RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP8B3 (Homo sapiens)

Ensembl gene IDs: ENSG00000130270

Ensembl transcript IDs: ENST00000310127.10, ENST00000525591.5, ENST00000526092.6, ENST00000526847.1, ENST00000531925.5, ENST00000533107.3, ENST00000533993.5, ENST00000587160.2

Found 829 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCGCTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTaGGCTGGCGGTGCAGCCAGCGGGAGCCCGAACCTCCGGCACAGC +
Preference number: 1 (lower is better)
Translates to: ARSCSTSELRRALES*AGGAASGSPNLRHS
Trigger: GCTGTGCCGGAGGTTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 90 bp CCACGAAGGCGCGCTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTaGAGTCCTGGGCTGGCGGTGCAGCCAGCGGGAGCCCGAACCTCC +
Preference number: 1 (lower is better)
Translates to: PRRRAPAAPRSYGGL*SPGLAVQPAGARTS
Trigger: GGAGGTTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGCCTTCGTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 90 bp CTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTaGCGGTGCAGCCAGCGGGAGCCCGAACCTCCGGCACAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: LLQHLGATAGSGVLG*RCSQREPEPPAQQG
Trigger: TCCCTGCTGTGCCGGAGGTTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 90 bp CTGGGCGCTCACGGGGGCTCTCCCGCACCATCACCGTGTGGCAGATaGCCAGCAGGCGCCAGAACTCCCGCACGGCCTCGTCCCCGTTGG +
Preference number: 1 (lower is better)
Translates to: LGAHGGSPAPSPCGR*PAGARTPARPRPRW
Trigger: CCAACGGGGACGAGGCCGTGCGGGAGTTCTGGCGCCTGCTGGCCATCTGCCACACGGTGATGGTGCGGGAGAGCCCCCGTGAGCGCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 90 bp ATGACCGCCTGGCACTTGGACGCCAGGTCCACGAAGGCGCGCTCCTaGAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTGGC +
Preference number: 1 (lower is better)
Translates to: MTAWHLDARSTKARS*STSELRRALESWAG
Trigger: GCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGCCTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 90 bp CAGCCAGCGGGAGCCCGAACCTCCGGCACAGCAGGGACAGGCGCCTaGCGTAGAGGAAATCCCTCCTGGACTGGCCGAGCTCCTGCCACG +
Preference number: 1 (lower is better)
Translates to: QPAGARTSGTAGTGA*RRGNPSWTGRAPAT
Trigger: CGTGGCAGGAGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTGTGCCGGAGGTTCGGGCTCCCGCTGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
3UTR TCA 90 bp CCCGGGCTCCCACCCCACTCCCCGCGGGTCCACGCTCCCACCCAGTaGCCTCCAGGGTCCTGCACCCACGTCCTCTTCAGACTTTCCTTG +
Preference number: 1 (lower is better)
Translates to: PGLPPHSPRVHAPTQ*PPGSCTHVLFRLSL
Trigger: CAAGGAAAGTCTGAAGAGGACGTGGGTGCAGGACCCTGGAGGTCACTGGGTGGGAGCGTGGACCCGCGGGGAGTGGGGTGGGAGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 90 bp CGCCAGAACTCCCGCACGGCCTCGTCCCCGTTGGTCCGCACGAGGTaGAGCAGGGCCGCATTGTGGAAGAGCAGCTTCCCGTCGGCGAAC +
Preference number: 1 (lower is better)
Translates to: RQNSRTASSPLVRTR*SRAALWKSSFPSAN
Trigger: GTTCGCCGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGACGAGGCCGTGCGGGAGTTCTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR TCA 90 bp AGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTaGACTGCCTGCATGCCCTCCTGGCCCGCCAGCCCCACGCCCACG +
Preference number: 1 (lower is better)
Translates to: RRCRKQNWPSTKSLF*TACMPSWPASPTPT
Trigger: CGTGGGCGTGGGGCTGGCGGGCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR GCA 90 bp CTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTaGCTGCATGCCCTCCTGGCCCGCCAGCCCCACGCCCACGTCCGC +
Preference number: 1 (lower is better)
Translates to: LQEAELAEHEVAVLN*LHALLARQPHAHVR
Trigger: GCGGACGTGGGCGTGGGGCTGGCGGGCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 90 bp AGATGGCCAGCAGGCGCCAGAACTCCCGCACGGCCTCGTCCCCGTTaGTCCGCACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCT +
Preference number: 1 (lower is better)
Translates to: RWPAGARTPARPRPR*SARGAAGPHCGRAA
Trigger: AGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGACGAGGCCGTGCGGGAGTTCTGGCGCCTGCTGGCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 90 bp ATGGACAGCAGGCAAGACAGGGCCACCACGACCGCAAAGGACTGGTaGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCGCGGCTGATCCAC +
Preference number: 1 (lower is better)
Translates to: MDSRQDRATTTAKDW*SLKLAGPAVSRLIH
Trigger: GTGGATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAGTCCTTTGCGGTCGTGGTGGCCCTGTCTTGCCTGCTGTCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 90 bp GTGATGGACAGCAGGCAAGACAGGGCCACCACGACCGCAAAGGACTaGTGGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCGCGGCTGATC +
Preference number: 1 (lower is better)
Translates to: VMDSRQDRATTTAKD*WSLKLAGPAVSRLI
Trigger: GATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAGTCCTTTGCGGTCGTGGTGGCCCTGTCTTGCCTGCTGTCCATCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 90 bp CCTGAGGTCCTGCTCCATCTCGTTGTACACCTGTTGCAGGGCCTGTaGCCGGTTCTGCAGCAGGAGGCTGGCCTCCTGGTGGCGCTGCTG +
Preference number: 1 (lower is better)
Translates to: PEVLLHLVVHLLQGL*PVLQQEAGLLVALL
Trigger: CAGCAGCGCCACCAGGAGGCCAGCCTCCTGCTGCAGAACCGGGCACAGGCCCTGCAACAGGTGTACAACGAGATGGAGCAGGACCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 90 bp GCTCCCAGCAGCCTGAGGTCCTGCTCCATCTCGTTGTACACCTGTTaGAGGGCCTGTGCCCGGTTCTGCAGCAGGAGGCTGGCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: APSSLRSCSISLYTC*RACARFCSRRLASW
Trigger: CCAGGAGGCCAGCCTCCTGCTGCAGAACCGGGCACAGGCCCTGCAACAGGTGTACAACGAGATGGAGCAGGACCTCAGGCTGCTGGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 90 bp CCCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTaGTCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGAC +
Preference number: 1 (lower is better)
Translates to: PSAEGNDCSSGGKDS*SSPGTSSHSMDDDD
Trigger: GTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 90 bp TCTTCAGACTTTCCTTGTCCTCCCCATCGCCCGAGCCCTAAGCTCTaGAAGGGTTCGCCATCAGGGCCTCGGCCTCTGTCCTCGTCCCGG +
Preference number: 1 (lower is better)
Translates to: SSDFPCPPHRPSPKL*KGSPSGPRPLSSSR
Trigger: CCGGGACGAGGACAGAGGCCGAGGCCCTGATGGCGAACCCTTGCAGAGCTTAGGGCTCGGGCGATGGGGAGGACAAGGAAAGTCTGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 90 bp TGTACACCTGTTGCAGGGCCTGTGCCCGGTTCTGCAGCAGGAGGCTaGCCTCCTGGTGGCGCTGCTGCCAGTCCTCGTAAATGTCCTCAG +
Preference number: 1 (lower is better)
Translates to: CTPVAGPVPGSAAGG*PPGGAAASPRKCPQ
Trigger: CTGAGGACATTTACGAGGACTGGCAGCAGCGCCACCAGGAGGCCAGCCTCCTGCTGCAGAACCGGGCACAGGCCCTGCAACAGGTGTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 90 bp CAGGGCCTCGGCCTCTGTCCTCGTCCCGGCCAAACGCCTAATGAATaGAGGCCCGGTTCCTGTCGGACTCTTCCCCATCAGAATCTGGCA +
Preference number: 1 (lower is better)
Translates to: QGLGLCPRPGQTPNE*RPGSCRTLPHQNLA
Trigger: TGCCAGATTCTGATGGGGAAGAGTCCGACAGGAACCGGGCCTGCATTCATTAGGCGTTTGGCCGGGACGAGGACAGAGGCCGAGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 90 bp GCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTaGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTC +
Preference number: 1 (lower is better)
Translates to: ADFSSEESGWLSNVS*PERNDWLPRGCGWL
Trigger: GAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 90 bp GATGATGACTGCTTCTCCGCGGGCCACAGCTCCACCTCCATAGGCTaGTCGCTCGTGGACGTGGACGATTCTTCCAGACTTGGTGGCAGA +
Preference number: 1 (lower is better)
Translates to: DDDCFSAGHSSTSIG*SLVDVDDSSRLGGR
Trigger: TCTGCCACCAAGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCGGAGAAGCAGTCATCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 90 bp GACCCCTGGTCCCCTCCGCAGAATTGTGCCCTGAGTGATGAGGTTTaGATATCCCTCACGGTGGGAGAAAGCATAGCTGGAACGGCGGGC +
Preference number: 1 (lower is better)
Translates to: DPWSPPQNCALSDEV*ISLTVGESIAGTAG
Trigger: GCCCGCCGTTCCAGCTATGCTTTCTCCCACCGTGAGGGATATGCAAACCTCATCACTCAGGGCACAATTCTGCGGAGGGGACCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR TCA 90 bp AGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTaGAGAGCTCGTCCTTCTGCCCCACCACGTACAGCTCCGGCTTCT +
Preference number: 1 (lower is better)
Translates to: RWSHHGRWLGRRPSS*RARPSAPPRTAPAS
Trigger: AGAAGCCGGAGCTGTACGTGGTGGGGCAGAAGGACGAGCTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 90 bp GAGTCTGGCTGGCTCTCCAACGTCAGCTGGCCTGAAAGAAATGACTaGCTCCCCAGAGGCTGTGGCTGGCTCTCAAATGACGACAGCTGG +
Preference number: 1 (lower is better)
Translates to: ESGWLSNVSWPERND*LPRGCGWLSNDDSW
Trigger: CCAGCTGTCGTCATTTGAGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGTTGGAGAGCCAGCCAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR TCA 90 bp CTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTaGCTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTG +
Preference number: 1 (lower is better)
Translates to: LLPALPERCGGLQKC*LLLRGVWLALQRQL
Trigger: CAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR TCA 90 bp GTGGACGTGGACGATTCTTCCAGACTTGGTGGCAGAGTCTCCACCTaGGATTTGTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTG +
Preference number: 1 (lower is better)
Translates to: VDVDDSSRLGGRVST*DLWVLSGSGTVPSL
Trigger: CAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAGAATCGTCCACGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CCA 90 bp GTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTaGCTCTCCAACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCC +
Preference number: 1 (lower is better)
Translates to: VEGFKNADFSSEESG*LSNVSWPERNDWLP
Trigger: GGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CCA 90 bp CTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTTaGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAG +
Preference number: 1 (lower is better)
Translates to: LHRLLARGRGRFFQT*WQSLHLRFVGLVWK
Trigger: CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CCA 90 bp CTGCTCTGCGCTCACGTCCTGCTCAAAGAGCCCAATGTAGAGAACTaGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCCAGGAACCATCC +
Preference number: 1 (lower is better)
Translates to: LLCAHVLLKEPNVEN*QGAVQEVEKSQEPS
Trigger: GGATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAGGACGTGAGCGCAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 90 bp ATGTTGCTCTTCTTGAGACATTTGATGGTTTCAGGGACACCGTCCTaGAGTCTGTCCTCGATGGCTGTGGCTCCCAGCAGCCTGAGGTCC +
Preference number: 1 (lower is better)
Translates to: MLLFLRHLMVSGTPS*SLSSMAVAPSSLRS
Trigger: GGACCTCAGGCTGCTGGGAGCCACAGCCATCGAGGACAGACTCCAGGACGGTGTCCCTGAAACCATCAAATGTCTCAAGAAGAGCAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 90 bp GGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTaGTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGTGAGCACA +
Preference number: 1 (lower is better)
Translates to: GLCLGDNDLSCALGN*SWKDSDSLLLLVST
Trigger: TGTGCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 90 bp GACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTaGTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCT +
Preference number: 1 (lower is better)
Translates to: DLSLVNSNFSGEGGL*LGDNDLSCALGNCS
Trigger: AGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR TCA 90 bp ATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAATTCTTTGACTaGGAAACCGAAGCCGAAGGCCAACACCAGGCAGACAAGCACCAC +
Preference number: 1 (lower is better)
Translates to: MHPREVVVVVFEFFD*ETEAEGQHQADKHH
Trigger: GTGGTGCTTGTCTGCCTGGTGTTGGCCTTCGGCTTCGGTTTCTCAGTCAAAGAATTCAAAGACCACCACTACTACCTCTCGGGGGTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 90 bp TCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTGCTTaGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGA +
Preference number: 1 (lower is better)
Translates to: SPWSTATSQEKVASA*VTMTSPVPLAIALG
Trigger: TCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CCA 90 bp AAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTaGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGA +
Preference number: 1 (lower is better)
Translates to: KACGVLVFRGRPPAC*LTCSRTGWSFFFPG
Trigger: TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 90 bp AGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATaGTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCA +
Preference number: 1 (lower is better)
Translates to: RKACGVLVFRGRPPA*WLTCSRTGWSFFFP
Trigger: TGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CCA 90 bp TGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTaGAAAGACTCAGATAGCCTGTTGCTGCTGGTGAGCACATATTTG +
Preference number: 1 (lower is better)
Translates to: CLGDNDLSCALGNCS*KDSDSLLLLVSTYL
Trigger: CAAATATGTGCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CCA 90 bp CTCTGTGCAACAGTGATTTCTCCTGAAAAGAATGTGACCTCTCCTTaGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTGCTTGGGTG +
Preference number: 1 (lower is better)
Translates to: LCATVISPEKNVTSP*STATSQEKVASAWV
Trigger: CACCCAAGCAGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTTTTCAGGAGAAATCACTGTTGCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR TCA 90 bp TTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGTaGGCACATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAG +
Preference number: 1 (lower is better)
Translates to: LAIALGKTQIACCCW*AHIWGGQVGFLDEE
Trigger: CTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATGTGCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR TCA 90 bp AAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTaGAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCTCACATC +
Preference number: 1 (lower is better)
Translates to: KYSAIRISASTNKGL*KSKEEQWPGVVAHI
Trigger: GATGTGAGCCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR CAA 90 bp CAGATGGCCAGCAGGCGCCAGAACTCCCGCACGGCCTCGTCCCCGTaGGTCCGCACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: QMASRRQNSRTASSP*VRTRCSRAALWKSS
Trigger: GCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGACGAGGCCGTGCGGGAGTTCTGGCGCCTGCTGGCCATCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCGTCCTGGGCTGGCGGTaGAGCCAGCGGGAGCCCGAA +
Preference number: 2 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPVLGWR*SQREPE
Trigger: TTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGAC...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCACGAAGGCGCGCTCCTaGAGCACCTCGGAGCTACGG +
Preference number: 2 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFTKARS*STSELR
Trigger: CCGTAGCTCCGAGGTGCTGCAGGAGCGCGCCTTCGT...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp ATGACCGCCTGGCACTTGGACGCCAGGTCCACGAAGGCGCGCTCCTGCAGCACCGCAGGGACAGGCGCCTaGCGTAGAGGAAATCCCTCC +
Preference number: 2 (lower is better)
Translates to: MTAWHLDARSTKARSCSTAGTGA*RRGNPS
Trigger: GGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGC...GGTGCTGCAGGAGCGCGCCTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
3UTR-3UTR CCA 90 bp CTGGTGGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTGGGAGCTGTACTTCCTaGGAGGACACCTGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: LVVAEAGGSRRVAADPQCGSCTS*EDTCPC
Trigger: ACAGGGGCAGGTGTCCTCCCAGGAAGTACAGCTCCC...ACACTGTGGATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCGGGAGCTGTACTTCCTaGGAGGACACCTGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFGSCTS*EDTCPC
Trigger: ACAGGGGCAGGTGTCCTCCCAGGAAGTACAGCTCCC...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGATCTGGAGTCCTGGGCTaGCGGTGCAGCCAGCGGGAG +
Preference number: 2 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRSGVLG*RCSQRE
Trigger: CTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGA...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGAAGGCTGGCCTCCTGGTaGCGCTGCTGCCAGTCCTCG +
Preference number: 2 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRRLASW*RCCQSS
Trigger: CGAGGACTGGCAGCAGCGCCACCAGGAGGCCAGCCT...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 90 bp TCGATGGCTGTGGCTCCCAGCAGCCTGAGGTCCTGCTCCATCTCGTaGTACACCTGTTGCAGGGCCTGTGCCCGGTTCTGCAGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: SMAVAPSSLRSCSIS*YTCCRACARFCSRR
Trigger: CCTCCTGCTGCAGAACCGGGCACAGGCCCTGCAACAGGTGTACAACGAGATGGAGCAGGACCTCAGGCTGCTGGGAGCCACAGCCATCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCCCTCCTTGGGGGTGTaGGGCTCCTTTTGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFPSLGV*GSFCQL
Trigger: GAGCTGGCAAAAGGAGCCTCACACCCCCAAGGAGGG...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGATCACGCGGCAGCAGATaGCCGCCTGGCACTTGGACG +
Preference number: 2 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRSRGSR*PPGTWT
Trigger: CGTCCAAGTGCCAGGCGGTCATCTGCTGCCGCGTGA...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTGCCCCTGTGGCTGGTaGTTCTTCTTCCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFCPCGW*FFFPRK
Trigger: CTTCCTGGGGAAGAAGAAGCACCAGCCACAGGGGCA...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR GCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATACGAAGGCGCGCTCCTaGAGCACCTCGGAGCTACGG +
Preference number: 2 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHTKARS*STSELR
Trigger: CCGTAGCTCCGAGGTGCTGCAGGAGCGCGCCTTCGT...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR GCA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGATCTGAACTGCCTGCATaGCCTCCTGGCCCGCCAGCC +
Preference number: 2 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRSELPA*PPGPPA
Trigger: GGCTGGCGGGCCAGGAGGGCATGCAGGCAGTTCAGA...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCTCCGCAGAGGGCAATaGCTGCTCCTCTGGGGGCAA +
Preference number: 2 (lower is better)
Translates to: GGAAGSRTGRARSRCSELLRRGQ*LLLWGQ
Trigger: TTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAG...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp TCCCCGTTGGTCCGCACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCTTCCCCCTGCATGCTGGTTaGCTTGCAGCAGAACTGGCT +
Preference number: 2 (lower is better)
Translates to: SPLVRTRCSRAALWKSSFPLHAG*LAAELA
Trigger: AGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGG...GAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTTCACGCGGCAGCAGATaGCCGCCTGGCACTTGGACG +
Preference number: 2 (lower is better)
Translates to: GSRTGRARSRCSELPACPSRGSR*PPGTWT
Trigger: CGTCCAAGTGCCAGGCGGTCATCTGCTGCCGCGTGA...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR GCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGGTCCTGGGCTGGCGGTaGAGCCAGCGGGAGCCCGAA +
Preference number: 2 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEEVLGWR*SQREPE
Trigger: TTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGAC...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCTCCGAGGAGTCTGGCTaGCTCTCCAACGTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSSEESG*LSNVSW
Trigger: CCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGA...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCGGTCTTGTCTGGAAGTaGCACCGTCCCCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFGLVWK*HRPLLG
Trigger: CCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACC...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp CAGAGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAACGGGCTCTGGAGTCCTaGGCTGGCGGTGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: QRGGHTMGDGLDEDPVVERALES*AGGAAS
Trigger: GCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCG...TTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp CCTCCGCAGAATTGTGCCCTGAGTGATGAGGTTTGCATATCCCTCACGGTGGGACGGGCTCTGGAGTCCTaGGCTGGCGGTGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: PPQNCALSDEVCISLTVGRALES*AGGAAS
Trigger: GCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCG...TCCCACCGTGAGGGATATGCAAACCTCATCACTCAGGGCACAATTCTGCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATCAGCAGATGACCGCCTaGCACTTGGACGCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHQQMTA*HLDARS
Trigger: GGACCTGGCGTCCAAGTGCCAGGCGGTCATCTGCTG...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGATGCTGGGCTCCGTGCTaGCCAGCAAGAGCATGTCGG +
Preference number: 2 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRCWAPC*PARACR
Trigger: CCGACATGCTCTTGCTGGCCAGCACGGAGCCCAGCA...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTaGACCAGAGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAG +
Preference number: 2 (lower is better)
Translates to: AGPAVSRLIHSVMKK*TREVVTPWAMAWTK
Trigger: CTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCTCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAAGCCATTTCTTCTGCTTaGAGCTGCGGGGAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: CGHAAPMHPREVVVVVFEAISSA*SCGERG
Trigger: CCCCCTCTCCCCGCAGCTTCAAGCAGAAGAAATGGC...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp CTCCCGGTGTACATGAGGCAAGGGCTCCATGGTGAAAATCTCCTCGCTGGGGCCGTCGCTGTTCTGAACTaGCTGCATGCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LPVYMRQGLHGENLLAGAVAVLN*LHALLA
Trigger: GGCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGAC...GGCCCCAGCGAGGAGATTTTCACCATGGAGCCCTTGCCTCATGTACACCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGTGCAGGAAGCAGAACTaGCCGAGCACGAAGTCGCTG +
Preference number: 2 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSACRKQN*PSTKSL
Trigger: CAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCA...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp CTCCCGGTGTACATGAGGCAAGGGCTCCATGGTGAAAATCTCCTCGCTGGGGCCATCGTGACGGTGTCCTaGGTGCGGGACAGGAACACG +
Preference number: 2 (lower is better)
Translates to: LPVYMRQGLHGENLLAGAIVTVS*VRDRNT
Trigger: CGTGTTCCTGTCCCGCACCCAGGACACCGTCACGAT...GGCCCCAGCGAGGAGATTTTCACCATGGAGCCCTTGCCTCATGTACACCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp AAGATGACTCGGAGGGCCAGGACAGGGAAGGTGTTTATGGACACACTCAGCAGGTCGGGTCGTGGCCTCTaGATCCGGCCCATAGACGCG +
Preference number: 2 (lower is better)
Translates to: KMTRRARTGKVFMDTLSRSGRGL*IRPIDA
Trigger: CGCGTCTATGGGCCGGATTCAGAGGCCACGACCCGA...CCTGCTGAGTGTGTCCATAAACACCTTCCCTGTCCTGGCCCTCCGAGTCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGTCTGAACTGCCTGCATaGCCTCCTGGCCCGCCAGCC +
Preference number: 2 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEESELPA*PPGPPA
Trigger: GGCTGGCGGGCCAGGAGGGCATGCAGGCAGTTCAGA...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR GCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGTAGCGCAGGAACTTaGAGATCCGCACGTAGGACC +
Preference number: 2 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSSSAGT*RSARRT
Trigger: GGTCCTACGTGCGGATCTGCAAGTTCCTGCGCTACT...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGAAGAGCTCGTCCTTCTaGCCCACCACGTACAGCTCC +
Preference number: 2 (lower is better)
Translates to: GGAAGSRTGRARSRCSELKSSSF*PTTYSS
Trigger: GGAGCTGTACGTGGTGGGGCAGAAGGACGAGCTCTT...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR GCA 90 bp CTGGTGGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTATGTCGGGAATGCTCTaGAGGATGATGATGATGAGG +
Preference number: 2 (lower is better)
Translates to: LVVAEAGGSRRVAADPQCMSGML*RMMMMR
Trigger: CCTCATCATCATCATCCTGCAGAGCATTCCCGACAT...ACACTGTGGATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCCTGAAAGAAATGACTaGCTCCCCAGAGGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFPERND*LPRGCG
Trigger: GCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGG...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp ATACAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATAGAGGAAATCCCTCCTaGACTGGCCGAGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: IQGLAGEAVVAGKPDLHHRGNPS*TGRAPA
Trigger: GGCAGGAGCTCGGCCAGTCCAGGAGGGATTTCCTCT...ATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526847.1
3UTR-3UTR CCA 90 bp CCATTCCAGGCACCCCACGAAGTGGTGCATCCGACTGTTAGGCGCCTCACACGTAGGGTCACCACCTGGTaGTACTTCTTGACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: PFQAPHEVVHPTVRRLTRRVTTW*YFLTRA
Trigger: GGCCCTGGTCAAGAAGTACCACCAGGTGGTGACCCT...ACGTGTGAGGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCTGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp AAGATGACTCGGAGGGCCAGGACAGGGAAGGTGTTTATGGACACACTCAGCAGGTCTGCAGCAGGAGGCTaGCCTCCTGGTGGCGCTGCT +
Preference number: 2 (lower is better)
Translates to: KMTRRARTGKVFMDTLSRSAAGG*PPGGAA
Trigger: AGCAGCGCCACCAGGAGGCCAGCCTCCTGCTGCAGA...CCTGCTGAGTGTGTCCATAAACACCTTCCCTGTCCTGGCCCTCCGAGTCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCGGGCTTCAAAAATGCTaGCTTCTCCTCCGAGGAGTC +
Preference number: 2 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSGLQKC*LLLRGV
Trigger: GACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCC...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTGGGCTTCAAAAATGCTaGCTTCTCCTCCGAGGAGTC +
Preference number: 2 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLGLQKC*LLLRGV
Trigger: GACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCC...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAACCTGATATGCCAGCGTaGCTCCTTTGGGCTCGAAGA +
Preference number: 2 (lower is better)
Translates to: CGHAAPMHPREVVVVVFEPDMPA*LLWARR
Trigger: TCTTCGAGCCCAAAGGAGTCACGCTGGCATATCAGG...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAACCATCAGGGCCTGTCTaGACTTCAAGTTGGTCTCCC +
Preference number: 2 (lower is better)
Translates to: CGHAAPMHPREVVVVVFEPSGPV*TSSWSP
Trigger: GGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGG...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTTGCCCCTGTGGCTGGTaGTTCTTCTTCCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSCPCGW*FFFPRK
Trigger: CTTCCTGGGGAAGAAGAAGCACCAGCCACAGGGGCA...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR GCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGACGATCAGGGCCTTCTaGTTGGGCGTCACGCGGCAG +
Preference number: 2 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEETIRAF*LGVTRQ
Trigger: CTGCCGCGTGACGCCCAAGCAGAAGGCCCTGATCGT...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp CTCCCGGTGTACATGAGGCAAGGGCTCCATGGTGAAAATCTCCTCGCTGGGGCCGCTCGCTCGTGGACGTaGACGATTCTTCCAGACTTG +
Preference number: 2 (lower is better)
Translates to: LPVYMRQGLHGENLLAGAARSWT*TILPDL
Trigger: CAAGTCTGGAAGAATCGTCCACGTCCACGAGCGAGC...GGCCCCAGCGAGGAGATTTTCACCATGGAGCCCTTGCCTCATGTACACCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTAGGGTCACCACCTGGTaGTACTTCTTGACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GSRTGRARSRCSELPACPRVTTW*YFLTRA
Trigger: GGCCCTGGTCAAGAAGTACCACCAGGTGGTGACCCT...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp ATACAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATGCCAGGGTCACCACCTaGTGGTACTTCTTGACCAGG +
Preference number: 2 (lower is better)
Translates to: IQGLAGEAVVAGKPDLHHARVTT*WYFLTR
Trigger: CCTGGTCAAGAAGTACCACCAGGTGGTGACCCTGGC...ATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATTCACACCATGGGCGATaGCTTGGACGAAGACCCAGT +
Preference number: 2 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHSHHGR*LGRRPS
Trigger: ACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGA...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp CCGGCTTCTCCAGGCTCTGCTCTGCGCTCACGTCCTGCTCAAAGAGCCCAATGTAGGTTGGACACGCGGTaGAACTGCTCGTACAGGTTC +
Preference number: 2 (lower is better)
Translates to: PASPGSALRSRPAQRAQCRLDTR*NCSYRF
Trigger: GAACCTGTACGAGCAGTTCCACCGCGTGTCCAACCT...ACATTGGGCTCTTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATAGAACCAGGGCAGCGTaGAGATGTCGGGAATGCTCT +
Preference number: 2 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHRTRAA*RCRECS
Trigger: AGAGCATTCCCGACATCTCCACGCTGCCCTGGTTCT...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGGGAGTCTGTCCTCGATaGCTGTGGCTCCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEEGVCPR*LWLPAA
Trigger: GGCTGCTGGGAGCCACAGCCATCGAGGACAGACTCC...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp CCGGCTTCTCCAGGCTCTGCTCTGCGCTCACGTCCTGCTCAAAGAGCCCAATGTGGCAGAGTCTCCACCTaGGATTTGTGGGTCTTGTCT +
Preference number: 2 (lower is better)
Translates to: PASPGSALRSRPAQRAQCGRVST*DLWVLS
Trigger: AGACAAGACCCACAAATCTCAGGTGGAGACTCTGCC...ACATTGGGCTCTTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp AGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTCCTGGCGGCAGGGTCTGTTGTTaGTGGCTCTGTCACTCTTGT +
Preference number: 2 (lower is better)
Translates to: RTGRARSRCSELPACPPGGRVCC*WLCHSC
Trigger: ACAAGAGTGACAGAGCCATCAACAACAGACCCTGCC...GCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTGGAGAAGGTGGCCTCTaGTTGGGTGACAATGACCTC +
Preference number: 2 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSGEGGL*LGDNDL
Trigger: GAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCC...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR GCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGCCGAGCCCTAAGCTCTaGAAGGGTTCGCCATCAGGG +
Preference number: 2 (lower is better)
Translates to: LFRNGVEGFKNADFSSEEPSPKL*KGSPSG
Trigger: CCCTGATGGCGAACCCTTGCAGAGCTTAGGGCTCGG...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCCCCAGAGGCTGTGGCTaGCTCTCAAATGACGACAGC +
Preference number: 2 (lower is better)
Translates to: GVEGFKNADFSSEESGWLPRGCG*LSNDDS
Trigger: GCTGTCGTCATTTGAGAGCCAGCCACAGCCTCTGGG...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp TGGGTGACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCCTCCTCCGAGGAGTCTaGCTGGCTCTCCAACGTCAG +
Preference number: 2 (lower is better)
Translates to: WVTIRACLNFKLVSPSMSLLRGV*LALQRQ
Trigger: CTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAG...GGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGTCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 90 bp CCGGTTCCTGTCGGACTCTTCCCCATCAGAATCTGGCAGGGTCTGTaGTTGATGGCTCTGTCACTCTTGTGTCTCCCCATGTCGTCCACC +
Preference number: 2 (lower is better)
Translates to: PVPVGLFPIRIWQGL*LMALSLLCLPMSST
Trigger: GGTGGACGACATGGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGATGGGGAAGAGTCCGACAGGAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 90 bp CTGCAGCCTCGGAGGAGGAGGTTGCCAATGTCCAGGGAGTATTTCTaGTCATTCCATTCCAGGCACCCCACGAAGTGGTGCATCCGACTG +
Preference number: 2 (lower is better)
Translates to: LQPRRRRLPMSREYF*SFHSRHPTKWCIRL
Trigger: CAGTCGGATGCACCACTTCGTGGGGTGCCTGGAATGGAATGACAAGAAATACTCCCTGGACATTGGCAACCTCCTCCTCCGAGGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAAGCCTGTTGCTGCTGGTaGGCACATATTTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GVRLLLPALPERCGGLQKACCCW*AHIWGG
Trigger: CCCTCCCCAAATATGTGCTCACCAGCAGCAACAGGC...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGACGAAGTCGCTGTTCTaGACTGCCTGCATGCCCTCC +
Preference number: 2 (lower is better)
Translates to: LFRNGVEGFKNADFSSEETKSLF*TACMPS
Trigger: GGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGT...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATAGACCTGCACCATCATaGTGGCCATGCTCTTGTAGA +
Preference number: 2 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHRPAPS*WPCSCR
Trigger: TCTACAAGAGCATGGCCAGCATGATGGTGCAGGTCT...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR GCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGCTCCAGGCTCTGCTCTaGGCTCACGTCCTGCTCAAA +
Preference number: 2 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEELQALL*AHVLLK
Trigger: TTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAG...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCCTTGGCAATTGCTCTTaGAAAGACTCAGATAGCCTG +
Preference number: 2 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPLGNCS*KDSDSL
Trigger: CAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAG...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGATCTTCCGGAACGGTGTaGAGGGCTTCAAAAATGCTG +
Preference number: 2 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRSSGTV*RASKML
Trigger: CAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGA...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAACCTGCACCATCATGCTaGCCATGCTCTTGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: CGHAAPMHPREVVVVVFEPAPSC*PCSCRR
Trigger: TCTTCTACAAGAGCATGGCCAGCATGATGGTGCAGG...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 90 bp GTTCCTGTCGGACTCTTCCCCATCAGAATCTGGCAGGGTCTGTTGTaGATGGCTCTGTCACTCTTGTGTCTCCCCATGTCGTCCACCAGG +
Preference number: 2 (lower is better)
Translates to: VPVGLFPIRIWQGLL*MALSLLCLPMSSTR
Trigger: CCTGGTGGACGACATGGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGATGGGGAAGAGTCCGACAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCGCCTGTTGCTGCTGGTaGGCACATATTTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: FKNADFSSEESGWLSNVSACCCW*AHIWGG
Trigger: CCCTCCCCAAATATGTGCTCACCAGCAGCAACAGGC...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTCCCTCCTTGGGGGTGTaGGGCTCCTTTTGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSPSLGV*GSFCQL
Trigger: GAGCTGGCAAAAGGAGCCTCACACCCCCAAGGAGGG...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCACAGGGGCTGGCCGGTaGAGCCGTTGTAGCAGGCAA +
Preference number: 2 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSTGAGR*SRCSRQ
Trigger: TTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGT...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR GCA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGACAAACGCCTAATGAATaGAGGCCCGGTTCCTGTCGG +
Preference number: 2 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGQTPNE*RPGSCR
Trigger: CCGACAGGAACCGGGCCTGCATTCATTAGGCGTTTG...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTCTCTCCAACGTCAGCTaGCCTGAAAGAAATGACTGG +
Preference number: 2 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTLSNVS*PERNDW
Trigger: CCAGTCATTTCTTTCAGGCCAGCTGACGTTGGAGAG...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp AGCAGGGACAGGCGCCAGGAAGTCTCCGTTAATGACCAAGGCCAGCTTGACCTGCTCTCCAACGTCAGCTaGCCTGAAAGAAATGACTGG +
Preference number: 2 (lower is better)
Translates to: SRDRRQEVSVNDQGQLDLLSNVS*PERNDW
Trigger: CCAGTCATTTCTTTCAGGCCAGCTGACGTTGGAGAG...CAGGTCAAGCTGGCCTTGGTCATTAACGGAGACTTCCTGGCGCCTGTCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAATCCGAGGAGTCTGGCTaGCTCTCCAACGTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LPDLVAESPPEICGSCLESEESG*LSNVSW
Trigger: CCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGA...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp AGCAGGGACAGGCGCCAGGAAGTCTCCGTTAATGACCAAGGCCAGCTTGACCTGTTCTTCCAGACTTGGTaGCAGAGTCTCCACCTGAGA +
Preference number: 2 (lower is better)
Translates to: SRDRRQEVSVNDQGQLDLFFQTW*QSLHLR
Trigger: TCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAGAA...CAGGTCAAGCTGGCCTTGGTCATTAACGGAGACTTCCTGGCGCCTGTCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGTTCCCCATCAGAATCTaGCAGGGTCTGTTGTTGATG +
Preference number: 2 (lower is better)
Translates to: GGAAGSRTGRARSRCSELFPIRI*QGLLLM
Trigger: CATCAACAACAGACCCTGCCAGATTCTGATGGGGAA...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 90 bp GAGAAGGTGGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTaGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: EKVASAWVTMTSPVP*AIALGKTQIACCCW
Trigger: CCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CAA 90 bp CTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTGCTaGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: LSLVNSNFSGEGGLC*GDNDLSCALGNCSW
Trigger: CCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTGGTTGGTTTTCTGGATaGAGAGCGGATTGTCTATCC +
Preference number: 2 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTGWFSG*RADCLS
Trigger: GGATAGACAATCCGCTCTTCATCCAGAAAACCAACC...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAACGAAGTCGCTGTTCTaGACTGCCTGCATGCCCTCC +
Preference number: 2 (lower is better)
Translates to: LLKEPNVENWQGAVQEVETKSLF*TACMPS
Trigger: GGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGT...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR GCA 90 bp AGAGGCTGTGGCTGGCTCTCAAATGACGACAGCTGGCTTTCTCTGTGCAACAGTGGAGAAGGTGGCCTCTaGTTGGGTGACAATGACCTC +
Preference number: 2 (lower is better)
Translates to: RGCGWLSNDDSWLSLCNSGEGGL*LGDNDL
Trigger: GAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCC...ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGAGAGCCAGCCACAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTACCTGCCCCTGTGGCTaGTGCTTCTTCTTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSTCPCG*CFFFPR
Trigger: CCTGGGGAAGAAGAAGCACCAGCCACAGGGGCAGGT...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGCCCAGAGGCTGTGGCTaGCTCTCAAATGACGACAGC +
Preference number: 2 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKPRGCG*LSNDDS
Trigger: GCTGTCGTCATTTGAGAGCCAGCCACAGCCTCTGGG...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGTGCTGTACAGGAGGTTaGAAAGAGCCAGGAACCATC +
Preference number: 2 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEECCTGG*KEPGTI
Trigger: GATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCA...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR TCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAACGAAGACCCAGTAGTTaGAGAGCTCGTCCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: LPDLVAESPPEICGSCLERRPSS*RARPSA
Trigger: GGCAGAAGGACGAGCTCTTCAACTACTGGGTCTTCG...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGGCAGGCAGATCACCTaGAGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: PQIKACESQKKSSGRVWWGRQIT*SQEFET
Trigger: GGTCTCGAACTCCTGACTTCAGGTGATCTGCCTGCC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR-3UTR GCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGAGACCTGCACCATCATaGTGGCCATGCTCTTGTAGA +
Preference number: 2 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEERPAPS*WPCSCR
Trigger: TCTACAAGAGCATGGCCAGCATGATGGTGCAGGTCT...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAACCTGCCCCTGTGGCTaGTGCTTCTTCTTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRTCPCG*CFFFPR
Trigger: CCTGGGGAAGAAGAAGCACCAGCCACAGGGGCAGGT...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGCTCGCTCGTGGACGTaGACGATTCTTCCAGACTTG +
Preference number: 2 (lower is better)
Translates to: LPDLVAESPPEICGSCLEARSWT*TILPDL
Trigger: CAAGTCTGGAAGAATCGTCCACGTCCACGAGCGAGC...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGCCTGCACCATCATGCTaGCCATGCTCTTGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEEPAPSC*PCSCRR
Trigger: TCTTCTACAAGAGCATGGCCAGCATGATGGTGCAGG...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTGAGGTGGTCACACCATaGGCGATGGCTTGGACGAAG +
Preference number: 2 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGEVVTP*AMAWTK
Trigger: CTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTC...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTCCTGAAAGAAATGACTaGCTCCCCAGAGGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSPERND*LPRGCG
Trigger: GCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGG...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 90 bp TCCTGTGCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTaGCTGCTGGTGAGCACATATTTGGGGAGGGCAGGTTGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: SCALGNCSWKDSDSL*LLVSTYLGRAGWFS
Trigger: AGAAAACCAACCTGCCCTCCCCAAATATGTGCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGTAATTCCAGTGCTTTaGAAAGCGGAGGCAGGCGGA +
Preference number: 2 (lower is better)
Translates to: PQIKACESQKKSSGRVWWVIPVL*KAEAGG
Trigger: TCCGCCTGCCTCCGCTTTTCAAAGCACTGGAATTAC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR-3UTR CCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCAAATGACGACAGCTaGCTTTCTCTGTGCAACAGT +
Preference number: 2 (lower is better)
Translates to: LFRNGVEGFKNADFSSEESNDDS*LSLCNS
Trigger: ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGA...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CCA 90 bp AGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTGTCTTCCGGAACGGTGTaGAGGGCTTCAAAAATGCTG +
Preference number: 2 (lower is better)
Translates to: RKACGVLVFRGRPPACWLSSGTV*RASKML
Trigger: CAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGA...CAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR GCA 90 bp ATGGATCTTGCCACAGTTCTTCATAATTTTTGTGTCAAAACCAGCATAAATGACGGAGGCCCCTCCCTCTaGCAACCCTCCCCACACCGG +
Preference number: 2 (lower is better)
Translates to: MDLATVLHNFCVKTSINDGGPSL*QPSPHR
Trigger: CCGGTGTGGGGAGGGTTGGCAGAGGGAGGGGCCTCC...GTCATTTATGCTGGTTTTGACACAAAAATTATGAAGAACTGTGGCAAGATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGGCAGGTTGGTTTTCTaGATGAAGAGCGGATTGTCT +
Preference number: 2 (lower is better)
Translates to: LPDLVAESPPEICGSCLEGRLVF*MKSGLS
Trigger: AGACAATCCGCTCTTCATCCAGAAAACCAACCTGCC...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGGCTGCAATAAGCTATaGTTGCACCACTGCATTCCA +
Preference number: 2 (lower is better)
Translates to: PQIKACESQKKSSGRVWWGCNKL*LHHCIP
Trigger: TGGAATGCAGTGGTGCAATCATAGCTTATTGCAGCC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR-3UTR TCA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCACTTGGCCGTGCGGATaGCATTGGTCTTGTATTTCT +
Preference number: 2 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSTWPCG*HWSCIS
Trigger: AGAAATACAAGACCAATGTCATCCGCACGGCCAAGT...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp CATAATTTTTGTGTCAAAACCAGCATAAATGACCAGTCCATAGCAGGTGTCTGTACGATCAGGGCCTTCTaGTTGGGCGTCACGCGGCAG +
Preference number: 2 (lower is better)
Translates to: HNFCVKTSINDQSIAGVCTIRAF*LGVTRQ
Trigger: CTGCCGCGTGACGCCCAAGCAGAAGGCCCTGATCGT...ACAGACACCTGCTATGGACTGGTCATTTATGCTGGTTTTGACACAAAAATTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp CATAATTTTTGTGTCAAAACCAGCATAAATGACCAGTCCATAGCAGGTGTCTGTCCACATAGCACAGGCTaGTGGGCTCCGTGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: HNFCVKTSINDQSIAGVCPHSTG*WAPCWP
Trigger: TGGCCAGCACGGAGCCCAGCAGCCTGTGCTATGTGG...ACAGACACCTGCTATGGACTGGTCATTTATGCTGGTTTTGACACAAAAATTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR TCA 90 bp CATAATTTTTGTGTCAAAACCAGCATAAATGACCAGTCCATAGCAGGTGTCTGTCCTGGTGGTACTTCTTaGCCAGGGCCACGATCAGGG +
Preference number: 2 (lower is better)
Translates to: HNFCVKTSINDQSIAGVCPGGTS*PGPRSG
Trigger: CCCTGATCGTGGCCCTGGTCAAGAAGTACCACCAGG...ACAGACACCTGCTATGGACTGGTCATTTATGCTGGTTTTGACACAAAAATTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTTGTGCCCTTGGCAATTaGTCTTGGAAAGACTCAGAT +
Preference number: 2 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSCALGN*SWKDSD
Trigger: ATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACA...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR GCA 90 bp ATGGATCTTGCCACAGTTCTTCATAATTTTTGTGTCAAAACCAGCATAAATGACGGACGATGTTGTCCTTaGGGAGACAGACCACATCCC +
Preference number: 2 (lower is better)
Translates to: MDLATVLHNFCVKTSINDGRCCP*GDRPHP
Trigger: GGGATGTGGTCTGTCTCCGCAAGGACAACATCGTCC...GTCATTTATGCTGGTTTTGACACAAAAATTATGAAGAACTGTGGCAAGATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTATTAGCCAGGCGGGGTaGCACGCAACTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: RNTQQFEFQHPQIKACESISQAG*HATVIP
Trigger: TGGGATTACAGTTGCGTGCCACCCCGCCTGGCTAAT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGTAGTCCCGGCTACTTaGGAAGCTGAAGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: RNTQQFEFQHPQIKACESVVPAT*EAEVGG
Trigger: TCCTCCCACTTCAGCTTCCCAAGTAGCCGGGACTAC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR-3UTR GCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGTGGTGGCTCATGCCTaGAATGCCAATATTTTGGAG +
Preference number: 2 (lower is better)
Translates to: RNTQQFEFQHPQIKACESVVAHA*NANILE
Trigger: CTCCAAAATATTGGCATTGCAGGCATGAGCCACCAC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGCAATGCCAATATTTTaGAGGCTGAGGCAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: RNTQQFEFQHPQIKACESAMPIF*RLRQAD
Trigger: ATCTGCCTGCCTCAGCCTCCAAAATATTGGCATTGC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR-3UTR GCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGCAATAAGCTATGATTaGACCACTGCATTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: RNTQQFEFQHPQIKACESAISYD*TTAFQP
Trigger: AGGCTGGAATGCAGTGGTGCAATCATAGCTTATTGC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR GCA 72 bp GGTGCGGGACAGGAACACGTAGCCGAAGTTCCGGGCTaGGGTGACCAGCGCCCCCTCGTCGGGGGAGGCCGC +
Preference number: 3 (lower is better)
Translates to: GAGQEHVAEVPG*GDQRPLVGGGR
Trigger: GCGGCCTCCCCCGACGAGGGGGCGCTGGTCACCGCAGCCCGGAACTTCGGCTACGTGTTCCTGTCCCGCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp CACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTaGCGGTGCAGCCAGCGGGAGCCCGAACCTCCGGCA +
Preference number: 3 (lower is better)
Translates to: HLGATAGSGVLG*RCSQREPEPPA
Trigger: TGCCGGAGGTTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 72 bp TGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTaGGCTGGCGGTGCAGCCAGCGGGAGCCCGAACCTC +
Preference number: 3 (lower is better)
Translates to: CSTSELRRALES*AGGAASGSPNL
Trigger: GAGGTTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 72 bp GGGCGCTCACGGGGGCTCTCCCGCACCATCACCGTGTaGCAGATGGCCAGCAGGCGCCAGAACTCCCGCACG +
Preference number: 3 (lower is better)
Translates to: GRSRGLSRTITV*QMASRRQNSRT
Trigger: CGTGCGGGAGTTCTGGCGCCTGCTGGCCATCTGCCACACGGTGATGGTGCGGGAGAGCCCCCGTGAGCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp GCAGGCGCCAGAACTCCCGCACGGCCTCGTCCCCGTTaGTCCGCACGAGGTGCAGCAGGGCCGCATTGTGGA +
Preference number: 3 (lower is better)
Translates to: AGARTPARPRPR*SARGAAGPHCG
Trigger: TCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGACGAGGCCGTGCGGGAGTTCTGGCGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp CACGGGGGCTCTCCCGCACCATCACCGTGTGGCAGATaGCCAGCAGGCGCCAGAACTCCCGCACGGCCTCGT +
Preference number: 3 (lower is better)
Translates to: HGGSPAPSPCGR*PAGARTPARPR
Trigger: ACGAGGCCGTGCGGGAGTTCTGGCGCCTGCTGGCCATCTGCCACACGGTGATGGTGCGGGAGAGCCCCCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 72 bp TGGCACTTGGACGCCAGGTCCACGAAGGCGCGCTCCTaGAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCC +
Preference number: 3 (lower is better)
Translates to: WHLDARSTKARS*STSELRRALES
Trigger: GGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGCCTTCGTGGACCTGGCGTCCAAGTGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR GCA 72 bp TCCCGCACGGCCTCGTCCCCGTTGGTCCGCACGAGGTaGAGCAGGGCCGCATTGTGGAAGAGCAGCTTCCCG +
Preference number: 3 (lower is better)
Translates to: SRTASSPLVRTR*SRAALWKSSFP
Trigger: CGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGACGAGGCCGTGCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp GGAGCCCGAACCTCCGGCACAGCAGGGACAGGCGCCTaGCGTAGAGGAAATCCCTCCTGGACTGGCCGAGCT +
Preference number: 3 (lower is better)
Translates to: GARTSGTAGTGA*RRGNPSWTGRA
Trigger: AGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTGTGCCGGAGGTTCGGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
3UTR CCA 72 bp AGCAGGCAAGACAGGGCCACCACGACCGCAAAGGACTaGTGGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCG +
Preference number: 3 (lower is better)
Translates to: SRQDRATTTAKD*WSLKLAGPAVS
Trigger: CGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAGTCCTTTGCGGTCGTGGTGGCCCTGTCTTGCCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp GCAGGGACAGGCGCCTGGCGTAGAGGAAATCCCTCCTaGACTGGCCGAGCTCCTGCCACGCCTCGTCCATGT +
Preference number: 3 (lower is better)
Translates to: AGTGAWRRGNPS*TGRAPATPRPC
Trigger: ACATGGACGAGGCGTGGCAGGAGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
3UTR-3UTR CAA 90 bp ATGACCGCCTGGCACTTGGACGCCAGGTCCACGAAGGCGCGCTCCTGCAGCACCTCGGCTGGGACGATGTaGTCCTTGCGGAGACAGACC +
Preference number: 3 (lower is better)
Translates to: MTAWHLDARSTKARSCSTSAGTM*SLRRQT
Trigger: GGTCTGTCTCCGCAAGGACAACATCGTCCCAGCCGA...GGTGCTGCAGGAGCGCGCCTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp CGCCTGGTACAACAGCTGGTCTGGGCGCTCACGGGGGCTCTCCCGCACCATCACATCATGTTGATGTCGTaGGCACCGTCCCCGATGGCC +
Preference number: 3 (lower is better)
Translates to: RLVQQLVWALTGALPHHHIMLMS*APSPMA
Trigger: GGCCATCGGGGACGGTGCCAACGACATCAACATGAT...GTGATGGTGCGGGAGAGCCCCCGTGAGCGCCCAGACCAGCTGTTGTACCAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp CTGGTGGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTTGCCATTTCTTCTGCTaGAAGCTGCGGGGAGAGGGG +
Preference number: 3 (lower is better)
Translates to: LVVAEAGGSRRVAADPQCCHFFC*KLRGEG
Trigger: CCCCTCTCCCCGCAGCTTCAAGCAGAAGAAATGGCA...ACACTGTGGATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 72 bp GAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTaGTCCTCCCCGGGCACCAGCAGCCACTCCATGGAT +
Preference number: 3 (lower is better)
Translates to: EGNDCSSGGKDS*SSPGTSSHSMD
Trigger: ATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 72 bp TTTCCTTGTCCTCCCCATCGCCCGAGCCCTAAGCTCTaGAAGGGTTCGCCATCAGGGCCTCGGCCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: FPCPPHRPSPKL*KGSPSGPRPLS
Trigger: GGACAGAGGCCGAGGCCCTGATGGCGAACCCTTGCAGAGCTTAGGGCTCGGGCGATGGGGAGGACAAGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 72 bp CTGCTCCATCTCGTTGTACACCTGTTGCAGGGCCTGTaGCCGGTTCTGCAGCAGGAGGCTGGCCTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: LLHLVVHLLQGL*PVLQQEAGLLV
Trigger: CACCAGGAGGCCAGCCTCCTGCTGCAGAACCGGGCACAGGCCCTGCAACAGGTGTACAACGAGATGGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp CCGTTGGTCCGCACGAGGTGCAGCAGGGCCGCATTGTaGAAGAGCAGCTTCCCGTCGGCGAACTTGTTCCAG +
Preference number: 3 (lower is better)
Translates to: PLVRTRCSRAAL*KSSFPSANLFQ
Trigger: CTGGAACAAGTTCGCCGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp CTGGTGGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTACCATGGGCGATGGCTaGGACGAAGACCCAGTAGTT +
Preference number: 3 (lower is better)
Translates to: LVVAEAGGSRRVAADPQCTMGDG*DEDPVV
Trigger: AACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGT...ACACTGTGGATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGGGTGTGAGGCTCCTTTaGCCAGCTCTTCCGGAACGG +
Preference number: 3 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSAGVRLL*PALPER
Trigger: CCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 72 bp TGCCCCACCACGTACAGCTCCGGCTTCTCCAGGCTCTaGTCTGCGCTCACGTCCTGCTCAAAGAGCCCAATG +
Preference number: 3 (lower is better)
Translates to: CPTTYSSGFSRL*SALTSCSKSPM
Trigger: CATTGGGCTCTTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCCGGAGCTGTACGTGGTGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR GCA 72 bp GGCCTCTGTCCTCGTCCCGGCCAAACGCCTAATGAATaGAGGCCCGGTTCCTGTCGGACTCTTCCCCATCAG +
Preference number: 3 (lower is better)
Translates to: GLCPRPGQTPNE*RPGSCRTLPHQ
Trigger: CTGATGGGGAAGAGTCCGACAGGAACCGGGCCTGCATTCATTAGGCGTTTGGCCGGGACGAGGACAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGATGACCAAGGCCAGCTaGACCTGCGACAGGGACTCC +
Preference number: 3 (lower is better)
Translates to: GGAAGSRTGRARSRCSELMTKAS*TCDRDS
Trigger: GGAGTCCCTGTCGCAGGTCAAGCTGGCCTTGGTCAT...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 72 bp TGCTTCTCCGCGGGCCACAGCTCCACCTCCATAGGCTaGTCGCTCGTGGACGTGGACGATTCTTCCAGACTT +
Preference number: 3 (lower is better)
Translates to: CFSAGHSSTSIG*SLVDVDDSSRL
Trigger: AAGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCGGAGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 72 bp AGCTCCAGAAGACGAAGAAGGACTCTGCGGCCACGCTaGTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGT +
Preference number: 3 (lower is better)
Translates to: SSRRRRRTLRPR*SHAPPRGSSGG
Trigger: ACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCAGAGTCCTTCTTCGTCTTCTGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTGCGGTCTTGATCATGTaGATGTCGTTGGCACCGTCC +
Preference number: 3 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLAVLIM*MSLAPS
Trigger: GGACGGTGCCAACGACATCAACATGATCAAGACCGC...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGCCCACGTCCGCGGTCTaGATCATGTTGATGTCGTTG +
Preference number: 3 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSAPTSAV*IMLMSL
Trigger: CAACGACATCAACATGATCAAGACCGCGGACGTGGG...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp CCATTCCAGGCACCCCACGAAGTGGTGCATCCGACTGTTAGGCGCCTCACACGTGGGACGATGTTGTCCTaGCGGAGACAGACCACATCC +
Preference number: 3 (lower is better)
Translates to: PFQAPHEVVHPTVRRLTRGTMLS*RRQTTS
Trigger: GGATGTGGTCTGTCTCCGCAAGGACAACATCGTCCC...ACGTGTGAGGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCTGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR TCA 72 bp GAGACTCCCGGTGTACATGAGGCAAGGGCTCCATGGTaGAAATCTCCTCGCTGGGGCCCTCCTCCACCTTCT +
Preference number: 3 (lower is better)
Translates to: ETPGVHEARAPW*KSPRWGPPPPS
Trigger: AGAAGGTGGAGGAGGGCCCCAGCGAGGAGATTTTCACCATGGAGCCCTTGCCTCATGTACACCGGGAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 72 bp TTGCGGAGACAGACCACATCCCCCACGCACAGATCCTaGCATTTCTTCTGCTTGAAGCTGCGGGGAGAGGGG +
Preference number: 3 (lower is better)
Translates to: LRRQTTSPTHRS*HFFCLKLRGEG
Trigger: CCCCTCTCCCCGCAGCTTCAAGCAGAAGAAATGGCAGGATCTGTGCGTGGGGGATGTGGTCTGTCTCCGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 72 bp CCAGCAAGAGCATGTCGGCTGGGACGATGTTGTCCTTaGGGAGACAGACCACATCCCCCACGCACAGATCCT +
Preference number: 3 (lower is better)
Translates to: PARACRLGRCCP*GDRPHPPRTDP
Trigger: AGGATCTGTGCGTGGGGGATGTGGTCTGTCTCCGCAAGGACAACATCGTCCCAGCCGACATGCTCTTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp TCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTaGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGT +
Preference number: 3 (lower is better)
Translates to: SSEESGWLSNVS*PERNDWLPRGC
Trigger: ACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CCA 72 bp TGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTaGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: WQSLHLRFVGLV*KWHRPLLGGVR
Trigger: CCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CAA 90 bp CAGAGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAATGACCGCCTGGCACTaGGACGCCAGGTCCACGAAG +
Preference number: 3 (lower is better)
Translates to: QRGGHTMGDGLDEDPVVEMTAWH*DARSTK
Trigger: CTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT...TTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CAA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTACCTGGTGGTACTTCTaGACCAGGGCCACGATCAGG +
Preference number: 3 (lower is better)
Translates to: GSRTGRARSRCSELPACPTWWYF*TRATIR
Trigger: CCTGATCGTGGCCCTGGTCAAGAAGTACCACCAGGT...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CAA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGTGCAGCAGGGCCGCATaGTGGAAGAGCAGCTTCCCG +
Preference number: 3 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEECSRAA*WKSSFP
Trigger: CGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCA...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGACGTTTGCGCGTGCTGTaGAAGTCCATTATGGCCAGG +
Preference number: 3 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRRLRVL*KSIMAR
Trigger: CCTGGCCATAATGGACTTCAACAGCACGCGCAAACG...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTGACTCAGATAGCCTGTaGCTGCTGGTGAGCACATAT +
Preference number: 3 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLDSDSL*LLVSTY
Trigger: ATATGTGCTCACCAGCAGCAACAGGCTATCTGAGTC...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CAA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTCTGTGCCCTTGGCAATaGCTCTTGGAAAGACTCAGA +
Preference number: 3 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLLCPWQ*LLERLR
Trigger: TCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAG...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CAA 90 bp TCCCCGTTGGTCCGCACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCTTCGAATGTGACCTCTCCTaGGTCAACAGCAACTTCTCA +
Preference number: 3 (lower is better)
Translates to: SPLVRTRCSRAALWKSSFECDLS*VNSNFS
Trigger: TGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTC...GAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTATGGCTCTGTCACTCTaGTGTCTCCCCATGTCGTCC +
Preference number: 3 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSMALSL*CLPMSS
Trigger: GGACGACATGGGGAGACACAAGAGTGACAGAGCCAT...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR TCA 72 bp CACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTaGAGAGCTCGTCCTTCTGCCCCACCACGTACAGCT +
Preference number: 3 (lower is better)
Translates to: HHGRWLGRRPSS*RARPSAPPRTA
Trigger: AGCTGTACGTGGTGGGGCAGAAGGACGAGCTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 72 bp GGTTTGCATATCCCTCACGGTGGGAGAAAGCATAGCTaGAACGGCGGGCACGAGACTCCCGGTGTACATGAG +
Preference number: 3 (lower is better)
Translates to: GLHIPHGGRKHS*NGGHETPGVHE
Trigger: CTCATGTACACCGGGAGTCTCGTGCCCGCCGTTCCAGCTATGCTTTCTCCCACCGTGAGGGATATGCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTACCTCTCCTGTGCCCTaGGCAATTGCTCTTGGAAAG +
Preference number: 3 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSTSPVP*AIALGK
Trigger: CTTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGT...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CAA 90 bp AAGATGACTCGGAGGGCCAGGACAGGGAAGGTGTTTATGGACACACTCAGCAGGGAAGGTGGCCTCTGCTaGGGTGACAATGACCTCTCC +
Preference number: 3 (lower is better)
Translates to: KMTRRARTGKVFMDTLSREGGLC*GDNDLS
Trigger: GGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTC...CCTGCTGAGTGTGTCCATAAACACCTTCCCTGTCCTGGCCCTCCGAGTCATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGATCATGTTGATGTCGTaGGCACCGTCCCCGATGGCC +
Preference number: 3 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEEIMLMS*APSPMA
Trigger: GGCCATCGGGGACGGTGCCAACGACATCAACATGAT...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR TCA 72 bp GCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTaGCTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAA +
Preference number: 3 (lower is better)
Translates to: ALPERCGGLQKC*LLLRGVWLALQ
Trigger: TTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CCA 72 bp GGCCCGGTTCCTGTCGGACTCTTCCCCATCAGAATCTaGCAGGGTCTGTTGTTGATGGCTCTGTCACTCTTG +
Preference number: 3 (lower is better)
Translates to: GPVPVGLFPIRI*QGLLLMALSLL
Trigger: CAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGATGGGGAAGAGTCCGACAGGAACCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGATGAGGAAGAACAGGTaGGACACGCGGTGGAACTGC +
Preference number: 3 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEEMRKNR*DTRWNC
Trigger: GCAGTTCCACCGCGTGTCCAACCTGTTCTTCCTCAT...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp CTGGTGGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTTTGATGTTGCTCTTCTaGAGACATTTGATGGTTTCA +
Preference number: 3 (lower is better)
Translates to: LVVAEAGGSRRVAADPQCLMLLF*RHLMVS
Trigger: TGAAACCATCAAATGTCTCAAGAAGAGCAACATCAA...ACACTGTGGATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR GCA 72 bp TTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTaGTTGGGTGACAATGACCTCTCCTGTGCCCTTGGC +
Preference number: 3 (lower is better)
Translates to: LVNSNFSGEGGL*LGDNDLSCALG
Trigger: GCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 72 bp GTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTGACTTaGAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: VFRGRPPACWLT*SRTGWSFFFPG
Trigger: TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGGGCCTTCCTCTAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 72 bp TGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATaGTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: CGVLVFRGRPPA*WLTCSRTGWSF
Trigger: GAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 72 bp TTCTTGTCATTCCATTCCAGGCACCCCACGAAGTGGTaGATCCGACTGTTAGGCGCCTCACACGTCACTGTG +
Preference number: 3 (lower is better)
Translates to: FLSFHSRHPTKW*IRLLGASHVTV
Trigger: CACAGTGACGTGTGAGGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCTGGAATGGAATGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp CTCGCTCGTGGACGTGGACGATTCTTCCAGACTTGGTaGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTC +
Preference number: 3 (lower is better)
Translates to: LARGRGRFFQTW*QSLHLRFVGLV
Trigger: GACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAGAATCGTCCACGTCCACGAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CAA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTCCCCCTGCATGCTGGTaGACTTGCAGCAGAACTGGC +
Preference number: 3 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSPPACW*TCSRTG
Trigger: GCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGGG...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp AAGATGACTCGGAGGGCCAGGACAGGGAAGGTGTTTATGGACACACTCAGCAGGTGGCAGGGTCTGTTGTaGATGGCTCTGTCACTCTTG +
Preference number: 3 (lower is better)
Translates to: KMTRRARTGKVFMDTLSRWQGLL*MALSLL
Trigger: CAAGAGTGACAGAGCCATCAACAACAGACCCTGCCA...CCTGCTGAGTGTGTCCATAAACACCTTCCCTGTCCTGGCCCTCCGAGTCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR TCA 72 bp GACGATTCTTCCAGACTTGGTGGCAGAGTCTCCACCTaGGATTTGTGGGTCTTGTCTGGAAGTGGCACCGTC +
Preference number: 3 (lower is better)
Translates to: DDSSRLGGRVST*DLWVLSGSGTV
Trigger: GACGGTGCCACTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAGAATCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 72 bp AGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATaGTGGCCATGCTCTTGTAGAAGAAGTAGCGCAGGA +
Preference number: 3 (lower is better)
Translates to: SRCSRQTRPAPS*WPCSCRRSSAG
Trigger: TCCTGCGCTACTTCTTCTACAAGAGCATGGCCAGCATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR GCA 72 bp TCCCCTCCGCAGAATTGTGCCCTGAGTGATGAGGTTTaGATATCCCTCACGGTGGGAGAAAGCATAGCTGGA +
Preference number: 3 (lower is better)
Translates to: SPPQNCALSDEV*ISLTVGESIAG
Trigger: TCCAGCTATGCTTTCTCCCACCGTGAGGGATATGCAAACCTCATCACTCAGGGCACAATTCTGCGGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp GCTCACGTCCTGCTCAAAGAGCCCAATGTAGAGAACTaGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCCAG +
Preference number: 3 (lower is better)
Translates to: AHVLLKEPNVEN*QGAVQEVEKSQ
Trigger: CTGGCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAGGACGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CCA 72 bp ATGATGATGATGAGGAAGAACAGGTTGGACACGCGGTaGAACTGCTCGTACAGGTTCAGCGGCAGGAACGAG +
Preference number: 3 (lower is better)
Translates to: MMMMRKNRLDTR*NCSYRFSGRNE
Trigger: CTCGTTCCTGCCGCTGAACCTGTACGAGCAGTTCCACCGCGTGTCCAACCTGTTCTTCCTCATCATCATCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp GCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTTTGGGGAGGGCAGGTaGGTTTTCTGGATGAAGAGC +
Preference number: 3 (lower is better)
Translates to: APFASSSGTVWRASKMLTFGEGR*VFWMKS
Trigger: GCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA...AGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CAA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAACCCACGTCCGCGGTCTaGATCATGTTGATGTCGTTG +
Preference number: 3 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEPTSAV*IMLMSL
Trigger: CAACGACATCAACATGATCAAGACCGCGGACGTGGG...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR-3UTR CAA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGGTGAGCACCCATATTTaGATGTTGCTCTTCTTGAGA +
Preference number: 3 (lower is better)
Translates to: GGAAGSRTGRARSRCSELVSTHI*MLLFLR
Trigger: TCTCAAGAAGAGCAACATCAAAATATGGGTGCTCAC...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp GACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTaGAAAGACTCAGATAGCCTGTTGCTGCTGGTGAGC +
Preference number: 3 (lower is better)
Translates to: DNDLSCALGNCS*KDSDSLLLLVS
Trigger: GCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CCA 72 bp TCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTGCTTaGGTGACAATGACCTCTCCTGTGCCCTTGGCAATT +
Preference number: 3 (lower is better)
Translates to: STATSQEKVASA*VTMTSPVPLAI
Trigger: AATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CAA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGCTGATGCAGCACTTGTaGAAGGTCAAGATGTTCTGC +
Preference number: 3 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEELMQHL*KVKMFC
Trigger: GCAGAACATCTTGACCTTCAACAAGTGCTGCATCAG...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCTTTGGGGAGGGCAGGTaGGTTTTCTGGATGAAGAGC +
Preference number: 3 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSFGEGR*VFWMKS
Trigger: GCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp CACCACGGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGACTCAGATAGCCTGTaGCTGCTGGTGAGCACATAT +
Preference number: 3 (lower is better)
Translates to: HHGDEDHNHQLVHQEVQLDSDSL*LLVSTY
Trigger: ATATGTGCTCACCAGCAGCAACAGGCTATCTGAGTC...AAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCCGTGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR-3UTR CAA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCGCCGTGCGGATGACATaGGTCTTGTATTTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: FKNADFSSEESGWLSNVSAVRMT*VLYFFL
Trigger: AAGGAAGAAATACAAGACCAATGTCATCCGCACGGC...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR TCA 72 bp GCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGTaGGCACATATTTGGGGAGGGCAGGTTGGTTTTCTG +
Preference number: 3 (lower is better)
Translates to: ALGKTQIACCCW*AHIWGGQVGFL
Trigger: CAGAAAACCAACCTGCCCTCCCCAAATATGTGCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR TCA 72 bp CAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTaGAAAGAGCCAGGAACCATCCTTCATACAGGGGCT +
Preference number: 3 (lower is better)
Translates to: QCRELAGCCTGG*KEPGTILHTGA
Trigger: AGCCCCTGTATGAAGGATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR GCA 72 bp TTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTaGTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: LGDNDLSCALGN*SWKDSDSLLLL
Trigger: CAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR GCA 72 bp CTGTGTTGCGAATCCTGCAGCCTCGGAGGAGGAGGTTaGCAATGTCCAGGGAGTATTTCTTGTCATTCCATT +
Preference number: 3 (lower is better)
Translates to: LCCESCSLGGGG*QCPGSISCHSI
Trigger: AATGGAATGACAAGAAATACTCCCTGGACATTGGCAACCTCCTCCTCCGAGGCTGCAGGATTCGCAACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CCA 72 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTaGCTCTCCAACGTCAGCTGGCCTGAAAGAAATGAC +
Preference number: 3 (lower is better)
Translates to: FKNADFSSEESG*LSNVSWPERND
Trigger: GTCATTTCTTTCAGGCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR-3UTR CAA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTTGTAATTCCAGTGCTTaGAAAAGCGGAGGCAGGCGG +
Preference number: 3 (lower is better)
Translates to: RNTQQFEFQHPQIKACESCNSSA*KSGGRR
Trigger: CCGCCTGCCTCCGCTTTTCAAAGCACTGGAATTACA...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR-3UTR CAA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTTGCAATGCCAATATTTaGGAGGCTGAGGCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: RNTQQFEFQHPQIKACESCNANI*EAEAGR
Trigger: TCTGCCTGCCTCAGCCTCCAAAATATTGGCATTGCA...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR-3UTR CAA 90 bp ATGGATCTTGCCACAGTTCTTCATAATTTTTGTGTCAAAACCAGCATAAATGACCGGATGACATTGGTCTaGTATTTCTTCCTTTGCCAG +
Preference number: 3 (lower is better)
Translates to: MDLATVLHNFCVKTSINDRMTLV*YFFLCQ
Trigger: CTGGCAAAGGAAGAAATACAAGACCAATGTCATCCG...GTCATTTATGCTGGTTTTGACACAAAAATTATGAAGAACTGTGGCAAGATCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GCGCGCTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTGGCTCTGGAGTCCTGGGCTaGCGGTGCAGCCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ARSCSTSELRRALESWAGSGVLG*RCSQRE
Trigger: CTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGA...GCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp GGTGCAGCCAGCGGGAGCCCGAACCTCCGGCACAGCAGGGACAGGCGCCTGGCGTGGCACCGTCCCCGATaGCCAGGGTCACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: GAASGSPNLRHSRDRRLAWHRPR*PGSPPG
Trigger: ACCAGGTGGTGACCCTGGCCATCGGGGACGGTGCCA...CGCCAGGCGCCTGTCCCTGCTGTGCCGGAGGTTCGGGCTCCCGCTGGCTGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR GCA 90 bp GGTGCAGCCAGCGGGAGCCCGAACCTCCGGCACAGCAGGGACAGGCGCCTGGCGGACTGGCCGAGCTCCTaGCACGCCTCGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: GAASGSPNLRHSRDRRLADWPSS*HASSMF
Trigger: GAACATGGACGAGGCGTGGCAGGAGCTCGGCCAGTC...CGCCAGGCGCCTGTCCCTGCTGTGCCGGAGGTTCGGGCTCCCGCTGGCTGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
3UTR CAA 72 bp AGCAGGCGCCAGAACTCCCGCACGGCCTCGTCCCCGTaGGTCCGCACGAGGTGCAGCAGGGCCGCATTGTGG +
Preference number: 4 (lower is better)
Translates to: SRRQNSRTASSP*VRTRCSRAALW
Trigger: CCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGACGAGGCCGTGCGGGAGTTCTGGCGCCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp GCGCGCTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTGGCACAGGGGCTGGCCGGTaGAGCCGTTGTAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: ARSCSTSELRRALESWAGTGAGR*SRCSRQ
Trigger: TTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGT...GCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp GCGCGCTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTGGCACGATCAGGGCCTTCTaGTTGGGCGTCACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: ARSCSTSELRRALESWAGTIRAF*LGVTRQ
Trigger: CTGCCGCGTGACGCCCAAGCAGAAGGCCCTGATCGT...GCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp ATGACCGCCTGGCACTTGGACGCCAGGTCCACGAAGGCGCGCTCCTGCAGCACCCTCTCTGGCCGAGGCTaGCCATGCTGGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: MTAWHLDARSTKARSCSTLSGRG*PCWWGS
Trigger: GGAGCCCCACCAGCATGGGCAGCCTCGGCCAGAGAG...GGTGCTGCAGGAGCGCGCCTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CGCCTGGTACAACAGCTGGTCTGGGCGCTCACGGGGGCTCTCCCGCACCATCACCGTGTCCCCAGGTCCTaGTGGGGCAGGGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RLVQQLVWALTGALPHHHRVPRS*WGRAWL
Trigger: GAGCCAAGCCCTGCCCCACCAGGACCTGGGGACACG...GTGATGGTGCGGGAGAGCCCCCGTGAGCGCCCAGACCAGCTGTTGTACCAGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GCGCGCTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTGGCCTCCTCCGAGGAGTCTaGCTGGCTCTCCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: ARSCSTSELRRALESWAGLLRGV*LALQRQ
Trigger: CTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAG...GCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp TCCCCGTTGGTCCGCACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCTTCGGCTGCCCATGCTGGTaGGGCTCCGCGGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPLVRTRCSRAALWKSSFGCPCW*GSADAS
Trigger: GCTGGCATCCGCGGAGCCCCACCAGCATGGGCAGCC...GAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp TGTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTGGCCCAGGTGGTCGTTaGGGCTGGTGCTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: CGSCLEVAPSPPWGCEAPGPGGR*GWCCGP
Trigger: AGGCCCGCAGCACCAGCCTCAACGACCACCTGGGCC...AGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CGCCTGGTACAACAGCTGGTCTGGGCGCTCACGGGGGCTCTCCCGCACCATCACGGCTTCTCCAGGCTCTaGTCTGCGCTCACGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLVQQLVWALTGALPHHHGFSRL*SALTSC
Trigger: GCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCC...GTGATGGTGCGGGAGAGCCCCCGTGAGCGCCCAGACCAGCTGTTGTACCAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp GCGCGCTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTGGCGGAGAAGGTGGCCTCTaGTTGGGTGACAATGACCTC +
Preference number: 4 (lower is better)
Translates to: ARSCSTSELRRALESWAGGEGGL*LGDNDL
Trigger: GAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCC...GCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GCTCTGCAAGGGTTCGCCATCAGGGCCTCGGCCTCTGTCCTCGTCCCGGCCAAAGCCTGGTACAACAGCTaGTCTGGGCGCTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: ALQGFAIRASASVLVPAKAWYNS*SGRSRG
Trigger: CCCCCGTGAGCGCCCAGACCAGCTGTTGTACCAGGC...TTTGGCCGGGACGAGGACAGAGGCCGAGGCCCTGATGGCGAACCCTTGCAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCAGGCTGGCCTCCTGGTaGCGCTGCTGCCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPRLASW*RCCQSS
Trigger: CGAGGACTGGCAGCAGCGCCACCAGGAGGCCAGCCT...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCATTCCAGGCACCCCACGAAGTGGTGCATCCGACTGTTAGGCGCCTCACACGTAGGACTGGTGGTCGCTaGAGCTGGCGGGTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PFQAPHEVVHPTVRRLTRRTGGR*SWRVPP
Trigger: CGGCGGGACCCGCCAGCTTCAGCGACCACCAGTCCT...ACGTGTGAGGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCTGGAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp CTGGTGGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCGTAGAAACCAAGGCTaGGGAGGATGGTCGCCACGC +
Preference number: 4 (lower is better)
Translates to: LVVAEAGGSRRVAADPQCRRNQG*GGWSPR
Trigger: GCGTGGCGACCATCCTCCTCAGCCTTGGTTTCTACG...ACACTGTGGATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTCTCAGGTGCCCCTCTaGCTGGGGAGTCTCCCATCC +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFSQVPL*LGSLPS
Trigger: GGATGGGAGACTCCCCAGGCAGAGGGGCACCTGAGA...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR GCA 90 bp GCGCGCTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTGGCCTCGGAGGAGGAGGTTaGCAATGTCCAGGGAGTATT +
Preference number: 4 (lower is better)
Translates to: ARSCSTSELRRALESWAGLGGGG*QCPGSI
Trigger: AATACTCCCTGGACATTGGCAACCTCCTCCTCCGAG...GCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GCTCTGCAAGGGTTCGCCATCAGGGCCTCGGCCTCTGTCCTCGTCCCGGCCAAATGCTGGGCTCCGTGCTaGCCAGCAAGAGCATGTCGG +
Preference number: 4 (lower is better)
Translates to: ALQGFAIRASASVLVPAKCWAPC*PARACR
Trigger: CCGACATGCTCTTGCTGGCCAGCACGGAGCCCAGCA...TTTGGCCGGGACGAGGACAGAGGCCGAGGCCCTGATGGCGAACCCTTGCAGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCTCTGGAGTCCTGGGCTaGCGGTGCAGCCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSSGVLG*RCSQRE
Trigger: CTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGA...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCGGGCTCTGGAGTCCTaGGCTGGCGGTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGAAGSRTGRARSRCSELRALES*AGGAAS
Trigger: GCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCG...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp CGCCTGGTACAACAGCTGGTCTGGGCGCTCACGGGGGCTCTCCCGCACCATCACGCACCGTCCCCTCCTTaGGGGTGTGAGGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RLVQQLVWALTGALPHHHAPSPP*GCEAPF
Trigger: AAAAGGAGCCTCACACCCCCAAGGAGGGGACGGTGC...GTGATGGTGCGGGAGAGCCCCCGTGAGCGCCCAGACCAGCTGTTGTACCAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTGTGCTCCTGGGAGTCTaGGCGGGGCCAGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLVLLGV*AGPVPI
Trigger: AATGGGCACTGGCCCCGCTCAGACTCCCAGGAGCAC...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCCTCCCATCCCAGCTCTaGTCACCGTCTCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPLPSQL*SPSHLR
Trigger: GCGGAGGTGAGACGGTGATCAGAGCTGGGATGGGAG...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR TCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCGCACGTCCCAGTCGATaGAGACGCTGTTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFARPSR*RRCSPG
Trigger: ACCTGGGGAACAGCGTCTTCATCGACTGGGACGTGC...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCACAGGGGCTGGCCGGTaGAGCCGTTGTAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPTGAGR*SRCSRQ
Trigger: TTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGT...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCGACTCCCGGTGTACATaGGGCAAGGGCTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFDSRCT*GKGSMV
Trigger: CACCATGGAGCCCTTGCCTCATGTACACCGGGAGTC...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGGCCTGTGCCCGGTTCTaGAGCAGGAGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGAAGSRTGRARSRCSELACARF*SRRLAS
Trigger: GGAGGCCAGCCTCCTGCTGCAGAACCGGGCACAGGC...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp TGTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTCTGAACTGCCTGCATaGCCTCCTGGCCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CGSCLEVAPSPPWGCEAPSELPA*PPGPPA
Trigger: GGCTGGCGGGCCAGGAGGGCATGCAGGCAGTTCAGA...AGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCGGCTTCTCCAGGCTCTaGTCTGCGCTCACGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPGFSRL*SALTSC
Trigger: GCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCC...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp ATGACCGCCTGGCACTTGGACGCCAGGTCCACGAAGGCGCGCTCCTGCAGCACCAAGAGCTCGTCCTTCTaGCCCACCACGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: MTAWHLDARSTKARSCSTKSSSF*PTTYSS
Trigger: GGAGCTGTACGTGGTGGGGCAGAAGGACGAGCTCTT...GGTGCTGCAGGAGCGCGCCTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATGGGGGCAAGGATAGCTaGTCCTCCCCGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHGGKDS*SSPGTS
Trigger: GCTGGTGCCCGGGGAGGAGCAGCTATCCTTGCCCCC...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCGCCTGGTACAACAGCTaGTCTGGGCGCTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFAWYNS*SGRSRG
Trigger: CCCCCGTGAGCGCCCAGACCAGCTGTTGTACCAGGC...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTCCGTGTCGGCGCCCTTaGTGTACAGGCAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLPCRRP*CTGRWR
Trigger: GCGCCATCTGCCTGTACACCAAGGGCGCCGACACGG...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCTCTGCAGCAGGAGGCTaGCCTCCTGGTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFSAAGG*PPGGAA
Trigger: AGCAGCGCCACCAGGAGGCCAGCCTCCTGCTGCAGA...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ATGACCGCCTGGCACTTGGACGCCAGGTCCACGAAGGCGCGCTCCTGCAGCACCTCAGGGACACCGTCCTaGAGTCTGTCCTCGATGGCT +
Preference number: 4 (lower is better)
Translates to: MTAWHLDARSTKARSCSTSGTPS*SLSSMA
Trigger: AGCCATCGAGGACAGACTCCAGGACGGTGTCCCTGA...GGTGCTGCAGGAGCGCGCCTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGCAGGGACAGGCGCCTGGCGTAGAGGAAATCCCTCCTGGACTGGCCGAGCTCAGAGGAAATCCCTCCTaGACTGGCCGAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QQGQAPGVEEIPPGLAELRGNPS*TGRAPA
Trigger: GGCAGGAGCTCGGCCAGTCCAGGAGGGATTTCCTCT...GAGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR CCA 90 bp CCGGCTTCTCCAGGCTCTGCTCTGCGCTCACGTCCTGCTCAAAGAGCCCAATGTTCTGGAGTCCTGGGCTaGCGGTGCAGCCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: PASPGSALRSRPAQRAQCSGVLG*RCSQRE
Trigger: CTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGA...ACATTGGGCTCTTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGGAGAAGGTGGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCACGGGCTCTGGAGTCCTaGGCTGGCGGTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QEKVASAWVTMTSPVPLARALES*AGGAAS
Trigger: GCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCG...TGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TGTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTGGCACCGTCCCCGATaGCCAGGGTCACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: CGSCLEVAPSPPWGCEAPWHRPR*PGSPPG
Trigger: ACCAGGTGGTGACCCTGGCCATCGGGGACGGTGCCA...AGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GCGCGCTCCTGCAGCACCTCGGAGCTACGGCGGGCTCTGGAGTCCTGGGCTGGCTCTTCCGGAACGGTGTaGAGGGCTTCAAAAATGCTG +
Preference number: 4 (lower is better)
Translates to: ARSCSTSELRRALESWAGSSGTV*RASKML
Trigger: CAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGA...GCCAGCCCAGGACTCCAGAGCCCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAAAGTTCCGGGCTGCGGTaGCCAGCGCCCCCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: GVRLLLPALPERCGGLQKSSGLR*PAPPRR
Trigger: CCGACGAGGGGGCGCTGGTCACCGCAGCCCGGAACT...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATTCACGCGGCAGCAGATaGCCGCCTGGCACTTGGACG +
Preference number: 4 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHSRGSR*PPGTWT
Trigger: CGTCCAAGTGCCAGGCGGTCATCTGCTGCCGCGTGA...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR TCA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGACAGGGGCTGGCCGGTaGAGCCGTTGTAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSATGAGR*SRCSRQ
Trigger: TTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGT...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TGTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTCCCTCCTTGGGGGTGTaGGGCTCCTTTTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CGSCLEVAPSPPWGCEAPPSLGV*GSFCQL
Trigger: GAGCTGGCAAAAGGAGCCTCACACCCCCAAGGAGGG...AGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TGTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTCTCCGCAGAGGGCAATaGCTGCTCCTCTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: CGSCLEVAPSPPWGCEAPLRRGQ*LLLWGQ
Trigger: TTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAG...AGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCTTGGTCCGCACGAGGTaGAGCAGGGCCGCATTGTGG +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFLVRTR*SRAALW
Trigger: CCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAA...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCCTCCAGGCTCTGCTCTaGGCTCACGTCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFLQALL*AHVLLK
Trigger: TTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAG...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCAAGAGCTCGTCCTTCTaGCCCACCACGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFKSSSF*PTTYSS
Trigger: GGAGCTGTACGTGGTGGGGCAGAAGGACGAGCTCTT...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCGGCCGAGGCTGCCCATaGTGGTGGGGCTCCGCGGAT +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLGRGCP*WWGSAD
Trigger: ATCCGCGGAGCCCCACCAGCATGGGCAGCCTCGGCC...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp CGCCTGGTACAACAGCTGGTCTGGGCGCTCACGGGGGCTCTCCCGCACCATCACCAAACGCCTAATGAATaGAGGCCCGGTTCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: RLVQQLVWALTGALPHHHQTPNE*RPGSCR
Trigger: CCGACAGGAACCGGGCCTGCATTCATTAGGCGTTTG...GTGATGGTGCGGGAGAGCCCCCGTGAGCGCCCAGACCAGCTGTTGTACCAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AGCAGGGACAGGCGCCAGGAAGTCTCCGTTAATGACCAAGGCCAGCTTGACCTGTGGTGCTGCGGGCCTTaGCAGGCACGTCCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SRDRRQEVSVNDQGQLDLWCCGP*QARPAA
Trigger: AGCCGCAGGACGTGCCTGCCAAGGCCCGCAGCACCA...CAGGTCAAGCTGGCCTTGGTCATTAACGGAGACTTCCTGGCGCCTGTCCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp ACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCTTCCCGTCGGCGAACTTGGTACAACAGCTGGTCTaGGCGCTCACGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TRCSRAALWKSSFPSANLVQQLV*ALTGAL
Trigger: GAGAGCCCCCGTGAGCGCCCAGACCAGCTGTTGTAC...CAAGTTCGCCGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTCCTGGCTCGGGGGAGGCCGCCTaGTACAACAGCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RTGRARSRCSELPACPPGSGEAA*YNSWSG
Trigger: CCCAGACCAGCTGTTGTACCAGGCGGCCTCCCCCGA...GCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTAGGAGGCTGGCCTCCTaGTGGCGCTGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSRRLAS*WRCCQS
Trigger: GGACTGGCAGCAGCGCCACCAGGAGGCCAGCCTCCT...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTAGGAGGCTGGCCTCCTaGTGGCGCTGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTRRLAS*WRCCQS
Trigger: GGACTGGCAGCAGCGCCACCAGGAGGCCAGCCTCCT...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTCAGGGACACCGTCCTaGAGTCTGTCCTCGATGGCT +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFSGTPS*SLSSMA
Trigger: AGCCATCGAGGACAGACTCCAGGACGGTGTCCCTGA...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTCAGCAGATGACCGCCTaGCACTTGGACGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLQQMTA*HLDARS
Trigger: GGACCTGGCGTCCAAGTGCCAGGCGGTCATCTGCTG...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGCAGGGACAGGCGCCTGGCGTAGAGGAAATCCCTCCTGGACTGGCCGAGCTCTGCAGGAAGCAGAACTaGCCGAGCACGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: QQGQAPGVEEIPPGLAELCRKQN*PSTKSL
Trigger: CAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCA...GAGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR TCA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGTTCCTGAGTCACGTCTaGGTCACCCGTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSAFLSHV*VTRVPR
Trigger: CCTGGGGACACGGGTGACTCAGACGTGACTCAGGAA...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TGTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTGGACCTGAGCCTTCCTaGGTCACGTCTGAGTCACCC +
Preference number: 4 (lower is better)
Translates to: CGSCLEVAPSPPWGCEAPGPEPS*VTSESP
Trigger: GGGTGACTCAGACGTGACTCAGGAAGGCTCAGGTCC...AGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCGGATCACCTTCTCCTTaGACTGCCCGTTGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFGSPSP*TARCRH
Trigger: GTGCCTACAACGGGCAGTTCAAGGAGAAGGTGATCC...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AGAGGCTGTGGCTGGCTCTCAAATGACGACAGCTGGCTTTCTCTGTGCAACAGTAGTTCCGGGCTGCGGTaGCCAGCGCCCCCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: RGCGWLSNDDSWLSLCNSSSGLR*PAPPRR
Trigger: CCGACGAGGGGGCGCTGGTCACCGCAGCCCGGAACT...ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGAGAGCCAGCCACAGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CAGCAGGGACAGGCGCCTGGCGTAGAGGAAATCCCTCCTGGACTGGCCGAGCTCCGAAGACCCAGTAGTTaGAGAGCTCGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QQGQAPGVEEIPPGLAELRRPSS*RARPSA
Trigger: GGCAGAAGGACGAGCTCTTCAACTACTGGGTCTTCG...GAGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR TCA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGAAGGACTGGTGGTCGCTaGAGCTGGCGGGTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGRTGGR*SWRVPP
Trigger: CGGCGGGACCCGCCAGCTTCAGCGACCACCAGTCCT...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGGCAAGGGCTCCATGGTaGAAATCTCCTCGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSAARAPW*KSPRWG
Trigger: GCCCCAGCGAGGAGATTTTCACCATGGAGCCCTTGC...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGATGGCTCCCAGCAGCCTaGGGTCCTGCTCCATCTCGT +
Preference number: 4 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRWLPAA*GPAPSR
Trigger: ACGAGATGGAGCAGGACCTCAGGCTGCTGGGAGCCA...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTTCCATGTTCACGTTCTaGGCCAGGGCGCGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GSRTGRARSRCSELPACPSMFTF*ARARGS
Trigger: GGAGCCGCGCGCCCTGGCGCAGAACGTGAACATGGA...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR GCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGGTCCTGGGCTGGCGGTaGAGCCAGCGGGAGCCCGAA +
Preference number: 4 (lower is better)
Translates to: LFRNGVEGFKNADFSSEEVLGWR*SQREPE
Trigger: TTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGAC...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CTTGTGTCTCCCCATGTCGTCCACCAGGTCCCGGGTGGCACGGATGAAGAGGAGTCCACCTCCATAGGCTaGTCGCTCGTGGACGTGGAC +
Preference number: 4 (lower is better)
Translates to: LVSPHVVHQVPGGTDEEESTSIG*SLVDVD
Trigger: GTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGA...CTCCTCTTCATCCGTGCCACCCGGGACCTGGTGGACGACATGGGGAGACACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp TGGGTGACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCGGAGGCCCCTCCCTCTaGCAACCCTCCCCACACCGG +
Preference number: 4 (lower is better)
Translates to: WVTIRACLNFKLVSPSMSGGPSL*QPSPHR
Trigger: CCGGTGTGGGGAGGGTTGGCAGAGGGAGGGGCCTCC...GGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGTCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCCCGTGGGGGCAGACTaGGGATTGGAGAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFPVGAD*GLESWR
Trigger: TCTCCAACTCTCCAATCCCCAGTCTGCCCCCACGGG...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTCCTGGCGCTCAGGGCCAGCTCTaGTGCTCCTGGGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RTGRARSRCSELPACPPGAQGQL*CSWESE
Trigger: CTCAGACTCCCAGGAGCACCAGAGCTGGCCCTGAGC...GCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGGGCTGCCCATGCTGGTaGGGCCTTCTGGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSAGCPCW*GLLVSI
Trigger: AATGGAGACCAGAAGGCCCCACCAGCATGGGCAGCC...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCCAAGAGCATGTCGGCTaGGACGATGTTGTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFQEHVG*DDVVLA
Trigger: CGCAAGGACAACATCGTCCCAGCCGACATGCTCTTG...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ACAGCAGGGACAGGCGCCTGGCGTAGAGGAAATCCCTCCTGGACTGGCCGAGCTAGGGTCACCACCTGGTaGTACTTCTTGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TAGTGAWRRGNPSWTGRARVTTW*YFLTRA
Trigger: GGCCCTGGTCAAGAAGTACCACCAGGTGGTGACCCT...AGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR CCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTTGGCACCGTCCCCGATaGCCAGGGTCACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTWHRPR*PGSPPG
Trigger: ACCAGGTGGTGACCCTGGCCATCGGGGACGGTGCCA...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCACGACCGCAAAGGACTaGTGGTCGCTGAAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFTTAKD*WSLKLA
Trigger: CGCCAGCTTCAGCGACCACCAGTCCTTTGCGGTCGT...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCACCTGCCCCTGTGGCTaGTGCTTCTTCTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSTCPCG*CFFFPR
Trigger: CCTGGGGAAGAAGAAGCACCAGCCACAGGGGCAGGT...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCTTCCCGTCGGCGAACTTGACCTGCCCCTGTGGCTaGTGCTTCTTCTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TRCSRAALWKSSFPSANLTCPCG*CFFFPR
Trigger: CCTGGGGAAGAAGAAGCACCAGCCACAGGGGCAGGT...CAAGTTCGCCGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AAGATGACTCGGAGGGCCAGGACAGGGAAGGTGTTTATGGACACACTCAGCAGGCGAGGCTGCCCATGCTaGTGGGGCTCCGCGGATGCC +
Preference number: 4 (lower is better)
Translates to: KMTRRARTGKVFMDTLSRRGCPC*WGSADA
Trigger: GGCATCCGCGGAGCCCCACCAGCATGGGCAGCCTCG...CCTGCTGAGTGTGTCCATAAACACCTTCCCTGTCCTGGCCCTCCGAGTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 72 bp TGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTTaGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: WHRPLLGGVRLL*PALPERCGGLQ
Trigger: TTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGGTGGTACTTCTTaGCCAGGGCCACGATCAGGG +
Preference number: 4 (lower is better)
Translates to: GGAAGSRTGRARSRCSELPGGTS*PGPRSG
Trigger: CCCTGATCGTGGCCCTGGTCAAGAAGTACCACCAGG...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR TCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCACGAAGTCGCTGTTCTaGACTGCCTGCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSTKSLF*TACMPS
Trigger: GGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGT...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AGCAGGGACAGGCGCCAGGAAGTCTCCGTTAATGACCAAGGCCAGCTTGACCTGCTCCGCAGAGGGCAATaGCTGCTCCTCTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: SRDRRQEVSVNDQGQLDLLRRGQ*LLLWGQ
Trigger: TTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAG...CAGGTCAAGCTGGCCTTGGTCATTAACGGAGACTTCCTGGCGCCTGTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTCCCCTGCATGCTGGTTaGCTTGCAGCAGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLPLHAG*LAAELA
Trigger: AGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGG...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTGGCTGCTGGGCTCCGTaGTGGCCAGCAAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTGCWAP*WPARAC
Trigger: ACATGCTCTTGCTGGCCAGCACGGAGCCCAGCAGCC...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCGCTCCCAGCAGCTGTTaGAGGGCCTGTGCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGAPSSC*RACARF
Trigger: GAACCGGGCACAGGCCCTGCAACAGCTGCTGGGAGC...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR GCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCATGTTCACGTTCTaGGCCAGGGCGCGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLSMFTF*ARARGS
Trigger: GGAGCCGCGCGCCCTGGCGCAGAACGTGAACATGGA...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR GCA 90 bp CAGGAGAAGGTGGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAACGATCAGGGCCTTCTaGTTGGGCGTCACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QEKVASAWVTMTSPVPLATIRAF*LGVTRQ
Trigger: CTGCCGCGTGACGCCCAAGCAGAAGGCCCTGATCGT...TGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCGGAAGGCCCCCTGCATaGTGGTTGACTTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSGRPPA*WLTCSR
Trigger: TCTGCTGCAAGTCAACCAGCATGCAGGGGGCCTTCC...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCTCGTTGTACACCTGTTaGAGGGCCTGTGCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSSLYTC*RACARF
Trigger: GAACCGGGCACAGGCCCTGCAACAGGTGTACAACGA...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTGCTCAGGGCCAGCTCTaGTGCTCCTGGGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTAQGQL*CSWESE
Trigger: CTCAGACTCCCAGGAGCACCAGAGCTGGCCCTGAGC...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTCATAGCACAGGCTGCTaGGCTCCGTGCTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTHSTGC*APCWPA
Trigger: TGCTGGCCAGCACGGAGCCCAGCAGCCTGTGCTATG...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGGCACCCCACGAAGTaGTGCATCCGACTGTTAGGC +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSRHPTK*CIRLLG
Trigger: GCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCT...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGAAGCAGGGCCGCATTGTaGAAGAGCAGCTTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRSRAAL*KSSFPS
Trigger: CGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCT...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCCCGTGTCGGCGCCCTTaGTGTACAGGCAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGPCRRP*CTGRWR
Trigger: GCGCCATCTGCCTGTACACCAAGGGCGCCGACACGG...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCGTCCGCAGGGTCTCCTaGGCAAAGGCAGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGVRRVS*AKAAKA
Trigger: GGCCTTGGCTGCCTTTGCCCAGGAGACCCTGCGGAC...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ATACAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATGCAGGGACAGGCGCCTaGCGTAGAGGAAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: IQGLAGEAVVAGKPDLHHAGTGA*RRGNPS
Trigger: GGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGC...ATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR CCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCTGCAGGAAGCAGAACTaGCCGAGCACGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSCRKQN*PSTKSL
Trigger: CAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCA...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGACGACCGCAAAGGACTaGTGGTCGCTGAAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GGAAGSRTGRARSRCSELTTAKD*WSLKLA
Trigger: CGCCAGCTTCAGCGACCACCAGTCCTTTGCGGTCGT...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CCGGCTTCTCCAGGCTCTGCTCTGCGCTCACGTCCTGCTCAAAGAGCCCAATGTGGGAGCTGTACTTCCTaGGAGGACACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PASPGSALRSRPAQRAQCGSCTS*EDTCPC
Trigger: ACAGGGGCAGGTGTCCTCCCAGGAAGTACAGCTCCC...ACATTGGGCTCTTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCCCCAGAGGCTGTGGCTaGCTCTCAAATGACGACAGC +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSPRGCG*LSNDDS
Trigger: GCTGTCGTCATTTGAGAGCCAGCCACAGCCTCTGGG...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAATCCGAGGAGTCTGGCTaGCTCTCCAACGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CGHAAPMHPREVVVVVFESEESG*LSNVSW
Trigger: CCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGA...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CTGAGCGAGAACCAGGGCAGCGTGGAGATGTCGGGAATGCTCTGCAGGATGATGGGAGTCTGTCCTCGATaGCTGTGGCTCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSENQGSVEMSGMLCRMMGVCPR*LWLPAA
Trigger: GGCTGCTGGGAGCCACAGCCATCGAGGACAGACTCC...CATCATCCTGCAGAGCATTCCCGACATCTCCACGCTGCCCTGGTTCTCGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 72 bp GCCAGCAAGAGCATGTCGGCTGGGACGATGTTGTCCTaGCGGAGACAGACCACATCCCCCACGCACAGATCC +
Preference number: 4 (lower is better)
Translates to: ASKSMSAGTMLS*RRQTTSPTHRS
Trigger: GGATCTGTGCGTGGGGGATGTGGTCTGTCTCCGCAAGGACAACATCGTCCCAGCCGACATGCTCTTGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 72 bp CTGTGCAAGCGTTCGAAGATGACCGTGTCGGCGCCCTaGGTGTACAGGCAGATGGCGCCCTCTGGCTTTCGA +
Preference number: 4 (lower is better)
Translates to: LCKRSKMTVSAP*VYRQMAPSGFR
Trigger: TCGAAAGCCAGAGGGCGCCATCTGCCTGTACACCAAGGGCGCCGACACGGTCATCTTCGAACGCTTGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTGATGCCAGCAGGACCTaGGCCTTCCTGAGTCACGTC +
Preference number: 4 (lower is better)
Translates to: GSRTGRARSRCSELPACPDASRT*AFLSHV
Trigger: GACGTGACTCAGGAAGGCTCAGGTCCTGCTGGCATC...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCGGCAGGGTCTGTTGTTaGTGGCTCTGTCACTCTTGT +
Preference number: 4 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPGRVCC*WLCHSC
Trigger: ACAAGAGTGACAGAGCCATCAACAACAGACCCTGCC...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCCCATCAGGGCCTGTCTaGACTTCAAGTTGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSPSGPV*TSSWSP
Trigger: GGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGG...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAGGCCCAGGTGGTCGTTaGGGCTGGTGCTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEGPGGR*GWCCGP
Trigger: AGGCCCGCAGCACCAGCCTCAACGACCACCTGGGCC...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATCACGCGGCAGCAGATaGCCGCCTGGCACTTGGACG +
Preference number: 4 (lower is better)
Translates to: GVRLLLPALPERCGGLQKSRGSR*PPGTWT
Trigger: CGTCCAAGTGCCAGGCGGTCATCTGCTGCCGCGTGA...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CAGCAGGGACAGGCGCCTGGCGTAGAGGAAATCCCTCCTGGACTGGCCGAGCTCTGCTGTACAGGAGGTTaGAAAGAGCCAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: QQGQAPGVEEIPPGLAELCCTGG*KEPGTI
Trigger: GATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCA...GAGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR TCA 90 bp TGTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTCGAAGACCCAGTAGTTaGAGAGCTCGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CGSCLEVAPSPPWGCEAPRRPSS*RARPSA
Trigger: GGCAGAAGGACGAGCTCTTCAACTACTGGGTCTTCG...AGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGGGACGATGTTGTCCTTaGGGAGACAGACCACATCCC +
Preference number: 4 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSAGRCCP*GDRPHP
Trigger: GGGATGTGGTCTGTCTCCGCAAGGACAACATCGTCC...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCCCACATAGCACAGGCTaGTGGGCTCCGTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGPHSTG*WAPCWP
Trigger: TGGCCAGCACGGAGCCCAGCAGCCTGTGCTATGTGG...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTCACCCCACGAAGTGGTaGATCCGACTGTTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTHPTKW*IRLLGA
Trigger: GGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTG...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp TGGGTGACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCACTCTGCGGCCACGCTaGTCCCATGCACCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: WVTIRACLNFKLVSPSMSTLRPR*SHAPPR
Trigger: TCTCGGGGGTGCATGGGAGCAGCGTGGCCGCAGAGT...GGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGTCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp AGCAGGGACAGGCGCCAGGAAGTCTCCGTTAATGACCAAGGCCAGCTTGACCTGGACGAAGAAGGACTCTaGGGCCACGCTGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: SRDRRQEVSVNDQGQLDLDEEGL*GHAAPM
Trigger: CATGGGAGCAGCGTGGCCGCAGAGTCCTTCTTCGTC...CAGGTCAAGCTGGCCTTGGTCATTAACGGAGACTTCCTGGCGCCTGTCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTTGGTCCGCACGAGGTaGAGCAGGGCCGCATTGTGG +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLLVRTR*SRAALW
Trigger: CCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAA...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCCTGTTGCAGGGCCTGTaGCCGGTTCTGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLLLQGL*PVLQQE
Trigger: CTCCTGCTGCAGAACCGGGCACAGGCCCTGCAACAG...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CAGAGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAACGAAGGCGCGCTCCTaGAGCACCTCGGAGCTACGG +
Preference number: 4 (lower is better)
Translates to: QRGGHTMGDGLDEDPVVETKARS*STSELR
Trigger: CCGTAGCTCCGAGGTGCTGCAGGAGCGCGCCTTCGT...TTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp CAGAGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAATCTGAACTGCCTGCATaGCCTCCTGGCCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QRGGHTMGDGLDEDPVVESELPA*PPGPPA
Trigger: GGCTGGCGGGCCAGGAGGGCATGCAGGCAGTTCAGA...TTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp AACAGGTTGGACACGCGGTGGAACTGCTCGTACAGGTTCAGCGGCAGGAACGAGGTCGCTGTTCTGAACTaGCTGCATGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NRLDTRWNCSYRFSGRNEVAVLN*LHALLA
Trigger: GGCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGAC...CTCGTTCCTGCCGCTGAACCTGTACGAGCAGTTCCACCGCGTGTCCAACCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCAGACCTGCACCATCATaGTGGCCATGCTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFRPAPS*WPCSCR
Trigger: TCTACAAGAGCATGGCCAGCATGATGGTGCAGGTCT...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CCTGTGCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGGGGGGCAAGGATAGCTaGTCCTCCCCGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PVPLAIALGKTQIACCCWGGKDS*SSPGTS
Trigger: GCTGGTGCCCGGGGAGGAGCAGCTATCCTTGCCCCC...CCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp ACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCACCGTCGTGGGGCTCCGCGGATaGCAGCAGGACCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TIRACLNFKLVSPSMSTVVGLRG*QQDLSL
Trigger: AAGGCTCAGGTCCTGCTGGCATCCGCGGAGCCCCAC...GACGGTGGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CTTGTGTCTCCCCATGTCGTCCACCAGGTCCCGGGTGGCACGGATGAAGAGGAGAGAACCAGGGCAGCGTaGAGATGTCGGGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: LVSPHVVHQVPGGTDEEERTRAA*RCRECS
Trigger: AGAGCATTCCCGACATCTCCACGCTGCCCTGGTTCT...CTCCTCTTCATCCGTGCCACCCGGGACCTGGTGGACGACATGGGGAGACACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCGTGGCCAGTTCTTTGTaGGTGACCATCAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSVASSL*VTIRAC
Trigger: ACAGGCCCTGATGGTCACCCACAAAGAACTGGCCAC...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTGTGGCCAGTTCTTTGTaGGTGACCATCAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLVASSL*VTIRAC
Trigger: ACAGGCCCTGATGGTCACCCACAAAGAACTGGCCAC...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGTGCTGCGGGCCTTaGCAGGCACGTCCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: FKNADFSSEESGWLSNVSWCCGP*QARPAA
Trigger: AGCCGCAGGACGTGCCTGCCAAGGCCCGCAGCACCA...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCCGGCCTCGTCCCCGTTaGTCCGCACGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FKNADFSSEESGWLSNVSRPRPR*SARGAA
Trigger: TGCTGCACCTCGTGCGGACCAACGGGGACGAGGCCG...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGACGCACCATCACCGTGTaGCAGATGGCCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGRTITV*QMASRR
Trigger: GCGCCTGCTGGCCATCTGCCACACGGTGATGGTGCG...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AAGATGACTCGGAGGGCCAGGACAGGGAAGGTGTTTATGGACACACTCAGCAGGCGCACCATCACCGTGTaGCAGATGGCCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: KMTRRARTGKVFMDTLSRRTITV*QMASRR
Trigger: GCGCCTGCTGGCCATCTGCCACACGGTGATGGTGCG...CCTGCTGAGTGTGTCCATAAACACCTTCCCTGTCCTGGCCCTCCGAGTCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTGCAGATGGCGCCCTCTaGCTTTCGAACCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSADGAL*LSNQHR
Trigger: TCGGTGCTGGTTCGAAAGCCAGAGGGCGCCATCTGC...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTAGAGGAAATCCCTCCTaGACTGGCCGAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTRGNPS*TGRAPA
Trigger: GGCAGGAGCTCGGCCAGTCCAGGAGGGATTTCCTCT...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CCA 90 bp AGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTGCGGGCTCTGGAGTCCTaGGCTGGCGGTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RKACGVLVFRGRPPACWLRALES*AGGAAS
Trigger: GCTGGCTGCACCGCCAGCCCAGGACTCCAGAGCCCG...CAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATGAGGTGGTCACACCATaGGCGATGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHEVVTP*AMAWTK
Trigger: CTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTC...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGAGGGAGAAAGCATAGCTaGAACGGCGGGCACGAGACT +
Preference number: 4 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRGRKHS*NGGHET
Trigger: AGTCTCGTGCCCGCCGTTCCAGCTATGCTTTCTCCC...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTGGTCTTGTCTGGAAGTaGCACCGTCCCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSGLVWK*HRPLLG
Trigger: CCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACC...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCGGACCTGAGCCTTCCTaGGTCACGTCTGAGTCACCC +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLGPEPS*VTSESP
Trigger: GGGTGACTCAGACGTGACTCAGGAAGGCTCAGGTCC...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGGCCCAGGTGGTCGTTaGGGCTGGTGCTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWGPGGR*GWCCGP
Trigger: AGGCCCGCAGCACCAGCCTCAACGACCACCTGGGCC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCCCTGGTGGTACTTCTTaGCCAGGGCCACGATCAGGG +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGPGGTS*PGPRSG
Trigger: CCCTGATCGTGGCCCTGGTCAAGAAGTACCACCAGG...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp ATACAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATACGAAGTCGCTGTTCTaGACTGCCTGCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: IQGLAGEAVVAGKPDLHHTKSLF*TACMPS
Trigger: GGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGT...ATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR TCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTTCGTGGGGGATACTCTaGAGAGCCAGAAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSSWGIL*RARSSG
Trigger: CCCAGAGCTTCTGGCTCTTCAGAGTATCCCCCACGA...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CAGGAGAAGGTGGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCATCGTGGGGGATACTCTaGAGAGCCAGAAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QEKVASAWVTMTSPVPLASWGIL*RARSSG
Trigger: CCCAGAGCTTCTGGCTCTTCAGAGTATCCCCCACGA...TGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGGAGAGGACATCACGCTaGGGTCGGCATACAGAAACG +
Preference number: 4 (lower is better)
Translates to: GGAAGSRTGRARSRCSELERTSR*GRHTET
Trigger: CGTTTCTGTATGCCGACCTCAGCGTGATGTCCTCTC...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTGCCTGTTGCTGCTGGTaGGCACATATTTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTACCCW*AHIWGG
Trigger: CCCTCCCCAAATATGTGCTCACCAGCAGCAACAGGC...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp ACGGATGAAGAGGAGGCAGACCATAGGGGTACTGAGCGAGAACCAGGGCAGCGTGCCTGTTGCTGCTGGTaGGCACATATTTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TDEEEADHRGTEREPGQRACCCW*AHIWGG
Trigger: CCCTCCCCAAATATGTGCTCACCAGCAGCAACAGGC...ACGCTGCCCTGGTTCTCGCTCAGTACCCCTATGGTCTGCCTCCTCTTCATCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGCCCTCCTTGGGGGTGTaGGGCTCCTTTTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LFRNGVEGFKNADFSSEEPSLGV*GSFCQL
Trigger: GAGCTGGCAAAAGGAGCCTCACACCCCCAAGGAGGG...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGCCTGTGCCCGGTTCTaGAGCAGGAGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPDLVAESPPEICGSCLEACARF*SRRLAS
Trigger: GGAGGCCAGCCTCCTGCTGCAGAACCGGGCACAGGC...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCGTCCTGGGCTGGCGGTaGAGCCAGCGGGAGCCCGAA +
Preference number: 4 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSVLGWR*SQREPE
Trigger: TTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGAC...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTGTCCTGGGCTGGCGGTaGAGCCAGCGGGAGCCCGAA +
Preference number: 4 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSVLGWR*SQREPE
Trigger: TTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGAC...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp AAGATGACTCGGAGGGCCAGGACAGGGAAGGTGTTTATGGACACACTCAGCAGGACGATCAGGGCCTTCTaGTTGGGCGTCACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KMTRRARTGKVFMDTLSRTIRAF*LGVTRQ
Trigger: CTGCCGCGTGACGCCCAAGCAGAAGGCCCTGATCGT...CCTGCTGAGTGTGTCCATAAACACCTTCCCTGTCCTGGCCCTCCGAGTCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp GCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGTGAGCTCTGAACTGCCTGCATaGCCTCCTGGCCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALGNCSWKDSDSLLLLVSSELPA*PPGPPA
Trigger: GGCTGGCGGGCCAGGAGGGCATGCAGGCAGTTCAGA...GCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGAGTAGCGCAGGAACTTaGAGATCCGCACGTAGGACC +
Preference number: 4 (lower is better)
Translates to: GGAAGSRTGRARSRCSELSSAGT*RSARRT
Trigger: GGTCCTACGTGCGGATCTGCAAGTTCCTGCGCTACT...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp ACAGCAGGGACAGGCGCCTGGCGTAGAGGAAATCCCTCCTGGACTGGCCGAGCTAGACCTGCACCATCATaGTGGCCATGCTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: TAGTGAWRRGNPSWTGRARPAPS*WPCSCR
Trigger: TCTACAAGAGCATGGCCAGCATGATGGTGCAGGTCT...AGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR GCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTTGCCCCTGTGGCTGGTaGTTCTTCTTCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTCPCGW*FFFPRK
Trigger: CTTCCTGGGGAAGAAGAAGCACCAGCCACAGGGGCA...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAAGCATGCTGGTTGACTTaGAGCAGAACTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CGHAAPMHPREVVVVVFEACWLT*SRTGWS
Trigger: GCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGC...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTGGAAGGCCCCCTGCATaGTGGTTGACTTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSGRPPA*WLTCSR
Trigger: TCTGCTGCAAGTCAACCAGCATGCAGGGGGCCTTCC...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCTCCTGCCATTTCTTCTaGTTGAAGCTGCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSSCHFF*LKLRGE
Trigger: CTCTCCCCGCAGCTTCAAGCAGAAGAAATGGCAGGA...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGCGTGTCCCCAGGTCCTaGTGGGGCAGGGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKRVPRS*WGRAWL
Trigger: GAGCCAAGCCCTGCCCCACCAGGACCTGGGGACACG...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCAGGTGCCCCTCTGCCTaGGGAGTCTCCCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: FKNADFSSEESGWLSNVSRCPSA*GVSHPS
Trigger: GCTGGGATGGGAGACTCCCCAGGCAGAGGGGCACCT...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CCA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTGCTGGTGGGGCCTTCTaGTCTCCATTCATACTTCCT +
Preference number: 4 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLAGGAF*SPFILP
Trigger: AGGAAGTATGAATGGAGACCAGAAGGCCCCACCAGC...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGGGCTCCGTGCTaGCCAGCAAGAGCATGTCGG +
Preference number: 4 (lower is better)
Translates to: GVRLLLPALPERCGGLQKCWAPC*PARACR
Trigger: CCGACATGCTCTTGCTGGCCAGCACGGAGCCCAGCA...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCACCGTGTGGCAGATaGCCAGCAGGCGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLSPCGR*PAGART
Trigger: AGTTCTGGCGCCTGCTGGCCATCTGCCACACGGTGA...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGGTACAACAGCTGGTCTaGGCGCTCACGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LFRNGVEGFKNADFSSEEVQQLV*ALTGAL
Trigger: GAGAGCCCCCGTGAGCGCCCAGACCAGCTGTTGTAC...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGAGGCTGGCCTCCTGGTaGCGCTGCTGCCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKRLASW*RCCQSS
Trigger: CGAGGACTGGCAGCAGCGCCACCAGGAGGCCAGCCT...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AGAGGCTGTGGCTGGCTCTCAAATGACGACAGCTGGCTTTCTCTGTGCAACAGTTCTGCAGCAGGAGGCTaGCCTCCTGGTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGCGWLSNDDSWLSLCNSSAAGG*PPGGAA
Trigger: AGCAGCGCCACCAGGAGGCCAGCCTCCTGCTGCAGA...ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGAGAGCCAGCCACAGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTAGGGTCACCACCTGGTaGTACTTCTTGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSRVTTW*YFLTRA
Trigger: GGCCCTGGTCAAGAAGTACCACCAGGTGGTGACCCT...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTGCCAGGGTCACCACCTaGTGGTACTTCTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTARVTT*WYFLTR
Trigger: CCTGGTCAAGAAGTACCACCAGGTGGTGACCCTGGC...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTGCCAGGGTCACCACCTaGTGGTACTTCTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: GSRTGRARSRCSELPACPARVTT*WYFLTR
Trigger: CCTGGTCAAGAAGTACCACCAGGTGGTGACCCTGGC...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp CTTGTGTCTCCCCATGTCGTCCACCAGGTCCCGGGTGGCACGGATGAAGAGGAGCCCAATGTAGAGAACTaGCAGGGTGCTGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: LVSPHVVHQVPGGTDEEEPNVEN*QGAVQE
Trigger: CTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGG...CTCCTCTTCATCCGTGCCACCCGGGACCTGGTGGACGACATGGGGAGACACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCGGACCACCAGCAGGATaGAGGGAGAGGACATCACGC +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGGPPAG*RERTSR
Trigger: GCGTGATGTCCTCTCCCTCCATCCTGCTGGTGGTCC...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCATTCCAGGCACCCCACGAAGTGGTGCATCCGACTGTTAGGCGCCTCACACGTCCTGAAAGAAATGACTaGCTCCCCAGAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PFQAPHEVVHPTVRRLTRPERND*LPRGCG
Trigger: GCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGG...ACGTGTGAGGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCTGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCTCCGAGGAGTCTGGCTaGCTCTCCAACGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGSEESG*LSNVSW
Trigger: CCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGA...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCTGCAGCAGAACTGGCTaGAGCTTCTTCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFCSRTG*SFFFPG
Trigger: TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCA...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAGTGCTCCTGGGAGTCTaGGCGGGGCCAGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEVLLGV*AGPVPI
Trigger: AATGGGCACTGGCCCCGCTCAGACTCCCAGGAGCAC...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCCTTCCAGGTGAATGCTaGGTTCCTGTCCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSLPGEC*VPVLIL
Trigger: CAAGATGAGGACAGGAACTCAGCATTCACCTGGAAG...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCCAAAACCAGCATAAATaGCCAGTCCATAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFQNQHK*PVHSRC
Trigger: ACACCTGCTATGGACTGGTCATTTATGCTGGTTTTG...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TGGGTGACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCGCACGTCCCAGTCGATaGAGACGCTGTTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: WVTIRACLNFKLVSPSMSARPSR*RRCSPG
Trigger: ACCTGGGGAACAGCGTCTTCATCGACTGGGACGTGC...GGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGTCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp CTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGAAATCGGGTCGTGGCCTCTaGATCCGGCCCATAGACGCG +
Preference number: 4 (lower is better)
Translates to: LCLGDNDLSCALGNCSWKSGRGL*IRPIDA
Trigger: CGCGTCTATGGGCCGGATTCAGAGGCCACGACCCGA...TTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CACCACGGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTTCGGGTCGTGGCCTCTaGATCCGGCCCATAGACGCG +
Preference number: 4 (lower is better)
Translates to: HHGDEDHNHQLVHQEVQLSGRGL*IRPIDA
Trigger: CGCGTCTATGGGCCGGATTCAGAGGCCACGACCCGA...AAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCCGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp ATCAGAATCTGGCAGGGTCTGTTGTTGATGGCTCTGTCACTCTTGTGTCTCCCCTCACGCGGCAGCAGATaGCCGCCTGGCACTTGGACG +
Preference number: 4 (lower is better)
Translates to: IRIWQGLLLMALSLLCLPSRGSR*PPGTWT
Trigger: CGTCCAAGTGCCAGGCGGTCATCTGCTGCCGCGTGA...GGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCACGAAGTCGCTGTTCTaGACTGCCTGCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLTKSLF*TACMPS
Trigger: GGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGT...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGGACTCCCGGTGTACATaGGGCAAGGGCTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: LFRNGVEGFKNADFSSEEDSRCT*GKGSMV
Trigger: CACCATGGAGCCCTTGCCTCATGTACACCGGGAGTC...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTCCTGAGGTGTCACTGTaGCTCTTTTGGGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSPEVSL*LFWARS
Trigger: GCTTCGAGCCCAAAAGAGTCACAGTGACACCTCAGG...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AGCAGGGACAGGCGCCAGGAAGTCTCCGTTAATGACCAAGGCCAGCTTGACCTGCCTGAGGTGTCACTGTaGCTCTTTTGGGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: SRDRRQEVSVNDQGQLDLPEVSL*LFWARS
Trigger: GCTTCGAGCCCAAAAGAGTCACAGTGACACCTCAGG...CAGGTCAAGCTGGCCTTGGTCATTAACGGAGACTTCCTGGCGCCTGTCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATCTCACCTCCGCGGATaGCAGCAGGACCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GVRLLLPALPERCGGLQKSHLRG*QQDLSL
Trigger: AAGGCTCAGGTCCTGCTGGCATCCGCGGAGGTGAGA...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGGCCGAGGCTGCCCATaGTGGTGGGGCCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWGRGCP*WWGLLV
Trigger: GACCAGAAGGCCCCACCAGCATGGGCAGCCTCGGCC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp CTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGAAACTCTCTGGCCGAGGCTaGCCATGCTGGTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LCLGDNDLSCALGNCSWKLSGRG*PCWWGL
Trigger: AAGGCCCCACCAGCATGGGCAGCCTCGGCCAGAGAG...TTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR GCA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCATGTCGGGAATGCTCTaGAGGATGATGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPMSGML*RMMMMR
Trigger: CCTCATCATCATCATCCTGCAGAGCATTCCCGACAT...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCCCACGCACAGATCCTaGCATTTCTTCTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFPTHRS*HFFCLK
Trigger: CTTCAAGCAGAAGAAATGGCAGGATCTGTGCGTGGG...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCGGCTGCTGGGCTCCGTaGTGGCCAGCAAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: FKNADFSSEESGWLSNVSGCWAP*WPARAC
Trigger: ACATGCTCTTGCTGGCCAGCACGGAGCCCAGCAGCC...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGACACCCCACGAAGTGGTaGATCCGACTGTTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGHPTKW*IRLLGA
Trigger: GGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTG...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTGACTCTGCGGCCACGCTaGTCCCATGCACCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: RKACGVLVFRGRPPACWLTLRPR*SHAPPR
Trigger: TCTCGGGGGTGCATGGGAGCAGCGTGGCCGCAGAGT...CAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAAGCCGAAGTTCCGGGCTaGGGTGACCAGCGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKAEVPG*GDQRPL
Trigger: GAGGGGGCGCTGGTCACCGCAGCCCGGAACTTCGGC...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTCTGTTGCAGGGCCTGTaGCCGGTTCTGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: APFASSSGTVWRASKMLTLLQGL*PVLQQE
Trigger: CTCCTGCTGCAGAACCGGGCACAGGCCCTGCAACAG...AGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGGTCGCTGTTCTGAACTaGCTGCATGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEEVAVLN*LHALLA
Trigger: GGCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGAC...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTAGTAGCGCAGGAACTTaGAGATCCGCACGTAGGACC +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSSSAGT*RSARRT
Trigger: GGTCCTACGTGCGGATCTGCAAGTTCCTGCGCTACT...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGATCCACCTCCATAGGCTaGTCGCTCGTGGACGTGGAC +
Preference number: 4 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGSTSIG*SLVDVD
Trigger: GTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGA...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGGACATCTTCCTGATATaGCAGCGTGACTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSADIFLI*QRDSFG
Trigger: CCCAAAGGAGTCACGCTGGCATATCAGGAAGATGTC...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTAGGTTGGACACGCGGTaGAACTGCTCGTACAGGTTC +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSRLDTR*NCSYRF
Trigger: GAACCTGTACGAGCAGTTCCACCGCGTGTCCAACCT...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGGAGAAGGTGGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCACAAGAGCATGTCGGCTaGGACGATGTTGTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: QEKVASAWVTMTSPVPLAQEHVG*DDVVLA
Trigger: CGCAAGGACAACATCGTCCCAGCCGACATGCTCTTG...TGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAAAAGATGTATTCCACCTaGCCCAGGTGGTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CGHAAPMHPREVVVVVFEKMYST*PRWSLR
Trigger: CCTCAACGACCACCTGGGCCAGGTGGAATACATCTT...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGAGCAGGGCCGCATTGTaGAAGAGCAGCTTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: LFRNGVEGFKNADFSSEESRAAL*KSSFPS
Trigger: CGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCT...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATCACCGTGTGGCAGATaGCCAGCAGGCGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: GVRLLLPALPERCGGLQKSPCGR*PAGART
Trigger: AGTTCTGGCGCCTGCTGGCCATCTGCCACACGGTGA...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGAAATCGGGGGAGGCCGCCTaGTACAACAGCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LCLGDNDLSCALGNCSWKSGEAA*YNSWSG
Trigger: CCCAGACCAGCTGTTGTACCAGGCGGCCTCCCCCGA...TTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGAATCGTGACGGTGTCCTaGGTGCGGGACAGGAACACG +
Preference number: 4 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGIVTVS*VRDRNT
Trigger: CGTGTTCCTGTCCCGCACCCAGGACACCGTCACGAT...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTTGGTGTACAGGCAGATaGCGCCCTCTGGCTTTCGAA +
Preference number: 4 (lower is better)
Translates to: GSRTGRARSRCSELPACPWCTGR*RPLAFE
Trigger: TTCGAAAGCCAGAGGGCGCCATCTGCCTGTACACCA...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCGCGACAGGGACTCCCTaGTTAGAAGGTTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFATGTP*LEGCYC
Trigger: ACAGTAACAACCTTCTAACCAGGGAGTCCCTGTCGC...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGTGAGCGCAGGGACAGGCGCCTaGCGTAGAGGAAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: ALGNCSWKDSDSLLLLVSAGTGA*RRGNPS
Trigger: GGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGC...GCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CCA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGACCGCAAAGGACTGGTaGTCGCTGAAGCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEETAKDW*SLKLAG
Trigger: ACCCGCCAGCTTCAGCGACCACCAGTCCTTTGCGGT...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTTCTTCCGGAACGGTGTaGAGGGCTTCAAAAATGCTG +
Preference number: 4 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLSSGTV*RASKML
Trigger: CAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGA...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTTCGGGCGGAGGTGCTaGGCATGGGGCCAGACGTGG +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWFGRRC*AWGQTW
Trigger: CCACGTCTGGCCCCATGCCCAGCACCTCCGCCCGAA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCTGCCCATTCACCGCATaGGGAAAAGGGAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGCPFTA*GKGRFR
Trigger: CCTGAACCTCCCTTTTCCTCATGCGGTGAATGGGCA...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCTGTGCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGGATGCCAGCAGGACCTaGGCCTTCCTGAGTCACGTC +
Preference number: 4 (lower is better)
Translates to: PVPLAIALGKTQIACCCWDASRT*AFLSHV
Trigger: GACGTGACTCAGGAAGGCTCAGGTCCTGCTGGCATC...CCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGGCAAGCGTTCGAAGATaGCCGTGTCGGCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKASVRR*PCRRPW
Trigger: CCAAGGGCGCCGACACGGTCATCTTCGAACGCTTGC...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTCCTGGCAATGAGCATATTCTCTaGCAGCAGCTCGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: RTGRARSRCSELPACPPGNEHIL*QQLAGE
Trigger: TTCGCCTGCGAGCTGCTGTCAGAGAATATGCTCATT...GCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR TCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATTGCTGTACAGGAGGTTaGAAAGAGCCAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHCCTGG*KEPGTI
Trigger: GATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCA...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR TCA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAAGGAAGGACATCTTCCTaGGGTGTCACTGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: CGHAAPMHPREVVVVVFEGRTSS*GVTVTL
Trigger: AAGAGTCACAGTGACACCTCAGGAAGATGTCCTTCC...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCCCTGATATGCCAGCGTaGCTCCTTTGGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGPDMPA*LLWARR
Trigger: TCTTCGAGCCCAAAGGAGTCACGCTGGCATATCAGG...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTGTGCCTCCTCTCAGGTaGCCCTCTGCCTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGVPPLR*PSAWGV
Trigger: GACTCCCCAGGCAGAGGGGCACCTGAGAGGAGGCAC...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR GCA 90 bp AAGAATGTGACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTCCAGGCTGGGCCTTGTaGCTCCTCTCAGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KNVTSPWSTATSQEKVASPGWAL*LLSGAP
Trigger: AGGGGCACCTGAGAGGAGGCACAAGGCCCAGCCTGG...AGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCCAGGCTGGGCCTTGTaGCTCCTCTCAGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWPGWAL*LLSGAP
Trigger: AGGGGCACCTGAGAGGAGGCACAAGGCCCAGCCTGG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp ATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATGCCGAAGTTCCGGGCTaGGGTGACCAGCGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: IFGEGRLVFWMKSGLSIHAEVPG*GDQRPL
Trigger: GAGGGGGCGCTGGTCACCGCAGCCCGGAACTTCGGC...ATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTCCTGGCAGACCTGCACCATCATaGTGGCCATGCTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RTGRARSRCSELPACPPGRPAPS*WPCSCR
Trigger: TCTACAAGAGCATGGCCAGCATGATGGTGCAGGTCT...GCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp ACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCACCGTCAAGAGCTCGTCCTTCTaGCCCACCACGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: TIRACLNFKLVSPSMSTVKSSSF*PTTYSS
Trigger: GGAGCTGTACGTGGTGGGGCAGAAGGACGAGCTCTT...GACGGTGGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAAGCAGAGGGCAATGACTaGTCCTCTGGGGGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: GVRLLLPALPERCGGLQKAEGND*SSGGKD
Trigger: ATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGC...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCGCATGCTGGTTGACTTaGAGCAGAACTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGACWLT*SRTGWS
Trigger: GCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGC...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGAGATTCGGGCGGAGGTaGTGGGCATGGGGCCAGACG +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWRFGRR*WAWGQT
Trigger: CGTCTGGCCCCATGCCCAGCACCTCCGCCCGAATCT...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp GCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGTGAGCCCGAGCCCTAAGCTCTaGAAGGGTTCGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ALGNCSWKDSDSLLLLVSPSPKL*KGSPSG
Trigger: CCCTGATGGCGAACCCTTGCAGAGCTTAGGGCTCGG...GCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CCTGTGCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGCCCGTGGGGGCAGACTaGGGATTGGAGAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PVPLAIALGKTQIACCCWPVGAD*GLESWR
Trigger: TCTCCAACTCTCCAATCCCCAGTCTGCCCCCACGGG...CCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTCGAGGCTGCCCATGCTaGTGGGGCCTTCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGRGCPC*WGLLVS
Trigger: GGAGACCAGAAGGCCCCACCAGCATGGGCAGCCTCG...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CCA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGATGGAGATCTTCTCTCTaGCCGAGGCTGCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGWRSSL*PRLPML
Trigger: CAGCATGGGCAGCCTCGGCCAGAGAGAAGATCTCCA...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGTTCCCCATCAGAATCTaGCAGGGTCTGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSAFPIRI*QGLLLM
Trigger: CATCAACAACAGACCCTGCCAGATTCTGATGGGGAA...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAACATAGCACAGGCTGCTaGGCTCCGTGCTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPDLVAESPPEICGSCLEHSTGC*APCWPA
Trigger: TGCTGGCCAGCACGGAGCCCAGCAGCCTGTGCTATG...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGAGGCACCCCACGAAGTaGTGCATCCGACTGTTAGGC +
Preference number: 4 (lower is better)
Translates to: LFRNGVEGFKNADFSSEERHPTK*CIRLLG
Trigger: GCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCT...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ATGAACTCGGACAGGATGAACATGGACATCGGGATGGTGACGCTGAGCAGGATGGCAGATGGCGCCCTCTaGCTTTCGAACCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: MNSDRMNMDIGMVTLSRMADGAL*LSNQHR
Trigger: TCGGTGCTGGTTCGAAAGCCAGAGGGCGCCATCTGC...CATCCTGCTCAGCGTCACCATCCCGATGTCCATGTTCATCCTGTCCGAGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAAGCGACAGGGACTCCCTaGTTAGAAGGTTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: CGHAAPMHPREVVVVVFEATGTP*LEGCYC
Trigger: ACAGTAACAACCTTCTAACCAGGGAGTCCCTGTCGC...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CCTCCGCAGAATTGTGCCCTGAGTGATGAGGTTTGCATATCCCTCACGGTGGGAAGGGTCACCACCTGGTaGTACTTCTTGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPQNCALSDEVCISLTVGRVTTW*YFLTRA
Trigger: GGCCCTGGTCAAGAAGTACCACCAGGTGGTGACCCT...TCCCACCGTGAGGGATATGCAAACCTCATCACTCAGGGCACAATTCTGCGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CCTCCGCAGAATTGTGCCCTGAGTGATGAGGTTTGCATATCCCTCACGGTGGGAGCCAGGGTCACCACCTaGTGGTACTTCTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: PPQNCALSDEVCISLTVGARVTT*WYFLTR
Trigger: CCTGGTCAAGAAGTACCACCAGGTGGTGACCCTGGC...TCCCACCGTGAGGGATATGCAAACCTCATCACTCAGGGCACAATTCTGCGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATCCTGCACCATCATGCTaGCCATGCTCTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHPAPSC*PCSCRR
Trigger: TCTTCTACAAGAGCATGGCCAGCATGATGGTGCAGG...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp TGGGTGACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCGAGGTGGTCACACCATaGGCGATGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: WVTIRACLNFKLVSPSMSEVVTP*AMAWTK
Trigger: CTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTC...GGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTGGACCACCAGCAGGATaGAGGGAGAGGACATCACGC +
Preference number: 4 (lower is better)
Translates to: APFASSSGTVWRASKMLTGPPAG*RERTSR
Trigger: GCGTGATGTCCTCTCCCTCCATCCTGCTGGTGGTCC...AGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCTGTGCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGGCACCGTCCCCTCCTTaGGGGTGTGAGGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PVPLAIALGKTQIACCCWAPSPP*GCEAPF
Trigger: AAAAGGAGCCTCACACCCCCAAGGAGGGGACGGTGC...CCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCGGCTTCTCCAGGCTCTGCTCTGCGCTCACGTCCTGCTCAAAGAGCCCAATGTTTCTTCCAGACTTGGTaGCAGAGTCTCCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: PASPGSALRSRPAQRAQCFFQTW*QSLHLR
Trigger: TCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAGAA...ACATTGGGCTCTTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTCGATTCTTCCAGACTTaGTGGCAGAGTCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSRFFQT*WQSLHL
Trigger: CAGGTGGAGACTCTGCCACCAAGTCTGGAAGAATCG...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGATCGAGGACCCAGCTaGGAGCTCAGGTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWDRGPS*ELRCRG
Trigger: GCCCCGACACCTGAGCTCCCAGCTGGGTCCTCGATC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR CAA 72 bp GCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTaGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AARSWTWTILPD*VAESPPEICGS
Trigger: AGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCTCCGCAGAATTGTGCCCTGAGTGATGAGGTTTGCATATCCCTCACGGTGGGATGCCCATTCACCGCATaGGGAAAAGGGAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PPQNCALSDEVCISLTVGCPFTA*GKGRFR
Trigger: CCTGAACCTCCCTTTTCCTCATGCGGTGAATGGGCA...TCCCACCGTGAGGGATATGCAAACCTCATCACTCAGGGCACAATTCTGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp TGGGTGACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCCCTGGACCTTCCAGGTaGATGCTGAGTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WVTIRACLNFKLVSPSMSPGPSR*MLSSCP
Trigger: AGGACAGGAACTCAGCATTCACCTGGAAGGTCCAGG...GGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGTCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAACCTGGTGGTACTTCTTaGCCAGGGCCACGATCAGGG +
Preference number: 4 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEPGGTS*PGPRSG
Trigger: CCCTGATCGTGGCCCTGGTCAAGAAGTACCACCAGG...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR TCA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCGGGCTTCAAAAATGCTaGCTTCTCCTCCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGGLQKC*LLLRGV
Trigger: GACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCC...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTCTCAGGTGCCCCTCTaGCTGGGGAGTCTCCCATCC +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWSQVPL*LGSLPS
Trigger: GGATGGGAGACTCCCCAGGCAGAGGGGCACCTGAGA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp ATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATGGCCGAGGCTGCCCATaGTGGTGGGGCCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: IFGEGRLVFWMKSGLSIHGRGCP*WWGLLV
Trigger: GACCAGAAGGCCCCACCAGCATGGGCAGCCTCGGCC...ATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCCACATAGCACAGGCTaGTGGGCTCCGTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWPHSTG*WAPCWP
Trigger: TGGCCAGCACGGAGCCCAGCAGCCTGTGCTATGTGG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp AAGAATGTGACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTCCACATAGCACAGGCTaGTGGGCTCCGTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KNVTSPWSTATSQEKVASPHSTG*WAPCWP
Trigger: TGGCCAGCACGGAGCCCAGCAGCCTGTGCTATGTGG...AGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGTGGCAAATTCCATTaGCCCCCTCCTGTGCAAGCG +
Preference number: 4 (lower is better)
Translates to: GVRLLLPALPERCGGLQKCGKFH*PPPVQA
Trigger: CGCTTGCACAGGAGGGGGGCAATGGAATTTGCCACA...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCAACGAAGGCGCGCTCCTaGAGCACCTCGGAGCTACGG +
Preference number: 4 (lower is better)
Translates to: HIWGGQVGFLDEERIVYPTKARS*STSELR
Trigger: CCGTAGCTCCGAGGTGCTGCAGGAGCGCGCCTTCGT...TGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGAAAGTCGCTGTTCTGAACTaGCTGCATGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LCLGDNDLSCALGNCSWKVAVLN*LHALLA
Trigger: GGCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGAC...TTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCGGCTTCTCCAGGCTCTaGTCTGCGCTCACGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSGFSRL*SALTSC
Trigger: GCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCC...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp GCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTGCCCCTGTGGCTGGTaGTTCTTCTTCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: APFASSSGTVWRASKMLTCPCGW*FFFPRK
Trigger: CTTCCTGGGGAAGAAGAAGCACCAGCCACAGGGGCA...AGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAACAGCTCTGGTGCTCCTaGGAGTCTGAGCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKQLWCS*ESERGQ
Trigger: CTGGCCCCGCTCAGACTCCCAGGAGCACCAGAGCTG...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTGGAGATCTTCTCTCTaGCCGAGGCTGCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: APFASSSGTVWRASKMLTWRSSL*PRLPML
Trigger: CAGCATGGGCAGCCTCGGCCAGAGAGAAGATCTCCA...AGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGGGAGTCTGTCCTCGATaGCTGTGGCTCCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKGVCPR*LWLPAA
Trigger: AGCTGCTGGGAGCCACAGCCATCGAGGACAGACTCC...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CCA 90 bp AAGAATGTGACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTCAGCAGATGACCGCCTaGCACTTGGACGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KNVTSPWSTATSQEKVASQQMTA*HLDARS
Trigger: GGACCTGGCGTCCAAGTGCCAGGCGGTCATCTGCTG...AGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ATACAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCCTGCACCATCATGCTaGCCATGCTCTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: IQGLAGEAVVAGKPDLHHPAPSC*PCSCRR
Trigger: TCTTCTACAAGAGCATGGCCAGCATGATGGTGCAGG...ATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGAGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAATCACACCATGGGCGATaGCTTGGACGAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: QRGGHTMGDGLDEDPVVESHHGR*LGRRPS
Trigger: ACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGA...TTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTAAGAGCCAGAAGCTCTaGGTGGTGGTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: GSRTGRARSRCSELPACPKSQKL*VVVVMM
Trigger: CATCATGACTACCACCACCCAGAGCTTCTGGCTCTT...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTGGGAGAAAGCATAGCTaGAACGGCGGGCACGAGACT +
Preference number: 4 (lower is better)
Translates to: APFASSSGTVWRASKMLTGRKHS*NGGHET
Trigger: AGTCTCGTGCCCGCCGTTCCAGCTATGCTTTCTCCC...AGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGGGGAGCTGTACTTCCTaGGAGGACACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKGSCTS*EDTCPC
Trigger: ACAGGGGCAGGTGTCCTCCCAGGAAGTACAGCTCCC...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGGGGCTGGCCGGTGAAGCCGTTGTAGCAGGCAAACCAGACCTGCACCATCATGGCAGGTTGGTTTTCTaGATGAAGAGCGGATTGTCT +
Preference number: 4 (lower is better)
Translates to: QGLAGEAVVAGKPDLHHHGRLVF*MKSGLS
Trigger: AGACAATCCGCTCTTCATCCAGAAAACCAACCTGCC...ATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCTTGGCAATTGCTCTTaGAAAGACTCAGATAGCCTG +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFLGNCS*KDSDSL
Trigger: CAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAG...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTTTCTTCCAGACTTGGTaGCAGAGTCTCCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTFFQTW*QSLHLR
Trigger: TCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAGAA...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCCGATTCTTCCAGACTTaGTGGCAGAGTCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLRFFQT*WQSLHL
Trigger: CAGGTGGAGACTCTGCCACCAAGTCTGGAAGAATCG...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGCATGGGGCCAGACGTaGCTCTGGTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWAWGQT*LWFSGT
Trigger: GGTGCCTGAGAACCAGAGCCACGTCTGGCCCCATGC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR CAA 72 bp GTTGACCAGAGAGGTGGTCACACCATGGGCGATGGCTaGGACGAAGACCCAGTAGTTGAAGAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: VDQRGGHTMGDG*DEDPVVEELVL
Trigger: AAGGACGAGCTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCTCTGGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
3UTR CAA 72 bp AGGAGGATGGTCGCCACGCACAGGGCGGTCCAGTACTaGATGATAAGAATGACCTCCATGGTGATGGACAGC +
Preference number: 4 (lower is better)
Translates to: RRMVATHRAVQY*MIRMTSMVMDS
Trigger: GCTGTCCATCACCATGGAGGTCATTCTTATCATCAAGTACTGGACCGCCCTGTGCGTGGCGACCATCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGCACGTCCCAGTCGATaGAGACGCTGTTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWARPSR*RRCSPG
Trigger: ACCTGGGGAACAGCGTCTTCATCGACTGGGACGTGC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp CCTCCGCAGAATTGTGCCCTGAGTGATGAGGTTTGCATATCCCTCACGGTGGGAGGAAGGACATCTTCCTaGTATGCCAGCGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: PPQNCALSDEVCISLTVGGRTSS*YASVTP
Trigger: AGGAGTCACGCTGGCATATCAGGAAGATGTCCTTCC...TCCCACCGTGAGGGATATGCAAACCTCATCACTCAGGGCACAATTCTGCGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTGCCATTTCTTCTGCTTaGAGCTGCGGGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSAISSA*SCGERG
Trigger: CCCCCTCTCCCCGCAGCTTCAAGCAGAAGAAATGGC...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTCTCACCTCCGCGGATaGCAGCAGGACCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWSHLRG*QQDLSL
Trigger: AAGGCTCAGGTCCTGCTGGCATCCGCGGAGGTGAGA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGACGAAGAAGGACTCTaGGGCCACGCTGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWDEEGL*GHAAPM
Trigger: CATGGGAGCAGCGTGGCCGCAGAGTCCTTCTTCGTC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAAGACTGGCCGAGCTCCTaGCACGCCTCGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKDWPSS*HASSMF
Trigger: GAACATGGACGAGGCGTGGCAGGAGCTCGGCCAGTC...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR GCA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAACTCCAGGCTCTGCTCTaGGCTCACGTCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LLKEPNVENWQGAVQEVELQALL*AHVLLK
Trigger: TTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAG...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR GCA 90 bp CCGGCTTCTCCAGGCTCTGCTCTGCGCTCACGTCCTGCTCAAAGAGCCCAATGTTGTGCCCTTGGCAATTaGTCTTGGAAAGACTCAGAT +
Preference number: 4 (lower is better)
Translates to: PASPGSALRSRPAQRAQCCALGN*SWKDSD
Trigger: ATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACA...ACATTGGGCTCTTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR GCA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAGCAGAGGGCAATGACTaGTCCTCTGGGGGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEAEGND*SSGGKD
Trigger: ATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGC...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTTTCCCCATCAGAATCTaGCAGGGTCTGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GSRTGRARSRCSELPACPFPIRI*QGLLLM
Trigger: CATCAACAACAGACCCTGCCAGATTCTGATGGGGAA...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTATCGTGACGGTGTCCTaGGTGCGGGACAGGAACACG +
Preference number: 4 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGIVTVS*VRDRNT
Trigger: CGTGTTCCTGTCCCGCACCCAGGACACCGTCACGAT...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTCACACCATGGGCGATaGCTTGGACGAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: FKNADFSSEESGWLSNVSSHHGR*LGRRPS
Trigger: ACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGA...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGAGGTGGTCACACCATaGGCGATGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: LPDLVAESPPEICGSCLEEVVTP*AMAWTK
Trigger: CTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTC...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCCAGGGAAGGTGTTTATaGACACACTCAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLQGRCL*THSAGP
Trigger: TGGTCCTGCTGAGTGTGTCCATAAACACCTTCCCTG...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CTCCCGGTGTACATGAGGCAAGGGCTCCATGGTGAAAATCTCCTCGCTGGGGCCCTTGGCAATTGCTCTTaGAAAGACTCAGATAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPVYMRQGLHGENLLAGALGNCS*KDSDSL
Trigger: CAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAG...GGCCCCAGCGAGGAGATTTTCACCATGGAGCCCTTGCCTCATGTACACCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AGAGGCTGTGGCTGGCTCTCAAATGACGACAGCTGGCTTTCTCTGTGCAACAGTTTTGTGGGTCTTGTCTaGAAGTGGCACCGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RGCGWLSNDDSWLSLCNSFVGLV*KWHRPL
Trigger: GAGGGGACGGTGCCACTTCCAGACAAGACCCACAAA...ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGAGAGCCAGCCACAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGTGAGCGCTCGCTCGTGGACGTaGACGATTCTTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: ALGNCSWKDSDSLLLLVSARSWT*TILPDL
Trigger: CAAGTCTGGAAGAATCGTCCACGTCCACGAGCGAGC...GCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCTGGCTACGGTTCCCTaGTTCAGATTCGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWLATVP*FRFGRR
Trigger: CCTCCGCCCGAATCTGAACCAGGGAACCGTAGCCAG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR CAA 72 bp GTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTaGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLVFRGRPPACW*TCSRTGWSFFF
Trigger: GAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CAA 72 bp GTCGGACTCTTCCCCATCAGAATCTGGCAGGGTCTGTaGTTGATGGCTCTGTCACTCTTGTGTCTCCCCATG +
Preference number: 4 (lower is better)
Translates to: VGLFPIRIWQGL*LMALSLLCLPM
Trigger: CATGGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGATGGGGAAGAGTCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp CAGGAGAAGGTGGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCACAAAACCAGCATAAATaGCCAGTCCATAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QEKVASAWVTMTSPVPLAQNQHK*PVHSRC
Trigger: ACACCTGCTATGGACTGGTCATTTATGCTGGTTTTG...TGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAACGTAGAAACCAAGGCTaGGGAGGATGGTCGCCACGC +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKRRNQG*GGWSPR
Trigger: GCGTGGCGACCATCCTCCTCAGCCTTGGTTTCTACG...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGGAGAGGACATCACGCTaGGGTCGGCATACAGAAACG +
Preference number: 4 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKERTSR*GRHTET
Trigger: CGTTTCTGTATGCCGACCTCAGCGTGATGTCCTCTC...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAGCAAGGGCTCCATGGTaGAAATCTCCTCGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRARAPW*KSPRWG
Trigger: GCCCCAGCGAGGAGATTTTCACCATGGAGCCCTTGC...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGGGAAGGACATCTTCCTaGGGTGTCACTGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: LFRNGVEGFKNADFSSEEGRTSS*GVTVTL
Trigger: AAGAGTCACAGTGACACCTCAGGAAGATGTCCTTCC...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCCTCCTGAAAAGAATGTaGCCTCTCCTTGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: GVEGFKNADFSSEESGWLLLKRM*PLLGQQ
Trigger: CTGTTGACCAAGGAGAGGTCACATTCTTTTCAGGAG...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCGGCAGAGTCTCCACCTaGGATTTGTGGGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: FKNADFSSEESGWLSNVSGRVST*DLWVLS
Trigger: AGACAAGACCCACAAATCTCAGGTGGAGACTCTGCC...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAAGACGAAGAAGGACTCTaGGGCCACGCTGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKDEEGL*GHAAPM
Trigger: CATGGGAGCAGCGTGGCCGCAGAGTCCTTCTTCGTC...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTCTCCAGGCTCTGCTCTaGGCTCACGTCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGLQALL*AHVLLK
Trigger: TTTGAGCAGGACGTGAGCGCAGAGCAGAGCCTGGAG...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGGAGAAGGTGGCCTCTaGTTGGGTGACAATGACCTC +
Preference number: 4 (lower is better)
Translates to: LPDLVAESPPEICGSCLEGEGGL*LGDNDL
Trigger: GAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCC...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTAAGATGTATTCCACCTaGCCCAGGTGGTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: APFASSSGTVWRASKMLTKMYST*PRWSLR
Trigger: CCTCAACGACCACCTGGGCCAGGTGGAATACATCTT...AGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGTGGTGTACAGGCAGATaGCGCCCTCTGGCTTTCGAA +
Preference number: 4 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKWCTGR*RPLAFE
Trigger: TTCGAAAGCCAGAGGGCGCCATCTGCCTGTACACCA...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGTGAGCCCCAATGTAGAGAACTaGCAGGGTGCTGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: ALGNCSWKDSDSLLLLVSPNVEN*QGAVQE
Trigger: CTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGG...GCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAATCACACCATGGGCGATaGCTTGGACGAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: LLKEPNVENWQGAVQEVESHHGR*LGRRPS
Trigger: ACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGA...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAACCGCAAAGGACTGGTaGTCGCTGAAGCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRTAKDW*SLKLAG
Trigger: ACCCGCCAGCTTCAGCGACCACCAGTCCTTTGCGGT...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTCCCAGAGGCTGTGGCTaGCTCTCAAATGACGACAGC +
Preference number: 4 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSPRGCG*LSNDDS
Trigger: GCTGTCGTCATTTGAGAGCCAGCCACAGCCTCTGGG...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGAAACCTGAAAGAAATGACTaGCTCCCCAGAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LCLGDNDLSCALGNCSWKPERND*LPRGCG
Trigger: GCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGG...TTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGACTCCTCCGAGGAGTCTaGCTGGCTCTCCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRLLRGV*LALQRQ
Trigger: CTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAG...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CAA 72 bp GCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTaGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGT +
Preference number: 4 (lower is better)
Translates to: ASAWVTMTSPVP*AIALGKTQIAC
Trigger: ACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AAGAATGTGACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTCCTGGACCTTCCAGGTaGATGCTGAGTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KNVTSPWSTATSQEKVASPGPSR*MLSSCP
Trigger: AGGACAGGAACTCAGCATTCACCTGGAAGGTCCAGG...AGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCCTGGACCTTCCAGGTaGATGCTGAGTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWPGPSR*MLSSCP
Trigger: AGGACAGGAACTCAGCATTCACCTGGAAGGTCCAGG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTGGATCACCTTCTCCTTaGACTGCCCGTTGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGGSPSP*TARCRH
Trigger: GTGCCTACAACGGGCAGTTCAAGGAGAAGGTGATCC...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGGATCACCTTCTCCTTaGACTGCCCGTTGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWGSPSP*TARCRH
Trigger: GTGCCTACAACGGGCAGTTCAAGGAGAAGGTGATCC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGGCAGGGTCTGTTGTTaGTGGCTCTGTCACTCTTGT +
Preference number: 4 (lower is better)
Translates to: LPDLVAESPPEICGSCLEGRVCC*WLCHSC
Trigger: ACAAGAGTGACAGAGCCATCAACAACAGACCCTGCC...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCCATCAGGGCCTGTCTaGACTTCAAGTTGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWPSGPV*TSSWSP
Trigger: GGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp AGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTGGGCAGAGTCTCCACCTaGGATTTGTGGGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RKACGVLVFRGRPPACWLGRVST*DLWVLS
Trigger: AGACAAGACCCACAAATCTCAGGTGGAGACTCTGCC...CAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCACCCCTGCATGCTGGTTaGCTTGCAGCAGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: HIWGGQVGFLDEERIVYPPLHAG*LAAELA
Trigger: AGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGG...TGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAAATGTCGGGAATGCTCTaGAGGATGATGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: GVRLLLPALPERCGGLQKMSGML*RMMMMR
Trigger: CCTCATCATCATCATCCTGCAGAGCATTCCCGACAT...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGGACGATGTTGTCCTTaGGGAGACAGACCACATCCC +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWGRCCP*GDRPHP
Trigger: GGGATGTGGTCTGTCTCCGCAAGGACAACATCGTCC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAACTCGGAGGAGGAGGTTaGCAATGTCCAGGGAGTATT +
Preference number: 4 (lower is better)
Translates to: LPDLVAESPPEICGSCLELGGGG*QCPGSI
Trigger: AATACTCCCTGGACATTGGCAACCTCCTCCTCCGAG...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTAGAACCAGGGCAGCGTaGAGATGTCGGGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGRTRAA*RCRECS
Trigger: AGAGCATTCCCGACATCTCCACGCTGCCCTGGTTCT...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGAGAACCAGGGCAGCGTaGAGATGTCGGGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWRTRAA*RCRECS
Trigger: AGAGCATTCCCGACATCTCCACGCTGCCCTGGTTCT...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCAAGAGCATGTCGGCTaGGACGATGTTGTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWQEHVG*DDVVLA
Trigger: CGCAAGGACAACATCGTCCCAGCCGACATGCTCTTG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGATGCAGGAAGCAGAACTaGCCGAGCACGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRCRKQN*PSTKSL
Trigger: CAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCA...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCTGTGCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGCCTGCACCATCATGCTaGCCATGCTCTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVPLAIALGKTQIACCCWPAPSC*PCSCRR
Trigger: TCTTCTACAAGAGCATGGCCAGCATGATGGTGCAGG...CCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAACCCAATGTAGAGAACTaGCAGGGTGCTGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEPNVEN*QGAVQE
Trigger: CTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGG...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCCAGGGAAGGTGTTTATaGACACACTCAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: FKNADFSSEESGWLSNVSQGRCL*THSAGP
Trigger: TGGTCCTGCTGAGTGTGTCCATAAACACCTTCCCTG...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCCTCTCCAACGTCAGCTaGCCTGAAAGAAATGACTGG +
Preference number: 4 (lower is better)
Translates to: FKNADFSSEESGWLSNVSLSNVS*PERNDW
Trigger: CCAGTCATTTCTTTCAGGCCAGCTGACGTTGGAGAG...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATGGTCTTGTCTGGAAGTaGCACCGTCCCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: IFGEGRLVFWMKSGLSIHGLVWK*HRPLLG
Trigger: CCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACC...ATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAATGCAGCAGAACTGGCTaGAGCTTCTTCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPDLVAESPPEICGSCLECSRTG*SFFFPG
Trigger: TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCA...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTAGGCCCCCTGCATGCTaGTTGACTTGCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGRPPAC*LTCSRT
Trigger: AGTTCTGCTGCAAGTCAACCAGCATGCAGGGGGCCT...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCAGGCCCCCTGCATGCTaGTTGACTTGCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSRPPAC*LTCSRT
Trigger: AGTTCTGCTGCAAGTCAACCAGCATGCAGGGGGCCT...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCGGGTCAGATGGACCCTaGTTTATTAGAAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFGSDGP*FIRKRK
Trigger: TTTTCTTTTTCTAATAAACCAGGGTCCATCTGACCC...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGGAAACCAGGCCATCTaGCTACGGTTCCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWGNQAI*LRFPGS
Trigger: TGAACCAGGGAACCGTAGCCAGATGGCCTGGTTTCC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGATTAGCCAGGCGGGGTaGCACGCAACTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWISQAG*HATVIP
Trigger: TGGGATTACAGTTGCGTGCCACCCCGCCTGGCTAAT...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGTAGTCCCGGCTACTTaGGAAGCTGAAGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWVVPAT*EAEVGG
Trigger: TCCTCCCACTTCAGCTTCCCAAGTAGCCGGGACTAC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAACTTCCAGGTGAATGCTaGGTTCCTGTCCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: LPDLVAESPPEICGSCLELPGEC*VPVLIL
Trigger: CAAGATGAGGACAGGAACTCAGCATTCACCTGGAAG...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AGAGGCTGTGGCTGGCTCTCAAATGACGACAGCTGGCTTTCTCTGTGCAACAGTACTTGGCCGTGCGGATaGCATTGGTCTTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: RGCGWLSNDDSWLSLCNSTWPCG*HWSCIS
Trigger: AGAAATACAAGACCAATGTCATCCGCACGGCCAAGT...ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGAGAGCCAGCCACAGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAACACGTCACTGTGCCTTaGAAGGACGCCATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LPDLVAESPPEICGSCLEHVTVP*KDAIFF
Trigger: AAAGAAGATGGCGTCCTTTCAAGGCACAGTGACGTG...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAACACGTCACTGTGCCTTaGAAGGACGCCATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEHVTVP*KDAIFF
Trigger: AAAGAAGATGGCGTCCTTTCAAGGCACAGTGACGTG...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp AAGAATGTGACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTGTTTGCGCGTGCTGTTaGAGTCCATTATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KNVTSPWSTATSQEKVASVCACC*SPLWPG
Trigger: TCCTGGCCATAATGGACTTCAACAGCACGCGCAAAC...AGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AGAGGCTGTGGCTGGCTCTCAAATGACGACAGCTGGCTTTCTCTGTGCAACAGTGGTTGGTTTTCTGGATaGAGAGCGGATTGTCTATCC +
Preference number: 4 (lower is better)
Translates to: RGCGWLSNDDSWLSLCNSGWFSG*RADCLS
Trigger: GGATAGACAATCCGCTCTTCATCCAGAAAACCAACC...ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGAGAGCCAGCCACAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAACCTGATATGCCAGCGTaGCTCCTTTGGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKPDMPA*LLWARR
Trigger: TCTTCGAGCCCAAAGGAGTCACGCTGGCATATCAGG...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGCCCACGCACAGATCCTaGCATTTCTTCTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKPTHRS*HFFCLK
Trigger: CTTCAAGCAGAAGAAATGGCAGGATCTGTGCGTGGG...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAAGGACGATGTTGTCCTTaGGGAGACAGACCACATCCC +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKGRCCP*GDRPHP
Trigger: GGGATGTGGTCTGTCTCCGCAAGGACAACATCGTCC...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCTCGGAGGAGGAGGTTaGCAATGTCCAGGGAGTATT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWLGGGG*QCPGSI
Trigger: AATACTCCCTGGACATTGGCAACCTCCTCCTCCGAG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAATGTGGCAAATTCCATTaGCCCCCTCCTGTGCAAGCG +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKCGKFH*PPPVQA
Trigger: CGCTTGCACAGGAGGGGGGCAATGGAATTTGCCACA...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGAAACTGAGTGATGAGGTTTaGATATCCCTCACGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LCLGDNDLSCALGNCSWKLSDEV*ISLTVG
Trigger: TCCCACCGTGAGGGATATGCAAACCTCATCACTCAG...TTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAAGAGAGAATGCTCAAATaGCCAGAATCCACTCGAAGT +
Preference number: 4 (lower is better)
Translates to: GVRLLLPALPERCGGLQKERMLK*PESTRS
Trigger: ACTTCGAGTGGATTCTGGCCATTTGAGCATTCTCTC...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGCTGGTGGGGCCTTCTaGTCTCCATTCATACTTCCT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWAGGAF*SPFILP
Trigger: AGGAAGTATGAATGGAGACCAGAAGGCCCCACCAGC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp CATAATTTTTGTGTCAAAACCAGCATAAATGACCAGTCCATAGCAGGTGTCTGTCGGCCTCGTCCCCGTTaGTCCGCACGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HNFCVKTSINDQSIAGVCRPRPR*SARGAA
Trigger: TGCTGCACCTCGTGCGGACCAACGGGGACGAGGCCG...ACAGACACCTGCTATGGACTGGTCATTTATGCTGGTTTTGACACAAAAATTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp CATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATTTGTGGGTCTTGTCTaGAAGTGGCACCGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HIWGGQVGFLDEERIVYPFVGLV*KWHRPL
Trigger: GAGGGGACGGTGCCACTTCCAGACAAGACCCACAAA...TGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CAA 72 bp CTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTaGCTGCTGGTGAGCACATATTTGGGGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGNCSWKDSDSL*LLVSTYLGRAG
Trigger: ACCTGCCCTCCCCAAATATGTGCTCACCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CAA 72 bp TCTGTGTTGCGAATCCTGCAGCCTCGGAGGAGGAGGTaGCCAATGTCCAGGGAGTATTTCTTGTCATTCCAT +
Preference number: 4 (lower is better)
Translates to: SVLRILQPRRRR*PMSREYFLSFH
Trigger: ATGGAATGACAAGAAATACTCCCTGGACATTGGCAACCTCCTCCTCCGAGGCTGCAGGATTCGCAACACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCTTCCAGGTGAATGCTaGGTTCCTGTCCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWLPGEC*VPVLIL
Trigger: CAAGATGAGGACAGGAACTCAGCATTCACCTGGAAG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCACGTCACTGTGCCTTaGAAGGACGCCATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWHVTVP*KDAIFF
Trigger: AAAGAAGATGGCGTCCTTTCAAGGCACAGTGACGTG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAAGTTTGCGCGTGCTGTTaGAGTCCATTATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKVCACC*SPLWPG
Trigger: TCCTGGCCATAATGGACTTCAACAGCACGCGCAAAC...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCAATGAGCATATTCTCTaGCAGCAGCTCGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSNEHIL*QQLAGE
Trigger: TTCGCCTGCGAGCTGCTGTCAGAGAATATGCTCATT...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR TCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAAGGAAGGACATCTTCCTaGTATGCCAGCGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKGRTSS*YASVTP
Trigger: AGGAGTCACGCTGGCATATCAGGAAGATGTCCTTCC...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGTCCTGCCATTTCTTCTaGTTGAAGCTCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKSCHFF*LKLFPI
Trigger: GATGGGGAAGAGCTTCAAGCAGAAGAAATGGCAGGA...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CCA 90 bp CATAATTTTTGTGTCAAAACCAGCATAAATGACCAGTCCATAGCAGGTGTCTGTGTCCGCAGGGTCTCCTaGGCAAAGGCAGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HNFCVKTSINDQSIAGVCVRRVS*AKAAKA
Trigger: GGCCTTGGCTGCCTTTGCCCAGGAGACCCTGCGGAC...ACAGACACCTGCTATGGACTGGTCATTTATGCTGGTTTTGACACAAAAATTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTAAGAGCCAGAAGCTCTaGGTGGTGGTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGKSQKL*VVVVMM
Trigger: CATCATGACTACCACCACCCAGAGCTTCTGGCTCTT...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTCTCTCCAACGTCAGCTaGCCTGAAAGAAATGACTGG +
Preference number: 4 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSLSNVS*PERNDW
Trigger: CCAGTCATTTCTTTCAGGCCAGCTGACGTTGGAGAG...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp ACGGATGAAGAGGAGGCAGACCATAGGGGTACTGAGCGAGAACCAGGGCAGCGTGGGTCAGATGGACCCTaGTTTATTAGAAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TDEEEADHRGTEREPGQRGSDGP*FIRKRK
Trigger: TTTTCTTTTTCTAATAAACCAGGGTCCATCTGACCC...ACGCTGCCCTGGTTCTCGCTCAGTACCCCTATGGTCTGCCTCCTCTTCATCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
3UTR CAA 72 bp GTTGCTGCTGGTGAGCACATATTTGGGGAGGGCAGGTaGGTTTTCTGGATGAAGAGCGGATTGTCTATCCAT +
Preference number: 4 (lower is better)
Translates to: VAAGEHIFGEGR*VFWMKSGLSIH
Trigger: ATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATGTGCTCACCAGCAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
3UTR CAA 72 bp TCCCCGGTGAGCACCCATATTTTGATGTTGCTCTTCTaGAGACATTTGATGGTTTCAGGGACACCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPVSTHILMLLF*RHLMVSGTPSW
Trigger: CCAGGACGGTGTCCCTGAAACCATCAAATGTCTCAAGAAGAGCAACATCAAAATATGGGTGCTCACCGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp AAGAATGTGACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTACTTGGCCGTGCGGATaGCATTGGTCTTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: KNVTSPWSTATSQEKVASTWPCG*HWSCIS
Trigger: AGAAATACAAGACCAATGTCATCCGCACGGCCAAGT...AGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGACTTGGCCGTGCGGATaGCATTGGTCTTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWTWPCG*HWSCIS
Trigger: AGAAATACAAGACCAATGTCATCCGCACGGCCAAGT...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAAAATGAGCATATTCTCTaGCAGCAGCTCGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKNEHIL*QQLAGE
Trigger: TTCGCCTGCGAGCTGCTGTCAGAGAATATGCTCATT...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTAACAGTGATTTCTCCTaGAAAGAATGTGACCTCTCC +
Preference number: 4 (lower is better)
Translates to: APFASSSGTVWRASKMLTNSDFS*KECDLS
Trigger: GGAGAGGTCACATTCTTTTCAGGAGAAATCACTGTT...AGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp ATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATGGGCTTCAAAAATGCTaGCTTCTCCTCCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: IFGEGRLVFWMKSGLSIHGLQKC*LLLRGV
Trigger: GACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCC...ATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTCCTGCCATTTCTTCTaGTTGAAGCTCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWSCHFF*LKLFPI
Trigger: GATGGGGAAGAGCTTCAAGCAGAAGAAATGGCAGGA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp CATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCACTGAGTGATGAGGTTTaGATATCCCTCACGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HIWGGQVGFLDEERIVYPLSDEV*ISLTVG
Trigger: TCCCACCGTGAGGGATATGCAAACCTCATCACTCAG...TGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTTCCCCATCAGAATCTaGCAGGGTCTGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWFPIRI*QGLLLM
Trigger: CATCAACAACAGACCCTGCCAGATTCTGATGGGGAA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTTGGTGCTGCGGGCCTTaGCAGGCACGTCCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESWCCGP*QARPAA
Trigger: AGCCGCAGGACGTGCCTGCCAAGGCCCGCAGCACCA...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp CTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGAAATCAAATGACGACAGCTaGCTTTCTCTGTGCAACAGT +
Preference number: 4 (lower is better)
Translates to: LCLGDNDLSCALGNCSWKSNDDS*LSLCNS
Trigger: ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGA...TTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp ATCAGAATCTGGCAGGGTCTGTTGTTGATGGCTCTGTCACTCTTGTGTCTCCCCTCAAATGACGACAGCTaGCTTTCTCTGTGCAACAGT +
Preference number: 4 (lower is better)
Translates to: IRIWQGLLLMALSLLCLPSNDDS*LSLCNS
Trigger: ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGA...GGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp ATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATTGCTGTACAGGAGGTTaGAAAGAGCCAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: IFGEGRLVFWMKSGLSIHCCTGG*KEPGTI
Trigger: GATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCA...ATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAGGTTGGTTTTCTGGATaGAGAGCGGATTGTCTATCC +
Preference number: 4 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRGWFSG*RADCLS
Trigger: GGATAGACAATCCGCTCTTCATCCAGAAAACCAACC...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAACTCCTGAAAAGAATGTaGCCTCTCCTTGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKLLKRM*PLLGQQ
Trigger: CTGTTGACCAAGGAGAGGTCACATTCTTTTCAGGAG...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR GCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCTCTCTGGCCGAGGCTaGCCATGCTGGTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESLSGRG*PCWWGL
Trigger: AAGGCCCCACCAGCATGGGCAGCCTCGGCCAGAGAG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTACTCTGCGGCCACGCTaGTCCCATGCACCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESTLRPR*SHAPPR
Trigger: TCTCGGGGGTGCATGGGAGCAGCGTGGCCGCAGAGT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp ATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATGACATCTTCCTGATATaGCAGCGTGACTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: IFGEGRLVFWMKSGLSIHDIFLI*QRDSFG
Trigger: CCCAAAGGAGTCACGCTGGCATATCAGGAAGATGTC...ATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTAGGTGCCCCTCTGCCTaGGGAGTCTCCCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESRCPSA*GVSHPS
Trigger: GCTGGGATGGGAGACTCCCCAGGCAGAGGGGCACCT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCGAGGCTGCCCATGCTaGTGGGGCCTTCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESRGCPC*WGLLVS
Trigger: GGAGACCAGAAGGCCCCACCAGCATGGGCAGCCTCG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTCAGGAGGTCCAGCTTaGTTCTCTTCAAATGGATCT +
Preference number: 4 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGSGGPA*FSSNGS
Trigger: AGATCCATTTGAAGAGAACCAAGCTGGACCTCCTGA...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCTCCCATCCCAGCTCTaGTCACCGTCTCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESLPSQL*SPSHLR
Trigger: GCGGAGGTGAGACGGTGATCAGAGCTGGGATGGGAG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGGCTGCTGGGCTCCGTaGTGGCCAGCAAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESGCWAP*WPARAC
Trigger: ACATGCTCTTGCTGGCCAGCACGGAGCCCAGCAGCC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp CATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATGTGCCCTTGGCAATTaGTCTTGGAAAGACTCAGAT +
Preference number: 4 (lower is better)
Translates to: HIWGGQVGFLDEERIVYPCALGN*SWKDSD
Trigger: ATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACA...TGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAGAGAGAATGCTCAAATaGCCAGAATCCACTCGAAGT +
Preference number: 4 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRERMLK*PESTRS
Trigger: ACTTCGAGTGGATTCTGGCCATTTGAGCATTCTCTC...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTTGCTGGGCTCCGTGCTaGCCAGCAAGAGCATGTCGG +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESCWAPC*PARACR
Trigger: CCGACATGCTCTTGCTGGCCAGCACGGAGCCCAGCA...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCATAGCACAGGCTGCTaGGCTCCGTGCTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESHSTGC*APCWPA
Trigger: TGCTGGCCAGCACGGAGCCCAGCAGCCTGTGCTATG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAATCAGGAGGTCCAGCTTaGTTCTCTTCAAATGGATCT +
Preference number: 4 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKSGGPA*FSSNGS
Trigger: AGATCCATTTGAAGAGAACCAAGCTGGACCTCCTGA...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGGCCAGACGTGGCTCTaGTTCTCAGGCACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESGQTWL*FSGTLS
Trigger: GCTCAGGGTGCCTGAGAACCAGAGCCACGTCTGGCC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGGACCTGAGCCTTCCTaGGTCACGTCTGAGTCACCC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESGPEPS*VTSESP
Trigger: GGGTGACTCAGACGTGACTCAGGAAGGCTCAGGTCC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGATGCCAGCAGGACCTaGGCCTTCCTGAGTCACGTC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESDASRT*AFLSHV
Trigger: GACGTGACTCAGGAAGGCTCAGGTCCTGCTGGCATC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCACCCCACGAAGTGGTaGATCCGACTGTTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESHPTKW*IRLLGA
Trigger: GGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp CATAATTTTTGTGTCAAAACCAGCATAAATGACCAGTCCATAGCAGGTGTCTGTAGTAGCGCAGGAACTTaGAGATCCGCACGTAGGACC +
Preference number: 4 (lower is better)
Translates to: HNFCVKTSINDQSIAGVCSSAGT*RSARRT
Trigger: GGTCCTACGTGCGGATCTGCAAGTTCCTGCGCTACT...ACAGACACCTGCTATGGACTGGTCATTTATGCTGGTTTTGACACAAAAATTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGGCTGCCCATGCTGGTaGGGCCTTCTGGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESGCPCW*GLLVSI
Trigger: AATGGAGACCAGAAGGCCCCACCAGCATGGGCAGCC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp CATAATTTTTGTGTCAAAACCAGCATAAATGACCAGTCCATAGCAGGTGTCTGTAGGTTGGACACGCGGTaGAACTGCTCGTACAGGTTC +
Preference number: 4 (lower is better)
Translates to: HNFCVKTSINDQSIAGVCRLDTR*NCSYRF
Trigger: GAACCTGTACGAGCAGTTCCACCGCGTGTCCAACCT...ACAGACACCTGCTATGGACTGGTCATTTATGCTGGTTTTGACACAAAAATTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp ATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAACAGTGATTTCTCCTaGAAAGAATGTGACCTCTCC +
Preference number: 4 (lower is better)
Translates to: IFGEGRLVFWMKSGLSIHNSDFS*KECDLS
Trigger: GGAGAGGTCACATTCTTTTCAGGAGAAATCACTGTT...ATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR TCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGGCAGGCAGATCACCTaGAGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESGRQIT*SQEFET
Trigger: GGTCTCGAACTCCTGACTTCAGGTGATCTGCCTGCC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGACAAATAAAGGCTTGTaGAAGTCAAAAGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PQIKACESQKKSSGRVWWTNKGL*KSKEEQ
Trigger: CTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGT...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTTGGAGATCTTCTCTCTaGCCGAGGCTGCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESWRSSL*PRLPML
Trigger: CAGCATGGGCAGCCTCGGCCAGAGAGAAGATCTCCA...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTAGGCACCCCACGAAGTaGTGCATCCGACTGTTAGGC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESRHPTK*CIRLLG
Trigger: GCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp ATGGATCTTGCCACAGTTCTTCATAATTTTTGTGTCAAAACCAGCATAAATGACCGAAGACCCAGTAGTTaGAGAGCTCGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: MDLATVLHNFCVKTSINDRRPSS*RARPSA
Trigger: GGCAGAAGGACGAGCTCTTCAACTACTGGGTCTTCG...GTCATTTATGCTGGTTTTGACACAAAAATTATGAAGAACTGTGGCAAGATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTAGGTTGGACACGCGGTaGAACTGCTCGTACAGGTTC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESRLDTR*NCSYRF
Trigger: GAACCTGTACGAGCAGTTCCACCGCGTGTCCAACCT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGTGGCCAGTTCTTTGTaGGTGACCATCAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESVASSL*VTIRAC
Trigger: ACAGGCCCTGATGGTCACCCACAAAGAACTGGCCAC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGGCAGGGTCTGTTGTTaGTGGCTCTGTCACTCTTGT +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESGRVCC*WLCHSC
Trigger: ACAAGAGTGACAGAGCCATCAACAACAGACCCTGCC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCCAAGATTGCACCACTaGATTCCTGCCTGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESPRLHH*IPAWVD
Trigger: GTCTACCCAGGCAGGAATGCAGTGGTGCAATCTTGG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTAAGATGTATTCCACCTaGCCCAGGTGGTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESKMYST*PRWSLR
Trigger: CCTCAACGACCACCTGGGCCAGGTGGAATACATCTT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCACTGCATTCCTGCCTaGGTAGACAGAGTGAGACTC +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESHCIPA*VDRVRL
Trigger: GAGTCTCACTCTGTCTACCCAGGCAGGAATGCAGTG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCCCACGCACAGATCCTaGCATTTCTTCTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESPTHRS*HFFCLK
Trigger: CTTCAAGCAGAAGAAATGGCAGGATCTGTGCGTGGG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR TCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGGCTGCAATAAGCTATaGTTGCACCACTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESGCNKL*LHHCIP
Trigger: TGGAATGCAGTGGTGCAATCATAGCTTATTGCAGCC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR GCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTATGTCGGGAATGCTCTaGAGGATGATGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESMSGML*RMMMMR
Trigger: CCTCATCATCATCATCCTGCAGAGCATTCCCGACAT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
3UTR CAA 72 bp ATCAGGAGGTCCAGCTTGGTTCTCTTCAAATGGATCTaGCCACAGTTCTTCATAATTTTTGTGTCAAAACCA +
Preference number: 4 (lower is better)
Translates to: IRRSSLVLFKWI*PQFFIIFVSKP
Trigger: TGGTTTTGACACAAAAATTATGAAGAACTGTGGCAAGATCCATTTGAAGAGAACCAAGCTGGACCTCCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR TCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCAAAACCAGCATAAATaGCCAGTCCATAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESQNQHK*PVHSRC
Trigger: ACACCTGCTATGGACTGGTCATTTATGCTGGTTTTG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CCA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTTCAGGAGGTCCAGCTTaGTTCTCTTCAAATGGATCT +
Preference number: 4 (lower is better)
Translates to: RNTQQFEFQHPQIKACESSGGPA*FSSNGS
Trigger: AGATCCATTTGAAGAGAACCAAGCTGGACCTCCTGA...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS GCA 90 bp CTGGACTGGCCGAGCTCCTGCCACGCCTCGTCCATGTTCACGTTCTaGGCCAGGGCGCGCGGCTCCTTCCGCAGGGACACCAGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: LDWPSSCHASSMFTF*ARARGSFRRDTSSL
Trigger: CAAACTGCTGGTGTCCCTGCGGAAGGAGCCGCGCGCCCTGGCGCAGAACGTGAACATGGACGAGGCGTGGCAGGAGCTCGGCCAGTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526847.1
CDS-3UTR CAA 90 bp GGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCTGGCCCAGGTGGTCGTaGAGGCTGGTGCTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: GHSSTSIGCSLVDVDDSSWPRWS*RLVLRA
Trigger: GGCCCGCAGCACCAGCCTCAACGACCACCTGGGCCA...GGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS GCA 90 bp CCAGGCCATCTGGCTACGGTTCCCTGGTTCAGATTCGGGCGGAGGTaGTGGGCATGGGGCCAGACGTGGCTCTGGTTCTCAGGCACCCTG +
Preference number: 5 (lower is better)
Translates to: PGHLATVPWFRFGRR*WAWGQTWLWFSGTL
Trigger: CAGGGTGCCTGAGAACCAGAGCCACGTCTGGCCCCATGCCCAGCACCTCCGCCCGAATCTGAACCAGGGAACCGTAGCCAGATGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS CCA 90 bp CCAGCAGCTGTTGCAGGGCCTGTGCCCGGTTCTGCAGCAGGAGGCTaGCCTCCTGGTGGCGCTGCTGCCAGTCCTCGTAAATGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: PAAVAGPVPGSAAGG*PPGGAAASPRKCPQ
Trigger: CTGAGGACATTTACGAGGACTGGCAGCAGCGCCACCAGGAGGCCAGCCTCCTGCTGCAGAACCGGGCACAGGCCCTGCAACAGCTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS CCA 90 bp CTGGTTCTCAGGCACCCTGAGCCCCTTGAAGATCGAGGACCCAGCTaGGAGCTCAGGTGTCGGGGCCGCACCATAGACGCGGCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: LVLRHPEPLEDRGPS*ELRCRGRTIDAAAD
Trigger: ATCAGCGGCCGCGTCTATGGTGCGGCCCCGACACCTGAGCTCCCAGCTGGGTCCTCGATCTTCAAGGGGCTCAGGGTGCCTGAGAACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS CCA 90 bp GGCCATCTGGCTACGGTTCCCTGGTTCAGATTCGGGCGGAGGTGCTaGGCATGGGGCCAGACGTGGCTCTGGTTCTCAGGCACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: GHLATVPWFRFGRRC*AWGQTWLWFSGTLS
Trigger: GCTCAGGGTGCCTGAGAACCAGAGCCACGTCTGGCCCCATGCCCAGCACCTCCGCCCGAATCTGAACCAGGGAACCGTAGCCAGATGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS CCA 90 bp CCTGGCCCCCTCCAAAGGAAACCAGGCCATCTGGCTACGGTTCCCTaGTTCAGATTCGGGCGGAGGTGCTGGGCATGGGGCCAGACGTGG +
Preference number: 5 (lower is better)
Translates to: PGPLQRKPGHLATVP*FRFGRRCWAWGQTW
Trigger: CCACGTCTGGCCCCATGCCCAGCACCTCCGCCCGAATCTGAACCAGGGAACCGTAGCCAGATGGCCTGGTTTCCTTTGGAGGGGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS-3UTR CAA 90 bp CAGGAGAAGGTGGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCACTGGTGCTGCGGGCCTaGGCAGGCACGTCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: QEKVASAWVTMTSPVPLALVLRA*AGTSCG
Trigger: GCCGCAGGACGTGCCTGCCAAGGCCCGCAGCACCAG...TGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CGCGGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTGCAGCAGGGCCGCATaGTGGAAGAGCAGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: RGPQLHLHRLLARGRGRFCSRAA*WKSSFP
Trigger: CGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCA...GAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS TCA 90 bp TCCTCTCAGGTGCCCCTCTGCCTGGGGAGTCTCCCATCCCAGCTCTaGTCACCGTCTCACCTCCGCGGATGCCAGCAGGACCTGAGCCTT +
Preference number: 5 (lower is better)
Translates to: SSQVPLCLGSLPSQL*SPSHLRGCQQDLSL
Trigger: AAGGCTCAGGTCCTGCTGGCATCCGCGGAGGTGAGACGGTGATCAGAGCTGGGATGGGAGACTCCCCAGGCAGAGGGGCACCTGAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000587160.2
CDS CCA 90 bp TCCGGCACAGCAGGGACAGGCGCCTGGCGTAGAGGAAATCCCTCCTaGACTGGCCGAGCTCCTGCCACGCCTCGTCCATGTTCACGTTCT +
Preference number: 5 (lower is better)
Translates to: SGTAGTGAWRRGNPS*TGRAPATPRPCSRS
Trigger: AGAACGTGAACATGGACGAGGCGTGGCAGGAGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTGTGCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526847.1
CDS CCA 90 bp CCCTGGTTCAGATTCGGGCGGAGGTGCTGGGCATGGGGCCAGACGTaGCTCTGGTTCTCAGGCACCCTGAGCCCCTTGAAGATCGAGGAC +
Preference number: 5 (lower is better)
Translates to: PWFRFGRRCWAWGQT*LWFSGTLSPLKIED
Trigger: GTCCTCGATCTTCAAGGGGCTCAGGGTGCCTGAGAACCAGAGCCACGTCTGGCCCCATGCCCAGCACCTCCGCCCGAATCTGAACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS GCA 90 bp TCTGGTCTCCATTCATACTTCCTAGCCCGGCCAGGCTGGGCCTTGTaGCTCCTCTCAGGTGCCCCTCTGCCTGGGGAGTCTCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: SGLHSYFLARPGWAL*LLSGAPLPGESPIP
Trigger: TGGGATGGGAGACTCCCCAGGCAGAGGGGCACCTGAGAGGAGGCACAAGGCCCAGCCTGGCCGGGCTAGGAAGTATGAATGGAGACCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000533993.5
ENST00000587160.2
CDS-3UTR CAA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAAACGGCCTCGTCCCCGTaGGTCCGCACGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GVRLLLPALPERCGGLQKTASSP*VRTRCS
Trigger: GCTGCACCTCGTGCGGACCAACGGGGACGAGGCCGT...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCACAGCCGTTTCCTGCTaGTCCCCGGTGAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFTAVSC*SPVSTH
Trigger: ATGGGTGCTCACCGGGGACAAGCAGGAAACGGCTGT...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGATGACCAAGGCCAGCTaGACCTGCGACAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSAMTKAS*TCDRDS
Trigger: GGAGTCCCTGTCGCAGGTCAAGCTGGCCTTGGTCAT...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp ACAGCAGGGACAGGCGCCTGGCGTAGAGGAAATCCCTCCTGGACTGGCCGAGCTACCTGGTGGTACTTCTaGACCAGGGCCACGATCAGG +
Preference number: 5 (lower is better)
Translates to: TAGTGAWRRGNPSWTGRATWWYF*TRATIR
Trigger: CCTGATCGTGGCCCTGGTCAAGAAGTACCACCAGGT...AGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCAGGCGCCTGTCCCTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526847.1
CDS-3UTR CAA 90 bp GCTCTGCAAGGGTTCGCCATCAGGGCCTCGGCCTCTGTCCTCGTCCCGGCCAAATTGGCACGTAGCTCCTaGAGGGCTGGGAAGATGACT +
Preference number: 5 (lower is better)
Translates to: ALQGFAIRASASVLVPAKLARSS*RAGKMT
Trigger: AGTCATCTTCCCAGCCCTCAAGGAGCTACGTGCCAA...TTTGGCCGGGACGAGGACAGAGGCCGAGGCCCTGATGGCGAACCCTTGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCGCCAGCGTGACTCCTTaGGGCTCGAAGATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPASVTP*GSKMPL
Trigger: AAGAGGCATCTTCGAGCCCAAAGGAGTCACGCTGGC...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS CCA 90 bp CAGGTGAATGCTGAGTTCCTGTCCTCATCTTGGAGATCTTCTCTCTaGCCGAGGCTGCCCATGCTGGTGGGGCTCCGCGGATGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: QVNAEFLSSSWRSSL*PRLPMLVGLRGCQQ
Trigger: CTGCTGGCATCCGCGGAGCCCCACCAGCATGGGCAGCCTCGGCCAGAGAGAAGATCTCCAAGATGAGGACAGGAACTCAGCATTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CCTCCGCAGAGGGCAATGACTGCTCCTCTGGGGGCAAGGATAGCTGCTCCTCCCATGGCTCTGTCACTCTaGTGTCTCCCCATGTCGTCC +
Preference number: 5 (lower is better)
Translates to: PPQRAMTAPLGARIAAPPMALSL*CLPMSS
Trigger: GGACGACATGGGGAGACACAAGAGTGACAGAGCCAT...GGGAGGAGCAGCTATCCTTGCCCCCAGAGGAGCAGTCATTGCCCTCTGCGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCGGGACGATGTTGTCCTaGCGGAGACAGACCACATCC +
Preference number: 5 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFGTMLS*RRQTTS
Trigger: GGATGTGGTCTGTCTCCGCAAGGACAACATCGTCCC...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CGCCTGGTACAACAGCTGGTCTGGGCGCTCACGGGGGCTCTCCCGCACCATCACACACGTCACTGTGCCTaGAAAGGACGCCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: RLVQQLVWALTGALPHHHTRHCA*KGRHLL
Trigger: AAGAAGATGGCGTCCTTTCAAGGCACAGTGACGTGT...GTGATGGTGCGGGAGAGCCCCCGTGAGCGCCCAGACCAGCTGTTGTACCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp TGTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTCCTCGGAGGAGGAGGTaGCCAATGTCCAGGGAGTAT +
Preference number: 5 (lower is better)
Translates to: CGSCLEVAPSPPWGCEAPPRRRR*PMSREY
Trigger: ATACTCCCTGGACATTGGCAACCTCCTCCTCCGAGG...AGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp TCCTCCCCGGGCACCAGCAGCCACTCCATGGATGATGATGACTGCTTCTCCGCGCCTCGGAGGAGGAGGTaGCCAATGTCCAGGGAGTAT +
Preference number: 5 (lower is better)
Translates to: SSPGTSSHSMDDDDCFSAPRRRR*PMSREY
Trigger: ATACTCCCTGGACATTGGCAACCTCCTCCTCCGAGG...CGCGGAGAAGCAGTCATCATCATCCATGGAGTGGCTGCTGGTGCCCGGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGAAACTGGTGCTGCGGGCCTaGGCAGGCACGTCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: LCLGDNDLSCALGNCSWKLVLRA*AGTSCG
Trigger: GCCGCAGGACGTGCCTGCCAAGGCCCGCAGCACCAG...TTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCTGTGCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGTGGCCCAGGTGGTCGTaGAGGCTGGTGCTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PVPLAIALGKTQIACCCWWPRWS*RLVLRA
Trigger: GGCCCGCAGCACCAGCCTCAACGACCACCTGGGCCA...CCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp ACGGATGAAGAGGAGGCAGACCATAGGGGTACTGAGCGAGAACCAGGGCAGCGTATGACCGCCTGGCACTaGGACGCCAGGTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: TDEEEADHRGTEREPGQRMTAWH*DARSTK
Trigger: CTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT...ACGCTGCCCTGGTTCTCGCTCAGTACCCCTATGGTCTGCCTCCTCTTCATCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp AGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTCCTGGCCCCCCTGCATGCTGGTaGACTTGCAGCAGAACTGGC +
Preference number: 5 (lower is better)
Translates to: RTGRARSRCSELPACPPGPPACW*TCSRTG
Trigger: GCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGGG...GCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CTTGTGTCTCCCCATGTCGTCCACCAGGTCCCGGGTGGCACGGATGAAGAGGAGCTCTTCAGACTTTCCTaGTCCTCCCCATCGCCCGAG +
Preference number: 5 (lower is better)
Translates to: LVSPHVVHQVPGGTDEEELFRLS*SSPSPE
Trigger: CTCGGGCGATGGGGAGGACAAGGAAAGTCTGAAGAG...CTCCTCTTCATCCGTGCCACCCGGGACCTGGTGGACGACATGGGGAGACACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp ACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCTTCCCGTCGGCGAACTTGATAGTGGCCAGTTCTTaGTGGGTGACCATCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TRCSRAALWKSSFPSANLIVASS*WVTIRA
Trigger: GGCCCTGATGGTCACCCACAAAGAACTGGCCACTAT...CAAGTTCGCCGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CTGGTGGTCGCTGAAGCTGGCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCTGATGCAGCACTTGTaGAAGGTCAAGATGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LVVAEAGGSRRVAADPQCLMQHL*KVKMFC
Trigger: GCAGAACATCTTGACCTTCAACAAGTGCTGCATCAG...ACACTGTGGATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAAACCGTGTCGGCGCCCTaGGTGTACAGGCAGATGGCG +
Preference number: 5 (lower is better)
Translates to: GVRLLLPALPERCGGLQKTVSAP*VYRQMA
Trigger: CGCCATCTGCCTGTACACCAAGGGCGCCGACACGGT...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTACAGCCGTTTCCTGCTaGTCCCCGGTGAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTTAVSC*SPVSTH
Trigger: ATGGGTGCTCACCGGGGACAAGCAGGAAACGGCTGT...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CAGGAGAAGGTGGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCACCCCCTGCATGCTGGTaGACTTGCAGCAGAACTGGC +
Preference number: 5 (lower is better)
Translates to: QEKVASAWVTMTSPVPLAPPACW*TCSRTG
Trigger: GCCAGTTCTGCTGCAAGTCAACCAGCATGCAGGGGG...TGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTCTCGTTGTACACCTGTaGCAGGGCCTGTGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTLVVHL*QGLCPV
Trigger: AACCGGGCACAGGCCCTGCAACAGGTGTACAACGAG...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS CCA 90 bp CGTGGGGGCAGACTGGGGATTGGAGAGTTGGAGAGAATGCTCAAATaGCCAGAATCCACTCGAAGTGTATCGGCGCAGGAGAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: RGGRLGIGELERMLK*PESTRSVSAQERQG
Trigger: CCCCTGCCTCTCCTGCGCCGATACACTTCGAGTGGATTCTGGCCATTTGAGCATTCTCTCCAACTCTCCAATCCCCAGTCTGCCCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp ATGACCGCCTGGCACTTGGACGCCAGGTCCACGAAGGCGCGCTCCTGCAGCACCCGGATGACATTGGTCTaGTATTTCTTCCTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: MTAWHLDARSTKARSCSTRMTLV*YFFLCQ
Trigger: CTGGCAAAGGAAGAAATACAAGACCAATGTCATCCG...GGTGCTGCAGGAGCGCGCCTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTGGCCCAGGTGGTCGTaGAGGCTGGTGCTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWWPRWS*RLVLRA
Trigger: GGCCCGCAGCACCAGCCTCAACGACCACCTGGGCCA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGAATGACCGCCTGGCACTaGGACGCCAGGTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGMTAWH*DARSTK
Trigger: CTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGACCATGGGCGATGGCTaGGACGAAGACCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: GGAAGSRTGRARSRCSELTMGDG*DEDPVV
Trigger: AACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGT...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CAA 90 bp CTGAGCGAGAACCAGGGCAGCGTGGAGATGTCGGGAATGCTCTGCAGGATGATGGAAGGTGGCCTCTGCTaGGGTGACAATGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: LSENQGSVEMSGMLCRMMEGGLC*GDNDLS
Trigger: GGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTC...CATCATCCTGCAGAGCATTCCCGACATCTCCACGCTGCCCTGGTTCTCGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCGGTGTGAGGCTCCTTTaGCCAGCTCTTCCGGAACGG +
Preference number: 5 (lower is better)
Translates to: GVEGFKNADFSSEESGWLGVRLL*PALPER
Trigger: CCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AGCAGGGACAGGCGCCAGGAAGTCTCCGTTAATGACCAAGGCCAGCTTGACCTGTCCTGCTCCATCTCGTaGTACACCTGTTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SRDRRQEVSVNDQGQLDLSCSIS*YTCCRA
Trigger: GGCCCTGCAACAGGTGTACAACGAGATGGAGCAGGA...CAGGTCAAGCTGGCCTTGGTCATTAACGGAGACTTCCTGGCGCCTGTCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTTGCCATTTCTTCTGCTaGAAGCTGCGGGGAGAGGGG +
Preference number: 5 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTCHFFC*KLRGEG
Trigger: CCCCTCTCCCCGCAGCTTCAAGCAGAAGAAATGGCA...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp ACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCTTCCCGTCGGCGAACTTGTGTCTGAACTTCAAGTaGGTCTCCCCGTCAATGTCC +
Preference number: 5 (lower is better)
Translates to: TRCSRAALWKSSFPSANLCLNFK*VSPSMS
Trigger: GGACATTGACGGGGAGACCAACTTGAAGTTCAGACA...CAAGTTCGCCGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CAGGAGAAGGTGGCCTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATAGTGGCCAGTTCTTaGTGGGTGACCATCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QEKVASAWVTMTSPVPLAIVASS*WVTIRA
Trigger: GGCCCTGATGGTCACCCACAAAGAACTGGCCACTAT...TGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCAACGGCCTCGTCCCCGTaGGTCCGCACGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: HIWGGQVGFLDEERIVYPTASSP*VRTRCS
Trigger: GCTGCACCTCGTGCGGACCAACGGGGACGAGGCCGT...TGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCGTGCTGTACAGGAGGTaGAAAAGAGCCAGGAACCAT +
Preference number: 5 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFVLYRR*KRARNH
Trigger: ATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCAC...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCAGGGCGGTCCAGTACTaGATGATAAGAATGACCTCC +
Preference number: 5 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFRAVQY*MIRMTS
Trigger: GGAGGTCATTCTTATCATCAAGTACTGGACCGCCCT...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GCGGGTCCCGCCGTGTCGCGGCTGATCCACAGTGTCATGAAGAAGTTGACCAGAACGATTCTTCCAGACTaGGTGGCAGAGTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: AGPAVSRLIHSVMKKLTRTILPD*VAESPP
Trigger: AGGTGGAGACTCTGCCACCAAGTCTGGAAGAATCGT...TCTGGTCAACTTCTTCATGACACTGTGGATCAGCCGCGACACGGCGGGACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CCATTCCAGGCACCCCACGAAGTGGTGCATCCGACTGTTAGGCGCCTCACACGTAAGCATGTGGAGTCCTaGTCTTTAGAGGAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: PFQAPHEVVHPTVRRLTRKHVES*SLEEGP
Trigger: GGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTT...ACGTGTGAGGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp AAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCTGGCATGGCTCTGTCACTCTaGTGTCTCCCCATGTCGTCC +
Preference number: 5 (lower is better)
Translates to: KMLTSPPRSLAGSPTSAGMALSL*CLPMSS
Trigger: GGACGACATGGGGAGACACAAGAGTGACAGAGCCAT...GCCAGCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGGCCACAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCTGCCATTTCTTCTGCTaGAAGCTCTTCCCCATCAGA +
Preference number: 5 (lower is better)
Translates to: GPQLHLHRLLARGRGRFFCHFFC*KLFPIR
Trigger: TCTGATGGGGAAGAGCTTCAAGCAGAAGAAATGGCA...GAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CAA 90 bp GCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCGGCTGGGACGATGTaGTCCTTGCGGAGACAGACC +
Preference number: 5 (lower is better)
Translates to: APFASSSGTVWRASKMLTSAGTM*SLRRQT
Trigger: GGTCTGTCTCCGCAAGGACAACATCGTCCCAGCCGA...AGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTATCAGGAGGTCCAGCTaGGTTCTCTTCAAATGGATC +
Preference number: 5 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLIRRSS*VLFKWI
Trigger: GATCCATTTGAAGAGAACCAAGCTGGACCTCCTGAT...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp TCCCCGTTGGTCCGCACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCTTCTGGTCTTTGAATTCTTaGACTGAGAAACCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: SPLVRTRCSRAALWKSSFWSLNS*TEKPKP
Trigger: CGGCTTCGGTTTCTCAGTCAAAGAATTCAAAGACCA...GAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGTGCAGCAGGGCCGCATaGTGGAAGAGCAGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKCSRAA*WKSSFP
Trigger: CGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCA...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTAGGGACACCAGCAGTTaGTCCAGGAAGTCTCCGTTA +
Preference number: 5 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSRDTSS*SRKSPL
Trigger: TAACGGAGACTTCCTGGACAAACTGCTGGTGTCCCT...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310127.10
CDS-3UTR CAA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAATGACCGCCTGGCACTaGGACGCCAGGTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEMTAWH*DARSTK
Trigger: CTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCAT...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CAA 90 bp AAGATGACTCGGAGGGCCAGGACAGGGAAGGTGTTTATGGACACACTCAGCAGGACCTGGTGGTACTTCTaGACCAGGGCCACGATCAGG +
Preference number: 5 (lower is better)
Translates to: KMTRRARTGKVFMDTLSRTWWYF*TRATIR
Trigger: CCTGATCGTGGCCCTGGTCAAGAAGTACCACCAGGT...CCTGCTGAGTGTGTCCATAAACACCTTCCCTGTCCTGGCCCTCCGAGTCATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp ACGAGGTGCAGCAGGGCCGCATTGTGGAAGAGCAGCTTCCCGTCGGCGAACTTGAGTGTCATGAAGAAGTaGACCAGAGAGGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: TRCSRAALWKSSFPSANLSVMKK*TREVVT
Trigger: TGTGACCACCTCTCTGGTCAACTTCTTCATGACACT...CAAGTTCGCCGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTTGGCACGTAGCTCCTaGAGGGCTGGGAAGATGACT +
Preference number: 5 (lower is better)
Translates to: GVEGFKNADFSSEESGWLLARSS*RAGKMT
Trigger: AGTCATCTTCCCAGCCCTCAAGGAGCTACGTGCCAA...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGATCCACCTTCTCCTCCTaGGCACGTAGCTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGSTFSS*ARSSLR
Trigger: CCTCAAGGAGCTACGTGCCAAGGAGGAGAAGGTGGA...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTGTCACTGTGACTCTTTaGGGCTCGAAGCTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: GSRTGRARSRCSELPACPVTVTL*GSKLPL
Trigger: AAGAGGCAGCTTCGAGCCCAAAAGAGTCACAGTGAC...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CAGCTCCACCTCCATAGGCTGCTCGCTCGTGGACGTGGACGATTCTTCCAGACTTTTGGGGAGGGCAGGTaGGTTTTCTGGATGAAGAGC +
Preference number: 5 (lower is better)
Translates to: QLHLHRLLARGRGRFFQTFGEGR*VFWMKS
Trigger: GCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA...AGTCTGGAAGAATCGTCCACGTCCACGAGCGAGCAGCCTATGGAGGTGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGAGGCGCTGCAGGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCTGTGCCCTTGGCAATaGCTCTTGGAAAGACTCAGA +
Preference number: 5 (lower is better)
Translates to: GGAAGSRTGRARSRCSELLCPWQ*LLERLR
Trigger: TCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAG...CAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CTCTTCCGGAACGGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGGAAGGTGGCCTCTGCTaGGGTGACAATGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: LFRNGVEGFKNADFSSEEEGGLC*GDNDLS
Trigger: GGAGAGGTCATTGTCACCCAAGCAGAGGCCACCTTC...CTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACCGTTCCGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GTGGGTCTTGTCTGGAAGTGGCACCGTCCCCTCCTTGGGGGTGTGAGGCTCCTTGAATGTGACCTCTCCTaGGTCAACAGCAACTTCTCA +
Preference number: 5 (lower is better)
Translates to: VGLVWKWHRPLLGGVRLLECDLS*VNSNFS
Trigger: TGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTC...AAGGAGCCTCACACCCCCAAGGAGGGGACGGTGCCACTTCCAGACAAGACCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AACAGGTTGGACACGCGGTGGAACTGCTCGTACAGGTTCAGCGGCAGGAACGAGCTGGGGATTGGAGAGTaGGAGAGAATGCTCAAATGG +
Preference number: 5 (lower is better)
Translates to: NRLDTRWNCSYRFSGRNELGIGE*ERMLKW
Trigger: CCATTTGAGCATTCTCTCCAACTCTCCAATCCCCAG...CTCGTTCCTGCCGCTGAACCTGTACGAGCAGTTCCACCGCGTGTCCAACCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTGGCAGGGTCTGTTGTaGATGGCTCTGTCACTCTTG +
Preference number: 5 (lower is better)
Translates to: GVEGFKNADFSSEESGWLWQGLL*MALSLL
Trigger: CAAGAGTGACAGAGCCATCAACAACAGACCCTGCCA...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AGAGGCTGTGGCTGGCTCTCAAATGACGACAGCTGGCTTTCTCTGTGCAACAGTGGGACGATGTTGTCCTaGCGGAGACAGACCACATCC +
Preference number: 5 (lower is better)
Translates to: RGCGWLSNDDSWLSLCNSGTMLS*RRQTTS
Trigger: GGATGTGGTCTGTCTCCGCAAGGACAACATCGTCCC...ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGAGAGCCAGCCACAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTTGTCTGAACTTCAAGTaGGTCTCCCCGTCAATGTCC +
Preference number: 5 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSCLNFK*VSPSMS
Trigger: GGACATTGACGGGGAGACCAACTTGAAGTTCAGACA...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp TGCGGCCACGCTGCTCCCATGCACCCCCGAGAGGTAGTAGTGGTGGTCTTTGAAATCAGGAGGTCCAGCTaGGTTCTCTTCAAATGGATC +
Preference number: 5 (lower is better)
Translates to: CGHAAPMHPREVVVVVFEIRRSS*VLFKWI
Trigger: GATCCATTTGAAGAGAACCAAGCTGGACCTCCTGAT...TTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGCAGCGTGGCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp AGAGGTGGTCACACCATGGGCGATGGCTTGGACGAAGACCCAGTAGTTGAAGAGCGTTTGCGCGTGCTGTaGAAGTCCATTATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RGGHTMGDGLDEDPVVEERLRVL*KSIMAR
Trigger: CCTGGCCATAATGGACTTCAACAGCACGCGCAAACG...CTCTTCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAACCGTGTCGGCGCCCTaGGTGTACAGGCAGATGGCG +
Preference number: 5 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRTVSAP*VYRQMA
Trigger: CGCCATCTGCCTGTACACCAAGGGCGCCGACACGGT...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCTGTGCCCTTGGCAATTGCTCTTGGAAAGACTCAGATAGCCTGTTGCTGCTGGATCATGTTGATGTCGTaGGCACCGTCCCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: PVPLAIALGKTQIACCCWIMLMS*APSPMA
Trigger: GGCCATCGGGGACGGTGCCAACGACATCAACATGAT...CCAGCAGCAACAGGCTATCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGAGCGGTCTTGATCATGTaGATGTCGTTGGCACCGTCC +
Preference number: 5 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGAVLIM*MSLAPS
Trigger: GGACGGTGCCAACGACATCAACATGATCAAGACCGC...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AACAGGTTGGACACGCGGTGGAACTGCTCGTACAGGTTCAGCGGCAGGAACGAGGTGCTGTACAGGAGGTaGAAAAGAGCCAGGAACCAT +
Preference number: 5 (lower is better)
Translates to: NRLDTRWNCSYRFSGRNEVLYRR*KRARNH
Trigger: ATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCAC...CTCGTTCCTGCCGCTGAACCTGTACGAGCAGTTCCACCGCGTGTCCAACCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp ATGAACTCGGACAGGATGAACATGGACATCGGGATGGTGACGCTGAGCAGGATGTCCACCTTCTCCTCCTaGGCACGTAGCTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: MNSDRMNMDIGMVTLSRMSTFSS*ARSSLR
Trigger: CCTCAAGGAGCTACGTGCCAAGGAGGAGAAGGTGGA...CATCCTGCTCAGCGTCACCATCCCGATGTCCATGTTCATCCTGTCCGAGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp ACGTCAGCTGGCCTGAAAGAAATGACTGGCTCCCCAGAGGCTGTGGCTGGCTCTCTGTGCCCTTGGCAATaGCTCTTGGAAAGACTCAGA +
Preference number: 5 (lower is better)
Translates to: TSAGLKEMTGSPEAVAGSLCPWQ*LLERLR
Trigger: TCTGAGTCTTTCCAAGAGCAATTGCCAAGGGCACAG...AGAGCCAGCCACAGCCTCTGGGGAGCCAGTCATTTCTTTCAGGCCAGCTGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CTCTGCTTGGGTGACAATGACCTCTCCTGTGCCCTTGGCAATTGCTCTTGGAAAGGTGTGAGGCTCCTTTaGCCAGCTCTTCCGGAACGG +
Preference number: 5 (lower is better)
Translates to: LCLGDNDLSCALGNCSWKGVRLL*PALPER
Trigger: CCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC...TTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGTCATTGTCACCCAAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCATGAGGAAGAACAGGTaGGACACGCGGTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: FKNADFSSEESGWLSNVSMRKNR*DTRWNC
Trigger: GCAGTTCCACCGCGTGTCCAACCTGTTCTTCCTCAT...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTCGGCTGGGACGATGTaGTCCTTGCGGAGACAGACC +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWSAGTM*SLRRQT
Trigger: GGTCTGTCTCCGCAAGGACAACATCGTCCCAGCCGA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCTCGGCTGGGACGATGTaGTCCTTGCGGAGACAGACC +
Preference number: 5 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSSAGTM*SLRRQT
Trigger: GGTCTGTCTCCGCAAGGACAACATCGTCCCAGCCGA...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAATCATGTTGATGTCGTaGGCACCGTCCCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEIMLMS*APSPMA
Trigger: GGCCATCGGGGACGGTGCCAACGACATCAACATGAT...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CAA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCACCATGGGCGATGGCTaGGACGAAGACCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: FKNADFSSEESGWLSNVSTMGDG*DEDPVV
Trigger: AACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGT...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGAAGCAGAACTGGCCGAGCACGAAGTCGCTGTTCTGAACTGCCTGCATGCCCTAGTGTCATGAAGAAGTaGACCAGAGAGGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: GSRTGRARSRCSELPACPSVMKK*TREVVT
Trigger: TGTGACCACCTCTCTGGTCAACTTCTTCATGACACT...AGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CAA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCAGGGCGGTCCAGTACTaGATGATAAGAATGACCTCC +
Preference number: 5 (lower is better)
Translates to: GVEGFKNADFSSEESGWLRAVQY*MIRMTS
Trigger: GGAGGTCATTCTTATCATCAAGTACTGGACCGCCCT...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS TCA 90 bp TGGTCTTGTATTTCTTCCTTTGCCAGCACAGGATCACCTTCTCCTTaGACTGCCCGTTGTAGGCACGGTTGTTGGCCTGGACCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: WSCISSFASTGSPSP*TARCRHGCWPGPSR
Trigger: CCTGGAAGGTCCAGGCCAACAACCGTGCCTACAACGGGCAGTTCAAGGAGAAGGTGATCCTGTGCTGGCAAAGGAAGAAATACAAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000531925.5
ENST00000533993.5
ENST00000587160.2
CDS GCA 90 bp ATGTTGTCCTTGCGGAGACAGACCACATCCCCCACGCACAGATCCTaGCATTTCTTCTGCTTGAAGCTCTTCCCCATCAGAATCTGGCAG +
Preference number: 5 (lower is better)
Translates to: MLSLRRQTTSPTHRS*HFFCLKLFPIRIWQ
Trigger: CTGCCAGATTCTGATGGGGAAGAGCTTCAAGCAGAAGAAATGGCAGGATCTGTGCGTGGGGGATGTGGTCTGTCTCCGCAAGGACAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000533993.5
CDS-3UTR CAA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAATGAGGAAGAACAGGTaGGACACGCGGTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEMRKNR*DTRWNC
Trigger: GCAGTTCCACCGCGTGTCCAACCTGTTCTTCCTCAT...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCCTCGGAGGAGGAGGTaGCCAATGTCCAGGGAGTAT +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWPRRRR*PMSREY
Trigger: ATACTCCCTGGACATTGGCAACCTCCTCCTCCGAGG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAATGACCAAGGCCAGCTaGACCTGCGACAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRMTKAS*TCDRDS
Trigger: GGAGTCCCTGTCGCAGGTCAAGCTGGCCTTGGTCAT...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AAGAATGTGACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTACCTGGTGGTACTTCTaGACCAGGGCCACGATCAGG +
Preference number: 5 (lower is better)
Translates to: KNVTSPWSTATSQEKVASTWWYF*TRATIR
Trigger: CCTGATCGTGGCCCTGGTCAAGAAGTACCACCAGGT...AGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CTGCTCAAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAGCGGTCTTGATCATGTaGATGTCGTTGGCACCGTCC +
Preference number: 5 (lower is better)
Translates to: LLKEPNVENWQGAVQEVEAVLIM*MSLAPS
Trigger: GGACGGTGCCAACGACATCAACATGATCAAGACCGC...TTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CAA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGCGGTCTTGATCATGTaGATGTCGTTGGCACCGTCC +
Preference number: 5 (lower is better)
Translates to: LPDLVAESPPEICGSCLEAVLIM*MSLAPS
Trigger: GGACGGTGCCAACGACATCAACATGATCAAGACCGC...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAACCCACGTCCGCGGTCTaGATCATGTTGATGTCGTTG +
Preference number: 5 (lower is better)
Translates to: LPDLVAESPPEICGSCLEPTSAV*IMLMSL
Trigger: CAACGACATCAACATGATCAAGACCGCGGACGTGGG...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCAGTGTCATGAAGAAGTaGACCAGAGAGGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: GVEGFKNADFSSEESGWLSVMKK*TREVVT
Trigger: TGTGACCACCTCTCTGGTCAACTTCTTCATGACACT...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp ACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCACCGTCGACTCAGATAGCCTGTaGCTGCTGGTGAGCACATAT +
Preference number: 5 (lower is better)
Translates to: TIRACLNFKLVSPSMSTVDSDSL*LLVSTY
Trigger: ATATGTGCTCACCAGCAGCAACAGGCTATCTGAGTC...GACGGTGGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCACCTCTCCTGTGCCCTaGGCAATTGCTCTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: FKNADFSSEESGWLSNVSTSPVP*AIALGK
Trigger: CTTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGT...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGTGTGGAGGGCTTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCCGGATGACATTGGTCTaGTATTTCTTCCTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: GVEGFKNADFSSEESGWLRMTLV*YFFLCQ
Trigger: CTGGCAAAGGAAGAAATACAAGACCAATGTCATCCG...GAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAAGCCCTCCACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp ACCATCAGGGCCTGTCTGAACTTCAAGTTGGTCTCCCCGTCAATGTCCACCGTCGCCGTGCGGATGACATaGGTCTTGTATTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TIRACLNFKLVSPSMSTVAVRMT*VLYFFL
Trigger: AAGGAAGAAATACAAGACCAATGTCATCCGCACGGC...GACGGTGGACATTGACGGGGAGACCAACTTGAAGTTCAGACAGGCCCTGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGATGGCTCTGTCACTCTaGTGTCTCCCCATGTCGTCC +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWMALSL*CLPMSS
Trigger: GGACGACATGGGGAGACACAAGAGTGACAGAGCCAT...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGTGGCAGGGTCTGTTGTaGATGGCTCTGTCACTCTTG +
Preference number: 5 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKWQGLL*MALSLL
Trigger: CAAGAGTGACAGAGCCATCAACAACAGACCCTGCCA...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGATAGTGGCCAGTTCTTaGTGGGTGACCATCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWIVASS*WVTIRA
Trigger: GGCCCTGATGGTCACCCACAAAGAACTGGCCACTAT...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCACACGTCACTGTGCCTaGAAAGGACGCCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: FKNADFSSEESGWLSNVSTRHCA*KGRHLL
Trigger: AAGAAGATGGCGTCCTTTCAAGGCACAGTGACGTGT...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCCCCACGTCCGCGGTCTaGATCATGTTGATGTCGTTG +
Preference number: 5 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSPTSAV*IMLMSL
Trigger: CAACGACATCAACATGATCAAGACCGCGGACGTGGG...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CAA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTACCATGGGCGATGGCTaGGACGAAGACCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGTMGDG*DEDPVV
Trigger: AACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGT...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTGGTCACTGTGACTCTTTaGGGCTCGAAGCTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: RKACGVLVFRGRPPACWLVTVTL*GSKLPL
Trigger: AAGAGGCAGCTTCGAGCCCAAAAGAGTCACAGTGAC...CAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CTTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAACGATTCTTCCAGACTaGGTGGCAGAGTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: LPDLVAESPPEICGSCLETILPD*VAESPP
Trigger: AGGTGGAGACTCTGCCACCAAGTCTGGAAGAATCGT...TTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp TTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAGCCAGCGTGACTCCTTaGGGCTCGAAGATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: FGEGRLVFWMKSGLSIHRASVTP*GSKMPL
Trigger: AAGAGGCATCTTCGAGCCCAAAGGAGTCACGCTGGC...TCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTGAAGCATGTGGAGTCCTaGTCTTTAGAGGAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: RKACGVLVFRGRPPACWLKHVES*SLEEGP
Trigger: GGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTT...CAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTGGCAGGGTCTGTTGTaGATGGCTCTGTCACTCTTG +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWWQGLL*MALSLL
Trigger: CAAGAGTGACAGAGCCATCAACAACAGACCCTGCCA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AAGAATGTGACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTATCTGGCAGGGTCTGTaGTTGATGGCTCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: KNVTSPWSTATSQEKVASIWQGL*LMALSL
Trigger: GAGTGACAGAGCCATCAACAACAGACCCTGCCAGAT...AGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTATCTGGCAGGGTCTGTaGTTGATGGCTCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGIWQGL*LMALSL
Trigger: GAGTGACAGAGCCATCAACAACAGACCCTGCCAGAT...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCTGGTGCTGCGGGCCTaGGCAGGCACGTCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: RNTQQFEFQHPQIKACESLVLRA*AGTSCG
Trigger: GCCGCAGGACGTGCCTGCCAAGGCCCGCAGCACCAG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAACCCACGTCCGCGGTCTaGATCATGTTGATGTCGTTG +
Preference number: 5 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKPTSAV*IMLMSL
Trigger: CAACGACATCAACATGATCAAGACCGCGGACGTGGG...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGGACTCAGATAGCCTGTaGCTGCTGGTGAGCACATAT +
Preference number: 5 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKDSDSL*LLVSTY
Trigger: ATATGTGCTCACCAGCAGCAACAGGCTATCTGAGTC...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTGTAATTCCAGTGCTTaGAAAAGCGGAGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWCNSSA*KSGGRR
Trigger: CCGCCTGCCTCCGCTTTTCAAAGCACTGGAATTACA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTCTGGGGATTGGAGAGTaGGAGAGAATGCTCAAATGG +
Preference number: 5 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGLGIGE*ERMLKW
Trigger: CCATTTGAGCATTCTCTCCAACTCTCCAATCCCCAG...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTGGCCGTGCGGATGACATaGGTCTTGTATTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: RKACGVLVFRGRPPACWLAVRMT*VLYFFL
Trigger: AAGGAAGAAATACAAGACCAATGTCATCCGCACGGC...CAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTGTCTGAACTTCAAGTaGGTCTCCCCGTCAATGTCC +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWCLNFK*VSPSMS
Trigger: GGACATTGACGGGGAGACCAACTTGAAGTTCAGACA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AGAGGCTGTGGCTGGCTCTCAAATGACGACAGCTGGCTTTCTCTGTGCAACAGTTGGTCTTTGAATTCTTaGACTGAGAAACCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: RGCGWLSNDDSWLSLCNSWSLNS*TEKPKP
Trigger: CGGCTTCGGTTTCTCAGTCAAAGAATTCAAAGACCA...ACTGTTGCACAGAGAAAGCCAGCTGTCGTCATTTGAGAGCCAGCCACAGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AAGAATGTGACCTCTCCTTGGTCAACAGCAACTTCTCAGGAGAAGGTGGCCTCTCCGCTGATGCAGCACTaGTTGAAGGTCAAGATGTTC +
Preference number: 5 (lower is better)
Translates to: KNVTSPWSTATSQEKVASPLMQH*LKVKMF
Trigger: GAACATCTTGACCTTCAACAAGTGCTGCATCAGCGG...AGAGGCCACCTTCTCCTGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCCGCTGATGCAGCACTaGTTGAAGGTCAAGATGTTC +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWPLMQH*LKVKMF
Trigger: GAACATCTTGACCTTCAACAAGTGCTGCATCAGCGG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp GGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTCCGCTGATGCAGCACTaGTTGAAGGTCAAGATGTTC +
Preference number: 5 (lower is better)
Translates to: GDEDHNHQLVHQEVQLGSPLMQH*LKVKMF
Trigger: GAACATCTTGACCTTCAACAAGTGCTGCATCAGCGG...AGAACCAAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp ATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATCGTTTGCGCGTGCTGTaGAAGTCCATTATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: IFGEGRLVFWMKSGLSIHRLRVL*KSIMAR
Trigger: CCTGGCCATAATGGACTTCAACAGCACGCGCAAACG...ATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCTGCATGCTGGTTGACTTGCAGCAGAACTGGCTGGAGCTTCTTCTTCCCAGGAGTGAGCACCCATATTTaGATGTTGCTCTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: PACWLTCSRTGWSFFFPGVSTHI*MLLFLR
Trigger: TCTCAAGAAGAGCAACATCAAAATATGGGTGCTCAC...TCCTGGGAAGAAGAAGCTCCAGCCAGTTCTGCTGCAAGTCAACCAGCATGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp GGTGTGAGGCTCCTTTTGCCAGCTCTTCCGGAACGGTGTGGAGGGCTTCAAAAAGTGAGCACCCATATTTaGATGTTGCTCTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: GVRLLLPALPERCGGLQKVSTHI*MLLFLR
Trigger: TCTCAAGAAGAGCAACATCAAAATATGGGTGCTCAC...TTTTTGAAGCCCTCCACACCGTTCCGGAAGAGCTGGCAAAAGGAGCCTCACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AAAGAGCCCAATGTAGAGAACTGGCAGGGTGCTGTACAGGAGGTTGAAAAGAGCGTGCTGTACAGGAGGTaGAAAAGAGCCAGGAACCAT +
Preference number: 5 (lower is better)
Translates to: KEPNVENWQGAVQEVEKSVLYRR*KRARNH
Trigger: ATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCAC...GCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526847.1
ENST00000531925.5
CDS-3UTR CAA 90 bp CATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATTTGGGGAGGGCAGGTaGGTTTTCTGGATGAAGAGC +
Preference number: 5 (lower is better)
Translates to: HIWGGQVGFLDEERIVYPFGEGR*VFWMKS
Trigger: GCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAA...TGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CATATTTGGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCAACCTCTCCTGTGCCCTaGGCAATTGCTCTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: HIWGGQVGFLDEERIVYPTSPVP*AIALGK
Trigger: CTTTCCAAGAGCAATTGCCAAGGGCACAGGAGAGGT...TGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCCAAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp AGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTTGCTTGTATTTCTTCCTTaGCCAGCACAGGATCACCTT +
Preference number: 5 (lower is better)
Translates to: RKACGVLVFRGRPPACWLLVFLP*PAQDHL
Trigger: AAGGTGATCCTGTGCTGGCAAAGGAAGAAATACAAG...CAACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp ATCAGAATCTGGCAGGGTCTGTTGTTGATGGCTCTGTCACTCTTGTGTCTCCCCCTTGTATTTCTTCCTTaGCCAGCACAGGATCACCTT +
Preference number: 5 (lower is better)
Translates to: IRIWQGLLLMALSLLCLPLVFLP*PAQDHL
Trigger: AAGGTGATCCTGTGCTGGCAAAGGAAGAAATACAAG...GGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGGCCGTGCGGATGACATaGGTCTTGTATTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWAVRMT*VLYFFL
Trigger: AAGGAAGAAATACAAGACCAATGTCATCCGCACGGC...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTGCCATTTCTTCTGCTaGAAGCTCTTCCCCATCAGA +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWCHFFC*KLFPIR
Trigger: TCTGATGGGGAAGAGCTTCAAGCAGAAGAAATGGCA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGATCAGGAGGTCCAGCTaGGTTCTCTTCAAATGGATC +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWIRRSS*VLFKWI
Trigger: GATCCATTTGAAGAGAACCAAGCTGGACCTCCTGAT...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AAAGAAAAGCATGTGGAGTCCTTGTCTTTAGAGGAAGGCCCCCTGCATGCTGGTGAATGTGACCTCTCCTaGGTCAACAGCAACTTCTCA +
Preference number: 5 (lower is better)
Translates to: KEKHVESLSLEEGPLHAGECDLS*VNSNFS
Trigger: TGAGAAGTTGCTGTTGACCAAGGAGAGGTCACATTC...ACCAGCATGCAGGGGGCCTTCCTCTAAAGACAAGGACTCCACATGCTTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCTTGTATTTCTTCCTTaGCCAGCACAGGATCACCTT +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWLVFLP*PAQDHL
Trigger: AAGGTGATCCTGTGCTGGCAAAGGAAGAAATACAAG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGCGGATGACATTGGTCTaGTATTTCTTCCTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWRMTLV*YFFLCQ
Trigger: CTGGCAAAGGAAGAAATACAAGACCAATGTCATCCG...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp CCACAAATAAAGGCTTGTGAAAGTCAAAAGAAGAGCAGTGGCCGGGTGTGGTGGTGGTCTTTGAATTCTTaGACTGAGAAACCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: PQIKACESQKKSSGRVWWWSLNS*TEKPKP
Trigger: CGGCTTCGGTTTCTCAGTCAAAGAATTCAAAGACCA...CCACCACACCCGGCCACTGCTCTTCTTTTGACTTTCACAAGCCTTTATTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp GGGGAGGGCAGGTTGGTTTTCTGGATGAAGAGCGGATTGTCTATCCATAGAAAACTGATGCAGCACTTGTaGAAGGTCAAGATGTTCTGC +
Preference number: 5 (lower is better)
Translates to: GEGRLVFWMKSGLSIHRKLMQHL*KVKMFC
Trigger: GCAGAACATCTTGACCTTCAACAAGTGCTGCATCAG...TTTTCTATGGATAGACAATCCGCTCTTCATCCAGAAAACCAACCTGCCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp TTCAAAAATGCTGACTTCTCCTCCGAGGAGTCTGGCTGGCTCTCCAACGTCAGCACCCATATTTTGATGTaGCTCTTCTTGAGACATTTG +
Preference number: 5 (lower is better)
Translates to: FKNADFSSEESGWLSNVSTHILM*LFLRHL
Trigger: CAAATGTCTCAAGAAGAGCAACATCAAAATATGGGT...GCTGACGTTGGAGAGCCAGCCAGACTCCTCGGAGGAGAAGTCAGCATTTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp TTCCAGACTTGGTGGCAGAGTCTCCACCTGAGATTTGTGGGTCTTGTCTGGAAGTTGATGTTGCTCTTCTaGAGACATTTGATGGTTTCA +
Preference number: 5 (lower is better)
Translates to: FQTWWQSLHLRFVGLVWKLMLLF*RHLMVS
Trigger: TGAAACCATCAAATGTCTCAAGAAGAGCAACATCAA...CTTCCAGACAAGACCCACAAATCTCAGGTGGAGACTCTGCCACCAAGTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS-3UTR CAA 90 bp ATCAGAATCTGGCAGGGTCTGTTGTTGATGGCTCTGTCACTCTTGTGTCTCCCCTTGATGTTGCTCTTCTaGAGACATTTGATGGTTTCA +
Preference number: 5 (lower is better)
Translates to: IRIWQGLLLMALSLLCLPLMLLF*RHLMVS
Trigger: TGAAACCATCAAATGTCTCAAGAAGAGCAACATCAA...GGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp CACCACGGAGATGAAGATCACAACCACCAGCTTGTTCATCAGGAGGTCCAGCTTACCCATATTTTGATGTaGCTCTTCTTGAGACATTTG +
Preference number: 5 (lower is better)
Translates to: HHGDEDHNHQLVHQEVQLTHILM*LFLRHL
Trigger: CAAATGTCTCAAGAAGAGCAACATCAAAATATGGGT...AAGCTGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCCGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531925.5
CDS-3UTR CAA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTGGGACGATGTTGTCCTaGCGGAGACAGACCACATCC +
Preference number: 5 (lower is better)
Translates to: RNTQQFEFQHPQIKACESGTMLS*RRQTTS
Trigger: GGATGTGGTCTGTCTCCGCAAGGACAACATCGTCCC...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTATGAGGAAGAACAGGTaGGACACGCGGTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: RNTQQFEFQHPQIKACESMRKNR*DTRWNC
Trigger: GCAGTTCCACCGCGTGTCCAACCTGTTCTTCCTCAT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTAGCCAGGAGAATCGCTaGAACCTGGGAGGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: RNTQQFEFQHPQIKACESSQENR*NLGGGD
Trigger: ATCTCCACCTCCCAGGTTCAAGCGATTCTCCTGGCT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTATCTGGCAGGGTCTGTaGTTGATGGCTCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: RNTQQFEFQHPQIKACESIWQGL*LMALSL
Trigger: GAGTGACAGAGCCATCAACAACAGACCCTGCCAGAT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTACACGTCACTGTGCCTaGAAAGGACGCCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: RNTQQFEFQHPQIKACESTRHCA*KGRHLL
Trigger: AAGAAGATGGCGTCCTTTCAAGGCACAGTGACGTGT...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS-3UTR CAA 90 bp AGAAATACTCAGCAATTCGAATTTCAGCATCCACAAATAAAGGCTTGTGAAAGTCTGATGCAGCACTTGTaGAAGGTCAAGATGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RNTQQFEFQHPQIKACESLMQHL*KVKMFC
Trigger: GCAGAACATCTTGACCTTCAACAAGTGCTGCATCAG...ACTTTCACAAGCCTTTATTTGTGGATGCTGAAATTCGAATTGCTGAGTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526092.6
CDS CCA 72 bp AGAGAGGGTGCGCGGGCTCCCGGGGACGCACAGCAGTaGGAGCACCCGCCGCTCACCGGCGCAGGAGAGGCA +
Preference number: 6 (lower is better)
Translates to: REGARAPGDAQQ*EHPPLTGAGEA
Trigger: TGCCTCTCCTGCGCCGGTGAGCGGCGGGTGCTCCCACTGCTGTGCGTCCCCGGGAGCCCGCGCACCCTCTCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587160.2
CDS GCA 72 bp CCGAGCTCCTGCCACGCCTCGTCCATGTTCACGTTCTaGGCCAGGGCGCGCGGCTCCTTCCGCAGGGACACC +
Preference number: 6 (lower is better)
Translates to: PSSCHASSMFTF*ARARGSFRRDT
Trigger: GGTGTCCCTGCGGAAGGAGCCGCGCGCCCTGGCGCAGAACGTGAACATGGACGAGGCGTGGCAGGAGCTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526847.1
CDS CCA 72 bp AGGCACCCTGAGCCCCTTGAAGATCGAGGACCCAGCTaGGAGCTCAGGTGTCGGGGCCGCACCATAGACGCG +
Preference number: 6 (lower is better)
Translates to: RHPEPLEDRGPS*ELRCRGRTIDA
Trigger: CGCGTCTATGGTGCGGCCCCGACACCTGAGCTCCCAGCTGGGTCCTCGATCTTCAAGGGGCTCAGGGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS CCA 72 bp GCTACGGTTCCCTGGTTCAGATTCGGGCGGAGGTGCTaGGCATGGGGCCAGACGTGGCTCTGGTTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: ATVPWFRFGRRC*AWGQTWLWFSG
Trigger: GCCTGAGAACCAGAGCCACGTCTGGCCCCATGCCCAGCACCTCCGCCCGAATCTGAACCAGGGAACCGTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS GCA 72 bp CATTCATACTTCCTAGCCCGGCCAGGCTGGGCCTTGTaGCTCCTCTCAGGTGCCCCTCTGCCTGGGGAGTCT +
Preference number: 6 (lower is better)
Translates to: HSYFLARPGWAL*LLSGAPLPGES
Trigger: AGACTCCCCAGGCAGAGGGGCACCTGAGAGGAGGCACAAGGCCCAGCCTGGCCGGGCTAGGAAGTATGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000533993.5
ENST00000587160.2
CDS GCA 72 bp CTGGCTACGGTTCCCTGGTTCAGATTCGGGCGGAGGTaGTGGGCATGGGGCCAGACGTGGCTCTGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: LATVPWFRFGRR*WAWGQTWLWFS
Trigger: TGAGAACCAGAGCCACGTCTGGCCCCATGCCCAGCACCTCCGCCCGAATCTGAACCAGGGAACCGTAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS CCA 72 bp CTCCAAAGGAAACCAGGCCATCTGGCTACGGTTCCCTaGTTCAGATTCGGGCGGAGGTGCTGGGCATGGGGC +
Preference number: 6 (lower is better)
Translates to: LQRKPGHLATVP*FRFGRRCWAWG
Trigger: GCCCCATGCCCAGCACCTCCGCCCGAATCTGAACCAGGGAACCGTAGCCAGATGGCCTGGTTTCCTTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS CCA 72 bp CGTGGTTCTGGGACCTCGGGGTCAACCCCAGCTCACTaGGACGATGTTGTCCTTGCGGAGACAGACCACATC +
Preference number: 6 (lower is better)
Translates to: RGSGTSGSTPAH*DDVVLAETDHI
Trigger: GATGTGGTCTGTCTCCGCAAGGACAACATCGTCCCAGTGAGCTGGGGTTGACCCCGAGGTCCCAGAACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533107.3
CDS CCA 72 bp TGCTGGCCAGCAAGAGCATGTCGGCCTGGTGTGGAGTaGGGGGCAGCGTTGCAAGAGGGGATGCAAGACAAA +
Preference number: 6 (lower is better)
Translates to: CWPARACRPGVE*GAALQEGMQDK
Trigger: TTTGTCTTGCATCCCCTCTTGCAACGCTGCCCCCCACTCCACACCAGGCCGACATGCTCTTGCTGGCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533107.3
CDS CCA 72 bp ATTTTCCTGGCCCCCTCCAAAGGAAACCAGGCCATCTaGCTACGGTTCCCTGGTTCAGATTCGGGCGGAGGT +
Preference number: 6 (lower is better)
Translates to: IFLAPSKGNQAI*LRFPGSDSGGG
Trigger: ACCTCCGCCCGAATCTGAACCAGGGAACCGTAGCCAGATGGCCTGGTTTCCTTTGGAGGGGGCCAGGAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526092.6
ENST00000533107.3
CDS GCA 72 bp GTGGGGGCAGACTGGGGATTGGAGAGTTGGAGAGAATaGTCAAATGGCCAGAATCCACTCGAAGTGTATCGG +
Preference number: 6 (lower is better)
Translates to: VGADWGLESWRE*SNGQNPLEVYR
Trigger: CCGATACACTTCGAGTGGATTCTGGCCATTTGAGCATTCTCTCCAACTCTCCAATCCCCAGTCTGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310127.10
ENST00000531925.5
CDS GCA 72 bp TTGCGGAGACAGACCACATCCCCCACGCACAGATCCTaGCATTTCTTCTGCTTGAAGCTCTTCCCCATCAGA +
Preference number: 6 (lower is better)
Translates to: LRRQTTSPTHRS*HFFCLKLFPIR
Trigger: TCTGATGGGGAAGAGCTTCAAGCAGAAGAAATGGCAGGATCTGTGCGTGGGGGATGTGGTCTGTCTCCGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000533993.5
CDS CAA 90 bp TTCTGCTTGAAGCTCTTCCCCATCAGAATCTGGCAGGGTCTGTTGTaGATGGCTCTGTCACTCTTGTGTCTCCCCATGTCGTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: FCLKLFPIRIWQGLL*MALSLLCLPMSSTR
Trigger: CCTGGTGGACGACATGGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGATGGGGAAGAGCTTCAAGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000533993.5
CDS TCA 72 bp ATTTCTTCCTTTGCCAGCACAGGATCACCTTCTCCTTaGACTGCCCGTTGTAGGCACGGTTGTTGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: ISSFASTGSPSP*TARCRHGCWPG
Trigger: TCCAGGCCAACAACCGTGCCTACAACGGGCAGTTCAAGGAGAAGGTGATCCTGTGCTGGCAAAGGAAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000531925.5
ENST00000533993.5
ENST00000587160.2
CDS GCA 72 bp GTGGGGGCAGACTGGGGATTGGAGAGTTGGAGAGAATaGTCAAATGGCCAGAATCCACTCGAAGTGTATCTC +
Preference number: 6 (lower is better)
Translates to: VGADWGLESWRE*SNGQNPLEVYL
Trigger: GAGATACACTTCGAGTGGATTCTGGCCATTTGAGCATTCTCTCCAACTCTCCAATCCCCAGTCTGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587160.2
CDS CAA 90 bp TTCTTCTGCTTGAAGCTCTTCCCCATCAGAATCTGGCAGGGTCTGTaGTTGATGGCTCTGTCACTCTTGTGTCTCCCCATGTCGTCCACC +
Preference number: 6 (lower is better)
Translates to: FFCLKLFPIRIWQGL*LMALSLLCLPMSST
Trigger: GGTGGACGACATGGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGATGGGGAAGAGCTTCAAGCAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000533993.5
CDS CAA 72 bp TTGAAGCTCTTCCCCATCAGAATCTGGCAGGGTCTGTaGTTGATGGCTCTGTCACTCTTGTGTCTCCCCATG +
Preference number: 6 (lower is better)
Translates to: LKLFPIRIWQGL*LMALSLLCLPM
Trigger: CATGGGGAGACACAAGAGTGACAGAGCCATCAACAACAGACCCTGCCAGATTCTGATGGGGAAGAGCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310127.10
ENST00000525591.5
ENST00000526092.6
ENST00000533993.5
CDS CAA 90 bp AGCTTGTTCATCAGGAGGTCCAGCTTGGTTCTCTTCAAATGGATCTaGCCACAGTTCTTCATAATTTTTGTGTCAAAACCTACAAACATG +
Preference number: 6 (lower is better)
Translates to: SLFIRRSSLVLFKWI*PQFFIIFVSKPTNM
Trigger: CATGTTTGTAGGTTTTGACACAAAAATTATGAAGAACTGTGGCAAGATCCATTTGAAGAGAACCAAGCTGGACCTCCTGATGAACAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525591.5
CDS CAA 72 bp ATCAGGAGGTCCAGCTTGGTTCTCTTCAAATGGATCTaGCCACAGTTCTTCATAATTTTTGTGTCAAAACCT +
Preference number: 6 (lower is better)
Translates to: IRRSSLVLFKWI*PQFFIIFVSKP
Trigger: AGGTTTTGACACAAAAATTATGAAGAACTGTGGCAAGATCCATTTGAAGAGAACCAAGCTGGACCTCCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525591.5