RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP8B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000081923

Ensembl transcript IDs: ENST00000585322.2, ENST00000588255.1, ENST00000589147.5, ENST00000591728.1, ENST00000642462.1, ENST00000648039.1, ENST00000648467.1, ENST00000648908.2

Found 638 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCGTAGCCCCGCTGGTGCGAGAAGGCGTAGGCCGAGCGCCGCGTTaGCACGCCCCGGCGGAACACCTGCTGCCGTCGCTGCCACTGCTC +
Preference number: 1 (lower is better)
Translates to: RVAPLVREGVGRAPR*HAPAEHLLPSLPLL
Trigger: GAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGCACCAGCGGGGCTACGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR CCA 90 bp AGCTGTCCCCGGTGCGCCTGTACTCCGCGGTGCCATCCGCCACGATaGCATCAAGCGGCGAGCGCTTCTTGCGGATGCTGCGCCCGGAGG +
Preference number: 1 (lower is better)
Translates to: SCPRCACTPRCHPPR*HQAASASCGCCARR
Trigger: CCTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGCTTGATGCCATCGTGGCGGATGGCACCGCGGAGTACAGGCGCACCGGGGACAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR TCA 90 bp CATCAAGCGGCGAGCGCTTCTTGCGGATGCTGCGCCCGGAGGAGATaGGGTCCGCGTAGCCCCGCTGGTGCGAGAAGGCGTAGGCCGAGC +
Preference number: 1 (lower is better)
Translates to: HQAASASCGCCARRR*GPRSPAGARRRRPS
Trigger: GCTCGGCCTACGCCTTCTCGCACCAGCGGGGCTACGCGGACCTCATCTCCTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGCTTGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 90 bp GAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTGCCGTCGCTaGCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATC +
Preference number: 1 (lower is better)
Translates to: ERRVDTPRRNTCCRR*HCSSAFNRLRCFWI
Trigger: GATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 90 bp CGCGTTGACACGCCCCGGCGGAACACCTGCTGCCGTCGCTGCCACTaGTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCA +
Preference number: 1 (lower is better)
Translates to: RVDTPRRNTCCRRCH*SSAFNRLRCFWILS
Trigger: TGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGGCGTGTCAACGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 90 bp AAGAGCAGAGGCAATGGTGACGGCAAAAGACTGGTAGTCGGAAGGTaGCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGG +
Preference number: 1 (lower is better)
Translates to: KSRGNGDGKRLVVGR*LSILPYGLQISSKR
Trigger: CCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCCGACTACCAGTCTTTTGCCGTCACCATTGCCTCTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR TCA 90 bp CCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATaGAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTA +
Preference number: 1 (lower is better)
Translates to: PLHPALRFADKLQEV*RRGSSMLGPHATSL
Trigger: TAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR TCA 90 bp ATGTTAGGACCCCATGCAACAAGCTTACAAAGAATCTCTTATAGTTaGATAGTAAGTCTCTTTGTCCCACTATGTATAACCCAGGGAATC +
Preference number: 1 (lower is better)
Translates to: MLGPHATSLQRISYS*IVSLFVPLCITQGI
Trigger: GATTCCCTGGGTTATACATAGTGGGACAAAGAGACTTACTATTCAACTATAAGAGATTCTTTGTAAGCTTGTTGCATGGGGTCCTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 90 bp GCCCGGCCGAATAATAGGACTTTTAAAAGTCCTATTTCTTGGCTCTaGTATTGTTTAATAGTCCAACCCAAGGAGTTTGTTATAAAGATT +
Preference number: 1 (lower is better)
Translates to: ARPNNRTFKSPISWL*YCLIVQPKEFVIKI
Trigger: AATCTTTATAACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTTTTAAAAGTCCTATTATTCGGCCGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR CAA 90 bp CCGCGTAGCCCCGCTGGTGCGAGAAGGCGTAGGCCGAGCGCCGCGTaGACACGCCCCGGCGGAACACCTGCTGCCGTCGCTGCCACTGCT +
Preference number: 2 (lower is better)
Translates to: PRSPAGARRRRPSAA*TRPGGTPAAVAATA
Trigger: AGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGCACCAGCGGGGCTACGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTGGTCGAGCAGCCCCATaGGGAGCACGGGCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGGRAAP*GARAGW
Trigger: CCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACC...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTTGCGCCCGGAGGAGATaGGGTCCGCGTAGCCCCGCT +
Preference number: 2 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGCARRR*GPRSPA
Trigger: AGCGGGGCTACGCGGACCTCATCTCCTCCGGGCGCA...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGCCCCGGCGGAACACCTaGTGCCGTCGCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPPRRNT*CRRCHC
Trigger: GCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGG...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGTGCCGTCGCTGCCACTaGTCCTCCGCCTTCAACCGC +
Preference number: 2 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPCRRCH*SSAFNR
Trigger: GCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCA...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGACCTGCTGCCGTCGCTaGCACTGCTCCTCCGCCTTC +
Preference number: 2 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPTCCRR*HCSSAF
Trigger: GAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGT...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGCCTGTACTCCGCGGTaGCATCCGCCACGATGGCAT +
Preference number: 2 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPACTPR*HPPRWH
Trigger: ATGCCATCGTGGCGGATGGCACCGCGGAGTACAGGC...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGTGCCATCCGCCACGATaGCATCAAGCGGCGAGCGCT +
Preference number: 2 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPCHPPR*HQAASA
Trigger: AGCGCTCGCCGCTTGATGCCATCGTGGCGGATGGCA...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGCTGGTAGTCGGAAGGTaGCTCTCCATCCTGCCCTAC +
Preference number: 2 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPLVVGR*LSILPY
Trigger: GTAGGGCAGGATGGAGAGGCACCTTCCGACTACCAG...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTAAGCTCCAAGAGGTATaGAGAAGAGGATCATCGATG +
Preference number: 2 (lower is better)
Translates to: ARRRRPSAALTRPGGTPAKLQEV*RRGSSM
Trigger: CATCGATGATCCTCTTCTTCATACCTCTTGGAGCTT...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTTGGCCAGATGGTCATTaGCAGGAATCGAATGGCAAC +
Preference number: 2 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGWPDGH*QESNGN
Trigger: GTTGCCATTCGATTCCTGTCAATGACCATCTGGCCA...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATGGAGCACGGGCAGGCTaGTGTACAGCACGTTGTAGA +
Preference number: 2 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDGARAG*CTARCR
Trigger: TCTACAACGTGCTGTACACCAGCCTGCCCGTGCTCC...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCGAACCAATCCTCGTATaGAGTCTGCGCAGAGTAGCC +
Preference number: 2 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSEPILV*SLRRVA
Trigger: GGCTACTCTGCGCAGACTGCATACGAGGATTGGTTC...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTTGTATTCCAGCACTATaGAAGTCAAACATGATGCCA +
Preference number: 2 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGCIPAL*KSNMMP
Trigger: TGGCATCATGTTTGACTTTCATAGTGCTGGAATACA...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTGTCTCAGAGCGTTTaGAGCTGTGCCTGTAAATTG +
Preference number: 2 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDLSQSV*SCACKL
Trigger: CAATTTACAGGCACAGCTTCAAACGCTCTGAGACAG...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTAGTATCGTAGGAACTTaGACATCCTTATGTAAGACC +
Preference number: 2 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGSIVGT*TSLCKT
Trigger: GGTCTTACATAAGGATGTGCAAGTTCCTACGATACT...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGGTCGAGCAGCCCCATaGGGAGCACGGGCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFGRAAP*GARAGW
Trigger: CCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGCGGCGAGCGCTTCTTaGGGATGCTGCGCCCGGAGG +
Preference number: 2 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFAASAS*GCCARR
Trigger: CCTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATAAGGAGTACCAGAAATaGACCAAAGTAAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDKEYQK*TKVKAK
Trigger: CTTTGCCTTTACTTTGGTTCATTTCTGGTACTCCTT...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATGAACCAATCCTCGTATaGAGTCTGCGCAGAGTAGCC +
Preference number: 2 (lower is better)
Translates to: GRCLSILPYGLQISSKRYEPILV*SLRRVA
Trigger: GGCTACTCTGCGCAGACTGCATACGAGGATTGGTTC...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp TTTATGGCGAGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACGCCAGGGTAGAGATTTaGGGAACTGCCTGTAAGATA +
Preference number: 2 (lower is better)
Translates to: FMASHIVHQVFDCSDAQHARVEI*GTACKI
Trigger: TATCTTACAGGCAGTTCCTCAAATCTCTACCCTGGC...GTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCTCGCCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591728.1
3UTR-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTATCAGCTGTCCCCGGTaGGCCTGTACTCCGCGGTGC +
Preference number: 2 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFISCPR*ACTPRC
Trigger: GCACCGCGGAGTACAGGCGCACCGGGGACAGCTGAT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATTTGTCACTCACATCCTaGTCGAGCAGCCCCATGAGG +
Preference number: 2 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDLSLTS*SSSPMR
Trigger: CCTCATGGGGCTGCTCGACCAGGATGTGAGTGACAA...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGCCGGGCTGGTCTCCTaGCCTCAAGTGATCCACCTG +
Preference number: 2 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFAGLVS*PQVIHL
Trigger: CAGGTGGATCACTTGAGGTCAGGAGACCAGCCCGGC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR CCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATGTATCCAAGCCAATCTaGAAATTGACTGTTATTACA +
Preference number: 2 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDVSKPI*KLTVIT
Trigger: TGTAATAACAGTCAATTTCCAGATTGGCTTGGATAC...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTGCGCCCGGAGGAGATaGGGTCCGCGTAGCCCCGCT +
Preference number: 2 (lower is better)
Translates to: HETMQSTINFEKVIERTTCARRR*GPRSPA
Trigger: AGCGGGGCTACGCGGACCTCATCTCCTCCGGGCGCA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCCCCGGCGGAACACCTaGTGCCGTCGCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALPRRNT*CRRCHC
Trigger: GCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR CAA 90 bp AAAAGACTGGTAGTCGGAAGGTGCCTCTCCATCCTGCCCTACGGTTaGCAGATAAGCTCCAAGAGGTATGAAGAAGAGGATCATCGATGT +
Preference number: 2 (lower is better)
Translates to: KRLVVGRCLSILPYG*QISSKRYEEEDHRC
Trigger: ACATCGATGATCCTCTTCTTCATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCCGACTACCAGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CCA 90 bp TTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAATGGTGTTCTGGGTCCTaGCGAGGAAGGCAAAGCCAA +
Preference number: 2 (lower is better)
Translates to: FWGSYNDRHSLPVTVEVQWCSGS*RGRQSQ
Trigger: TTGGCTTTGCCTTCCTCGCCAGGACCCAGAACACCA...TTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
3UTR-3UTR CCA 90 bp TTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAATGGTGATGGTGTTCTaGGTCCTGGCGAGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: FWGSYNDRHSLPVTVEVQMVMVF*VLARKA
Trigger: TGCCTTCCTCGCCAGGACCCAGAACACCATCACCAT...TTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
3UTR CAA 90 bp TGCGATGCTTCTGGATCTTATCACTTTCTGATGGCCAGATGGTCATaGACAGGAATCGAATGGCAACGACGGGTAGTAAGCACACAGCAA +
Preference number: 2 (lower is better)
Translates to: CDASGSYHFLMARWS*TGIEWQRRVVSTQQ
Trigger: TTGCTGTGTGCTTACTACCCGTCGTTGCCATTCGATTCCTGTCAATGACCATCTGGCCATCAGAAAGTGATAAGATCCAGAAGCATCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACCTGGTAGTCGGAAGGTaGCTCTCCATCCTGCCCTAC +
Preference number: 2 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYLVVGR*LSILPY
Trigger: GTAGGGCAGGATGGAGAGGCACCTTCCGACTACCAG...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGACCTGCTGCCGTCGCTaGCACTGCTCCTCCGCCTTC +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALTCCRR*HCSSAF
Trigger: GAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGACTCCTGGCCTCAGGTaGTCTCCCCTCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALTPGLR*SPLLSL
Trigger: GAGGCTGAGGAGGGGAGATCACCTGAGGCCAGGAGT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCGAGCAGAGGCAATGGTaGCGGCAAAAGACTGGTAGT +
Preference number: 2 (lower is better)
Translates to: PWIETGLKRSLSTIMYITEQRQW*RQKTGS
Trigger: ACTACCAGTCTTTTGCCGTCACCATTGCCTCTGCTC...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTTGGCCAGATGGTCATTaGCAGGAATCGAATGGCAAC +
Preference number: 2 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFWPDGH*QESNGN
Trigger: GTTGCCATTCGATTCCTGTCAATGACCATCTGGCCA...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGGGGTTTCACCATGTTaGCCGGGCTGGTCTCCTGAC +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALGVSPC*PGWSPD
Trigger: GTCAGGAGACCAGCCCGGCCAACATGGTGAAACCCC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR TCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTAAGCTCCAAGAGGTATaGAGAAGAGGATCATCGATG +
Preference number: 2 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFKLQEV*RRGSSM
Trigger: CATCGATGATCCTCTTCTTCATACCTCTTGGAGCTT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTTGTCACTCACATCCTaGTCGAGCAGCCCCATGAGG +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALLSLTS*SSSPMR
Trigger: CCTCATGGGGCTGCTCGACCAGGATGTGAGTGACAA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGAGCAGAGGCAATGGTaGCGGCAAAAGACTGGTAGT +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALEQRQW*RQKTGS
Trigger: ACTACCAGTCTTTTGCCGTCACCATTGCCTCTGCTC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGAGTATCGTAGGAACTTaGACATCCTTATGTAAGACC +
Preference number: 2 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKSIVGT*TSLCKT
Trigger: GGTCTTACATAAGGATGTGCAAGTTCCTACGATACT...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR TCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACAAGGAGTACCAGAAATaGACCAAAGTAAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYKEYQK*TKVKAK
Trigger: CTTTGCCTTTACTTTGGTTCATTTCTGGTACTCCTT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGCAGGCACAAAAGTTTaGTTTCCAAAAGAAAGCTTT +
Preference number: 2 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFAGTKV*FPKESF
Trigger: AAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR CCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTTGACAGGAATCGAATaGCAACGACGGGTAGTAAGC +
Preference number: 2 (lower is better)
Translates to: HETMQSTINFEKVIERTTLTGIE*QRRVVS
Trigger: GCTTACTACCCGTCGTTGCCATTCGATTCCTGTCAA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTCCTATTTCTTGGCTCTaGTATTGTTTAATAGTCCAA +
Preference number: 2 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFPISWL*YCLIVQ
Trigger: TTGGACTATTAAACAATAGCAGAGCCAAGAAATAGG...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTCTATTGCCCTGGATTaGGACTGGATTAAAACGTTC +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALSIALD*DWIKTF
Trigger: GAACGTTTTAATCCAGTCTCAATCCAGGGCAATAGA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTTCAACCGCTTGCGATaGTTCTGGATCTTATCACTT +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALFNRLR*FWILSL
Trigger: AAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGATGTTAGGACCCCATaGAACAAGCTTACAAAGAAT +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALDVRTP*NKLTKN
Trigger: ATTCTTTGTAAGCTTGTTGCATGGGGTCCTAACATC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTTCAAGCGATTCTTCTaGTTCAGCTTCTCAAATAGG +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALFKRFF*FSFSNR
Trigger: CCTATTTGAGAAGCTGAAGCAGAAGAATCGCTTGAA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGTAATTCTATTGCCCTaGATTGAGACTGGATTAAAA +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALVILLP*IETGLK
Trigger: TTTTAATCCAGTCTCAATCCAGGGCAATAGAATTAC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAATCTGTTAATAAGATaGCCTATAGGGAGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALNLLIR*PIGRKK
Trigger: CTTTTTCCTCCCTATAGGCCATCTTATTAACAGATT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR TCA 72 bp CCGCTGGTGCGAGAAGGCGTAGGCCGAGCGCCGCGTTaGCACGCCCCGGCGGAACACCTGCTGCCGTCGCTG +
Preference number: 3 (lower is better)
Translates to: PLVREGVGRAPR*HAPAEHLLPSL
Trigger: CAGCGACGGCAGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGCACCAGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 72 bp GAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTaGCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGC +
Preference number: 3 (lower is better)
Translates to: ERRVDTPRRNTC*RRCHCSSAFNR
Trigger: GCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 72 bp GCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTaGTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: AERRVDTPRRNT*CRRCHCSSAFN
Trigger: GTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CAA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGAGGCCGAGCGCCGCGTaGACACGCCCCGGCGGAACA +
Preference number: 3 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPRPSAA*TRPGGT
Trigger: TGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCT...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR TCA 72 bp GCGAGCGCTTCTTGCGGATGCTGCGCCCGGAGGAGATaGGGTCCGCGTAGCCCCGCTGGTGCGAGAAGGCGT +
Preference number: 3 (lower is better)
Translates to: ASASCGCCARRR*GPRSPAGARRR
Trigger: ACGCCTTCTCGCACCAGCGGGGCTACGCGGACCTCATCTCCTCCGGGCGCAGCATCCGCAAGAAGCGCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 72 bp GGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTaGCATCCGCCACGATGGCATCAAGCGGCGAGCGCT +
Preference number: 3 (lower is better)
Translates to: GISCPRCACTPR*HPPRWHQAASA
Trigger: AGCGCTCGCCGCTTGATGCCATCGTGGCGGATGGCACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 72 bp ACGCCCCGGCGGAACACCTGCTGCCGTCGCTGCCACTaGTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: TPRRNTCCRRCH*SSAFNRLRCFW
Trigger: CCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 72 bp GTTGACACGCCCCGGCGGAACACCTGCTGCCGTCGCTaGCACTGCTCCTCCGCCTTCAACCGCTTGCGATGC +
Preference number: 3 (lower is better)
Translates to: VDTPRRNTCCRR*HCSSAFNRLRC
Trigger: GCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGGCGTGTCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR CCA 72 bp CGGTGCGCCTGTACTCCGCGGTGCCATCCGCCACGATaGCATCAAGCGGCGAGCGCTTCTTGCGGATGCTGC +
Preference number: 3 (lower is better)
Translates to: RCACTPRCHPPR*HQAASASCGCC
Trigger: GCAGCATCCGCAAGAAGCGCTCGCCGCTTGATGCCATCGTGGCGGATGGCACCGCGGAGTACAGGCGCACCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CAA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGATCCTGCCCTACGGTTaGCAGATAAGCTCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPILPYG*QISSKR
Trigger: CCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGAT...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR GCA 72 bp GCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTaGGATGCTTCTGGATCTTATCACTTTCTGATGGCC +
Preference number: 3 (lower is better)
Translates to: AVAATAPPPSTA*DASGSYHFLMA
Trigger: GGCCATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CAA 90 bp ATGGCGAGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACGCCAGGAAATATAAATaGGCTGCTCTCTTAAACTGC +
Preference number: 3 (lower is better)
Translates to: MASHIVHQVFDCSDAQHHARKYK*AALLNC
Trigger: GCAGTTTAAGAGAGCAGCCAATTTATATTTCCTGGC...GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCTCGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591728.1
3UTR-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATAAGCCAATCTGGAAATaGACTGTTATTACAAGAGCA +
Preference number: 3 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDKPIWK*TVITRA
Trigger: TGCTCTTGTAATAACAGTCAATTTCCAGATTGGCTT...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR CCA 72 bp TTCAAGCGATTCTTCTGCTTCAGCTTCTCAAATAGGTaGGATTACGGGTGCCCACCACCAAGCCCGGCTAAT +
Preference number: 3 (lower is better)
Translates to: FKRFFCFSFSNR*DYGCPPPSPAN
Trigger: ATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCTGAAGCAGAAGAATCGCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAGCGGCGAGCGCTTCTaGCGGATGCTGCGCCCGGAG +
Preference number: 3 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALSGERF*RMLRPE
Trigger: CTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGCT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR TCA 72 bp CCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATaGAGAAGAGGATCATCGATGTTAGGACCCCATGCA +
Preference number: 3 (lower is better)
Translates to: PALRFADKLQEV*RRGSSMLGPHA
Trigger: TGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR CCA 72 bp TTTCTGATGGCCAGATGGTCATTGACAGGAATCGAATaGCAACGACGGGTAGTAAGCACACAGCAACAGCCA +
Preference number: 3 (lower is better)
Translates to: FLMARWSLTGIE*QRRVVSTQQQP
Trigger: TGGCTGTTGCTGTGTGCTTACTACCCGTCGTTGCCATTCGATTCCTGTCAATGACCATCTGGCCATCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTAAAAATAGACGTGCTTaGTGGCCGCATCCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFKNRRA*WPHPSL
Trigger: CAGGCTGGGATGCGGCCACAAAGCACGTCTATTTTT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR CAA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCATCCTGCCCTACGGTTaGCAGATAAGCTCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: PWIETGLKRSLSTIMYITILPYG*QISSKR
Trigger: CCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGAT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CAA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAAAATCGGAGGCTCAGTTaGTCACTCACATCCTGGTCG +
Preference number: 3 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKNRRLS*SLTSWS
Trigger: CGACCAGGATGTGAGTGACAAACTGAGCCTCCGATT...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATGGCCAGATGGTCATaGACAGGAATCGAATGGCAA +
Preference number: 3 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYMARWS*TGIEWQ
Trigger: TTGCCATTCGATTCCTGTCAATGACCATCTGGCCAT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAATCGGAGGCTCAGTTaGTCACTCACATCCTGGTCG +
Preference number: 3 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALNRRLS*SLTSWS
Trigger: CGACCAGGATGTGAGTGACAAACTGAGCCTCCGATT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CAA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTCCGCCTTCAACCGCTaGCGATGCTTCTGGATCTTA +
Preference number: 3 (lower is better)
Translates to: HETMQSTINFEKVIERTTSAFNR*RCFWIL
Trigger: TAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTGCTTTGTAATTCTATaGCCCTGGATTGAGACTGGA +
Preference number: 3 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALCFVIL*PWIETG
Trigger: TCCAGTCTCAATCCAGGGCAATAGAATTACAAAGCA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAAGCCAATCTGGAAATaGACTGTTATTACAAGAGCA +
Preference number: 3 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALKPIWK*TVITRA
Trigger: TGCTCTTGTAATAACAGTCAATTTCCAGATTGGCTT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR TCA 72 bp AAATACAACATGCTTTGTAATTCTATTGCCCTGGATTaGGACTGGATTAAAACGTTCCCTTTCAACCATAAT +
Preference number: 3 (lower is better)
Translates to: KYNMLCNSIALD*DWIKTFPFNHN
Trigger: ATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAGAATTACAAAGCATGTTGTATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
3UTR CAA 72 bp CCCGCTGGTGCGAGAAGGCGTAGGCCGAGCGCCGCGTaGACACGCCCCGGCGGAACACCTGCTGCCGTCGCT +
Preference number: 4 (lower is better)
Translates to: PAGARRRRPSAA*TRPGGTPAAVA
Trigger: AGCGACGGCAGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGCACCAGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTCCCCGGCGGAACACCTaGTGCCGTCGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGPRRNT*CRRCHC
Trigger: GCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGG...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTGCGGCGAGCGCTTCTTaGGGATGCTGCGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGAASAS*GCCARR
Trigger: CCTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGC...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTGCCTGTACTCCGCGGTaGCATCCGCCACGATGGCAT +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPAACTPR*HPPRWH
Trigger: ATGCCATCGTGGCGGATGGCACCGCGGAGTACAGGC...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTGAGCTTCGTCCCGGTTaGTGGAGGCCACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPAELRPG*WRPHWQ
Trigger: CTGCCAGTGTGGCCTCCACCAACCGGGACGAAGCTC...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR CAA 72 bp CCATCCGCCACGATGGCATCAAGCGGCGAGCGCTTCTaGCGGATGCTGCGCCCGGAGGAGATGAGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: PSATMASSGERF*RMLRPEEMRSA
Trigger: CGCGGACCTCATCTCCTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGCTTGATGCCATCGTGGCGGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTGCCGGGCTGGTCTCCTaGCCTCAAGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGAGLVS*PQVIHL
Trigger: CAGGTGGATCACTTGAGGTCAGGAGACCAGCCCGGC...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTCTGGTAGTCGGAAGGTaGCTCTCCATCCTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPALVVGR*LSILPY
Trigger: GTAGGGCAGGATGGAGAGGCACCTTCCGACTACCAG...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATGCGGCGAGCGCTTCTTaGGGATGCTGCGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDAASAS*GCCARR
Trigger: CCTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGC...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTATTGGAACTACCTGCTaGCGTTCGCTGGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGIGTTC*RSLGPG
Trigger: GCCGGGGCCCAGCGAACGCCAGCAGGTAGTTCCAAT...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648039.1
CDS-3UTR CCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTCTGGTCTCGAACTCCTaGCCTCAGGTGATCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPALVSNS*PQVISP
Trigger: AGGGGAGATCACCTGAGGCCAGGAGTTCGAGACCAG...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTCACCAGGTCTTTGATTaGAGTGACGCCCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPAHQVFD*SDAQHH
Trigger: GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTG...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTGGGGTTTCACCATGTTaGCCGGGCTGGTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGGVSPC*PGWSPD
Trigger: GTCAGGAGACCAGCCCGGCCAACATGGTGAAACCCC...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATGCGGCAGCAGATGACTaGGCTGCACTCGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDAAADD*AALAGQ
Trigger: CTGGCCTGCGAGTGCAGCGCAGTCATCTGCTGCCGC...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTCTGGTAGTCGGAAGGTaGCTCTCCATCCTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGLVVGR*LSILPY
Trigger: GTAGGGCAGGATGGAGAGGCACCTTCCGACTACCAG...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATACCTGCTGCCGTCGCTaGCACTGCTCCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDTCCRR*HCSSAF
Trigger: GAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGT...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp GCGAGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACAAGCTACCTGGCGTTCGCTaGGCCCCGGCTGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: ASHIVHQVFDCSDAQHHKLPGVR*APAGAS
Trigger: GGATGCCCCAGCCGGGGCCCAGCGAACGCCAGGTAG...CTTGTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR TCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATGGCCGAGCGCCGCGTTaGCACGCCCCGGCGGAACAC +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYGRAPR*HAPAEH
Trigger: GTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCC...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTCTCCCGGTTCTCCTCTaGTTCCCTGTTGACTCGGTT +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGLPVLL*FPVDSV
Trigger: AACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAG...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTCCGCCTTCAACCGCTTaGGATGCTTCTGGATCTTAT +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPAPPSTA*DASGSY
Trigger: ATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGG...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCGGGGTTTCACCATGTTaGCCGGGCTGGTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSGVSPC*PGWSPD
Trigger: GTCAGGAGACCAGCCCGGCCAACATGGTGAAACCCC...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTAGGCTGCCTGGTAGTTaGGCTGACCATCAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGRLPGS*ADHQSY
Trigger: ATAGGACTGATGGTCAGCTCAACTACCAGGCAGCCT...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGGCCGAGCGCCGCGTTaGCACGCCCCGGCGGAACAC +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFGRAPR*HAPAEH
Trigger: GTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTAATAAGCATGGCCGATaGCAAGACCAGCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPANKHGR*QDQQKA
Trigger: TGCTTTCTGCTGGTCTTGCCATCGGCCATGCTTATT...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTTTGACAGGAATCGAATaGCAACGACGGGTAGTAAGC +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPALTGIE*QRRVVS
Trigger: GCTTACTACCCGTCGTTGCCATTCGATTCCTGTCAA...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGCTGGTCTCGAACTCCTaGCCTCAGGTGATCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPLVSNS*PQVISP
Trigger: AGGGGAGATCACCTGAGGCCAGGAGTTCGAGACCAG...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTGGCAGGTCATACAGCTaGCTCCTGTTGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGGRSYS*LLLRKI
Trigger: TATCTTCCTCAACAGGAGTCAGCTGTATGACCTGCC...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATGGTCGAGCAGCCCCATaGGGAGCACGGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYGRAAP*GARAGW
Trigger: CCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACC...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATGGCCGAGCGCCGCGTTaGCACGCCCCGGCGGAACAC +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDGRAPR*HAPAEH
Trigger: GTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCC...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGTTCATCGGGAGAGGCTaGCTGGTAGTTGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPFIGRG*LVVELT
Trigger: GGTCAGCTCAACTACCAGGCAGCCTCTCCCGATGAA...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTTCAACAGCAGACCCCTaGTCATCAAGTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPASTADP*SSSSSS
Trigger: AGAAGATGAACTTGATGACCAGGGGTCTGCTGTTGA...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTCCTGCTGGCGTTCGCTaGGCCCCGGCTGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFPAGVR*APAGAS
Trigger: GGATGCCCCAGCCGGGGCCCAGCGAACGCCAGCAGG...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGTGGTGTTCTGGGTCCTaGCGAGGAAGGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPWCSGS*RGRQSQ
Trigger: TTGGCTTTGCCTTCCTCGCCAGGACCCAGAACACCA...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCTTGTTGTGGTTGTGTTaGGAGGCATCCCGATGGTCC +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSLLWLC*EASRWS
Trigger: GGACCATCGGGATGCCTCTCAACACAACCACAACAA...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTTGCGATCGTTTGCTTTaGCTTGCCATGTACATTCTT +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPACDRLL*LAMYIL
Trigger: AAGAATGTACATGGCAAGTCAAAGCAAACGATCGCA...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGCAGTCCTATCCACCATaGCTGTGTGGCAAACTGCGA +
Preference number: 4 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPQSYPP*LCGKLR
Trigger: TCGCAGTTTGCCACACAGTCATGGTGGATAGGACTG...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGAGCAGAGGCAATGGTaGCGGCAAAAGACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPEQRQW*RQKTGS
Trigger: ACTACCAGTCTTTTGCCGTCACCATTGCCTCTGCTC...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTTGCGCCCGGAGGAGATaGGGTCCGCGTAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFCARRR*GPRSPA
Trigger: AGCGGGGCTACGCGGACCTCATCTCCTCCGGGCGCA...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCGGTGGTTCTAGCTTTTaGGGGTGTGTCCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSGGSSF*GCVLLS
Trigger: GCTGAGAAGGACACACCCGCAAAAGCTAGAACCACC...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp GCAGTGACGCCCAGCACCACAAGCAGGGGCACTAGTGTGGTGTACCAAGCCAGGCACCAGGTCTTTGATTaGAGTGACGCCCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: AVTPSTTSRGTSVVYQARHQVFD*SDAQHH
Trigger: GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTG...CCTGGCTTGGTACACCACACTAGTGCCCCTGCTTGTGGTGCTGGGCGTCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTACATTCTTTTCTGAATaGCTCCCGGTTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGTFFSE*LPVLLC
Trigger: GCAGAGGAGAACCGGGAGCCATTCAGAAAAGAATGT...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGTATAGCCCCAGAAAATaGGGAATCCACGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPYSPRK*GIHGRR
Trigger: CCTCCTACCGTGGATTCCTCATTTTCTGGGGCTATA...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCTGGCCAGATGGTCATTaGCAGGAATCGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSWPDGH*QESNGN
Trigger: GTTGCCATTCGATTCCTGTCAATGACCATCTGGCCA...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATGAACCAATCCTCGTATaGAGTCTGCGCAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDEPILV*SLRRVA
Trigger: GGCTACTCTGCGCAGACTGCATACGAGGATTGGTTC...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTCGGCGGAACACCTGCTaGCGTCGCTGCCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFRRNTC*RRCHCS
Trigger: GGAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCG...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATATCAGCTGTCCCCGGTaGGCCTGTACTCCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYISCPR*ACTPRC
Trigger: GCACCGCGGAGTACAGGCGCACCGGGGACAGCTGAT...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCGACTCGGTTTTGTTCTaGTTCAACAGCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSDSVLF*FNSRPL
Trigger: CAGGGGTCTGCTGTTGAACCAGAACAAAACCGAGTC...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCCTGTCTCAGAGCGTTTaGAGCTGTGCCTGTAAATTG +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSLSQSV*SCACKL
Trigger: CAATTTACAGGCACAGCTTCAAACGCTCTGAGACAG...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTATGGAAACTAGTGTGTaGAAGACACAGAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPAMETSV*KTQNEK
Trigger: TTTCTCATTCTGTGTCTTTCACACACTAGTTTCCAT...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp ATGGCGAGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACCTCCCGGTTCTCCTCTaGTTCCCTGTTGACTCGGTT +
Preference number: 4 (lower is better)
Translates to: MASHIVHQVFDCSDAQHHLPVLL*FPVDSV
Trigger: AACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAG...GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCTCGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR GCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTTCTAAGAGTTTCATTTaGAAAGATATCCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPASKSFI*KDIQGI
Trigger: GATGCCCTGGATATCTTTGCAAATGAAACTCTTAGA...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCAGGAGGTGCAAACTTTaGGTAGACGCCACCTCTATT +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSRRCKL*VDATSI
Trigger: AATAGAGGTGGCGTCTACGCAAAGTTTGCACCTCCT...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGCGGCAGCAGATGACTaGGCTGCACTCGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFAAADD*AALAGQ
Trigger: CTGGCCTGCGAGTGCAGCGCAGTCATCTGCTGCCGC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATACCACCATGGCCTTCTaGTTGGGGGTGACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYTTMAF*LGVTRQ
Trigger: CTGCCGCGTCACCCCCAAGCAGAAGGCCATGGTGGT...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATCGGCGGAACACCTGCTaGCGTCGCTGCCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDRRNTC*RRCHCS
Trigger: GGAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCG...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTAAAATGACTAAGCCGTaGCAGAAATCGGTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGKMTKP*QKSVFL
Trigger: TAGGAACACCGATTTCTGCCACGGCTTAGTCATTTT...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATCTTCGTCCCGGTTGGTaGAGGCCACACTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYLRPGW*RPHWQP
Trigger: TGGCTGCCAGTGTGGCCTCCACCAACCGGGACGAAG...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATGCCAGGGTAGAGATTTaGGGAACTGCCTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDARVEI*GTACKI
Trigger: TATCTTACAGGCAGTTCCTCAAATCTCTACCCTGGC...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTGCTGCTCTCTTAAACTaGTCAAACAGATTCATTGGT +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGAALLN*SNRFIG
Trigger: ACCAATGAATCTGTTTGAGCAGTTTAAGAGAGCAGC...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATAGGAGGTGCAAACTTTaGGTAGACGCCACCTCTATT +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDRRCKL*VDATSI
Trigger: AATAGAGGTGGCGTCTACGCAAAGTTTGCACCTCCT...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGTCAACAGCAGACCCCTaGTCATCAAGTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPSTADP*SSSSSS
Trigger: AGAAGATGAACTTGATGACCAGGGGTCTGCTGTTGA...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATTCCTTATCCATTTTATaGCGAGCCACATCGTCCACC +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDSLSIL*RATSST
Trigger: GGTGGACGATGTGGCTCGCCATAAAATGGATAAGGA...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCCCCATAGCAGATGGTaGTGTCTTCAGTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDPHSRW*CLQSEV
Trigger: AACTTCTGACTGAAGACACCACCATCTGCTATGGGG...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATTTGACAGGAATCGAATaGCAACGACGGGTAGTAAGC +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDLTGIE*QRRVVS
Trigger: GCTTACTACCCGTCGTTGCCATTCGATTCCTGTCAA...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTAATCTGTTAATAAGATaGCCTATAGGGAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: ARRRRPSAALTRPGGTPANLLIR*PIGRKK
Trigger: CTTTTTCCTCCCTATAGGCCATCTTATTAACAGATT...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR CAA 72 bp TGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTaGCGATGCTTCTGGATCTTATCACTTTCTGATGGC +
Preference number: 4 (lower is better)
Translates to: CRRCHCSSAFNR*RCFWILSLSDG
Trigger: GCCATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp GTTCCTGGCAGCGTTTACCAGGGCACCTTCATCGGGAGAGGCTGCCTGGTAGTTCCTCTGCTTCCCTGTTaGCTCGGTTTTGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VPGSVYQGTFIGRGCLVVPLLPC*LGFVLV
Trigger: AACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGG...AACTACCAGGCAGCCTCTCCCGATGAAGGTGCCCTGGTAAACGCTGCCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp GCAGTGACGCCCAGCACCACAAGCAGGGGCACTAGTGTGGTGTACCAAGCCAGGTGCATTATTCTTTTCTaGATGGCTCCCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AVTPSTTSRGTSVVYQARCIILF*MAPGSP
Trigger: AGGAGAACCGGGAGCCATTCAGAAAAGAATAATGCA...CCTGGCTTGGTACACCACACTAGTGCCCCTGCTTGTGGTGCTGGGCGTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR TCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCCTTTACAGTAAAGCTTaGTATTGCCTTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSLYSKA*YCLLGF
Trigger: GAACCCCAGAAGGCAATATCAAGCTTTACTGTAAAG...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGTGCGCCCGGAGGAGATaGGGTCCGCGTAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKCARRR*GPRSPA
Trigger: AGCGGGGCTACGCGGACCTCATCTCCTCCGGGCGCA...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCTCTATTGCCCTGGATTaGGACTGGATTAAAACGTTC +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSSIALD*DWIKTF
Trigger: GAACGTTTTAATCCAGTCTCAATCCAGGGCAATAGA...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTTCTAAGAGTTTCATTTaGAAAGATATCCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGSKSFI*KDIQGI
Trigger: GATGCCCTGGATATCTTTGCAAATGAAACTCTTAGA...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp GCAGTGACGCCCAGCACCACAAGCAGGGGCACTAGTGTGGTGTACCAAGCCAGGTTATTCTTTTCTGAATaGCTCCCGGTTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AVTPSTTSRGTSVVYQARLFFSE*LPVLLC
Trigger: GCAGAGGAGAACCGGGAGCCATTCAGAAAAGAATAA...CCTGGCTTGGTACACCACACTAGTGCCCCTGCTTGTGGTGCTGGGCGTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATCTTCGTCCCGGTTGGTaGAGGCCACACTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDLRPGW*RPHWQP
Trigger: TGGCTGCCAGTGTGGCCTCCACCAACCGGGACGAAG...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATTGCCATCCGCCACGATaGCATCAAGCGGCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDCHPPR*HQAASA
Trigger: AGCGCTCGCCGCTTGATGCCATCGTGGCGGATGGCA...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR CAA 72 bp CCCACTATGTATAACCCAGGGAATCGGAGGCTCAGTTaGTCACTCACATCCTGGTCGAGCAGCCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: PTMYNPGNRRLS*SLTSWSSSPMR
Trigger: CCTCATGGGGCTGCTCGACCAGGATGTGAGTGACAAACTGAGCCTCCGATTCCCTGGGTTATACATAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGTTTGTGTTCATAAAGTaGGGTTGTTCGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPFVFIK*GCSWYL
Trigger: CAAGTACCACGAACAACCTCACTTTATGAACACAAA...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCAAGGAGTACCAGAAATaGACCAAAGTAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSKEYQK*TKVKAK
Trigger: CTTTGCCTTTACTTTGGTTCATTTCTGGTACTCCTT...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCTCTGGGAAATTATGCTaGAGATCACCGAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSSGKLC*RSPKGK
Trigger: TTTTCCTTTCGGTGATCTTCAGCATAATTTCCCAGA...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCGATGTTAGGACCCCATaGAACAAGCTTACAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSDVRTP*NKLTKN
Trigger: ATTCTTTGTAAGCTTGTTGCATGGGGTCCTAACATC...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTCCCCGGCGGAACACCTaGTGCCGTCGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFPRRNT*CRRCHC
Trigger: GCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGG...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp GTTCCTGGCAGCGTTTACCAGGGCACCTTCATCGGGAGAGGCTGCCTGGTAGTTAATAAGCATGGCCGATaGCAAGACCAGCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VPGSVYQGTFIGRGCLVVNKHGR*QDQQKA
Trigger: TGCTTTCTGCTGGTCTTGCCATCGGCCATGCTTATT...AACTACCAGGCAGCCTCTCCCGATGAAGGTGCCCTGGTAAACGCTGCCAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGGAGCACGGGCAGGCTaGTGTACAGCACGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFGARAG*CTARCR
Trigger: TCTACAACGTGCTGTACACCAGCCTGCCCGTGCTCC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACAAGCAGGCCAGGGTAGAGATTTaGGGAACTGCCTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: SHIVHQVFDCSDAQHHKQARVEI*GTACKI
Trigger: TATCTTACAGGCAGTTCCTCAAATCTCTACCCTGGC...CTGCTTGTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR TCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTCTCCGATGGCCAGCGTaGTGGCTTTCTTGTACCTCT +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFLRWPA*WLSCTS
Trigger: AGAGGTACAAGAAAGCCATCACGCTGGCCATCGGAG...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATGGTGGTTCTAGCTTTTaGGGGTGTGTCCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYGGSSF*GCVLLS
Trigger: GCTGAGAAGGACACACCCGCAAAAGCTAGAACCACC...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp GCAGTGACGCCCAGCACCACAAGCAGGGGCACTAGTGTGGTGTACCAAGCCAGGTTTCTGTACTCATTCTaGTGGCAAATTGGAACTACC +
Preference number: 4 (lower is better)
Translates to: AVTPSTTSRGTSVVYQARFLYSF*WQIGTT
Trigger: GGTAGTTCCAATTTGCCAGCAGAATGAGTACAGAAA...CCTGGCTTGGTACACCACACTAGTGCCCCTGCTTGTGGTGCTGGGCGTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR GCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATGGAATTGCCCACCTGTaGTTCCCAATAAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYGIAHL*FPISMA
Trigger: GGCCATGCTTATTGGGAAGCACAGGTGGGCAATTCC...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGTGCCGTCGCTGCCACTaGTCCTCCGCCTTCAACCGC +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKCRRCH*SSAFNR
Trigger: GCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCA...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTTTCCTGCACAGGAGGTaGAAACTTTGCGTAGACGCC +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFFLHRR*KLCVDA
Trigger: GGCGTCTACGCAAAGTTTGCACCTCCTGTGCAGGAA...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACCGGCGGAACACCTGCTaGCGTCGCTGCCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYRRNTC*RRCHCS
Trigger: GGAGCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCG...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCTGCAGCCGCCCTTTTaGCTCCGCTCCGCCGGACCG +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCLQPPF*LRSAGP
Trigger: CGGTCCGGCGGAGCGGAGGCAAAAGGGCGGCTGCAG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS-3UTR CCA 90 bp AGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACAAGCAGTCAACAGCAGACCCCTaGTCATCAAGTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SHIVHQVFDCSDAQHHKQSTADP*SSSSSS
Trigger: AGAAGATGAACTTGATGACCAGGGGTCTGCTGTTGA...CTGCTTGTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR TCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATTTGTTGTGGTTGTGTTaGGAGGCATCCCGATGGTCC +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDLLWLC*EASRWS
Trigger: GGACCATCGGGATGCCTCTCAACACAACCACAACAA...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTCCTCTGCTTCCCTGTTaGCTCGGTTTTGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFPLLPC*LGFVLV
Trigger: AACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGG...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAAGGTCGAGCAGCCCCATaGGGAGCACGGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKGRAAP*GARAGW
Trigger: CCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACC...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATGAGCAGAGGCAATGGTaGCGGCAAAAGACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDEQRQW*RQKTGS
Trigger: ACTACCAGTCTTTTGCCGTCACCATTGCCTCTGCTC...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp ATGGCGAGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACGCTGCTCTCTTAAACTaGTCAAACAGATTCATTGGT +
Preference number: 4 (lower is better)
Translates to: MASHIVHQVFDCSDAQHHAALLN*SNRFIG
Trigger: ACCAATGAATCTGTTTGAGCAGTTTAAGAGAGCAGC...GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCTCGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR GCA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCCACCAGGTCTTTGATTaGAGTGACGCCCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSHQVFD*SDAQHH
Trigger: GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTG...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTGGTTTTCCATCCTTaGATGAAGAAGAGAATTAAT +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDLVFHP*MKKRIN
Trigger: ATTAATTCTCTTCTTCATGCAAGGATGGAAAACCAG...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCACCTGCTGCCGTCGCTaGCACTGCTCCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITTCCRR*HCSSAF
Trigger: GAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGCCTGTACTCCGCGGTaGCATCCGCCACGATGGCAT +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFACTPR*HPPRWH
Trigger: ATGCCATCGTGGCGGATGGCACCGCGGAGTACAGGC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCATCAGCTGTCCCCGGTaGGCCTGTACTCCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITISCPR*ACTPRC
Trigger: GCACCGCGGAGTACAGGCGCACCGGGGACAGCTGAT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTCCCGCCCCGCGTCCGTaGACCCTTCCTCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTPAPRP*TLPLQP
Trigger: CGGCTGCAGAGGAAGGGTGCACGGACGCGGGGCGGG...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS-3UTR CCA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCTGGTGTTCTGGGTCCTaGCGAGGAAGGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSWCSGS*RGRQSQ
Trigger: TTGGCTTTGCCTTCCTCGCCAGGACCCAGAACACCA...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATTCATGTTCACGTCATTaGCCCCATCTCCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDSCSRH*PHLRWP
Trigger: TGGCCATCGGAGATGGGGCCAATGACGTGAACATGA...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATGTAATTCTATTGCCCTaGATTGAGACTGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDVILLP*IETGLK
Trigger: TTTTAATCCAGTCTCAATCCAGGGCAATAGAATTAC...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGCCAGGGTAGAGATTTaGGGAACTGCCTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFARVEI*GTACKI
Trigger: TATCTTACAGGCAGTTCCTCAAATCTCTACCCTGGC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGCTTCCGGTCACTGTTaGAGTCCAAAATGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFASGHC*SPKWQE
Trigger: TTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGGTCGAGCAGCCCCATaGGGAGCACGGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALGRAAP*GARAGW
Trigger: CCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCACTCCTGGCCTCAGGTaGTCTCCCCTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITTPGLR*SPLLSL
Trigger: GAGGCTGAGGAGGGGAGATCACCTGAGGCCAGGAGT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCGGTGGTTCTAGCTTTTaGGGGTGTGTCCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSGGSSF*GCVLLS
Trigger: GCTGAGAAGGACACACCCGCAAAAGCTAGAACCACC...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATCTCGACATGACAGCTTaGATTCCTTCTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYLDMTA*IPSCPL
Trigger: AAGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAG...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTCCCCGGCGGAACACCTaGTGCCGTCGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTPRRNT*CRRCHC
Trigger: GCAGTGGCAGCGACGGCAGCAGGTGTTCCGCCGGGG...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATTGGAACTACCTGCTaGCGTTCGCTGGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYIGTTC*RSLGPG
Trigger: GCCGGGGCCCAGCGAACGCCAGCAGGTAGTTCCAAT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAATAAGCATGGCCGATaGCAAGACCAGCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFNKHGR*QDQQKA
Trigger: TGCTTTCTGCTGGTCTTGCCATCGGCCATGCTTATT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACGAGCTTCGTCCCGGTTaGTGGAGGCCACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYELRPG*WRPHWQ
Trigger: CTGCCAGTGTGGCCTCCACCAACCGGGACGAAGCTC...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACTGCCATCCGCCACGATaGCATCAAGCGGCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYCHPPR*HQAASA
Trigger: AGCGCTCGCCGCTTGATGCCATCGTGGCGGATGGCA...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGCTCCGATGGCCAGCGTaGTGGCTTTCTTGTACCTCT +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKLRWPA*WLSCTS
Trigger: AGAGGTACAAGAAAGCCATCACGCTGGCCATCGGAG...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATCTGTCTCAGAGCGTTTaGAGCTGTGCCTGTAAATTG +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDLSQSV*SCACKL
Trigger: CAATTTACAGGCACAGCTTCAAACGCTCTGAGACAG...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTTTCTCCATCCAGTTCTaGTGTTTCCACATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFFSIQF*CFHIAE
Trigger: CTCTGCTATGTGGAAACAGCAGAACTGGATGGAGAA...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAAGCGGCAGCAGATGACTaGGCTGCACTCGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKAAADD*AALAGQ
Trigger: CTGGCCTGCGAGTGCAGCGCAGTCATCTGCTGCCGC...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATTTCAACCGCTTGCGATaGTTCTGGATCTTATCACTT +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYFNRLR*FWILSL
Trigger: AAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAA...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAAACCTGCTGCCGTCGCTaGCACTGCTCCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKTCCRR*HCSSAF
Trigger: GAAGGCGGAGGAGCAGTGGCAGCGACGGCAGCAGGT...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCGTGCACCCTTCCTCTaGAGCCGCCCTTTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCRAPFL*SRPFAS
Trigger: GGAGGCAAAAGGGCGGCTGCAGAGGAAGGGTGCACG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS-3UTR CCA 90 bp GGAACTGCCTGTAAGATAAGAAGAGCCAGGAAATATAAATTGGCTGCTCTCTTACAAATTGGAACTACCTaGCGTTCGCTGGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GTACKIRRARKYKLAALLQIGTT*RSLGPG
Trigger: GCCGGGGCCCAGCGAACGCCAGGTAGTTCCAATTTG...TAAGAGAGCAGCCAATTTATATTTCCTGGCTCTTCTTATCTTACAGGCAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATTCCTTATCCATTTTATaGCGAGCCACATCGTCCACC +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDSLSIL*RATSST
Trigger: GGTGGACGATGTGGCTCGCCATAAAATGGATAAGGA...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATACATTCTTTTCTGAATaGCTCCCGGTTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDTFFSE*LPVLLC
Trigger: GCAGAGGAGAACCGGGAGCCATTCAGAAAAGAATGT...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGTGGTGTTCTGGGTCCTaGCGAGGAAGGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKWCSGS*RGRQSQ
Trigger: TTGGCTTTGCCTTCCTCGCCAGGACCCAGAACACCA...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCTTCGTCCCGGTTGGTaGAGGCCACACTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCLRPGW*RPHWQP
Trigger: TGGCTGCCAGTGTGGCCTCCACCAACCGGGACGAAG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATAGCCTCCTTTTACTTTaGGTCCGCATCCGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDSLLLL*VRIRLS
Trigger: AGAAAGACGGATGCGGACCCAAAGTAAAAGGAGGCT...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTAATAGACGTGCTTTGTaGCCGCATCCCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFNRRAL*PHPSLG
Trigger: CCCCAGGCTGGGATGCGGCCACAAAGCACGTCTATT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGGAAAAAGGGGCCTCTaGGAAATTATGCTGAAGATC +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFGKRGL*EIMLKI
Trigger: GATCTTCAGCATAATTTCCCAGAGGCCCCTTTTTCC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATCCAGTCTTAGGAATGTaGCTGCCAATAACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYPVLGM*LPITFS
Trigger: AGAAAAGGTTATTGGCAGCCACATTCCTAAGACTGG...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATTGTATTCCAGCACTATaGAAGTCAAACATGATGCCA +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYCIPAL*KSNMMP
Trigger: TGGCATCATGTTTGACTTTCATAGTGCTGGAATACA...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAAGCCGGGCTGGTCTCCTaGCCTCAAGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKAGLVS*PQVIHL
Trigger: CAGGTGGATCACTTGAGGTCAGGAGACCAGCCCGGC...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp TTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAGGCTGCCTGGTAGTTaGGCTGACCTAACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FWGSYNDRHSLPVTVEVQRLPGS*ADLTRK
Trigger: CTTCCTTGTTAGGTCAGCTCAACTACCAGGCAGCCT...TTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTCTCCCGGTTCTCCTCTaGTTCCCTGTTGACTCGGTT +
Preference number: 4 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSLPVLL*FPVDSV
Trigger: AACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAG...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTTTCATCGGGAGAGGCTaGCTGGTAGTTGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFFIGRG*LVVELT
Trigger: GGTCAGCTCAACTACCAGGCAGCCTCTCCCGATGAA...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTTTCATCGGGAGAGGCTaGCTGGTAGTTGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSFIGRG*LVVELT
Trigger: GGTCAGCTCAACTACCAGGCAGCCTCTCCCGATGAA...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTGCCGTCGCTGCCACTaGTCCTCCGCCTTCAACCGC +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALCRRCH*SSAFNR
Trigger: GCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTGCCGTCGCTGCCACTaGTCCTCCGCCTTCAACCGC +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTCRRCH*SSAFNR
Trigger: GCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGAGTCCTCCTTACTTCTaGGTGTCAATCCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKSPPYF*VSIPLP
Trigger: GGGAAGGGGGATTGACACGCAGAAGTAAGGAGGACT...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642462.1
CDS-3UTR CCA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCACATTCTTTTCTGAATaGCTCCCGGTTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSTFFSE*LPVLLC
Trigger: GCAGAGGAGAACCGGGAGCCATTCAGAAAAGAATGT...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTTGGTGTTCTGGGTCCTaGCGAGGAAGGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFWCSGS*RGRQSQ
Trigger: TTGGCTTTGCCTTCCTCGCCAGGACCCAGAACACCA...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTATGGTGATGGTGTTCTaGGTCCTGGCGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFMVMVF*VLARKA
Trigger: TGCCTTCCTCGCCAGGACCCAGAACACCATCACCAT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAAGAGCTTCGTCCCGGTTaGTGGAGGCCACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKELRPG*WRPHWQ
Trigger: CTGCCAGTGTGGCCTCCACCAACCGGGACGAAGCTC...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACGGAGCACGGGCAGGCTaGTGTACAGCACGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYGARAG*CTARCR
Trigger: TCTACAACGTGCTGTACACCAGCCTGCCCGTGCTCC...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTCGCTTGCGATGCTTCTaGATCTTATCACTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFRLRCF*ILSLSD
Trigger: ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCG...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCTGGTCTCGAACTCCTaGCCTCAGGTGATCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITLVSNS*PQVISP
Trigger: AGGGGAGATCACCTGAGGCCAGGAGTTCGAGACCAG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCCGGACCGGCCAAACTaGTTTCTCCGCTCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALPDRPN*FLRSGR
Trigger: CCTCCCCGAGCGGAGAAACCAGTTTGGCCGGTCCGG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS-3UTR CCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTGGAAGCGTGTCTAGTTaGCGGCGGCACCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTGSVSS*RRHLRL
Trigger: GAGCCGGAGGTGCCGCCGCCAACTAGACACGCTTCC...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS-3UTR TCA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTTTGTTGTGGTTGTGTTaGGAGGCATCCCGATGGTCC +
Preference number: 4 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSLLWLC*EASRWS
Trigger: GGACCATCGGGATGCCTCTCAACACAACCACAACAA...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAAGGAGTACCAGAAATaGACCAAAGTAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFKEYQK*TKVKAK
Trigger: CTTTGCCTTTACTTTGGTTCATTTCTGGTACTCCTT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTGCCGGGCTGGTCTCCTaGCCTCAAGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTAGLVS*PQVIHL
Trigger: CAGGTGGATCACTTGAGGTCAGGAGACCAGCCCGGC...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCACCAGGTCTTTGATTaGAGTGACGCCCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITHQVFD*SDAQHH
Trigger: GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACCACCAGGTCTTTGATTaGAGTGACGCCCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYHQVFD*SDAQHH
Trigger: GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTG...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTGGAATTGCCCACCTGTaGTTCCCAATAAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSGIAHL*FPISMA
Trigger: GGCCATGCTTATTGGGAAGCACAGGTGGGCAATTCC...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp TTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAGGTACCAAGAGGAATTaGCCACCTGTGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: FWGSYNDRHSLPVTVEVQGTKRN*PPVLPN
Trigger: ATTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACC...TTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACTTCATCGGGAGAGGCTaGCTGGTAGTTGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYFIGRG*LVVELT
Trigger: GGTCAGCTCAACTACCAGGCAGCCTCTCCCGATGAA...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTACCACCATGGCCTTCTaGTTGGGGGTGACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTTTMAF*LGVTRQ
Trigger: CTGCCGCGTCACCCCCAAGCAGAAGGCCATGGTGGT...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAGTATCGTAGGAACTTaGACATCCTTATGTAAGACC +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFSIVGT*TSLCKT
Trigger: GGTCTTACATAAGGATGTGCAAGTTCCTACGATACT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGATGTTAGGACCCCATaGAACAAGCTTACAAAGAAT +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFDVRTP*NKLTKN
Trigger: ATTCTTTGTAAGCTTGTTGCATGGGGTCCTAACATC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCTGGTAGTCGGAAGGTaGCTCTCCATCCTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCLVVGR*LSILPY
Trigger: GTAGGGCAGGATGGAGAGGCACCTTCCGACTACCAG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGCCTGTACTCCGCGGTaGCATCCGCCACGATGGCAT +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALACTPR*HPPRWH
Trigger: ATGCCATCGTGGCGGATGGCACCGCGGAGTACAGGC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTTTCAAGCGATTCTTCTaGTTCAGCTTCTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFFKRFF*FSFSNR
Trigger: CCTATTTGAGAAGCTGAAGCAGAAGAATCGCTTGAA...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAGACTCGGTTTTGTTCTaGTTCAACAGCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: FWGSYNDRHSLPVTVEVQDSVLF*FNSRPL
Trigger: CAGGGGTCTGCTGTTGAACCAGAACAAAACCGAGTC...TTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCATGGTGATGGTGTTCTaGGTCCTGGCGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITMVMVF*VLARKA
Trigger: TGCCTTCCTCGCCAGGACCCAGAACACCATCACCAT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGATTCCAACGCCAATGTaGGCAGGTCATACAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKIPTPM*AGHTAD
Trigger: GTCAGCTGTATGACCTGCCCACATTGGCGTTGGAAT...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACTTGTCACTCACATCCTaGTCGAGCAGCCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYLSLTS*SSSPMR
Trigger: CCTCATGGGGCTGCTCGACCAGGATGTGAGTGACAA...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATTTTCTGATGGCCAGATaGTCATTGACAGGAATCGAA +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDFLMAR*SLTGIE
Trigger: TTCGATTCCTGTCAATGACCATCTGGCCATCAGAAA...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTGCCATCCGCCACGATaGCATCAAGCGGCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALCHPPR*HQAASA
Trigger: AGCGCTCGCCGCTTGATGCCATCGTGGCGGATGGCA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTAATAGACGTGCTTTGTaGCCGCATCCCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCNRRAL*PHPSLG
Trigger: CCCCAGGCTGGGATGCGGCCACAAAGCACGTCTATT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTCTCTGTTGCTCAGGTTaGAGTGCAGTGCCACGATCT +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFLCCSG*SAVPRS
Trigger: AGATCGTGGCACTGCACTCCAACCTGAGCAACAGAG...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATCCAGTCTTAGGAATGTaGCTGCCAATAACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDPVLGM*LPITFS
Trigger: AGAAAAGGTTATTGGCAGCCACATTCCTAAGACTGG...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
3UTR CAA 72 bp TCTGGATCTTATCACTTTCTGATGGCCAGATGGTCATaGACAGGAATCGAATGGCAACGACGGGTAGTAAGC +
Preference number: 4 (lower is better)
Translates to: SGSYHFLMARWS*TGIEWQRRVVS
Trigger: GCTTACTACCCGTCGTTGCCATTCGATTCCTGTCAATGACCATCTGGCCATCAGAAAGTGATAAGATCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGGCCAGGGTAGAGATTTaGGGAACTGCCTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKARVEI*GTACKI
Trigger: TATCTTACAGGCAGTTCCTCAAATCTCTACCCTGGC...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTTATAGCCCCAGAAAATaGGGAATCCACGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFYSPRK*GIHGRR
Trigger: CCTCCTACCGTGGATTCCTCATTTTCTGGGGCTATA...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCAGTCCTATCCACCATaGCTGTGTGGCAAACTGCGA +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITQSYPP*LCGKLR
Trigger: TCGCAGTTTGCCACACAGTCATGGTGGATAGGACTG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTCAGTCCTATCCACCATaGCTGTGTGGCAAACTGCGA +
Preference number: 4 (lower is better)
Translates to: NDRHSLPVTVEVQNGKNIQSYPP*LCGKLR
Trigger: TCGCAGTTTGCCACACAGTCATGGTGGATAGGACTG...AATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGGCTTCCGGTCACTGTTaGAGTCCAAAATGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKASGHC*SPKWQE
Trigger: TTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGC...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCCTTTACAGTAAAGCTTaGTATTGCCTTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSLYSKA*YCLLGF
Trigger: GAACCCCAGAAGGCAATATCAAGCTTTACTGTAAAG...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCTCCGATGGCCAGCGTaGTGGCTTTCTTGTACCTCT +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCLRWPA*WLSCTS
Trigger: AGAGGTACAAGAAAGCCATCACGCTGGCCATCGGAG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATGGAATTCAACAGGACTaGTATTGTGAACATTCACAG +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDGIQQD*YCEHSQ
Trigger: CTGTGAATGTTCACAATATCAGTCCTGTTGAATTCC...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTCCAACAGTATGTCTTTaGCACATTTGCATTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFPTVCL*HICIVN
Trigger: ATTGACAATGCAAATGTGTCAAAGACATACTGTTGG...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACGGTGGTTCTAGCTTTTaGGGGTGTGTCCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYGGSSF*GCVLLS
Trigger: GCTGAGAAGGACACACCCGCAAAAGCTAGAACCACC...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCTCCCGGTTCTCCTCTaGTTCCCTGTTGACTCGGTT +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCLPVLL*FPVDSV
Trigger: AACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCGGAATTGCCCACCTGTaGTTCCCAATAAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITGIAHL*FPISMA
Trigger: GGCCATGCTTATTGGGAAGCACAGGTGGGCAATTCC...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGGTACCAAGAGGAATTaGCCACCTGTGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFGTKRN*PPVLPN
Trigger: ATTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATCCTATTTCTTGGCTCTaGTATTGTTTAATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: GRCLSILPYGLQISSKRYPISWL*YCLIVQ
Trigger: TTGGACTATTAAACAATAGCAGAGCCAAGAAATAGG...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGCAGGCACAAAAGTTTaGTTTCCAAAAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFAGTKV*FPKESF
Trigger: AAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGACTCGGTTTTGTTCTaGTTCAACAGCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFDSVLF*FNSRPL
Trigger: CAGGGGTCTGCTGTTGAACCAGAACAAAACCGAGTC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAATGTATCTTCTCTTTaGAGGTACTGGTCTGTGATT +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFNVSSL*RYWSVI
Trigger: AATCACAGACCAGTACCTCCAAAGAGAAGATACATT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTATGGTGATGGTGTTCTaGGTCCTGGCGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCMVMVF*VLARKA
Trigger: TGCCTTCCTCGCCAGGACCCAGAACACCATCACCAT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCTCATGTTCACGTCATTaGCCCCATCTCCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITSCSRH*PHLRWP
Trigger: TGGCCATCGGAGATGGGGCCAATGACGTGAACATGA...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTTTGTCACTCACATCCTaGTCGAGCAGCCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCLSLTS*SSSPMR
Trigger: CCTCATGGGGCTGCTCGACCAGGATGTGAGTGACAA...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCTCTGTTGCTCAGGTTaGAGTGCAGTGCCACGATCT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITLCCSG*SAVPRS
Trigger: AGATCGTGGCACTGCACTCCAACCTGAGCAACAGAG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACCTCTGTTGCTCAGGTTaGAGTGCAGTGCCACGATCT +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYLCCSG*SAVPRS
Trigger: AGATCGTGGCACTGCACTCCAACCTGAGCAACAGAG...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp GGAACTGCCTGTAAGATAAGAAGAGCCAGGAAATATAAATTGGCTGCTCTCTTACCTCTGCTTCCCTGTTaGCTCGGTTTTGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GTACKIRRARKYKLAALLPLLPC*LGFVLV
Trigger: AACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGG...TAAGAGAGCAGCCAATTTATATTTCCTGGCTCTTCTTATCTTACAGGCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR TCA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGTATAGCCCCAGAAAATaGGGAATCCACGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: KSFICKDIQGILCFLLSRYSPRK*GIHGRR
Trigger: CCTCCTACCGTGGATTCCTCATTTTCTGGGGCTATA...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGAGGAGGAGGAGATTTTaGTCATGTTCACGTCATTGG +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKRRRRF*SCSRHW
Trigger: CCAATGACGTGAACATGATCAAAATCTCCTCCTCCT...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCTGGCCAGATGGTCATTaGCAGGAATCGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITWPDGH*QESNGN
Trigger: GTTGCCATTCGATTCCTGTCAATGACCATCTGGCCA...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGTTCTCCATCCAGTTCTaGTGTTTCCACATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKFSIQF*CFHIAE
Trigger: CTCTGCTATGTGGAAACAGCAGAACTGGATGGAGAA...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp TTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAATTCTCCATCCAGTTCTaGTGTTTCCACATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FWGSYNDRHSLPVTVEVQFSIQF*CFHIAE
Trigger: CTCTGCTATGTGGAAACAGCAGAACTGGATGGAGAA...TTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTAGGAGGTGCAAACTTTaGGTAGACGCCACCTCTATT +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFRRCKL*VDATSI
Trigger: AATAGAGGTGGCGTCTACGCAAAGTTTGCACCTCCT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACCCGCCTTCAACCGCTTaGGATGCTTCTGGATCTTAT +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYPPSTA*DASGSY
Trigger: ATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGG...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGGAAACATGAAACCATaGAATCTACTATCAACTTTG +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFGNMKP*NLLSTL
Trigger: CAAAGTTGATAGTAGATTGCATGGTTTCATGTTTCC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAGAGATTTGAGGAACTaGCGCATATTTACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSRDLRN*RIFTLL
Trigger: AAGGAGAGTAAATATGCGGCAGTTCCTCAAATCTCT...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CCA 90 bp GGAACTGCCTGTAAGATAAGAAGAGCCAGGAAATATAAATTGGCTGCTCTCTTAGACTCGGTTTTGTTCTaGTTCAACAGCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: GTACKIRRARKYKLAALLDSVLF*FNSRPL
Trigger: CAGGGGTCTGCTGTTGAACCAGAACAAAACCGAGTC...TAAGAGAGCAGCCAATTTATATTTCCTGGCTCTTCTTATCTTACAGGCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACGACTCGGTTTTGTTCTaGTTCAACAGCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYDSVLF*FNSRPL
Trigger: CAGGGGTCTGCTGTTGAACCAGAACAAAACCGAGTC...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTTCCTTATCCATTTTATaGCGAGCCACATCGTCCACC +
Preference number: 4 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSSLSIL*RATSST
Trigger: GGTGGACGATGTGGCTCGCCATAAAATGGATAAGGA...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAATAGACGTGCTTTGTaGCCGCATCCCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALNRRAL*PHPSLG
Trigger: CCCCAGGCTGGGATGCGGCCACAAAGCACGTCTATT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCAGCTTCTCAAATAGGTaGGATTACGGGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITSFSNR*DYGCPP
Trigger: TGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAATCTGTTAATAAGATaGCCTATAGGGAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFNLLIR*PIGRKK
Trigger: CTTTTTCCTCCCTATAGGCCATCTTATTAACAGATT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAGAATTCTCGAACTATaGAAACTAGTGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFRILEL*KLVCER
Trigger: TCTTTCACACACTAGTTTCCATAGTTCGAGAATTCT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGTGCGATCGTTTGCTTTaGCTTGCCATGTACATTCTT +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKCDRLL*LAMYIL
Trigger: AAGAATGTACATGGCAAGTCAAAGCAAACGATCGCA...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGCAGCACCTGCAAAAATaGCTAAGCCGTGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KSFICKDIQGILCFLLSRQHLQK*LSRGRN
Trigger: ATTTCTGCCACGGCTTAGTCATTTTTGCAGGTGCTG...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCAGCACCTGCAAAAATaGCTAAGCCGTGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITQHLQK*LSRGRN
Trigger: ATTTCTGCCACGGCTTAGTCATTTTTGCAGGTGCTG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGCTTCCGGTCACTGTTaGAGTCCAAAATGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: NDRHSLPVTVEVQNGKNIASGHC*SPKWQE
Trigger: TTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGC...AATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGCTTTACAGTAAAGCTTaGTATTGCCTTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKLYSKA*YCLLGF
Trigger: GAACCCCAGAAGGCAATATCAAGCTTTACTGTAAAG...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCTGTCTCAGAGCGTTTaGAGCTGTGCCTGTAAATTG +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITLSQSV*SCACKL
Trigger: CAATTTACAGGCACAGCTTCAAACGCTCTGAGACAG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTTGGCCAGATGGTCATTaGCAGGAATCGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCWPDGH*QESNGN
Trigger: GTTGCCATTCGATTCCTGTCAATGACCATCTGGCCA...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGCCAGGGTAGAGATTTaGGGAACTGCCGCATATTTA +
Preference number: 4 (lower is better)
Translates to: NDRHSLPVTVEVQNGKNIARVEI*GTAAYL
Trigger: TAAATATGCGGCAGTTCCTCAAATCTCTACCCTGGC...AATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTCTCCCGGTTCTCCTCTaGTTCCCTGTTGACTCGGTT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTLPVLL*FPVDSV
Trigger: AACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAG...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAATTCCTGCACAGGAGGTaGAAACTTTGCGTAGACGCC +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKFLHRR*KLCVDA
Trigger: GGCGTCTACGCAAAGTTTGCACCTCCTGTGCAGGAA...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCCGCCTTCAACCGCTTaGGATGCTTCTGGATCTTAT +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCPPSTA*DASGSY
Trigger: ATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATGGAAACATGAAACCATaGAATCTACTATCAACTTTG +
Preference number: 4 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDGNMKP*NLLSTL
Trigger: CAAAGTTGATAGTAGATTGCATGGTTTCATGTTTCC...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCCCCATAGCAGATGGTaGTGTCTTCAGTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITPHSRW*CLQSEV
Trigger: AACTTCTGACTGAAGACACCACCATCTGCTATGGGG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCAGCCTCCTTTTACTTTaGGTCCGCATCCGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITSLLLL*VRIRLS
Trigger: AGAAAGACGGATGCGGACCCAAAGTAAAAGGAGGCT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTTGTCACTCACATCCTaGTCGAGCAGCCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTLSLTS*SSSPMR
Trigger: CCTCATGGGGCTGCTCGACCAGGATGTGAGTGACAA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCTTGACAGGAATCGAATaGCAACGACGGGTAGTAAGC +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITLTGIE*QRRVVS
Trigger: GCTTACTACCCGTCGTTGCCATTCGATTCCTGTCAA...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGTTTCTGATGGCCAGATaGTCATTGACAGGAATCGAA +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKFLMAR*SLTGIE
Trigger: TTCGATTCCTGTCAATGACCATCTGGCCATCAGAAA...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTAGCTTCTCAAATAGGTaGGATTACGGGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCSFSNR*DYGCPP
Trigger: TGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGGAAAAAGGGGCCTCTaGGAAATTATGCTGAAGATC +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFGKRGL*EIMLKI
Trigger: GATCTTCAGCATAATTTCCCAGAGGCCCCTTTTTCC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTTGTTGTGGTTGTGTTaGGAGGCATCCCGATGGTCC +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTLLWLC*EASRWS
Trigger: GGACCATCGGGATGCCTCTCAACACAACCACAACAA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp GGAACTGCCTGTAAGATAAGAAGAGCCAGGAAATATAAATTGGCTGCTCTCTTAACTTCGTCATTAGGCTaGGAATCCTCGTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: GTACKIRRARKYKLAALLTSSLG*ESSSNV
Trigger: GACATTTGACGAGGATTCTCAGCCTAATGACGAAGT...TAAGAGAGCAGCCAATTTATATTTCCTGGCTCTTCTTATCTTACAGGCAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR TCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAACCTCTGCTTCCCTGTTaGCTCGGTTTTGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKPLLPC*LGFVLV
Trigger: AACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGG...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGATGTACATTCTTTTCTaGATGGCTCCCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KSFICKDIQGILCFLLSRMYILF*MAPGSP
Trigger: AGGAGAACCGGGAGCCATTCAGAAAAGAATGTACAT...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCATGTACATTCTTTTCTaGATGGCTCCCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITMYILF*MAPGSP
Trigger: AGGAGAACCGGGAGCCATTCAGAAAAGAATGTACAT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCAGCACCTGCAAAAATaGCTAAGCCGTGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCQHLQK*LSRGRN
Trigger: ATTTCTGCCACGGCTTAGTCATTTTTGCAGGTGCTG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGTTCTGGCTCTTTCCCTaGCTGGATTTGCTCAATAAG +
Preference number: 4 (lower is better)
Translates to: KSFICKDIQGILCFLLSRFWLFP*LDLLNK
Trigger: CTTATTGAGCAAATCCAGTCAGGGAAAGAGCCAGAA...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACTTCTGGCTCTTTCCCTaGCTGGATTTGCTCAATAAG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYFWLFP*LDLLNK
Trigger: CTTATTGAGCAAATCCAGTCAGGGAAAGAGCCAGAA...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCAGTCCTATCCACCATaGCTGTGTGGCAAACTGCGA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALQSYPP*LCGKLR
Trigger: TCGCAGTTTGCCACACAGTCATGGTGGATAGGACTG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAGGCTGCCTGGTAGTTaGGCTGACCATCAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALRLPGS*ADHQSY
Trigger: ATAGGACTGATGGTCAGCTCAACTACCAGGCAGCCT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTAGGCTGCCTGGTAGTTaGGCTGACCATCAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTRLPGS*ADHQSY
Trigger: ATAGGACTGATGGTCAGCTCAACTACCAGGCAGCCT...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTAATAGTCACTCGACATaGCAGCTTGCATTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFNSHST*QLAFLL
Trigger: AAGAAGGAATGCAAGCTGTCATGTCGAGTGACTATT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTGAGCAGAGGCAATGGTaGCGGCAAAAGACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTEQRQW*RQKTGS
Trigger: ACTACCAGTCTTTTGCCGTCACCATTGCCTCTGCTC...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACACAGGACTGATATTGTaGACATTCACAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYTGLIL*TFTAQW
Trigger: CCATTGGGCTGTGAATGTTCACAATATCAGTCCTGT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCACAGGACTGATATTGTaGACATTCACAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITTGLIL*TFTAQW
Trigger: CCATTGGGCTGTGAATGTTCACAATATCAGTCCTGT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACCAATGTGGGCAGTTTTaGTCATGTTCACGTCATTGG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYQCGQF*SCSRHW
Trigger: CCAATGACGTGAACATGATCAAAACTGCCCACATTG...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCTGGTCCCCATATATCTaGCCGTTGATACAGCACTTT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITWSPYI*PLIQHF
Trigger: AAAGTGCTGTATCAACGGGCAGATATATGGGGACCA...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGGCTGCTCTCTTAAACTaGTCAAACAGATTCATTGGT +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKAALLN*SNRFIG
Trigger: ACCAATGAATCTGTTTGAGCAGTTTAAGAGAGCAGC...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTGTACTTGCGATCGTTTaGTTTGACTTGCCATGTACA +
Preference number: 4 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSVLAIV*FDLPCT
Trigger: TGTACATGGCAAGTCAAAGCAAACGATCGCAAGTAC...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACTTCTCCATCCAGTTCTaGTGTTTCCACATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYFSIQF*CFHIAE
Trigger: CTCTGCTATGTGGAAACAGCAGAACTGGATGGAGAA...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGGAATTGCCCACCTGTaGTTCCCAATAAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALGIAHL*FPISMA
Trigger: GGCCATGCTTATTGGGAAGCACAGGTGGGCAATTCC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTTCCTGCACAGGAGGTaGAAACTTTGCGTAGACGCC +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALFLHRR*KLCVDA
Trigger: GGCGTCTACGCAAAGTTTGCACCTCCTGTGCAGGAA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCTCGACATGACAGCTTaGATTCCTTCTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITLDMTA*IPSCPL
Trigger: AAGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGAACCAATCCTCGTATaGAGTCTGCGCAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALEPILV*SLRRVA
Trigger: GGCTACTCTGCGCAGACTGCATACGAGGATTGGTTC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTGAACCAATCCTCGTATaGAGTCTGCGCAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTEPILV*SLRRVA
Trigger: GGCTACTCTGCGCAGACTGCATACGAGGATTGGTTC...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTACATTCTTTTCTGAATaGCTCCCGGTTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCTFFSE*LPVLLC
Trigger: GCAGAGGAGAACCGGGAGCCATTCAGAAAAGAATGT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTAAAATGACTAAGCCGTaGCAGAAATCGGTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFKMTKP*QKSVFL
Trigger: TAGGAACACCGATTTCTGCCACGGCTTAGTCATTTT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTCATGTTCACGTCATTaGCCCCATCTCCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALSCSRH*PHLRWP
Trigger: TGGCCATCGGAGATGGGGCCAATGACGTGAACATGA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTCCTCTGCTTCCCTGTTaGCTCGGTTTTGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTPLLPC*LGFVLV
Trigger: AACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGG...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTATGACGTCTCCAACTTaGATTTCTTTCCACTTAGCA +
Preference number: 4 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSMTSPT*ISFHLA
Trigger: TGCTAAGTGGAAAGAAATTCAAGTTGGAGACGTCAT...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGTGCGATCGTTTGCTTTaGCTTGCCATGTACATTCTT +
Preference number: 4 (lower is better)
Translates to: KSFICKDIQGILCFLLSRCDRLL*LAMYIL
Trigger: AAGAATGTACATGGCAAGTCAAAGCAAACGATCGCA...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACTGCGATCGTTTGCTTTaGCTTGCCATGTACATTCTT +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYCDRLL*LAMYIL
Trigger: AAGAATGTACATGGCAAGTCAAAGCAAACGATCGCA...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCTTTACAGTAAAGCTTaGTATTGCCTTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITLYSKA*YCLLGF
Trigger: GAACCCCAGAAGGCAATATCAAGCTTTACTGTAAAG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGGCAGGTCATACAGCTaGCTCCTGTTGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALGRSYS*LLLRKI
Trigger: TATCTTCCTCAACAGGAGTCAGCTGTATGACCTGCC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACAATAGTCACTCGACATaGCAGCTTGCATTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYNSHST*QLAFLL
Trigger: AAGAAGGAATGCAAGCTGTCATGTCGAGTGACTATT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTTCTGGGAAATTATGCTaGAGATCACCGAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFSGKLC*RSPKGK
Trigger: TTTTCCTTTCGGTGATCTTCAGCATAATTTCCCAGA...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGATGGAAACTAGTGTGTaGAAGACACAGAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKMETSV*KTQNEK
Trigger: TTTCTCATTCTGTGTCTTTCACACACTAGTTTCCAT...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTACAGGACTGATATTGTaGACATTCACAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCTGLIL*TFTAQW
Trigger: CCATTGGGCTGTGAATGTTCACAATATCAGTCCTGT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGCCAACAGTATGTCTTTaGCACATTTGCATTGTCAAT +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKPTVCL*HICIVN
Trigger: ATTGACAATGCAAATGTGTCAAAGACATACTGTTGG...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTGGTACCAAGAGGAATTaGCCACCTGTGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTGTKRN*PPVLPN
Trigger: ATTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACC...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGGTACCAAGAGGAATTaGCCACCTGTGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALGTKRN*PPVLPN
Trigger: ATTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTAGTATCGTAGGAACTTaGACATCCTTATGTAAGACC +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFSIVGT*TSLCKT
Trigger: GGTCTTACATAAGGATGTGCAAGTTCCTACGATACT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGTATCTTCTCTTTaGAGGTACTGGTCTGTGATT +
Preference number: 4 (lower is better)
Translates to: FWGSYNDRHSLPVTVEVQNVSSL*RYWSVI
Trigger: AATCACAGACCAGTACCTCCAAAGAGAAGATACATT...TTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACAAAATGACTAAGCCGTaGCAGAAATCGGTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYKMTKP*QKSVFL
Trigger: TAGGAACACCGATTTCTGCCACGGCTTAGTCATTTT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTAAAATGACTAAGCCGTaGCAGAAATCGGTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: NDRHSLPVTVEVQNGKNIKMTKP*QKSVFL
Trigger: TAGGAACACCGATTTCTGCCACGGCTTAGTCATTTT...AATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGATTCCAACGCCAATGTaGGCAGGTCATACAGCTGAC +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALIPTPM*AGHTAD
Trigger: GTCAGCTGTATGACCTGCCCACATTGGCGTTGGAAT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACTTTGTGTTCATAAAGTaGGGTTGTTCGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYFVFIK*GCSWYL
Trigger: CAAGTACCACGAACAACCTCACTTTATGAACACAAA...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTTTTGTGTTCATAAAGTaGGGTTGTTCGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: NDRHSLPVTVEVQNGKNIFVFIK*GCSWYL
Trigger: CAAGTACCACGAACAACCTCACTTTATGAACACAAA...AATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCAGCACCTGCAAAAATaGCTAAGCCGTGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALQHLQK*LSRGRN
Trigger: ATTTCTGCCACGGCTTAGTCATTTTTGCAGGTGCTG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTTCTATTGCCCTGGATTaGGACTGGATTAAAACGTTC +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCSIALD*DWIKTF
Trigger: GAACGTTTTAATCCAGTCTCAATCCAGGGCAATAGA...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCTCTGGGAAATTATGCTaGAGATCACCGAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITSGKLC*RSPKGK
Trigger: TTTTCCTTTCGGTGATCTTCAGCATAATTTCCCAGA...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACGGAATTCAACAGGACTaGTATTGTGAACATTCACAG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYGIQQD*YCEHSQ
Trigger: CTGTGAATGTTCACAATATCAGTCCTGTTGAATTCC...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCGGAATTCAACAGGACTaGTATTGTGAACATTCACAG +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITGIQQD*YCEHSQ
Trigger: CTGTGAATGTTCACAATATCAGTCCTGTTGAATTCC...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCTTTCTGTACTCATTCTaGTGGCAAATTGGAACTACC +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITFLYSF*WQIGTT
Trigger: GGTAGTTCCAATTTGCCAGCAGAATGAGTACAGAAA...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTGTACTTGCGATCGTTTaGTTTGACTTGCCATGTACA +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCVLAIV*FDLPCT
Trigger: TGTACATGGCAAGTCAAAGCAAACGATCGCAAGTAC...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTTCGTTTGCTTTGACTTaGCATGTACATTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFSFALT*HVHSFL
Trigger: CAGAAAAGAATGTACATGGCAAGTCAAAGCAAACGA...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGCATCCTGTGTTTCTTaGTTAGTAGGATTCATTCGA +
Preference number: 4 (lower is better)
Translates to: NDRHSLPVTVEVQNGKNIASCVS*LVGFIR
Trigger: TCGAATGAATCCTACTAAGCAAGAAACACAGGATGC...AATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACGCATCCTGTGTTTCTTaGTTAGTAGGATTCATTCGA +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYASCVS*LVGFIR
Trigger: TCGAATGAATCCTACTAAGCAAGAAACACAGGATGC...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTTCTAAGAGTTTCATTTaGAAAGATATCCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSSKSFI*KDIQGI
Trigger: GATGCCCTGGATATCTTTGCAAATGAAACTCTTAGA...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCGATGTTAGGACCCCATaGAACAAGCTTACAAAGAAT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITDVRTP*NKLTKN
Trigger: ATTCTTTGTAAGCTTGTTGCATGGGGTCCTAACATC...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACTTCAAGCGATTCTTCTaGTTCAGCTTCTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYFKRFF*FSFSNR
Trigger: CCTATTTGAGAAGCTGAAGCAGAAGAATCGCTTGAA...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTCCTTATCCATTTTATaGCGAGCCACATCGTCCACC +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTSLSIL*RATSST
Trigger: GGTGGACGATGTGGCTCGCCATAAAATGGATAAGGA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAATAAGCATGGCCGATaGCAAGACCAGCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALNKHGR*QDQQKA
Trigger: TGCTTTCTGCTGGTCTTGCCATCGGCCATGCTTATT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCCCCATAGCAGATGGTaGTGTCTTCAGTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALPHSRW*CLQSEV
Trigger: AACTTCTGACTGAAGACACCACCATCTGCTATGGGG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGGTATCCAAGCCAATCTaGAAATTGACTGTTATTACA +
Preference number: 4 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKVSKPI*KLTVIT
Trigger: TGTAATAACAGTCAATTTCCAGATTGGCTTGGATAC...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCGCTTGCGATGCTTCTaGATCTTATCACTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCRLRCF*ILSLSD
Trigger: ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTATTCCAACGCCAATGTaGGCAGTTTTGATCATGTTC +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCIPTPM*AVLIMF
Trigger: GAACATGATCAAAACTGCCCACATTGGCGTTGGAAT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGATGTACATTCTTTTCTaGATGGCTCCCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALMYILF*MAPGSP
Trigger: AGGAGAACCGGGAGCCATTCAGAAAAGAATGTACAT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTATGTACATTCTTTTCTaGATGGCTCCCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTMYILF*MAPGSP
Trigger: AGGAGAACCGGGAGCCATTCAGAAAAGAATGTACAT...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTTCTGGCTCTTTCCCTaGCTGGATTTGCTCAATAAG +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTFWLFP*LDLLNK
Trigger: CTTATTGAGCAAATCCAGTCAGGGAAAGAGCCAGAA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTAGGAGGAGGAGATTTTaGTCATGTTCACGTCATTGG +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTRRRRF*SCSRHW
Trigger: CCAATGACGTGAACATGATCAAAATCTCCTCCTCCT...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTAAGCTCCAAGAGGTATaGAGAAGAGGATCATCGATG +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTKLQEV*RRGSSM
Trigger: CATCGATGATCCTCTTCTTCATACCTCTTGGAGCTT...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAATCTATTGCCCTGGATTaGGACTGGATTAAAACGTTC +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKSIALD*DWIKTF
Trigger: GAACGTTTTAATCCAGTCTCAATCCAGGGCAATAGA...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCATAGTGGTCATAAAATaGAAGCTTCCCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITIVVIK*KLPISI
Trigger: TATGCTGATGGGAAGCTTGCATTTTATGACCACTAT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAGTGGTCATAAAATaGAAGCTTCCCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYIVVIK*KLPISI
Trigger: TATGCTGATGGGAAGCTTGCATTTTATGACCACTAT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTATAGTGGTCATAAAATaGAAGCTTCCCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: NDRHSLPVTVEVQNGKNIIVVIK*KLPISI
Trigger: TATGCTGATGGGAAGCTTGCATTTTATGACCACTAT...AATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTTTTCTGTACTCATTCTaGTGGCAAATTGGAACTACC +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCFLYSF*WQIGTT
Trigger: GGTAGTTCCAATTTGCCAGCAGAATGAGTACAGAAA...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGTCGTTTGCTTTGACTTaGCATGTACATTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KSFICKDIQGILCFLLSRSFALT*HVHSFL
Trigger: CAGAAAAGAATGTACATGGCAAGTCAAAGCAAACGA...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTGCATCCTGTGTTTCTTaGTTAGTAGGATTCATTCGA +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCASCVS*LVGFIR
Trigger: TCGAATGAATCCTACTAAGCAAGAAACACAGGATGC...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACTCTAAGAGTTTCATTTaGAAAGATATCCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYSKSFI*KDIQGI
Trigger: GATGCCCTGGATATCTTTGCAAATGAAACTCTTAGA...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTCTGGTTTTCCATCCTTaGATGAAGAAGAGAATTAAT +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFLVFHP*MKKRIN
Trigger: ATTAATTCTCTTCTTCATGCAAGGATGGAAAACCAG...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTTTCAAGCGATTCTTCTaGTTCAGCTTCTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCFKRFF*FSFSNR
Trigger: CCTATTTGAGAAGCTGAAGCAGAAGAATCGCTTGAA...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGGAAACATGAAACCATaGAATCTACTATCAACTTTG +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFGNMKP*NLLSTL
Trigger: CAAAGTTGATAGTAGATTGCATGGTTTCATGTTTCC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCGCAGGCACAAAAGTTTaGTTTCCAAAAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITAGTKV*FPKESF
Trigger: AAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGC...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGTATCCAAGCCAATCTaGAAATTGACTGTTATTACA +
Preference number: 4 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFVSKPI*KLTVIT
Trigger: TGTAATAACAGTCAATTTCCAGATTGGCTTGGATAC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGGAAAAAGGGGCCTCTaGGAAATTATGCTGAAGATC +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALGKRGL*EIMLKI
Trigger: GATCTTCAGCATAATTTCCCAGAGGCCCCTTTTTCC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAAATGACGTCTCCAACTTaGATTTCTTTCCACTTAGCA +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKMTSPT*ISFHLA
Trigger: TGCTAAGTGGAAAGAAATTCAAGTTGGAGACGTCAT...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAATAGTCACTCGACATaGCAGCTTGCATTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALNSHST*QLAFLL
Trigger: AAGAAGGAATGCAAGCTGTCATGTCGAGTGACTATT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCAGCTAAAATCAACTTaGTCTATTTTGTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITQLKST*SILLWL
Trigger: CAACCACAACAAAATAGAGCAAGTTGATTTTAGCTG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTCAGCTAAAATCAACTTaGTCTATTTTGTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: NDRHSLPVTVEVQNGKNIQLKST*SILLWL
Trigger: CAACCACAACAAAATAGAGCAAGTTGATTTTAGCTG...AATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR GCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACCAGCTAAAATCAACTTaGTCTATTTTGTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYQLKST*SILLWL
Trigger: CAACCACAACAAAATAGAGCAAGTTGATTTTAGCTG...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTTCGTTTGCTTTGACTTaGCATGTACATTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCSFALT*HVHSFL
Trigger: CAGAAAAGAATGTACATGGCAAGTCAAAGCAAACGA...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTTCAACCGCTTGCGATaGTTCTGGATCTTATCACTT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTFNRLR*FWILSL
Trigger: AAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCCTATTTCTTGGCTCTaGTATTGTTTAATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITPISWL*YCLIVQ
Trigger: TTGGACTATTAAACAATAGCAGAGCCAAGAAATAGG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTTTCTGATGGCCAGATaGTCATTGACAGGAATCGAA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALFLMAR*SLTGIE
Trigger: TTCGATTCCTGTCAATGACCATCTGGCCATCAGAAA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCGCTTGCGATGCTTCTaGATCTTATCACTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALRLRCF*ILSLSD
Trigger: ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACGTAATTCTATTGCCCTaGATTGAGACTGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYVILLP*IETGLK
Trigger: TTTTAATCCAGTCTCAATCCAGGGCAATAGAATTAC...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCAATCTGTTAATAAGATaGCCTATAGGGAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: PWIETGLKRSLSTIMYITNLLIR*PIGRKK
Trigger: CTTTTTCCTCCCTATAGGCCATCTTATTAACAGATT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTCCAGTCTTAGGAATGTaGCTGCCAATAACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTPVLGM*LPITFS
Trigger: AGAAAAGGTTATTGGCAGCCACATTCCTAAGACTGG...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTTTGTGTTCATAAAGTaGGGTTGTTCGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALFVFIK*GCSWYL
Trigger: CAAGTACCACGAACAACCTCACTTTATGAACACAAA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTATGACGTCTCCAACTTaGATTTCTTTCCACTTAGCA +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTMTSPT*ISFHLA
Trigger: TGCTAAGTGGAAAGAAATTCAAGTTGGAGACGTCAT...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGATGACGTCTCCAACTTaGATTTCTTTCCACTTAGCA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALMTSPT*ISFHLA
Trigger: TGCTAAGTGGAAAGAAATTCAAGTTGGAGACGTCAT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAAGGAGTACCAGAAATaGACCAAAGTAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALKEYQK*TKVKAK
Trigger: CTTTGCCTTTACTTTGGTTCATTTCTGGTACTCCTT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTGTATTCCAGCACTATaGAAGTCAAACATGATGCCA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALCIPAL*KSNMMP
Trigger: TGGCATCATGTTTGACTTTCATAGTGCTGGAATACA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTGCTGCTCTCTTAAACTaGTCAAACAGATTCATTGGT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTAALLN*SNRFIG
Trigger: ACCAATGAATCTGTTTGAGCAGTTTAAGAGAGCAGC...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAATCGTTTGCTTTGACTTaGCATGTACATTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKSFALT*HVHSFL
Trigger: CAGAAAAGAATGTACATGGCAAGTCAAAGCAAACGA...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGCATCCTGTGTTTCTTaGTTAGTAGGATTCATTCGA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALASCVS*LVGFIR
Trigger: TCGAATGAATCCTACTAAGCAAGAAACACAGGATGC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAAAATGTATCTTCTCTTTaGAGGTACTGGTCTGTGATT +
Preference number: 4 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKNVSSL*RYWSVI
Trigger: AATCACAGACCAGTACCTCCAAAGAGAAGATACATT...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CCA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTGTAATTCTATTGCCCTaGATTGAGACTGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCVILLP*IETGLK
Trigger: TTTTAATCCAGTCTCAATCCAGGGCAATAGAATTAC...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR TCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGATGGAAACTAGTGTGTaGAAGACACAGAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALMETSV*KTQNEK
Trigger: TTTCTCATTCTGTGTCTTTCACACACTAGTTTCCAT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTGCAGGCACAAAAGTTTaGTTTCCAAAAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTAGTKV*FPKESF
Trigger: AAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGC...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTAATGTATCTTCTCTTTaGAGGTACTGGTCTGTGATT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTNVSSL*RYWSVI
Trigger: AATCACAGACCAGTACCTCCAAAGAGAAGATACATT...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCAGCTAAAATCAACTTaGTCTATTTTGTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALQLKST*SILLWL
Trigger: CAACCACAACAAAATAGAGCAAGTTGATTTTAGCTG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTCTGGTTTTCCATCCTTaGATGAAGAAGAGAATTAAT +
Preference number: 4 (lower is better)
Translates to: HETMQSTINFEKVIERTTLVFHP*MKKRIN
Trigger: ATTAATTCTCTTCTTCATGCAAGGATGGAAAACCAG...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR GCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCCTATTTCTTGGCTCTaGTATTGTTTAATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALPISWL*YCLIVQ
Trigger: TTGGACTATTAAACAATAGCAGAGCCAAGAAATAGG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGTATCCAAGCCAATCTaGAAATTGACTGTTATTACA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALVSKPI*KLTVIT
Trigger: TGTAATAACAGTCAATTTCCAGATTGGCTTGGATAC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CCA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAGAATTCTCGAACTATaGAAACTAGTGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALRILEL*KLVCER
Trigger: TCTTTCACACACTAGTTTCCATAGTTCGAGAATTCT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS GCA 90 bp CTACCTGCTGGCGTTCGCTGGGCCCCGGCTGGGGCATCCGCCTGGTaGGCGCCGCTCGGAGCGCTCGCTGCGCACCTGGCCGCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: LPAGVRWAPAGASAW*APLGALAAHLAAAA
Trigger: GGCGGCAGCGGCCAGGTGCGCAGCGAGCGCTCCGAGCGGCGCGCACCAGGCGGATGCCCCAGCCGGGGCCCAGCGAACGCCAGCAGGTAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS GCA 90 bp GAACTACCTGGCGTTCGCTGGGCCCCGGCTGGGGCATCCGCCTGGTaGGCGCCGCTCGGAGCGCTCGCTGCGCACCTGGCCGCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: ELPGVRWAPAGASAW*APLGALAAHLAAAA
Trigger: GGCGGCAGCGGCCAGGTGCGCAGCGAGCGCTCCGAGCGGCGCGCACCAGGCGGATGCCCCAGCCGGGGCCCAGCGAACGCCAGGTAGTTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS CCA 90 bp GAACTACCTGCTGGCGTTCGCTGGGCCCCGGCTGGGGCATCCGCCTaGTGCGCGCCGCTCGGAGCGCTCGCTGCGCACCTGGCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: ELPAGVRWAPAGASA*CAPLGALAAHLAAA
Trigger: GGCAGCGGCCAGGTGCGCAGCGAGCGCTCCGAGCGGCGCGCACCAGGCGGATGCCCCAGCCGGGGCCCAGCGAACGCCAGCAGGTAGTTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS CCA 90 bp TTGGAACTACCTGGCGTTCGCTGGGCCCCGGCTGGGGCATCCGCCTaGTGCGCGCCGCTCGGAGCGCTCGCTGCGCACCTGGCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: LELPGVRWAPAGASA*CAPLGALAAHLAAA
Trigger: GGCAGCGGCCAGGTGCGCAGCGAGCGCTCCGAGCGGCGCGCACCAGGCGGATGCCCCAGCCGGGGCCCAGCGAACGCCAGGTAGTTCCAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CAA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTAGGCCGAGCGCCGCGTaGACACGCCCCGGCGGAACA +
Preference number: 5 (lower is better)
Translates to: ARRRRPSAALTRPGGTPARPSAA*TRPGGT
Trigger: TGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCT...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGAGCGGCGAGCGCTTCTaGCGGATGCTGCGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPSGERF*RMLRPE
Trigger: CTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGCT...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTTCCTCTGCTTCCCTGTaGACTCGGTTTTGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: ARRRRPSAALTRPGGTPASSASL*TRFCSG
Trigger: ACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGA...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTTGCCCGAGCTGTTCATaGAGTGTGGTGGTTCTAGCT +
Preference number: 5 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGCPSCS*SVVVLA
Trigger: AGCTAGAACCACCACACTCAATGAACAGCTCGGGCA...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTCCTGTTGACTCGGTTTaGTTCTGGTTCAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: ARRRRPSAALTRPGGTPAPVDSV*FWFNSR
Trigger: TCTGCTGTTGAACCAGAACAAAACCGAGTCAACAGG...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCTCGTCCACCAGGTCTTaGATTGCAGTGACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSSSTRS*IAVTPS
Trigger: GCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGA...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTTCCGCCTTCAACCGCTaGCGATGCTTCTGGATCTTA +
Preference number: 5 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGSAFNR*RCFWIL
Trigger: TAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGA...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTAAAAATAGACGTGCTTaGTGGCCGCATCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGKNRRA*WPHPSL
Trigger: CAGGCTGGGATGCGGCCACAAAGCACGTCTATTTTT...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTTCCTCTGCTTCCCTGTaGACTCGGTTTTGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGSSASL*TRFCSG
Trigger: ACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGA...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGATCATGTTCACGTCATaGGCCCCATCTCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPIMFTS*APSPMA
Trigger: GGCCATCGGAGATGGGGCCAATGACGTGAACATGAT...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAGGCCGAGCGCCGCGTaGACACGCCCCGGCGGAACA +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFRPSAA*TRPGGT
Trigger: TGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATATCATGTTCACGTCATaGGCCCCATCTCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDIMFTS*APSPMA
Trigger: GGCCATCGGAGATGGGGCCAATGACGTGAACATGAT...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCAAAAATAGACGTGCTTaGTGGCCGCATCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSKNRRA*WPHPSL
Trigger: CAGGCTGGGATGCGGCCACAAAGCACGTCTATTTTT...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTCCATATATCTGCCCGTaGATACAGCACTTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: ARRRRPSAALTRPGGTPAPYICP*IQHFLK
Trigger: CTTTAAAAAGTGCTGTATCAACGGGCAGATATATGG...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp GCAGTGACGCCCAGCACCACAAGCAGGGGCACTAGTGTGGTGTACCAAGCCAGGCATTCTGCTGGCAAATaGGAACTACCTGGCGTTCGC +
Preference number: 5 (lower is better)
Translates to: AVTPSTTSRGTSVVYQARHSAGK*ELPGVR
Trigger: GCGAACGCCAGGTAGTTCCAATTTGCCAGCAGAATG...CCTGGCTTGGTACACCACACTAGTGCCCCTGCTTGTGGTGCTGGGCGTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CAA 90 bp ATGGCGAGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACTCGTCCACCAGGTCTTaGATTGCAGTGACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: MASHIVHQVFDCSDAQHHSSTRS*IAVTPS
Trigger: GCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGA...GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCTCGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATAGGTACCAAGAGGAATaGCCCACCTGTGCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDRYQEE*PTCASQ
Trigger: TTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACCT...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp GCGAGAAGGCGTAGGCCGAGCGCCGCGTTGACACGCCCCGGCGGAACACCTGCTCCCAACAGTATGTCTTaGACACATTTGCATTGTCAA +
Preference number: 5 (lower is better)
Translates to: ARRRRPSAALTRPGGTPAPNSMS*THLHCQ
Trigger: TTGACAATGCAAATGTGTCAAAGACATACTGTTGGG...AGCAGGTGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCTACGCCTTCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp TCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGGTGCGCCTGTACTCCGCGGTTTGCGATCGTTTGCTTaGACTTGCCATGTACATTCT +
Preference number: 5 (lower is better)
Translates to: SQPGGKGSAVPGAPVLRGLRSFA*TCHVHS
Trigger: AGAATGTACATGGCAAGTCAAAGCAAACGATCGCAA...ACCGCGGAGTACAGGCGCACCGGGGACAGCTGATCCCTTACCCCCAGGCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCGCTTCCGGTCACTGTaGAAGTCCAAAATGGCAAGA +
Preference number: 5 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDRFRSL*KSKMAR
Trigger: TCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCG...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCATGGCCAGATGGTCATaGACAGGAATCGAATGGCAA +
Preference number: 5 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSMARWS*TGIEWQ
Trigger: TTGCCATTCGATTCCTGTCAATGACCATCTGGCCAT...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCCTCAGCATAGTACATTaGCAGGTCCCAGTTGATGAA +
Preference number: 5 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSLSIVH*QVPVDE
Trigger: TTCATCAACTGGGACCTGCAAATGTACTATGCTGAG...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCGGCATCCTGTGTTTCTaGCTTAGTAGGATTCATTCG +
Preference number: 5 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSGILCF*LSRIHS
Trigger: CGAATGAATCCTACTAAGCAAGAAACACAGGATGCC...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAGAGCTTCGTCCCGGTaGGTGGAGGCCACACTGGCA +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFRASSR*VEATLA
Trigger: TGCCAGTGTGGCCTCCACCAACCGGGACGAAGCTCT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATACTCGACATGACAGCTaGCATTCCTTCTTGTCCACT +
Preference number: 5 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDTRHDS*HSFLST
Trigger: AGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAGT...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp ATGGCGAGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACTCCTCTGCTTCCCTGTaGACTCGGTTTTGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: MASHIVHQVFDCSDAQHHSSASL*TRFCSG
Trigger: ACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGA...GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCTCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CAA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATTCGTCCACCAGGTCTTaGATTGCAGTGACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GRCLSILPYGLQISSKRYSSTRS*IAVTPS
Trigger: GCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGA...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATGTTCATAAAGTGAGGTaGTTCGTGGTACTTGCGATC +
Preference number: 5 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDVHKVR*FVVLAI
Trigger: GATCGCAAGTACCACGAACAACCTCACTTTATGAAC...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp GTTCCTGGCAGCGTTTACCAGGGCACCTTCATCGGGAGAGGCTGCCTGGTAGTTCGCTTCCGGTCACTGTaGAAGTCCAAAATGGCAAGA +
Preference number: 5 (lower is better)
Translates to: VPGSVYQGTFIGRGCLVVRFRSL*KSKMAR
Trigger: TCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCG...AACTACCAGGCAGCCTCTCCCGATGAAGGTGCCCTGGTAAACGCTGCCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGTGCTTTGTAATTCTATaGCCCTGGATTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPCFVIL*PWIETG
Trigger: TCCAGTCTCAATCCAGGGCAATAGAATTACAAAGCA...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp ATGGCGAGCCACATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACCCTGTTGACTCGGTTTaGTTCTGGTTCAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: MASHIVHQVFDCSDAQHHPVDSV*FWFNSR
Trigger: TCTGCTGTTGAACCAGAACAAAACCGAGTCAACAGG...GTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCTCGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATTTCCACTTAGCAACTTaGAACCTGCCATCCTTAATG +
Preference number: 5 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDFHLAT*NLPSLM
Trigger: CATTAAGGATGGCAGGTTCAAAGTTGCTAAGTGGAA...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCAATGACGTCTCCAACTaGAATTTCTTTCCACTTAGC +
Preference number: 5 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSNDVSN*NFFPLS
Trigger: GCTAAGTGGAAAGAAATTCAAGTTGGAGACGTCATT...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCCAGCTTTTGCAAGTTTaGAAATGGTTTCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSQLLQV*KWFLEL
Trigger: GAGTTCCAGAAACCATTTCAAAACTTGCAAAAGCTG...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTAGCGGCGAGCGCTTCTaGCGGATGCTGCGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFSGERF*RMLRPE
Trigger: CTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGCT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGACGTGCTTTGTGGCCGCATCCCAGCCTGGGGGTAAGGGATCAGCTGTCCCCGTTCTTGGCTCTGCTATaGTTTAATAGTCCAACCCAA +
Preference number: 5 (lower is better)
Translates to: RRALWPHPSLGVRDQLSPFLALL*FNSPTQ
Trigger: TTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAA...CGGGGACAGCTGATCCCTTACCCCCAGGCTGGGATGCGGCCACAAAGCACGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATAGGGAATCAAATCATTaGGTACTATGGGAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDRESNH*VLWEAA
Trigger: AGCAGCTTCCCATAGTACCAAATGATTTGATTCCCT...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS TCA 90 bp CAGCGTTTACCAGGGCACCTTCATCGGGAGAGGCTGCCTGGTAGTTaGGCTGACCTAACAAGGAAGCGAGAGAAATCCCAGAAAAGCATC +
Preference number: 5 (lower is better)
Translates to: QRLPGHLHRERLPGS*ADLTRKREKSQKSI
Trigger: GATGCTTTTCTGGGATTTCTCTCGCTTCCTTGTTAGGTCAGCTCAACTACCAGGCAGCCTCTCCCGATGAAGGTGCCCTGGTAAACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS GCA 90 bp ACTGCGCTGCACTCGCAGGCCAGGTCCACAAAGTTTTTCTGCCGCTaGTCTTTCTTAGCTTCTAGCCTCCTTTTACTTTGGGTCCGCATC +
Preference number: 5 (lower is better)
Translates to: TALHSQARSTKFFCR*SFLASSLLLLWVRI
Trigger: GATGCGGACCCAAAGTAAAAGGAGGCTAGAAGCTAAGAAAGAGCAGCGGCAGAAAAACTTTGTGGACCTGGCCTGCGAGTGCAGCGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCATCGTTTGCTTTGACTaGCCATGTACATTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSIVCFD*PCTFFS
Trigger: AGAAAAGAATGTACATGGCAAGTCAAAGCAAACGAT...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTCACATCCTGGTCGAGCAGCCCCATGAGGAGCACGGGCAGGCTGGTGTACAGCAAGCCAATCTGGAAATaGACTGTTATTACAAGAGCA +
Preference number: 5 (lower is better)
Translates to: LTSWSSSPMRSTGRLVYSKPIWK*TVITRA
Trigger: TGCTCTTGTAATAACAGTCAATTTCCAGATTGGCTT...GCTGTACACCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCGACCAGGATGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCAGCGGCGAGCGCTTCTaGCGGATGCTGCGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: PWIETGLKRSLSTIMYITSGERF*RMLRPE
Trigger: CTCCGGGCGCAGCATCCGCAAGAAGCGCTCGCCGCT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS GCA 90 bp AATCCTCGTCAAATGTCGTTTCTGAGTCTCTTTCTGTACTCATTCTaGTGGCAAATTGGAACTACCTGCTGGCGTTCGCTGGGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: NPRQMSFLSLFLYSF*WQIGTTCWRSLGPG
Trigger: GCCGGGGCCCAGCGAACGCCAGCAGGTAGTTCCAATTTGCCAGCAGAATGAGTACAGAAAGAGACTCAGAAACGACATTTGACGAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648039.1
ENST00000648908.2
CDS GCA 90 bp AGGAGGGTGTATCGTCTTCTCCATCATAGAGGTACCAAGAGGAATTaGCCACCTGTGCTTCCCAATAAGCATGGCCGATGGCAAGACCAG +
Preference number: 5 (lower is better)
Translates to: RRVYRLLHHRGTKRN*PPVLPNKHGRWQDQ
Trigger: CTGGTCTTGCCATCGGCCATGCTTATTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACCTCTATGATGGAGAAGACGATACACCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCCAGCTAAAATCAACTaGCTCTATTTTGTTGTGGTT +
Preference number: 5 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDPAKIN*LYFVVV
Trigger: AACCACAACAAAATAGAGCAAGTTGATTTTAGCTGG...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp ATCGTCCACCAGGTCTTTGATTGCAGTGACGCCCAGCACCACAAGCAGGGGCACGCCAGGAAATATAAATaGGCTGCTCTCTTAAACTGC +
Preference number: 5 (lower is better)
Translates to: IVHQVFDCSDAQHHKQGHARKYK*AALLNC
Trigger: GCAGTTTAAGAGAGCAGCCAATTTATATTTCCTGGC...GTGCCCCTGCTTGTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS-3UTR CAA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCTCGTCCACCAGGTCTTaGATTGCAGTGACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSSSTRS*IAVTPS
Trigger: GCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGA...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp GTTCCTGGCAGCGTTTACCAGGGCACCTTCATCGGGAGAGGCTGCCTGGTAGTTTTGCGATCGTTTGCTTaGACTTGCCATGTACATTCT +
Preference number: 5 (lower is better)
Translates to: VPGSVYQGTFIGRGCLVVLRSFA*TCHVHS
Trigger: AGAATGTACATGGCAAGTCAAAGCAAACGATCGCAA...AACTACCAGGCAGCCTCTCCCGATGAAGGTGCCCTGGTAAACGCTGCCAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGAGAGCTTCGTCCCGGTaGGTGGAGGCCACACTGGCA +
Preference number: 5 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKRASSR*VEATLA
Trigger: TGCCAGTGTGGCCTCCACCAACCGGGACGAAGCTCT...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTATCCTGCCCTACGGTTaGCAGATAAGCTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFILPYG*QISSKR
Trigger: CCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGAT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTTCCGCCTTCAACCGCTaGCGATGCTTCTGGATCTTA +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFSAFNR*RCFWIL
Trigger: TAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGA...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTGCCGTCGCTGCCACTGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATAAAAGAGTGAGGTCTTaGTTCAAGTCCCTGATAAAA +
Preference number: 5 (lower is better)
Translates to: LPSLPLLLRLQPLAMLLDKRVRS*FKSLIK
Trigger: TTTTATCAGGGACTTGAACAAAGACCTCACTCTTTT...ATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGCGACGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS GCA 90 bp ATCGTCTTCTCCATCATAGAGGTACCAAGAGGAATTGCCCACCTGTaGTTCCCAATAAGCATGGCCGATGGCAAGACCAGCAGAAAGCAG +
Preference number: 5 (lower is better)
Translates to: IVFSIIEVPRGIAHL*FPISMADGKTSRKQ
Trigger: CTGCTTTCTGCTGGTCTTGCCATCGGCCATGCTTATTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACCTCTATGATGGAGAAGACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CCA 90 bp TGGCTCCCGGTTCTCCTCTGCTTCCCTGTTGACTCGGTTTTGTTCTaGTTCAACAGCAGACCCCTGGTCATCAAGTTCATCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: WLPVLLCFPVDSVLF*FNSRPLVIKFIFCF
Trigger: GAAACAGAAGATGAACTTGATGACCAGGGGTCTGCTGTTGAACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000591728.1
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTTTTGTTGTGGTTGTGTaGAGAGGCATCCCGATGGTC +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFFVVVV*RGIPMV
Trigger: GACCATCGGGATGCCTCTCAACACAACCACAACAAA...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATAATCGGAGGCTCAGTTaGTCACTCACATCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDNRRLS*SLTSWS
Trigger: CGACCAGGATGTGAGTGACAAACTGAGCCTCCGATT...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAGGCCGAGCGCCGCGTaGACACGCCCCGGCGGAACA +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALRPSAA*TRPGGT
Trigger: TGTTCCGCCGGGGCGTGTCAACGCGGCGCTCGGCCT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS GCA 90 bp ATGGATCTGCCCGAGCTGTTCATTGAGTGTGGTGGTTCTAGCTTTTaGGGGTGTGTCCTTCTCAGCATAGTACATTTGCAGGTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: MDLPELFIECGGSSF*GCVLLSIVHLQVPV
Trigger: AACTGGGACCTGCAAATGTACTATGCTGAGAAGGACACACCCGCAAAAGCTAGAACCACCACACTCAATGAACAGCTCGGGCAGATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588255.1
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS GCA 90 bp GACTTGCCATGTACATTCTTTTCTGAATGGCTCCCGGTTCTCCTCTaGTTCCCTGTTGACTCGGTTTTGTTCTGGTTCAACAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: DLPCTFFSEWLPVLL*FPVDSVLFWFNSRP
Trigger: GGGTCTGCTGTTGAACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAGCCATTCAGAAAAGAATGTACATGGCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS GCA 90 bp AATCCTCGTCAAATGTCGTTTCTGAGTCTCTTTCTGTACTCATTCTaGTGGCAAATTGGAACTACCTGCGGGCAGAAGCGCGGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: NPRQMSFLSLFLYSF*WQIGTTCGQKRGPS
Trigger: ACTTGGGCCGCGCTTCTGCCCGCAGGTAGTTCCAATTTGCCAGCAGAATGAGTACAGAAAGAGACTCAGAAACGACATTTGACGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642462.1
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTCCTGTTGACTCGGTTTaGTTCTGGTTCAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFPVDSV*FWFNSR
Trigger: TCTGCTGTTGAACCAGAACAAAACCGAGTCAACAGG...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATGGCATCCTGTGTTTCTaGCTTAGTAGGATTCATTCG +
Preference number: 5 (lower is better)
Translates to: GRCLSILPYGLQISSKRYGILCF*LSRIHS
Trigger: CGAATGAATCCTACTAAGCAAGAAACACAGGATGCC...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACAGAGCTTCGTCCCGGTaGGTGGAGGCCACACTGGCA +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYRASSR*VEATLA
Trigger: TGCCAGTGTGGCCTCCACCAACCGGGACGAAGCTCT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATGAGGAGGAGGAGATTTaGATCATGTTCACGTCATTG +
Preference number: 5 (lower is better)
Translates to: GRCLSILPYGLQISSKRYEEEEI*IMFTSL
Trigger: CAATGACGTGAACATGATCAAAATCTCCTCCTCCTC...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTCTGCAGCCGCCCTTTaGCCTCCGCTCCGCCGGACC +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALSAAAL*PPLRRT
Trigger: GGTCCGGCGGAGCGGAGGCAAAAGGGCGGCTGCAGA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS-3UTR CAA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCTTTGTTGTGGTTGTGTaGAGAGGCATCCCGATGGTC +
Preference number: 5 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSFVVVV*RGIPMV
Trigger: GACCATCGGGATGCCTCTCAACACAACCACAACAAA...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATGCCAGGAAATATAAATaGGCTGCTCTCTTAAACTGC +
Preference number: 5 (lower is better)
Translates to: GRCLSILPYGLQISSKRYARKYK*AALLNC
Trigger: GCAGTTTAAGAGAGCAGCCAATTTATATTTCCTGGC...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATACTCGACATGACAGCTaGCATTCCTTCTTGTCCACT +
Preference number: 5 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDTRHDS*HSFLST
Trigger: AGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAGT...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATCCATATATCTGCCCGTaGATACAGCACTTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: GRCLSILPYGLQISSKRYPYICP*IQHFLK
Trigger: CTTTAAAAAGTGCTGTATCAACGGGCAGATATATGG...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTGCCAGGAAATATAAATaGGCTGCTCTCTTAAACTGC +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFARKYK*AALLNC
Trigger: GCAGTTTAAGAGAGCAGCCAATTTATATTTCCTGGC...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCTCGTCCACCAGGTCTTaGATTGCAGTGACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PWIETGLKRSLSTIMYITSSTRS*IAVTPS
Trigger: GCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGA...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATGTTCATAAAGTGAGGTaGTTCGTGGTACTTGCGATC +
Preference number: 5 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDVHKVR*FVVLAI
Trigger: GATCGCAAGTACCACGAACAACCTCACTTTATGAAC...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTTTGCGATCGTTTGCTTaGACTTGCCATGTACATTCT +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFLRSFA*TCHVHS
Trigger: AGAATGTACATGGCAAGTCAAAGCAAACGATCGCAA...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGCAGGAGGTGCAAACTTaGCGTAGACGCCACCTCTAT +
Preference number: 5 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKQEVQT*RRRHLY
Trigger: ATAGAGGTGGCGTCTACGCAAAGTTTGCACCTCCTG...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTTGCTTTGTAATTCTATaGCCCTGGATTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFCFVIL*PWIETG
Trigger: TCCAGTCTCAATCCAGGGCAATAGAATTACAAAGCA...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAGGGAATCAAATCATTaGGTACTATGGGAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFRESNH*VLWEAA
Trigger: AGCAGCTTCCCATAGTACCAAATGATTTGATTCCCT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS TCA 90 bp GCCTCTGCAGATATCGGAACTGAGCAAAGGAATAGTCACTCGACATaGCAGCTTGCATTCCTTCTTGTCCACTTATTCCAACGCCAATGT +
Preference number: 5 (lower is better)
Translates to: ASADIGTEQRNSHST*QLAFLLVHLFQRQC
Trigger: ACATTGGCGTTGGAATAAGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAGTGACTATTCCTTTGCTCAGTTCCGATATCTGCAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCCTCAGCATAGTACATTaGCAGGTCCCAGTTGATGAA +
Preference number: 5 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSLSIVH*QVPVDE
Trigger: TTCATCAACTGGGACCTGCAAATGTACTATGCTGAG...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp GGAAGGTGCCTCTCCATCCTGCCCTACGGTTTGCAGATAAGCTCCAAGAGGTATACTTCACACGTCCTATaGTTGATTTCCTTATCCATT +
Preference number: 5 (lower is better)
Translates to: GRCLSILPYGLQISSKRYTSHVL*LISLSI
Trigger: AATGGATAAGGAAATCAACAATAGGACGTGTGAAGT...ATACCTCTTGGAGCTTATCTGCAAACCGTAGGGCAGGATGGAGAGGCACCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTAGGTACCAAGAGGAATaGCCCACCTGTGCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSRYQEE*PTCASQ
Trigger: TTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACCT...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATCATGTTCACGTCATaGGCCCCATCTCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYIMFTS*APSPMA
Trigger: GGCCATCGGAGATGGGGCCAATGACGTGAACATGAT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTCATTCTGCTGGCAAATaGGAACTACCTGCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFHSAGK*ELPAGR
Trigger: TCTGCCCGCAGGTAGTTCCAATTTGCCAGCAGAATG...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642462.1
CDS-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTTTTGTTGTGGTTGTGTaGAGAGGCATCCCGATGGTC +
Preference number: 5 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFFVVVV*RGIPMV
Trigger: GACCATCGGGATGCCTCTCAACACAACCACAACAAA...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTCCAGCTAAAATCAACTaGCTCTATTTTGTTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFPAKIN*LYFVVV
Trigger: AACCACAACAAAATAGAGCAAGTTGATTTTAGCTGG...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp TTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAACCTGTTGACTCGGTTTaGTTCTGGTTCAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: FWGSYNDRHSLPVTVEVQPVDSV*FWFNSR
Trigger: TCTGCTGTTGAACCAGAACAAAACCGAGTCAACAGG...TTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTTCCTCTGCTTCCCTGTaGACTCGGTTTTGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFSSASL*TRFCSG
Trigger: ACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGA...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACAGGTACCAAGAGGAATaGCCCACCTGTGCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYRYQEE*PTCASQ
Trigger: TTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACCT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCAATCGGAGGCTCAGTTaGTCACTCACATCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PWIETGLKRSLSTIMYITNRRLS*SLTSWS
Trigger: CGACCAGGATGTGAGTGACAAACTGAGCCTCCGATT...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATTTCTTGGCTCTGCTATaGTTTAATAGTCCAACCCAA +
Preference number: 5 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDFLALL*FNSPTQ
Trigger: TTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAA...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTAAAAGAGTGAGGTCTTaGTTCAAGTCCCTGATAAAA +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFKRVRS*FKSLIK
Trigger: TTTTATCAGGGACTTGAACAAAGACCTCACTCTTTT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGCTTCTCAAATAGGTGGGATTACGGGTGCCCACCACCAAGCCCGGCTAATTTTATGTCTTTGACACATTaGCATTGTCAATCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SFSNRWDYGCPPPSPANFMSLTH*HCQSFP
Trigger: TGGGAAAGATTGACAATGCAAATGTGTCAAAGACAT...AAAATTAGCCGGGCTTGGTGGTGGGCACCCGTAATCCCACCTATTTGAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGCTCAGCATAGTACATTaGCAGGTCCCAGTTGATGAA +
Preference number: 5 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKLSIVH*QVPVDE
Trigger: TTCATCAACTGGGACCTGCAAATGTACTATGCTGAG...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATCCAGCTAAAATCAACTaGCTCTATTTTGTTGTGGTT +
Preference number: 5 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDPAKIN*LYFVVV
Trigger: AACCACAACAAAATAGAGCAAGTTGATTTTAGCTGG...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGTCCTCTGCTTCCCTGTaGACTCGGTTTTGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: KSFICKDIQGILCFLLSRSSASL*TRFCSG
Trigger: ACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGA...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTGGTTGTTCGTGGTACTaGCGATCGTTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFGCSWY*RSFALT
Trigger: AGTCAAAGCAAACGATCGCAAGTACCACGAACAACC...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTGGTTGTTCGTGGTACTaGCGATCGTTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSGCSWY*RSFALT
Trigger: AGTCAAAGCAAACGATCGCAAGTACCACGAACAACC...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAATGACGTCTCCAACTaGAATTTCTTTCCACTTAGC +
Preference number: 5 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSNDVSN*NFFPLS
Trigger: GCTAAGTGGAAAGAAATTCAAGTTGGAGACGTCATT...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCATTCTGCTGGCAAATaGGAACTACCTGCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: PWIETGLKRSLSTIMYITHSAGK*ELPAGV
Trigger: AACGCCAGCAGGTAGTTCCAATTTGCCAGCAGAATG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACCATTCTGCTGGCAAATaGGAACTACCTGCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYHSAGK*ELPAGV
Trigger: AACGCCAGCAGGTAGTTCCAATTTGCCAGCAGAATG...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCGCTTCCGGTCACTGTaGAAGTCCAAAATGGCAAGA +
Preference number: 5 (lower is better)
Translates to: PWIETGLKRSLSTIMYITRFRSL*KSKMAR
Trigger: TCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTCAGGAGGTGCAAACTTaGCGTAGACGCCACCTCTAT +
Preference number: 5 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCQEVQT*RRRHLY
Trigger: ATAGAGGTGGCGTCTACGCAAAGTTTGCACCTCCTG...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTATGGCCAGATGGTCATaGACAGGAATCGAATGGCAA +
Preference number: 5 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFMARWS*TGIEWQ
Trigger: TTGCCATTCGATTCCTGTCAATGACCATCTGGCCAT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp TGCTCCTCCGCCTTCAACCGCTTGCGATGCTTCTGGATCTTATCACTTTCTGATATGTCTTTGACACATTaGCATTGTCAATCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: CSSAFNRLRCFWILSLSDMSLTH*HCQSFP
Trigger: TGGGAAAGATTGACAATGCAAATGTGTCAAAGACAT...ATCAGAAAGTGATAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS TCA 90 bp AACCACTTCGTCATTAGGCTGAGAATCCTCGTCAAATGTCGTTTCTaGGTCTCTTTCTGTACTCATTCTGCTGGCAAATTGGAACTACCT +
Preference number: 5 (lower is better)
Translates to: NHFVIRLRILVKCRF*VSFCTHSAGKLELP
Trigger: AGGTAGTTCCAATTTGCCAGCAGAATGAGTACAGAAAGAGACTCAGAAACGACATTTGACGAGGATTCTCAGCCTAATGACGAAGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591728.1
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CCTTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCCCAGCTAAAATCAACTaGCTCTATTTTGTTGTGGTT +
Preference number: 5 (lower is better)
Translates to: PSGVLTMIDIRFRSLLKSPAKIN*LYFVVV
Trigger: AACCACAACAAAATAGAGCAAGTTGATTTTAGCTGG...GGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCCTGTTGACTCGGTTTaGTTCTGGTTCAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: PWIETGLKRSLSTIMYITPVDSV*FWFNSR
Trigger: TCTGCTGTTGAACCAGAACAAAACCGAGTCAACAGG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTGGCATCCTGTGTTTCTaGCTTAGTAGGATTCATTCG +
Preference number: 5 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSGILCF*LSRIHS
Trigger: CGAATGAATCCTACTAAGCAAGAAACACAGGATGCC...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACACTCGACATGACAGCTaGCATTCCTTCTTGTCCACT +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYTRHDS*HSFLST
Trigger: AGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAGT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGTGCTTTGTAATTCTATaGCCCTGGATTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKCFVIL*PWIETG
Trigger: TCCAGTCTCAATCCAGGGCAATAGAATTACAAAGCA...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGAGCCAGGGTAGAGATTaGAGGAACTGCCGCATATTT +
Preference number: 5 (lower is better)
Translates to: KSFICKDIQGILCFLLSRSQGRD*RNCRIF
Trigger: AAATATGCGGCAGTTCCTCAAATCTCTACCCTGGCT...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS TCA 90 bp AACTGCGAGCAAGAAGAAGAACTGTCGTACTTCTGGCTCTTTCCCTaGCTGGATTTGCTCAATAAGATAGTGGTCATAAAATGCAAGCTT +
Preference number: 5 (lower is better)
Translates to: NCEQEEELSYFWLFP*LDLLNKIVVIKCKL
Trigger: AAGCTTGCATTTTATGACCACTATCTTATTGAGCAAATCCAGTCAGGGAAAGAGCCAGAAGTACGACAGTTCTTCTTCTTGCTCGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS GCA 90 bp TTTTGTGTTCATAAAGTGAGGTTGTTCGTGGTACTTGCGATCGTTTaGTTTGACTTGCCATGTACATTCTTTTCTGAATGGCTCCCGGTT +
Preference number: 5 (lower is better)
Translates to: FCVHKVRLFVVLAIV*FDLPCTFFSEWLPV
Trigger: AACCGGGAGCCATTCAGAAAAGAATGTACATGGCAAGTCAAAGCAAACGATCGCAAGTACCACGAACAACCTCACTTTATGAACACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CCA 90 bp CCTCCTTTTACTTTGGGTCCGCATCCGTCTTTCTTCTTCTGTTCTTaGGAACTTCAGCTTCAGAATCTTATTTCTCTTGGTCTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: PPFTLGPHPSFFFCS*ELQLQNLISLGLFL
Trigger: GAGAAAAAGACCAAGAGAAATAAGATTCTGAAGCTGAAGTTCCCAAGAACAGAAGAAGAAAGACGGATGCGGACCCAAAGTAAAAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCTCAGCATAGTACATTaGCAGGTCCCAGTTGATGAA +
Preference number: 5 (lower is better)
Translates to: PWIETGLKRSLSTIMYITLSIVH*QVPVDE
Trigger: TTCATCAACTGGGACCTGCAAATGTACTATGCTGAG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp TTCTGGGGTTCTTACAATGATAGACATTCGCTTCCGGTCACTGTTGAAGTCCAACCATATATCTGCCCGTaGATACAGCACTTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: FWGSYNDRHSLPVTVEVQPYICP*IQHFLK
Trigger: CTTTAAAAAGTGCTGTATCAACGGGCAGATATATGG...TTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGTAAGAACCCCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAATTTGTTGTGGTTGTGTaGAGAGGCATCCCGATGGTC +
Preference number: 5 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKFVVVV*RGIPMV
Trigger: GACCATCGGGATGCCTCTCAACACAACCACAACAAA...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGGTTCATAAAGTGAGGTaGTTCGTGGTACTTGCGATC +
Preference number: 5 (lower is better)
Translates to: KSFICKDIQGILCFLLSRVHKVR*FVVLAI
Trigger: GATCGCAAGTACCACGAACAACCTCACTTTATGAAC...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAGGTACCAAGAGGAATaGCCCACCTGTGCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALRYQEE*PTCASQ
Trigger: TTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACCT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACACTCCATCCTGTAGCTaGTCTTCAATAGCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYTPSCS*SSIAVA
Trigger: AGCTACAGCTATTGAAGACAAGCTACAGGATGGAGT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTCAGGAGGTGCAAACTTaGCGTAGACGCCACCTCTAT +
Preference number: 5 (lower is better)
Translates to: HETMQSTINFEKVIERTTQEVQT*RRRHLY
Trigger: ATAGAGGTGGCGTCTACGCAAAGTTTGCACCTCCTG...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACGAGGAGGAGGAGATTTaGATCATGTTCACGTCATTG +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYEEEEI*IMFTSL
Trigger: CAATGACGTGAACATGATCAAAATCTCCTCCTCCTC...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTCCGCCTTCAACCGCTaGCGATGCTTCTGGATCTTA +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALSAFNR*RCFWIL
Trigger: TAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGAAAAATAGACGTGCTTaGTGGCCGCATCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALKNRRA*WPHPSL
Trigger: CAGGCTGGGATGCGGCCACAAAGCACGTCTATTTTT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACCCAATGTGGGCAGTTTaGATCATGTTCACGTCATTG +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYPMWAV*IMFTSL
Trigger: CAATGACGTGAACATGATCAAAACTGCCCACATTGG...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS CCA 90 bp CTAGGAAGACAGAAGATTATTTTCCGTAGAGAGCTCGGATACGAGTaGCAAGTAGTAGAGATTTTATTCTCATTGTACAGACGAGAGCAA +
Preference number: 5 (lower is better)
Translates to: LGRQKIIFRRELGYE*QVVEILFSLYRREQ
Trigger: TTGCTCTCGTCTGTACAATGAGAATAAAATCTCTACTACTTGCCACTCGTATCCGAGCTCTCTACGGAAAATAATCTTCTGTCTTCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588255.1
CDS-3UTR CAA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGTTCCACTTAGCAACTTaGAACCTGCCATCCTTAATG +
Preference number: 5 (lower is better)
Translates to: KSFICKDIQGILCFLLSRFHLAT*NLPSLM
Trigger: CATTAAGGATGGCAGGTTCAAAGTTGCTAAGTGGAA...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTAATGACGTCTCCAACTaGAATTTCTTTCCACTTAGC +
Preference number: 5 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFNDVSN*NFFPLS
Trigger: GCTAAGTGGAAAGAAATTCAAGTTGGAGACGTCATT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp GGTATGAAGAAGAGGATCATCGATGTTAGGACCCCATGCAACAAGCTTACAAAGAAAAGAGTGAGGTCTTaGTTCAAGTCCCTGATAAAA +
Preference number: 5 (lower is better)
Translates to: GMKKRIIDVRTPCNKLTKKRVRS*FKSLIK
Trigger: TTTTATCAGGGACTTGAACAAAGACCTCACTCTTTT...CTTTGTAAGCTTGTTGCATGGGGTCCTAACATCGATGATCCTCTTCTTCATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTCCCAACAGTATGTCTTaGACACATTTGCATTGTCAA +
Preference number: 5 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFPNSMS*THLHCQ
Trigger: TTGACAATGCAAATGTGTCAAAGACATACTGTTGGG...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGGTTGTTCGTGGTACTaGCGATCGTTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALGCSWY*RSFALT
Trigger: AGTCAAAGCAAACGATCGCAAGTACCACGAACAACC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGACATTCGCTTCCGGTCACTGTTGAAGTCCAAAATGGCAAGAACATTGTAAGTACTTCACACGTCCTATaGTTGATTTCCTTATCCATT +
Preference number: 5 (lower is better)
Translates to: RHSLPVTVEVQNGKNIVSTSHVL*LISLSI
Trigger: AATGGATAAGGAAATCAACAATAGGACGTGTGAAGT...ACTTACAATGTTCTTGCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACAATGACGTCTCCAACTaGAATTTCTTTCCACTTAGC +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYNDVSN*NFFPLS
Trigger: GCTAAGTGGAAAGAAATTCAAGTTGGAGACGTCATT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACATAACCCAGCTTTTGCAAGTTTaGAAATGGTTTCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: PWIETGLKRSLSTIMYITQLLQV*KWFLEL
Trigger: GAGTTCCAGAAACCATTTCAAAACTTGCAAAAGCTG...GGTTATGTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGATGGCCAGATGGTCATaGACAGGAATCGAATGGCAA +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALMARWS*TGIEWQ
Trigger: TTGCCATTCGATTCCTGTCAATGACCATCTGGCCAT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTAGGGAATCAAATCATTaGGTACTATGGGAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCRESNH*VLWEAA
Trigger: AGCAGCTTCCCATAGTACCAAATGATTTGATTCCCT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp TTTAAAAGGACACACCATTCCCCAGTCTTAGGAATGTGGCTGCCAATAACCTTTATGTCTTTGACACATTaGCATTGTCAATCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: FKRTHHSPVLGMWLPITFMSLTH*HCQSFP
Trigger: TGGGAAAGATTGACAATGCAAATGTGTCAAAGACAT...AAAGGTTATTGGCAGCCACATTCCTAAGACTGGGGAATGGTGTGTCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGTTCATAAAGTGAGGTaGTTCGTGGTACTTGCGATC +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALVHKVR*FVVLAI
Trigger: GATCGCAAGTACCACGAACAACCTCACTTTATGAAC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAGAGTTTCATTTGCAAAGATATCCAGGGCATCCTGTGTTTCTTGCTTAGTAGGATCGTTTGCTTTGACTaGCCATGTACATTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KSFICKDIQGILCFLLSRIVCFD*PCTFFS
Trigger: AGAAAAGAATGTACATGGCAAGTCAAAGCAAACGAT...CCTACTAAGCAAGAAACACAGGATGCCCTGGATATCTTTGCAAATGAAACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS-3UTR CAA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTGGCATCCTGTGTTTCTaGCTTAGTAGGATTCATTCG +
Preference number: 5 (lower is better)
Translates to: HETMQSTINFEKVIERTTGILCF*LSRIHS
Trigger: CGAATGAATCCTACTAAGCAAGAAACACAGGATGCC...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGACTCCATCCTGTAGCTaGTCTTCAATAGCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALTPSCS*SSIAVA
Trigger: AGCTACAGCTATTGAAGACAAGCTACAGGATGGAGT...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTACTCCATCCTGTAGCTaGTCTTCAATAGCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: HETMQSTINFEKVIERTTTPSCS*SSIAVA
Trigger: AGCTACAGCTATTGAAGACAAGCTACAGGATGGAGT...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CTATTGCCCTGGATTGAGACTGGATTAAAACGTTCCCTTTCAACCATAATGTACAAGCCAATCTGGAAATaGACTGTTATTACAAGAGCA +
Preference number: 5 (lower is better)
Translates to: LLPWIETGLKRSLSTIMYKPIWK*TVITRA
Trigger: TGCTCTTGTAATAACAGTCAATTTCCAGATTGGCTT...GTACATTATGGTTGAAAGGGAACGTTTTAATCCAGTCTCAATCCAGGGCAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS GCA 90 bp AGATTTTATTCTCATTGTACAGACGAGAGCAAGCTGCTTATTTACTaGTATGGTCTGAATGTTAGAATCCCCCTCCAAATTCATATGTTG +
Preference number: 5 (lower is better)
Translates to: RFYSHCTDESKLLIY*YGLNVRIPLQIHML
Trigger: CAACATATGAATTTGGAGGGGGATTCTAACATTCAGACCATAGCAGTAAATAAGCAGCTTGCTCTCGTCTGTACAATGAGAATAAAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588255.1
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGGCCAGGAAATATAAATaGGCTGCTCTCTTAAACTGC +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALARKYK*AALLNC
Trigger: GCAGTTTAAGAGAGCAGCCAATTTATATTTCCTGGC...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTACTTCACACGTCCTATaGTTGATTTCCTTATCCATT +
Preference number: 5 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCTSHVL*LISLSI
Trigger: AATGGATAAGGAAATCAACAATAGGACGTGTGAAGT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTTCCACTTAGCAACTTaGAACCTGCCATCCTTAATG +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALFHLAT*NLPSLM
Trigger: CATTAAGGATGGCAGGTTCAAAGTTGCTAAGTGGAA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTTCCACTTAGCAACTTaGAACCTGCCATCCTTAATG +
Preference number: 5 (lower is better)
Translates to: HETMQSTINFEKVIERTTFHLAT*NLPSLM
Trigger: CATTAAGGATGGCAGGTTCAAAGTTGCTAAGTGGAA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTATCGTTTGCTTTGACTaGCCATGTACATTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCIVCFD*PCTFFS
Trigger: AGAAAAGAATGTACATGGCAAGTCAAAGCAAACGAT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AGATGGAAAGAGAACATGTATTCCAGCACTATGAAAGTCAAACATGATGCCAAACAGCTTTTGCAAGTTTaGAAATGGTTTCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: RWKENMYSSTMKVKHDAKQLLQV*KWFLEL
Trigger: GAGTTCCAGAAACCATTTCAAAACTTGCAAAAGCTG...TTTGGCATCATGTTTGACTTTCATAGTGCTGGAATACATGTTCTCTTTCCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS-3UTR CAA 90 bp AAGTCCTATTTCTTGGCTCTGCTATTGTTTAATAGTCCAACCCAAGGAGTTTGTAAGCCAATCTGGAAATaGACTGTTATTACAAGAGCA +
Preference number: 5 (lower is better)
Translates to: KSYFLALLLFNSPTQGVCKPIWK*TVITRA
Trigger: TGCTCTTGTAATAACAGTCAATTTCCAGATTGGCTT...ACAAACTCCTTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAAATAGGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCCATATATCTGCCCGTaGATACAGCACTTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALPYICP*IQHFLK
Trigger: CTTTAAAAAGTGCTGTATCAACGGGCAGATATATGG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGTTTCTTCTTCTGTTCTaGGGAACTTCAGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALFLLLF*GTSASE
Trigger: TTCTGAAGCTGAAGTTCCCAAGAACAGAAGAAGAAA...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTTTCTTCTTCTGTTCTaGGGAACTTCAGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: HETMQSTINFEKVIERTTFLLLF*GTSASE
Trigger: TTCTGAAGCTGAAGTTCCCAAGAACAGAAGAAGAAA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTTTCTTGGCTCTGCTATaGTTTAATAGTCCAACCCAA +
Preference number: 5 (lower is better)
Translates to: HETMQSTINFEKVIERTTFLALL*FNSPTQ
Trigger: TTGGGTTGGACTATTAAACAATAGCAGAGCCAAGAA...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp AAATACTTTGCATATAGGCAGGCACAAAAGTTTGCTTTCCAAAAGAAAGCTTTGCCCAACAGTATGTCTTaGACACATTTGCATTGTCAA +
Preference number: 5 (lower is better)
Translates to: KYFAYRQAQKFAFQKKALPNSMS*THLHCQ
Trigger: TTGACAATGCAAATGTGTCAAAGACATACTGTTGGG...CAAAGCTTTCTTTTGGAAAGCAAACTTTTGTGCCTGCCTATATGCAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS-3UTR CAA 90 bp CATGAAACCATGCAATCTACTATCAACTTTGAAAAAGTGATTGAACGAACCACTATCGTTTGCTTTGACTaGCCATGTACATTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: HETMQSTINFEKVIERTTIVCFD*PCTFFS
Trigger: AGAAAAGAATGTACATGGCAAGTCAAAGCAAACGAT...AGTGGTTCGTTCAATCACTTTTTCAAAGTTGATAGTAGATTGCATGGTTTCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS CCA 72 bp CCTGGCGTTCGCTGGGCCCCGGCTGGGGCATCCGCCTaGTGCGCGCCGCTCGGAGCGCTCGCTGCGCACCTG +
Preference number: 6 (lower is better)
Translates to: PGVRWAPAGASA*CAPLGALAAHL
Trigger: CAGGTGCGCAGCGAGCGCTCCGAGCGGCGCGCACCAGGCGGATGCCCCAGCCGGGGCCCAGCGAACGCCAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS CCA 72 bp GCTGGCGTTCGCTGGGCCCCGGCTGGGGCATCCGCCTaGTGCGCGCCGCTCGGAGCGCTCGCTGCGCACCTG +
Preference number: 6 (lower is better)
Translates to: AGVRWAPAGASA*CAPLGALAAHL
Trigger: CAGGTGCGCAGCGAGCGCTCCGAGCGGCGCGCACCAGGCGGATGCCCCAGCCGGGGCCCAGCGAACGCCAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS CCA 72 bp CAAATTGGAACTACCTGGCGTTCGCTGGGCCCCGGCTaGGGCATCCGCCTGGTGCGCGCCGCTCGGAGCGCT +
Preference number: 6 (lower is better)
Translates to: QIGTTWRSLGPG*GIRLVRAARSA
Trigger: AGCGCTCCGAGCGGCGCGCACCAGGCGGATGCCCCAGCCGGGGCCCAGCGAACGCCAGGTAGTTCCAATTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS CAA 72 bp CCCGCGTCCGTGCACCCTTCCTCTGCAGCCGCCCTTTaGCCTCCGCTCCGCCGGACCGGCCAAACTGGTTTC +
Preference number: 6 (lower is better)
Translates to: PASVHPSSAAAL*PPLRRTGQTGF
Trigger: GAAACCAGTTTGGCCGGTCCGGCGGAGCGGAGGCAAAAGGGCGGCTGCAGAGGAAGGGTGCACGGACGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS GCA 72 bp CCGCGTCCGTGCACCCTTCCTCTGCAGCCGCCCTTTTaGCTCCGCTCCGCCGGACCGGCCAAACTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: PRPCTLPLQPPF*LRSAGPAKLVS
Trigger: AGAAACCAGTTTGGCCGGTCCGGCGGAGCGGAGGCAAAAGGGCGGCTGCAGAGGAAGGGTGCACGGACGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS CAA 72 bp TCCATTTTATGGCGAGCCACATCGTCCACCAGGTCTTaGATTGCAGTGACGCCCAGCACCACAAGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SILWRATSSTRS*IAVTPSTTSRG
Trigger: GCCCCTGCTTGTGGTGCTGGGCGTCACTGCAATCAAAGACCTGGTGGACGATGTGGCTCGCCATAAAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000589147.5
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS GCA 72 bp TCCATCATAGAGGTACCAAGAGGAATTGCCCACCTGTaGTTCCCAATAAGCATGGCCGATGGCAAGACCAGC +
Preference number: 6 (lower is better)
Translates to: SIIEVPRGIAHL*FPISMADGKTS
Trigger: GCTGGTCTTGCCATCGGCCATGCTTATTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACCTCTATGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 90 bp TCTGAATGGCTCCCGGTTCTCCTCTGCTTCCCTGTTGACTCGGTTTaGTTCTGGTTCAACAGCAGACCCCTGGTCATCAAGTTCATCTTC +
Preference number: 6 (lower is better)
Translates to: SEWLPVLLCFPVDSV*FWFNSRPLVIKFIF
Trigger: GAAGATGAACTTGATGACCAGGGGTCTGCTGTTGAACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAGCCATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000591728.1
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS GCA 72 bp CCCGAGCTGTTCATTGAGTGTGGTGGTTCTAGCTTTTaGGGGTGTGTCCTTCTCAGCATAGTACATTTGCAG +
Preference number: 6 (lower is better)
Translates to: PELFIECGGSSF*GCVLLSIVHLQ
Trigger: CTGCAAATGTACTATGCTGAGAAGGACACACCCGCAAAAGCTAGAACCACCACACTCAATGAACAGCTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588255.1
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS GCA 72 bp TATCGTCTTCTCCATCATAGAGGTACCAAGAGGAATTaGCCACCTGTGCTTCCCAATAAGCATGGCCGATGG +
Preference number: 6 (lower is better)
Translates to: YRLLHHRGTKRN*PPVLPNKHGRW
Trigger: CCATCGGCCATGCTTATTGGGAAGCACAGGTGGGCAATTCCTCTTGGTACCTCTATGATGGAGAAGACGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS GCA 72 bp ACCATCAGTCCTATCCACCATGACTGTGTGGCAAACTaGGAGCAAGAAGAAGAACTGTCGTACTTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: TISPIHHDCVAN*EQEEELSYFWL
Trigger: GAGCCAGAAGTACGACAGTTCTTCTTCTTGCTCGCAGTTTGCCACACAGTCATGGTGGATAGGACTGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS GCA 72 bp AGCATCAGTCCTATCCACCATGACTGTGTGGCAAACTaGGAGCAAGAAGAAGAACTGTCGTACTTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SISPIHHDCVAN*EQEEELSYFWL
Trigger: GAGCCAGAAGTACGACAGTTCTTCTTCTTGCTCGCAGTTTGCCACACAGTCATGGTGGATAGGACTGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648467.1
CDS CCA 72 bp GTTCTCCTCTGCTTCCCTGTTGACTCGGTTTTGTTCTaGTTCAACAGCAGACCCCTGGTCATCAAGTTCATC +
Preference number: 6 (lower is better)
Translates to: VLLCFPVDSVLF*FNSRPLVIKFI
Trigger: GATGAACTTGATGACCAGGGGTCTGCTGTTGAACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000591728.1
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 90 bp GGTGGTTCTAGCTTTTGCGGGTGTGTCCTTCTCAGCATAGTACATTaGCAGGTCCCAGTTGATGAAGTGACTCTGTCCAAGACGAATCAC +
Preference number: 6 (lower is better)
Translates to: GGSSFCGCVLLSIVH*QVPVDEVTLSKTNH
Trigger: GTGATTCGTCTTGGACAGAGTCACTTCATCAACTGGGACCTGCAAATGTACTATGCTGAGAAGGACACACCCGCAAAAGCTAGAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588255.1
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 72 bp AGCTTTTGCGGGTGTGTCCTTCTCAGCATAGTACATTaGCAGGTCCCAGTTGATGAAGTGACTCTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: SFCGCVLLSIVH*QVPVDEVTLSK
Trigger: CTTGGACAGAGTCACTTCATCAACTGGGACCTGCAAATGTACTATGCTGAGAAGGACACACCCGCAAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588255.1
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 90 bp CAGATATCGGAACTGAGCAAAGGAATAGTCACTCGACATGACAGCTaGCATTCCTTCTTGTCCACTTATTCCAACGCCAATGTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: QISELSKGIVTRHDS*HSFLSTYSNANVGR
Trigger: CCTGCCCACATTGGCGTTGGAATAAGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAGTGACTATTCCTTTGCTCAGTTCCGATATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642462.1
ENST00000648039.1
CDS CAA 90 bp CAGATATCGGAACTGAGCAAAGGAATAGTCACTCGACATGACAGCTaGCATTCCTTCTTGTCCACTTATTCCAACGCCAATGTGGGCAGT +
Preference number: 6 (lower is better)
Translates to: QISELSKGIVTRHDS*HSFLSTYSNANVGS
Trigger: ACTGCCCACATTGGCGTTGGAATAAGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAGTGACTATTCCTTTGCTCAGTTCCGATATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS GCA 72 bp GCATTATTCTTTTCTGAATGGCTCCCGGTTCTCCTCTaGTTCCCTGTTGACTCGGTTTTGTTCTGGTTCAAC +
Preference number: 6 (lower is better)
Translates to: ALFFSEWLPVLL*FPVDSVLFWFN
Trigger: GTTGAACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAGCCATTCAGAAAAGAATAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591728.1
CDS GCA 72 bp TGTACATTCTTTTCTGAATGGCTCCCGGTTCTCCTCTaGTTCCCTGTTGACTCGGTTTTGTTCTGGTTCAAC +
Preference number: 6 (lower is better)
Translates to: CTFFSEWLPVLL*FPVDSVLFWFN
Trigger: GTTGAACCAGAACAAAACCGAGTCAACAGGGAAGCAGAGGAGAACCGGGAGCCATTCAGAAAAGAATGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS GCA 72 bp GGTTGTTCGTGGTACTTGCGATCGTTTGCTTTGACTTaGCATGTACATTCTTTTCTGAATGGCTCCCGGTTC +
Preference number: 6 (lower is better)
Translates to: GCSWYLRSFALT*HVHSFLNGSRF
Trigger: GAACCGGGAGCCATTCAGAAAAGAATGTACATGGCAAGTCAAAGCAAACGATCGCAAGTACCACGAACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 90 bp GCAACTTTGAACCTGCCATCCTTAATGACTTCACACGTCCTATTGTaGATTTCCTTATCCATTTTATGGCGAGCCACATCGTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: ATLNLPSLMTSHVLL*ISLSILWRATSSTR
Trigger: CCTGGTGGACGATGTGGCTCGCCATAAAATGGATAAGGAAATCAACAATAGGACGTGTGAAGTCATTAAGGATGGCAGGTTCAAAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000589147.5
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 72 bp AGGTTGTTCGTGGTACTTGCGATCGTTTGCTTTGACTaGCCATGTACATTCTTTTCTGAATGGCTCCCGGTT +
Preference number: 6 (lower is better)
Translates to: RLFVVLAIVCFD*PCTFFSEWLPV
Trigger: AACCGGGAGCCATTCAGAAAAGAATGTACATGGCAAGTCAAAGCAAACGATCGCAAGTACCACGAACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 90 bp CTGAGCAAAGGAATAGTCACTCGACATGACAGCTTGCATTCCTTCTaGTCCACTTATTCCAACGCCAATGTGGGCAGTTTTGATCATGTT +
Preference number: 6 (lower is better)
Translates to: LSKGIVTRHDSLHSF*STYSNANVGSFDHV
Trigger: AACATGATCAAAACTGCCCACATTGGCGTTGGAATAAGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAGTGACTATTCCTTTGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648908.2
CDS CCA 72 bp TTGACTCGGTTTTGTTCTGGTTCAACAGCAGACCCCTaGTCATCAAGTTCATCTTCTGTTTCATCATCACTG +
Preference number: 6 (lower is better)
Translates to: LTRFCSGSTADP*SSSSSSVSSSL
Trigger: CAGTGATGATGAAACAGAAGATGAACTTGATGACCAGGGGTCTGCTGTTGAACCAGAACAAAACCGAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000591728.1
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CCA 72 bp ATTTTAGTGTCAGCACCTGCAAAAATGACTAAGCCGTaGCAGAAATCGGTGTTCCTAATTACACAGCCACGT +
Preference number: 6 (lower is better)
Translates to: ILVSAPAKMTKP*QKSVFLITQPR
Trigger: ACGTGGCTGTGTAATTAGGAACACCGATTTCTGCCACGGCTTAGTCATTTTTGCAGGTGCTGACACTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 72 bp GAACTGAGCAAAGGAATAGTCACTCGACATGACAGCTaGCATTCCTTCTTGTCCACTTATTCCAACGCCAAT +
Preference number: 6 (lower is better)
Translates to: ELSKGIVTRHDS*HSFLSTYSNAN
Trigger: ATTGGCGTTGGAATAAGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAGTGACTATTCCTTTGCTCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS CAA 90 bp TTAGCAACTTTGAACCTGCCATCCTTAATGACTTCACACGTCCTATaGTTGATTTCCTTATCCATTTTATGGCGAGCCACATCGTCCACC +
Preference number: 6 (lower is better)
Translates to: LATLNLPSLMTSHVL*LISLSILWRATSST
Trigger: GGTGGACGATGTGGCTCGCCATAAAATGGATAAGGAAATCAACAATAGGACGTGTGAAGTCATTAAGGATGGCAGGTTCAAAGTTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000589147.5
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS TCA 72 bp GATATCGGAACTGAGCAAAGGAATAGTCACTCGACATaGCAGCTTGCATTCCTTCTTGTCCACTTATTCCAA +
Preference number: 6 (lower is better)
Translates to: DIGTEQRNSHST*QLAFLLVHLFQ
Trigger: TTGGAATAAGTGGACAAGAAGGAATGCAAGCTGTCATGTCGAGTGACTATTCCTTTGCTCAGTTCCGATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS CAA 90 bp AGAGAGCTCGGATACGAGTGGCAAGTAGTAGAGATTTTATTCTCATaGTACAGACGAGAGCAAGCTGCTTATTTACTGCTATGGTCTGAA +
Preference number: 6 (lower is better)
Translates to: RELGYEWQVVEILFS*YRREQAAYLLLWSE
Trigger: TTCAGACCATAGCAGTAAATAAGCAGCTTGCTCTCGTCTGTACAATGAGAATAAAATCTCTACTACTTGCCACTCGTATCCGAGCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588255.1
CDS GCA 72 bp TCTCATTGTACAGACGAGAGCAAGCTGCTTATTTACTaGTATGGTCTGAATGTTAGAATCCCCCTCCAAATT +
Preference number: 6 (lower is better)
Translates to: SHCTDESKLLIY*YGLNVRIPLQI
Trigger: AATTTGGAGGGGGATTCTAACATTCAGACCATAGCAGTAAATAAGCAGCTTGCTCTCGTCTGTACAATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588255.1
CDS GCA 72 bp GGTTGTTCGTGGTACTTGCGATCGTTTGCTTTGACTTaGCATGTACATTATAAGGTACTCTTGAATCCATTC +
Preference number: 6 (lower is better)
Translates to: GCSWYLRSFALT*HVHYKVLLNPF
Trigger: GAATGGATTCAAGAGTACCTTATAATGTACATGGCAAGTCAAAGCAAACGATCGCAAGTACCACGAACAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589147.5
CDS GCA 72 bp CATAAAGTGAGGTTGTTCGTGGTACTTGCGATCGTTTaGTTTGACTTGCCATGTACATTCTTTTCTGAATGG +
Preference number: 6 (lower is better)
Translates to: HKVRLFVVLAIV*FDLPCTFFSEW
Trigger: CCATTCAGAAAAGAATGTACATGGCAAGTCAAAGCAAACGATCGCAAGTACCACGAACAACCTCACTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 72 bp TTGAACCTGCCATCCTTAATGACTTCACACGTCCTATaGTTGATTTCCTTATCCATTTTATGGCGAGCCACA +
Preference number: 6 (lower is better)
Translates to: LNLPSLMTSHVL*LISLSILWRAT
Trigger: TGTGGCTCGCCATAAAATGGATAAGGAAATCAACAATAGGACGTGTGAAGTCATTAAGGATGGCAGGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000589147.5
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 90 bp GAGTCTCTTTCTGTACTCATTCTGCTGGCAAATTGGAACTACCTTTaGGTGTTCACATCTTTAATTTCCTGTGAGTGTGGCATACACATG +
Preference number: 6 (lower is better)
Translates to: ESLSVLILLANWNYL*VFTSLISCECGIHM
Trigger: CATGTGTATGCCACACTCACAGGAAATTAAAGATGTGAACACCAAAAGGTAGTTCCAATTTGCCAGCAGAATGAGTACAGAAAGAGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585322.2
CDS TCA 72 bp GAACTACCTTTTGGTGTTCACATCTTTAATTTCCTGTaGGTGTGGCATACACATGAGGTGGTTTGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: ELPFGVHIFNFL*VWHTHEVVCFF
Trigger: AAAGAAGCAAACCACCTCATGTGTATGCCACACTCACAGGAAATTAAAGATGTGAACACCAAAAGGTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585322.2
CDS TCA 72 bp CAAGAAGAAGAACTGTCGTACTTCTGGCTCTTTCCCTaGCTGGATTTGCTCAATAAGATAGTGGTCATAAAA +
Preference number: 6 (lower is better)
Translates to: QEEELSYFWLFP*LDLLNKIVVIK
Trigger: TTTTATGACCACTATCTTATTGAGCAAATCCAGTCAGGGAAAGAGCCAGAAGTACGACAGTTCTTCTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CAA 72 bp GGATACGAGTGGCAAGTAGTAGAGATTTTATTCTCATaGTACAGACGAGAGCAAGCTGCTTATTTACTGCTA +
Preference number: 6 (lower is better)
Translates to: GYEWQVVEILFS*YRREQAAYLLL
Trigger: TAGCAGTAAATAAGCAGCTTGCTCTCGTCTGTACAATGAGAATAAAATCTCTACTACTTGCCACTCGTATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588255.1
CDS TCA 72 bp CTCTCCTTAATACACAAGAATTTTGTGTTCATAAAGTaGGGTTGTTCGTGGTACTTGCGATCGTTTGCTTTG +
Preference number: 6 (lower is better)
Translates to: LSLIHKNFVFIK*GCSWYLRSFAL
Trigger: CAAAGCAAACGATCGCAAGTACCACGAACAACCTCACTTTATGAACACAAAATTCTTGTGTATTAAGGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000589147.5
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2
CDS CCA 72 bp CAGAAGATTATTTTCCGTAGAGAGCTCGGATACGAGTaGCAAGTAGTAGAGATTTTATTCTCATTGTACAGA +
Preference number: 6 (lower is better)
Translates to: QKIIFRRELGYE*QVVEILFSLYR
Trigger: TCTGTACAATGAGAATAAAATCTCTACTACTTGCCACTCGTATCCGAGCTCTCTACGGAAAATAATCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588255.1
CDS CAA 90 bp TCTTCTTCTGTTCTTGGGAACTTCAGCTTCAGAATCTTATTTCTCTaGGTCTTTTTCTCGAGAAGAATTTCATTCAACCAAGAACCAGTG +
Preference number: 6 (lower is better)
Translates to: SSSVLGNFSFRILFL*VFFSRRISFNQEPV
Trigger: CACTGGTTCTTGGTTGAATGAAATTCTTCTCGAGAAAAAGACCAAGAGAAATAAGATTCTGAAGCTGAAGTTCCCAAGAACAGAAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648908.2
CDS CCA 72 bp ATAAAACCATCAAATGTAGCCAATGTATCTTCTCTTTaGAGGTACTGGTCTGTGATTTCAAGTGACATCTTA +
Preference number: 6 (lower is better)
Translates to: IKPSNVANVSSL*RYWSVISSDIL
Trigger: TAAGATGTCACTTGAAATCACAGACCAGTACCTCCAAAGAGAAGATACATTGGCTACATTTGATGGTTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642462.1
ENST00000648039.1
ENST00000648467.1
ENST00000648908.2