RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP8A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132932

Ensembl transcript IDs: ENST00000281620.10, ENST00000281620.11, ENST00000381648.7, ENST00000381655.7, ENST00000491840.1, ENST00000682472.1, ENST00000682580.1, ENST00000682942.1, ENST00000682943.1, ENST00000683303.1, ENST00000683455.1, ENST00000683461.1, ENST00000683845.1, ENST00000683868.1, ENST00000683945.1, ENST00000683960.1, ENST00000684025.1, ENST00000684283.1, ENST00000684424.1, ENST00000684551.1

Found 627 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGCAGGTGTGGGGGTGAGGGGCGCCTGGACACGGCGGCAGGACTaGGCCGAGTGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGC +
Preference number: 1 (lower is better)
Translates to: AAGVGVRGAWTRRQD*AECTWRGCGRLFQG
Trigger: GCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCACTCGGCCCAGTCCTGCCGCCGTGTCCAGGCGCCCCTCACCCCCACACCTGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp TTGGCTGCCCATCGGCCGCCATGCACTGAGTGGTGTGGCCAGCCATaGAGCAGGTGTGGGGGTGAGGGGCGCCTGGACACGGCGGCAGGA +
Preference number: 1 (lower is better)
Translates to: LAAHRPPCTEWCGQP*SRCGGEGRLDTAAG
Trigger: TCCTGCCGCCGTGTCCAGGCGCCCCTCACCCCCACACCTGCTGCATGGCTGGCCACACCACTCAGTGCATGGCGGCCGATGGGCAGCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp AGGCGCGGGTTTGGGTTGGCTGCCCATCGGCCGCCATGCACTGAGTaGTGTGGCCAGCCATGCAGCAGGTGTGGGGGTGAGGGGCGCCTG +
Preference number: 1 (lower is better)
Translates to: RRGFGLAAHRPPCTE*CGQPCSRCGGEGRL
Trigger: CAGGCGCCCCTCACCCCCACACCTGCTGCATGGCTGGCCACACCACTCAGTGCATGGCGGCCGATGGGCAGCCAACCCAAACCCGCGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp AGCTGCCCCGGAACAGCGTCGGGGGCGTCTTCCGGCCCAGCCTCTTaGTCAGGCGGTCGCGCTCGTTCAGCCTCTTTCCATTGCTATCCC +
Preference number: 1 (lower is better)
Translates to: SCPGTASGASSGPAS*SGGRARSASFHCYP
Trigger: GGGATAGCAATGGAAAGAGGCTGAACGAGCGCGACCGCCTGATCAAGAGGCTGGGCCGGAAGACGCCCCCGACGCTGTTCCGGGGCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR GCA 90 bp CTGCCTGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTaGACAGGCCTGAACTTGGCCATCTCGGGCAACGGGGGAGAGTGG +
Preference number: 1 (lower is better)
Translates to: LPAWPLRGRLRGKRH*TGLNLAISGNGGEW
Trigger: CCACTCTCCCCCGTTGCCCGAGATGGCCAAGTTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp GCCTGGACACGGCGGCAGGACTGGGCCGAGTGCACCTGGAGAGGGTaGGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGCTGGAA +
Preference number: 1 (lower is better)
Translates to: AWTRRQDWAECTWRG*GRLFQGISWFALLE
Trigger: TTCCAGCAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCACTCGGCCCAGTCCTGCCGCCGTGTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp CAAAGGCCCAGCAGTCTGGATGTTGGGAAGGGAGTATTCAGAGCCTaGCCACGGCTGGGAGTCCTGAAGGGGTTCTACCACCACTCTGAC +
Preference number: 1 (lower is better)
Translates to: QRPSSLDVGKGVFRA*PRLGVLKGFYHHSD
Trigger: GTCAGAGTGGTGGTAGAACCCCTTCAGGACTCCCAGCCGTGGTCAGGCTCTGAATACTCCCTTCCCAACATCCAGACTGCTGGGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp TGGCGTAATCCGAGTTGTTGGTGGCCTGCATGCCTTCATTCCCACTaGTTCCCACACCCACGTGGGCTGTCTGGATCATCCCGACATCGT +
Preference number: 1 (lower is better)
Translates to: WRNPSCWWPACLHSH*FPHPRGLSGSSRHR
Trigger: ACGATGTCGGGATGATCCAGACAGCCCACGTGGGTGTGGGAATCAGTGGGAATGAAGGCATGCAGGCCACCAACAACTCGGATTACGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR CCA 90 bp GGCGGTGGAAGAAGGAATTTTTCGCATCTGTATCTGAGTCTGCAGTaGAACAAGGAAAGGCGCGGGTTTGGGTTGGCTGCCCATCGGCCG +
Preference number: 1 (lower is better)
Translates to: GGGRRNFSHLYLSLQ*NKERRGFGLAAHRP
Trigger: CGGCCGATGGGCAGCCAACCCAAACCCGCGCCTTTCCTTGTTCCACTGCAGACTCAGATACAGATGCGAAAAATTCCTTCTTCCACCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp ACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTaGGTGGATTCTGCCAGTTTAGCTCAATCCAGAGTCAGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: TGLGCLYTAVDQGLA*VDSASLAQSRVRPW
Trigger: CCAGGGCCTGACTCTGGATTGAGCTAAACTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp CCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGCTACCCTTaGTGGCACGTGTCAGTGTGCAGTGGAAACCCAGAACTAAGCCCA +
Preference number: 1 (lower is better)
Translates to: PDYSALLIRVFHSYP*WHVSVCSGNPELSP
Trigger: TGGGCTTAGTTCTGGGTTTCCACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp GACTACTCTGCTCTCCTGATACGTGTTTTCCACAGCTACCCTTGCTaGCACGTGTCAGTGTGCAGTGGAAACCCAGAACTAAGCCCACAG +
Preference number: 1 (lower is better)
Translates to: DYSALLIRVFHSYPC*HVSVCSGNPELSPQ
Trigger: CTGTGGGCTTAGTTCTGGGTTTCCACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp CAACAGACTCCAATCCCATTGGAAGTGAGTTCGCAGCCTGCTCTCTaGGCTCTCTCCCTCTTTCCGGCCTTTTCTCTTTCACACGGAAGA +
Preference number: 1 (lower is better)
Translates to: QQTPIPLEVSSQPAL*ALSLFPAFSLSHGR
Trigger: TCTTCCGTGTGAAAGAGAAAAGGCCGGAAAGAGGGAGAGAGCCCAGAGAGCAGGCTGCGAACTCACTTCCAATGGGATTGGAGTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp AGAACGAGAAGGGCGGTGGAAGAAGGAATTTTTCGCATCTGTATCTaGGTCTGCAGTGGAACAAGGAAAGGCGCGGGTTTGGGTTGGCTG +
Preference number: 1 (lower is better)
Translates to: RTRRAVEEGIFRICI*VCSGTRKGAGLGWL
Trigger: CAGCCAACCCAAACCCGCGCCTTTCCTTGTTCCACTGCAGACTCAGATACAGATGCGAAAAATTCCTTCTTCCACCGCCCTTCTCGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp ACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTaGTCTCCTGATACGTGTTTTCCACAGCTACCCTTGCTGGCACGT +
Preference number: 1 (lower is better)
Translates to: TEPVLISTEYSSRLL*SPDTCFPQLPLLAR
Trigger: ACGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp CTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGTaGCGATTCCTCTGTGTCCTCCTCTCAGTGTCTCCGTGTCCTTCC +
Preference number: 1 (lower is better)
Translates to: LGLKAYFRVSTAKIW*RFLCVLLSVSPCPS
Trigger: GGAAGGACACGGAGACACTGAGAGGAGGACACAGAGGAATCGCCACCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp CCTGCCTACAGTGAAGTCTGCATGTGGCCCGTTGGACTTAACCTCTaGGTTAACTCAACAGGAAGCAAGTGTGCCCTGCTCCAATTACAC +
Preference number: 1 (lower is better)
Translates to: PAYSEVCMWPVGLNL*VNSTGSKCALLQLH
Trigger: GTGTAATTGGAGCAGGGCACACTTGCTTCCTGTTGAGTTAACTCAGAGGTTAAGTCCAACGGGCCACATGCAGACTTCACTGTAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp TGGAAACCCAGAACTAAGCCCACAGTACAACTGGTCTCTTCCTTTTaGAGGGTCATCCAGGAGAAGAGAGACTCAACACAGGACTGGGCT +
Preference number: 1 (lower is better)
Translates to: WKPRTKPTVQLVSSF*RVIQEKRDSTQDWA
Trigger: AGCCCAGTCCTGTGTTGAGTCTCTCTTCTCCTGGATGACCCTGCAAAAGGAAGAGACCAGTTGTACTGTGGGCTTAGTTCTGGGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp CTGATACGTGTTTTCCACAGCTACCCTTGCTGGCACGTGTCAGTGTaGAGTGGAAACCCAGAACTAAGCCCACAGTACAACTGGTCTCTT +
Preference number: 1 (lower is better)
Translates to: LIRVFHSYPCWHVSV*SGNPELSPQYNWSL
Trigger: AAGAGACCAGTTGTACTGTGGGCTTAGTTCTGGGTTTCCACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp GAGTGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTaGTTTGCCCTGCTGGAAATGTGGCTAAGAGGTTCAAATAAATGT +
Preference number: 1 (lower is better)
Translates to: ECTWRGCGRLFQGIS*FALLEMWLRGSNKC
Trigger: ACATTTATTTGAACCTCTTAGCCACATTTCCAGCAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp CGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTaGTACGTGTTTTCCACAGCTACCCTTGCTGGCACGTGTCAGTGT +
Preference number: 1 (lower is better)
Translates to: RSDQHRVFIQTTLLS*YVFSTATLAGTCQC
Trigger: ACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp GGTACAACACATCGAGCGTGCTGGTCTGTTAACACCTTTCAAGAATaGCTAATGATGTCATTATGGGGGTCTTGGGCCCTCACCTCCGAA +
Preference number: 1 (lower is better)
Translates to: GTTHRACWSVNTFQE*LMMSLWGSWALTSE
Trigger: TTCGGAGGTGAGGGCCCAAGACCCCCATAATGACATCATTAGGCATTCTTGAAAGGTGTTAACAGACCAGCACGCTCGATGTGTTGTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp AAGAATACAACAGACTCCAATCCCATTGGAAGTGAGTTCGCAGCCTaGTCTCTGGGCTCTCTCCCTCTTTCCGGCCTTTTCTCTTTCACA +
Preference number: 1 (lower is better)
Translates to: KNTTDSNPIGSEFAA*SLGSLPLSGLFSFT
Trigger: TGTGAAAGAGAAAAGGCCGGAAAGAGGGAGAGAGCCCAGAGAGCAGGCTGCGAACTCACTTCCAATGGGATTGGAGTCTGTTGTATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp GGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGCTGGAAATGTaGCTAAGAGGTTCAAATAAATGTTCTCAGGTTGACCACCCCGAT +
Preference number: 1 (lower is better)
Translates to: GRLFQGISWFALLEM*LRGSNKCSQVDHPD
Trigger: ATCGGGGTGGTCAACCTGAGAACATTTATTTGAACCTCTTAGCCACATTTCCAGCAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp TCACCAGTAACAGTTGCCCACAAGTATTTAGGCCATCCAAAAATCTaGTTTGGCAACCAGAGCAGAGAACAGGGCTCCAGGCAGGTTGTT +
Preference number: 1 (lower is better)
Translates to: SPVTVAHKYLGHPKI*FGNQSREQGSRQVV
Trigger: AACAACCTGCCTGGAGCCCTGTTCTCTGCTCTGGTTGCCAAACCAGATTTTTGGATGGCCTAAATACTTGTGGGCAACTGTTACTGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp GCCAGCCTGGGTGTAAAAAGAATCCCTCTTTTGTCTCTCCTCAGTTaGGAGAGCCGAGGTGTTCCTCAGAGGTTAACACTGGATTATACA +
Preference number: 1 (lower is better)
Translates to: ASLGVKRIPLLSLLS*ESRGVPQRLTLDYT
Trigger: TGTATAATCCAGTGTTAACCTCTGAGGAACACCTCGGCTCTCCCAACTGAGGAGAGACAAAAGAGGGATTCTTTTTACACCCAGGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp ATGGGTGAACATAACCCTGGTCAAGAAGCCTGGAATATTCTGCACTaGGGCAGGACAGACACATCAGCTCCACTCCTAAATTATGACCGA +
Preference number: 1 (lower is better)
Translates to: MGEHNPGQEAWNILH*GRTDTSAPLLNYDR
Trigger: TCGGTCATAATTTAGGAGTGGAGCTGATGTGTCTGTCCTGCCTCAGTGCAGAATATTCCAGGCTTCTTGACCAGGGTTATGTTCACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp CTTTTCTGCTCCCATTTGTTTGTGGCTTCTGCCCATTCAGATTTATaGTGGCTCAATGCCCTTTTCTCCTCACTCAGGGTTACATCCCAG +
Preference number: 1 (lower is better)
Translates to: LFCSHLFVASAHSDL*WLNALFSSLRVTSQ
Trigger: CTGGGATGTAACCCTGAGTGAGGAGAAAAGGGCATTGAGCCAGCATAAATCTGAATGGGCAGAAGCCACAAACAAATGGGAGCAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp GTCACAAGAACTGCCTATGGGCTAATCTTGAGAGCATGTTTTTCTTaGTCTGAGGCCTGGGAGAAAGAGCAGAGTGGATATCTCAAAGGC +
Preference number: 1 (lower is better)
Translates to: VTRTAYGLILRACFS*SEAWEKEQSGYLKG
Trigger: GCCTTTGAGATATCCACTCTGCTCTTTCTCCCAGGCCTCAGACCAAGAAAAACATGCTCTCAAGATTAGCCCATAGGCAGTTCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp ACAAACTGCTTGGCTAAGGCCACAGAAATGTGTTTCCTGGTGTTTTaGCTGCTGACGCCAGTCTTCTCTGACAAAGATGTGTTAACACTG +
Preference number: 1 (lower is better)
Translates to: TNCLAKATEMCFLVF*LLTPVFSDKDVLTL
Trigger: CAGTGTTAACACATCTTTGTCAGAGAAGACTGGCGTCAGCAGCCAAAACACCAGGAAACACATTTCTGTGGCCTTAGCCAAGCAGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281620.10
ENST00000381655.7
3UTR CCA 90 bp AGTAACAGTTGCCCACAAGTATTTAGGCCATCCAAAAATCTGGTTTaGCAACCAGAGCAGAGAACAGGGCTCCAGGCAGGTTGTTTAGTA +
Preference number: 1 (lower is better)
Translates to: SNSCPQVFRPSKNLV*QPEQRTGLQAGCLV
Trigger: TACTAAACAACCTGCCTGGAGCCCTGTTCTCTGCTCTGGTTGCCAAACCAGATTTTTGGATGGCCTAAATACTTGTGGGCAACTGTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp AGAAATGTGTTTCCTGGTGTTTTGGCTGCTGACGCCAGTCTTCTCTaGCAAAGATGTGTTAACACTGGGTGCAACAAACTGAATCTCTTT +
Preference number: 1 (lower is better)
Translates to: RNVFPGVLAADASLL*QRCVNTGCNKLNLF
Trigger: AAAGAGATTCAGTTTGTTGCACCCAGTGTTAACACATCTTTGTCAGAGAAGACTGGCGTCAGCAGCCAAAACACCAGGAAACACATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281620.10
ENST00000381655.7
3UTR CCA 90 bp ATCTTGGCCATCACCTTTCTGGGTGTGCAAAGAAACCATACACCTTaGTTTGTCGTGTTAGTCATAGGCACATTTTGTGTTAGAGTTCCT +
Preference number: 1 (lower is better)
Translates to: ILAITFLGVQRNHTP*FVVLVIGTFCVRVP
Trigger: AGGAACTCTAACACAAAATGTGCCTATGACTAACACGACAAACCAAGGTGTATGGTTTCTTTGCACACCCAGAAAGGTGATGGCCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp GTTATTACTGATTTTCACAGCCAGCTCCCTATAGTGAGACGAACCTaGAGCCTTGTCAAGGGAAAGAAAATGTCAACAGAATTCTCAGCT +
Preference number: 1 (lower is better)
Translates to: VITDFHSQLPIVRRT*SLVKGKKMSTEFSA
Trigger: AGCTGAGAATTCTGTTGACATTTTCTTTCCCTTGACAAGGCTTCAGGTTCGTCTCACTATAGGGAGCTGGCTGTGAAAATCAGTAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 90 bp CACAAATCACTAAATTCTCCCAAAACTTCTAAAAATACAAGTAGATaGCCTCCGTTTGTATTCACTCCAGGAGGGAACCCAGTGCACTGT +
Preference number: 1 (lower is better)
Translates to: HKSLNSPKTSKNTSR*PPFVFTPGGNPVHC
Trigger: ACAGTGCACTGGGTTCCCTCCTGGAGTGAATACAAACGGAGGGCATCTACTTGTATTTTTAGAAGTTTTGGGAGAATTTAGTGATTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 90 bp GAAAGGCTATGTTTCTTTTCTTTCTTTACAGAACGAGAAGGGCGGTaGAAGAAGGAATTTTTCGCATCTGTATCTGAGTCTGCAGTGGAA +
Preference number: 1 (lower is better)
Translates to: ERLCFFSFFTEREGR*KKEFFASVSESAVE
Trigger: TTCCACTGCAGACTCAGATACAGATGCGAAAAATTCCTTCTTCCACCGCCCTTCTCGTTCTGTAAAGAAAGAAAAGAAACATAGCCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 90 bp CCAGTCTTCTCTGACAAAGATGTGTTAACACTGGGTGCAACAAACTaGATCTCTTTCCTAAGATCAGTCAGGAAAATTCATGTCTTATTT +
Preference number: 1 (lower is better)
Translates to: PVFSDKDVLTLGATN*ISFLRSVRKIHVLF
Trigger: AAATAAGACATGAATTTTCCTGACTGATCTTAGGAAAGAGATTCAGTTTGTTGCACCCAGTGTTAACACATCTTTGTCAGAGAAGACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR TCA 90 bp CTGCTGCAGGGAGCTGCCCCGGAACAGCGTCGGGGGCGTCTTCCGGCCCAGCCTTGCCTTCATTCCCACTaGTTCCCACACCCACGTGGG +
Preference number: 2 (lower is better)
Translates to: LLQGAAPEQRRGRLPAQPCLHSH*FPHPRG
Trigger: CCCACGTGGGTGTGGGAATCAGTGGGAATGAAGGCA...AGGCTGGGCCGGAAGACGCCCCCGACGCTGTTCCGGGGCAGCTCCCTGCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR CAA 90 bp GAGCTGCCCCGGAACAGCGTCGGGGGCGTCTTCCGGCCCAGCCTCTaGATCAGGCGGTCGCGCTCGTTCAGCCTCTTTCCATTGCTATCC +
Preference number: 2 (lower is better)
Translates to: ELPRNSVGGVFRPSL*IRRSRSFSLFPLLS
Trigger: GGATAGCAATGGAAAGAGGCTGAACGAGCGCGACCGCCTGATCAAGAGGCTGGGCCGGAAGACGCCCCCGACGCTGTTCCGGGGCAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR CAA 90 bp GCTGCCTGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATaGCACAGGCCTGAACTTGGCCATCTCGGGCAACGGGGGAGAGTG +
Preference number: 2 (lower is better)
Translates to: AACVALEREAQREAA*HRPELGHLGQRGRV
Trigger: CACTCTCCCCCGTTGCCCGAGATGGCCAAGTTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCAGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp CTTGAGAAAAAGCATACCCATGCGGGACGCCCTGCTGCAGGGAGCTGCCCCGGATCCGGCCCAGCCTCTTaGTCAGGCGGTCGCGCTCGT +
Preference number: 2 (lower is better)
Translates to: LEKKHTHAGRPAAGSCPGSGPAS*SGGRAR
Trigger: ACGAGCGCGACCGCCTGATCAAGAGGCTGGGCCGGA...TCCGGGGCAGCTCCCTGCAGCAGGGCGTCCCGCATGGGTATGCTTTTTCTCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR GCA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAAGCCCATCGGCCGCCATaGACTGAGTGGTGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: CVALEREAQREAALHRPEAHRPP*TEWCGQ
Trigger: CTGGCCACACCACTCAGTGCATGGCGGCCGATGGGC...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp GGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTGCCAGGGGGTGAGGGGCGCCTaGACACGGCGGCAGGACTGG +
Preference number: 2 (lower is better)
Translates to: GLSVHSSRPRVGLSGFCQGVRGA*TRRQDW
Trigger: CCAGTCCTGCCGCCGTGTCCAGGCGCCCCTCACCCC...CTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp CTGTATCTGAGTCTGCAGTGGAACAAGGAAAGGCGCGGGTTTGGGTaGGCTGCCCATCGGCCGCCATGCACTGAGTGGTGTGGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: LYLSLQWNKERRGFG*AAHRPPCTEWCGQP
Trigger: TGGCTGGCCACACCACTCAGTGCATGGCGGCCGATGGGCAGCCAACCCAAACCCGCGCCTTTCCTTGTTCCACTGCAGACTCAGATACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGTGGGCCGAGTGCACCTaGAGAGGGTGCGGAAGACTC +
Preference number: 2 (lower is better)
Translates to: FAELTASVCNLVQSTLPQWAECT*RGCGRL
Trigger: GAGTCTTCCGCACCCTCTCCAGGTGCACTCGGCCCA...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGGGCGCGGGTTTGGGTTaGCTGCCCATCGGCCGCCAT +
Preference number: 2 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLGAGLG*LPIGRH
Trigger: ATGGCGGCCGATGGGCAGCCAACCCAAACCCGCGCC...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp GTTGGTGGCCTGCATGCCTTCATTCCCACTGATTCCCACACCCACGTGGGCTGTTCATCCCGACATCGTTaGCGCCGTCTCCGATGGCGA +
Preference number: 2 (lower is better)
Translates to: VGGLHAFIPTDSHTHVGCSSRHR*RRLRWR
Trigger: TCGCCATCGGAGACGGCGCCAACGATGTCGGGATGA...ACAGCCCACGTGGGTGTGGGAATCAGTGGGAATGAAGGCATGCAGGCCACCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR TCA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAATGGTGTTTTGGCTGCTaGCGCCAGTCTTCTCTGACA +
Preference number: 2 (lower is better)
Translates to: CVALEREAQREAALHRPEWCFGC*RQSSLT
Trigger: TGTCAGAGAAGACTGGCGTCAGCAGCCAAAACACCA...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCCGGGTTTGGGTTGGCTaGCCATCGGCCGCCATGCAC +
Preference number: 2 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSRVWVG*PSAAMH
Trigger: GTGCATGGCGGCCGATGGGCAGCCAACCCAAACCCG...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp AGGCGGTCGCGCTCGTTCAGCCTCTTTCCATTGCTATCCCGCAGCACCGCTTTTGCAGGTGTGCTTGGCTaGTCTCCATGCCACATCTTC +
Preference number: 2 (lower is better)
Translates to: RRSRSFSLFPLLSRSTAFAGVLG*SPCHIF
Trigger: GAAGATGTGGCATGGAGAGCAGCCAAGCACACCTGC...AAAAGCGGTGCTGCGGGATAGCAATGGAAAGAGGCTGAACGAGCGCGACCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR GCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGTGCACCTGGAGAGGGTaGGGAAGACTCTTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLCTWRG*GRLFQG
Trigger: GCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGCAGCAGGTGTGGGGGTaGGGGGCGCCTGGACACGGC +
Preference number: 2 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWQQVWG*GAPGHG
Trigger: GCCGTGTCCAGGCGCCCCTCACCCCCACACCTGCTG...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAAAACAGGAAGCAAGTGTaGCCTGCTCCAATTACACAG +
Preference number: 2 (lower is better)
Translates to: CVALEREAQREAALHRPENRKQV*PAPITQ
Trigger: CTGTGTAATTGGAGCAGGGCACACTTGCTTCCTGTT...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp GGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTGCCAGCTGACAGCCAGCGTATaGAACCTAGTCCAGTCCACC +
Preference number: 2 (lower is better)
Translates to: GLSVHSSRPRVGLSGFCQLTASV*NLVQST
Trigger: GGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAG...CTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACGGAAAGGCGCGGGTTTaGGTTGGCTGCCCATCGGCC +
Preference number: 2 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNGKARV*VGCPSA
Trigger: GGCCGATGGGCAGCCAACCCAAACCCGCGCCTTTCC...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp AGTATCATGCTCCAGAGCTTTCATGGGAAACCAGAAGAGGATGAGGGAGTGGACCTCCGATGGCGAGGGTaGTGGCCTTCACCCGCTTCT +
Preference number: 2 (lower is better)
Translates to: SIMLQSFHGKPEEDEGVDLRWRG*WPSPAS
Trigger: AGAAGCGGGTGAAGGCCATCACCCTCGCCATCGGAG...GTCCACTCCCTCATCCTCTTCTGGTTTCCCATGAAAGCTCTGGAGCATGATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR TCA 90 bp AGGCGGTCGCGCTCGTTCAGCCTCTTTCCATTGCTATCCCGCAGCACCGCTTTTAAGGCGTTGATGCAGTaGCCCCAGAAAACCTTTGTG +
Preference number: 2 (lower is better)
Translates to: RRSRSFSLFPLLSRSTAFKALMQ*PQKTFV
Trigger: CACAAAGGTTTTCTGGGGTCACTGCATCAACGCCTT...AAAAGCGGTGCTGCGGGATAGCAATGGAAAGAGGCTGAACGAGCGCGACCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR GCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGGAAGCAAGTGTGCCCTaGTCCAATTACACAGGATGG +
Preference number: 2 (lower is better)
Translates to: FAELTASVCNLVQSTLPQEASVP*SNYTGW
Trigger: CCATCCTGTGTAATTGGAGCAGGGCACACTTGCTTC...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTACACGGCGGCAGGACTaGGCCGAGTGCACCTGGAGA +
Preference number: 2 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSTRRQD*AECTWR
Trigger: TCTCCAGGTGCACTCGGCCCAGTCCTGCCGCCGTGT...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp ACGTGGCTTTGCTCGCATGAGAAAGACGCCACAAAGATGATGCATTaGAACGACAATTCAGTGACCGGCAGCCCCATCCTGCAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: TWLCSHEKDATKMMH*NDNSVTGSPILQLA
Trigger: GGCCAGCTGCAGGATGGGGCTGCCGGTCACTGAATTGTCGTTCAAATGCATCATCTTTGTGGCGTCTTTCTCATGCGAGCAAAGCCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACCACGGCTGGGAGTCCTaGAGGGGTTCTACCACCACT +
Preference number: 2 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNHGWES*RGSTTT
Trigger: AGTGGTGGTAGAACCCCTTCAGGACTCCCAGCCGTG...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCCACAGCTACCCTTGCTaGCACGTGTCAGTGTGCAGT +
Preference number: 2 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSHSYPC*HVSVCS
Trigger: ACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTG...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp TCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGCTACCCTaGCTGGCACGTGTCAGTGTGCAGTGGAAACCCAGAACTAAGCCC +
Preference number: 2 (lower is better)
Translates to: SRLLCSPDTCFPQLP*LARVSVQWKPRTKP
Trigger: GGGCTTAGTTCTGGGTTTCCACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTGGAGTATTCAGAGCCTaGCCACGGCTGGGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSGVFRA*PRLGVL
Trigger: CAGGACTCCCAGCCGTGGTCAGGCTCTGAATACTCC...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGGAATGCTCAACCACATaGGAGGATAGAAAGGCATCT +
Preference number: 2 (lower is better)
Translates to: FAELTASVCNLVQSTLPQECSTT*EDRKAS
Trigger: AGATGCCTTTCTATCCTCTCATGTGGTTGAGCATTC...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTCAGCCCGTGAGTCAGTaGGTGTCTGGCGGAGTGACA +
Preference number: 2 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSQPVSQ*VSGGVT
Trigger: TGTCACTCCGCCAGACACTCACTGACTCACGGGCTG...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCGCACTGCAGACGAGTTaGGAGGGCAAAGATAGCTTC +
Preference number: 2 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSALQTS*EGKDSF
Trigger: GAAGCTATCTTTGCCCTCCCAACTCGTCTGCAGTGC...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGCCGCCATGCACTGAGTaGTGTGGCCAGCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQPPCTE*CGQPCS
Trigger: GCTGCATGGCTGGCCACACCACTCAGTGCATGGCGG...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGCACCACTCTGACCTGTaGGGTGGCCCCATGTCAGAC +
Preference number: 2 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWHHSDL*GGPMSD
Trigger: GTCTGACATGGGGCCACCCCACAGGTCAGAGTGGTG...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp AAGCAGGAGAGCAACCTGCCTACAGTGAAGTCTGCATGTGGCCCGTaGGACTTAACCTCTGAGTTAACTCAACAGGAAGCAAGTGTGCCC +
Preference number: 2 (lower is better)
Translates to: KQESNLPTVKSACGP*DLTSELTQQEASVP
Trigger: GGGCACACTTGCTTCCTGTTGAGTTAACTCAGAGGTTAAGTCCAACGGGCCACATGCAGACTTCACTGTAGGCAGGTTGCTCTCCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGCTGGGTGCAACAAACTaGATCTCTTTCCTAAGATCA +
Preference number: 2 (lower is better)
Translates to: FAELTASVCNLVQSTLPQLGATN*ISFLRS
Trigger: TGATCTTAGGAAAGAGATTCAGTTTGTTGCACCCAG...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTTGGGAAAGTCAGTaGTTCCGCTCTTCACTTCCT +
Preference number: 2 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLSWESQ*FRSSLP
Trigger: AGGAAGTGAAGAGCGGAATCACTGACTTTCCCAACT...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp AAATCTGGTTTGGCAACCAGAGCAGAGAACAGGGCTCCAGGCAGGTaGTTTAGTAAGGGCTCCAGGTGCTCACATTCATGCCTGAAGACA +
Preference number: 2 (lower is better)
Translates to: KSGLATRAENRAPGR*FSKGSRCSHSCLKT
Trigger: TGTCTTCAGGCATGAATGTGAGCACCTGGAGCCCTTACTAAACAACCTGCCTGGAGCCCTGTTCTCTGCTCTGGTTGCCAAACCAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAGAGGATGAGGGAGTaGACCAAGGCGTTGATGCAG +
Preference number: 2 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNKRMRE*TKALMQ
Trigger: CTGCATCAACGCCTTGGTCCACTCCCTCATCCTCTT...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACTATCTGAGTCTGCAGTaGAACAAGGAAAGGCGCGGG +
Preference number: 2 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNYLSLQ*NKERRG
Trigger: CCCGCGCCTTTCCTTGTTCCACTGCAGACTCAGATA...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGAAATGGCCCTTTTTaGAGCCTCACCTGTGAATTG +
Preference number: 2 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLRNGPF*SLTCEL
Trigger: CAATTCACAGGTGAGGCTCCAAAAAGGGCCATTTCT...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp CGCCAGCCTGGGTGTAAAAAGAATCCCTCTTTTGTCTCTCCTCAGTaGGGAGAGCCGAGGTGTTCCTCAGAGGTTAACACTGGATTATAC +
Preference number: 2 (lower is better)
Translates to: RQPGCKKNPSFVSPQ*GEPRCSSEVNTGLY
Trigger: GTATAATCCAGTGTTAACCTCTGAGGAACACCTCGGCTCTCCCAACTGAGGAGAGACAAAAGAGGGATTCTTTTTACACCCAGGCTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAGCCTACAGTGAAGTCTaGATGTGGCCCGTTGGACTT +
Preference number: 2 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKAYSEV*MWPVGL
Trigger: AAGTCCAACGGGCCACATGCAGACTTCACTGTAGGC...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp CTCCATGAACCAACAGAAGCTTCTCTAAGTAGGAAAACTGTGCGATGGCGTAATCCCACGTGGGCTGTCTaGATCATCCCGACATCGTTG +
Preference number: 2 (lower is better)
Translates to: LHEPTEASLSRKTVRWRNPTWAV*IIPTSL
Trigger: CAACGATGTCGGGATGATCCAGACAGCCCACGTGGG...ATTACGCCATCGCACAGTTTTCCTACTTAGAGAAGCTTCTGTTGGTTCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CCA 90 bp CTGACTAACAGCTCCGTGTTCTTCTTGAGAAAAAGCATACCCATGCGGGACGCCAGGAAAACTGTGCGATaGCGTAATCCGAGTTGTTGG +
Preference number: 2 (lower is better)
Translates to: LTNSSVFFLRKSIPMRDARKTVR*RNPSCW
Trigger: CCAACAACTCGGATTACGCCATCGCACAGTTTTCCT...GGCGTCCCGCATGGGTATGCTTTTTCTCAAGAAGAACACGGAGCTGTTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAGAGCAATGGGAATGGTaGGCCAGATGGTCGAGTAGA +
Preference number: 2 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKEQWEW*ARWSSR
Trigger: TCTACTCGACCATCTGGCCCACCATTCCCATTGCTC...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAAATCCGAGTTGTTGGTaGCCTGCATGCCTTCATTCC +
Preference number: 2 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKNPSCW*PACLHS
Trigger: GGAATGAAGGCATGCAGGCCACCAACAACTCGGATT...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGTGTTTCCTGGTGTTTTaGCTGCTGACGCCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWCFLVF*LLTPVF
Trigger: GAAGACTGGCGTCAGCAGCCAAAACACCAGGAAACA...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTAGTGAAGTCTGCATGTaGCCCGTTGGACTTAACCTC +
Preference number: 2 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSSEVCM*PVGLNL
Trigger: GAGGTTAAGTCCAACGGGCCACATGCAGACTTCACT...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAAAAGGCCCAGCAGTCTaGATGTTGGGAAGGGAGTAT +
Preference number: 2 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKKGPAV*MLGREY
Trigger: ATACTCCCTTCCCAACATCCAGACTGCTGGGCCTTT...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp CTTTCTTTCTTCAGCCAGGTCACAAGAACTGCCTATGGGCTAATCTaGAGAGCATGTTTTTCTTGGTCTGAGGCCTGGGAGAAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: LSFFSQVTRTAYGLI*RACFSWSEAWEKEQ
Trigger: CTGCTCTTTCTCCCAGGCCTCAGACCAAGAAAAACATGCTCTCAAGATTAGCCCATAGGCAGTTCTTGTGACCTGGCTGAAGAAAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp CACATATCAGGCTATCTCTTAAGAATACAACAGACTCCAATCCCATaGGAAGTGAGTTCGCAGCCTGCTCTCTGGGCTCTCTCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: HISGYLLRIQQTPIP*EVSSQPALWALSLF
Trigger: AAAGAGGGAGAGAGCCCAGAGAGCAGGCTGCGAACTCACTTCCAATGGGATTGGAGTCTGTTGTATTCTTAAGAGATAGCCTGATATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGGCAACCTGCCTACAGTaGAGTCTGCATGTGGCCCGT +
Preference number: 2 (lower is better)
Translates to: FPNSESPKCALKQTWVLMATCLQ*SLHVAR
Trigger: ACGGGCCACATGCAGACTTCACTGTAGGCAGGTTGC...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGGTTCTACCACCACTCTaGCCTGTGGGGTGGCCCCAT +
Preference number: 2 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVVLPPL*PVGWPH
Trigger: ATGGGGCCACCCCACAGGTCAGAGTGGTGGTAGAAC...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGTCTAATGTAAGTGGATaGCAAAGGCCCAGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWSNVSG*QRPSSL
Trigger: CAGACTGCTGGGCCTTTGGCATCCACTTACATTAGA...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTTTCCACAGCTACCCTTaGTGGCACGTGTCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSFHSYP*WHVSVC
Trigger: GCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAA...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTTTCTCCTCTGTATCTTaGCCATCACCTTTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSFSSVS*PSPFWV
Trigger: CACCCAGAAAGGTGATGGCCAAGATACAGAGGAGAA...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTTTGTCTCTCCTCAGTTaGGAGAGCCGAGGTGTTCCT +
Preference number: 2 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSLSLLS*ESRGVP
Trigger: AGGAACACCTCGGCTCTCCCAACTGAGGAGAGACAA...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCCCTTCCTTCTCCTTCTaGGGACTTCTGTGGTCGTCT +
Preference number: 2 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFPSFSF*GLLWSS
Trigger: AGACGACCACAGAAGTCCTCAGAAGGAGAAGGAAGG...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp CTGAATCTCTTTCCTAAGATCAGTCAGGAAAATTCATGTCTTATTTCTTCCTGGATTCCCACACCCACGTaGGCTGTCTGGATCATCCCG +
Preference number: 2 (lower is better)
Translates to: LNLFPKISQENSCLISSWIPTPT*AVWIIP
Trigger: CGGGATGATCCAGACAGCCCACGTGGGTGTGGGAAT...CCAGGAAGAAATAAGACATGAATTTTCCTGACTGATCTTAGGAAAGAGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAACAGCAGTCTGGATGTTaGGAAGGGAGTATTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQQQSGC*EGSIQS
Trigger: GCTCTGAATACTCCCTTCCCAACATCCAGACTGCTG...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp TGCCTAATGCACATTCAATTCCAGTTTTCGTTTCTCCTCTGTATCTaGGCCATCACCTTTCTGGGTGTGCAAAGAAACCATACACCTTGG +
Preference number: 2 (lower is better)
Translates to: CLMHIQFQFSFLLCI*AITFLGVQRNHTPW
Trigger: CCAAGGTGTATGGTTTCTTTGCACACCCAGAAAGGTGATGGCCAAGATACAGAGGAGAAACGAAAACTGGAATTGAATGTGCATTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACCACTTTAAAGATTTCTaGGTGTTCTCAAGAGGTCAA +
Preference number: 2 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNHFKDF*VFSRGQ
Trigger: TTGACCTCTTGAGAACACTCAGAAATCTTTAAAGTG...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR TCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTTTTCGCATCTGTATCTaGGTCTGCAGTGGAACAAGG +
Preference number: 2 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSFRICI*VCSGTR
Trigger: CCTTGTTCCACTGCAGACTCAGATACAGATGCGAAA...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGCTATACTCTTGCATCTaGGTTTACTCATCCTCTGAC +
Preference number: 2 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQLYSCI*VYSSSD
Trigger: GTCAGAGGATGAGTAAACCCAGATGCAAGAGTATAG...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGCGTGTCAGTGTGCAGTaGAAACCCAGAACTAAGCCC +
Preference number: 2 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVRVSVQ*KPRTKP
Trigger: GGGCTTAGTTCTGGGTTTCCACTGCACACTGACACG...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp AACAGGGGATGCCATGTTTTGACTCGACCTGATAAACTCATTTCTTaGCCAAGTTATTATTTCAGGCTCTGCTTAGCCACCATTTCCCTG +
Preference number: 2 (lower is better)
Translates to: NRGCHVLTRPDKLIS*PSYYFRLCLATISL
Trigger: CAGGGAAATGGTGGCTAAGCAGAGCCTGAAATAATAACTTGGCAAAGAAATGAGTTTATCAGGTCGAGTCAAAACATGGCATCCCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp CTGAATCTCTTTCCTAAGATCAGTCAGGAAAATTCATGTCTTATTTCTTCCTGGAGTGGACCAAGGCGTTaGTGCAGTGACCCCAGAAAA +
Preference number: 2 (lower is better)
Translates to: LNLFPKISQENSCLISSWSGPRR*CSDPRK
Trigger: TTTTCTGGGGTCACTGCATCAACGCCTTGGTCCACT...CCAGGAAGAAATAAGACATGAATTTTCCTGACTGATCTTAGGAAAGAGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR GCA 90 bp CTCCATGAACCAACAGAAGCTTCTCTAAGTAGGAAAACTGTGCGATGGCGTAATACTATCTCAGACTTCTaGAGAGGAGACACTCTGTAT +
Preference number: 2 (lower is better)
Translates to: LHEPTEASLSRKTVRWRNTISDF*RGDTLY
Trigger: ATACAGAGTGTCTCCTCTGCAGAAGTCTGAGATAGT...ATTACGCCATCGCACAGTTTTCCTACTTAGAGAAGCTTCTGTTGGTTCATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR GCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTTGCGTCTGTCATCACTaGAAATATTGTTTAGTCTAC +
Preference number: 2 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSCVCHH*KYCLVY
Trigger: GTAGACTAAACAATATTTGCAGTGATGACAGACGCA...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGTTCCAGGGCATCAGTTaGTTTGCCCTGCTGGAAATG +
Preference number: 2 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVFQGIS*FALLEM
Trigger: CATTTCCAGCAGGGCAAACCAACTGATGCCCTGGAA...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTCCCCTGAGTTGGCCCTaGCTAAATATTATACATCAC +
Preference number: 2 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSPLSWP*LNIIHH
Trigger: GTGATGTATAATATTTAGCCAGGGCCAACTCAGGGG...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTATGGATCCCAGGAGATaGAGACTACATTTCAAATGC +
Preference number: 2 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSMDPRR*RLHFKC
Trigger: GCATTTGAAATGTAGTCTTCATCTCCTGGGATCCAT...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCTTCACCAGTAACAGTTaGCCACAAGTATTTAGGCCA +
Preference number: 2 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAFTSNS*PQVFRP
Trigger: TGGCCTAAATACTTGTGGGCAACTGTTACTGGTGAA...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGGAGTGTAACAGGGGATaGCATGTTTTGACTCGACCT +
Preference number: 2 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVECNRG*HVLTRP
Trigger: AGGTCGAGTCAAAACATGGCATCCCCTGTTACACTC...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp CTGAATCTCTTTCCTAAGATCAGTCAGGAAAATTCATGTCTTATTTCTTCCTGGTTTTGCAGGTGTGCTTaGCTGCTCTCCATGCCACAT +
Preference number: 2 (lower is better)
Translates to: LNLFPKISQENSCLISSWFCRCA*LLSMPH
Trigger: ATGTGGCATGGAGAGCAGCCAAGCACACCTGCAAAA...CCAGGAAGAAATAAGACATGAATTTTCCTGACTGATCTTAGGAAAGAGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTAGCTCTCATACACACTaGGCTGATCATGACAATTGT +
Preference number: 2 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSSSHTH*ADHDNC
Trigger: ACAATTGTCATGATCAGCCCAGTGTGTATGAGAGCT...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTTCCAAAAATCTGGTTTaGCAACCAGAGCAGAGAACA +
Preference number: 2 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSSKNLV*QPEQRT
Trigger: TGTTCTCTGCTCTGGTTGCCAAACCAGATTTTTGGA...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGGGCCATCCAAAAATCTaGTTTGGCAACCAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVGHPKI*FGNQSR
Trigger: TCTGCTCTGGTTGCCAAACCAGATTTTTGGATGGCC...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 90 bp CAGGAGATGAAGACTACATTTCAAATGCTGATGTTAAATCACTCCTaGAATTACTTTGAGACGATGACCCTGGGCAGTAACTCAAACCCT +
Preference number: 2 (lower is better)
Translates to: QEMKTTFQMLMLNHS*NYFETMTLGSNSNP
Trigger: AGGGTTTGAGTTACTGCCCAGGGTCATCGTCTCAAAGTAATTCAAGGAGTGATTTAACATCAGCATTTGAAATGTAGTCTTCATCTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR TCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCCTCACAGAGCACAGTTaGATGCTTCATAACGACATA +
Preference number: 2 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFLTEHS*MLHNDI
Trigger: TATGTCGTTATGAAGCATTCAACTGTGCTCTGTGAG...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGACACATCGAGCGTGCTaGTCTGTTAACACCTTTCAA +
Preference number: 2 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVTHRAC*SVNTFQ
Trigger: TTGAAAGGTGTTAACAGACCAGCACGCTCGATGTGT...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGCTGGGCAGGGTTATTTaGATAGTGCTATTACTCCAA +
Preference number: 2 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVLGRVI*IVLLLQ
Trigger: TTGGAGTAATAGCACTATCCAAATAACCCTGCCCAG...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGTGTGTTCCTTCGCTGTaGAGGCATGTTATAAATTCA +
Preference number: 2 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVCVPSL*RHVINS
Trigger: TGAATTTATAACATGCCTGCACAGCGAAGGAACACA...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGAATGTCCTATACTCTTaGATCTGGGTTTACTCATCC +
Preference number: 2 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVNVLYS*IWVYSS
Trigger: GGATGAGTAAACCCAGATGCAAGAGTATAGGACATT...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR GCA 90 bp CTGAATCTCTTTCCTAAGATCAGTCAGGAAAATTCATGTCTTATTTCTTCCTGGCATTGTACAGGCCGATaGACCAACGTTCAAATAAAA +
Preference number: 2 (lower is better)
Translates to: LNLFPKISQENSCLISSWHCTGR*TNVQIK
Trigger: TTTTATTTGAACGTTGGTGCATCGGCCTGTACAATG...CCAGGAAGAAATAAGACATGAATTTTCCTGACTGATCTTAGGAAAGAGATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR CAA 90 bp TACATGAAGAAAACATTTCTTGAGTGTAACAGGGGATGCCATGTTTaGACTCGACCTGATAAACTCATTTCTTTGCCAAGTTATTATTTC +
Preference number: 2 (lower is better)
Translates to: YMKKTFLECNRGCHV*TRPDKLISLPSYYF
Trigger: GAAATAATAACTTGGCAAAGAAATGAGTTTATCAGGTCGAGTCAAAACATGGCATCCCCTGTTACACTCAAGAAATGTTTTCTTCATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp AAGCATACCCATGCGGGACGCCCTGCTGCAGGGAGCTaGCCCGGAACAGCGTCGGGGGCGTCTTCCGGCCCA +
Preference number: 3 (lower is better)
Translates to: KHTHAGRPAAGS*PGTASGASSGP
Trigger: TGGGCCGGAAGACGCCCCCGACGCTGTTCCGGGGCAGCTCCCTGCAGCAGGGCGTCCCGCATGGGTATGCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR GCA 72 bp CATCGGCCGCCATGCACTGAGTGGTGTGGCCAGCCATaGAGCAGGTGTGGGGGTGAGGGGCGCCTGGACACG +
Preference number: 3 (lower is better)
Translates to: HRPPCTEWCGQP*SRCGGEGRLDT
Trigger: CGTGTCCAGGCGCCCCTCACCCCCACACCTGCTGCATGGCTGGCCACACCACTCAGTGCATGGCGGCCGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp GCCTGGACACGGCGGCAGGACTGGGCCGAGTGCACCTaGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGT +
Preference number: 3 (lower is better)
Translates to: AWTRRQDWAECT*RGCGRLFQGIS
Trigger: ACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCACTCGGCCCAGTCCTGCCGCCGTGTCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp GGAACAGCGTCGGGGGCGTCTTCCGGCCCAGCCTCTTaGTCAGGCGGTCGCGCTCGTTCAGCCTCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: GTASGASSGPAS*SGGRARSASFH
Trigger: ATGGAAAGAGGCTGAACGAGCGCGACCGCCTGATCAAGAGGCTGGGCCGGAAGACGCCCCCGACGCTGTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR TCA 72 bp GAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTaGACTTGGCCATCTCGGGCAACGGGGGAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: EGGSEGSGIAQA*TWPSRATGESG
Trigger: CCCACTCTCCCCCGTTGCCCGAGATGGCCAAGTTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp CGGCGGCAGGACTGGGCCGAGTGCACCTGGAGAGGGTaGGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCC +
Preference number: 3 (lower is better)
Translates to: RRQDWAECTWRG*GRLFQGISWFA
Trigger: GGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCACTCGGCCCAGTCCTGCCGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp TTTGGGTTGGCTGCCCATCGGCCGCCATGCACTGAGTaGTGTGGCCAGCCATGCAGCAGGTGTGGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: FGLAAHRPPCTE*CGQPCSRCGGE
Trigger: CTCACCCCCACACCTGCTGCATGGCTGGCCACACCACTCAGTGCATGGCGGCCGATGGGCAGCCAACCCAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp GTCTGCAGTGGAACAAGGAAAGGCGCGGGTTTGGGTTaGCTGCCCATCGGCCGCCATGCACTGAGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: VCSGTRKGAGLG*LPIGRHALSGV
Trigger: CACACCACTCAGTGCATGGCGGCCGATGGGCAGCCAACCCAAACCCGCGCCTTTCCTTGTTCCACTGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAAGTCATTATGGGGGTCTaGGGCCCTCACCTCCGAAAC +
Preference number: 3 (lower is better)
Translates to: CVALEREAQREAALHRPEVIMGV*GPHLRN
Trigger: GTTTCGGAGGTGAGGGCCCAAGACCCCCATAATGAC...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp AGGGAGTATTCAGAGCCTGACCACGGCTGGGAGTCCTaGAGGGGTTCTACCACCACTCTGACCTGTGGGGTG +
Preference number: 3 (lower is better)
Translates to: REYSEPDHGWES*RGSTTTLTCGV
Trigger: CACCCCACAGGTCAGAGTGGTGGTAGAACCCCTTCAGGACTCCCAGCCGTGGTCAGGCTCTGAATACTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp CCGAGTTGTTGGTGGCCTGCATGCCTTCATTCCCACTaGTTCCCACACCCACGTGGGCTGTCTGGATCATCC +
Preference number: 3 (lower is better)
Translates to: PSCWWPACLHSH*FPHPRGLSGSS
Trigger: GGATGATCCAGACAGCCCACGTGGGTGTGGGAATCAGTGGGAATGAAGGCATGCAGGCCACCAACAACTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CAA 90 bp CTGACTAACAGCTCCGTGTTCTTCTTGAGAAAAAGCATACCCATGCGGGACGCCATCATCCCGACATCGTaGGCGCCGTCTCCGATGGCG +
Preference number: 3 (lower is better)
Translates to: LTNSSVFFLRKSIPMRDAIIPTS*APSPMA
Trigger: CGCCATCGGAGACGGCGCCAACGATGTCGGGATGAT...GGCGTCCCGCATGGGTATGCTTTTTCTCAAGAAGAACACGGAGCTGTTAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CAA 90 bp CTTGAGAAAAAGCATACCCATGCGGGACGCCCTGCTGCAGGGAGCTGCCCCGGACAGAAAACCTTTGTGTaGAAGCCTTCGCCATTCTGG +
Preference number: 3 (lower is better)
Translates to: LEKKHTHAGRPAAGSCPGQKTFV*KPSPFW
Trigger: CCAGAATGGCGAAGGCTTCAACACAAAGGTTTTCTG...TCCGGGGCAGCTCCCTGCAGCAGGGCGTCCCGCATGGGTATGCTTTTTCTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR TCA 72 bp AGCAGTCTGGATGTTGGGAAGGGAGTATTCAGAGCCTaGCCACGGCTGGGAGTCCTGAAGGGGTTCTACCAC +
Preference number: 3 (lower is better)
Translates to: SSLDVGKGVFRA*PRLGVLKGFYH
Trigger: GTGGTAGAACCCCTTCAGGACTCCCAGCCGTGGTCAGGCTCTGAATACTCCCTTCCCAACATCCAGACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp TGTAAGTGGATGCCAAAGGCCCAGCAGTCTGGATGTTaGGAAGGGAGTATTCAGAGCCTGACCACGGCTGGG +
Preference number: 3 (lower is better)
Translates to: CKWMPKAQQSGC*EGSIQSLTTAG
Trigger: CCCAGCCGTGGTCAGGCTCTGAATACTCCCTTCCCAACATCCAGACTGCTGGGCCTTTGGCATCCACTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGTCTGCATGTGGCCCGTaGGACTTAACCTCTGAGTTA +
Preference number: 3 (lower is better)
Translates to: FAELTASVCNLVQSTLPQSACGP*DLTSEL
Trigger: TAACTCAGAGGTTAAGTCCAACGGGCCACATGCAGA...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGAGGCGCGGGTTTGGGTaGGCTGCCCATCGGCCGCCA +
Preference number: 3 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWRRGFG*AAHRPP
Trigger: TGGCGGCCGATGGGCAGCCAACCCAAACCCGCGCCT...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTAGGAAAGGCGCGGGTTaGGGTTGGCTGCCCATCGGC +
Preference number: 3 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSRKGAG*GWLPIG
Trigger: GCCGATGGGCAGCCAACCCAAACCCGCGCCTTTCCT...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp TCTGGCGGAGTGACAAGCCCCATGTGGCATTTTTGCTaGGCTGACAGCCAGCGTATGCAACCTAGTCCAGTC +
Preference number: 3 (lower is better)
Translates to: SGGVTSPMWHFC*ADSQRMQPSPV
Trigger: GACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAAAATGCCACATGGGGCTTGTCACTCCGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp CACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTaGCAGTTTAGCTCAATCCAGAGTCAGGCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: HSSRPRVGLSGF*QFSSIQSQALE
Trigger: CTCCAGGGCCTGACTCTGGATTGAGCTAAACTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp GGGAGAAAGAAATGGCCCTTTTTGGAGCCTCACCTGTaGATTGCATTGTTCTGCTGCCCCTCAGGCCCTCTC +
Preference number: 3 (lower is better)
Translates to: GRKKWPFLEPHL*IALFCCPSGPL
Trigger: GAGAGGGCCTGAGGGGCAGCAGAACAATGCAATTCACAGGTGAGGCTCCAAAAAGGGCCATTTCTTTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp CCAATCCCATTGGAAGTGAGTTCGCAGCCTGCTCTCTaGGCTCTCTCCCTCTTTCCGGCCTTTTCTCTTTCA +
Preference number: 3 (lower is better)
Translates to: PIPLEVSSQPAL*ALSLFPAFSLS
Trigger: TGAAAGAGAAAAGGCCGGAAAGAGGGAGAGAGCCCAGAGAGCAGGCTGCGAACTCACTTCCAATGGGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp AAGAGGATGAGGGAGTGGACCAAGGCGTTGATGCAGTaGCCCCAGAAAACCTTTGTGTTGAAGCCTTCGCCA +
Preference number: 3 (lower is better)
Translates to: KRMREWTKALMQ*PQKTFVLKPSP
Trigger: TGGCGAAGGCTTCAACACAAAGGTTTTCTGGGGTCACTGCATCAACGCCTTGGTCCACTCCCTCATCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR TCA 72 bp GGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTaGGTGGATTCTGCCAGTTTAGCTCAATCCAGAGTC +
Preference number: 3 (lower is better)
Translates to: GCLYTAVDQGLA*VDSASLAQSRV
Trigger: GACTCTGGATTGAGCTAAACTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp GTTTTCCACAGCTACCCTTGCTGGCACGTGTCAGTGTaGAGTGGAAACCCAGAACTAAGCCCACAGTACAAC +
Preference number: 3 (lower is better)
Translates to: VFHSYPCWHVSV*SGNPELSPQYN
Trigger: GTTGTACTGTGGGCTTAGTTCTGGGTTTCCACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp TCTGCTCTCCTGATACGTGTTTTCCACAGCTACCCTTaGTGGCACGTGTCAGTGTGCAGTGGAAACCCAGAA +
Preference number: 3 (lower is better)
Translates to: SALLIRVFHSYP*WHVSVCSGNPE
Trigger: TTCTGGGTTTCCACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp GCTCTCCTGATACGTGTTTTCCACAGCTACCCTTGCTaGCACGTGTCAGTGTGCAGTGGAAACCCAGAACTA +
Preference number: 3 (lower is better)
Translates to: ALLIRVFHSYPC*HVSVCSGNPEL
Trigger: TAGTTCTGGGTTTCCACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACGGAGACACTCTGTATTaGCTGGGGACTCTGATGGGG +
Preference number: 3 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNGDTLY*LGTLMG
Trigger: CCCCATCAGAGTCCCCAGCAAATACAGAGTGTCTCC...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR-3UTR CAA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGAGGGCTCCAGGCAGGTaGTTTAGTAAGGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWRAPGR*FSKGSR
Trigger: CCTGGAGCCCTTACTAAACAACCTGCCTGGAGCCCT...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCAATGTTCTATGCACCTaGGGGAGAAAGAAATGGCCC +
Preference number: 3 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSNVLCT*GRKKWP
Trigger: GGGCCATTTCTTTCTCCCCAAGGTGCATAGAACATT...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp AGTGAAGTCTGCATGTGGCCCGTTGGACTTAACCTCTaGGTTAACTCAACAGGAAGCAAGTGTGCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: SEVCMWPVGLNL*VNSTGSKCALL
Trigger: GAGCAGGGCACACTTGCTTCCTGTTGAGTTAACTCAGAGGTTAAGTCCAACGGGCCACATGCAGACTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp AGGGCGGTGGAAGAAGGAATTTTTCGCATCTGTATCTaGGTCTGCAGTGGAACAAGGAAAGGCGCGGGTTTG +
Preference number: 3 (lower is better)
Translates to: RAVEEGIFRICI*VCSGTRKGAGL
Trigger: CAAACCCGCGCCTTTCCTTGTTCCACTGCAGACTCAGATACAGATGCGAAAAATTCCTTCTTCCACCGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp CAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTaGTACGTGTTTTCCACAGCTACCCTTGCTGGCACG +
Preference number: 3 (lower is better)
Translates to: QHRVFIQTTLLS*YVFSTATLAGT
Trigger: CGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp ACCTCTGAGTTAACTCAACAGGAAGCAAGTGTGCCCTaGTCCAATTACACAGGATGGGCCTCTCACGCAACA +
Preference number: 3 (lower is better)
Translates to: TSELTQQEASVP*SNYTGWASHAT
Trigger: TGTTGCGTGAGAGGCCCATCCTGTGTAATTGGAGCAGGGCACACTTGCTTCCTGTTGAGTTAACTCAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp AAAGAAATGGCCCTTTTTGGAGCCTCACCTGTGAATTaGATTGTTCTGCTGCCCCTCAGGCCCTCTCTGCAT +
Preference number: 3 (lower is better)
Translates to: KEMALFGASPVN*IVLLPLRPSLH
Trigger: ATGCAGAGAGGGCCTGAGGGGCAGCAGAACAATGCAATTCACAGGTGAGGCTCCAAAAAGGGCCATTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp CACAGATGTGACAGCAGACAGGAGAGCACGTGGCTTTaGTCGCATGAGAAAGACGCCACAAAGATGATGCAT +
Preference number: 3 (lower is better)
Translates to: HRCDSRQESTWL*SHEKDATKMMH
Trigger: ATGCATCATCTTTGTGGCGTCTTTCTCATGCGAGCAAAGCCACGTGCTCTCCTGTCTGCTGTCACATCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp AGAAGGAATTTTTCGCATCTGTATCTGAGTCTGCAGTaGAACAAGGAAAGGCGCGGGTTTGGGTTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: RRNFSHLYLSLQ*NKERRGFGLAA
Trigger: GGCAGCCAACCCAAACCCGCGCCTTTCCTTGTTCCACTGCAGACTCAGATACAGATGCGAAAAATTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp TGCCCACAAGTATTTAGGCCATCCAAAAATCTGGTTTaGCAACCAGAGCAGAGAACAGGGCTCCAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: CPQVFRPSKNLV*QPEQRTGLQAG
Trigger: ACCTGCCTGGAGCCCTGTTCTCTGCTCTGGTTGCCAAACCAGATTTTTGGATGGCCTAAATACTTGTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGCTTCCAGGGCATCAGTaGGTTTGCCCTGCTGGAAAT +
Preference number: 3 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWLPGHQ*VCPAGN
Trigger: ATTTCCAGCAGGGCAAACCAACTGATGCCCTGGAAG...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGCCAGCAGTCTGGATGTaGGGAAGGGAGTATTCAGAG +
Preference number: 3 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWPAVWM*GREYSE
Trigger: CTCTGAATACTCCCTTCCCAACATCCAGACTGCTGG...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp AAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGTaGCGATTCCTCTGTGTCCTCCTCTCAGTGTCTCCG +
Preference number: 3 (lower is better)
Translates to: KAYFRVSTAKIW*RFLCVLLSVSP
Trigger: CGGAGACACTGAGAGGAGGACACAGAGGAATCGCCACCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp ACAGTTGCCCACAAGTATTTAGGCCATCCAAAAATCTaGTTTGGCAACCAGAGCAGAGAACAGGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: TVAHKYLGHPKI*FGNQSREQGSR
Trigger: CCTGGAGCCCTGTTCTCTGCTCTGGTTGCCAAACCAGATTTTTGGATGGCCTAAATACTTGTGGGCAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp CATAACCCTGGTCAAGAAGCCTGGAATATTCTGCACTaGGGCAGGACAGACACATCAGCTCCACTCCTAAAT +
Preference number: 3 (lower is better)
Translates to: HNPGQEAWNILH*GRTDTSAPLLN
Trigger: ATTTAGGAGTGGAGCTGATGTGTCTGTCCTGCCTCAGTGCAGAATATTCCAGGCTTCTTGACCAGGGTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp AGAACTAAGCCCACAGTACAACTGGTCTCTTCCTTTTaGAGGGTCATCCAGGAGAAGAGAGACTCAACACAG +
Preference number: 3 (lower is better)
Translates to: RTKPTVQLVSSF*RVIQEKRDSTQ
Trigger: CTGTGTTGAGTCTCTCTTCTCCTGGATGACCCTGCAAAAGGAAGAGACCAGTTGTACTGTGGGCTTAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp GTTAACACCTTTCAAGAATGCCTAATGATGTCATTATaGGGGTCTTGGGCCCTCACCTCCGAAACCCCTCAA +
Preference number: 3 (lower is better)
Translates to: VNTFQECLMMSL*GSWALTSETPQ
Trigger: TTGAGGGGTTTCGGAGGTGAGGGCCCAAGACCCCCATAATGACATCATTAGGCATTCTTGAAAGGTGTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp GGTGTAAAAAGAATCCCTCTTTTGTCTCTCCTCAGTTaGGAGAGCCGAGGTGTTCCTCAGAGGTTAACACTG +
Preference number: 3 (lower is better)
Translates to: GVKRIPLLSLLS*ESRGVPQRLTL
Trigger: CAGTGTTAACCTCTGAGGAACACCTCGGCTCTCCCAACTGAGGAGAGACAAAAGAGGGATTCTTTTTACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTGACAGTCCTTCCGTCTaGCTGGGTACTCTGATATTT +
Preference number: 3 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSDSPSV*LGTLIF
Trigger: AAATATCAGAGTACCCAGCAAGACGGAAGGACTGTC...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp TTTCCTGGTGTTTTGGCTGCTGACGCCAGTCTTCTCTaGCAAAGATGTGTTAACACTGGGTGCAACAAACTG +
Preference number: 3 (lower is better)
Translates to: FPGVLAADASLL*QRCVNTGCNKL
Trigger: CAGTTTGTTGCACCCAGTGTTAACACATCTTTGTCAGAGAAGACTGGCGTCAGCAGCCAAAACACCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281620.10
ENST00000381655.7
3UTR GCA 72 bp GTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTaGTCTCCTGATACGTGTTTTCCACAGCTACCCTTG +
Preference number: 3 (lower is better)
Translates to: VLISTEYSSRLL*SPDTCFPQLPL
Trigger: CAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp TCCCATTTGTTTGTGGCTTCTGCCCATTCAGATTTATaGTGGCTCAATGCCCTTTTCTCCTCACTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: SHLFVASAHSDL*WLNALFSSLRV
Trigger: AACCCTGAGTGAGGAGAAAAGGGCATTGAGCCAGCATAAATCTGAATGGGCAGAAGCCACAAACAAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp ACTGCCTATGGGCTAATCTTGAGAGCATGTTTTTCTTaGTCTGAGGCCTGGGAGAAAGAGCAGAGTGGATAT +
Preference number: 3 (lower is better)
Translates to: TAYGLILRACFS*SEAWEKEQSGY
Trigger: ATATCCACTCTGCTCTTTCTCCCAGGCCTCAGACCAAGAAAAACATGCTCTCAAGATTAGCCCATAGGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp ATATCTCAAAGGCAACTAGAGCCCGAGATTGTCACTTaGAAATGCGCCAGCCTGGGTGTAAAAAGAATCCCT +
Preference number: 3 (lower is better)
Translates to: ISQRQLEPEIVT*KCASLGVKRIP
Trigger: AGGGATTCTTTTTACACCCAGGCTGGCGCATTTTCAAGTGACAATCTCGGGCTCTAGTTGCCTTTGAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp TTCCAGGGCATCAGTTGGTTTGCCCTGCTGGAAATGTaGCTAAGAGGTTCAAATAAATGTTCTCAGGTTGAC +
Preference number: 3 (lower is better)
Translates to: FQGISWFALLEM*LRGSNKCSQVD
Trigger: GTCAACCTGAGAACATTTATTTGAACCTCTTAGCCACATTTCCAGCAGGGCAAACCAACTGATGCCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp GCTCTCATACACACTGGGCTGATCATGACAATTGTCTaGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAA +
Preference number: 3 (lower is better)
Translates to: ALIHTGLIMTIV*VSRPISEFLLQ
Trigger: TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAGCCCAGTGTGTATGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGGTGTTTCCTGGTGTTTaGGCTGCTGACGCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVVFPGV*AADASL
Trigger: AAGACTGGCGTCAGCAGCCAAAACACCAGGAAACAC...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGAGCCAATTTAGTCATTaGGCTGTAAGAATGCTCAAC +
Preference number: 3 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQSQFSH*AVRMLN
Trigger: GTTGAGCATTCTTACAGCCAAATGACTAAATTGGCT...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp TTAGTCATAGGCACATTTTGTGTTAGAGTTCCTGCATaGCAGTCCTTCCGTCTTGCTGGGTACTCTGATATT +
Preference number: 3 (lower is better)
Translates to: LVIGTFCVRVPA*QSFRLAGYSDI
Trigger: AATATCAGAGTACCCAGCAAGACGGAAGGACTGTCATGCAGGAACTCTAACACAAAATGTGCCTATGACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR GCA 72 bp ACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTaGCCACAAGTATTTAGGCCATCCAAAAATCTGGTT +
Preference number: 3 (lower is better)
Translates to: TCSPLPFFTSNS*PQVFRPSKNLV
Trigger: AACCAGATTTTTGGATGGCCTAAATACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAACAATGTCCTATACTCTaGCATCTGGGTTTACTCATC +
Preference number: 3 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQQCPIL*HLGLLI
Trigger: GATGAGTAAACCCAGATGCAAGAGTATAGGACATTG...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp AACAGGTTTGCGCAGACATACACCAGTCAACAGGATTaGTCAAAGCCACAAATCACTAAATTCTCCCAAAAC +
Preference number: 3 (lower is better)
Translates to: NRFAQTYTSQQD*SKPQITKFSQN
Trigger: GTTTTGGGAGAATTTAGTGATTTGTGGCTTTGATCAATCCTGTTGACTGGTGTATGTCTGCGCAAACCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CCA 72 bp ACATTCAATTCCAGTTTTCGTTTCTCCTCTGTATCTTaGCCATCACCTTTCTGGGTGTGCAAAGAAACCATA +
Preference number: 3 (lower is better)
Translates to: TFNSSFRFSSVS*PSPFWVCKETI
Trigger: TATGGTTTCTTTGCACACCCAGAAAGGTGATGGCCAAGATACAGAGGAGAAACGAAAACTGGAATTGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR-3UTR CAA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGATCCAAAAATCTGGTTaGGCAACCAGAGCAGAGAAC +
Preference number: 3 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVIQKSG*ATRAEN
Trigger: GTTCTCTGCTCTGGTTGCCAAACCAGATTTTTGGAT...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR TCA 72 bp TCTGACAAAGATGTGTTAACACTGGGTGCAACAAACTaGATCTCTTTCCTAAGATCAGTCAGGAAAATTCAT +
Preference number: 3 (lower is better)
Translates to: SDKDVLTLGATN*ISFLRSVRKIH
Trigger: ATGAATTTTCCTGACTGATCTTAGGAAAGAGATTCAGTTTGTTGCACCCAGTGTTAACACATCTTTGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281620.10
ENST00000381655.7
3UTR CAA 72 bp CGGAACAGCGTCGGGGGCGTCTTCCGGCCCAGCCTCTaGATCAGGCGGTCGCGCTCGTTCAGCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RNSVGGVFRPSL*IRRSRSFSLFP
Trigger: TGGAAAGAGGCTGAACGAGCGCGACCGCCTGATCAAGAGGCTGGGCCGGAAGACGCCCCCGACGCTGTTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281620.10
3UTR CAA 72 bp AGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAACTaGGCCATCTCGGGCAACGGGGGAGAGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RLRGKRHCTGLN*AISGNGGEWGG
Trigger: CCCGCCCCACTCTCCCCCGTTGCCCGAGATGGCCAAGTTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGTGCGGGACGCCCTGCTaGAGGGAGCTGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALCGTPC*RELPRN
Trigger: GTTCCGGGGCAGCTCCCTGCAGCAGGGCGTCCCGCA...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGGGATTATACACGGGGTaGGGCGCGGGGGAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLGLYTG*GAGELA
Trigger: GGCGAGCTCCCCCGCGCCGCACCCCGTGTATAATCC...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAAATTCCCACACCCACGTaGGCTGTCTGGATCATCCCG +
Preference number: 4 (lower is better)
Translates to: CVALEREAQREAALHRPEIPTPT*AVWIIP
Trigger: CGGGATGATCCAGACAGCCCACGTGGGTGTGGGAAT...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp AGTCTGCAGTGGAACAAGGAAAGGCGCGGGTTTGGGTaGGCTGCCCATCGGCCGCCATGCACTGAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SLQWNKERRGFG*AAHRPPCTEWC
Trigger: ACACCACTCAGTGCATGGCGGCCGATGGGCAGCCAACCCAAACCCGCGCCTTTCCTTGTTCCACTGCAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGCACGGCTGGGAGTCCTaGAGGGGTTCTACCACCACT +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQHGWES*RGSTTT
Trigger: AGTGGTGGTAGAACCCCTTCAGGACTCCCAGCCGTG...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGTGCCTGCGTGGCCCTTaGGAGGGAGGCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLCLRGP*EGGSEG
Trigger: TCCCTCTGAGCCTCCCTCTCAAGGGCCACGCAGGCA...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGTGCACCTGGAGAGGGTaGGGAAGACTCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALCTWRG*GRLFQG
Trigger: GCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGCAGGACTGGGCCGAGTaGACCTGGAGAGGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLQDWAE*TWRGCG
Trigger: TCCGCACCCTCTCCAGGTGCACTCGGCCCAGTCCTG...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTAGGCTGCGCCGTCCGTaGCGCAGCGGCCAATGCGGC +
Preference number: 4 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLRLRRP*RSGQCG
Trigger: GCCGCATTGGCCGCTGCGGCACGGACGGCGCAGCCT...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGGCAGGTGTGCTTGGCTaGTCTCCATGCCACATCTTC +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQAGVLG*SPCHIF
Trigger: GAAGATGTGGCATGGAGAGCAGCCAAGCACACCTGC...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGTTCCACAGCTACCCTTaGTGGCACGTGTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQFHSYP*WHVSVC
Trigger: GCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAA...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAACGTAATCCGAGTTGTTaGTGGCCTGCATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: CVALEREAQREAALHRPERNPSC*WPACLH
Trigger: ATGAAGGCATGCAGGCCACCAACAACTCGGATTACG...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTGCCAGCTGAGGTTCACTGGATaGCAGCAGGACCACATCTGC +
Preference number: 4 (lower is better)
Translates to: GLSVHSSRPRVGLSGFCQLRFTG*QQDHIC
Trigger: GCAGATGTGGTCCTGCTGTCATCCAGTGAACCTCAG...CTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGCCGACAGAAGTCATCTaGAGACGGCTCTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALPTEVI*RRLSCQ
Trigger: TTGGCAAGAGAGCCGTCTTCAGATGACTTCTGTCGG...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGGAGTTGTTGGTGGCCTaGATGCCTTCATTCCCACTG +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQELLVA*MPSFPL
Trigger: CAGTGGGAATGAAGGCATGCAGGCCACCAACAACTC...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGGCCTACAGTGAAGTCTaGATGTGGCCCGTTGGACTT +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALAYSEV*MWPVGL
Trigger: AAGTCCAACGGGCCACATGCAGACTTCACTGTAGGC...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGTGCAGCTGGCCCTGCTaGAGCTGCCTGCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWCSWPC*SCLRGP
Trigger: AGGGCCACGCAGGCAGCTGCAGCAGGGCCAGCTGCA...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGGACTCAACACAGGACTaGGCTGTCTGTACACAGCAG +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQDSTQD*AVCTQQ
Trigger: CTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGTC...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACCTCCGATGGCGAGGGTaGTGGCCTTCACCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNLRWRG*WPSPAS
Trigger: AGAAGCGGGTGAAGGCCATCACCCTCGCCATCGGAG...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTCAGCAGGTGTGGGGGTaGGGGGCGCCTGGACACGGC +
Preference number: 4 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSQQVWG*GAPGHG
Trigger: GCCGTGTCCAGGCGCCCCTCACCCCCACACCTGCTG...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGCCTGCTGCAGGGAGCTaGCCCGGAACAGCGTCGGGG +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWPAAGS*PGTASG
Trigger: CCCCGACGCTGTTCCGGGGCAGCTCCCTGCAGCAGG...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGGGCCTGAGTGGATTCTaGCAGTTTAGCTCAATCCAG +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQGLSGF*QFSSIQ
Trigger: CTGGATTGAGCTAAACTGGCAGAATCCACTCAGGCC...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGCTGGTCTCTTCCTTTTaGAGGGTCATCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALLVSSF*RVIQEK
Trigger: CTTCTCCTGGATGACCCTGCAAAAGGAAGAGACCAG...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCGGGGTGAGGGGCGCCTaGACACGGCGGCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAGVRGA*TRRQDW
Trigger: CCAGTCCTGCCGCCGTGTCCAGGCGCCCCTCACCCC...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTCTGCAGCTGCCTGCGTaGCCCTTGAGAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSLQLPA*PLRGRL
Trigger: GAGCCTCCCTCTCAAGGGCCACGCAGGCAGCTGCAG...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp CTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTaGGTTTGCCCTGCTGGAAATGTGGCTAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LERVRKTLPGHQ*VCPAGNVAKRF
Trigger: GAACCTCTTAGCCACATTTCCAGCAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGTTTCGCATCTGTATCTaGGTCTGCAGTGGAACAAGG +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQFRICI*VCSGTR
Trigger: CCTTGTTCCACTGCAGACTCAGATACAGATGCGAAA...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTAATGGTGCGGGCGGGTaGCTCCAGCTGGTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSNGAGG*LQLVSN
Trigger: GTTGGAGACCAGCTGGAGGCACCCGCCCGCACCATT...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGGCCTCACCTGTGAATTaGATTGTTCTGCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLASPVN*IVLLPL
Trigger: GAGGGGCAGCAGAACAATGCAATTCACAGGTGAGGC...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAATCACCTTTCTGGGTGTaGAAAGAAACCATACACCTT +
Preference number: 4 (lower is better)
Translates to: CVALEREAQREAALHRPESPFWV*KETIHL
Trigger: AAGGTGTATGGTTTCTTTGCACACCCAGAAAGGTGA...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTGCCAGAGTACAAGATGCACTTaGTCACCCGGTTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLSVHSSRPRVGLSGFCQSTRCT*SPGCSS
Trigger: GGAGCTACAACCGGGTGACCAAGTGCATCTTGTACT...CTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAATCCTGGATTTCTTTTTaGTGGTGTCATAAGCACGGA +
Preference number: 4 (lower is better)
Translates to: CVALEREAQREAALHRPESWISF*WCHKHG
Trigger: TCCGTGCTTATGACACCACCAAAAAGAAATCCAGGA...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp TTGGCAACCAGAGCAGAGAACAGGGCTCCAGGCAGGTaGTTTAGTAAGGGCTCCAGGTGCTCACATTCATGC +
Preference number: 4 (lower is better)
Translates to: LATRAENRAPGR*FSKGSRCSHSC
Trigger: GCATGAATGTGAGCACCTGGAGCCCTTACTAAACAACCTGCCTGGAGCCCTGTTCTCTGCTCTGGTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp CTCTGCTCTCCTGATACGTGTTTTCCACAGCTACCCTaGCTGGCACGTGTCAGTGTGCAGTGGAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LCSPDTCFPQLP*LARVSVQWKPR
Trigger: TCTGGGTTTCCACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAAACACGTATCAGGAGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGGCTCACATTCATGCCTaGAGACATCTAGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQAHIHA*RHLGSV
Trigger: AACAGAACCTAGATGTCTTCAGGCATGAATGTGAGC...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACAGCCCGTGAGTCAGTaGGTGTCTGGCGGAGTGACA +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKQPVSQ*VSGGVT
Trigger: TGTCACTCCGCCAGACACTCACTGACTCACGGGCTG...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTGCCAGATAGTGAGACGAACCTaGAGCCTTGTCAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GLSVHSSRPRVGLSGFCQIVRRT*SLVKGK
Trigger: CTTTCCCTTGACAAGGCTTCAGGTTCGTCTCACTAT...CTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGGCTTCCCCTGTGGTCTaGACTCCAGGTTTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWASPVV*TPGLRG
Trigger: CCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGC...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGACAACACATCGAGCGTaGTGGTCTGTTAACACCTTT +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALTTHRA*WSVNTF
Trigger: AAAGGTGTTAACAGACCAGCACGCTCGATGTGTTGT...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGAGCCACCTGACACTTTaGGCCCGACTTTTAAAACAA +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALSHLTL*ARLLKQ
Trigger: TTGTTTTAAAAGTCGGGCGCAAAGTGTCAGGTGGCT...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTCCGCAAGCCTTCCGTaGCAAAGTATTCCAGATGGC +
Preference number: 4 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSSASLP*QSIPDG
Trigger: GCCATCTGGAATACTTTGCCACGGAAGGCTTGCGGA...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGTTTTGCAGGTGTGCTTaGCTGCTCTCCATGCCACAT +
Preference number: 4 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLFCRCA*LLSMPH
Trigger: ATGTGGCATGGAGAGCAGCCAAGCACACCTGCAAAA...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTAGGAAAGGCGCGGGTTTaGGTTGGCTGCCCATCGGCC +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVGKARV*VGCPSA
Trigger: GGCCGATGGGCAGCCAACCCAAACCCGCGCCTTTCC...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGACACATCGAGCGTGCTaGTCTGTTAACACCTTTCAA +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALTHRAC*SVNTFQ
Trigger: TTGAAAGGTGTTAACAGACCAGCACGCTCGATGTGT...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp GAAAGAAATGGCCCTTTTTGGAGCCTCACCTGTGAATaGCATTGTTCTGCTGCCCCTCAGGCCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ERNGPFWSLTCE*HCSAAPQALSA
Trigger: TGCAGAGAGGGCCTGAGGGGCAGCAGAACAATGCAATTCACAGGTGAGGCTCCAAAAAGGGCCATTTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCTCCGGCCCAGCCTCTTaGTCAGGCGGTCGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFSGPAS*SGGRAR
Trigger: ACGAGCGCGACCGCCTGATCAAGAGGCTGGGCCGGA...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGAGACTGGGCATTAAATaGAGATCAGGTAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQRLGIK*RSGKVK
Trigger: CTTCACCTTACCTGATCTTCATTTAATGCCCAGTCT...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGACCAGTCAACAGGATTaGTCAAAGCCACAAATCACT +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALTSQQD*SKPQIT
Trigger: AGTGATTTGTGGCTTTGATCAATCCTGTTGACTGGT...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTATGGTGTGGCCAGCCATaGAGCAGGTGTGGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVWCGQP*SRCGGE
Trigger: CTCACCCCCACACCTGCTGCATGGCTGGCCACACCA...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAGCCCATCGGCCGCCATaGACTGAGTGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQAHRPP*TEWCGQ
Trigger: CTGGCCACACCACTCAGTGCATGGCGGCCGATGGGC...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCCGGGTTTGGGTTGGCTaGCCATCGGCCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTARVWVG*PSAAMH
Trigger: GTGCATGGCGGCCGATGGGCAGCCAACCCAAACCCG...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGTCAGGAACAACCGTGTaGCACACGGCCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWSGTTV*HTARRV
Trigger: CACCCTTCTGGCCGTGTGCCACACGGTTGTTCCTGA...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCGGCGCGGGTTTGGGTTaGCTGCCCATCGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFGAGLG*LPIGRH
Trigger: ATGGCGGCCGATGGGCAGCCAACCCAAACCCGCGCC...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACCACAGCTACCCTTGCTaGCACGTGTCAGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNHSYPC*HVSVCS
Trigger: ACTGCACACTGACACGTGCCAGCAAGGGTAGCTGTG...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGCTGGGCAGGGTTATTTaGATAGTGCTATTACTCCAA +
Preference number: 4 (lower is better)
Translates to: FAELTASVCNLVQSTLPQLGRVI*IVLLLQ
Trigger: TTGGAGTAATAGCACTATCCAAATAACCCTGCCCAG...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTAGGTCAGTGCAGTGCTaGGTAATGGCTGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLRSVQC*VMAALV
Trigger: CACAAGGGCAGCCATTACTCAGCACTGCACTGACCT...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAGGGTGTGGCCATCGATaGTCAGGGCCACGTCATTTT +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKGCGHR*SGPRHF
Trigger: AAAATGACGTGGCCCTGATCATCGATGGCCACACCC...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGCCCGAGATTGTCACTTaGAAATGCGCCAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWPEIVT*KCASLG
Trigger: ACCCAGGCTGGCGCATTTTCAAGTGACAATCTCGGG...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGGGACATCTCATCCTCTaGCTTCTTATAGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLGHLIL*LLIAQR
Trigger: TCTTTGGGCTATAAGAAGGCAGAGGATGAGATGTCC...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGGTTAACTGCATTGTCTaGCTTGTGTCGCTTAAAATC +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALVNCIV*LVSLKI
Trigger: GATTTTAAGCGACACAAGGCAGACAATGCAGTTAAC...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGCATTGTACAGGCCGATaGACCAACGTTCAAATAAAA +
Preference number: 4 (lower is better)
Translates to: CTWRGCGRLFQGISWFALHCTGR*TNVQIK
Trigger: TTTTATTTGAACGTTGGTGCATCGGCCTGTACAATG...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACGTCTTTTTGCAGGTGTaGTTGGCTGCTCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNVFLQV*LAALHA
Trigger: GGCATGGAGAGCAGCCAAGCACACCTGCAAAAAGAC...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTAAGCTTTGTCCAGGCCTaGGCCGTTCAGCATCTCGCC +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVSFVQA*AVQHLA
Trigger: GGCGAGATGCTGAACGGCGCAGGCCTGGACAAAGCT...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAACCTATAGCAGTGTTTTaGAAACATTCAATTCAGCTA +
Preference number: 4 (lower is better)
Translates to: CVALEREAQREAALHRPEPIAVF*KHSIQL
Trigger: TAGCTGAATTGAATGTTTGCAAAACACTGCTATAGG...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAATGGGCCGAGTGCACCTaGAGAGGGTGCGGAAGACTC +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQWAECT*RGCGRL
Trigger: GAGTCTTCCGCACCCTCTCCAGGTGCACTCGGCCCA...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTACACCACTCTGACCTGTaGGGTGGCCCCATGTCAGAC +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVHHSDL*GGPMSD
Trigger: GTCTGACATGGGGCCACCCCACAGGTCAGAGTGGTG...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGTGGCCATCACCTTTCTaGGTGTGCAAAGAAACCATA +
Preference number: 4 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLWPSPF*VCKETI
Trigger: TATGGTTTCTTTGCACACCCAGAAAGGTGATGGCCA...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp GATGACTTCTTCCTGACTAACAGCTCCGTGTTCTTCTaGAGAAAAAGCATACCCATGCGGGACGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DDFFLTNSSVFF*RKSIPMRDALL
Trigger: CAGCAGGGCGTCCCGCATGGGTATGCTTTTTCTCAAGAAGAACACGGAGCTGTTAGTCAGGAAGAAGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281620.10
CDS-3UTR TCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAAGTGGACCAAGGCGTTaGTGCAGTGACCCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKSGPRR*CSDPRK
Trigger: TTTTCTGGGGTCACTGCATCAACGCCTTGGTCCACT...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTGGAGTATTCAGAGCCTaGCCACGGCTGGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSGVFRA*PRLGVL
Trigger: CAGGACTCCCAGCCGTGGTCAGGCTCTGAATACTCC...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGACATCTAGGTTCTGTTaGGATTTAAGTGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLTSRFC*DLSVGL
Trigger: GAGTCCCACACTTAAATCTCAACAGAACCTAGATGT...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGGACCAAGGGTTGGCCTaGGTGGATTCTGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWDQGLA*VDSASL
Trigger: TAAACTGGCAGAATCCACTCAGGCCAACCCTTGGTC...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTGGGCATCAGTTGGTTTaGCCTGCTGGAAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSGHQLV*PAGNVA
Trigger: AGCCACATTTCCAGCAGGGCAAACCAACTGATGCCC...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAATCATCCCGACATCGTTaGCGCCGTCTCCGATGGCGA +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQSSRHR*RRLRWR
Trigger: TCGCCATCGGAGACGGCGCCAACGATGTCGGGATGA...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTTATCTGAGTCTGCAGTaGAACAAGGAAAGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSYLSLQ*NKERRG
Trigger: CCCGCGCCTTTCCTTGTTCCACTGCAGACTCAGATA...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGCGTGTCAGTGTGCAGTaGAAACCCAGAACTAAGCCC +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWRVSVQ*KPRTKP
Trigger: GGGCTTAGTTCTGGGTTTCCACTGCACACTGACACG...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGTTGTCTCTCCTCAGTTaGGAGAGCCGAGGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWLSLLS*ESRGVP
Trigger: AGGAACACCTCGGCTCTCCCAACTGAGGAGAGACAA...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp AGCAACCTGCCTACAGTGAAGTCTGCATGTGGCCCGTaGGACTTAACCTCTGAGTTAACTCAACAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SNLPTVKSACGP*DLTSELTQQEA
Trigger: TGCTTCCTGTTGAGTTAACTCAGAGGTTAAGTCCAACGGGCCACATGCAGACTTCACTGTAGGCAGGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp GGCTATCTCTTAAGAATACAACAGACTCCAATCCCATaGGAAGTGAGTTCGCAGCCTGCTCTCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GYLLRIQQTPIP*EVSSQPALWAL
Trigger: GAGAGCCCAGAGAGCAGGCTGCGAACTCACTTCCAATGGGATTGGAGTCTGTTGTATTCTTAAGAGATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAGTTCAAGTTTCCAGTaGAGTCATAGAGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNSSSFQ*SHRGGG
Trigger: ACCGCCACCTCTATGACTTCACTGGAAACTTGAACT...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGACACGGCCAGAAGGGTaGGGAACTCCTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWTRPEG*GTPECK
Trigger: CTTGCATTCAGGAGTTCCTCACCCTTCTGGCCGTGT...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCTGCCTTCATTCCCACTaGTTCCCACACCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTACLHSH*FPHPRG
Trigger: CCCACGTGGGTGTGGGAATCAGTGGGAATGAAGGCA...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCCTGGGTGCAACAAACTaGATCTCTTTCCTAAGATCA +
Preference number: 4 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSLGATN*ISFLRS
Trigger: TGATCTTAGGAAAGAGATTCAGTTTGTTGCACCCAG...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGTGGTGTTTTGGCTGCTaGCGCCAGTCTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQWCFGC*RQSSLT
Trigger: TGTCAGAGAAGACTGGCGTCAGCAGCCAAAACACCA...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTGCAACCTGCCTACAGTaGAGTCTGCATGTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSATCLQ*SLHVAR
Trigger: ACGGGCCACATGCAGACTTCACTGTAGGCAGGTTGC...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCGTTCTACCACCACTCTaGCCTGTGGGGTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFVLPPL*PVGWPH
Trigger: ATGGGGCCACCCCACAGGTCAGAGTGGTGGTAGAAC...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGTTCATTTCCCAACAGTaGAAGTCCAAAATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLFISQQ*KSKMCS
Trigger: AGAGCACATTTTGGACTTTCACTGTTGGGAAATGAA...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGTTGGAGCCTCACCTGTaGATTGCATTGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWLEPHL*IALFCC
Trigger: GCAGCAGAACAATGCAATTCACAGGTGAGGCTCCAA...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTCCTTGAATTACTTTaGGACGATGACCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKLLELL*DDDPGQ
Trigger: CTGCCCAGGGTCATCGTCTCAAAGTAATTCAAGGAG...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGGTGCTGAGTAATGGCTaGCCTTGTGGCATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWVLSNG*PCGIQR
Trigger: TCTTTGGATGCCACAAGGGCAGCCATTACTCAGCAC...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGTCAGCCTCTTTCCATTaGTATCCCGCAGCACCGCTT +
Preference number: 4 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQSASFH*YPAAPL
Trigger: AAGCGGTGCTGCGGGATAGCAATGGAAAGAGGCTGA...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGTGCCGCAGCGGCCAATaGGGCAGCATCCGCGAACGC +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQCRSGQ*GSIRER
Trigger: GCGTTCGCGGATGCTGCCGCATTGGCCGCTGCGGCA...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTGGTCTCCAACAGACGTaGCCCGGGACATCTCATCCT +
Preference number: 4 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSGLQQT*PGTSHP
Trigger: AGGATGAGATGTCCCGGGCCACGTCTGTTGGAGACC...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTCAGGACCACATCTGCTaGAAGATACTGCCCATTGAC +
Preference number: 4 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLQDHIC*KILPID
Trigger: GTCAATGGGCAGTATCTTCCAGCAGATGTGGTCCTG...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGCAAGGGGCTGTGGGATaGCGATCCTCAATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQQGAVG*RSSMFF
Trigger: GAAGAACATTGAGGATCGCCATCCCACAGCCCCTTG...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAACCCACGTGGGCTGTCTaGATCATCCCGACATCGTTG +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQPTWAV*IIPTSL
Trigger: CAACGATGTCGGGATGATCCAGACAGCCCACGTGGG...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTAATCCGAGTTGTTGGTaGCCTGCATGCCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSNPSCW*PACLHS
Trigger: GGAATGAAGGCATGCAGGCCACCAACAACTCGGATT...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTACTGCAAAGATCTGGTaGCGATTCCTCTGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSTAKIW*RFLCVL
Trigger: GAGGACACAGAGGAATCGCCACCAGATCTTTGCAGT...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTCCAAAAATCTGGTTTaGCAACCAGAGCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSSKNLV*QPEQRT
Trigger: TGTTCTCTGCTCTGGTTGCCAAACCAGATTTTTGGA...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACGGCCATCCAAAAATCTaGTTTGGCAACCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNGHPKI*FGNQSR
Trigger: TCTGCTCTGGTTGCCAAACCAGATTTTTGGATGGCC...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCAAAGCACGTTTTGTATaGTGTGCCGAACCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSKARFV*CAEPKE
Trigger: CTCTTTTGGTTCGGCACACCATACAAAACGTGCTTT...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTCTAATGATGTCATTATaGGGGTCTTGGGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSLMMSL*GSWALT
Trigger: GGTGAGGGCCCAAGACCCCCATAATGACATCATTAG...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp TCCTTCCTTCTCCTTCTGAGGACTTCTGTGGTCGTCTaGTTCTCCCCACTCAATGTCCTATACTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: SFLLLLRTSVVV*FSPLNVLYSCI
Trigger: GATGCAAGAGTATAGGACATTGAGTGGGGAGAACAAGACGACCACAGAAGTCCTCAGAAGGAGAAGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp GGGTGTAAAAAGAATCCCTCTTTTGTCTCTCCTCAGTaGGGAGAGCCGAGGTGTTCCTCAGAGGTTAACACT +
Preference number: 4 (lower is better)
Translates to: GCKKNPSFVSPQ*GEPRCSSEVNT
Trigger: AGTGTTAACCTCTGAGGAACACCTCGGCTCTCCCAACTGAGGAGAGACAAAAGAGGGATTCTTTTTACACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTGAAGATACTGCCCATTaGCGACCTTCACAATGTCTC +
Preference number: 4 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSEDTAH*RPSQCL
Trigger: GAGACATTGTGAAGGTCGTCAATGGGCAGTATCTTC...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTTGGTTGAATTCTGCATaGGTTTGGTGTCGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSWLNSA*VWCRVQ
Trigger: CTGGACACGACACCAAACTCATGCAGAATTCAACCA...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTCAGTTCTTTTCACCATaGGACCTGTTCCAGTACAGG +
Preference number: 4 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLQFFSP*DLFQYR
Trigger: CCTGTACTGGAACAGGTCTCATGGTGAAAAGAACTG...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACACTCTTCCAACCGTTaGGCTCTGTCCTTCAATATG +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKHSSNR*ALSFNM
Trigger: CATATTGAAGGACAGAGCTCAACGGTTGGAAGAGTG...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAGCTCCGTGTTCTTCTTaGGAAAAAGCATACCCATGC +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKAPCSS*EKAYPC
Trigger: GCATGGGTATGCTTTTTCTCAAGAAGAACACGGAGC...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTAGTTGGGAAAGTCAGTaGTTCCGCTCTTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSSWESQ*FRSSLP
Trigger: AGGAAGTGAAGAGCGGAATCACTGACTTTCCCAACT...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGGAGTGTCTGGCGGAGTaGCAAGCCCCATGTGGCATT +
Preference number: 4 (lower is better)
Translates to: FPNSESPKCALKQTWVLMECLAE*QAPCGI
Trigger: AATGCCACATGGGGCTTGTCACTCCGCCAGACACTC...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGTGGAATATTCTGCACTaGGGCAGGACAGACACATCA +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWWNILH*GRTDTS
Trigger: TGATGTGTCTGTCCTGCCTCAGTGCAGAATATTCCA...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCAAGAGATATTTCACCTaGCCAAGCTCTTCATTAAGG +
Preference number: 4 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSKRYFT*PSSSLR
Trigger: CCTTAATGAAGAGCTTGGGCAGGTGAAATATCTCTT...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTAGAAGCAGTACAAGATaGACTTGGTCACCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSRSSTR*TWSPGC
Trigger: ACAACCGGGTGACCAAGTGCATCTTGTACTGCTTCT...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTAACAGGAAGCAAGTGTaGCCTGCTCCAATTACACAG +
Preference number: 4 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLNRKQV*PAPITQ
Trigger: CTGTGTAATTGGAGCAGGGCACACTTGCTTCCTGTT...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTTCTAATGTAAGTGGATaGCAAAGGCCCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSSNVSG*QRPSSL
Trigger: CAGACTGCTGGGCCTTTGGCATCCACTTACATTAGA...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTGAGTGTAACAGGGGATaGCATGTTTTGACTCGACCT +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSECNRG*HVLTRP
Trigger: AGGTCGAGTCAAAACATGGCATCCCCTGTTACACTC...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTCCAGGTCACAAGAACTaGCTATGGGCTAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSPGHKN*LWANLE
Trigger: CTCAAGATTAGCCCATAGGCAGTTCTTGTGACCTGG...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTGAGAGCACGTGGCTTTaGTCGCATGAGAAAGACGCC +
Preference number: 4 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSESTWL*SHEKDA
Trigger: GGCGTCTTTCTCATGCGAGCAAAGCCACGTGCTCTC...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGAGCCCTGCTTCCCTCTaGATCACCAGATTAAAACCT +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWSPASL*ITRLKP
Trigger: AGGTTTTAATCTGGTGATGCAGAGGGAAGCAGGGCT...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGTTGCCTGAGGTTCACTaGATGACAGCAGGACCACAT +
Preference number: 4 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQLPEVH*MTAGPH
Trigger: ATGTGGTCCTGCTGTCATCCAGTGAACCTCAGGCAA...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGTGTTTCCTGGTGTTTTaGCTGCTGACGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQCFLVF*LLTPVF
Trigger: GAAGACTGGCGTCAGCAGCCAAAACACCAGGAAACA...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGACACGGCGGCAGGACTaGGCCGAGTGCACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQTRRQD*AECTWR
Trigger: TCTCCAGGTGCACTCGGCCCAGTCCTGCCGCCGTGT...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCATCATGACAATTGTCTaGGTCTCAAGGCCTATTTCA +
Preference number: 4 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSIMTIV*VSRPIS
Trigger: TGAAATAGGCCTTGAGACCCAGACAATTGTCATGAT...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACATGCCAAAGACCCACTaGGTATTTCTAAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNMPKTH*VFLSCV
Trigger: TACACAGCTTAGAAATACTCAGTGGGTCTTTGGCAT...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGCCCCAGACAGCCAGATaGCTGAATTTAGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWPQTAR*LNLVQA
Trigger: AGCTTGGACTAAATTCAGTCATCTGGCTGTCTGGGG...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTGACGCCAGTCTTCTCTaGCAAAGATGTGTTAACACT +
Preference number: 4 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSDASLL*QRCVNT
Trigger: AGTGTTAACACATCTTTGTCAGAGAAGACTGGCGTC...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTCCTTCCTTCTCCTTCTaGGGACTTCTGTGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSPSFSF*GLLWSS
Trigger: AGACGACCACAGAAGTCCTCAGAAGGAGAAGGAAGG...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCAACAGAATTCTCAGCTaGGCTCTCCCAAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTANRILS*ALPKPR
Trigger: CCTGGGCTTTGGGAGAGCTCAGCTGAGAATTCTGTT...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTATTACTTTGAGACGATaGCCCTGGGCAGTAACTCAA +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSITLRR*PWAVTQ
Trigger: TTGAGTTACTGCCCAGGGTCATCGTCTCAAAGTAAT...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAACAATCCCATTGGAAGTaGGTTCGCAGCCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQQSHWK*VRSLLS
Trigger: AGAGAGCAGGCTGCGAACTCACTTCCAATGGGATTG...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGGAGAGCAAGGCATTGCACAGGCCTaGACTTGGCCATCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: QEVYANFTHKTGIKAGEQGIAQA*TWPSRA
Trigger: TGCCCGAGATGGCCAAGTTCAGGCCTGTGCAATGCC...TTGCTCTCCTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTAGTGGCTTTGCTCGCATaGGAAAGACGCCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVVALLA*ERRHKD
Trigger: ATCTTTGTGGCGTCTTTCTCATGCGAGCAAAGCCAC...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGTCTGCTGGAAGATACTaGCCATTGACGACCTTCACA +
Preference number: 4 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQSAGRY*PLTTFT
Trigger: TGTGAAGGTCGTCAATGGGCAGTATCTTCCAGCAGA...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTACAGCAGGACCACATCTaGTGGAAGATACTGCCCATT +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVQQDHI*WKILPI
Trigger: AATGGGCAGTATCTTCCAGCAGATGTGGTCCTGCTG...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp GATAGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACGCTTTGGTTGAATTCTaGATGAGTTTGGTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: DSFPCGLHSRFAREYVTNALVEF*MSLVSC
Trigger: ACACGACACCAAACTCATGCAGAATTCAACCAAAGC...GTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGGGTTTCTGGAACTCCTaGTTGAAGGCGATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWGFWNS*LKAIFY
Trigger: ATAGAAGATCGCCTTCAAGCAGGAGTTCCAGAAACC...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGACTATCTCAGACTTCTaGAGAGGAGACACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQTISDF*RGDTLQ
Trigger: CTGCAGAGTGTCTCCTCTGCAGAAGTCTGAGATAGT...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGAGTAAGGGCTCCAGGTaGTCACATTCATGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWSKGSR*SHSCLK
Trigger: CTTCAGGCATGAATGTGAGCACCTGGAGCCCTTACT...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTGCCCATTCAGATTTATaGTGGCTCAATGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLAHSDL*WLNALF
Trigger: GAAAAGGGCATTGAGCCAGCATAAATCTGAATGGGC...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGAGAGGGAAGCGGCATTaGACAGGCCTGAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVRGKRH*TGLNLA
Trigger: GGCCAAGTTCAGGCCTGTGCAATGCCGCTTCCCTCT...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGCTCTCTTGCCAATTCTaGGAAGTGACCATAGGTTAC +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWLSCQF*EVTIGY
Trigger: GTAACCTATGGTCACTTCCCAGAATTGGCAAGAGAG...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGGCGTACTTCAGGGTGTaGCCATCGATGATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVAYFRV*PSMIRA
Trigger: GGCCCTGATCATCGATGGCCACACCCTGAAGTACGC...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCGCACTGCAGACGAGTTaGGAGGGCAAAGATAGCTTC +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAALQTS*EGKDSF
Trigger: GAAGCTATCTTTGCCCTCCCAACTCGTCTGCAGTGC...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGAGTGAAGTCTGCATGTaGCCCGTTGGACTTAACCTC +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWSEVCM*PVGLNL
Trigger: GAGGTTAAGTCCAACGGGCCACATGCAGACTTCACT...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTCACAAGAACTGCCTATaGGCTAATCTTGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLHKNCL*ANLESM
Trigger: CATGCTCTCAAGATTAGCCCATAGGCAGTTCTTGTG...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTAAGACAGGAGAGCACGTaGCTTTGCTCGCATGAGAAA +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVRQEST*LCSHEK
Trigger: TTTCTCATGCGAGCAAAGCCACGTGCTCTCCTGTCT...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp GATATCTCAAAGGCAACTAGAGCCCGAGATTGTCACTaGAAAATGCGCCAGCCTGGGTGTAAAAAGAATCCC +
Preference number: 4 (lower is better)
Translates to: DISKATRARDCH*KMRQPGCKKNP
Trigger: GGGATTCTTTTTACACCCAGGCTGGCGCATTTTCAAGTGACAATCTCGGGCTCTAGTTGCCTTTGAGATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp GCTCTCTTGACCCCCAAGTTTCCTGGGCAGGGTTATTaGGATAGTGCTATTACTCCAACTTTCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ALLTPKFPGQGY*DSAITPTFFFL
Trigger: GAGGAAGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGGGGGTCAAGAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTCAACATTTGATCTCTTaGGAGGCGCTTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLQHLIS*EALWLN
Trigger: ATTCAACCAAAGCGCCTCTCAAGAGATCAAATGTTG...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTTCTGGAACTCCTGCTTaGAGGCGATCTTCTATGGCT +
Preference number: 4 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSSGTPA*RRSSMA
Trigger: AGCCATAGAAGATCGCCTTCAAGCAGGAGTTCCAGA...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTAAGGCGTTGATGCAGTaGCCCCAGAAAACCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSKALMQ*PQKTFV
Trigger: CACAAAGGTTTTCTGGGGTCACTGCATCAACGCCTT...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAATGGATCCCAGGAGATaGAGACTACATTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKMDPRR*RLHFKC
Trigger: GCATTTGAAATGTAGTCTTCATCTCCTGGGATCCAT...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTGCAGCTCTTCTAATCTaGTCATACAAGAATCGAGGT +
Preference number: 4 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSAALLI*SYKNRG
Trigger: ACCTCGATTCTTGTATGAGCAGATTAGAAGAGCTGC...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCGCTCAGGACCATAGTTaGCTGTCCTCTCATATCTGG +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAAQDHS*LSSHIW
Trigger: CCAGATATGAGAGGACAGGCAACTATGGTCCTGAGC...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAACGTTTTGTATGGTGTaGCGAACCAAAAGAGTTACC +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKTFCMV*RTKRVT
Trigger: GGTAACTCTTTTGGTTCGGCACACCATACAAAACGT...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTTATTATTTCAGGCTCTaGTTAGCCACCATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLYYFRL*LATISL
Trigger: CAGGGAAATGGTGGCTAAGCAGAGCCTGAAATAATA...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGGAGAGCAAAGTGAGTTCGCAGCCTaGTCTCTGGGCTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QEVYANFTHKTGIKAGEQSEFAA*SLGSLP
Trigger: AGGGAGAGAGCCCAGAGAGCAGGCTGCGAACTCACT...TTGCTCTCCTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTATTGATGTCCTGGCCATaGCAGGAGTGTCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVLMSWP*QECHFL
Trigger: TAGGAAATGACACTCCTGCCATGGCCAGGACATCAA...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACCTTCAATATGGTGCTaGCTTCCTGATAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKPSIWC*LPDRLS
Trigger: TGAAAGTCTATCAGGAAGCCAGCACCATATTGAAGG...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGGAGCAATGGGAATGGTaGGCCAGATGGTCGAGTAGA +
Preference number: 4 (lower is better)
Translates to: FPNSESPKCALKQTWVLMEQWEW*ARWSSR
Trigger: TCTACTCGACCATCTGGCCCACCATTCCCATTGCTC...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCCAGCAGTCTGGATGTTaGGAAGGGAGTATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAQQSGC*EGSIQS
Trigger: GCTCTGAATACTCCCTTCCCAACATCCAGACTGCTG...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAAAGGCCCAGCAGTCTaGATGTTGGGAAGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQKGPAV*MLGREY
Trigger: ATACTCCCTTCCCAACATCCAGACTGCTGGGCCTTT...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGCTATACTCTTGCATCTaGGTTTACTCATCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWLYSCI*VYSSSD
Trigger: GTCAGAGGATGAGTAAACCCAGATGCAAGAGTATAG...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGTTCTCCTCTGTATCTTaGCCATCACCTTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWFSSVS*PSPFWV
Trigger: CACCCAGAAAGGTGATGGCCAAGATACAGAGGAGAA...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGCCCCTGAGTTGGCCCTaGCTAAATATTATACATCAC +
Preference number: 4 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQPLSWP*LNIIHH
Trigger: GTGATGTATAATATTTAGCCAGGGCCAACTCAGGGG...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGCCCACAGTACAACTaGTCTCTTCCTTTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQSPQYN*SLPFAG
Trigger: CCCTGCAAAAGGAAGAGACCAGTTGTACTGTGGGCT...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCGTGTGTGTTGGGAGATaGGTGAACATAACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAVCVGR*VNITLV
Trigger: GACCAGGGTTATGTTCACCCATCTCCCAACACACAC...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGAGCTCACCAAGGCCATaGCCAAGAGGATGCCAAACA +
Preference number: 4 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVSSPRP*PRGCQT
Trigger: TGTTTGGCATCCTCTTGGTCATGGCCTTGGTGAGCT...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCAAGCCGAAGTCGTCCTaGAGGAGTTCGAACAATTAC +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAKPKSS*RSSNNY
Trigger: GTAATTGTTCGAACTCCTTCAGGACGACTTCGGCTT...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGAAAACCTTTGTGTTaGAGCCTTCGCCATTCTGGG +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQRKPLC*SLRHSG
Trigger: CCCAGAATGGCGAAGGCTTCAACACAAAGGTTTTCT...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTAGTTGGACTTAACCTCTaGGTTAACTCAACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVVGLNL*VNSTGS
Trigger: GCTTCCTGTTGAGTTAACTCAGAGGTTAAGTCCAAC...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGGAATGCTCAACCACATaGGAGGATAGAAAGGCATCT +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWECSTT*EDRKAS
Trigger: AGATGCCTTTCTATCCTCTCATGTGGTTGAGCATTC...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGAACAACACCAGGATCTaGACGTTAGTCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWNNTRI*TLVTFS
Trigger: TGAGAAGGTGACTAACGTGCAGATCCTGGTGTTGTT...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTACTTGGCTGCTCTCCATaGCACATCTTCAATCAAACA +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVLGCSP*HIFNQT
Trigger: TGTTTGATTGAAGATGTGGCATGGAGAGCAGCCAAG...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCGAAGCAAGTGTGCCCTaGTCCAATTACACAGGATGG +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFEASVP*SNYTGW
Trigger: CCATCCTGTGTAATTGGAGCAGGGCACACTTGCTTC...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAATGTGTTCCTTCGCTGTaGAGGCATGTTATAAATTCA +
Preference number: 4 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKCVPSL*RHVINS
Trigger: TGAATTTATAACATGCCTGCACAGCGAAGGAACACA...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGGAGAGCAACTGACAGCCAGCGTATaGAACCTAGTCCAGTCCACC +
Preference number: 4 (lower is better)
Translates to: QEVYANFTHKTGIKAGEQLTASV*NLVQST
Trigger: GGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAG...TTGCTCTCCTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGTGGCACGTGTCAGTGTaGAGTGGAAACCCAGAACTA +
Preference number: 4 (lower is better)
Translates to: FPNSESPKCALKQTWVLMWHVSV*SGNPEL
Trigger: TAGTTCTGGGTTTCCACTGCACACTGACACGTGCCA...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTCCCCGCATTTTTCACTaGTTCTTGACAAGTTATTAC +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSPRIFH*FLTSYY
Trigger: GTAATAACTTGTCAAGAAGCAGTGAAAAATGCGGGG...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTTTTGTTTGTGGCTTCTaGCCATTCAGATTTATGCTG +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSFVCGF*PFRFML
Trigger: CAGCATAAATCTGAATGGGCAGAAGCCACAAACAAA...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTTATTTGAAACAGGTTTaGGCAGACATACACCAGTCA +
Preference number: 4 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSYLKQV*ADIHQS
Trigger: TGACTGGTGTATGTCTGCGCAAACCTGTTTCAAATA...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCGAAGGCGATCTTCTATaGCTGTGGCTCCAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFEGDLL*LWLQVA
Trigger: TGCTACTTGGAGCCACAGCCATAGAAGATCGCCTTC...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGGAAAACTGTGCGATaGCGTAATCCGAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQRKTVR*RNPSCW
Trigger: CCAACAACTCGGATTACGCCATCGCACAGTTTTCCT...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGAAGAGGATGAGGGAGTaGACCAAGGCGTTGATGCAG +
Preference number: 4 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVKRMRE*TKALMQ
Trigger: CTGCATCAACGCCTTGGTCCACTCCCTCATCCTCTT...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGGCAAATTCTTCTCAATaGTCTCGTAACACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQANSSQ*SRNTLP
Trigger: TGGAAGAGTGTTACGAGATCATTGAGAAGAATTTGC...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGATGTGGCATTTTTGCTaGGCTGACAGCCAGCGTATG +
Preference number: 4 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVMWHFC*ADSQRM
Trigger: CATACGCTGGCTGTCAGCTCAGCAAAAATGCCACAT...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCAGGAGAGAAATTCCATaGCAGGGCTGGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTARREIP*QGWFPF
Trigger: AAAAGGAAACCAGCCCTGTCATGGAATTTCTCTCCT...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCTGCCTTCAACAGTGTTaGGATGGTTTCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFCLQQC*DGFWNS
Trigger: GGAGTTCCAGAAACCATCGCAACACTGTTGAAGGCA...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGCGCTTTGCACGAGAGTaGCAAATCCAGGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVRFARE*QIQETP
Trigger: AGGAGTTTCCTGGATTTGGCACTCTCGTGCAAAGCG...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTATCATCCAGACTACTCTaGTCTCCTGATACGTGTTTT +
Preference number: 4 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVSSRLL*SPDTCF
Trigger: AAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGA...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCAAGCCTGGAATATTCTaGACTGAGGCAGGACAGACA +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFKPGIF*TEAGQT
Trigger: TGTCTGTCCTGCCTCAGTGCAGAATATTCCAGGCTT...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCTTGGCCGTACTGATCTaGTTGTCGCGGAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFLAVLI*LSRNLL
Trigger: CAACAAATTCCGCGACAACCAGATCAGTACGGCCAA...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTTCAACAGTGTTGCGATaGTTTCTGGAACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSSTVLR*FLELLL
Trigger: AAGCAGGAGTTCCAGAAACCATCGCAACACTGTTGA...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGAGCTCTCATACACACTaGGCTGATCATGACAATTGT +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWSSHTH*ADHDNC
Trigger: ACAATTGTCATGATCAGCCCAGTGTGTATGAGAGCT...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp CATCACCTTTCTGGGTGTGCAAAGAAACCATACACCTaGGTTTGTCGTGTTAGTCATAGGCACATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: HHLSGCAKKPYT*VCRVSHRHILC
Trigger: ACACAAAATGTGCCTATGACTAACACGACAAACCAAGGTGTATGGTTTCTTTGCACACCCAGAAAGGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp CACATTCAATTCCAGTTTTCGTTTCTCCTCTGTATCTaGGCCATCACCTTTCTGGGTGTGCAAAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: HIQFQFSFLLCI*AITFLGVQRNH
Trigger: ATGGTTTCTTTGCACACCCAGAAAGGTGATGGCCAAGATACAGAGGAGAAACGAAAACTGGAATTGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp TCCTCTTTCTGTCATAAATCAAAGCCACCTGACACTTaGCGCCCGACTTTTAAAACAAACAGGTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSFCHKSKPPDT*RPTFKTNRSPF
Trigger: GAAAGGAGACCTGTTTGTTTTAAAAGTCGGGCGCAAAGTGTCAGGTGGCTTTGATTTATGACAGAAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGTTCATTTCCCCACAGTaGAAATCCAAAACATGCTCT +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWFISPQ*KSKTCS
Trigger: AGAGCATGTTTTGGATTTTCACTGTGGGGAAATGAA...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGCAGTGCACTGTAATGTaGTGCTGTAATTTAACAACC +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWQCTVM*CCNLTT
Trigger: GGTTGTTAAATTACAGCAGCACATTACAGTGCACTG...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCCATTCAGATTTATGCTaGCTCAATGCCCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAHSDLC*LNALFS
Trigger: GGAGAAAAGGGCATTGAGCCAGCATAAATCTGAATG...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCAGAGCATGTTTTTCTTaGTCTGAGGCCTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFRACFS*SEAWEK
Trigger: TTTCTCCCAGGCCTCAGACCAAGAAAAACATGCTCT...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp TGCCATGTTTTGACTCGACCTGATAAACTCATTTCTTaGCCAAGTTATTATTTCAGGCTCTGCTTAGCCACC +
Preference number: 4 (lower is better)
Translates to: CHVLTRPDKLIS*PSYYFRLCLAT
Trigger: GGTGGCTAAGCAGAGCCTGAAATAATAACTTGGCAAAGAAATGAGTTTATCAGGTCGAGTCAAAACATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCGTATCCAAAATTATCTaGGGTGGTGTCCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAVSKII*GGVHLL
Trigger: AAGAAGATGGACACCACCTCAGATAATTTTGGATAC...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAATTGTGTGTGACACTCTaGCCTCAATTTAAAGATAGG +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQLCVTL*PQFKDR
Trigger: CCTATCTTTAAATTGAGGTCAGAGTGTCACACACAA...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp CAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGGAGAGCAAACTGCCTTGAGCCAATaGAGAACCAAAACCAAACCC +
Preference number: 4 (lower is better)
Translates to: QEVYANFTHKTGIKAGEQTALSQ*RTKTKP
Trigger: GGGTTTGGTTTTGGTTCTTCATTGGCTCAAGGCAGT...TTGCTCTCCTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGGTCAACACAGTATCATaGTCCAGAGCTTTCATGGGA +
Preference number: 4 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVVNTVS*SRAFMG
Trigger: TCCCATGAAAGCTCTGGAGCATGATACTGTGTTGAC...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGTGTGTTAACACTGGGTaGAACAAACTGAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWCVNTG*NKLNLF
Trigger: AAAGAGATTCAGTTTGTTGCACCCAGTGTTAACACA...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAATTTCAGAGTTTCTACTaGAAAGATCTGGTGGCGATT +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQFQSFY*KDLVAI
Trigger: AATCGCCACCAGATCTTTGCAGTAGAAACTCTGAAA...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGTTCACCAGTAACAGTTaGCCACAAGTATTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: FPNSESPKCALKQTWVLMFTSNS*PQVFRP
Trigger: TGGCCTAAATACTTGTGGGCAACTGTTACTGGTGAA...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGTGCACTGTAATGTGCTaGTGTAATTTAACAACCAGA +
Preference number: 4 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWCTVMC*CNLTTR
Trigger: TCTGGTTGTTAAATTACAGCAGCACATTACAGTGCA...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGTGTTGCGATGGTTTCTaGAACTCCTGCTTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQCCDGF*NSCLKA
Trigger: CGCCTTCAAGCAGGAGTTCCAGAAACCATCGCAACA...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGTTGACAAGTTATTACTaGTTTTCACAGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVLTSYY*FSQPAP
Trigger: GGGAGCTGGCTGTGAAAATCAGTAATAACTTGTCAA...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAATTTCTTTTTGTTAACTaGATTGTCTGCCTTGTGTCG +
Preference number: 4 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQFLFVN*IVCLVS
Trigger: CGACACAAGGCAGACAATGCAGTTAACAAAAAGAAA...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGCCACGTCATTTTCCTTaGCCAGCAAATTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQPRHFP*PANSQG
Trigger: ACCTTGGGAATTTGCTGGGCAAGGAAAATGACGTGG...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGAATGTCCTATACTCTTaGATCTGGGTTTACTCATCC +
Preference number: 4 (lower is better)
Translates to: FPNSESPKCALKQTWVLMNVLYS*IWVYSS
Trigger: GGATGAGTAAACCCAGATGCAAGAGTATAGGACATT...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGACTGAGACAGTTAACTaGCTTGAGCCAATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVTETVN*LEPMKN
Trigger: GTTCTTCATTGGCTCAAGGCAGTTAACTGTCTCAGT...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGTCAATGGCACCAGGGTaGTATATCTTCCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQSMAPG*YIFLLE
Trigger: CTCCAACAGGAAGATATACCACCCTGGTGCCATTGA...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
3UTR CAA 72 bp TTTGTGTTAGAGTTCCTGCATGACAGTCCTTCCGTCTaGCTGGGTACTCTGATATTTAAAAATGTTCTATGC +
Preference number: 4 (lower is better)
Translates to: FVLEFLHDSPSV*LGTLIFKNVLC
Trigger: GCATAGAACATTTTTAAATATCAGAGTACCCAGCAAGACGGAAGGACTGTCATGCAGGAACTCTAACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGTTTATGAAAAGGGCTTaGGTATACTTCACAACCTCA +
Preference number: 4 (lower is better)
Translates to: FPNSESPKCALKQTWVLMFMKRA*VYFTTS
Trigger: TGAGGTTGTGAAGTATACTCAAGCCCTTTTCATAAA...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGATAAGGGCCATATTCTaGGATACCAATCGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQIRAIF*DTNRQE
Trigger: TTCCTGCCGATTGGTATCGCAGAATATGGCCCTTAT...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCTCTAATAGTCCTTCTTaGCCTTCAGGATGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFSNSPS*PSGWKN
Trigger: ATTTTTCCATCCTGAAGGCCAAGAAGGACTATTAGA...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR TCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGCTCACAGAGCACAGTTaGATGCTTCATAACGACATA +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQLTEHS*MLHNDI
Trigger: TATGTCGTTATGAAGCATTCAACTGTGCTCTGTGAG...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGTGTCCTTCAATATGGTaGTGGCTTCCTGATAGACTT +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQCPSIW*WLPDRL
Trigger: AAGTCTATCAGGAAGCCAGCACCATATTGAAGGACA...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCAACACCTTTCAAGAATaGCTAATGATGTCATTATGG +
Preference number: 4 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFNTFQE*LMMSLW
Trigger: CCATAATGACATCATTAGGCATTCTTGAAAGGTGTT...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGGCCCTGCTGGAAATGTaGCTAAGAGGTTCAAATAAA +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQALLEM*LRGSNK
Trigger: TTTATTTGAACCTCTTAGCCACATTTCCAGCAGGGC...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR GCA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGTGCGTCTGTCATCACTaGAAATATTGTTTAGTCTAC +
Preference number: 4 (lower is better)
Translates to: TAIKKFMPILHTKQESKQCVCHH*KYCLVY
Trigger: GTAGACTAAACAATATTTGCAGTGATGACAGACGCA...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 90 bp AGCTGGCGGGGACCGCCGGCGCCTGTGCCGGGCCGCGCCCGAGGCTaGGCCGTCCGTGCCGCAGCGGCCAATGCGGCAGCATCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: SWRGPPAPVPGRARG*AVRAAAANAAASAN
Trigger: GTTCGCGGATGCTGCCGCATTGGCCGCTGCGGCACGGACGGCGCAGCCTCGGGCGCGGCCCGGCACAGGCGCCGGCGGTCCCCGCCAGCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 90 bp CCTCGACCTCCGCGGCAGGGACATCTTAAGAGCTTTGTCCAGGCCTaGGCCGTTCAGCATCTCGCCCGTGTCGGGGGCTCGGCGGCCCCG +
Preference number: 5 (lower is better)
Translates to: PRPPRQGHLKSFVQA*AVQHLARVGGSAAP
Trigger: CGGGGCCGCCGAGCCCCCGACACGGGCGAGATGCTGAACGGCGCAGGCCTGGACAAAGCTCTTAAGATGTCCCTGCCGCGGAGGTCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381655.7
ENST00000682943.1
ENST00000683960.1
ENST00000684283.1
CDS CCA 90 bp TTCTGTCAGATGCAGTTTCCAGTGTGTGGAGCAGCCGAGGAGGAGTaGGGCTCCGGGGCACAGGGACCCGCCGTGCAGCACGGAGGGCAA +
Preference number: 5 (lower is better)
Translates to: FCQMQFPVCGAAEEE*GSGAQGPAVQHGGQ
Trigger: TTGCCCTCCGTGCTGCACGGCGGGTCCCTGTGCCCCGGAGCCCCACTCCTCCTCGGCTGCTCCACACACTGGAAACTGCATCTGACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491840.1
ENST00000683960.1
CDS GCA 90 bp GAGCAGCCGAGGAGGAGTGGGGCTCCGGGGCACAGGGACCCGCCGTaGAGCACGGAGGGCAATATCCAGCTAGTGTTTGTGTGCTCGTAT +
Preference number: 5 (lower is better)
Translates to: EQPRRSGAPGHRDPP*STEGNIQLVFVCSY
Trigger: ATACGAGCACACAAACACTAGCTGGATATTGCCCTCCGTGCTGCACGGCGGGTCCCTGTGCCCCGGAGCCCCACTCCTCCTCGGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491840.1
ENST00000683960.1
CDS GCA 90 bp AGTCCCTCCCTTAGCCAGCGCTTCCTGCTCGCTGAAGTGTGCATGTaGCCGGTCCATACCCGCGGGACCGTGGGCTTTTCAGGACACTTC +
Preference number: 5 (lower is better)
Translates to: SPSLSQRFLLAEVCM*PVHTRGTVGFSGHF
Trigger: GAAGTGTCCTGAAAAGCCCACGGTCCCGCGGGTATGGACCGGGCACATGCACACTTCAGCGAGCAGGAAGCGCTGGCTAAGGGAGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 90 bp TTGTGGAAAACGCCGTTTCCAGTCCCTCCCTTAGCCAGCGCTTCCTaGTCGCTGAAGTGTGCATGTGCCCGGTCCATACCCGCGGGACCG +
Preference number: 5 (lower is better)
Translates to: LWKTPFPVPPLASAS*SLKCACARSIPAGP
Trigger: CGGTCCCGCGGGTATGGACCGGGCACATGCACACTTCAGCGAGCAGGAAGCGCTGGCTAAGGGAGGGACTGGAAACGGCGTTTTCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS-3UTR CAA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAAGCCCGAGATTGTCACTaGAAAATGCGCCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: CVALEREAQREAALHRPEARDCH*KMRQPG
Trigger: CCCAGGCTGGCGCATTTTCAAGTGACAATCTCGGGC...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGTGCACAGGCCTGAACTaGGCCATCTCGGGCAACGGG +
Preference number: 5 (lower is better)
Translates to: FAELTASVCNLVQSTLPQCTGLN*AISGNG
Trigger: CCCGTTGCCCGAGATGGCCAAGTTCAGGCCTGTGCA...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 90 bp AAACACAGGAGGAGTGAGCCCGTGGCACCTGTCCCTCTGTGTAGCTaGCATCACCGACTGTCCACAGCTCCCTGTGCTGCCTGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: KHRRSEPVAPVPLCS*HHRLSTAPCAAWFQ
Trigger: CTGAAACCAGGCAGCACAGGGAGCTGTGGACAGTCGGTGATGGCAGCTACACAGAGGGACAGGTGCCACGGGCTCACTCCTCCTGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS-3UTR CAA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAATTTCCACAGCTACCCTaGCTGGCACGTGTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: CVALEREAQREAALHRPEFPQLP*LARVSV
Trigger: CACACTGACACGTGCCAGCAAGGGTAGCTGTGGAAA...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 90 bp ATCTCACCGGGTCTGGCTGAGCAATTGCCCTGGAAGGCATGGTTGTaGAAACACAGGAGGAGTGAGCCCGTGGCACCTGTCCCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: ISPGLAEQLPWKAWL*KHRRSEPVAPVPLC
Trigger: ACACAGAGGGACAGGTGCCACGGGCTCACTCCTCCTGTGTTTGCACAACCATGCCTTCCAGGGCAATTGCTCAGCCAGACCCGGTGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS-3UTR CAA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAATGTGGGACTCTGCAGTaGGGAAAGTCAGTGATTCCG +
Preference number: 5 (lower is better)
Translates to: CVALEREAQREAALHRPECGTLQ*GKSVIP
Trigger: CGGAATCACTGACTTTCCCAACTGCAGAGTCCCACA...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAAGCCCCAAAGCACGTTTaGTATGGTGTGCCGAACCAA +
Preference number: 5 (lower is better)
Translates to: CVALEREAQREAALHRPEAPKHV*YGVPNQ
Trigger: TTGGTTCGGCACACCATACAAAACGTGCTTTGGGGC...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS CCA 90 bp AAATGCAGACGTTTAATCTTTCTGTCAGATGCAGTTTCCAGTGTGTaGAGCAGCCGAGGAGGAGTGGGGCTCCGGGGCACAGGGACCCGC +
Preference number: 5 (lower is better)
Translates to: KCRRLIFLSDAVSSV*SSRGGVGLRGTGTR
Trigger: GCGGGTCCCTGTGCCCCGGAGCCCCACTCCTCCTCGGCTGCTCCACACACTGGAAACTGCATCTGACAGAAAGATTAAACGTCTGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491840.1
ENST00000683960.1
CDS-3UTR CAA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAACTGCCTTCAACAGTGTaGCGATGGTTTCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: CVALEREAQREAALHRPELPSTV*RWFLEL
Trigger: GAGTTCCAGAAACCATCGCAACACTGTTGAAGGCAG...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TGCACCTGGAGAGGGTGCGGAAGACTCTTCCAGGGCATCAGTTGGTTTGCCCTGGCCACGTCATTTTCCTaGCCCAGCAAATTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: CTWRGCGRLFQGISWFALATSFS*PSKFPR
Trigger: CCTTGGGAATTTGCTGGGCAAGGAAAATGACGTGGC...CAGGGCAAACCAACTGATGCCCTGGAAGAGTCTTCCGCACCCTCTCCAGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGCAGCATATGACCGCTTaGCACGAGAGTGCCAAATCC +
Preference number: 5 (lower is better)
Translates to: FAELTASVCNLVQSTLPQQHMTA*HESAKS
Trigger: GGATTTGGCACTCTCGTGCAAAGCGGTCATATGCTG...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAAAATGTTCTATGCACCTaGGGGAGAAAGAAATGGCCC +
Preference number: 5 (lower is better)
Translates to: CVALEREAQREAALHRPENVLCT*GRKKWP
Trigger: GGGCCATTTCTTTCTCCCCAAGGTGCATAGAACATT...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGGTCATTATGGGGGTCTaGGGCCCTCACCTCCGAAAC +
Preference number: 5 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLVIMGV*GPHLRN
Trigger: GTTTCGGAGGTGAGGGCCCAAGACCCCCATAATGAC...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS TCA 90 bp TCTGAGGTGGTGTCCATCTTCTTGATGTACCAGTTCTTTTCACCATaGGACCTGTTCCAGTACAGGGCCCCCGCCGAGCTCACCAAGGCC +
Preference number: 5 (lower is better)
Translates to: SEVVSIFLMYQFFSP*DLFQYRAPAELTKA
Trigger: GGCCTTGGTGAGCTCGGCGGGGGCCCTGTACTGGAACAGGTCTCATGGTGAAAAGAACTGGTACATCAAGAAGATGGACACCACCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683455.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
ENST00000684551.1
CDS TCA 90 bp TCCGGACTTCGAAGGAGAGCGCGTACTTCAGGGTGTGGCCATCGATaGTCAGGGCCACGTCATTTTCCTTGCCCAGCAAATTCCCAAGGT +
Preference number: 5 (lower is better)
Translates to: SGLRRRARTSGCGHR*SGPRHFPCPANSQG
Trigger: ACCTTGGGAATTTGCTGGGCAAGGAAAATGACGTGGCCCTGATCATCGATGGCCACACCCTGAAGTACGCGCTCTCCTTCGAAGTCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000491840.1
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS TCA 90 bp TCGTTCAGCCTGCGGATAAAGCAAGCGCGTCAGTCTCTTGTCACCTaGACACTCGGGTTGCACAAGGAGACAGACAGAAGGGGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: SFSLRIKQARQSLVT*TLGLHKETDRRGWD
Trigger: ATCCCACCCCCTTCTGTCTGTCTCCTTGTGCAACCCGAGTGTTCAGGTGACAAGAGACTGACGCGCTTGCTTTATCCGCAGGCTGAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 90 bp CTGCAGAGGAGACACTCTGCAGCATATGACCGCTTTGCACGAGAGTaGCAAATCCAGGAAACTCCTCCGGACTTCGAAGGAGAGCGCGTA +
Preference number: 5 (lower is better)
Translates to: LQRRHSAAYDRFARE*QIQETPPDFEGERV
Trigger: TACGCGCTCTCCTTCGAAGTCCGGAGGAGTTTCCTGGATTTGGCACTCTCGTGCAAAGCGGTCATATGCTGCAGAGTGTCTCCTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000381655.7
ENST00000491840.1
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684283.1
ENST00000684424.1
CDS GCA 90 bp TTGTGGGAACGTGAGGGGATACGGAGTTGTAGAAGAAGCTGCAGGTaGTTGAATCCCATGTACCCTGCCCCCGATCGATCAGTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LWEREGIRSCRRSCR*LNPMYPAPDRSVSL
Trigger: CAGGCTCACTGATCGATCGGGGGCAGGGTACATGGGATTCAAGCACCTGCAGCTTCTTCTACAACTCCGTATCCCCTCACGTTCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CCA 90 bp AGGAAACTCCTCCGGACTTCGAAGGAGAGCGCGTACTTCAGGGTGTaGCCATCGATGATCAGGGCCACGTCATTTTCCTTGCCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: RKLLRTSKESAYFRV*PSMIRATSFSLPSK
Trigger: TTTGCTGGGCAAGGAAAATGACGTGGCCCTGATCATCGATGGCCACACCCTGAAGTACGCGCTCTCCTTCGAAGTCCGGAGGAGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000491840.1
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS-3UTR CAA 90 bp TGCGTGGCCCTTGAGAGGGAGGCTCAGAGGGAAGCGGCATTGCACAGGCCTGAAATCGCAGTTTCTTGTTaGTCTCCTGTCAACACCCAT +
Preference number: 5 (lower is better)
Translates to: CVALEREAQREAALHRPEIAVSC*SPVNTH
Trigger: ATGGGTGTTGACAGGAGACAAACAAGAAACTGCGAT...TTCAGGCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS TCA 90 bp TGGGCCCTAATCCAGCATGGCTGCTGTCCTAATAAGAAGAGGAGATaGGGACACAGGCATACACGGAGGGAAGACCACAGAGCACACAGC +
Preference number: 5 (lower is better)
Translates to: WALIQHGCCPNKKRR*GHRHTRREDHRAHS
Trigger: GCTGTGTGCTCTGTGGTCTTCCCTCCGTGTATGCCTGTGTCCTCATCTCCTCTTCTTATTAGGACAGCAGCCATGCTGGATTAGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS-3UTR CAA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGGTGTTTCCTGGTGTTTaGGCTGCTGACGCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLVFPGV*AADASL
Trigger: AAGACTGGCGTCAGCAGCCAAAACACCAGGAAACAC...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp GGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTGCCAGACTTCTGTGGTCGTCTaGTTCTCCCCACTCAATGTC +
Preference number: 5 (lower is better)
Translates to: GLSVHSSRPRVGLSGFCQTSVVV*FSPLNV
Trigger: GACATTGAGTGGGGAGAACAAGACGACCACAGAAGT...CTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 90 bp AATGTGGCAGGTATAAAGAAGGGCCTGTCCTCCCTGTCCAACACGTaGCCAGCACTGGCCATGACTCCTGCACAAAATAAAGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: NVAGIKKGLSSLSNT*PALAMTPAQNKGHC
Trigger: ACAGTGCCCTTTATTTTGTGCAGGAGTCATGGCCAGTGCTGGGCACGTGTTGGACAGGGAGGACAGGCCCTTCTTTATACCTGCCACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 90 bp TTACGTTTGTGGGAACGTGAGGGGATACGGAGTTGTAGAAGAAGCTaGAGGTGCTTGAATCCCATGTACCCTGCCCCCGATCGATCAGTG +
Preference number: 5 (lower is better)
Translates to: LRLWEREGIRSCRRS*RCLNPMYPAPDRSV
Trigger: CACTGATCGATCGGGGGCAGGGTACATGGGATTCAAGCACCTGCAGCTTCTTCTACAACTCCGTATCCCCTCACGTTCCCACAAACGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS-3UTR CAA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGGCGGTGAAAATCACATaGTACAGGCCGATGCACCAA +
Preference number: 5 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLAVKIT*YRPMHQ
Trigger: TTGGTGCATCGGCCTGTACAATGTGATTTTCACCGC...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp GGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTGCCAGCAGAAAACCTTTGTGTaGAAGCCTTCGCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: GLSVHSSRPRVGLSGFCQQKTFV*KPSPFW
Trigger: CCAGAATGGCGAAGGCTTCAACACAAAGGTTTTCTG...CTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TATTATACATCACACGTAGTGACAGCTGCTCCTCCTAGAAACCAATTTACAGCCTTCCGGCCCAGCCTCTaGATCAGGCGGTCGCGCTCG +
Preference number: 5 (lower is better)
Translates to: YYTSHVVTAAPPRNQFTAFRPSL*IRRSRS
Trigger: CGAGCGCGACCGCCTGATCAAGAGGCTGGGCCGGAA...GGCTGTAAATTGGTTTCTAGGAGGAGCAGCTGTCACTACGTGTGATGTATAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGAGCTCCGTGTTCTTCTaGAGAAAAAGCATACCCATG +
Preference number: 5 (lower is better)
Translates to: FAELTASVCNLVQSTLPQSSVFF*RKSIPM
Trigger: CATGGGTATGCTTTTTCTCAAGAAGAACACGGAGCT...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCAGGCGCGGGTTTGGGTaGGCTGCCCATCGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFRRGFG*AAHRPP
Trigger: TGGCGGCCGATGGGCAGCCAACCCAAACCCGCGCCT...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp GGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTGCCAGATCATTCCTACAGGGTaGACTCATCCTCCGACTCTA +
Preference number: 5 (lower is better)
Translates to: GLSVHSSRPRVGLSGFCQIIPTG*THPPTL
Trigger: TAGAGTCGGAGGATGAGTCAACCCTGTAGGAATGAT...CTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp ACAATATTTAAGCAATCCAGGCACAGATGTGACAGCAGACAGGAGAGCACGTGGCAGAGGGAAGCGGCATaGCACAGGCCTGAACTTGGC +
Preference number: 5 (lower is better)
Translates to: TIFKQSRHRCDSRQESTWQREAA*HRPELG
Trigger: GCCAAGTTCAGGCCTGTGCAATGCCGCTTCCCTCTG...CCACGTGCTCTCCTGTCTGCTGTCACATCTGTGCCTGGATTGCTTAAATATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS TCA 90 bp TGTGTCTGTGAGCTCTTCTGGTGTCTCACAAGGGTCCCCATGTGTTaGAAGCTGCAGAGCGGATGGATGGGAGATCACACAGACCCTATT +
Preference number: 5 (lower is better)
Translates to: CVCELFWCLTRVPMC*KLQSGWMGDHTDPI
Trigger: AATAGGGTCTGTGTGATCTCCCATCCATCCGCTCTGCAGCTTTCAACACATGGGGACCCTTGTGAGACACCAGAAGAGCTCACAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS TCA 90 bp TGCTCTGGTTTGAATGCAGCCCGCAAAGCTCATGTGTTGAAAGTTTaGTCTCCAATGCAGTGGTGCTGGGAGCTGTGGCCTGATAGGAGG +
Preference number: 5 (lower is better)
Translates to: CSGLNAARKAHVLKV*SPMQWCWELWPDRR
Trigger: CCTCCTATCAGGCCACAGCTCCCAGCACCACTGCATTGGAGATCAAACTTTCAACACATGAGCTTTGCGGGCTGCATTCAAACCAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS TCA 90 bp TCTCCTCTTTCTTCCATGGGCCAAATTAATCTCACCGGGTCTGGCTaGGCAATTGCCCTGGAAGGCATGGTTGTGCAAACACAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SPLSSMGQINLTGSG*AIALEGMVVQTQEE
Trigger: CTCCTCCTGTGTTTGCACAACCATGCCTTCCAGGGCAATTGCTCAGCCAGACCCGGTGAGATTAATTTGGCCCATGGAAGAAAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 90 bp CTGCAAAGCTCCTTGCTGACAGGTGAAATCACACAGCCCTTACCATaGTCCAGAGCTTTCATGGGAAACCAGAAGAGGATGAGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: LQSSLLTGEITQPLP*SRAFMGNQKRMREW
Trigger: CCACTCCCTCATCCTCTTCTGGTTTCCCATGAAAGCTCTGGAGCATGGTAAGGGCTGTGTGATTTCACCTGTCAGCAAGGAGCTTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CCA 90 bp ATGTTTCCATTCACTGAAGAAGTAGCGGGAATGTGGACCACCAGCTaGACACAGCTGCTAAGGAATCATGAGCCACAGGGACTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: MFPFTEEVAGMWTTS*TQLLRNHEPQGLQQ
Trigger: CTGCTGCAGTCCCTGTGGCTCATGATTCCTTAGCAGCTGTGTCCAGCTGGTGGTCCACATTCCCGCTACTTCTTCAGTGAATGGAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS-3UTR CAA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGTCAACATTTGATCTCTaGAGAGGCGCTTTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: FAELTASVCNLVQSTLPQSTFDL*RGALVE
Trigger: TTCAACCAAAGCGCCTCTCAAGAGATCAAATGTTGA...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp GGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAGTGGATTCTGCCAGACACTCTTCCAACCGTaGAGCTCTGTCCTTCAATAT +
Preference number: 5 (lower is better)
Translates to: GLSVHSSRPRVGLSGFCQTLFQP*SSVLQY
Trigger: ATATTGAAGGACAGAGCTCAACGGTTGGAAGAGTGT...CTGGCAGAATCCACTCAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp ACTCAACACAGGACTGGGCTGTCTGTACACAGCAGTAGACCAAGGGTTGGCCTGAAGCCACCTGACACTTaGCGCCCGACTTTTAAAACA +
Preference number: 5 (lower is better)
Translates to: TQHRTGLSVHSSRPRVGLKPPDT*RPTFKT
Trigger: TGTTTTAAAAGTCGGGCGCAAAGTGTCAGGTGGCTT...CAGGCCAACCCTTGGTCTACTGCTGTGTACAGACAGCCCAGTCCTGTGTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGAAGAAACCATACACCTaGGTTTGTCGTGTTAGTCAT +
Preference number: 5 (lower is better)
Translates to: FAELTASVCNLVQSTLPQKKPYT*VCRVSH
Trigger: ATGACTAACACGACAAACCAAGGTGTATGGTTTCTT...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTTTTGTCTCTCCTCAGTaGGGAGAGCCGAGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLFVSPQ*GEPRCS
Trigger: GGAACACCTCGGCTCTCCCAACTGAGGAGAGACAAA...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS TCA 90 bp ACGTCATTTTCCTTGCCCAGCAAATTCCCAAGGTCAGTGCAGTGCTaGGTAATGGCTGCCCTTGTGGCATCCAAAGAGTCCTCCTTCAAT +
Preference number: 5 (lower is better)
Translates to: TSFSLPSKFPRSVQC*VMAALVASKESSFN
Trigger: ATTGAAGGAGGACTCTTTGGATGCCACAAGGGCAGCCATTACTCAGCACTGCACTGACCTTGGGAATTTGCTGGGCAAGGAAAATGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS GCA 90 bp CTCATCCTCTGCCTTCTTATAGCCCAAAGAAGAACGAACAGGTCCTaGAGAGACAGGGCGCAGGCAGAGAATACGACACAAAGAAGTCAA +
Preference number: 5 (lower is better)
Translates to: LILCLLIAQRRTNRS*RDRAQAENTTQRSQ
Trigger: TTGACTTCTTTGTGTCGTATTCTCTGCCTGCGCCCTGTCTCTGCAGGACCTGTTCGTTCTTCTTTGGGCTATAAGAAGGCAGAGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000684025.1
ENST00000684424.1
CDS GCA 90 bp TCGAGTATGGACTTCCAGCCTCCAGACTGTGACAAACTCAATTTCTaGTGTTTAAGCCACACAGCCTATGGCACTTTATTGCGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SSMDFQPPDCDKLNF*CLSHTAYGTLLRQP
Trigger: GGGCTGCCGCAATAAAGTGCCATAGGCTGTGTGGCTTAAACAGCAGAAATTGAGTTTGTCACAGTCTGGAGGCTGGAAGTCCATACTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS-3UTR CAA 90 bp TTTGCTGAGCTGACAGCCAGCGTATGCAACCTAGTCCAGTCCACCCTGCCCCAGATGAACGTCAGTAGGTaGTATCCAAAATTATCTGAG +
Preference number: 5 (lower is better)
Translates to: FAELTASVCNLVQSTLPQMNVSR*YPKLSE
Trigger: CTCAGATAATTTTGGATACAACCTACTGACGTTCAT...CTGGGGCAGGGTGGACTGGACTAGGTTGCATACGCTGGCTGTCAGCTCAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCATCATCCCGACATCGTaGGCGCCGTCTCCGATGGCG +
Preference number: 5 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFIIPTS*APSPMA
Trigger: CGCCATCGGAGACGGCGCCAACGATGTCGGGATGAT...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACCAGCAGTCTGGATGTaGGGAAGGGAGTATTCAGAG +
Preference number: 5 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKPAVWM*GREYSE
Trigger: CTCTGAATACTCCCTTCCCAACATCCAGACTGCTGG...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGAGGGCTCCAGGCAGGTaGTTTAGTAAGGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWRAPGR*FSKGSR
Trigger: CCTGGAGCCCTTACTAAACAACCTGCCTGGAGCCCT...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS TCA 90 bp ACGTCATTTTCCTTGCCCAGCAAATTCCCAAGGTCAGTGCAGTGCTaGGTAATGGCTGCCCTTGTGGCAGCTGTGAAATTCATAGAGACA +
Preference number: 5 (lower is better)
Translates to: TSFSLPSKFPRSVQC*VMAALVAAVKFIET
Trigger: TGTCTCTATGAATTTCACAGCTGCCACAAGGGCAGCCATTACTCAGCACTGCACTGACCTTGGGAATTTGCTGGGCAAGGAAAATGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491840.1
CDS TCA 90 bp AAGGGTGAGCCTCAGCTAGCTAAGCTTGGCAAAACGTCTCATGGCTaGGGAAGAAAAATACTTTCTCCATCCTTTCACACTGGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: KGEPQLAKLGKTSHG*GRKILSPSFHTGPP
Trigger: GGGAGGACCAGTGTGAAAGGATGGAGAAAGTATTTTTCTTCCTCAGCCATGAGACGTTTTGCCAAGCTTAGCTAGCTGAGGCTCACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 90 bp CTTGCCCAGCAAATTCCCAAGGTCAGTGCAGTGCTGAGTAATGGCTaGCCTTGTGGCAGCTGTGAAATTCATAGAGACACAAAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: LAQQIPKVSAVLSNG*PCGSCEIHRDTKQN
Trigger: ATTCTGCTTTGTGTCTCTATGAATTTCACAGCTGCCACAAGGGCAGCCATTACTCAGCACTGCACTGACCTTGGGAATTTGCTGGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491840.1
CDS-3UTR CAA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTTCTGCATGTGGCCCGTaGGACTTAACCTCTGAGTTA +
Preference number: 5 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSSACGP*DLTSEL
Trigger: TAACTCAGAGGTTAAGTCCAACGGGCCACATGCAGA...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp GACCGAGCCCGTTCTGATCAGCACAGAGTATTCATCCAGACTACTCTGCTCTCCCAATGTCCTATACTCTaGCATCTGGGTTTACTCATC +
Preference number: 5 (lower is better)
Translates to: DRARSDQHRVFIQTTLLSQCPIL*HLGLLI
Trigger: GATGAGTAAACCCAGATGCAAGAGTATAGGACATTG...GGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCTGATCAGAACGGGCTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAAGGAAGATACTGCCCATaGACGACCTTCACAATGTCT +
Preference number: 5 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKGRYCP*TTFTMS
Trigger: AGACATTGTGAAGGTCGTCAATGGGCAGTATCTTCC...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTAAGGATTCCGAATGTTaGTTCCTGTCCCATCGCTTC +
Preference number: 5 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLKDSEC*FLSHRF
Trigger: GAAGCGATGGGACAGGAACAAACATTCGGAATCCTT...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTTTCAGCCTCTTTCCATaGCTATCCCGCAGCACCGCT +
Preference number: 5 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSFSLFP*LSRSTA
Trigger: AGCGGTGCTGCGGGATAGCAATGGAAAGAGGCTGAA...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGCTTCCAGGGCATCAGTaGGTTTGCCCTGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWLPGHQ*VCPAGN
Trigger: ATTTCCAGCAGGGCAAACCAACTGATGCCCTGGAAG...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGAGGAAAGGCGCGGGTTaGGGTTGGCTGCCCATCGGC +
Preference number: 5 (lower is better)
Translates to: TAIKKFMPILHTKQESKQRKGAG*GWLPIG
Trigger: GCCGATGGGCAGCCAACCCAAACCCGCGCCTTTCCT...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGCTTCCCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACCTGGGCAGGGTTATTaGGATAGTGCTATTACTCCA +
Preference number: 5 (lower is better)
Translates to: SFPCGLHSRFAREYVTNKPGQGY*DSAITP
Trigger: TGGAGTAATAGCACTATCCAAATAACCCTGCCCAGG...TTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp GACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAAAGATCTGGGTAGATGCCCTCCGTTaGTATTCACTCCAGGAGGGA +
Preference number: 5 (lower is better)
Translates to: DNCLGLKAYFRVSTAKIWVDALR*YSLQEG
Trigger: TCCCTCCTGGAGTGAATACAAACGGAGGGCATCTAC...CCAGATCTTTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS TCA 90 bp AAACAACAGAAACCAAATCATTCAACAGACCCTCTCAGACTCTGCTaGCCCAGCAAAGCTCTGCAGATGACAATGGTCATAAGGCGCAGA +
Preference number: 5 (lower is better)
Translates to: KQQKPNHSTDPLRLC*PSKALQMTMVIRRR
Trigger: TCTGCGCCTTATGACCATTGTCATCTGCAGAGCTTTGCTGGGTCAGCAGAGTCTGAGAGGGTCTGTTGAATGATTTGGTTTCTGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS TCA 90 bp TCCCTGCCTTTCCTGAACCTATTCCCTTCAAGGTTGCCACTGCTGTaGAGACATGTGGAACTGTTCTGGAGCTTGGCTATTTCTATACTA +
Preference number: 5 (lower is better)
Translates to: SLPFLNLFPSRLPLL*RHVELFWSLAISIL
Trigger: TAGTATAGAAATAGCCAAGCTCCAGAACAGTTCCACATGTCTTCACAGCAGTGGCAACCTTGAAGGGAATAGGTTCAGGAAAGGCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CCA 90 bp CCTCCTCATGATGGGGCTTATGAGAATGTCACAGATCCTCAGAAATaGGAGGGATCATTGAAATTATACATGTTGGCCTCTCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: PPHDGAYENVTDPQK*EGSLKLYMLASHQA
Trigger: TGCCTGGTGAGAGGCCAACATGTATAATTTCAATGATCCCTCCCATTTCTGAGGATCTGTGACATTCTCATAAGCCCCATCATGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS-3UTR CAA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTATTGTCGCGGAATTTGTaGAGATGCGGTTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVLSRNL*RCGWLR
Trigger: CCTCAACCAACCGCATCTCAACAAATTCCGCGACAA...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTGTCAACACGCTGTACTaGGCCGTACTGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSVNTLY*AVLIWL
Trigger: CAACCAGATCAGTACGGCCAAGTACAGCGTGTTGAC...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGAGGGCATCAGTTGGTTaGCCCTGCTGGAAATGTGGC +
Preference number: 5 (lower is better)
Translates to: FPNSESPKCALKQTWVLMRASVG*PCWKCG
Trigger: GCCACATTTCCAGCAGGGCAAACCAACTGATGCCCT...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTATCCAAAAATCTGGTTaGGCAACCAGAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSIQKSG*ATRAEN
Trigger: GTTCTCTGCTCTGGTTGCCAAACCAGATTTTTGGAT...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGGACAGTCCTTCCGTCTaGCTGGGTACTCTGATATTT +
Preference number: 5 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQDSPSV*LGTLIF
Trigger: AAATATCAGAGTACCCAGCAAGACGGAAGGACTGTC...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGCACAGAGTATTCATCCAGACTACTCTGCTCTCCTGATACGTGTTTTCCACAGTTTCTCCTCTGTATCTaGGCCATCACCTTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: STEYSSRLLCSPDTCFPQFLLCI*AITFLG
Trigger: ACCCAGAAAGGTGATGGCCAAGATACAGAGGAGAAA...CTGTGGAAAACACGTATCAGGAGAGCAGAGTAGTCTGGATGAATACTCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTATCTGCTCCCATTTGTTaGTGGCTTCTGCCCATTCAG +
Preference number: 5 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVSAPIC*WLLPIQ
Trigger: CTGAATGGGCAGAAGCCACAAACAAATGGGAGCAGA...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAACAGACTCCAATCCCATaGGAAGTGAGTTCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQQTPIP*EVSSQP
Trigger: AGGCTGCGAACTCACTTCCAATGGGATTGGAGTCTG...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTCACCAGTCAACAGGATaGATCAAAGCCACAAATCAC +
Preference number: 5 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSHQSTG*IKATNH
Trigger: GTGATTTGTGGCTTTGATCAATCCTGTTGACTGGTG...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS TCA 90 bp CGTACTGAATGTCCACAGACTCTGCAAGATCAACGTGATGACAACTaGTGTCTTCACTTCCGGTTCCCGCATATGTTTAGTAATCCCACA +
Preference number: 5 (lower is better)
Translates to: RTECPQTLQDQRDDN*CLHFRFPHMFSNPT
Trigger: TGTGGGATTACTAAACATATGCGGGAACCGGAAGTGAAGACATCAGTTGTCATCACGTTGATCTTGCAGAGTCTGTGGACATTCAGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682942.1
ENST00000683845.1
CDS TCA 90 bp CCACTGTTCAGTTTGCATCTGAGCTTCTGCAAACAAACACTAGTGTaGAGGTACTCAGTGGAGGGGAACTTGTGCCATGTAAATCAGGTT +
Preference number: 5 (lower is better)
Translates to: PLFSLHLSFCKQTLV*RYSVEGNLCHVNQV
Trigger: AACCTGATTTACATGGCACAAGTTCCCCTCCACTGAGTACCTTCACACTAGTGTTTGTTTGCAGAAGCTCAGATGCAAACTGAACAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS-3UTR CAA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGGACATCTTAAGAGCTTaGTCCAGGCCTGCGCCGTTC +
Preference number: 5 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVDILRA*SRPAPF
Trigger: GAACGGCGCAGGCCTGGACAAAGCTCTTAAGATGTC...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTATTTGTTGAGATGCGGTaGGTTGAGGTAAATGGTGCG +
Preference number: 5 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVFVEMR*VEVNGA
Trigger: CGCACCATTTACCTCAACCAACCGCATCTCAACAAA...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTACTGCATTGTCTGCCTaGTGTCGCTTAAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLTALSA*CRLKSS
Trigger: AGAAGATTTTAAGCGACACAAGGCAGACAATGCAGT...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTTTTCAACATAACACATaGCCTGAGGTTCACTGGATG +
Preference number: 5 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSFQHNT*PEVHWM
Trigger: CATCCAGTGAACCTCAGGCAATGTGTTATGTTGAAA...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TCCAAAACATGCTCTCCACTCCCATTTTTCACCAGTAACAGTTGCCCACAAGTACTTTTCTGCTCCCATTaGTTTGTGGCTTCTGCCCAT +
Preference number: 5 (lower is better)
Translates to: SKTCSPLPFFTSNSCPQVLFCSH*FVASAH
Trigger: ATGGGCAGAAGCCACAAACAAATGGGAGCAGAAAAG...TACTTGTGGGCAACTGTTACTGGTGAAAAATGGGAGTGGAGAGCATGTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 90 bp GTGGCATCCAAAGAGTCCTCCTTCAATAGGATAAGGGCCATATTCTaGGATACCAATCGGCAGGAATACCCTATATTAATCGCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: VASKESSFNRIRAIF*DTNRQEYPILIAVS
Trigger: AGAAACTGCGATTAATATAGGGTATTCCTGCCGATTGGTATCGCAGAATATGGCCCTTATCCTATTGAAGGAGGACTCTTTGGATGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS GCA 90 bp CCCAGTCTGTTTATTTCTATAAGCCCAAAGGGACTGCTTGAAAACTaGCCAGGCAGGTCAAAGTGCTTTGATTTTTACTATCAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: PSLFISISPKGLLEN*PGRSKCFDFYYQAL
Trigger: GAGAGCCTGATAGTAAAAATCAAAGCACTTTGACCTGCCTGGGCAGTTTTCAAGCAGTCCCTTTGGGCTTATAGAAATAAACAGACTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS-3UTR CAA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGTGGTTGTCGCGGAATTaGTTGAGATGCGGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: FPNSESPKCALKQTWVLMWLSRN*LRCGWL
Trigger: CAACCAACCGCATCTCAACAAATTCCGCGACAACCA...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGGCCGTACTGATCTGGTaGTCGCGGAATTTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: FPNSESPKCALKQTWVLMAVLIW*SRNLLR
Trigger: TCTCAACAAATTCCGCGACAACCAGATCAGTACGGC...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp TGCTCTGAAACAAACGTGGGTTCTAATGTAAGTGGATGCCAAAGGCCCAGCAGTGTTTATGAAAAGGGCTaGAGTATACTTCACAACCTC +
Preference number: 5 (lower is better)
Translates to: CSETNVGSNVSGCQRPSSVYEKG*SILHNL
Trigger: GAGGTTGTGAAGTATACTCAAGCCCTTTTCATAAAC...ACTGCTGGGCCTTTGGCATCCACTTACATTAGAACCCACGTTTGTTTCAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCTTCTGGAACTCCTGCTaGAAGGCGATCTTCTATGGC +
Preference number: 5 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFFWNSC*KAIFYG
Trigger: GCCATAGAAGATCGCCTTCAAGCAGGAGTTCCAGAA...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp CCCTGTGGTCTGCACTCCAGGTTTGCGAGGGAATATGTAACTAACAAACTGCTTATTAATCGCAGTTTCTaGTTTGTCTCCTGTCAACAC +
Preference number: 5 (lower is better)
Translates to: PCGLHSRFAREYVTNKLLINRSF*FVSCQH
Trigger: GTGTTGACAGGAGACAAACAAGAAACTGCGATTAAT...AAGCAGTTTGTTAGTTACATATTCCCTCGCAAACCTGGAGTGCAGACCACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGTTTTTGCAGGTGTGCTaGGCTGCTCTCCATGCCACA +
Preference number: 5 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVFLQVC*AALHAT
Trigger: TGTGGCATGGAGAGCAGCCAAGCACACCTGCAAAAA...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AATTCTCAGCTGAGCTCTCCCAAAGCCCAGGTTCACTTCTCAGGATATTCCTCTACAAAGATGATGCATTaGAACGACAATTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: NSQLSSPKAQVHFSGYSSTKMMH*NDNSVT
Trigger: GGTCACTGAATTGTCGTTCAAATGCATCATCTTTGT...AGAGGAATATCCTGAGAAGTGAACCTGGGCTTTGGGAGAGCTCAGCTGAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 90 bp TTCCACACCTGTCCTGATTTCCCCACTTTGCTTGATTCTTCCTTCTaGTGGATTTCATGGCTAAACTTAAATATTACCTCCCCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: FHTCPDFPTLLDSSF*WISWLNLNITSPRK
Trigger: CTTCCTAGGGGAGGTAATATTTAAGTTTAGCCATGAAATCCAGCAGAAGGAAGAATCAAGCAAAGTGGGGAAATCAGGACAGGTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS GCA 90 bp ATAAGCCCAAAGGGACTGCTTGAAAACTGCCCAGGCAGGTCAAAGTaGTTTGATTTTTACTATCAGGCTCTCATTTCGCTTGTCATTACA +
Preference number: 5 (lower is better)
Translates to: ISPKGLLENCPGRSK*FDFYYQALISLVIT
Trigger: TGTAATGACAAGCGAAATGAGAGCCTGATAGTAAAAATCAAAGCACTTTGACCTGCCTGGGCAGTTTTCAAGCAGTCCCTTTGGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CCA 90 bp CACACCTGTCCTGATTTCCCCACTTTGCTTGATTCTTCCTTCTGCTaGATTTCATGGCTAAACTTAAATATTACCTCCCCTAGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: HTCPDFPTLLDSSFC*ISWLNLNITSPRKL
Trigger: TAGCTTCCTAGGGGAGGTAATATTTAAGTTTAGCCATGAAATCCAGCAGAAGGAAGAATCAAGCAAAGTGGGGAAATCAGGACAGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS-3UTR CAA 90 bp CAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGGAGAGCAAAGCCTCACCTGTGAATaGCATTGTTCTGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: QEVYANFTHKTGIKAGEQSLTCE*HCSAAP
Trigger: AGGGGCAGCAGAACAATGCAATTCACAGGTGAGGCT...TTGCTCTCCTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCAGGGGATGCCATGTTTaGACTCGACCTGATAAACTC +
Preference number: 5 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFRGCHV*TRPDKL
Trigger: GAGTTTATCAGGTCGAGTCAAAACATGGCATCCCCT...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 90 bp GAGTTATCCAAAGAGTCCTCCTTCAATAGGATAAGGGCCATATTCTaGGATACCAATCGGCAGGAATACCCTATATTAATCGCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: ELSKESSFNRIRAIF*DTNRQEYPILIAVS
Trigger: AGAAACTGCGATTAATATAGGGTATTCCTGCCGATTGGTATCGCAGAATATGGCCCTTATCCTATTGAAGGAGGACTCTTTGGATAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491840.1
ENST00000684551.1
CDS GCA 90 bp ACCTTGTACTGGAGTTATTCATTTGCAAATCTGCTCTGGTTTGAATaGAGCCCGCAAAGCTCATGTGTTGAAAGTTTGATCTCCAATGCA +
Preference number: 5 (lower is better)
Translates to: TLYWSYSFANLLWFE*SPQSSCVESLISNA
Trigger: TGCATTGGAGATCAAACTTTCAACACATGAGCTTTGCGGGCTGCATTCAAACCAGAGCAGATTTGCAAATGAATAACTCCAGTACAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CCA 90 bp GCTATTTGCAGACTCTTCTTAAGTACCAAAGCCTGGGCTCAGGTATaGAGGATAATTGCTCAAATTTCTCTTATGCTCATCAGACATACC +
Preference number: 5 (lower is better)
Translates to: AICRLFLSTKAWAQV*RIIAQISLMLIRHT
Trigger: GGTATGTCTGATGAGCATAAGAGAAATTTGAGCAATTATCCTCCATACCTGAGCCCAGGCTTTGGTACTTAAGAAGAGTCTGCAAATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CCA 90 bp TGGCTAGTTCATGCTATTTGCAGACTCTTCTTAAGTACCAAAGCCTaGGCTCAGGTATGGAGGATAATTGCTCAAATTTCTCTTATGCTC +
Preference number: 5 (lower is better)
Translates to: WLVHAICRLFLSTKA*AQVWRIIAQISLML
Trigger: GAGCATAAGAGAAATTTGAGCAATTATCCTCCATACCTGAGCCCAGGCTTTGGTACTTAAGAAGAGTCTGCAAATAGCATGAACTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS-3UTR CAA 90 bp TTTCCCAACAGTGAAAGTCCAAAATGTGCTCTGAAACAAACGTGGGTTCTAATGAAAAGAATCCCTCTTTaGTCTCTCCTCAGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: FPNSESPKCALKQTWVLMKRIPL*SLLSWE
Trigger: CTCCCAACTGAGGAGAGACAAAAGAGGGATTCTTTT...CATTAGAACCCACGTTTGTTTCAGAGCACATTTTGGACTTTCACTGTTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp AGTGATTCCGCTCTTCACTTCCTTGTCTTAGATAATTCAGGATATGCCGTATTCGCCTATGGGCTAATCTaGAGAGCATGTTTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SDSALHFLVLDNSGYAVFAYGLI*RACFSW
Trigger: CCAAGAAAAACATGCTCTCAAGATTAGCCCATAGGC...GAATACGGCATATCCTGAATTATCTAAGACAAGGAAGTGAAGAGCGGAATCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp CCAAGTTTCCTGGGCAGGGTTATTTGGATAGTGCTATTACTCCAACTTTCTTCTTTATTTGAAACAGGTTaGCGCAGACATACACCAGTC +
Preference number: 5 (lower is better)
Translates to: PSFLGRVIWIVLLLQLSSLFETG*RRHTPV
Trigger: GACTGGTGTATGTCTGCGCAAACCTGTTTCAAATAA...AGAAGAAAGTTGGAGTAATAGCACTATCCAAATAACCCTGCCCAGGAAACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS TCA 90 bp GACATACCATTTCCCATCACTAATCCTTCCTGCTACAATGATGGCTaGGTCTGTCACCAAAATATCACAGCCTCTGAAACAAAATCACAT +
Preference number: 5 (lower is better)
Translates to: DIPFPITNPSCYNDG*VCHQNITASETKSH
Trigger: ATGTGATTTTGTTTCAGAGGCTGTGATATTTTGGTGACAGACTCAGCCATCATTGTAGCAGGAAGGATTAGTGATGGGAAATGGTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS GCA 90 bp ACTCTTCTTAAGTACCAAAGCCTGGGCTCAGGTATGGAGGATAATTaGTCAAATTTCTCTTATGCTCATCAGACATACCATTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: TLLKYQSLGSGMEDN*SNFSYAHQTYHFPS
Trigger: TGATGGGAAATGGTATGTCTGATGAGCATAAGAGAAATTTGAGCAATTATCCTCCATACCTGAGCCCAGGCTTTGGTACTTAAGAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS-3UTR CAA 90 bp CTGATCATGACAATTGTCTGGGTCTCAAGGCCTATTTCAGAGTTTCTACTGCAATTTTTGTTAACTGCATaGTCTGCCTTGTGTCGCTTA +
Preference number: 5 (lower is better)
Translates to: LIMTIVWVSRPISEFLLQFLLTA*SALCRL
Trigger: TAAGCGACACAAGGCAGACAATGCAGTTAACAAAAA...TTGCAGTAGAAACTCTGAAATAGGCCTTGAGACCCAGACAATTGTCATGATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp CAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGGAGAGCAACAGAACTTCACGTGTTaGCATGTCAGCAGTGTGACT +
Preference number: 5 (lower is better)
Translates to: QEVYANFTHKTGIKAGEQQNFTC*HVSSVT
Trigger: AGTCACACTGCTGACATGCAAACACGTGAAGTTCTG...TTGCTCTCCTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 90 bp CTTAGGATAGGCTGGAAGACTGACCTGACGTTGGGAATGATACACTaGCAGTGTGTTAAAATGTTGGACAGTATATATATACATGTATAC +
Preference number: 5 (lower is better)
Translates to: LRIGWKTDLTLGMIH*QCVKMLDSIYIHVY
Trigger: GTATACATGTATATATATACTGTCCAACATTTTAACACACTGGCAGTGTATCATTCCCAACGTCAGGTCAGTCTTCCAGCCTATCCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS-3UTR CAA 90 bp AGATTAAAACCTCCCCATCACAAACAATATTTAAGCAATCCAGGCACAGATGTGCTGTGTGTGAAGGTCTaGTTTAAGCTCTCATACACA +
Preference number: 5 (lower is better)
Translates to: RLKPPHHKQYLSNPGTDVLCVKV*FKLSYT
Trigger: TGTGTATGAGAGCTTAAACAAGACCTTCACACACAG...CACATCTGTGCCTGGATTGCTTAAATATTGTTTGTGATGGGGAGGTTTTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS CCA 90 bp GACAAAGCTGATTCAAAGATAAGGTTTTCAGGAAAGGGACACCATTaGATTATGTTGAGAATATTCCAAGAAGACTACTCTGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: DKADSKIRFSGKGHH*IMLRIFQEDYSEED
Trigger: GTCCTCTTCAGAGTAGTCTTCTTGGAATATTCTCAACATAATCCAATGGTGTCCCTTTCCTGAAAACCTTATCTTTGAATCAGCTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683455.1
CDS CCA 90 bp CCTGATTTCCCCACTTTGCTTGATTCTTCCTTCTGCTGGATTTCATaGCTAAACTTAAATATTACCTCCCCTAGGAAGCTATTAATAACT +
Preference number: 5 (lower is better)
Translates to: PDFPTLLDSSFCWIS*LNLNITSPRKLLIT
Trigger: AGTTATTAATAGCTTCCTAGGGGAGGTAATATTTAAGTTTAGCCATGAAATCCAGCAGAAGGAAGAATCAAGCAAAGTGGGGAAATCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS TCA 90 bp GAAGGCAGGTATTATTTACAACTGAGGTTACATGAGAGACAAAGCTaGTTCAAAGATAAGGTTTTCAGGAAAGGGACACCATTGGATTAT +
Preference number: 5 (lower is better)
Translates to: EGRYYLQLRLHERQS*FKDKVFRKGTPLDY
Trigger: ATAATCCAATGGTGTCCCTTTCCTGAAAACCTTATCTTTGAATCAGCTTTGTCTCTCATGTAACCTCAGTTGTAAATAATACCTGCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683455.1
CDS-3UTR CAA 90 bp CAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGGAGAGCAAAGCCAATTTAGTCATTaGGCTGTAAGAATGCTCAAC +
Preference number: 5 (lower is better)
Translates to: QEVYANFTHKTGIKAGEQSQFSH*AVRMLN
Trigger: GTTGAGCATTCTTACAGCCAAATGACTAAATTGGCT...TTGCTCTCCTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS-3UTR CAA 90 bp ACTGCAATCAAGAAGTTTATGCCAATTTTACACACAAAACAGGAATCAAAGCAGTTAAAGTTCATGATATaGCATGTAAGCGTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: TAIKKFMPILHTKQESKQLKFMI*HVSVPV
Trigger: GACTGGAACGCTTACATGCAATATCATGAACTTTAA...CTGCTTTGATTCCTGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS GCA 72 bp GCCTGTGCCGGGCCGCGCCCGAGGCTGCGCCGTCCGTaGCGCAGCGGCCAATGCGGCAGCATCCGCGAACGC +
Preference number: 6 (lower is better)
Translates to: ACAGPRPRLRRP*RSGQCGSIRER
Trigger: GCGTTCGCGGATGCTGCCGCATTGGCCGCTGCGGCACGGACGGCGCAGCCTCGGGCGCGGCCCGGCACAGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381655.7
CDS CAA 90 bp GAGCTGCCCCGGAACAGCGTCGGGGGCGTCTTCCGGCCCAGCCTCTaGATCAGGCGGTCGCGCTCGTTCAGCCTGCGGATAAAGCAAGCG +
Preference number: 6 (lower is better)
Translates to: ELPRNSVGGVFRPSL*IRRSRSFSLRIKQA
Trigger: CGCTTGCTTTATCCGCAGGCTGAACGAGCGCGACCGCCTGATCAAGAGGCTGGGCCGGAAGACGCCCCCGACGCTGTTCCGGGGCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp CCCTCCCTTAGCCAGCGCTTCCTGCTCGCTGAAGTGTaGATGTGCCCGGTCCATACCCGCGGGACCGTGGGC +
Preference number: 6 (lower is better)
Translates to: PSLSQRFLLAEV*MCPVHTRGTVG
Trigger: GCCCACGGTCCCGCGGGTATGGACCGGGCACATGCACACTTCAGCGAGCAGGAAGCGCTGGCTAAGGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CCA 72 bp ATGCAGTTTCCAGTGTGTGGAGCAGCCGAGGAGGAGTaGGGCTCCGGGGCACAGGGACCCGCCGTGCAGCAC +
Preference number: 6 (lower is better)
Translates to: MQFPVCGAAEEE*GSGAQGPAVQH
Trigger: GTGCTGCACGGCGGGTCCCTGTGCCCCGGAGCCCCACTCCTCCTCGGCTGCTCCACACACTGGAAACTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491840.1
ENST00000683960.1
CDS CAA 72 bp CGGAACAGCGTCGGGGGCGTCTTCCGGCCCAGCCTCTaGATCAGGCGGTCGCGCTCGTTCAGCCTGCGGATA +
Preference number: 6 (lower is better)
Translates to: RNSVGGVFRPSL*IRRSRSFSLRI
Trigger: TATCCGCAGGCTGAACGAGCGCGACCGCCTGATCAAGAGGCTGGGCCGGAAGACGCCCCCGACGCTGTTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp CCGCGGCAGGGACATCTTAAGAGCTTTGTCCAGGCCTaGGCCGTTCAGCATCTCGCCCGTGTCGGGGGCTCG +
Preference number: 6 (lower is better)
Translates to: PRQGHLKSFVQA*AVQHLARVGGS
Trigger: CGAGCCCCCGACACGGGCGAGATGCTGAACGGCGCAGGCCTGGACAAAGCTCTTAAGATGTCCCTGCCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381655.7
ENST00000682943.1
ENST00000683960.1
ENST00000684283.1
CDS CAA 90 bp GACGAGCGGATCCTCGACCTCCGCGGCAGGGACATCTTAAGAGCTTaGTCCAGGCCTGCGCCGTTCAGCATCTCGCCCGTGTCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: DERILDLRGRDILRA*SRPAPFSISPVSGA
Trigger: AGCCCCCGACACGGGCGAGATGCTGAACGGCGCAGGCCTGGACAAAGCTCTTAAGATGTCCCTGCCGCGGAGGTCGAGGATCCGCTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381655.7
ENST00000682943.1
ENST00000683960.1
ENST00000684283.1
CDS GCA 72 bp AGGAGGAGTGGGGCTCCGGGGCACAGGGACCCGCCGTaGAGCACGGAGGGCAATATCCAGCTAGTGTTTGTG +
Preference number: 6 (lower is better)
Translates to: RRSGAPGHRDPP*STEGNIQLVFV
Trigger: CACAAACACTAGCTGGATATTGCCCTCCGTGCTGCACGGCGGGTCCCTGTGCCCCGGAGCCCCACTCCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491840.1
ENST00000683960.1
CDS GCA 72 bp AGGAGTGAGCCCGTGGCACCTGTCCCTCTGTGTAGCTaGCATCACCGACTGTCCACAGCTCCCTGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: RSEPVAPVPLCS*HHRLSTAPCAA
Trigger: GGCAGCACAGGGAGCTGTGGACAGTCGGTGATGGCAGCTACACAGAGGGACAGGTGCCACGGGCTCACTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS TCA 72 bp ACCGTGTGGCACACGGCCAGAAGGGTGAGGAACTCCTaGATGCAAGGGGCTGTGGGCATGGCCACCAAGGAG +
Preference number: 6 (lower is better)
Translates to: TVWHTARRVRNS*MQGAVGMATKE
Trigger: CTCCTTGGTGGCCATGCCCACAGCCCCTTGCATTCAGGAGTTCCTCACCCTTCTGGCCGTGTGCCACACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491840.1
CDS TCA 72 bp ACGTCGGGTAAGGCGTGGTGCTTCACCAGCGGCCCGTaGTTTCCAGCAGATGCCATCTGGGCGCCTCAATGC +
Preference number: 6 (lower is better)
Translates to: TSGKAWCFTSGP*FPADAIWAPQC
Trigger: GCATTGAGGCGCCCAGATGGCATCTGCTGGAAATCACGGGCCGCTGGTGAAGCACCACGCCTTACCCGACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp CTTAGCCAGCGCTTCCTGCTCGCTGAAGTGTGCATGTaGCCGGTCCATACCCGCGGGACCGTGGGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: LSQRFLLAEVCM*PVHTRGTVGFS
Trigger: TGAAAAGCCCACGGTCCCGCGGGTATGGACCGGGCACATGCACACTTCAGCGAGCAGGAAGCGCTGGCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp ACGCCGTTTCCAGTCCCTCCCTTAGCCAGCGCTTCCTaGTCGCTGAAGTGTGCATGTGCCCGGTCCATACCC +
Preference number: 6 (lower is better)
Translates to: TPFPVPPLASAS*SLKCACARSIP
Trigger: GGGTATGGACCGGGCACATGCACACTTCAGCGAGCAGGAAGCGCTGGCTAAGGGAGGGACTGGAAACGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CAA 72 bp ATCCTCGACCTCCGCGGCAGGGACATCTTAAGAGCTTaGTCCAGGCCTGCGCCGTTCAGCATCTCGCCCGTG +
Preference number: 6 (lower is better)
Translates to: ILDLRGRDILRA*SRPAPFSISPV
Trigger: CACGGGCGAGATGCTGAACGGCGCAGGCCTGGACAAAGCTCTTAAGATGTCCCTGCCGCGGAGGTCGAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381655.7
ENST00000682943.1
ENST00000683960.1
ENST00000684283.1
CDS TCA 72 bp ACCGTGTGGCACACGGCCAGAAGGGTGAGGAACTCCTaGATGCAAGGGGCTGTGGGATGGCGATCCTCAATG +
Preference number: 6 (lower is better)
Translates to: TVWHTARRVRNS*MQGAVGWRSSM
Trigger: CATTGAGGATCGCCATCCCACAGCCCCTTGCATTCAGGAGTTCCTCACCCTTCTGGCCGTGTGCCACACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683455.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
ENST00000684551.1
CDS CAA 90 bp CTTGGCCGTACTGATCTGGTTGTCGCGGAATTTGTTGAGATGCGGTaGGTTGAGGTAAATGGTGCGGGCGGGTGCCTCCAGCTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: LGRTDLVVAEFVEMR*VEVNGAGGCLQLVS
Trigger: GGAGACCAGCTGGAGGCACCCGCCCGCACCATTTACCTCAACCAACCGCATCTCAACAAATTCCGCGACAACCAGATCAGTACGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000281620.11
ENST00000381648.7
ENST00000381655.7
ENST00000682472.1
ENST00000682580.1
ENST00000683303.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS CCA 72 bp ACCCACCTAGCTCCCTCAGGGCCATCGAAAGAGGAGTaGGGCCCTGGCTCTTCTTCACAGTTCTTTGAGCTG +
Preference number: 6 (lower is better)
Translates to: THLAPSGPSKEE*GPGSSSQFFEL
Trigger: CAGCTCAAAGAACTGTGAAGAAGAGCCAGGGCCCCACTCCTCTTTCGATGGCCCTGAGGGAGCTAGGTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CAA 90 bp TGTGTCGCTTCTGATCTGGTTGTCGCGGAATTTGTTGAGATGCGGTaGGTTGAGGTAAATGGTGCGGGCGGGTGCCTCCAGCTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: CVASDLVVAEFVEMR*VEVNGAGGCLQLVS
Trigger: GGAGACCAGCTGGAGGCACCCGCCCGCACCATTTACCTCAACCAACCGCATCTCAACAAATTCCGCGACAACCAGATCAGAAGCGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682943.1
CDS CAA 90 bp TGGGAACGTGAGGGGATACGGAGTTGTAGAAGAAGCTGCAGGTGCTaGAATCCCATGTACCCTGCCCCCGATCGATCAGTGAGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: WEREGIRSCRRSCRC*NPMYPAPDRSVSLE
Trigger: CTCCAGGCTCACTGATCGATCGGGGGCAGGGTACATGGGATTCAAGCACCTGCAGCTTCTTCTACAACTCCGTATCCCCTCACGTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CCA 72 bp CTCCGGACTTCGAAGGAGAGCGCGTACTTCAGGGTGTaGCCATCGATGATCAGGGCCACGTCATTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: LRTSKESAYFRV*PSMIRATSFSL
Trigger: CAAGGAAAATGACGTGGCCCTGATCATCGATGGCCACACCCTGAAGTACGCGCTCTCCTTCGAAGTCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000491840.1
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS TCA 72 bp CGAAGGAGAGCGCGTACTTCAGGGTGTGGCCATCGATaGTCAGGGCCACGTCATTTTCCTTGCCCAGCAAAT +
Preference number: 6 (lower is better)
Translates to: RRRARTSGCGHR*SGPRHFPCPAN
Trigger: ATTTGCTGGGCAAGGAAAATGACGTGGCCCTGATCATCGATGGCCACACCCTGAAGTACGCGCTCTCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000491840.1
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS TCA 72 bp ACACACAGGCAGCAGAGCGGCTGCAAAGCTCCTTGCTaGCAGGTGAAATCACACAGCCCTTACCATGCTCCA +
Preference number: 6 (lower is better)
Translates to: THRQQSGCKAPC*QVKSHSPYHAP
Trigger: TGGAGCATGGTAAGGGCTGTGTGATTTCACCTGTCAGCAAGGAGCTTTGCAGCCGCTCTGCTGCCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS GCA 72 bp CGTGAGGGGATACGGAGTTGTAGAAGAAGCTGCAGGTaGTTGAATCCCATGTACCCTGCCCCCGATCGATCA +
Preference number: 6 (lower is better)
Translates to: REGIRSCRRSCR*LNPMYPAPDRS
Trigger: TGATCGATCGGGGGCAGGGTACATGGGATTCAAGCACCTGCAGCTTCTTCTACAACTCCGTATCCCCTCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp TGGGAACGTGAGGGGATACGGAGTTGTAGAAGAAGCTaGAGGTGCTTGAATCCCATGTACCCTGCCCCCGAT +
Preference number: 6 (lower is better)
Translates to: WEREGIRSCRRS*RCLNPMYPAPD
Trigger: ATCGGGGGCAGGGTACATGGGATTCAAGCACCTGCAGCTTCTTCTACAACTCCGTATCCCCTCACGTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CAA 72 bp ACTGATCTGGTTGTCGCGGAATTTGTTGAGATGCGGTaGGTTGAGGTAAATGGTGCGGGCGGGTGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: TDLVVAEFVEMR*VEVNGAGGCLQ
Trigger: CTGGAGGCACCCGCCCGCACCATTTACCTCAACCAACCGCATCTCAACAAATTCCGCGACAACCAGATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000281620.11
ENST00000381648.7
ENST00000381655.7
ENST00000682472.1
ENST00000682580.1
ENST00000683303.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS CAA 72 bp TCTGATCTGGTTGTCGCGGAATTTGTTGAGATGCGGTaGGTTGAGGTAAATGGTGCGGGCGGGTGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SDLVVAEFVEMR*VEVNGAGGCLQ
Trigger: CTGGAGGCACCCGCCCGCACCATTTACCTCAACCAACCGCATCTCAACAAATTCCGCGACAACCAGATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682943.1
CDS CAA 72 bp GTGAACACACAGGCAGCAGAGCGGCTGCAAAGCTCCTaGCTGACAGGTGAAATCACACAGCCCTTACCATGC +
Preference number: 6 (lower is better)
Translates to: VNTQAAERLQSS*LTGEITQPLPC
Trigger: GCATGGTAAGGGCTGTGTGATTTCACCTGTCAGCAAGGAGCTTTGCAGCCGCTCTGCTGCCTGTGTGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 72 bp CAGTGGTGCTGGGAGCTGTGGCCTGATAGGAGGTGTTaGGGTCATGGGGGCGCCACCCTCATGAATAAATTA +
Preference number: 6 (lower is better)
Translates to: QWCWELWPDRRC*GHGGATLMNKL
Trigger: TAATTTATTCATGAGGGTGGCGCCCCCATGACCCAAACACCTCCTATCAGGCCACAGCTCCCAGCACCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 72 bp GAGGGGATACGGAGTTGTAGAAGAAGCTGCAGGTGCTaGAATCCCATGTACCCTGCCCCCGATCGATCAGTG +
Preference number: 6 (lower is better)
Translates to: EGIRSCRRSCRC*NPMYPAPDRSV
Trigger: CACTGATCGATCGGGGGCAGGGTACATGGGATTCAAGCACCTGCAGCTTCTTCTACAACTCCGTATCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS TCA 72 bp GTGTCCATCTTCTTGATGTACCAGTTCTTTTCACCATaGGACCTGTTCCAGTACAGGGCCCCCGCCGAGCTC +
Preference number: 6 (lower is better)
Translates to: VSIFLMYQFFSP*DLFQYRAPAEL
Trigger: GAGCTCGGCGGGGGCCCTGTACTGGAACAGGTCTCATGGTGAAAAGAACTGGTACATCAAGAAGATGGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683455.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
ENST00000684551.1
CDS TCA 72 bp TCCTTGCCCAGCAAATTCCCAAGGTCAGTGCAGTGCTaGGTAATGGCTGCCCTTGTGGCATCCAAAGAGTCC +
Preference number: 6 (lower is better)
Translates to: SLPSKFPRSVQC*VMAALVASKES
Trigger: GGACTCTTTGGATGCCACAAGGGCAGCCATTACTCAGCACTGCACTGACCTTGGGAATTTGCTGGGCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS TCA 72 bp GAGCTCTTCTGGTGTCTCACAAGGGTCCCCATGTGTTaGAAGCTGCAGAGCGGATGGATGGGAGATCACACA +
Preference number: 6 (lower is better)
Translates to: ELFWCLTRVPMC*KLQSGWMGDHT
Trigger: TGTGTGATCTCCCATCCATCCGCTCTGCAGCTTTCAACACATGGGGACCCTTGTGAGACACCAGAAGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS TCA 72 bp CTGCGGATAAAGCAAGCGCGTCAGTCTCTTGTCACCTaGACACTCGGGTTGCACAAGGAGACAGACAGAAGG +
Preference number: 6 (lower is better)
Translates to: LRIKQARQSLVT*TLGLHKETDRR
Trigger: CCTTCTGTCTGTCTCCTTGTGCAACCCGAGTGTTCAGGTGACAAGAGACTGACGCGCTTGCTTTATCCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp CTGGATGACAGCAGGACCACATCTGCTGGAAGATACTaGCCATTGACGACCTTCACAATGTCTCCCACTGCC +
Preference number: 6 (lower is better)
Translates to: LDDSRTTSAGRY*PLTTFTMSPTA
Trigger: GGCAGTGGGAGACATTGTGAAGGTCGTCAATGGGCAGTATCTTCCAGCAGATGTGGTCCTGCTGTCATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000682472.1
ENST00000682580.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS GCA 72 bp TCTGGTGTCTCACAAGGGTCCCCATGTGTTGAAAGCTaGAGAGCGGATGGATGGGAGATCACACAGACCCTA +
Preference number: 6 (lower is better)
Translates to: SGVSQGSPCVES*RADGWEITQTL
Trigger: TAGGGTCTGTGTGATCTCCCATCCATCCGCTCTGCAGCTTTCAACACATGGGGACCCTTGTGAGACACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS CCA 72 bp GACTCAGCTGTGTCAAATAACTTGACAAAGGTCAGATaGGGCTTTGCTGGCAGGGCTCCTGTGCTGGCAGAC +
Preference number: 6 (lower is better)
Translates to: DSAVSNNLTKVR*GFAGRAPVLAD
Trigger: GTCTGCCAGCACAGGAGCCCTGCCAGCAAAGCCCCATCTGACCTTTGTCAAGTTATTTGACACAGCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CAA 72 bp TTCTGCAGAGGAGACACTCTGCAGCATATGACCGCTTaGCACGAGAGTGCCAAATCCAGGAAACTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: FCRGDTLQHMTA*HESAKSRKLLR
Trigger: CCGGAGGAGTTTCCTGGATTTGGCACTCTCGTGCAAAGCGGTCATATGCTGCAGAGTGTCTCCTCTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000381655.7
ENST00000491840.1
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684283.1
ENST00000684424.1
CDS CAA 72 bp TGGGCCAAATTAATCTCACCGGGTCTGGCTGAGCAATaGCCCTGGAAGGCATGGTTGTGCAAACACAGGAGG +
Preference number: 6 (lower is better)
Translates to: WAKLISPGLAEQ*PWKAWLCKHRR
Trigger: CCTCCTGTGTTTGCACAACCATGCCTTCCAGGGCAATTGCTCAGCCAGACCCGGTGAGATTAATTTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CAA 90 bp TCTCCAATGCAGTGGTGCTGGGAGCTGTGGCCTGATAGGAGGTGTTaGGGTCATGGGGGCGCCACCCTCATGAATAAATTAATGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SPMQWCWELWPDRRC*GHGGATLMNKLMLL
Trigger: CAACAGCATTAATTTATTCATGAGGGTGGCGCCCCCATGACCCAAACACCTCCTATCAGGCCACAGCTCCCAGCACCACTGCATTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 90 bp TTTCTTCCATGGGCCAAATTAATCTCACCGGGTCTGGCTGAGCAATaGCCCTGGAAGGCATGGTTGTGCAAACACAGGAGGAGTGAGCCC +
Preference number: 6 (lower is better)
Translates to: FLPWAKLISPGLAEQ*PWKAWLCKHRRSEP
Trigger: GGGCTCACTCCTCCTGTGTTTGCACAACCATGCCTTCCAGGGCAATTGCTCAGCCAGACCCGGTGAGATTAATTTGGCCCATGGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS TCA 72 bp TCCTTGCCCAGCAAATTCCCAAGGTCAGTGCAGTGCTaGGTAATGGCTGCCCTTGTGGCAGCTGTGAAATTC +
Preference number: 6 (lower is better)
Translates to: SLPSKFPRSVQC*VMAALVAAVKF
Trigger: GAATTTCACAGCTGCCACAAGGGCAGCCATTACTCAGCACTGCACTGACCTTGGGAATTTGCTGGGCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491840.1
CDS GCA 72 bp TGGAAACCCTTAATTTGCACATCCCGTGGAAATCCCTaGCGCGGTGTTTTCCTTCCACTCCATCTCTTGCCC +
Preference number: 6 (lower is better)
Translates to: WKPLICTSRGNP*RGVFLPLHLLP
Trigger: GGGCAAGAGATGGAGTGGAAGGAAAACACCGCGGCAGGGATTTCCACGGGATGTGCAAATTAAGGGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS GCA 72 bp GGTATAAAGAAGGGCCTGTCCTCCCTGTCCAACACGTaGCCAGCACTGGCCATGACTCCTGCACAAAATAAA +
Preference number: 6 (lower is better)
Translates to: GIKKGLSSLSNT*PALAMTPAQNK
Trigger: TTTATTTTGTGCAGGAGTCATGGCCAGTGCTGGGCACGTGTTGGACAGGGAGGACAGGCCCTTCTTTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CCA 72 bp CTCTCTCACTTACAGGCCTGTCAGAAACTAAACCACTaGCGACAATTCAGCCCTGGGACTCTCACAGAGCTC +
Preference number: 6 (lower is better)
Translates to: LSHLQACQKLNH*RQFSPGTLTEL
Trigger: GAGCTCTGTGAGAGTCCCAGGGCTGAATTGTCGCCAGTGGTTTAGTTTCTGACAGGCCTGTAAGTGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS TCA 72 bp TTGAATGCAGCCCGCAAAGCTCATGTGTTGAAAGTTTaGTCTCCAATGCAGTGGTGCTGGGAGCTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LNAARKAHVLKV*SPMQWCWELWP
Trigger: AGGCCACAGCTCCCAGCACCACTGCATTGGAGATCAAACTTTCAACACATGAGCTTTGCGGGCTGCATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS TCA 72 bp TCTTCCATGGGCCAAATTAATCTCACCGGGTCTGGCTaGGCAATTGCCCTGGAAGGCATGGTTGTGCAAACA +
Preference number: 6 (lower is better)
Translates to: SSMGQINLTGSG*AIALEGMVVQT
Trigger: TGTTTGCACAACCATGCCTTCCAGGGCAATTGCTCAGCCAGACCCGGTGAGATTAATTTGGCCCATGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS TCA 72 bp ATCCAGCATGGCTGCTGTCCTAATAAGAAGAGGAGATaGGGACACAGGCATACACGGAGGGAAGACCACAGA +
Preference number: 6 (lower is better)
Translates to: IQHGCCPNKKRR*GHRHTRREDHR
Trigger: TCTGTGGTCTTCCCTCCGTGTATGCCTGTGTCCTCATCTCCTCTTCTTATTAGGACAGCAGCCATGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp TGCCTTCTTATAGCCCAAAGAAGAACGAACAGGTCCTaGAGAGACAGGGCGCAGGCAGAGAATACGACACAA +
Preference number: 6 (lower is better)
Translates to: CLLIAQRRTNRS*RDRAQAENTTQ
Trigger: TTGTGTCGTATTCTCTGCCTGCGCCCTGTCTCTGCAGGACCTGTTCGTTCTTCTTTGGGCTATAAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000684025.1
ENST00000684424.1
CDS TCA 72 bp CAGGTGAGAAAACAGACTCAGCTGTGTCAAATAACTTaGCAAAGGTCAGATGGGGCTTTGCTGGCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: QVRKQTQLCQIT*QRSDGALLAGL
Trigger: GAGCCCTGCCAGCAAAGCCCCATCTGACCTTTGTCAAGTTATTTGACACAGCTGAGTCTGTTTTCTCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp TCCTTGCTGACAGGTGAAATCACACAGCCCTTACCATaGTCCAGAGCTTTCATGGGAAACCAGAAGAGGATG +
Preference number: 6 (lower is better)
Translates to: SLLTGEITQPLP*SRAFMGNQKRM
Trigger: CATCCTCTTCTGGTTTCCCATGAAAGCTCTGGAGCATGGTAAGGGCTGTGTGATTTCACCTGTCAGCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CCA 72 bp ATGATGCCTTTGGAAACCCTTAATTTGCACATCCCGTaGAAATCCCTGCCGCGGTGTTTTCCTTCCACTCCA +
Preference number: 6 (lower is better)
Translates to: MMPLETLNLHIP*KSLPRCFPSTP
Trigger: TGGAGTGGAAGGAAAACACCGCGGCAGGGATTTCCACGGGATGTGCAAATTAAGGGTTTCCAAAGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS TCA 72 bp CAACAAGGCTTTTCCCATCTAAGTTCAAGTTTCCAGTaGAGTCATAGAGGTGGCGGTTGGGCCCTTCACACT +
Preference number: 6 (lower is better)
Translates to: QQGFSHLSSSFQ*SHRGGGWALHT
Trigger: AGTGTGAAGGGCCCAACCGCCACCTCTATGACTTCACTGGAAACTTGAACTTAGATGGGAAAAGCCTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000682472.1
ENST00000682580.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
CDS GCA 72 bp CAAATTCCCAAGGTCAGTGCAGTGCTGAGTAATGGCTaGCCTTGTGGCAGCTGTGAAATTCATAGAGACACA +
Preference number: 6 (lower is better)
Translates to: QIPKVSAVLSNG*PCGSCEIHRDT
Trigger: TGTGTCTCTATGAATTTCACAGCTGCCACAAGGGCAGCCATTACTCAGCACTGCACTGACCTTGGGAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491840.1
CDS CAA 72 bp TTGGACAAAAATAAAGACCTGCAGCATATGACCGCTTaGCACGAGAGTGCCAAATCCAGGAAACTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: LDKNKDLQHMTA*HESAKSRKLLR
Trigger: CCGGAGGAGTTTCCTGGATTTGGCACTCTCGTGCAAAGCGGTCATATGCTGCAGGTCTTTATTTTTGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281620.11
ENST00000684025.1
CDS CAA 90 bp GTGGTAAGGGGTCTTCAGAGAGTACTTGTGGCTAGTTCATGCTATTaGCAGACTCTTCTTAAGTACCAAAGCCTGGGCTCAGGTATGGAG +
Preference number: 6 (lower is better)
Translates to: VVRGLQRVLVASSCY*QTLLKYQSLGSGME
Trigger: CTCCATACCTGAGCCCAGGCTTTGGTACTTAAGAAGAGTCTGCAAATAGCATGAACTAGCCACAAGTACTCTCTGAAGACCCCTTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 90 bp GCCCAAAGGGACTGCTTGAAAACTGCCCAGGCAGGTCAAAGTGCTTaGATTTTTACTATCAGGCTCTCATTTCGCTTGTCATTACAGGAG +
Preference number: 6 (lower is better)
Translates to: AQRDCLKTAQAGQSA*IFTIRLSFRLSLQE
Trigger: CTCCTGTAATGACAAGCGAAATGAGAGCCTGATAGTAAAAATCAAAGCACTTTGACCTGCCTGGGCAGTTTTCAAGCAGTCCCTTTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS TCA 72 bp TTCCTGAACCTATTCCCTTCAAGGTTGCCACTGCTGTaGAGACATGTGGAACTGTTCTGGAGCTTGGCTATT +
Preference number: 6 (lower is better)
Translates to: FLNLFPSRLPLL*RHVELFWSLAI
Trigger: AATAGCCAAGCTCCAGAACAGTTCCACATGTCTTCACAGCAGTGGCAACCTTGAAGGGAATAGGTTCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CCA 72 bp CAAACTCAATTTCTGCTGTTTAAGCCACACAGCCTATaGCACTTTATTGCGGCAGCCCAGGCAGACAAATAC +
Preference number: 6 (lower is better)
Translates to: QTQFLLFKPHSL*HFIAAAQADKY
Trigger: GTATTTGTCTGCCTGGGCTGCCGCAATAAAGTGCCATAGGCTGTGTGGCTTAAACAGCAGAAATTGAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS TCA 72 bp TGTCCACAGACTCTGCAAGATCAACGTGATGACAACTaGTGTCTTCACTTCCGGTTCCCGCATATGTTTAGT +
Preference number: 6 (lower is better)
Translates to: CPQTLQDQRDDN*CLHFRFPHMFS
Trigger: ACTAAACATATGCGGGAACCGGAAGTGAAGACATCAGTTGTCATCACGTTGATCTTGCAGAGTCTGTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682942.1
ENST00000683845.1
CDS TCA 72 bp AGTTTGCATCTGAGCTTCTGCAAACAAACACTAGTGTaGAGGTACTCAGTGGAGGGGAACTTGTGCCATGTA +
Preference number: 6 (lower is better)
Translates to: SLHLSFCKQTLV*RYSVEGNLCHV
Trigger: TACATGGCACAAGTTCCCCTCCACTGAGTACCTTCACACTAGTGTTTGTTTGCAGAAGCTCAGATGCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS GCA 72 bp GTCTTCAGAGAGTACTTGTGGCTAGTTCATGCTATTTaGAGACTCTTCTTAAGTACCAAAGCCTGGGCTCAG +
Preference number: 6 (lower is better)
Translates to: VFREYLWLVHAI*RLFLSTKAWAQ
Trigger: CTGAGCCCAGGCTTTGGTACTTAAGAAGAGTCTGCAAATAGCATGAACTAGCCACAAGTACTCTCTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 72 bp CCTCAGAAATGGGAGGGATCATTGAAATTATACATGTaGGCCTCTCACCAGGCAGGTGAGAAAACAGACTCA +
Preference number: 6 (lower is better)
Translates to: PQKWEGSLKLYM*ASHQAGEKTDS
Trigger: TGAGTCTGTTTTCTCACCTGCCTGGTGAGAGGCCAACATGTATAATTTCAATGATCCCTCCCATTTCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CAA 72 bp GAGAATGTCACAGATCCTCAGAAATGGGAGGGATCATaGAAATTATACATGTTGGCCTCTCACCAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: ENVTDPQKWEGS*KLYMLASHQAG
Trigger: ACCTGCCTGGTGAGAGGCCAACATGTATAATTTCAATGATCCCTCCCATTTCTGAGGATCTGTGACATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp GTAAGGGGTCTTCAGAGAGTACTTGTGGCTAGTTCATaGTATTTGCAGACTCTTCTTAAGTACCAAAGCCTG +
Preference number: 6 (lower is better)
Translates to: VRGLQRVLVASS*YLQTLLKYQSL
Trigger: CAGGCTTTGGTACTTAAGAAGAGTCTGCAAATAGCATGAACTAGCCACAAGTACTCTCTGAAGACCCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CCA 72 bp TTTAATTTCTGCCTTCAACAGTGTTGCGATGGTTTCTaGAACTCCTGCTTGAAGGCGATCTTCTATGGCTGT +
Preference number: 6 (lower is better)
Translates to: FNFCLQQCCDGF*NSCLKAIFYGC
Trigger: ACAGCCATAGAAGATCGCCTTCAAGCAGGAGTTCCAGAAACCATCGCAACACTGTTGAAGGCAGAAATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000491840.1
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683455.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
ENST00000684551.1
CDS CAA 72 bp GATAAGCTTAGGATAGGCTGGAAGACTGACCTGACGTaGGGAATGATACACTGCCAGTGTGTTAAAATGTTG +
Preference number: 6 (lower is better)
Translates to: DKLRIGWKTDLT*GMIHCQCVKML
Trigger: CAACATTTTAACACACTGGCAGTGTATCATTCCCAACGTCAGGTCAGTCTTCCAGCCTATCCTAAGCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS CAA 72 bp CCACAGCCCAGCTTCGTTCTGCAGAACTTGATTATTTaGAACCCCAATGAACATCAAGGCGAGTTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: PQPSFVLQNLII*NPNEHQGEFSS
Trigger: AGAAGAAAACTCGCCTTGATGTTCATTGGGGTTCAAAATAATCAAGTTCTGCAGAACGAAGCTGGGCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CAA 90 bp GTAGGTGTGGGAATGGAGAGTAGTTGTTCAAAGGGGCACAGAATTTaGGTTTGGGAAGATGAAAAGAGTTATCCAAAGAGTCCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: VGVGMESSCSKGHRI*VWEDEKSYPKSPPS
Trigger: TGAAGGAGGACTCTTTGGATAACTCTTTTCATCTTCCCAAACCAAAATTCTGTGCCCCTTTGAACAACTACTCTCCATTCCCACACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491840.1
CDS TCA 72 bp TTTCCCATCACTAATCCTTCCTGCTACAATGATGGCTaGGTCTGTCACCAAAATATCACAGCCTCTGAAACA +
Preference number: 6 (lower is better)
Translates to: FPITNPSCYNDG*VCHQNITASET
Trigger: TGTTTCAGAGGCTGTGATATTTTGGTGACAGACTCAGCCATCATTGTAGCAGGAAGGATTAGTGATGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS GCA 72 bp ATCATAATTCCAGGATTAGAAAACCATCGTCTCCACTaGAGAACAGCCACACTAGTTCCTTTTGAAGCAGGT +
Preference number: 6 (lower is better)
Translates to: IIIPGLENHRLH*RTATLVPFEAG
Trigger: ACCTGCTTCAAAAGGAACTAGTGTGGCTGTTCTGCAGTGGAGACGATGGTTTTCTAATCCTGGAATTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS GCA 72 bp CCACTTGTCAACACAGTATCACATTGTACAGGCCGATaGACCAACGTTCAAATAAAATCTGCCCAGAAAATC +
Preference number: 6 (lower is better)
Translates to: PLVNTVSHCTGR*TNVQIKSAQKI
Trigger: GATTTTCTGGGCAGATTTTATTTGAACGTTGGTGCATCGGCCTGTACAATGTGATACTGTGTTGACAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684283.1
CDS CCA 72 bp ACCTTGTACTGGAGTTATTCATTTGCAAATCTGCTCTaGTTTGAATGCAGCCCGCAAAGCTCATGTGTTGAA +
Preference number: 6 (lower is better)
Translates to: TLYWSYSFANLL*FECSPQSSCVE
Trigger: TTCAACACATGAGCTTTGCGGGCTGCATTCAAACCAGAGCAGATTTGCAAATGAATAACTCCAGTACAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CCA 72 bp GATGGGGCTTATGAGAATGTCACAGATCCTCAGAAATaGGAGGGATCATTGAAATTATACATGTTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: DGAYENVTDPQK*EGSLKLYMLAS
Trigger: AGAGGCCAACATGTATAATTTCAATGATCCCTCCCATTTCTGAGGATCTGTGACATTCTCATAAGCCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CCA 72 bp TATTCCCTTCAAGGTTGCCACTGCTGTGAAGACATGTaGAACTGTTCTGGAGCTTGGCTATTTCTATACTAT +
Preference number: 6 (lower is better)
Translates to: YSLQGCHCCEDM*NCSGAWLFLYY
Trigger: ATAGTATAGAAATAGCCAAGCTCCAGAACAGTTCCACATGTCTTCACAGCAGTGGCAACCTTGAAGGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS CAA 72 bp AGTGCTTTGATTTTTACTATCAGGCTCTCATTTCGCTaGTCATTACAGGAGTTTGCCAGTGACCTAGAGGCA +
Preference number: 6 (lower is better)
Translates to: SALIFTIRLSFR*SLQEFASDLEA
Trigger: TGCCTCTAGGTCACTGGCAAACTCCTGTAATGACAAGCGAAATGAGAGCCTGATAGTAAAAATCAAAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683868.1
CDS GCA 72 bp AAAGAGTCCTCCTTCAATAGGATAAGGGCCATATTCTaGGATACCAATCGGCAGGAATACCCTATATTAATC +
Preference number: 6 (lower is better)
Translates to: KESSFNRIRAIF*DTNRQEYPILI
Trigger: GATTAATATAGGGTATTCCTGCCGATTGGTATCGCAGAATATGGCCCTTATCCTATTGAAGGAGGACTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000491840.1
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
ENST00000684551.1
CDS GCA 72 bp AAGTACCAAAGCCTGGGCTCAGGTATGGAGGATAATTaGTCAAATTTCTCTTATGCTCATCAGACATACCAT +
Preference number: 6 (lower is better)
Translates to: KYQSLGSGMEDN*SNFSYAHQTYH
Trigger: ATGGTATGTCTGATGAGCATAAGAGAAATTTGAGCAATTATCCTCCATACCTGAGCCCAGGCTTTGGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS GCA 72 bp TGGAGTTATTCATTTGCAAATCTGCTCTGGTTTGAATaGAGCCCGCAAAGCTCATGTGTTGAAAGTTTGATC +
Preference number: 6 (lower is better)
Translates to: WSYSFANLLWFE*SPQSSCVESLI
Trigger: GATCAAACTTTCAACACATGAGCTTTGCGGGCTGCATTCAAACCAGAGCAGATTTGCAAATGAATAACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS GCA 72 bp TTTTTACCTTGTACTGGAGTTATTCATTTGCAAATCTaGTCTGGTTTGAATGCAGCCCGCAAAGCTCATGTG +
Preference number: 6 (lower is better)
Translates to: FLPCTGVIHLQI*SGLNAARKAHV
Trigger: CACATGAGCTTTGCGGGCTGCATTCAAACCAGAGCAGATTTGCAAATGAATAACTCCAGTACAAGGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CCA 72 bp CTTCACAACCAATTGTCAACAGTGCTAATCCCTAGTTaGGGGGATTGTGAATGCCATTTTCTTTCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: LHNQLSTVLIPS*GDCECHFLSSC
Trigger: ACAAGAAGAAAGAAAATGGCATTCACAATCCCCCCAACTAGGGATTAGCACTGTTGACAATTGGTTGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS CCA 72 bp AGACTCTTCTTAAGTACCAAAGCCTGGGCTCAGGTATaGAGGATAATTGCTCAAATTTCTCTTATGCTCATC +
Preference number: 6 (lower is better)
Translates to: RLFLSTKAWAQV*RIIAQISLMLI
Trigger: GATGAGCATAAGAGAAATTTGAGCAATTATCCTCCATACCTGAGCCCAGGCTTTGGTACTTAAGAAGAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 72 bp GTATTCTCAACATGTTATCCACGTCTATTCACTCAGTaGCTCATAGCTGACAAGCAGAAGAGCTTCCTGTAT +
Preference number: 6 (lower is better)
Translates to: VFSTCYPRLFTQ*LIADKQKSFLY
Trigger: ATACAGGAAGCTCTTCTGCTTGTCAGCTATGAGCAACTGAGTGAATAGACGTGGATAACATGTTGAGAATAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS CAA 72 bp TGTACTGGAGTTATTCATTTGCAAATCTGCTCTGGTTaGAATGCAGCCCGCAAAGCTCATGTGTTGAAAGTT +
Preference number: 6 (lower is better)
Translates to: CTGVIHLQICSG*NAARKAHVLKV
Trigger: AACTTTCAACACATGAGCTTTGCGGGCTGCATTCAAACCAGAGCAGATTTGCAAATGAATAACTCCAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 90 bp CCTTGGCAAGTATTCTCAACATGTTATCCACGTCTATTCACTCAGTaGCTCATAGCTGACAAGCAGAAGAGCTTCCTGTATTTTCAATCT +
Preference number: 6 (lower is better)
Translates to: PWQVFSTCYPRLFTQ*LIADKQKSFLYFQS
Trigger: AGATTGAAAATACAGGAAGCTCTTCTGCTTGTCAGCTATGAGCAACTGAGTGAATAGACGTGGATAACATGTTGAGAATACTTGCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS TCA 72 bp TTTTATATCAATATTGACCTAAATGTTTCCATTCACTaGAGAAGTAGCGGGAATGTGGACCACCAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: FYINIDLNVSIH*RSSGNVDHQLD
Trigger: GTCCAGCTGGTGGTCCACATTCCCGCTACTTCTTCAGTGAATGGAAACATTTAGGTCAATATTGATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS GCA 72 bp TGTCCTGATTTCCCCACTTTGCTTGATTCTTCCTTCTaGTGGATTTCATGGCTAAACTTAAATATTACCTCC +
Preference number: 6 (lower is better)
Translates to: CPDFPTLLDSSF*WISWLNLNITS
Trigger: GGAGGTAATATTTAAGTTTAGCCATGAAATCCAGCAGAAGGAAGAATCAAGCAAAGTGGGGAAATCAGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 90 bp CCACAGTGTGACCTCGTATCACCCTGTTTCATTTGGCAAGCAGTATaGTCAAAAATGACATGCACTGATGAAGTAATCATTCATGAAAAA +
Preference number: 6 (lower is better)
Translates to: PQCDLVSPCFIWQAV*SKMTCTDEVIIHEK
Trigger: TTTTTCATGAATGATTACTTCATCAGTGCATGTCATTTTTGACAATACTGCTTGCCAAATGAAACAGGGTGATACGAGGTCACACTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS TCA 72 bp ATGTTATCCACGTCTATTCACTCAGTTGCTCATAGCTaGCAAGCAGAAGAGCTTCCTGTATTTTCAATCTTA +
Preference number: 6 (lower is better)
Translates to: MLSTSIHSVAHS*QAEELPVFSIL
Trigger: TAAGATTGAAAATACAGGAAGCTCTTCTGCTTGTCAGCTATGAGCAACTGAGTGAATAGACGTGGATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS TCA 72 bp TTACTTTGGTCTTTAATGATTGGTGTGTCCAAGTGGTaGAAGGACGCCACTATGAATACTTGCTTAGTAAGA +
Preference number: 6 (lower is better)
Translates to: LLWSLMIGVSKW*KDATMNTCLVR
Trigger: TCTTACTAAGCAAGTATTCATAGTGGCGTCCTTTCACCACTTGGACACACCAATCATTAAAGACCAAAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS CCA 72 bp TATTTGTGCAAGTGTACAATTGGATCCCTACCAATATaGAGGCCAACTAAAACACAATTGGTGGTACAATTC +
Preference number: 6 (lower is better)
Translates to: YLCKCTIGSLPI*RPTKTQLVVQF
Trigger: GAATTGTACCACCAATTGTGTTTTAGTTGGCCTCCATATTGGTAGGGATCCAATTGTACACTTGCACAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS CAA 72 bp TTCCATACTACAAACTCTTTGAAGGTGAGACCGACATaGATATATCTACTGTCACCCTTAGAATCTACCACA +
Preference number: 6 (lower is better)
Translates to: FHTTNSLKVRPT*IYLLSPLESTT
Trigger: TGTGGTAGATTCTAAGGGTGACAGTAGATATATCAATGTCGGTCTCACCTTCAAAGAGTTTGTAGTATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 72 bp CAATCGGCAGGAATACCCTATATTAATCGCAGTTTCTaGTTTGTCTCCTGTCAACACCCATATTTTAATTTC +
Preference number: 6 (lower is better)
Translates to: QSAGIPYINRSF*FVSCQHPYFNF
Trigger: GAAATTAAAATATGGGTGTTGACAGGAGACAAACAAGAAACTGCGATTAATATAGGGTATTCCTGCCGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000281620.11
ENST00000381655.7
ENST00000491840.1
ENST00000682472.1
ENST00000682942.1
ENST00000682943.1
ENST00000683303.1
ENST00000683845.1
ENST00000683945.1
ENST00000683960.1
ENST00000684025.1
ENST00000684283.1
ENST00000684424.1
ENST00000684551.1
CDS CAA 72 bp TCATCTTACTTTCTGAGTCTAAGGCTACAAGCCCTTTaGCAAGTTTCTATGTTGCTTATCCTTGAATCCATT +
Preference number: 6 (lower is better)
Translates to: SSYFLSLRLQAL*QVSMLLILESI
Trigger: AATGGATTCAAGGATAAGCAACATAGAAACTTGCAAAAGGGCTTGTAGCCTTAGACTCAGAAAGTAAGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684025.1
CDS CAA 72 bp CTTCACTTTACACAGTTTCACTCAATAGATTATTGTTaGCAACACAACTCAAAGAAAACCCCTATGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LHFTQFHSIDYC*QHNSKKTPMLK
Trigger: CTTCAGCATAGGGGTTTTCTTTGAGTTGTGTTGCAAACAATAATCTATTGAGTGAAACTGTGTAAAGTGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683461.1
CDS CAA 72 bp AGGAAGTTGTCAACAAGCTATATTAATCGCAGTTTCTaGTTTGTCTCCTGTCAACACCCATATTTTAATTTC +
Preference number: 6 (lower is better)
Translates to: RKLSTSYINRSF*FVSCQHPYFNF
Trigger: GAAATTAAAATATGGGTGTTGACAGGAGACAAACAAGAAACTGCGATTAATATAGCTTGTTGACAACTTCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683455.1