FRILSGEPLSHFISMSLHFPSLL*LVSFSF
Trigger: AAATGAGAAAGAGACCAGCAAGAGCAGACTAGGAAA...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559829.5
CDS GCA 90 bp ACAGACAACTTAGTGGAACAGTTGCCTATTCAAGCTTTGTGCGTCTaGAAATACAAATCACTGACTACTCTTCTGTGTTCTAAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: TDNLVEQLPIQALCV*KYKSLTTLLCSKSF
Trigger: AAAACTCTTAGAACACAGAAGAGTAGTCAGTGATTTGTATTTGCAGACGCACAAAGCTTGAATAGGCAACTGTTCCACTAAGTTGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS GCA 90 bp GTTTTAACAGACAACTTAGTGGAACAGTTGCCTATTCAAGCTTTGTaGGTCTGCAAATACAAATCACTGACTACTCTTCTGTGTTCTAAG +
Preference number: 5 (lower is better)
Translates to: VLTDNLVEQLPIQAL*VCKYKSLTTLLCSK
Trigger: CTTAGAACACAGAAGAGTAGTCAGTGATTTGTATTTGCAGACGCACAAAGCTTGAATAGGCAACTGTTCCACTAAGTTGTCTGTTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS-3UTR CAA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGTTTTCATTCTGCAGTTaGCTGTTGATGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLFSFCS*LLMSTS
Trigger: TGAAGTGCTCATCAACAGCAAACTGCAGAATGAAAA...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTATTTTCATTCTGCAGTTaGCTGTTGATGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLFSFCS*LLMSTS
Trigger: TGAAGTGCTCATCAACAGCAAACTGCAGAATGAAAA...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACATTATCTTCTCATTGTaGAGGGAATGCTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHIIFSL*RECLLS
Trigger: AGACAGCAAGCATTCCCTCAACAATGAGAAGATAAT...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAATTATCTTCTCATTGTaGAGGGAATGCTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLIIFSL*RECLLS
Trigger: AGACAGCAAGCATTCCCTCAACAATGAGAAGATAAT...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAGGATTATCTTCTCATaGTTGAGGGAATGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNRIIFS*LRECLL
Trigger: CAGCAAGCATTCCCTCAACAATGAGAAGATAATCCT...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS-3UTR CAA 90 bp ATATATACCTTTAAAATGCACCCTTTTATCCGCCTGAGGATCCATTCAGTGAATAGGATTATCTTCTCATaGTTGAGGGAATGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: IYTFKMHPFIRLRIHSVNRIIFS*LRECLL
Trigger: CAGCAAGCATTCCCTCAACAATGAGAAGATAATCCT...ATTCACTGAATGGATCCTCAGGCGGATAAAAGGGTGCATTTTAAAGGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATCACTCTTTAAAGTACTaGTCATCCAGGTCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: FRILSGEPLSHFISMSLHHSLKY*SSRSLY
Trigger: ATACAGAGACCTGGATGACAAGTACTTTAAAGAGTG...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TTTAGAATACTTAGTGGCGAGCCTCTCTCACATTTCATAAGCATGTCCTTACATAACACAAGCACACTTTaGTATTCTTCAGGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: FRILSGEPLSHFISMSLHNTSTL*YSSGLE
Trigger: TTCCAAGCCTGAAGAATACAAAAGTGTGCTTGTGTT...ATGTAAGGACATGCTTATGAAATGTGAGAGAGGCTCGCCACTAAGTATTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp TGGGAAAGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCTTCAGAGTTTGTGCTTaGACAGACAATCATCAACCA +
Preference number: 5 (lower is better)
Translates to: WERLILQIHVYLSIGMLFFRVCA*TDNHQP
Trigger: TGGTTGATGATTGTCTGTCAAAGCACAAACTCTGAA...GAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCTTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS CCA 90 bp GCTTTGATGTCAGAGTACCAATCAGTCCAGATACATTTAGTGTGTTaGATAAGAAACCATCTTCCCAGTAAAGATACCTCAACATTTCTT +
Preference number: 5 (lower is better)
Translates to: ALMSEYQSVQIHLVC*IRNHLPSKDTSTFL
Trigger: AAGAAATGTTGAGGTATCTTTACTGGGAAGATGGTTTCTTATCCAACACACTAAATGTATCTGGACTGATTGGTACTCTGACATCAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS-3UTR CAA 90 bp AGGCTGATCTTACAGATACATGTTTATCTGTCAATAGGCATGCTTTTCAGCTTGAATTTATCTAACTTGTaGTTAGGCACCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: RLILQIHVYLSIGMLFSLNLSNL*LGTSQT
Trigger: TGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATT...CAAGCTGAAAAGCATGCCTATTGACAGATAAACATGTATCTGTAAGATCAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284509.11
ENST00000557955.5
ENST00000558906.5
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAAATTTATCTAACTTGTaGTTAGGCACCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLNLSNL*LGTSQT
Trigger: TGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATT...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp CTGCAGTATTTTTCTCAGGACCAGGATAAATCTTCTTCCTTACAATTACCAGAGATGAATTTATCTAACTaGTTGTTAGGCACCTCACAG +
Preference number: 5 (lower is better)
Translates to: LQYFSQDQDKSSSLQLPEMNLSN*LLGTSQ
Trigger: CTGTGAGGTGCCTAACAACAAGTTAGATAAATTCAT...CTCTGGTAATTGTAAGGAAGAAGATTTATCCTGGTCCTGAGAAAAATACTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS-3UTR CAA 90 bp TGCAAAGATGTTCAGTCTCCTTTGTCCCTAGACTGGTATAAAAATGAGAAACACATGAATTTATCTAACTaGTTGTTAGGCACCTCACAG +
Preference number: 5 (lower is better)
Translates to: CKDVQSPLSLDWYKNEKHMNLSN*LLGTSQ
Trigger: CTGTGAGGTGCCTAACAACAAGTTAGATAAATTCAT...GTGTTTCTCATTTTTATACCAGTCTAGGGACAAAGGAGACTGAACATCTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284509.11
ENST00000559726.5
ENST00000559829.5
CDS-3UTR CAA 90 bp GTCCCATTTGTAACAGATGTTGCAGATCATAAGCAGTTAAGAGCAAGACATCTAATGAATTTATCTAACTaGTTGTTAGGCACCTCACAG +
Preference number: 5 (lower is better)
Translates to: VPFVTDVADHKQLRARHLMNLSN*LLGTSQ
Trigger: CTGTGAGGTGCCTAACAACAAGTTAGATAAATTCAT...TAGATGTCTTGCTCTTAACTGCTTATGATCTGCAACATCTGTTACAAATGGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674213.1
CDS-3UTR CAA 90 bp AAGTGTCACCTGACTCTCTTGGGAAATGTAACTTTGTCTGACCAAGAATTTAATAATTTATCTAACTTGTaGTTAGGCACCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: KCHLTLLGNVTLSDQEFNNLSNL*LGTSQT
Trigger: TGTCTGTGAGGTGCCTAACAACAAGTTAGATAAATT...ATTAAATTCTTGGTCAGACAAAGTTACATTTCCCAAGAGAGTCAGGTGACACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284509.11
ENST00000559726.5
CDS GCA 72 bp AGGTGGACCGGCGCAGCAATCAAGTGGCCCGGGCGCTaGACGACCACCTCGGCCTGCGCCAGGGAGACTGCG +
Preference number: 6 (lower is better)
Translates to: RWTGAAIKWPGR*TTTSACARETA
Trigger: CGCAGTCTCCCTGGCGCAGGCCGAGGTGGTCGTGCAGCGCCCGGGCCACTTGATTGCTGCGCCGGTCCACCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS CCA 72 bp TCACCTACGCGCAGGTGGACCGGCGCAGCAATCAAGTaGCCCGGGCGCTGCACGACCACCTCGGCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: SPTRRWTGAAIK*PGRCTTTSACA
Trigger: GGCGCAGGCCGAGGTGGTCGTGCAGCGCCCGGGCCACTTGATTGCTGCGCCGGTCCACCTGCGCGTAGGTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS GCA 72 bp GCGCTGCACGACCACCTCGGCCTGCGCCAGGGAGACTaGGTGGCGCTCCTTATGGGTAACGAGCCGGCCTAC +
Preference number: 6 (lower is better)
Translates to: ALHDHLGLRQGD*VALLMGNEPAY
Trigger: GTAGGCCGGCTCGTTACCCATAAGGAGCGCCACGCAGTCTCCCTGGCGCAGGCCGAGGTGGTCGTGCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS CCA 72 bp AGCGGCGGCCGGCGCGCACCATCCTGCGGGCGTTCCTaGAGAAAGCGCGCCAGACGCCACACAAGCCTTTTC +
Preference number: 6 (lower is better)
Translates to: SGGRRAPSCGRS*RKRARRHTSLF
Trigger: GAAAAGGCTTGTGTGGCGTCTGGCGCGCTTTCTCCAGGAACGCCCGCAGGATGGTGCGCGCCGGCCGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS GCA 72 bp CTGCCCTCGCTGGGACAGAGGGCCCCGCAGCCGTCATaGTTTCCGCCATCTACACAGTCCTGGCGGGACTGC +
Preference number: 6 (lower is better)
Translates to: LPSLGQRAPQPS*FPPSTQSWRDC
Trigger: GCAGTCCCGCCAGGACTGTGTAGATGGCGGAAAGCATGACGGCTGCGGGGCCCTCTGTCCCAGCGAGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS CCA 72 bp TCGGCCTGCGCCAGGGAGACTGCGTGGCGCTCCTTATaGGTAACGAGCCGGCCTACGTGTGGCTGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: SACARETAWRSL*VTSRPTCGCGW
Trigger: CCAGCCACAGCCACACGTAGGCCGGCTCGTTACCCATAAGGAGCGCCACGCAGTCTCCCTGGCGCAGGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS CCA 72 bp TGCTCTTCCGCGACGAGACTCTCACCTACGCGCAGGTaGACCGGCGCAGCAATCAAGTGGCCCGGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: CSSATRLSPTRR*TGAAIKWPGRC
Trigger: GCAGCGCCCGGGCCACTTGATTGCTGCGCCGGTCCACCTGCGCGTAGGTGAGAGTCTCGTCGCGGAAGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS CCA 72 bp TGCACGACCACCTCGGCCTGCGCCAGGGAGACTGCGTaGCGCTCCTTATGGGTAACGAGCCGGCCTACGTGT +
Preference number: 6 (lower is better)
Translates to: CTTTSACARETA*RSLWVTSRPTC
Trigger: ACACGTAGGCCGGCTCGTTACCCATAAGGAGCGCCACGCAGTCTCCCTGGCGCAGGCCGAGGTGGTCGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS CAA 72 bp TGCTGCCCATACTTCTTCCAGGACATAGGCTACTTCTaGAAGGTGGCCGCCGTGGGCCGGAGGGTGCGCAGC +
Preference number: 6 (lower is better)
Translates to: CCPYFFQDIGYF*KVAAVGRRVRS
Trigger: GCTGCGCACCCTCCGGCCCACGGCGGCCACCTTCAAGAAGTAGCCTATGTCCTGGAAGAAGTATGGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS TCA 72 bp GAGCCCAGTGGGCAGTGCTTTAACCAGCCCTCCAGGTaGTTCCTATGCACGCTAAAGCTTGAGAACCACTGG +
Preference number: 6 (lower is better)
Translates to: EPSGQCFNQPSR*FLCTLKLENHW
Trigger: CCAGTGGTTCTCAAGCTTTAGCGTGCATAGGAATCACCTGGAGGGCTGGTTAAAGCACTGCCCACTGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS GCA 72 bp GGACTGCTGTTCCTGCCGCTCCTGGTGAACCTCTGCTaGCCATACTTCTTCCAGGACATAGGCTACTTCTTG +
Preference number: 6 (lower is better)
Translates to: GLLFLPLLVNLC*PYFFQDIGYFL
Trigger: CAAGAAGTAGCCTATGTCCTGGAAGAAGTATGGGCAGCAGAGGTTCACCAGGAGCGGCAGGAACAGCAGTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558829.1
CDS GCA 72 bp TTTTCCACCTGGCCCTGTCTTAGCGCAGGTAAAATATaGCTCAGGGACAGTGGTCTGACAAGAGGGCTGAAA +
Preference number: 6 (lower is better)
Translates to: FSTWPCLSAGKI*LRDSGLTRGLK
Trigger: TTTCAGCCCTCTTGTCAGACCACTGTCCCTGAGGCATATTTTACCTGCGCTAAGACAGGGCCAGGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS GCA 72 bp GGTGGTGTGCCTTACAGCTGGGTTCAACCATCAAGCTaGTCATGTCTTTGGGGCAATTATTGTTCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: GGVPYSWVQPSS*SCLWGNYCSPL
Trigger: CAAGGGAGAACAATAATTGCCCCAAAGACATGAGCAGCTTGATGGTTGAACCCAGCTGTAAGGCACACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CCA 72 bp AAATCCTGTACCATGAACAGACATCCCTTTTCCACCTaGCCCTGTCTTAGCGCAGGTAAAATATGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: KSCTMNRHPFST*PCLSAGKICLR
Trigger: CCTGAGGCATATTTTACCTGCGCTAAGACAGGGCCAGGTGGAAAAGGGATGTCTGTTCATGGTACAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CAA 90 bp CAACAGACTAGGAAGCCACAGGCCACATTCCAATGCTTGTCTTTGTaGGACAAAGGAGGAATTATGAGCATGCAAATAACCCCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: QQTRKPQATFQCLSL*DKGGIMSMQITPAP
Trigger: TGGGGCTGGGGTTATTTGCATGCTCATAATTCCTCCTTTGTCCAACAAAGACAAGCATTGGAATGTGGCCTGTGGCTTCCTAGTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS GCA 72 bp TCCTCTGCTGGGATGTCCATCCTCTTACTTCTCATCTaGTTCAATATGTTTGATCCTGGGCTGAGAAACCAC +
Preference number: 6 (lower is better)
Translates to: SSAGMSILLLLI*FNMFDPGLRNH
Trigger: GTGGTTTCTCAGCCCAGGATCAAACATATTGAAGCAGATGAGAAGTAAGAGGATGGACATCCCAGCAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560161.1
CDS GCA 72 bp TCTTCACTTCTGGAACTTTCCTCCTGTTGTCTCCTCTaGTGGGATGTCCATCCTCTTACTTCTCATCTGCTT +
Preference number: 6 (lower is better)
Translates to: SSLLELSSCCLL*WDVHPLTSHLL
Trigger: AAGCAGATGAGAAGTAAGAGGATGGACATCCCAGCAGAGGAGACAACAGGAGGAAAGTTCCAGAAGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560161.1
CDS CCA 72 bp GACTTTACTCTGGTCTGGGTTCAAGGAAGCAGAACTTaGGATACTCTTCTAGGTTTTCTAGCCCAGTGGTTC +
Preference number: 6 (lower is better)
Translates to: DFTLVWVQGSRT*DTLLGFLAQWF
Trigger: GAACCACTGGGCTAGAAAACCTAGAAGAGTATCCCAAGTTCTGCTTCCTTGAACCCAGACCAGAGTAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CAA 72 bp GGACTTTACTCTGGTCTGGGTTCAAGGAAGCAGAACTaGGGATACTCTTCTAGGTTTTCTAGCCCAGTGGTT +
Preference number: 6 (lower is better)
Translates to: GLYSGLGSRKQN*GYSSRFSSPVV
Trigger: AACCACTGGGCTAGAAAACCTAGAAGAGTATCCCAAGTTCTGCTTCCTTGAACCCAGACCAGAGTAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS GCA 72 bp CAAACATTTCAGAAACCTAATCACAGACAGGTGGTGTaGCTTACAGCTGGGTTCAACCATCAAGCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: QTFQKPNHRQVV*LTAGFNHQAAH
Trigger: ATGAGCAGCTTGATGGTTGAACCCAGCTGTAAGGCACACCACCTGTCTGTGATTAGGTTTCTGAAATGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CCA 72 bp ACCACGACCAGAGAACTATCCAGCATGGGTCATAACTaGCATTTACAAAATGAGCACTCAGGAGAACATGGA +
Preference number: 6 (lower is better)
Translates to: TTTRELSSMGHN*HLQNEHSGEHG
Trigger: TCCATGTTCTCCTGAGTGCTCATTTTGTAAATGCCAGTTATGACCCATGCTGGATAGTTCTCTGGTCGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CCA 72 bp CAGAAGCTTCAACCACGACCAGAGAACTATCCAGCATaGGTCATAACTGGCATTTACAAAATGAGCACTCAG +
Preference number: 6 (lower is better)
Translates to: QKLQPRPENYPA*VITGIYKMSTQ
Trigger: CTGAGTGCTCATTTTGTAAATGCCAGTTATGACCCATGCTGGATAGTTCTCTGGTCGTGGTTGAAGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CAA 72 bp CAACAGACTAGGAAGCCACAGGCCACATTCCAATGCTaGTCTTTGTTGGACAAAGGAGGAATTATGAGCATG +
Preference number: 6 (lower is better)
Translates to: QQTRKPQATFQC*SLLDKGGIMSM
Trigger: CATGCTCATAATTCCTCCTTTGTCCAACAAAGACAAGCATTGGAATGTGGCCTGTGGCTTCCTAGTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS TCA 72 bp GCTGACACAAATCTTCAACTCATTGATGATGGCATCTaGCTGATGGCTTGTGTTCCTGCCCAAGCTATTCTT +
Preference number: 6 (lower is better)
Translates to: ADTNLQLIDDGI*LMACVPAQAIL
Trigger: AAGAATAGCTTGGGCAGGAACACAAGCCATCAGTCAGATGCCATCATCAATGAGTTGAAGATTTGTGTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560161.1
CDS GCA 72 bp GCTATAAAGCAATCCTGCTCACATCCCATGCATCTCTaGCATCTAAGAGGAAGATTGTATGGTGACATAGCA +
Preference number: 6 (lower is better)
Translates to: AIKQSCSHPMHL*HLRGRLYGDIA
Trigger: TGCTATGTCACCATACAATCTTCCTCTTAGATGGCAGAGATGCATGGGATGTGAGCAGGATTGCTTTATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CAA 72 bp TCACATCCCATGCATCTCTGCCATCTAAGAGGAAGATaGTATGGTGACATAGCACACTTAGAAGTGGCATTC +
Preference number: 6 (lower is better)
Translates to: SHPMHLCHLRGR*YGDIAHLEVAF
Trigger: GAATGCCACTTCTAAGTGTGCTATGTCACCATACAATCTTCCTCTTAGATGGCAGAGATGCATGGGATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS TCA 72 bp ACACAAATCTTCAACTCATTGATGATGGCATCTGACTaGTGGCTTGTGTTCCTGCCCAAGCTATTCTTCACT +
Preference number: 6 (lower is better)
Translates to: TQIFNSLMMASD*WLVFLPKLFFT
Trigger: AGTGAAGAATAGCTTGGGCAGGAACACAAGCCATCAGTCAGATGCCATCATCAATGAGTTGAAGATTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560161.1
CDS TCA 72 bp CATGCATCTCTGCCATCTAAGAGGAAGATTGTATGGTaGCATAGCACACTTAGAAGTGGCATTCTACTGTTC +
Preference number: 6 (lower is better)
Translates to: HASLPSKRKIVW*HSTLRSGILLF
Trigger: GAACAGTAGAATGCCACTTCTAAGTGTGCTATGTCACCATACAATCTTCCTCTTAGATGGCAGAGATGCATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS TCA 72 bp TGTCGTCAGTCAGCATGTTGCAGGCATAACCGATGTTaGTGGCAGTTTCTAACACAAAATAAAGCCCAATTC +
Preference number: 6 (lower is better)
Translates to: CRQSACCRHNRC*WQFLTQNKAQF
Trigger: GAATTGGGCTTTATTTTGTGTTAGAAACTGCCATCAACATCGGTTATGCCTGCAACATGCTGACTGACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559998.1
ENST00000561104.1
CDS TCA 72 bp TCTTACACATGCAAGCAAGTTCTAGGAGATCATTCTTaGCATCACTTTCTAGGGCATGAGCCTGAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SYTCKQVLGDHS*HHFLGHEPEFF
Trigger: GAAGAACTCAGGCTCATGCCCTAGAAAGTGATGTCAAGAATGATCTCCTAGAACTTGCTTGCATGTGTAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557955.5
ENST00000559998.1
CDS CCA 72 bp TACAGCTGGGTTCAACCATCAAGCTGCTCATGTCTTTaGGGCAATTATTGTTCTCCCTTGTTGTTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: YSWVQPSSCSCL*GNYCSPLLFSF
Trigger: AAAAGAGAACAACAAGGGAGAACAATAATTGCCCCAAAGACATGAGCAGCTTGATGGTTGAACCCAGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CAA 72 bp TTACAGCTGGGTTCAACCATCAAGCTGCTCATGTCTTaGGGGCAATTATTGTTCTCCCTTGTTGTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: LQLGSTIKLLMS*GQLLFSLVVLF
Trigger: AAAGAGAACAACAAGGGAGAACAATAATTGCCCCAAAGACATGAGCAGCTTGATGGTTGAACCCAGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CAA 72 bp ATTACCAGAGTACTTCCTGTCATTAAACCCTCAGCTTaGTACCTTCAGCACTTGCTGTTGATGAGCACTTCA +
Preference number: 6 (lower is better)
Translates to: ITRVLPVIKPSA*YLQHLLLMSTS
Trigger: TGAAGTGCTCATCAACAGCAAGTGCTGAAGGTACAAAGCTGAGGGTTTAATGACAGGAAGTACTCTGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558906.5
ENST00000559726.5
CDS TCA 72 bp GGAAATTCCTCTTCAAGAACAGTTGAGTGCAGGCTTTaGAGTAACATAAGGCAAGCTGACAAACCTACAGAA +
Preference number: 6 (lower is better)
Translates to: GNSSSRTVECRL*SNIRQADKPTE
Trigger: TTCTGTAGGTTTGTCAGCTTGCCTTATGTTACTTCAAAGCCTGCACTCAACTGTTCTTGAAGAGGAATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS TCA 72 bp TTCCAAAAGAGGAAAGTTCTGAATTGGTCCCCAGTTTaGCTCTCCCAGATTGAATTTCCCATAGTACTAGAG +
Preference number: 6 (lower is better)
Translates to: FQKRKVLNWSPV*LSQIEFPIVLE
Trigger: CTCTAGTACTATGGGAAATTCAATCTGGGAGAGTCAAACTGGGGACCAATTCAGAACTTTCCTCTTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558959.5
CDS CCA 72 bp AAACAAAAAGTCAGCAGATTGGACTTTACTCTGGTCTaGGTTCAAGGAAGCAGAACTTGGGATACTCTTCTA +
Preference number: 6 (lower is better)
Translates to: KQKVSRLDFTLV*VQGSRTWDTLL
Trigger: TAGAAGAGTATCCCAAGTTCTGCTTCCTTGAACCCAGACCAGAGTAAAGTCCAATCTGCTGACTTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS GCA 72 bp TTAGTGGAACAGTTGCCTATTCAAGCTTTGTGCGTCTaGAAATACAAATCACTGACTACTCTTCTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: LVEQLPIQALCV*KYKSLTTLLCS
Trigger: AGAACACAGAAGAGTAGTCAGTGATTTGTATTTGCAGACGCACAAAGCTTGAATAGGCAACTGTTCCACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CAA 72 bp ACAGACAACTTAGTGGAACAGTTGCCTATTCAAGCTTaGTGCGTCTGCAAATACAAATCACTGACTACTCTT +
Preference number: 6 (lower is better)
Translates to: TDNLVEQLPIQA*CVCKYKSLTTL
Trigger: AAGAGTAGTCAGTGATTTGTATTTGCAGACGCACAAAGCTTGAATAGGCAACTGTTCCACTAAGTTGTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CAA 90 bp ACAGTTTTAACAGACAACTTAGTGGAACAGTTGCCTATTCAAGCTTaGTGCGTCTGCAAATACAAATCACTGACTACTCTTCTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: TVLTDNLVEQLPIQA*CVCKYKSLTTLLCS
Trigger: AGAACACAGAAGAGTAGTCAGTGATTTGTATTTGCAGACGCACAAAGCTTGAATAGGCAACTGTTCCACTAAGTTGTCTGTTAAAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS GCA 72 bp TTAGATCTCTTAGAAACACCCGTTAGCAGATGGTCTTaGTTTGTTCTTATGTGGAAGGAAAATCAACAGACT +
Preference number: 6 (lower is better)
Translates to: LDLLETPVSRWS*FVLMWKENQQT
Trigger: AGTCTGTTGATTTTCCTTCCACATAAGAACAAAGCAAGACCATCTGCTAACGGGTGTTTCTAAGAGATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CCA 72 bp TCAGAGTACCAATCAGTCCAGATACATTTAGTGTGTTaGATAAGAAACCATCTTCCCAGTAAAGATACCTCA +
Preference number: 6 (lower is better)
Translates to: SEYQSVQIHLVC*IRNHLPSKDTS
Trigger: TGAGGTATCTTTACTGGGAAGATGGTTTCTTATCCAACACACTAAATGTATCTGGACTGATTGGTACTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CCA 72 bp TCCAACCCAATTCACTGGCTTAAGAAAGAACACAGATaGTCAACTGGGACTAACAATAGATTCAAAATGAAG +
Preference number: 6 (lower is better)
Translates to: SNPIHWLKKEHR*STGTNNRFKMK
Trigger: CTTCATTTTGAATCTATTGTTAGTCCCAGTTGACCATCTGTGTTCTTTCTTAAGCCAGTGAATTGGGTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5
CDS CAA 90 bp GTTAGTTTCAACTTCACAGTTTTAACAGACAACTTAGTGGAACAGTaGCCTATTCAAGCTTTGTGCGTCTGCAAATACAAATCACTGACT +
Preference number: 6 (lower is better)
Translates to: VSFNFTVLTDNLVEQ*PIQALCVCKYKSLT
Trigger: AGTCAGTGATTTGTATTTGCAGACGCACAAAGCTTGAATAGGCAACTGTTCCACTAAGTTGTCTGTTAAAACTGTGAAGTTGAAACTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561385.5