RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP8A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124406

Ensembl transcript IDs: ENST00000264449.14, ENST00000381668.9, ENST00000504024.1, ENST00000504510.5, ENST00000506602.5, ENST00000510289.1, ENST00000511858.1, ENST00000514372.5, ENST00000515872.1

Found 706 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGTTGCGCCCTCTCGGTCAGGCTTTTTCCAAGTACAACTGCTCCTaGGTCTTGAGATTTTGCCTCCAGCTCCTGAACTTCATCGACCAA +
Preference number: 1 (lower is better)
Translates to: QLRPLGQAFSKYNCS*VLRFCLQLLNFIDQ
Trigger: TTGGTCGATGAAGTTCAGGAGCTGGAGGCAAAATCTCAAGACCCAGGAGCAGTTGTACTTGGAAAAAGCCTGACCGAGAGGGCGCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CCA 90 bp CAGCGAGATGAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTaGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTT +
Preference number: 1 (lower is better)
Translates to: QRDELRSTFPLHGPD*NWLADCGDNLVALL
Trigger: AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTCATCTCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR GCA 90 bp TCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACTaGGGTGACAACCTGGTAGCTCTCCTTAGAGAGGTAACAGAGCCT +
Preference number: 1 (lower is better)
Translates to: STFPLHGPDWNWLAD*GDNLVALLREVTEP
Trigger: AGGCTCTGTTACCTCTCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR CCA 90 bp GATGAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTaGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAGAG +
Preference number: 1 (lower is better)
Translates to: DELRSTFPLHGPDWN*LADCGDNLVALLRE
Trigger: CTCTCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR CCA 90 bp TGGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTACAAGTTCACGTaGTTCTTCTTAAAGACGTTCTTGAGCAGTTGCGCCCTCTCGGTC +
Preference number: 1 (lower is better)
Translates to: WSRFCCKDSERYKFT*FFLKTFLSSCALSV
Trigger: GACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATCCTTGCAACAAAATCTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CCA 90 bp GCCTTTCAGGCTCTCCCCATCACCATTCGTCGGGCCTCTGTTTCGTaGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCAT +
Preference number: 1 (lower is better)
Translates to: AFQALPITIRRASVS*YHMLLSLQTVKRFH
Trigger: ATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGAGGCCCGACGAATGGTGATGGGGAGAGCCTGAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR GCA 90 bp CTTCAAATATTTGAACTGAGCTATGGAGTAGTCAGAGGAATTAGCTaGCTGCAGGCCTTCATTGCCACTGATACCAACACCAACGTGCGC +
Preference number: 1 (lower is better)
Translates to: LQIFELSYGVVRGIS*LQAFIATDTNTNVR
Trigger: GCGCACGTTGGTGTTGGTATCAGTGGCAATGAAGGCCTGCAGGCAGCTAATTCCTCTGACTACTCCATAGCTCAGTTCAAATATTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR TCA 90 bp TTTGACCTCAGCTATCACCACTGGGAAGCCCAGGAAAAGCTGCTCTaGATATTCATTCACTGGACAGGTAAAGACTGGGACTTCAGAATT +
Preference number: 1 (lower is better)
Translates to: FDLSYHHWEAQEKLL*IFIHWTGKDWDFRI
Trigger: AATTCTGAAGTCCCAGTCTTTACCTGTCCAGTGAATGAATATTCAGAGCAGCTTTTCCTGGGCTTCCCAGTGGTGATAGCTGAGGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR CCA 90 bp CTCTGCCACTGGAGAAACACTTTATTGGTATTGAAGGTGTTTATGTaGTCCCAGAAGCCGCATAAGTGGCCAGTGCTTACACAGATACTT +
Preference number: 1 (lower is better)
Translates to: LCHWRNTLLVLKVFM*SQKPHKWPVLTQIL
Trigger: AAGTATCTGTGTAAGCACTGGCCACTTATGCGGCTTCTGGGACCACATAAACACCTTCAATACCAATAAAGTGTTTCTCCAGTGGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR TCA 90 bp ATCTTAGACTCTTACACCTGTGGTCTTGCTAGATGTGTTGATTCATaGCTCTCTCAATCTGTACCCCAAACAGGAAGGGCTTGGGAAGTA +
Preference number: 1 (lower is better)
Translates to: ILDSYTCGLARCVDS*LSQSVPQTGRAWEV
Trigger: TACTTCCCAAGCCCTTCCTGTTTGGGGTACAGATTGAGAGAGTCATGAATCAACACATCTAGCAAGACCACAGGTGTAAGAGTCTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR TCA 90 bp TCAAATCTAGTTAACTCTGCCACTGGAGAAACACTTTATTGGTATTaGAGGTGTTTATGTGGTCCCAGAAGCCGCATAAGTGGCCAGTGC +
Preference number: 1 (lower is better)
Translates to: SNLVNSATGETLYWY*RCLCGPRSRISGQC
Trigger: GCACTGGCCACTTATGCGGCTTCTGGGACCACATAAACACCTTCAATACCAATAAAGTGTTTCTCCAGTGGCAGAGTTAACTAGATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR TCA 90 bp GGGCCTCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTaGAACGATTCCATTTTCATCTTGAGAGAACGCATACCCATGGAG +
Preference number: 1 (lower is better)
Translates to: GPLFRGIICSYHFRL*NDSIFILRERIPME
Trigger: CTCCATGGGTATGCGTTCTCTCAAGATGAAAATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CCA 90 bp CTTTCTGCTCCTCGCTATTTCCAGATTCTTATGAATATTTCTCTATaGGAGAGAAGATGGGGAAACAGCCTATTCACACTGCCAACAGGG +
Preference number: 1 (lower is better)
Translates to: LSAPRYFQILMNISL*ERRWGNSLFTLPTG
Trigger: CCCTGTTGGCAGTGTGAATAGGCTGTTTCCCCATCTTCTCTCCCATAGAGAAATATTCATAAGAATCTGGAAATAGCGAGGAGCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR GCA 90 bp GAAATCAGCAATTTGAGCAATTTGACCAGACACTGTAAACAGAGATaGCTTTCCTGGATAATTTCAGGGAGATCTCTGGGGTTCTGTTTG +
Preference number: 1 (lower is better)
Translates to: EISNLSNLTRHCKQR*LSWIISGRSLGFCL
Trigger: CAAACAGAACCCCAGAGATCTCCCTGAAATTATCCAGGAAAGGCATCTCTGTTTACAGTGTCTGGTCAAATTGCTCAAATTGCTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR CCA 90 bp CGCTATTTCCAGATTCTTATGAATATTTCTCTATGGGAGAGAAGATaGGGAAACAGCCTATTCACACTGCCAACAGGGAGCTCTCAAATA +
Preference number: 1 (lower is better)
Translates to: RYFQILMNISLWERR*GNSLFTLPTGSSQI
Trigger: TATTTGAGAGCTCCCTGTTGGCAGTGTGAATAGGCTGTTTCCCCATCTTCTCTCCCATAGAGAAATATTCATAAGAATCTGGAAATAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR TCA 90 bp GATGGGTGCTTATTCTTTCTGCTCCTCGCTATTTCCAGATTCTTATaGATATTTCTCTATGGGAGAGAAGATGGGGAAACAGCCTATTCA +
Preference number: 1 (lower is better)
Translates to: DGCLFFLLLAISRFL*IFLYGREDGETAYS
Trigger: TGAATAGGCTGTTTCCCCATCTTCTCTCCCATAGAGAAATATTCATAAGAATCTGGAAATAGCGAGGAGCAGAAAGAATAAGCACCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR GCA 90 bp TCAATATCTATGCAGCATCGGCAGAGGATGGGTGCTTATTCTTTCTaGTCCTCGCTATTTCCAGATTCTTATGAATATTTCTCTATGGGA +
Preference number: 1 (lower is better)
Translates to: SISMQHRQRMGAYSF*SSLFPDSYEYFSMG
Trigger: TCCCATAGAGAAATATTCATAAGAATCTGGAAATAGCGAGGAGCAGAAAGAATAAGCACCCATCCTCTGCCGATGCTGCATAGATATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR CCA 90 bp TCCATCAAGCCTTATGTTTCCAACAAAATCGTAGAGATGTCTGTTTaGACTTTCACACTCAATTCTGCCAGAAATCCTCATCAAACTGTC +
Preference number: 1 (lower is better)
Translates to: SIKPYVSNKIVEMSV*TFTLNSARNPHQTV
Trigger: GACAGTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAAGTCCAAACAGACATCTCTACGATTTTGTTGGAAACATAAGGCTTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504024.1
3UTR CCA 90 bp AATTTGAGCAATTTGACCAGACACTGTAAACAGAGATGCCTTTCCTaGATAATTTCAGGGAGATCTCTGGGGTTCTGTTTGAATTTTCTT +
Preference number: 1 (lower is better)
Translates to: NLSNLTRHCKQRCLS*IISGRSLGFCLNFL
Trigger: AAGAAAATTCAAACAGAACCCCAGAGATCTCCCTGAAATTATCCAGGAAAGGCATCTCTGTTTACAGTGTCTGGTCAAATTGCTCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR CCA 90 bp AATGGCATAAGAATACTGACTTATTCTCCGTTTAAGAAAGCCCTCTaGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTA +
Preference number: 1 (lower is better)
Translates to: NGIRILTYSPFKKAL*QDTRSFSISVYKDL
Trigger: TAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCTTTCTTAAACGGAGAATAAGTCAGTATTCTTATGCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAATTGGTTAGCAGACTaGGGTGACAACCTGGTAGCT +
Preference number: 2 (lower is better)
Translates to: GPDWNWLADCGDNLVALLNWLAD*GDNLVA
Trigger: AGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGAGGAATTAGCTGCCTaGAGGCCTTCATTGCCACTG +
Preference number: 2 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGEELAA*RPSLPL
Trigger: CAGTGGCAATGAAGGCCTGCAGGCAGCTAATTCCTC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CAA 90 bp CGCCCTCTCGGTCAGGCTTTTTCCAAGTACAACTGCTCCTGGGTCTaGAGATTTTGCCTCCAGCTCCTGAACTTCATCGACCAATGTTTT +
Preference number: 2 (lower is better)
Translates to: RPLGQAFSKYNCSWV*RFCLQLLNFIDQCF
Trigger: AAAACATTGGTCGATGAAGTTCAGGAGCTGGAGGCAAAATCTCAAGACCCAGGAGCAGTTGTACTTGGAAAAAGCCTGACCGAGAGGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp CGGGCCTCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGAACGTTCTTGAGCAGTTaGGCCCTCTCGGTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: RASVSWYHMLLSLQTVKRTFLSS*ALSVRL
Trigger: AAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGT...TCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGAGGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR TCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAATGCAGTACCATACTaGAGGGCTTTTAGTGGAAAC +
Preference number: 2 (lower is better)
Translates to: GPDWNWLADCGDNLVALLNAVPY*RAFSGN
Trigger: GTTTCCACTAAAAGCCCTTCAGTATGGTACTGCATT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR TCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGGAACCATGTCCAATATaGTGTCTCCAATCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: GSHHNTGCATQDTGISSGEPCPI*CLQSSF
Trigger: AAAGCTGGATTGGAGACATCATATTGGACATGGTTC...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp ACATCAAGGAGCAGAGATGCCACAGGGATGAATAACAAGCCCATCCAAAAGACTGTCAGAGGAATTAGCTaGCTGCAGGCCTTCATTGCC +
Preference number: 2 (lower is better)
Translates to: TSRSRDATGMNNKPIQKTVRGIS*LQAFIA
Trigger: GGCAATGAAGGCCTGCAGGCAGCTAATTCCTCTGAC...AGTCTTTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTCTGCTCCTTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CAA 90 bp GATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTaGAGCAGTTGCGCCCTCTCGGTCAGGCTTTTTCCAAGTACAACT +
Preference number: 2 (lower is better)
Translates to: DSERYKFTWFFLKTF*SSCALSVRLFPSTT
Trigger: AGTTGTACTTGGAAAAAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR TCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCGTTAGCAGACTGCGGTaGCAACCTGGTAGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSVSRLR*QPGSSP
Trigger: AGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAAC...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTGTTAGCAGACTGCGGTaGCAACCTGGTAGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFVSRLR*QPGSSP
Trigger: AGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAAC...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTGTTTCAGCATATCCTaGAATCTAAGTCTGGATACC +
Preference number: 2 (lower is better)
Translates to: GSHHNTGCATQDTGISSGCFSIS*NLSLDT
Trigger: GGTATCCAGACTTAGATTTCAGGATATGCTGAAACA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp CTTGAGAGAACGCATACCCATGGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTAATTGGTTAGCAGACTaGGGTGACAACCTGGTAGCT +
Preference number: 2 (lower is better)
Translates to: LERTHTHGADFVARIQSGNWLAD*GDNLVA
Trigger: AGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATT...ACCGCTCTGAATCCTTGCAACAAAATCTGCTCCATGGGTATGCGTTCTCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGTTTCTCTGGAGGGGTaGATTTCACTCTTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGVSLEG*ISLLLS
Trigger: AGAAAGCAAGAGTGAAATGCACCCCTCCAGAGAAAC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp GGTAGTGGATTCCAACACTGCTTGCAGCAGGAGCCAGAAATGTCCACCAAAACCGGTGCTTATTCTTTCTaGTCCTCGCTATTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: GSGFQHCLQQEPEMSTKTGAYSF*SSLFPD
Trigger: ATCTGGAAATAGCGAGGAGCAGAAAGAATAAGCACC...GGTTTTGGTGGACATTTCTGGCTCCTGCTGCAAGCAGTGTTGGAATCCACTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGGACCAGACTGGAATTaGTTAGCAGACTGCGGTGAC +
Preference number: 2 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHGPDWN*LADCGD
Trigger: GTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTTTAAGAAAGCCCTCTaGCAAGATACCAGGTCATTT +
Preference number: 2 (lower is better)
Translates to: GSHHNTGCATQDTGISSGFKKAL*QDTRSF
Trigger: AAATGACCTGGTATCTTGCCAGAGGGCTTTCTTAAA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTTTGCAACAGAAGCTTTaGAAATCCCACGTAAATACG +
Preference number: 2 (lower is better)
Translates to: GPDWNWLADCGDNLVALLLQQKL*KSHVNT
Trigger: CGTATTTACGTGGGATTTCCAAAGCTTCTGTTGCAA...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp GGTAGTGGATTCCAACACTGCTTGCAGCAGGAGCCAGAAATGTCCACCAAAACCCCGGCTGTTTCAAATTaGGAGAATATTGCAAAGGGT +
Preference number: 2 (lower is better)
Translates to: GSGFQHCLQQEPEMSTKTPAVSN*ENIAKG
Trigger: ACCCTTTGCAATATTCTCCCAATTTGAAACAGCCGG...GGTTTTGGTGGACATTTCTGGCTCCTGCTGCAAGCAGTGTTGGAATCCACTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGGTGTTACAGTACAGTTaGACAGTGCTTATGTCTATA +
Preference number: 2 (lower is better)
Translates to: GSHHNTGCATQDTGISSGVLQYS*TVLMSI
Trigger: TATAGACATAAGCACTGTGCAACTGTACTGTAACAC...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp CTCGAAGAAGAATCTGATCTGCTCCCAGTGGAACGGTGCCATGTCCATCAAGCCTTTCACACTCAATTCTaGCAGAAATCCTCATCAAAC +
Preference number: 2 (lower is better)
Translates to: LEEESDLLPVERCHVHQAFHTQF*QKSSSN
Trigger: GTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAA...GGCTTGATGGACATGGCACCGTTCCACTGGGAGCAGATCAGATTCTTCTTCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504024.1
3UTR-3UTR GCA 90 bp GGTAGTGGATTCCAACACTGCTTGCAGCAGGAGCCAGAAATGTCCACCAAAACCATTATTCAATATCTATaGAGCATCGGCAGAGGATGG +
Preference number: 2 (lower is better)
Translates to: GSGFQHCLQQEPEMSTKTIIQYL*SIGRGW
Trigger: CCATCCTCTGCCGATGCTGCATAGATATTGAATAAT...GGTTTTGGTGGACATTTCTGGCTCCTGCTGCAAGCAGTGTTGGAATCCACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAATCACTCTTACATTTaGAAAGTCAGGCATGCAGAT +
Preference number: 2 (lower is better)
Translates to: GPDWNWLADCGDNLVALLNHSYI*KVRHAD
Trigger: ATCTGCATGCCTGACTTTCCAAATGTAAGAGTGATT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp GGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTTGGAAAGTCAGGCATaGAGATCTTACAGCGGAACT +
Preference number: 2 (lower is better)
Translates to: GADFVARIQSGTSSRGSSLESQA*RSYSGT
Trigger: AGTTCCGCTGTAAGATCTGCATGCCTGACTTTCCAA...AGAAGAACCACGTGAACTTGTACCGCTCTGAATCCTTGCAACAAAATCTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp GGTAGTGGATTCCAACACTGCTTGCAGCAGGAGCCAGAAATGTCCACCAAAACCATGAAAACACAACAGTaGAGTGAAGTAATTCGCACA +
Preference number: 2 (lower is better)
Translates to: GSGFQHCLQQEPEMSTKTMKTQQ*SEVIRT
Trigger: TGTGCGAATTACTTCACTGCACTGTTGTGTTTTCAT...GGTTTTGGTGGACATTTCTGGCTCCTGCTGCAAGCAGTGTTGGAATCCACTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR GCA 90 bp GATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTTGCTCCATCACCGATTaGAAGCGTTACGACTTTGAC +
Preference number: 2 (lower is better)
Translates to: DSERYKFTWFFLKTFLSSCSITD*KRYDFD
Trigger: GTCAAAGTCGTAACGCTTGCAATCGGTGATGGAGCA...ACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGAAAATCCAAAAGAGATaGTGTTACAGTACAGTTGCA +
Preference number: 2 (lower is better)
Translates to: GSHHNTGCATQDTGISSGKIQKR*CYSTVA
Trigger: TGCAACTGTACTGTAACACCATCTCTTTTGGATTTT...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGCAAACAGGAAGGGCTTaGGAAGTAAAGTATGTAAAC +
Preference number: 2 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGQTGRA*EVKYVN
Trigger: GTTTACATACTTTACTTCCCAAGCCCTTCCTGTTTG...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp TTATTGGTATTGAAGGTGTTTATGTGGTCCCAGAAGCCGCATAAGTGGCCAGTGCTATGGGAGAGAAGATaGGGAAACAGCCTATTCACA +
Preference number: 2 (lower is better)
Translates to: LLVLKVFMWSQKPHKWPVLWERR*GNSLFT
Trigger: TGTGAATAGGCTGTTTCCCCATCTTCTCTCCCATAG...CACTGGCCACTTATGCGGCTTCTGGGACCACATAAACACCTTCAATACCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CCA 90 bp CAGGAGCCAGAAATGTCCACCAAAACCAGCTTATCTCTCGGCATTTACATAAACCAGAAGCCGCATAAGTaGCCAGTGCTTACACAGATA +
Preference number: 2 (lower is better)
Translates to: QEPEMSTKTSLSLGIYINQKPHK*PVLTQI
Trigger: TATCTGTGTAAGCACTGGCCACTTATGCGGCTTCTG...GTTTATGTAAATGCCGAGAGATAAGCTGGTTTTGGTGGACATTTCTGGCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR CAA 90 bp AGATGCCTTTCCTGGATAATTTCAGGGAGATCTCTGGGGTTCTGTTaGAATTTTCTTCACTGCCACTCCAGGAACATGGCTAGAAATCCA +
Preference number: 2 (lower is better)
Translates to: RCLSWIISGRSLGFC*NFLHCHSRNMARNP
Trigger: TGGATTTCTAGCCATGTTCCTGGAGTGGCAGTGAAGAAAATTCAAACAGAACCCCAGAGATCTCCCTGAAATTATCCAGGAAAGGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR TCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAGTTAGCAGACTGCGGTaGCAACCTGGTAGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGVSRLR*QPGSSP
Trigger: AGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAAC...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCGTACAGCCAATAAACTaGCAGTCAGTTACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: YIKILQKGATDEVSANRSVQPIN*QSVTAP
Trigger: TGGGGCTGTAACTGACTGTCAGTTTATTGGCTGTAC...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTGTACAGCCAATAAACTaGCAGTCAGTTACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFVQPIN*QSVTAP
Trigger: TGGGGCTGTAACTGACTGTCAGTTTATTGGCTGTAC...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACGGCCTTCATTGCCACTaGTACCAACACCAACGTGCG +
Preference number: 2 (lower is better)
Translates to: IKIYSNSHALAWITLNMNGLHCH*YQHQRA
Trigger: CGCACGTTGGTGTTGGTATCAGTGGCAATGAAGGCC...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTAATTGGTTAGCAGACTaGGGTGACAACCTGGTAGCT +
Preference number: 2 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFNWLAD*GDNLVA
Trigger: AGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGTAAGTGTTGTACAGTaGACGCAATGCAAAACAAAT +
Preference number: 2 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGVSVVQ*TQCKTN
Trigger: ATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp ATCGCTATGTGGCTGAACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAAATACCAACACCAACGTaGGCTGTCTGTATCATGCTG +
Preference number: 2 (lower is better)
Translates to: IAMWLNHVQYDVSNPAFKIPTPT*AVCIML
Trigger: CAGCATGATACAGACAGCGCACGTTGGTGTTGGTAT...TTTGAAAGCTGGATTGGAGACATCATATTGGACATGGTTCAGCCACATAGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGACCACCCAGAGTGCGATaGTCCCCCATATCGCTATGT +
Preference number: 2 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGPPRVR*SPISLC
Trigger: ACATAGCGATATGGGGGAGCATCGCACTCTGGGTGG...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAAAACACCACCCAGAGTaGGATGCTCCCCCATATCGC +
Preference number: 2 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTKHHPE*DAPPYR
Trigger: GCGATATGGGGGAGCATCGCACTCTGGGTGGTGTTT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGAGAGGTAACAGAGCCTaGCTTTCAGGCTCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: VSANRSSSSLLTELNTTKRGNRA*LSGSPH
Trigger: ATGGGGAGAGCCTGAAAGGCAGGCTCTGTTACCTCT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CCA 90 bp TCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCATGGACCAGACTGGAATTaGTTAGCAGACTGCGGTGAC +
Preference number: 2 (lower is better)
Translates to: SVSWYHMLLSLQTVKRFHGPDWN*LADCGD
Trigger: GTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC...ATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTCTTCATGGACCAGACTaGAATTGGTTAGCAGACTGC +
Preference number: 2 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFLHGPD*NWLADC
Trigger: GCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAG...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp CTTGAGAGAACGCATACCCATGGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTTTTAAGAAAGCCCTCTaGCAAGATACCAGGTCATTT +
Preference number: 2 (lower is better)
Translates to: LERTHTHGADFVARIQSGFKKAL*QDTRSF
Trigger: AAATGACCTGGTATCTTGCCAGAGGGCTTTCTTAAA...ACCGCTCTGAATCCTTGCAACAAAATCTGCTCCATGGGTATGCGTTCTCTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTATCTCTAGTGGGAACTaGAACACAGGACAAAAGCCC +
Preference number: 2 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFISSGN*NTGQKP
Trigger: GGGCTTTTGTCCTGTGTTCCAGTTCCCACTAGAGAT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTTGGAAAGTCAGGCATaGAGATCTTACAGCGGAACT +
Preference number: 2 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSLESQA*RSYSGT
Trigger: AGTTCCGCTGTAAGATCTGCATGCCTGACTTTCCAA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp ATCTGCTCCCAGTGGAACGGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAGTAGAGATGTCTGTTTaGACTTTCACACTCAATTCT +
Preference number: 2 (lower is better)
Translates to: ICSQWNGAMSIKPYVSNKVEMSV*TFTLNS
Trigger: AGAATTGAGTGTGAAAGTCCAAACAGACATCTCTAC...TTTGTTGGAAACATAAGGCTTGATGGACATGGCACCGTTCCACTGGGAGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504024.1
3UTR-3UTR CCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCCCCCATATCGCTATGTaGCTGAACCATGTCCAATAT +
Preference number: 2 (lower is better)
Translates to: YIKILQKGATDEVSANRSPHIAM*LNHVQY
Trigger: ATATTGGACATGGTTCAGCCACATAGCGATATGGGG...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTGAGAACGCATACCCATaGAGCAGATTTTGTTGCAAG +
Preference number: 2 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFENAYP*SRFCCK
Trigger: CTTGCAACAAAATCTGCTCCATGGGTATGCGTTCTC...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR TCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACTGTCCATCAGCGAGATaGGCTCAGATCTACCTTTCC +
Preference number: 2 (lower is better)
Translates to: IKIYSNSHALAWITLNMNCPSAR*AQIYLS
Trigger: GGAAAGGTAGATCTGAGCTCATCTCGCTGATGGACA...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATGTCCATCAGCGAGATaGGCTCAGATCTACCTTTCC +
Preference number: 2 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGCPSAR*AQIYLS
Trigger: GGAAAGGTAGATCTGAGCTCATCTCGCTGATGGACA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTGTTTCAGCATATCCTaGAATCTAAGTCTGGATACC +
Preference number: 2 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHCFSIS*NLSLDT
Trigger: GGTATCCAGACTTAGATTTCAGGATATGCTGAAACA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTTTTTGCTCAGGAAGGTaGGTCAGTTCCTTAAGAATG +
Preference number: 2 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFFCSGR*VSSLRM
Trigger: CATTCTTAAGGAACTGACTCACCTTCCTGAGCAAAA...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
42% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp TGGAACGGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAATCGTAGAGATGAACTGTCAACGTCTTTaGTATCTGATGTTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: WNGAMSIKPYVSNKIVEMNCQRL*YLMLLV
Trigger: TACCAGCAACATCAGATATCAAAGACGTTGACAGTT...CATCTCTACGATTTTGTTGGAAACATAAGGCTTGATGGACATGGCACCGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504024.1
3UTR-3UTR TCA 90 bp TCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCATAAAAGACTCCAGAACTaGACAACATGGCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: SVSWYHMLLSLQTVKRFHKRLQN*TTWLPL
Trigger: GAGAGGCAGCCATGTTGTTCAGTTCTGGAGTCTTTT...ATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACGTTTTCTGTAGTAGCTaGCTTCCAAGGCTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: IKIYSNSHALAWITLNMNVFCSS*LPRLPC
Trigger: ACAGGGCAGCCTTGGAAGGCAGCTACTACAGAAAAC...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTTTCCCATTTCCAAATaGAGTACCATACTGAAGGGC +
Preference number: 2 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSFPISK*STILKG
Trigger: GCCCTTCAGTATGGTACTGCATTTGGAAATGGGAAA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGCTTCATGGACCAGACTaGAATTGGTTAGCAGACTGC +
Preference number: 2 (lower is better)
Translates to: VSANRSSSSLLTELNTTKLHGPD*NWLADC
Trigger: GCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAG...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTACCTTTCCTCTTCATaGACCAGACTGGAATTGGTT +
Preference number: 2 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSYLSSS*TRLELV
Trigger: AACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTTGCAACAGAAGCTTTaGAAATCCCACGTAAATACG +
Preference number: 2 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHLQQKL*KSHVNT
Trigger: CGTATTTACGTGGGATTTCCAAAGCTTCTGTTGCAA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAATCTCTAGTGGGAACTaGAACACAGGACAAAAGCCC +
Preference number: 2 (lower is better)
Translates to: KAKGATSPILVANALKYSISSGN*NTGQKP
Trigger: GGGCTTTTGTCCTGTGTTCCAGTTCCCACTAGAGAT...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp ACATCAAGGAGCAGAGATGCCACAGGGATGAATAACAAGCCCATCCAAAAGACTAGTATAAGATGCACTTaGAGACTCTGTTATAGTTCC +
Preference number: 2 (lower is better)
Translates to: TSRSRDATGMNNKPIQKTSIRCT*RLCYSS
Trigger: GGAACTATAACAGAGTCTCCAAGTGCATCTTATACT...AGTCTTTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTCTGCTCCTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CAA 90 bp GAAATTTTGCTCAGGAAGGTGAGTCAGTTCCTTAAGAATGCTGGTTaGTTTCAGCATATCCTGAAATCTAAGTCTGGATACCAAGAGTCC +
Preference number: 2 (lower is better)
Translates to: EILLRKVSQFLKNAG*FQHILKSKSGYQES
Trigger: GGACTCTTGGTATCCAGACTTAGATTTCAGGATATGCTGAAACAAACCAGCATTCTTAAGGAACTGACTCACCTTCCTGAGCAAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGTACAGCCAATAAACTaGCAGTCAGTTACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTVQPIN*QSVTAP
Trigger: TGGGGCTGTAACTGACTGTCAGTTTATTGGCTGTAC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTGTTTCAGCATATCCTaGAATCTAAGTCTGGATACC +
Preference number: 2 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSCFSIS*NLSLDT
Trigger: GGTATCCAGACTTAGATTTCAGGATATGCTGAAACA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTGGGCATATGACTACTaGACTAGAAAAACACTTACT +
Preference number: 2 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHWAYDY*TRKTLT
Trigger: AGTAAGTGTTTTTCTAGTTCAGTAGTCATATGCCCA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGTGTTACAGTACAGTTaGACAGTGCTTATGTCTATA +
Preference number: 2 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHVLQYS*TVLMSI
Trigger: TATAGACATAAGCACTGTGCAACTGTACTGTAACAC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp AAATCCACACTAAACACACCAGATATGCCCACATCAGTAAGATATCACTACTTAACAGCCTATTCACACTaGCAACAGGGAGCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: KSTLNTPDMPTSVRYHYLTAYSH*QQGALK
Trigger: TTTGAGAGCTCCCTGTTGGCAGTGTGAATAGGCTGT...TAAGTAGTGATATCTTACTGATGTGGGCATATCTGGTGTGTTTAGTGTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CCA 90 bp GATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTAATCACTCTTACATTTaGAAAGTCAGGCATGCAGAT +
Preference number: 2 (lower is better)
Translates to: DSERYKFTWFFLKTFLSSNHSYI*KVRHAD
Trigger: ATCTGCATGCCTGACTTTCCAAATGTAAGAGTGATT...ACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGAAGTACAACTGCTCCTaGGTCTTGAGATTTTGCCTC +
Preference number: 2 (lower is better)
Translates to: VSANRSSSSLLTELNTTKKYNCS*VLRFCL
Trigger: GAGGCAAAATCTCAAGACCCAGGAGCAGTTGTACTT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR TCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGCAGGAAAAGCTGCTCTaGATATTCATTCACTGGACA +
Preference number: 2 (lower is better)
Translates to: VSANRSSSSLLTELNTTKQEKLL*IFIHWT
Trigger: TGTCCAGTGAATGAATATTCAGAGCAGCTTTTCCTG...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTATCACTTCAGACTGTaGAACGATTCCATTTTCATC +
Preference number: 2 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSYHFRL*NDSIFI
Trigger: GATGAAAATGGAATCGTTTCACAGTCTGAAGTGATA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCCAGGACAAAAGCCCATaGATTTATCTGACATGTTAT +
Preference number: 2 (lower is better)
Translates to: YIKILQKGATDEVSANRSQDKSP*IYLTCY
Trigger: ATAACATGTCAGATAAATGCATGGGCTTTTGTCCTG...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACCTATCAAAGGGCAACTaGACAAAAATAAACACGATT +
Preference number: 2 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHLSKGN*TKINTI
Trigger: AATCGTGTTTATTTTTGTGCAGTTGCCCTTTGATAG...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGACGGGCCTCTGTTTCGTaGTATCATATGCTCTTATCA +
Preference number: 2 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGRASVS*YHMLLS
Trigger: TGATAAGAGCATATGATACCACGAAACAGAGGCCCG...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CAA 90 bp TCACACTCAATTCTGCCAGAAATCCTCATCAAACTGTCAACGTCTTaGATATCTGATGTTGCTGGTAAGCCCTGTCTAATTTTCAAGTTT +
Preference number: 2 (lower is better)
Translates to: SHSILPEILIKLSTS*ISDVAGKPCLIFKF
Trigger: AAACTTGAAAATTAGACAGGGCTTACCAGCAACATCAGATATCAAAGACGTTGACAGTTTGATGAGGATTTCTGGCAGAATTGAGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504024.1
3UTR-3UTR TCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACACAGGAAAAGCTGCTCTaGATATTCATTCACTGGACA +
Preference number: 2 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTQEKLL*IFIHWT
Trigger: TGTCCAGTGAATGAATATTCAGAGCAGCTTTTCCTG...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTCATCACTCAATCTACTaGATTAGCCAGATTTTTAGA +
Preference number: 2 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFHHSIY*ISQIFR
Trigger: TCTAAAAATCTGGCTAATGCAGTAGATTGAGTGATG...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGAACTGTGTTAGCATTTaGCAGAGTCCCTATAAGGAA +
Preference number: 2 (lower is better)
Translates to: VSANRSSSSLLTELNTTKNCVSI*QSPYKE
Trigger: TTCCTTATAGGGACTCTGGCAAATGCTAACACAGTT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTAAAATCCAAAAGAGATaGTGTTACAGTACAGTTGCA +
Preference number: 2 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFKIQKR*CYSTVA
Trigger: TGCAACTGTACTGTAACACCATCTCTTTTGGATTTT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCCGGTACAAGTTCACGTaGTTCTTCTTAAAGACGTTC +
Preference number: 2 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFRYKFT*FFLKTF
Trigger: GAACGTCTTTAAGAAGAACCACGTGAACTTGTACCG...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR GCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCACAGGACAAAAGCCCATaGATTTATCTGACATGTTAT +
Preference number: 2 (lower is better)
Translates to: KAKGATSPILVANALKYSQDKSP*IYLTCY
Trigger: ATAACATGTCAGATAAATGCATGGGCTTTTGTCCTG...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACCAAACAGGAAGGGCTTaGGAAGTAAAGTATGTAAAC +
Preference number: 2 (lower is better)
Translates to: IKIYSNSHALAWITLNMNQTGRA*EVKYVN
Trigger: GTTTACATACTTTACTTCCCAAGCCCTTCCTGTTTG...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACTCAAAAACAGGACGATaGGACAAAGAGGCTCAAATT +
Preference number: 2 (lower is better)
Translates to: IKIYSNSHALAWITLNMNSKTGR*DKEAQI
Trigger: AATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGA...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp TTGGACTTTCACACTCAATTCTGCCAGAAATCCTCATCAAACTGTCAACGTCTTTTTCACCATCTAAGTTaGATGTTTCAATGTAGCACA +
Preference number: 2 (lower is better)
Translates to: LDFHTQFCQKSSSNCQRLFHHLS*MFQCST
Trigger: TGTGCTACATTGAAACATCCAACTTAGATGGTGAAA...AAGACGTTGACAGTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAAGTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504024.1
3UTR-3UTR TCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATGGGCATATGACTACTaGACTAGAAAAACACTTACT +
Preference number: 2 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGWAYDY*TRKTLT
Trigger: AGTAAGTGTTTTTCTAGTTCAGTAGTCATATGCCCA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACACAATCTATTACTTTCTaGCTAGCATTCATTTCCCGA +
Preference number: 2 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTQSITF*LAFISR
Trigger: TCGGGAAATGAATGCTAGTCAGAAAGTAATAGATTG...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACCAATCTATTACTTTCTaGCTAGCATTCATTTCCCGA +
Preference number: 2 (lower is better)
Translates to: IKIYSNSHALAWITLNMNQSITF*LAFISR
Trigger: TCGGGAAATGAATGCTAGTCAGAAAGTAATAGATTG...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR TCA 90 bp GTTTATCAAATAGAAAGGAGATTAAAGCAGACACATGCCACATTACCCAAATTGACACTTTATTGGTATTaGAGGTGTTTATGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: VYQIERRLKQTHATLPKLTLYWY*RCLCGP
Trigger: GGGACCACATAAACACCTTCAATACCAATAAAGTGT...CAATTTGGGTAATGTGGCATGTGTCTGCTTTAATCTCCTTTCTATTTGATAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR GCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACACAGGACAAAAGCCCATaGATTTATCTGACATGTTAT +
Preference number: 2 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTQDKSP*IYLTCY
Trigger: ATAACATGTCAGATAAATGCATGGGCTTTTGTCCTG...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGCATTTAGAAAGTCCATaGTCAATACCACTGTATACT +
Preference number: 2 (lower is better)
Translates to: VSANRSSSSLLTELNTTKHLESP*SIPLYT
Trigger: AGTATACAGTGGTATTGAGCATGGACTTTCTAAATG...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp GTTTATCAAATAGAAAGGAGATTAAAGCAGACACATGCCACATTACCCAAATTGAGAAGGAATTCTTGGTaGAGAATTGCAAAGACCTCT +
Preference number: 2 (lower is better)
Translates to: VYQIERRLKQTHATLPKLRRNSW*RIAKTS
Trigger: AGAGGTCTTTGCAATTCTGCACCAAGAATTCCTTCT...CAATTTGGGTAATGTGGCATGTGTCTGCTTTAATCTCCTTTCTATTTGATAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAAAAATCCAAAAGAGATaGTGTTACAGTACAGTTGCA +
Preference number: 2 (lower is better)
Translates to: KAKGATSPILVANALKYSKIQKR*CYSTVA
Trigger: TGCAACTGTACTGTAACACCATCTCTTTTGGATTTT...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCAATCACTCTTACATTTaGAAAGTCAGGCATGCAGAT +
Preference number: 2 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFNHSYI*KVRHAD
Trigger: ATCTGCATGCCTGACTTTCCAAATGTAAGAGTGATT...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACACATCACTCAATCTACTaGATTAGCCAGATTTTTAGA +
Preference number: 2 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTHHSIY*ISQIFR
Trigger: TCTAAAAATCTGGCTAATGCAGTAGATTGAGTGATG...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR GCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACTTTATATTAAAATTCTaGAGAAGGGTGCCACTGATG +
Preference number: 2 (lower is better)
Translates to: IKIYSNSHALAWITLNMNFILKF*RRVPLM
Trigger: CATCAGTGGCACCCTTCTGCAGAATTTTAATATAAA...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAAACAGAATAACTGAGTaGAAGAGGCCATTTAAACAA +
Preference number: 2 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTNRITE*KRPFKQ
Trigger: TTGTTTAAATGGCCTCTTCCACTCAGTTATTCTGTT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR GCA 72 bp CCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACTaGGGTGACAACCTGGTAGCTCTCCTTAGAGAGGTA +
Preference number: 3 (lower is better)
Translates to: PLHGPDWNWLAD*GDNLVALLREV
Trigger: TACCTCTCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR CCA 72 bp CCTCTCGGTCAGGCTTTTTCCAAGTACAACTGCTCCTaGGTCTTGAGATTTTGCCTCCAGCTCCTGAACTTC +
Preference number: 3 (lower is better)
Translates to: PLGQAFSKYNCS*VLRFCLQLLNF
Trigger: GAAGTTCAGGAGCTGGAGGCAAAATCTCAAGACCCAGGAGCAGTTGTACTTGGAAAAAGCCTGACCGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CCA 72 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTaGAATTGGTTAGCAGACTGCGGTGACAACCTGGTA +
Preference number: 3 (lower is better)
Translates to: ELRSTFPLHGPD*NWLADCGDNLV
Trigger: TACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTGCTTGTTTAGAAATTTaGCTCAGGAAGGTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: GPDWNWLADCGDNLVALLACLEI*LRKVSQ
Trigger: CTGACTCACCTTCCTGAGCAAAATTTCTAAACAAGC...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR GCA 72 bp TTTGAACTGAGCTATGGAGTAGTCAGAGGAATTAGCTaGCTGCAGGCCTTCATTGCCACTGATACCAACACC +
Preference number: 3 (lower is better)
Translates to: FELSYGVVRGIS*LQAFIATDTNT
Trigger: GGTGTTGGTATCAGTGGCAATGAAGGCCTGCAGGCAGCTAATTCCTCTGACTACTCCATAGCTCAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CCA 72 bp GCTCTCCCCATCACCATTCGTCGGGCCTCTGTTTCGTaGTATCATATGCTCTTATCACTTCAGACTGTGAAA +
Preference number: 3 (lower is better)
Translates to: ALPITIRRASVS*YHMLLSLQTVK
Trigger: TTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGAGGCCCGACGAATGGTGATGGGGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CAA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTATTGCAACAGAAGCTTaGGAAATCCCACGTAAATAC +
Preference number: 3 (lower is better)
Translates to: GPDWNWLADCGDNLVALLIATEA*EIPRKY
Trigger: GTATTTACGTGGGATTTCCAAAGCTTCTGTTGCAAT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTTAAAAGCAGTCCTCTaGATAACCTTGTACACCACA +
Preference number: 3 (lower is better)
Translates to: GSHHNTGCATQDTGISSGLKAVL*ITLYTT
Trigger: TGTGGTGTACAAGGTTATCAAGAGGACTGCTTTTAA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CAA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGCTTGTTTAGAAATTTaGCTCAGGAAGGTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGACLEI*LRKVSQ
Trigger: CTGACTCACCTTCCTGAGCAAAATTTCTAAACAAGC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp GTCCACCAAAACCAGCTTATCTCTCGGCATTTACATAAACCTCAGGGGATTGGTGCCGGCTGTTTCAAATaGGGAGAATATTGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: VHQNQLISRHLHKPQGIGAGCFK*GEYCKG
Trigger: CCCTTTGCAATATTCTCCCAATTTGAAACAGCCGGC...ACCAATCCCCTGAGGTTTATGTAAATGCCGAGAGATAAGCTGGTTTTGGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CAA 90 bp ACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAACACACAGTTATCACCAGCCTGCAGGCCTTCATaGCCACTGATACCAACACCA +
Preference number: 3 (lower is better)
Translates to: TMSNMMSPIQLSNTQLSPACRPS*PLIPTP
Trigger: TGGTGTTGGTATCAGTGGCAATGAAGGCCTGCAGGC...TGGTGATAACTGTGTGTTTGAAAGCTGGATTGGAGACATCATATTGGACATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCGACGTTCTTGAGCAGTaGCGCCCTCTCGGTCAGGCT +
Preference number: 3 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFDVLEQ*RPLGQA
Trigger: AGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTC...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR GCA 72 bp TTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTTaGGCCCTCTCGGTCAGGCTTTTTCCAAGTACAACT +
Preference number: 3 (lower is better)
Translates to: FTWFFLKTFLSS*ALSVRLFPSTT
Trigger: AGTTGTACTTGGAAAAAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CAA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGAAATCACTCTTACATTaGGAAAGTCAGGCATGCAGA +
Preference number: 3 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGKSLLH*ESQACR
Trigger: TCTGCATGCCTGACTTTCCAAATGTAAGAGTGATTT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR TCA 72 bp TCTTACACCTGTGGTCTTGCTAGATGTGTTGATTCATaGCTCTCTCAATCTGTACCCCAAACAGGAAGGGCT +
Preference number: 3 (lower is better)
Translates to: SYTCGLARCVDS*LSQSVPQTGRA
Trigger: AGCCCTTCCTGTTTGGGGTACAGATTGAGAGAGTCATGAATCAACACATCTAGCAAGACCACAGGTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR CCA 72 bp TTTTGTTGCAAGGATTCAGAGCGGTACAAGTTCACGTaGTTCTTCTTAAAGACGTTCTTGAGCAGTTGCGCC +
Preference number: 3 (lower is better)
Translates to: FCCKDSERYKFT*FFLKTFLSSCA
Trigger: GGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATCCTTGCAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CAA 90 bp CGTCCCATCCCCTTTACCACCCAAAATGAACAGTCCTTGCCACATCAAATTTATATAAACCTCAGGGGATaGGTCACGGGCTTAACATTT +
Preference number: 3 (lower is better)
Translates to: RPIPFTTQNEQSLPHQIYINLRG*VTGLTF
Trigger: AAATGTTAAGCCCGTGACCAATCCCCTGAGGTTTAT...ATAAATTTGATGTGGCAAGGACTGTTCATTTTGGGTGGTAAAGGGGATGGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTGTCCTCTTGATAACCTaGTACACCACATCAAGGAGC +
Preference number: 3 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFVLLIT*YTTSRS
Trigger: GCTCCTTGATGTGGTGTACAAGGTTATCAAGAGGAC...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CAA 90 bp GGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTAAATCACTCTTACATTaGGAAAGTCAGGCATGCAGA +
Preference number: 3 (lower is better)
Translates to: GADFVARIQSGTSSRGSSKSLLH*ESQACR
Trigger: TCTGCATGCCTGACTTTCCAAATGTAAGAGTGATTT...AGAAGAACCACGTGAACTTGTACCGCTCTGAATCCTTGCAACAAAATCTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CAA 90 bp TCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCATTTCTTAAAGACGTTCTaGAGCAGTTGCGCCCTCTCG +
Preference number: 3 (lower is better)
Translates to: SVSWYHMLLSLQTVKRFHFLKTF*SSCALS
Trigger: CGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAA...ATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR TCA 72 bp TTACATTATTGTTGGAATGAAAACACAACAGTGCAGTaGAGTAATTCGCACAGCCCTCCATTCCTCCACACC +
Preference number: 3 (lower is better)
Translates to: LHYCWNENTTVQ*SNSHSPPFLHT
Trigger: GGTGTGGAGGAATGGAGGGCTGTGCGAATTACTTCACTGCACTGTTGTGTTTTCATTCCAACAATAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR TCA 72 bp GTTAACTCTGCCACTGGAGAAACACTTTATTGGTATTaGAGGTGTTTATGTGGTCCCAGAAGCCGCATAAGT +
Preference number: 3 (lower is better)
Translates to: VNSATGETLYWY*RCLCGPRSRIS
Trigger: ACTTATGCGGCTTCTGGGACCACATAAACACCTTCAATACCAATAAAGTGTTTCTCCAGTGGCAGAGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR GCA 72 bp TTATTCAATATCTATGCAGCATCGGCAGAGGATGGGTaGTTATTCTTTCTGCTCCTCGCTATTTCCAGATTC +
Preference number: 3 (lower is better)
Translates to: LFNIYAASAEDG*LFFLLLAISRF
Trigger: GAATCTGGAAATAGCGAGGAGCAGAAAGAATAAGCACCCATCCTCTGCCGATGCTGCATAGATATTGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CAA 90 bp GTCCACCAAAACCAGCTTATCTCTCGGCATTTACATAAACCTCAGGGGATTGGTATTCTTGGTGCAGAATaGCAAAGACCTCTTCTAAAA +
Preference number: 3 (lower is better)
Translates to: VHQNQLISRHLHKPQGIGILGAE*QRPLLK
Trigger: TTTTAGAAGAGGTCTTTGCAATTCTGCACCAAGAAT...ACCAATCCCCTGAGGTTTATGTAAATGCCGAGAGATAAGCTGGTTTTGGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTGCAAGCGTTACGACTTaGACTTGTTTCTTAACCATC +
Preference number: 3 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFASVTT*TCFLTI
Trigger: GATGGTTAAGAAACAAGTCAAAGTCGTAACGCTTGC...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR TCA 72 bp ATCACTTCAGACTGTGAAACGATTCCATTTTCATCTTaGGAGAACGCATACCCATGGAGCAGATTTTGTTGC +
Preference number: 3 (lower is better)
Translates to: ITSDCETIPFSS*ENAYPWSRFCC
Trigger: GCAACAAAATCTGCTCCATGGGTATGCGTTCTCTCAAGATGAAAATGGAATCGTTTCACAGTCTGAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR CCA 72 bp TTGAAGGTGTTTATGTGGTCCCAGAAGCCGCATAAGTaGCCAGTGCTTACACAGATACTTTTTACATTATTG +
Preference number: 3 (lower is better)
Translates to: LKVFMWSQKPHK*PVLTQILFTLL
Trigger: CAATAATGTAAAAAGTATCTGTGTAAGCACTGGCCACTTATGCGGCTTCTGGGACCACATAAACACCTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR-3UTR CAA 90 bp GGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAATCGTAGAGATGTCTGTTAAACTGTCAACGTCTTaGATATCTGATGTTGCTGGT +
Preference number: 3 (lower is better)
Translates to: GAMSIKPYVSNKIVEMSVKLSTS*ISDVAG
Trigger: ACCAGCAACATCAGATATCAAAGACGTTGACAGTTT...AACAGACATCTCTACGATTTTGTTGGAAACATAAGGCTTGATGGACATGGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504024.1
3UTR-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGGGTGTTACAGTACAGTaGCACAGTGCTTATGTCTAT +
Preference number: 3 (lower is better)
Translates to: VSANRSSSSLLTELNTTKGVTVQ*HSAYVY
Trigger: ATAGACATAAGCACTGTGCAACTGTACTGTAACACC...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCCTTAAGAATGCTGGTTaGTTTCAGCATATCCTGAAA +
Preference number: 3 (lower is better)
Translates to: YIKILQKGATDEVSANRSLKNAG*FQHILK
Trigger: TTTCAGGATATGCTGAAACAAACCAGCATTCTTAAG...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp TCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCATGCTTGTTTAGAAATTTaGCTCAGGAAGGTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: SVSWYHMLLSLQTVKRFHACLEI*LRKVSQ
Trigger: CTGACTCACCTTCCTGAGCAAAATTTCTAAACAAGC...ATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGAGTGTAGAAAACTGGTaGTGGTTTTTAAACAGCCCC +
Preference number: 3 (lower is better)
Translates to: VSANRSSSSLLTELNTTKSVENW*WFLNSP
Trigger: GGGGCTGTTTAAAAACCACAACCAGTTTTCTACACT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCACCAAACAGGAAGGGCTaGGGAAGTAAAGTATGTAAA +
Preference number: 3 (lower is better)
Translates to: KAKGATSPILVANALKYSPNRKG*GSKVCK
Trigger: TTTACATACTTTACTTCCCAAGCCCTTCCTGTTTGG...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGCTTACACCTGTGGTCTaGCTAGATGTGTTGATTCAT +
Preference number: 3 (lower is better)
Translates to: VSANRSSSSLLTELNTTKLTPVV*LDVLIH
Trigger: ATGAATCAACACATCTAGCAAGACCACAGGTGTAAG...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp ACATCAGTAAGATATCACTACTTAGGTCTTAGAAACACCCAGATCTTCCTCTTGAACCAGAAGGAATTCTaGGTGCAGAATTGCAAAGAC +
Preference number: 3 (lower is better)
Translates to: TSVRYHYLGLRNTQIFLLNQKEF*VQNCKD
Trigger: GTCTTTGCAATTCTGCACCAAGAATTCCTTCTGGTT...CAAGAGGAAGATCTGGGTGTTTCTAAGACCTAAGTAGTGATATCTTACTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR TCA 72 bp TATAATATACATGAATCTGAATGTCCATCAGCGAGATaGGCTCAGATCTACCTTTCCTCTTCATGGACCAGA +
Preference number: 3 (lower is better)
Translates to: YNIHESECPSAR*AQIYLSSSWTR
Trigger: TCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTCATCTCGCTGATGGACATTCAGATTCATGTATATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCGGTGTTACAGTACAGTaGCACAGTGCTTATGTCTAT +
Preference number: 3 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFGVTVQ*HSAYVY
Trigger: ATAGACATAAGCACTGTGCAACTGTACTGTAACACC...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGGTGTTACAGTACAGTaGCACAGTGCTTATGTCTAT +
Preference number: 3 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTGVTVQ*HSAYVY
Trigger: ATAGACATAAGCACTGTGCAACTGTACTGTAACACC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGAAATCACTCTTACATTaGGAAAGTCAGGCATGCAGA +
Preference number: 3 (lower is better)
Translates to: VSANRSSSSLLTELNTTKKSLLH*ESQACR
Trigger: TCTGCATGCCTGACTTTCCAAATGTAAGAGTGATTT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAATTGCAACAGAAGCTTaGGAAATCCCACGTAAATAC +
Preference number: 3 (lower is better)
Translates to: KAKGATSPILVANALKYSIATEA*EIPRKY
Trigger: GTATTTACGTGGGATTTCCAAAGCTTCTGTTGCAAT...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGACTTACACCTGTGGTCTaGCTAGATGTGTTGATTCAT +
Preference number: 3 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGLTPVV*LDVLIH
Trigger: ATGAATCAACACATCTAGCAAGACCACAGGTGTAAG...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCGATTCCATTTTCATCTaGAGAGAACGCATACCCATG +
Preference number: 3 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFDSIFI*RERIPM
Trigger: CATGGGTATGCGTTCTCTCAAGATGAAAATGGAATC...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR TCA 72 bp ACCTTAAGTCATTTACAAAAGAATTCCTGGTCCATGTaGTGTGAATGGGCTGGGCACTTTCTCCATAAATTT +
Preference number: 3 (lower is better)
Translates to: TLSHLQKNSWSM*CEWAGHFLHKF
Trigger: AAATTTATGGAGAAAGTGCCCAGCCCATTCACATCACATGGACCAGGAATTCTTTTGTAAATGACTTAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR CCA 72 bp AGAATACTGACTTATTCTCCGTTTAAGAAAGCCCTCTaGCAAGATACCAGGTCATTTTCAATTTCCGTTTAC +
Preference number: 3 (lower is better)
Translates to: RILTYSPFKKAL*QDTRSFSISVY
Trigger: GTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCTTTCTTAAACGGAGAATAAGTCAGTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR CCA 72 bp CCTTATGTTTCCAACAAAATCGTAGAGATGTCTGTTTaGACTTTCACACTCAATTCTGCCAGAAATCCTCAT +
Preference number: 3 (lower is better)
Translates to: PYVSNKIVEMSV*TFTLNSARNPH
Trigger: ATGAGGATTTCTGGCAGAATTGAGTGTGAAAGTCCAAACAGACATCTCTACGATTTTGTTGGAAACATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504024.1
3UTR-3UTR CAA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAATTGCAACAGAAGCTTaGGAAATCCCACGTAAATAC +
Preference number: 3 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGIATEA*EIPRKY
Trigger: GTATTTACGTGGGATTTCCAAAGCTTCTGTTGCAAT...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCGTCTTGCTAGATGTGTaGATTCATGACTCTCTCAAT +
Preference number: 3 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFVLLDV*IHDSLN
Trigger: ATTGAGAGAGTCATGAATCAACACATCTAGCAAGAC...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACTGGGACTTCAGAATTTaGAAGACGATCTTAGACTCT +
Preference number: 3 (lower is better)
Translates to: IKIYSNSHALAWITLNMNWDFRI*KTILDS
Trigger: AGAGTCTAAGATCGTCTTCAAAATTCTGAAGTCCCA...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATGGGACTTCAGAATTTaGAAGACGATCTTAGACTCT +
Preference number: 3 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGWDFRI*KTILDS
Trigger: AGAGTCTAAGATCGTCTTCAAAATTCTGAAGTCCCA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATGGGACTTCAGAATTTaGAAGACGATCTTAGACTCT +
Preference number: 3 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTWDFRI*KTILDS
Trigger: AGAGTCTAAGATCGTCTTCAAAATTCTGAAGTCCCA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACACGTTACGACTTTGACTaGTTTCTTAACCATCTCAAC +
Preference number: 3 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTRYDFD*FLNHLN
Trigger: GTTGAGATGGTTAAGAAACAAGTCAAAGTCGTAACG...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR TCA 72 bp TTATTCTTTCTGCTCCTCGCTATTTCCAGATTCTTATaGATATTTCTCTATGGGAGAGAAGATGGGGAAACA +
Preference number: 3 (lower is better)
Translates to: LFFLLLAISRFL*IFLYGREDGET
Trigger: TGTTTCCCCATCTTCTCTCCCATAGAGAAATATTCATAAGAATCTGGAAATAGCGAGGAGCAGAAAGAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR TCA 72 bp TTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTaGAACGATTCCATTTTCATCTTGAGAGAACGCATA +
Preference number: 3 (lower is better)
Translates to: FRGIICSYHFRL*NDSIFILRERI
Trigger: TATGCGTTCTCTCAAGATGAAAATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
3UTR GCA 72 bp TTTTGTAAATCACTCTTACATTTGGAAAGTCAGGCATaGAGATCTTACAGCGGAACTGGAAGTAAACTTTCT +
Preference number: 3 (lower is better)
Translates to: FCKSLLHLESQA*RSYSGTGSKLS
Trigger: AGAAAGTTTACTTCCAGTTCCGCTGTAAGATCTGCATGCCTGACTTTCCAAATGTAAGAGTGATTTACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR-3UTR CAA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGACTTAAGAATGCTGGTTaGTTTCAGCATATCCTGAAA +
Preference number: 3 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGLKNAG*FQHILK
Trigger: TTTCAGGATATGCTGAAACAAACCAGCATTCTTAAG...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTACACGGTCCTCCGCATaGTGGGCATCGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLTRSSA*WASRRR
Trigger: CCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTGCACCTGTCACGGCGTaGTACACGCGGGAGACCCGG +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLAPVTA*YTRETR
Trigger: CCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTGC...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACCGGTCCTCCGCATGGTaGGCATCGCGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADRSSAW*ASRRRL
Trigger: CAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCG...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp GTACCTGAACATTTGACAAGGTTTTATGACGTGACTTTACCTGCAGCAGTGCAACGGTCCTCCGCATGGTaGGCATCGCGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VPEHLTRFYDVTLPAAVQRSSAW*ASRRRL
Trigger: CAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCG...TTGCACTGCTGCAGGTAAAGTCACGTCATAAAACCTTGTCAAATGTTCAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR TCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGGGCCTTCATTGCCACTaGTACCAACACCAACGTGCG +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGGLHCH*YQHQRA
Trigger: CGCACGTTGGTGTTGGTATCAGTGGCAATGAAGGCC...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGCCACCCAGAGTGCGATaGTCCCCCATATCGCTATGT +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGPPRVR*SPISLC
Trigger: ACATAGCGATATGGGGGAGCATCGCACTCTGGGTGG...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCCCACCCAGAGTGCGATaGTCCCCCATATCGCTATGT +
Preference number: 4 (lower is better)
Translates to: LLTYQGPSEWQATEMSRFPPRVR*SPISLC
Trigger: ACATAGCGATATGGGGGAGCATCGCACTCTGGGTGG...GAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR GCA 90 bp CTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCAAACACCACCCAGAGTaGGATGCTCCCCCATATCGC +
Preference number: 4 (lower is better)
Translates to: LLTYQGPSEWQATEMSRFKHHPE*DAPPYR
Trigger: GCGATATGGGGGAGCATCGCACTCTGGGTGGTGTTT...GAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR CCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGCACCTGTCACGGCGTaGTACACGCGGGAGACCCGG +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHAPVTA*YTRETR
Trigger: CCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTGC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp AACCCCGAAATCAGCAATTTGAGCAATTTGACCAGACACTGTAAACAGAGATGCACACGGTCCTCCGCATaGTGGGCATCGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: NPEISNLSNLTRHCKQRCTRSSA*WASRRR
Trigger: CCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGT...GCATCTCTGTTTACAGTGTCTGGTCAAATTGCTCAAATTGCTGATTTCGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR TCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTACTGCTCGCCACTCCTaGAAGTCGCTCTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLTARHS*KSLSEI
Trigger: GATTTCAGAGAGCGACTTTCAGGAGTGGCGAGCAGT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAGTTAGCAGACTGCGGTaGCAACCTGGTAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRVSRLR*QPGSSP
Trigger: AGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAAC...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCACATCGCGGCGGCGGCTaGAGGTGGGTCCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSHRGGG*RWVLSP
Trigger: CGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATG...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTTTCTCGCTCTGGCACTaGTGTGTGACAGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLFSLWH*CVTDCH
Trigger: ATGGCAGTCTGTCACACAGCAGTGCCAGAGCGAGAA...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGACCACCCAGAGTGCGATaGTCCCCCATATCGCTATGT +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRPPRVR*SPISLC
Trigger: ACATAGCGATATGGGGGAGCATCGCACTCTGGGTGG...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp AACCCCGAAATCAGCAATTTGAGCAATTTGACCAGACACTGTAAACAGAGATGCGCACCTGTCACGGCGTaGTACACGCGGGAGACCCGG +
Preference number: 4 (lower is better)
Translates to: NPEISNLSNLTRHCKQRCAPVTA*YTRETR
Trigger: CCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTGC...GCATCTCTGTTTACAGTGTCTGGTCAAATTGCTCAAATTGCTGATTTCGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGGGACCAGACTGGAATTaGTTAGCAGACTGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGGPDWN*LADCGD
Trigger: GTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CAGGAGCCAGAAATGTCCACCAAAACCAGCTTATCTCTCGGCATTTACATAAACCCTCAGCCCGGACTCTaGACCTGTCACGGCGTGGTA +
Preference number: 4 (lower is better)
Translates to: QEPEMSTKTSLSLGIYINPQPGL*TCHGVV
Trigger: TACCACGCCGTGACAGGTGCAGAGTCCGGGCTGAGG...GTTTATGTAAATGCCGAGAGATAAGCTGGTTTTGGTGGACATTTCTGGCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGACATCGCGGCGGCGGCTaGAGGTGGGTCCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGHRGGG*RWVLSP
Trigger: CGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATG...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp CTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCCAAGAGGAATTAGCTGCCTaGAGGCCTTCATTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LTYQGPSEWQATEMSRFQEELAA*RPSLPL
Trigger: CAGTGGCAATGAAGGCCTGCAGGCAGCTAATTCCTC...TTGGAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGAAACACCACCCAGAGTaGGATGCTCCCCCATATCGC +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGKHHPE*DAPPYR
Trigger: GCGATATGGGGGAGCATCGCACTCTGGGTGGTGTTT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAACACGGTCCTCCGCATaGTGGGCATCGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSTRSSA*WASRRR
Trigger: CCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGT...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAGGACCAGACTGGAATTaGTTAGCAGACTGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRGPDWN*LADCGD
Trigger: GTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGCTGAAAGTCGCTCTCTaGAATCTCAGCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGLKVAL*NLSHSK
Trigger: TTTGCTGTGGCTGAGATTTCAGAGAGCGACTTTCAG...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp CTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCAGAAAACCTTGGTGTTaGAGTCCAGGGCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLTYQGPSEWQATEMSRFRKPWC*SPGHSE
Trigger: CTCAGAATGCCCTGGACTTCAACACCAAGGTTTTCT...GAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp GATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTCATGGCTGCCTCTCCTaGCATATCAGGGGCCATCGG +
Preference number: 4 (lower is better)
Translates to: DSERYKFTWFFLKTFLSSHGCLS*HIRGHR
Trigger: CCGATGGCCCCTGATATGTCAGGAGAGGCAGCCATG...ACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR TCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTGTACAGCCAATAAACTaGCAGTCAGTTACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLVQPIN*QSVTAP
Trigger: TGGGGCTGTAACTGACTGTCAGTTTATTGGCTGTAC...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCCCTCAGCCCGGACTCTaGACCTGTCACGGCGTGGTA +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSPQPGL*TCHGVV
Trigger: TACCACGCCGTGACAGGTGCAGAGTCCGGGCTGAGG...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACGGCTGCTCTGACCAATaGTCCCTCATCTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADGCSDQ*SLIWRC
Trigger: GCATCTCCAGATGAGGGAGCATTGGTCAGAGCAGCC...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGTGCTCGCTGATAGACTaGTCGCCACTCCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGCSLID*SPLLKV
Trigger: GACTTTCAGGAGTGGCGAGCAGTCTATCAGCGAGCA...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTTGAGTAGCCTGTTCTaGACAGATGTAGATGCTCGC +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGLSSLF*TDVDAR
Trigger: GCGAGCATCTACATCTGTGCAGAACAGGCTACTCAA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTTTGAGTAGCCTGTTCTaGACAGATGTAGATGCTCGC +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLLSSLF*TDVDAR
Trigger: GCGAGCATCTACATCTGTGCAGAACAGGCTACTCAA...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGATACCAACACCAACGTaGGCTGTCTGTATCATGCTG +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGIPTPT*AVCIML
Trigger: CAGCATGATACAGACAGCGCACGTTGGTGTTGGTAT...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TTCATTGCCACTGATACCAACACCAACGTGCGCTGTCTGTATCATGCTGACATCAAACACCACCCAGAGTaGGATGCTCCCCCATATCGC +
Preference number: 4 (lower is better)
Translates to: FIATDTNTNVRCLYHADIKHHPE*DAPPYR
Trigger: GCGATATGGGGGAGCATCGCACTCTGGGTGGTGTTT...GATGTCAGCATGATACAGACAGCGCACGTTGGTGTTGGTATCAGTGGCAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGAATTGGTTAGCAGACTaGGGTGACAACCTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGNWLAD*GDNLVA
Trigger: AGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATT...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTGCTGCCTTCCAAGGCTaGCCTGTTTTTCTTAACCTA +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLAAFQG*PVFLNL
Trigger: TAGGTTAAGAAAAACAGGGCAGCCTTGGAAGGCAGC...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTCTTCATGGACCAGACTaGAATTGGTTAGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLLHGPD*NWLADC
Trigger: GCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAG...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTGGAGATGTTCCCCATTaGTCACTTTCACTATCTCCC +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLGDVPH*SLSLSP
Trigger: GGGAGATAGTGAAAGTGACCAATGGGGAACATCTCC...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381668.9
CDS-3UTR TCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTATAACGACCTGTTGGTaGCACATCAGGTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLITTCW*HIRYLL
Trigger: CAGCAAATACCTGATGTGTCACCAACAGGTCGTTAT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAAGTGGTGGACTTGTTaGATTCTGCATCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLKWWTC*ILHQLG
Trigger: ACCAAGCTGATGCAGAATTCAACAAGTCCACCACTT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAATCCGTTCCACATTTaGGAGCTTAAGTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLNPFHI*ELKWWT
Trigger: AGTCCACCACTTAAGCTCTCAAATGTGGAACGGATT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGTCGATTCCAAATGGCTaGGCCCACAGAACAGACAAG +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGSIPNG*AHRTDK
Trigger: CTTGTCTGTTCTGTGGGCTCAGCCATTTGGAATCGA...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGATTCTTCCTGCCCCAGTaGATCTATAATCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRFFLPQ*IYNHRV
Trigger: GACTCGGTGATTATAGATTCACTGGGGCAGGAAGAA...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGCCAAGGGTAGTACAGTaGCGACTGAGAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGPRVVQ*RLRVSL
Trigger: AAGGGAAACTCTCAGTCGTCACTGTACTACCCTTGG...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp ACATCAAGGAGCAGAGATGCCACAGGGATGAATAACAAGCCCATCCAAAAGACTGGCCTTCATTGCCACTaGTACCAACACCAACGTGCG +
Preference number: 4 (lower is better)
Translates to: TSRSRDATGMNNKPIQKTGLHCH*YQHQRA
Trigger: CGCACGTTGGTGTTGGTATCAGTGGCAATGAAGGCC...AGTCTTTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTCTGCTCCTTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp GGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTGGCCTTCATTGCCACTaGTACCAACACCAACGTGCG +
Preference number: 4 (lower is better)
Translates to: GADFVARIQSGTSSRGSSGLHCH*YQHQRA
Trigger: CGCACGTTGGTGTTGGTATCAGTGGCAATGAAGGCC...AGAAGAACCACGTGAACTTGTACCGCTCTGAATCCTTGCAACAAAATCTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTCATGGCTGCCTCTCCTaGCATATCAGGGGCCATCGG +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFHGCLS*HIRGHR
Trigger: CCGATGGCCCCTGATATGTCAGGAGAGGCAGCCATG...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp CAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTAGCAGATAATCCGAGGCATGGCTGCCTCTCCTaGCATATCAGGGGCCATCGG +
Preference number: 4 (lower is better)
Translates to: QLSPQKCTQSFPVADNPRHGCLS*HIRGHR
Trigger: CCGATGGCCCCTGATATGTCAGGAGAGGCAGCCATG...CCTCGGATTATCTGCTACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAGAGATGCCACAGGGATaGATAACAAGCCCATCCAAA +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLREMPQG*ITSPSK
Trigger: TTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTC...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ACATCAAGGAGCAGAGATGCCACAGGGATGAATAACAAGCCCATCCAAAAGACTGTTAGCAGACTGCGGTaGCAACCTGGTAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TSRSRDATGMNNKPIQKTVSRLR*QPGSSP
Trigger: AGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAAC...AGTCTTTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTCTGCTCCTTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR TCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACAATTCCTGGTCCATGTaGTGTGAATGGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADNSWSM*CEWAGH
Trigger: GTGCCCAGCCCATTCACATCACATGGACCAGGAATT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCCAATGCTCCATCACCGATTaGAAGCGTTACGACTTTGAC +
Preference number: 4 (lower is better)
Translates to: LTYQGPSEWQATEMSRFQCSITD*KRYDFD
Trigger: GTCAAAGTCGTAACGCTTGCAATCGGTGATGGAGCA...TTGGAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR GCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTTGGAGCAGATTTTGTTaGAAGGATTCAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLWSRFC*KDSERY
Trigger: GTACCGCTCTGAATCCTTGCAACAAAATCTGCTCCA...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TTCATTGCCACTGATACCAACACCAACGTGCGCTGTCTGTATCATGCTGACATCAGAGGTAACAGAGCCTaGCTTTCAGGCTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FIATDTNTNVRCLYHADIRGNRA*LSGSPH
Trigger: ATGGGGAGAGCCTGAAAGGCAGGCTCTGTTACCTCT...GATGTCAGCATGATACAGACAGCGCACGTTGGTGTTGGTATCAGTGGCAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGTTTTCTGTAGTAGCTaGCTTCCAAGGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGVFCSS*LPRLPC
Trigger: ACAGGGCAGCCTTGGAAGGCAGCTACTACAGAAAAC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAATCTCTAGTGGGAACTaGAACACAGGACAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRISSGN*NTGQKP
Trigger: GGGCTTTTGTCCTGTGTTCCAGTTCCCACTAGAGAT...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp CTCGAAGAAGAATCTGATCTGCTCCCAGTGGAACGGTGCCATGTCCATCAAGCCTTTCAATGTAGCACATaGCTTGGGGCTCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: LEEESDLLPVERCHVHQAFQCST*LGAHFS
Trigger: GGAAAAGTGAGCCCCAAGCCATGTGCTACATTGAAA...GGCTTGATGGACATGGCACCGTTCCACTGGGAGCAGATCAGATTCTTCTTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504024.1
3UTR CAA 72 bp CGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTaGAGCAGTTGCGCCCTCTCGGTCAGGCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RYKFTWFFLKTF*SSCALSVRLFP
Trigger: TGGAAAAAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR TCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTGTGTATTTCTCAACTaGGCTCCTCGAAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGCVFLN*APRRRI
Trigger: GATTCTTCTTCGAGGAGCTCAGTTGAGAAATACACA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAAATCCGTTCCACATTTaGGAGCTTAAGTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRNPFHI*ELKWWT
Trigger: AGTCCACCACTTAAGCTCTCAAATGTGGAACGGATT...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACTCTGGCACTGCTGTGTaGCAGACTGCCATCATTGTA +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADSGTAV*QTAIIV
Trigger: TACAATGATGGCAGTCTGTCACACAGCAGTGCCAGA...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGAACTCTCTTCGAGTTTaGGTAGCCTGTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGNSLRV*VACSAQ
Trigger: CTGTGCAGAACAGGCTACTCAAACTCGAAGAGAGTT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGAGATGCCACAGGGATaGATAACAAGCCCATCCAAA +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGEMPQG*ITSPSK
Trigger: TTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTTTTGCTCAGGAAGGTaGGTCAGTTCCTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGFCSGR*VSSLRM
Trigger: CATTCTTAAGGAACTGACTCACCTTCCTGAGCAAAA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCACCTCAGCCCGGACTCTaGACCTGTCACGGCGTGGTA +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSPQPGL*TCHGVV
Trigger: TACCACGCCGTGACAGGTGCAGAGTCCGGGCTGAGG...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGGGACTTGTTGAATTCTaGATCAGCTTGGTGTCATGT +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGGLVEF*ISLVSC
Trigger: ACATGACACCAAGCTGATGCAGAATTCAACAAGTCC...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGGCTGCTCTGACCAATaGTCCCTCATCTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHGCSDQ*SLIWRC
Trigger: GCATCTCCAGATGAGGGAGCATTGGTCAGAGCAGCC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTTTCCCATTTCCAAATaGAGTACCATACTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGFPISK*STILKG
Trigger: GCCCTTCAGTATGGTACTGCATTTGGAAATGGGAAA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCTTTCCCATTTCCAAATaGAGTACCATACTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LLTYQGPSEWQATEMSRFFPISK*STILKG
Trigger: GCCCTTCAGTATGGTACTGCATTTGGAAATGGGAAA...GAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR GCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACGTTTTCTGTAGTAGCTaGCTTCCAAGGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADVFCSS*LPRLPC
Trigger: ACAGGGCAGCCTTGGAAGGCAGCTACTACAGAAAAC...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GCTTGCAGCAGGAGCCAGAAATGTCCACCAAAACCAGCTTATCTCTCGGCATTTGATTCCAACACTGCTTaGAGCAGGAGCCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: ACSRSQKCPPKPAYLSAFDSNTA*SRSQKC
Trigger: ACATTTCTGGCTCCTGCTGCAAGCAGTGTTGGAATC...AAATGCCGAGAGATAAGCTGGTTTTGGTGGACATTTCTGGCTCCTGCTGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTCAATGCTCCCTCATCTaGAGATGCTGCTTGATAAAT +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLQCSLI*RCCLIN
Trigger: ATTTATCAAGCAGCATCTCCAGATGAGGGAGCATTG...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp CTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCCAACCCCATATCGCTATGTaGCTGAACCATGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: LTYQGPSEWQATEMSRFQPHIAM*LNHVQY
Trigger: ATATTGGACATGGTTCAGCCACATAGCGATATGGGG...TTGGAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR CCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAAAGTACAACTGCTCCTaGGTCTTGAGATTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRKYNCS*VLRFCL
Trigger: GAGGCAAAATCTCAAGACCCAGGAGCAGTTGTACTT...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTACAAAGTGTTTCTCTaGAGGGGTGCATTTCACTCT +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGYKVFL*RGAFHS
Trigger: AGAGTGAAATGCACCCCTCCAGAGAAACACTTTGTA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR CAA 72 bp GTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTaGCGCCCTCTCGGTCAGGCTTTTTCCAAGTACAAC +
Preference number: 4 (lower is better)
Translates to: VHVVLLKDVLEQ*RPLGQAFSKYN
Trigger: GTTGTACTTGGAAAAAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR TCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACAGAAAACCTTGGTGTTaGAGTCCAGGGCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADRKPWC*SPGHSE
Trigger: CTCAGAATGCCCTGGACTTCAACACCAAGGTTTTCT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAAGGCCATTTAAACAATaGACCCAGAAAACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRRPFKQ*TQKTLV
Trigger: CACCAAGGTTTTCTGGGTTCATTGTTTAAATGGCCT...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAAATGCAGTACCATACTaGAGGGCTTTTAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRNAVPY*RAFSGN
Trigger: GTTTCCACTAAAAGCCCTTCAGTATGGTACTGCATT...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp CTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCCAAGAACCATGTCCAATATaGTGTCTCCAATCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LTYQGPSEWQATEMSRFQEPCPI*CLQSSF
Trigger: AAAGCTGGATTGGAGACATCATATTGGACATGGTTC...TTGGAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGACAGGAAAAGCTGCTCTaGATATTCATTCACTGGACA +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRQEKLL*IFIHWT
Trigger: TGTCCAGTGAATGAATATTCAGAGCAGCTTTTCCTG...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTGGCTTGGGGCTCACTTaGGGACAGACTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFGLGLT*GQTDEI
Trigger: GATCTCATCAGTCTGTCCTCAAGTGAGCCCCAAGCC...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381668.9
CDS-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGCAGTGTCAGCTCCTTTaGAGTAGAGTCGTAACTTTC +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGQCQLL*SRVVTF
Trigger: GAAAGTTACGACTCTACTGCAAAGGAGCTGACACTG...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGAGGAATTAGCTGCCTaGAGGCCTTCATTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHEELAA*RPSLPL
Trigger: CAGTGGCAATGAAGGCCTGCAGGCAGCTAATTCCTC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCAAACACCACCCAGAGTaGGATGCTCCCCCATATCGC +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSKHHPE*DAPPYR
Trigger: GCGATATGGGGGAGCATCGCACTCTGGGTGGTGTTT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTTTTCCAAGTACAACTaGTCCTGGGTCTTGAGATTT +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGFSKYN*SWVLRF
Trigger: AAATCTCAAGACCCAGGAGCAGTTGTACTTGGAAAA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCACGTTCTTGAGCAGTTaGGCCCTCTCGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSTFLSS*ALSVRL
Trigger: AAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGT...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp CAGGAGCCAGAAATGTCCACCAAAACCAGCTTATCTCTCGGCATTTACATAAACGTCCTTACTTCCTCCTaGTCAGCCAGTGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QEPEMSTKTSLSLGIYINVLTSS*SASEVF
Trigger: GAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGAC...GTTTATGTAAATGCCGAGAGATAAGCTGGTTTTGGTGGACATTTCTGGCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGACAATGCTCCCTCATCTaGAGATGCTGCTTGATAAAT +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRQCSLI*RCCLIN
Trigger: ATTTATCAAGCAGCATCTCCAGATGAGGGAGCATTG...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGACGGTACAAGTTCACGTaGTTCTTCTTAAAGACGTTC +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRRYKFT*FFLKTF
Trigger: GAACGTCTTTAAGAAGAACCACGTGAACTTGTACCG...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGCGGGCCTCTGTTTCGTaGTATCATATGCTCTTATCA +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGRASVS*YHMLLS
Trigger: TGATAAGAGCATATGATACCACGAAACAGAGGCCCG...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTCAAACAGGAAGGGCTTaGGAAGTAAAGTATGTAAAC +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLQTGRA*EVKYVN
Trigger: GTTTACATACTTTACTTCCCAAGCCCTTCCTGTTTG...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTTCAAAAACAGGACGATaGGACAAAGAGGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLSKTGR*DKEAQI
Trigger: AATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGA...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCCCTCGAAGAAGAATCTaGTCTGCTCCCAGTGGAACG +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSPRRRI*SAPSGT
Trigger: CGTTCCACTGGGAGCAGATCAGATTCTTCTTCGAGG...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTATAGGTGCAGTTGGATaGTTATTTTGGAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLIGAVG*LFWRFS
Trigger: GGAAAATCTCCAAAATAATCATCCAACTGCACCTAT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGAGTGCGAACAATCACTaGCATTCTTTTCCTAGCACT +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGSANNH*HSFPST
Trigger: AGTGCTAGGAAAAGAATGTCAGTGATTGTTCGCACT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAGTTGCTCCAAGTAGCTaGAGATTCTTTTCAATCAAC +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRVAPSS*RFFSIN
Trigger: GTTGATTGAAAAGAATCTTCAGCTACTTGGAGCAAC...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGATGGTTTCAGGCACTTaGTCTTGTAATTTATCCTCA +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGMVSGT*SCNLSS
Trigger: TGAGGATAAATTACAAGATCAAGTGCCTGAAACCAT...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAAGTCCAGGGCATTCTaGGATGTTTTGTATAATTCA +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLKSRAF*DVLYNS
Trigger: TGAATTATACAAAACATCTCAGAATGCCCTGGACTT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACACATGGCTGCCTCTCCTaGCATATCAGGGGCCATCGG +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTHGCLS*HIRGHR
Trigger: CCGATGGCCCCTGATATGTCAGGAGAGGCAGCCATG...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGATTCCATTTTCATCTTaGGAGAACGCATACCCATGG +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGIPFSS*ENAYPW
Trigger: CCATGGGTATGCGTTCTCTCAAGATGAAAATGGAAT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTTATCACTTCAGACTGTaGAACGATTCCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLYHFRL*NDSIFI
Trigger: GATGAAAATGGAATCGTTTCACAGTCTGAAGTGATA...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGCAGGAAAAGCTGCTCTaGATATTCATTCACTGGACA +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGQEKLL*IFIHWT
Trigger: TGTCCAGTGAATGAATATTCAGAGCAGCTTTTCCTG...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGCTCATCTGGAGATGCTaGTTGATAAATAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGLIWRC*LINNLV
Trigger: GACAAGATTATTTATCAAGCAGCATCTCCAGATGAG...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGCCTTCTGTAGCAAACTaGTCTAAATGTTTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGPSVAN*SKCFRV
Trigger: TACCCTAAAACATTTAGAGCAGTTTGCTACAGAAGG...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTCCTTCTGTAGCAAACTaGTCTAAATGTTTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLPSVAN*SKCFRV
Trigger: TACCCTAAAACATTTAGAGCAGTTTGCTACAGAAGG...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCGAGGAATTAGCTGCCTaGAGGCCTTCATTGCCACTG +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSEELAA*RPSLPL
Trigger: CAGTGGCAATGAAGGCCTGCAGGCAGCTAATTCCTC...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCGTCAGAGGAATTAGCTaGCTGCAGGCCTTCATTGCC +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSVRGIS*LQAFIA
Trigger: GGCAATGAAGGCCTGCAGGCAGCTAATTCCTCTGAC...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCGTCAGAGGAATTAGCTaGCTGCAGGCCTTCATTGCC +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSVRGIS*LQAFIA
Trigger: GGCAATGAAGGCCTGCAGGCAGCTAATTCCTCTGAC...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGTTTCCCATTTCCAAATaGAGTACCATACTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGFPISK*STILKG
Trigger: GCCCTTCAGTATGGTACTGCATTTGGAAATGGGAAA...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TTCATTGCCACTGATACCAACACCAACGTGCGCTGTCTGTATCATGCTGACATCTTGGAAAGTCAGGCATaGAGATCTTACAGCGGAACT +
Preference number: 4 (lower is better)
Translates to: FIATDTNTNVRCLYHADILESQA*RSYSGT
Trigger: AGTTCCGCTGTAAGATCTGCATGCCTGACTTTCCAA...GATGTCAGCATGATACAGACAGCGCACGTTGGTGTTGGTATCAGTGGCAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTGTACAGTGCACGCAATaGAAAACAAATTATCATGTG +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLVQCTQ*KTNYHV
Trigger: CACATGATAATTTGTTTTGCATTGCGTGCACTGTAC...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CGGCAGAGGATGGGTGCTTATTCTTTCTGCTCCTCGCTATTTCCAGATTCTTATACAGCCTATTCACACTaGCAACAGGGAGCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RQRMGAYSFCSSLFPDSYTAYSH*QQGALK
Trigger: TTTGAGAGCTCCCTGTTGGCAGTGTGAATAGGCTGT...ATAAGAATCTGGAAATAGCGAGGAGCAGAAAGAATAAGCACCCATCCTCTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR GCA 90 bp CGTCCCATCCCCTTTACCACCCAAAATGAACAGTCCTTGCCACATCAAATTTATTCGGCAGAGGATGGGTaGTTATTCTTTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RPIPFTTQNEQSLPHQIYSAEDG*LFFLLL
Trigger: GAGGAGCAGAAAGAATAAGCACCCATCCTCTGCCGA...ATAAATTTGATGTGGCAAGGACTGTTCATTTTGGGTGGTAAAGGGGATGGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR GCA 90 bp GCTTGCAGCAGGAGCCAGAAATGTCCACCAAAACCAGCTTATCTCTCGGCATTTTTGAATTTTCTTCACTaGCACTCCAGGAACATGGCT +
Preference number: 4 (lower is better)
Translates to: ACSRSQKCPPKPAYLSAFLNFLH*HSRNMA
Trigger: AGCCATGTTCCTGGAGTGGCAGTGAAGAAAATTCAA...AAATGCCGAGAGATAAGCTGGTTTTGGTGGACATTTCTGGCTCCTGCTGCAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGCCTTCGATTCCAAATaGCTGAGCCCACAGAACAGA +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHAFDSK*LSPQNR
Trigger: TCTGTTCTGTGGGCTCAGCCATTTGGAATCGAAGGC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTTCATTAGCGTTTCTATaGTTTCAGGCACTTGATCTT +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLSLAFL*FQALDL
Trigger: AAGATCAAGTGCCTGAAACCATAGAAACGCTAATGA...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp CTTGAGAGAACGCATACCCATGGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTCGGGCCTCTGTTTCGTaGTATCATATGCTCTTATCA +
Preference number: 4 (lower is better)
Translates to: LERTHTHGADFVARIQSGRASVS*YHMLLS
Trigger: TGATAAGAGCATATGATACCACGAAACAGAGGCCCG...ACCGCTCTGAATCCTTGCAACAAAATCTGCTCCATGGGTATGCGTTCTCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CCA 90 bp CTTTGCAAGCATTTTCATTTTGACCTAACCAGCTCTGCTCTGCTGGCTGGTCTCCTATGGGAGAGAAGATaGGGAAACAGCCTATTCACA +
Preference number: 4 (lower is better)
Translates to: LCKHFHFDLTSSALLAGLLWERR*GNSLFT
Trigger: TGTGAATAGGCTGTTTCCCCATCTTCTCTCCCATAG...GAGACCAGCCAGCAGAGCAGAGCTGGTTAGGTCAAAATGAAAATGCTTGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp TTATTGGTATTGAAGGTGTTTATGTGGTCCCAGAAGCCGCATAAGTGGCCAGTGCAGAAGCCGCATAAGTaGCCAGTGCTTACACAGATA +
Preference number: 4 (lower is better)
Translates to: LLVLKVFMWSQKPHKWPVQKPHK*PVLTQI
Trigger: TATCTGTGTAAGCACTGGCCACTTATGCGGCTTCTG...CACTGGCCACTTATGCGGCTTCTGGGACCACATAAACACCTTCAATACCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR TCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTCGATTCCAAATGGCTaGGCCCACAGAACAGACAAG +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSSIPNG*AHRTDK
Trigger: CTTGTCTGTTCTGTGGGCTCAGCCATTTGGAATCGA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAATAGGTGCAGTTGGATaGTTATTTTGGAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRIGAVG*LFWRFS
Trigger: GGAAAATCTCCAAAATAATCATCCAACTGCACCTAT...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACAGTGCGAACAATCACTaGCATTCTTTTCCTAGCACT +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADSANNH*HSFPST
Trigger: AGTGCTAGGAAAAGAATGTCAGTGATTGTTCGCACT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACAATGCAGTACCATACTaGAGGGCTTTTAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADNAVPY*RAFSGN
Trigger: GTTTCCACTAAAAGCCCTTCAGTATGGTACTGCATT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACAAAAGACTCCAGAACTaGACAACATGGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHKRLQN*TTWLPL
Trigger: GAGAGGCAGCCATGTTGTTCAGTTCTGGAGTCTTTT...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCTGTCCATCAGCGAGATaGGCTCAGATCTACCTTTCC +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSCPSAR*AQIYLS
Trigger: GGAAAGGTAGATCTGAGCTCATCTCGCTGATGGACA...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGTACAGCCAATAAACTaGCAGTCAGTTACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHVQPIN*QSVTAP
Trigger: TGGGGCTGTAACTGACTGTCAGTTTATTGGCTGTAC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGATGGGCATATGACTACTaGACTAGAAAAACACTTACT +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRWAYDY*TRKTLT
Trigger: AGTAAGTGTTTTTCTAGTTCAGTAGTCATATGCCCA...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGGGAGATTTATTTGCTaGGAAGTTTTGGGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGGRFIC*EVLGAL
Trigger: TAAAGCTCCCAAAACTTCTCAGCAAATAAATCTCCC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CCAGCTTTCAAACACACAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTGTCAGAGGAATTAGCTaGCTGCAGGCCTTCATTGCC +
Preference number: 4 (lower is better)
Translates to: PAFKHTVITTKVYTKFPSVRGIS*LQAFIA
Trigger: GGCAATGAAGGCCTGCAGGCAGCTAATTCCTCTGAC...ACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTGTGTGTTTGAAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR GCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGCCACCCAGAGTGCGATaGTCCCCCATATCGCTATGT +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKPPRVR*SPISLC
Trigger: ACATAGCGATATGGGGGAGCATCGCACTCTGGGTGG...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGACGTTCTTGAGCAGTTaGGCCCTCTCGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKTFLSS*ALSVRL
Trigger: AAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCTTTATATTAAAATTCTaGAGAAGGGTGCCACTGATG +
Preference number: 4 (lower is better)
Translates to: LLTYQGPSEWQATEMSRFFILKF*RRVPLM
Trigger: CATCAGTGGCACCCTTCTGCAGAATTTTAATATAAA...GAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAGTAAGTGTTGTACAGTaGACGCAATGCAAAACAAAT +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRVSVVQ*TQCKTN
Trigger: ATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGCTATCAAAGGGCAACTaGACAAAAATAAACACGATT +
Preference number: 4 (lower is better)
Translates to: GSHHNTGCATQDTGISSGLSKGN*TKINTI
Trigger: AATCGTGTTTATTTTTGTGCAGTTGCCCTTTGATAG...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGATTCTGCTCACATCTTTaGAAGAACAGATTTACCTGT +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRFCSHL*KNRFTC
Trigger: ACAGGTAAATCTGTTCTTGCAAAGATGTGAGCAGAA...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACTTTGTCAGCTGGGGCTaGTTGATGAAAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADFVSWG*LMKIVL
Trigger: AAGGACTATTTTCATCAACCAGCCCCAGCTGACAAA...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACTTTACCTTTTCCCAGTaGACAATTTCCCAAGCACCA +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADFTFSQ*TISQAP
Trigger: TGGTGCTTGGGAAATTGTCCACTGGGAAAAGGTAAA...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264449.14
CDS-3UTR CCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACAATTCTGCATCAGCTTaGTGTCATGTCCAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADNSASA*CHVQCR
Trigger: TCTACACTGGACATGACACCAAGCTGATGCAGAATT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAAGTATAAGATGCACTTaGAGACTCTGTTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRSIRCT*RLCYSS
Trigger: GGAACTATAACAGAGTCTCCAAGTGCATCTTATACT...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp CTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCAACAGAATAACTGAGTaGAAGAGGCCATTTAAACAA +
Preference number: 4 (lower is better)
Translates to: LLTYQGPSEWQATEMSRFNRITE*KRPFKQ
Trigger: TTGTTTAAATGGCCTCTTCCACTCAGTTATTCTGTT...GAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAACAGAATAACTGAGTaGAAGAGGCCATTTAAACAA +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLNRITE*KRPFKQ
Trigger: TTGTTTAAATGGCCTCTTCCACTCAGTTATTCTGTT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp CGGGCCTCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGACCCCATATCGCTATGTaGCTGAACCATGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: RASVSWYHMLLSLQTVKRPHIAM*LNHVQY
Trigger: ATATTGGACATGGTTCAGCCACATAGCGATATGGGG...TCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGAGGCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACCGGTACAAGTTCACGTaGTTCTTCTTAAAGACGTTC +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADRYKFT*FFLKTF
Trigger: GAACGTCTTTAAGAAGAACCACGTGAACTTGTACCG...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTCTTCATGGACCAGACTaGAATTGGTTAGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: DSERYKFTWFFLKTFLSSLHGPD*NWLADC
Trigger: GCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAG...ACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGTTTAAGAAAGCCCTCTaGCAAGATACCAGGTCATTT +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGFKKAL*QDTRSF
Trigger: AAATGACCTGGTATCTTGCCAGAGGGCTTTCTTAAA...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TTCATTGCCACTGATACCAACACCAACGTGCGCTGTCTGTATCATGCTGACATCTACAAAGTGTTTCTCTaGAGGGGTGCATTTCACTCT +
Preference number: 4 (lower is better)
Translates to: FIATDTNTNVRCLYHADIYKVFL*RGAFHS
Trigger: AGAGTGAAATGCACCCCTCCAGAGAAACACTTTGTA...GATGTCAGCATGATACAGACAGCGCACGTTGGTGTTGGTATCAGTGGCAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CCA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTGAACAGATTTACCTGTaGAAAGTTGCTGTTAATTCA +
Preference number: 4 (lower is better)
Translates to: GPDWNWLADCGDNLVALLEQIYL*KVAVNS
Trigger: TGAATTAACAGCAACTTTCCACAGGTAAATCTGTTC...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTTTCAATGTAGCACATaGCTTGGGGCTCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHFQCST*LGAHLR
Trigger: CCTCAAGTGAGCCCCAAGCCATGTGCTACATTGAAA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381668.9
3UTR CAA 72 bp TCCTGGATAATTTCAGGGAGATCTCTGGGGTTCTGTTaGAATTTTCTTCACTGCCACTCCAGGAACATGGCT +
Preference number: 4 (lower is better)
Translates to: SWIISGRSLGFC*NFLHCHSRNMA
Trigger: AGCCATGTTCCTGGAGTGGCAGTGAAGAAAATTCAAACAGAACCCCAGAGATCTCCCTGAAATTATCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR CAA 72 bp ATCTTGAGAGAACGCATACCCATGGAGCAGATTTTGTaGCAAGGATTCAGAGCGGTACAAGTTCACGTGGTT +
Preference number: 4 (lower is better)
Translates to: ILRERIPMEQIL*QGFRAVQVHVV
Trigger: AACCACGTGAACTTGTACCGCTCTGAATCCTTGCAACAAAATCTGCTCCATGGGTATGCGTTCTCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR TCA 90 bp TGCTCCCAGTGGAACGGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAATCAACTGTCAACGTCTTTaGTATCTGATGTTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: CSQWNGAMSIKPYVSNKINCQRL*YLMLLV
Trigger: TACCAGCAACATCAGATATCAAAGACGTTGACAGTT...GATTTTGTTGGAAACATAAGGCTTGATGGACATGGCACCGTTCCACTGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR TCA 90 bp CTTTCACACTCAATTCTGCCAGAAATCCTCATCAAACTGTCAACGTCTTTGATACCTCGAAGAAGAATCTaGTCTGCTCCCAGTGGAACG +
Preference number: 4 (lower is better)
Translates to: LSHSILPEILIKLSTSLIPRRRI*SAPSGT
Trigger: CGTTCCACTGGGAGCAGATCAGATTCTTCTTCGAGG...TATCAAAGACGTTGACAGTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR TCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTTCATCTCCAAACTGTaGGTTCTGCCCATAAGCAAC +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHFISKL*VLPISN
Trigger: GTTGCTTATGGGCAGAACTCACAGTTTGGAGATGAA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264449.14
CDS-3UTR TCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGATGGTTTCAGGCACTTaGTCTTGTAATTTATCCTCA +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGMVSGT*SCNLSS
Trigger: TGAGGATAAATTACAAGATCAAGTGCCTGAAACCAT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCGGCCTTCATTGCCACTaGTACCAACACCAACGTGCG +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFGLHCH*YQHQRA
Trigger: CGCACGTTGGTGTTGGTATCAGTGGCAATGAAGGCC...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCAAAAGACTCCAGAACTaGACAACATGGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSKRLQN*TTWLPL
Trigger: GAGAGGCAGCCATGTTGTTCAGTTCTGGAGTCTTTT...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTTTTGCCTCCAGCTCCTaGACTTCATCGACCAATGTT +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFFASSS*TSSTNV
Trigger: AACATTGGTCGATGAAGTTCAGGAGCTGGAGGCAAA...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACTGTTTCAGCATATCCTaGAATCTAAGTCTGGATACC +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADCFSIS*NLSLDT
Trigger: GGTATCCAGACTTAGATTTCAGGATATGCTGAAACA...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGAATTCCTGGTCCATGTaGTGTGAATGGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKNSWSM*CEWAGH
Trigger: GTGCCCAGCCCATTCACATCACATGGACCAGGAATT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGTGCTCGCTGATAGACTaGTCGCCACTCCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKCSLID*SPLLKV
Trigger: GACTTTCAGGAGTGGCGAGCAGTCTATCAGCGAGCA...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCATACCAACACCAACGTaGGCTGTCTGTATCATGCTG +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSIPTPT*AVCIML
Trigger: CAGCATGATACAGACAGCGCACGTTGGTGTTGGTAT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAGAGGAATTAGCTGCCTaGAGGCCTTCATTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSEELAA*RPSLPL
Trigger: CAGTGGCAATGAAGGCCTGCAGGCAGCTAATTCCTC...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTGGAGCAGATTTTGTTaGAAGGATTCAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHWSRFC*KDSERY
Trigger: GTACCGCTCTGAATCCTTGCAACAAAATCTGCTCCA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAAGAGGTAACAGAGCCTaGCTTTCAGGCTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSRGNRA*LSGSPH
Trigger: ATGGGGAGAGCCTGAAAGGCAGGCTCTGTTACCTCT...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGTTTCTCTGGAGGGGTaGATTTCACTCTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHVSLEG*ISLLLS
Trigger: AGAAAGCAAGAGTGAAATGCACCCCTCCAGAGAAAC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCGCTGCCTTCCAAGGCTaGCCTGTTTTTCTTAACCTA +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSAAFQG*PVFLNL
Trigger: TAGGTTAAGAAAAACAGGGCAGCCTTGGAAGGCAGC...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGAATACTCTCCACTCATaGAGCTTCACAATTTCTACA +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGNTLHS*SFTIST
Trigger: TGTAGAAATTGTGAAGCTGCATGAGTGGAGAGTATT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TTATTGGTATTGAAGGTGTTTATGTGGTCCCAGAAGCCGCATAAGTGGCCAGTGGGTGCTTATTCTTTCTaGTCCTCGCTATTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LLVLKVFMWSQKPHKWPVGAYSF*SSLFPD
Trigger: ATCTGGAAATAGCGAGGAGCAGAAAGAATAAGCACC...CACTGGCCACTTATGCGGCTTCTGGGACCACATAAACACCTTCAATACCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGATTTCACCATCTAAGTTaGATGTTTCAATGTAGCACA +
Preference number: 4 (lower is better)
Translates to: PDWNWLADCGDNLVALLRFHHLS*MFQCST
Trigger: TGTGCTACATTGAAACATCCAACTTAGATGGTGAAA...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGAGAACGCATACCCATaGAGCAGATTTTGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHENAYP*SRFCCK
Trigger: CTTGCAACAAAATCTGCTCCATGGGTATGCGTTCTC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACTCAAAAACAGGACGATaGGACAAAGAGGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADSKTGR*DKEAQI
Trigger: AATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGA...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp CGGGCCTCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGACAGTTTCAGCAGGAATaGTTTTTCAGGGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: RASVSWYHMLLSLQTVKRQFQQE*FFRELK
Trigger: TTTCAGCTCCCTGAAAAACCATTCCTGCTGAAACTG...TCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGAGGCCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CCA 90 bp ATGAATCAAAAGGCTGGAAAAGGTAGTGGATTCCAACACTGCTTGCAGCAGGAGCCGGCTGTTTCAAATTaGGAGAATATTGCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: MNQKAGKGSGFQHCLQQEPAVSN*ENIAKG
Trigger: ACCCTTTGCAATATTCTCCCAATTTGAAACAGCCGG...CTCCTGCTGCAAGCAGTGTTGGAATCCACTACCTTTTCCAGCCTTTTGATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR TCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCATAACGACCTGTTGGTaGCACATCAGGTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSITTCW*HIRYLL
Trigger: CAGCAAATACCTGATGTGTCACCAACAGGTCGTTAT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACACCTCGAAGAAGAATCTaGTCTGCTCCCAGTGGAACG +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTPRRRI*SAPSGT
Trigger: CGTTCCACTGGGAGCAGATCAGATTCTTCTTCGAGG...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCAAGTGGTGGACTTGTTaGATTCTGCATCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSKWWTC*ILHQLG
Trigger: ACCAAGCTGATGCAGAATTCAACAAGTCCACCACTT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAACTGCTCGCCACTCCTaGAAGTCGCTCTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGTARHS*KSLSEI
Trigger: GATTTCAGAGAGCGACTTTCAGGAGTGGCGAGCAGT...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGCCAAGGGTAGTACAGTaGCGACTGAGAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKPRVVQ*RLRVSL
Trigger: AAGGGAAACTCTCAGTCGTCACTGTACTACCCTTGG...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp ACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAACACACAGTTATCACCAAAAAGACTCCAGAACTaGACAACATGGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TMSNMMSPIQLSNTQLSPKRLQN*TTWLPL
Trigger: GAGAGGCAGCCATGTTGTTCAGTTCTGGAGTCTTTT...TGGTGATAACTGTGTGTTTGAAAGCTGGATTGGAGACATCATATTGGACATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp CCAGCTTTCAAACACACAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTGAGATGCCACAGGGATaGATAACAAGCCCATCCAAA +
Preference number: 4 (lower is better)
Translates to: PAFKHTVITTKVYTKFPSEMPQG*ITSPSK
Trigger: TTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTC...ACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTGTGTGTTTGAAAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACATTCCATTTTCATCTTaGGAGAACGCATACCCATGG +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHIPFSS*ENAYPW
Trigger: CCATGGGTATGCGTTCTCTCAAGATGAAAATGGAAT...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp CTTGAGAGAACGCATACCCATGGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTTATCACTTCAGACTGTaGAACGATTCCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: LERTHTHGADFVARIQSGYHFRL*NDSIFI
Trigger: GATGAAAATGGAATCGTTTCACAGTCTGAAGTGATA...ACCGCTCTGAATCCTTGCAACAAAATCTGCTCCATGGGTATGCGTTCTCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR TCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGTGTCCATCAGCGAGATaGGCTCAGATCTACCTTTCC +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKCPSAR*AQIYLS
Trigger: GGAAAGGTAGATCTGAGCTCATCTCGCTGATGGACA...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAAATTCCTGGTCCATGTaGTGTGAATGGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTNSWSM*CEWAGH
Trigger: GTGCCCAGCCCATTCACATCACATGGACCAGGAATT...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GGGTTCTGTTTGAATTTTCTTCACTGCCACTCCAGGAACATGGCTAGAAATCCATTTGACAAGGTTTTATaGCGTGACTTTACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GFCLNFLHCHSRNMARNPFDKVL*RDFTCS
Trigger: GCTGCAGGTAAAGTCACGTCATAAAACCTTGTCAAA...TGGATTTCTAGCCATGTTCCTGGAGTGGCAGTGAAGAAAATTCAAACAGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR GCA 90 bp ATCTGCTCCCAGTGGAACGGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAATTTCACACTCAATTCTaGCAGAAATCCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: ICSQWNGAMSIKPYVSNKFHTQF*QKSSSN
Trigger: GTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAA...TTTGTTGGAAACATAAGGCTTGATGGACATGGCACCGTTCCACTGGGAGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR GCA 90 bp ACTTTCACACTCAATTCTGCCAGAAATCCTCATCAAACTGTCAACGTCTTTGATAAGAAGAATCTGATCTaGTCCCAGTGGAACGGTGCC +
Preference number: 4 (lower is better)
Translates to: TFTLNSARNPHQTVNVFDKKNLI*SQWNGA
Trigger: GGCACCGTTCCACTGGGAGCAGATCAGATTCTTCTT...ATCAAAGACGTTGACAGTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGGACTTGTTGAATTCTaGATCAGCTTGGTGTCATGT +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHGLVEF*ISLVSC
Trigger: ACATGACACCAAGCTGATGCAGAATTCAACAAGTCC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTTCTCGCTCTGGCACTaGTGTGTGACAGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFFSLWH*CVTDCH
Trigger: ATGGCAGTCTGTCACACAGCAGTGCCAGAGCGAGAA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGAAAACAAAATTCAATTaGTTGGCTGCTCTGACCAAT +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGKTKFN*LAALTN
Trigger: ATTGGTCAGAGCAGCCAAGCAATTGAATTTTGTTTT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTCAGTGTCAGCTCCTTTaGAGTAGAGTCGTAACTTTC +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFQCQLL*SRVVTF
Trigger: GAAAGTTACGACTCTACTGCAAAGGAGCTGACACTG...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAGTCAGAGGAATTAGCTaGCTGCAGGCCTTCATTGCC +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTVRGIS*LQAFIA
Trigger: GGCAATGAAGGCCTGCAGGCAGCTAATTCCTCTGAC...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCTGGAGCAGATTTTGTTaGAAGGATTCAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSWSRFC*KDSERY
Trigger: GTACCGCTCTGAATCCTTGCAACAAAATCTGCTCCA...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACTTTCGTGGTATCATATaGTCTTATCACTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADFRGII*SYHFRL
Trigger: CAGTCTGAAGTGATAAGAGCATATGATACCACGAAA...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CCAGCTTTCAAACACACAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTAATTGGTTAGCAGACTaGGGTGACAACCTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: PAFKHTVITTKVYTKFPSNWLAD*GDNLVA
Trigger: AGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATT...ACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTGTGTGTTTGAAAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp ATCCAAAAGACTCCAGAACTGAACAACATGGCTGCCTCTCCTGACATATCAGGGGTGTTACAGTACAGTTaGACAGTGCTTATGTCTATA +
Preference number: 4 (lower is better)
Translates to: IQKTPELNNMAASPDISGVLQYS*TVLMSI
Trigger: TATAGACATAAGCACTGTGCAACTGTACTGTAACAC...CCCTGATATGTCAGGAGAGGCAGCCATGTTGTTCAGTTCTGGAGTCTTTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGCATCACTCAATCTACTaGATTAGCCAGATTTTTAGA +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGHHSIY*ISQIFR
Trigger: TCTAAAAATCTGGCTAATGCAGTAGATTGAGTGATG...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGCATTTAGAAAGTCCATaGTCAATACCACTGTATACT +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGHLESP*SIPLYT
Trigger: AGTATACAGTGGTATTGAGCATGGACTTTCTAAATG...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCGTCCTTACTTCCTCCTaGTCAGCCAGTGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFVLTSS*SASEVF
Trigger: GAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGAC...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGTCCTTACTTCCTCCTaGTCAGCCAGTGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTVLTSS*SASEVF
Trigger: GAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGAC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGAACAGAATAACTGAGTaGAAGAGGCCATTTAAACAA +
Preference number: 4 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGNRITE*KRPFKQ
Trigger: TTGTTTAAATGGCCTCTTCCACTCAGTTATTCTGTT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCCCCCATATCGCTATGTaGCTGAACCATGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSPHIAM*LNHVQY
Trigger: ATATTGGACATGGTTCAGCCACATAGCGATATGGGG...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCCGGGCCTCTGTTTCGTaGTATCATATGCTCTTATCA +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSRASVS*YHMLLS
Trigger: TGATAAGAGCATATGATACCACGAAACAGAGGCCCG...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGGACCAGACTGGAATTaGTTAGCAGACTGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTGPDWN*LADCGD
Trigger: GTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTACCTTTCCTCTTCATaGACCAGACTGGAATTGGTT +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHYLSSS*TRLELV
Trigger: AACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp CCAGCTTTCAAACACACAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTATCTCTAGTGGGAACTaGAACACAGGACAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PAFKHTVITTKVYTKFPSISSGN*NTGQKP
Trigger: GGGCTTTTGTCCTGTGTTCCAGTTCCCACTAGAGAT...ACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTGTGTGTTTGAAAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CCA 90 bp AACCCCGAAATCAGCAATTTGAGCAATTTGACCAGACACTGTAAACAGAGATGCTGCTGGCTGGTCTCATaGCATTCTTTGGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NPEISNLSNLTRHCKQRCCWLVS*HSLVVL
Trigger: AAGAACTACCAAAGAATGCCATGAGACCAGCCAGCA...GCATCTCTGTTTACAGTGTCTGGTCAAATTGCTCAAATTGCTGATTTCGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR TCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTCTGGCACTGCTGTGTaGCAGACTGCCATCATTGTA +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFSGTAV*QTAIIV
Trigger: TACAATGATGGCAGTCTGTCACACAGCAGTGCCAGA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp ACATCAAGGAGCAGAGATGCCACAGGGATGAATAACAAGCCCATCCAAAAGACTAAGTCCAGGGCATTCTaGGATGTTTTGTATAATTCA +
Preference number: 4 (lower is better)
Translates to: TSRSRDATGMNNKPIQKTKSRAF*DVLYNS
Trigger: TGAATTATACAAAACATCTCAGAATGCCCTGGACTT...AGTCTTTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTCTGCTCCTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp CAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTAGCAGATAATCCGAGGAGGCCATTTAAACAATaGACCCAGAAAACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QLSPQKCTQSFPVADNPRRPFKQ*TQKTLV
Trigger: CACCAAGGTTTTCTGGGTTCATTGTTTAAATGGCCT...CCTCGGATTATCTGCTACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp ATCGCTATGTGGCTGAACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAAGAACCATGTCCAATATaGTGTCTCCAATCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: IAMWLNHVQYDVSNPAFKEPCPI*CLQSSF
Trigger: AAAGCTGGATTGGAGACATCATATTGGACATGGTTC...TTTGAAAGCTGGATTGGAGACATCATATTGGACATGGTTCAGCCACATAGCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCAGATGTGTTGATTCATaGCTCTCTCAATCTGTACCC +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSRCVDS*LSQSVP
Trigger: GGGTACAGATTGAGAGAGTCATGAATCAACACATCT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTCAATCTATTACTTTCTaGCTAGCATTCATTTCCCGA +
Preference number: 4 (lower is better)
Translates to: GADFVARIQSGTSSRGSSQSITF*LAFISR
Trigger: TCGGGAAATGAATGCTAGTCAGAAAGTAATAGATTG...AGAAGAACCACGTGAACTTGTACCGCTCTGAATCCTTGCAACAAAATCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAAAGAAGAATCTGATCTaGTCCCAGTGGAACGGTGCC +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTKKNLI*SQWNGA
Trigger: GGCACCGTTCCACTGGGAGCAGATCAGATTCTTCTT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACAAGAAGAATCTGATCTaGTCCCAGTGGAACGGTGCC +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNKKNLI*SQWNGA
Trigger: GGCACCGTTCCACTGGGAGCAGATCAGATTCTTCTT...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTACTTTCCAGATGGAGTaGGAACAATCACTGACATTC +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFTFQME*EQSLTF
Trigger: GAATGTCAGTGATTGTTCGCACTCCATCTGGAAAGT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp TCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCATATACCAACACCAACGTaGGCTGTCTGTATCATGCTG +
Preference number: 4 (lower is better)
Translates to: SVSWYHMLLSLQTVKRFHIPTPT*AVCIML
Trigger: CAGCATGATACAGACAGCGCACGTTGGTGTTGGTAT...ATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp GGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTTTCGTGGTATCATATaGTCTTATCACTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: GADFVARIQSGTSSRGSSFRGII*SYHFRL
Trigger: CAGTCTGAAGTGATAAGAGCATATGATACCACGAAA...AGAAGAACCACGTGAACTTGTACCGCTCTGAATCCTTGCAACAAAATCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGAATTGGTTAGCAGACTaGGGTGACAACCTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKNWLAD*GDNLVA
Trigger: AGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACAACTGTGTTAGCATTTaGCAGAGTCCCTATAAGGAA +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHNCVSI*QSPYKE
Trigger: TTCCTTATAGGGACTCTGGCAAATGCTAACACAGTT...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAGTTTTCTGTAGTAGCTaGCTTCCAAGGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTVFCSS*LPRLPC
Trigger: ACAGGGCAGCCTTGGAAGGCAGCTACTACAGAAAAC...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CAGGAGCCAGAAATGTCCACCAAAACCAGCTTATCTCTCGGCATTTACATAAACAGAAGGAATTCTTGGTaGAGAATTGCAAAGACCTCT +
Preference number: 4 (lower is better)
Translates to: QEPEMSTKTSLSLGIYINRRNSW*RIAKTS
Trigger: AGAGGTCTTTGCAATTCTGCACCAAGAATTCCTTCT...GTTTATGTAAATGCCGAGAGATAAGCTGGTTTTGGTGGACATTTCTGGCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR GCA 90 bp ATGAATCAAAAGGCTGGAAAAGGTAGTGGATTCCAACACTGCTTGCAGCAGGAGCACTGTAAACAGAGATaGCTTTCCTGGATAATTTCA +
Preference number: 4 (lower is better)
Translates to: MNQKAGKGSGFQHCLQQEHCKQR*LSWIIS
Trigger: TGAAATTATCCAGGAAAGGCATCTCTGTTTACAGTG...CTCCTGCTGCAAGCAGTGTTGGAATCCACTACCTTTTCCAGCCTTTTGATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTAATTCTGCATCAGCTTaGTGTCATGTCCAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFNSASA*CHVQCR
Trigger: TCTACACTGGACATGACACCAAGCTGATGCAGAATT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAGCCTTCGATTCCAAATaGCTGAGCCCACAGAACAGA +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGAFDSK*LSPQNR
Trigger: TCTGTTCTGTGGGCTCAGCCATTTGGAATCGAAGGC...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp ACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAACACACAGTTATCACCAAAGTACAACTGCTCCTaGGTCTTGAGATTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TMSNMMSPIQLSNTQLSPKYNCS*VLRFCL
Trigger: GAGGCAAAATCTCAAGACCCAGGAGCAGTTGTACTT...TGGTGATAACTGTGTGTTTGAAAGCTGGATTGGAGACATCATATTGGACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCACTTCATGGACCAGACTaGAATTGGTTAGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSLHGPD*NWLADC
Trigger: GCAGTCTGCTAACCAATTCCAGTCTGGTCCATGAAG...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTCAAACAGGAAGGGCTTaGGAAGTAAAGTATGTAAAC +
Preference number: 4 (lower is better)
Translates to: DSERYKFTWFFLKTFLSSQTGRA*EVKYVN
Trigger: GTTTACATACTTTACTTCCCAAGCCCTTCCTGTTTG...ACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTACAAAGTGTTTCTCTaGAGGGGTGCATTTCACTCT +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSYKVFL*RGAFHS
Trigger: AGAGTGAAATGCACCCCTCCAGAGAAACACTTTGTA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTCAGTTTCAGCAGGAATaGTTTTTCAGGGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFQFQQE*FFRELK
Trigger: TTTCAGCTCCCTGAAAAACCATTCCTGCTGAAACTG...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAGCCACCTTTTCCCAGTaGACAATTTCCCAAGCACCA +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTATFSQ*TISQAP
Trigger: TGGTGCTTGGGAAATTGTCCACTGGGAAAAGGTGGC...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381668.9
CDS-3UTR CCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGACTGATGAGATCTGCTaGGAGATGTTCCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKTDEIC*EMFPIG
Trigger: ACCAATGGGGAACATCTCCCAGCAGATCTCATCAGT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381668.9
CDS-3UTR CCA 90 bp CATCAAGCCTTATGTTTCCAACAAAATCGTAGAGATGTCTGTTTGGACTTTCACGCTCACTTTTCCCAGTaGACAATTTCCCAAGCACCA +
Preference number: 4 (lower is better)
Translates to: HQALCFQQNRRDVCLDFHAHFSQ*TISQAP
Trigger: TGGTGCTTGGGAAATTGTCCACTGGGAAAAGTGAGC...GTGAAAGTCCAAACAGACATCTCTACGATTTTGTTGGAAACATAAGGCTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR TCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCAACTGTCAACGTCTTTaGTATCTGATGTTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSNCQRL*YLMLLV
Trigger: TACCAGCAACATCAGATATCAAAGACGTTGACAGTT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTCACCATAGTTTAGATTaGGATACCAGTCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFHHSLD*DTSLFQ
Trigger: CTGGAAAAGACTGGTATCTCAATCTAAACTATGGTG...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATTCTTCCTGCCCCAGTaGATCTATAATCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGFFLPQ*IYNHRV
Trigger: GACTCGGTGATTATAGATTCACTGGGGCAGGAAGAA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACACTGAAAGTCGCTCTCTaGAATCTCAGCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTLKVAL*NLSHSK
Trigger: TTTGCTGTGGCTGAGATTTCAGAGAGCGACTTTCAG...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAAACTCTCTTCGAGTTTaGGTAGCCTGTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTNSLRV*VACSAQ
Trigger: CTGTGCAGAACAGGCTACTCAAACTCGAAGAGAGTT...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACAGAAAACCTTGGTGTTaGAGTCCAGGGCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNRKPWC*SPGHSE
Trigger: CTCAGAATGCCCTGGACTTCAACACCAAGGTTTTCT...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAACACACAGTTATCACCAAATGCAGTACCATACTaGAGGGCTTTTAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: TMSNMMSPIQLSNTQLSPNAVPY*RAFSGN
Trigger: GTTTCCACTAAAAGCCCTTCAGTATGGTACTGCATT...TGGTGATAACTGTGTGTTTGAAAGCTGGATTGGAGACATCATATTGGACATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAAAAAGACTCCAGAACTaGACAACATGGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTKRLQN*TTWLPL
Trigger: GAGAGGCAGCCATGTTGTTCAGTTCTGGAGTCTTTT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAGAGATGCCACAGGGATaGATAACAAGCCCATCCAAA +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTEMPQG*ITSPSK
Trigger: TTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTC...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTTTGCCTCCAGCTCCTaGACTTCATCGACCAATGTT +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFFASSS*TSSTNV
Trigger: AACATTGGTCGATGAAGTTCAGGAGCTGGAGGCAAA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACATTTGCCTCCAGCTCCTaGACTTCATCGACCAATGTT +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTFASSS*TSSTNV
Trigger: AACATTGGTCGATGAAGTTCAGGAGCTGGAGGCAAA...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAGTACAGCCAATAAACTaGCAGTCAGTTACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGVQPIN*QSVTAP
Trigger: TGGGGCTGTAACTGACTGTCAGTTTATTGGCTGTAC...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCTGTTTCAGCATATCCTaGAATCTAAGTCTGGATACC +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSCFSIS*NLSLDT
Trigger: GGTATCCAGACTTAGATTTCAGGATATGCTGAAACA...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTTTCACAAAAGGCCAATaGCACATAACACTGCATAGA +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFFTKGQ*HITLHR
Trigger: TCTATGCAGTGTTATGTGTCATTGGCCTTTTGTGAA...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp AGCCGCATAAGTGGCCAGTGCTTACACAGATACTTTTTACATTATTGTTGGAATCTTTACCACCCAAAATaGACAGTCCTTGCCACATCA +
Preference number: 4 (lower is better)
Translates to: SRISGQCLHRYFLHYCWNLYHPK*TVLATS
Trigger: TGATGTGGCAAGGACTGTTCATTTTGGGTGGTAAAG...ATTCCAACAATAATGTAAAAAGTATCTGTGTAAGCACTGGCCACTTATGCGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCTGCTGTGTGACAGACTaGCATCATTGTAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSCCVTD*HHCKKF
Trigger: GAATTTCTTACAATGATGGCAGTCTGTCACACAGCA...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAATTCAATTGCTTGGCTaGTCTGACCAATGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTIQLLG*SDQCSL
Trigger: GAGGGAGCATTGGTCAGAGCAGCCAAGCAATTGAAT...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAATTCAATTGCTTGGCTaGTCTGACCAATGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGIQLLG*SDQCSL
Trigger: GAGGGAGCATTGGTCAGAGCAGCCAAGCAATTGAAT...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACTGCTCCATCACCGATTaGAAGCGTTACGACTTTGAC +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNCSITD*KRYDFD
Trigger: GTCAAAGTCGTAACGCTTGCAATCGGTGATGGAGCA...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACATGCTCCATCACCGATTaGAAGCGTTACGACTTTGAC +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTCSITD*KRYDFD
Trigger: GTCAAAGTCGTAACGCTTGCAATCGGTGATGGAGCA...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCTTTTCCAAGTACAACTaGTCCTGGGTCTTGAGATTT +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSFSKYN*SWVLRF
Trigger: AAATCTCAAGACCCAGGAGCAGTTGTACTTGGAAAA...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTTTCGTGGTATCATATaGTCTTATCACTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHFRGII*SYHFRL
Trigger: CAGTCTGAAGTGATAAGAGCATATGATACCACGAAA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCAACTGTGTTAGCATTTaGCAGAGTCCCTATAAGGAA +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSNCVSI*QSPYKE
Trigger: TTCCTTATAGGGACTCTGGCAAATGCTAACACAGTT...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAGCTGCCTTCCAAGGCTaGCCTGTTTTTCTTAACCTA +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGAAFQG*PVFLNL
Trigger: TAGGTTAAGAAAAACAGGGCAGCCTTGGAAGGCAGC...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACACAGACTGATGAGATCTaGTGGGAGATGTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTQTDEI*WEMFPI
Trigger: AATGGGGAACATCTCCCAGCAGATCTCATCAGTCTG...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381668.9
CDS-3UTR CCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAAAGTACAACTGCTCCTaGGTCTTGAGATTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSKYNCS*VLRFCL
Trigger: GAGGCAAAATCTCAAGACCCAGGAGCAGTTGTACTT...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCTTTAAGAAAGCCCTCTaGCAAGATACCAGGTCATTT +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSFKKAL*QDTRSF
Trigger: AAATGACCTGGTATCTTGCCAGAGGGCTTTCTTAAA...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTTTGCAACAGAAGCTTTaGAAATCCCACGTAAATACG +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFLQQKL*KSHVNT
Trigger: CGTATTTACGTGGGATTTCCAAAGCTTCTGTTGCAA...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCATCTCTAGTGGGAACTaGAACACAGGACAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFISSGN*NTGQKP
Trigger: GGGCTTTTGTCCTGTGTTCCAGTTCCCACTAGAGAT...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp AGCCGCATAAGTGGCCAGTGCTTACACAGATACTTTTTACATTATTGTTGGAATTTGAAGGTGTTTATGTaGTCCCAGAAGCCGCATAAG +
Preference number: 4 (lower is better)
Translates to: SRISGQCLHRYFLHYCWNLKVFM*SQKPHK
Trigger: CTTATGCGGCTTCTGGGACCACATAAACACCTTCAA...ATTCCAACAATAATGTAAAAAGTATCTGTGTAAGCACTGGCCACTTATGCGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR TCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCAGGTTAAGGCATATTTaGGGGTTTTCCCATCAATTA +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSRLRHI*GFSHQL
Trigger: TAATTGATGGGAAAACCCTCAAATATGCCTTAACCT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTAAGTCCAGGGCATTCTaGGATGTTTTGTATAATTCA +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFKSRAF*DVLYNS
Trigger: TGAATTATACAAAACATCTCAGAATGCCCTGGACTT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGGAACCATGTCCAATATaGTGTCTCCAATCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKEPCPI*CLQSSF
Trigger: AAAGCTGGATTGGAGACATCATATTGGACATGGTTC...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGAGATGTGTTGATTCATaGCTCTCTCAATCTGTACCC +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKRCVDS*LSQSVP
Trigger: GGGTACAGATTGAGAGAGTCATGAATCAACACATCT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTTCATCTCCAAACTGTaGGTTCTGCCATTCATCAGG +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFFISKL*VLPFIR
Trigger: CCTGATGAATGGCAGAACTCACAGTTTGGAGATGAA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381668.9
CDS-3UTR TCA 90 bp GTTTATCAAATAGAAAGGAGATTAAAGCAGACACATGCCACATTACCCAAATTGAACACAACAGTGCAGTaGAGTAATTCGCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: VYQIERRLKQTHATLPKLNTTVQ*SNSHSP
Trigger: AGGGCTGTGCGAATTACTTCACTGCACTGTTGTGTT...CAATTTGGGTAATGTGGCATGTGTCTGCTTTAATCTCCTTTCTATTTGATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTTTCACACTCAATTCTaGCAGAAATCCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSFHTQF*QKSSSN
Trigger: GTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAAAGTCAGGCATaGAGATCTTACAGCGGAACT +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTLESQA*RSYSGT
Trigger: AGTTCCGCTGTAAGATCTGCATGCCTGACTTTCCAA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACCATCACTCAATCTACTaGATTAGCCAGATTTTTAGA +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHHHSIY*ISQIFR
Trigger: TCTAAAAATCTGGCTAATGCAGTAGATTGAGTGATG...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCCAGGACAAAAGCCCATaGATTTATCTGACATGTTAT +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSQDKSP*IYLTCY
Trigger: ATAACATGTCAGATAAATGCATGGGCTTTTGTCCTG...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACGTTTCTCTGGAGGGGTaGATTTCACTCTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNVSLEG*ISLLLS
Trigger: AGAAAGCAAGAGTGAAATGCACCCCTCCAGAGAAAC...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGTTTCTCTGGAGGGGTaGATTTCACTCTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTVSLEG*ISLLLS
Trigger: AGAAAGCAAGAGTGAAATGCACCCCTCCAGAGAAAC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTTTCTGCTCACATCTTTaGAAGAACAGATTTACCTGT +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFFCSHL*KNRFTC
Trigger: ACAGGTAAATCTGTTCTTGCAAAGATGTGAGCAGAA...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTTGCAGTTTAAAACATaGACATTCACAAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHLQFKT*TFTKGQ
Trigger: TTGGCCTTTTGTGAATGTGCATGTTTTAAACTGCAA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp CACATAAGCAGCTTTCATTATTCAATATCTATGCAGCATCGGCAGAGGATGGGTATTAAAGCAGACACATaGCACATTACCCAAATTGAG +
Preference number: 4 (lower is better)
Translates to: HISSFHYSISMQHRQRMGIKADT*HITQIE
Trigger: CTCAATTTGGGTAATGTGGCATGTGTCTGCTTTAAT...ACCCATCCTCTGCCGATGCTGCATAGATATTGAATAATGAAAGCTGCTTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTTCAATGTAGCACATaGCTTGGGGCTCACTTGATG +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTFQCST*LGAHLM
Trigger: CATCAAGTGAGCCCCAAGCCATGTGCTACATTGAAA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264449.14
CDS-3UTR CCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCGTAGAGATGTCTGTTTaGACTTTCACACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSVEMSV*TFTLNS
Trigger: AGAATTGAGTGTGAAAGTCCAAACAGACATCTCTAC...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCTCATTAGCGTTTCTATaGTTTCAGGCACTTGATCTT +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSSLAFL*FQALDL
Trigger: AAGATCAAGTGCCTGAAACCATAGAAACGCTAATGA...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATCGCTATGTGGCTGAACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAAAGTATAAGATGCACTTaGAGACTCTGTTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: IAMWLNHVQYDVSNPAFKSIRCT*RLCYSS
Trigger: GGAACTATAACAGAGTCTCCAAGTGCATCTTATACT...TTTGAAAGCTGGATTGGAGACATCATATTGGACATGGTTCAGCCACATAGCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR CCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACACCCCATATCGCTATGTaGCTGAACCATGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTPHIAM*LNHVQY
Trigger: ATATTGGACATGGTTCAGCCACATAGCGATATGGGG...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACAAAATCCAAAAGAGATaGTGTTACAGTACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHKIQKR*CYSTVA
Trigger: TGCAACTGTACTGTAACACCATCTCTTTTGGATTTT...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCAATCACTCTTACATTTaGAAAGTCAGGCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSNHSYI*KVRHAD
Trigger: ATCTGCATGCCTGACTTTCCAAATGTAAGAGTGATT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTAATCACTCTTACATTTaGAAAGTCAGGCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFNHSYI*KVRHAD
Trigger: ATCTGCATGCCTGACTTTCCAAATGTAAGAGTGATT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GTTTATCAAATAGAAAGGAGATTAAAGCAGACACATGCCACATTACCCAAATTGAGCATCGGCAGAGGATaGGTGCTTATTCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VYQIERRLKQTHATLPKLSIGRG*VLILSA
Trigger: AGCAGAAAGAATAAGCACCCATCCTCTGCCGATGCT...CAATTTGGGTAATGTGGCATGTGTCTGCTTTAATCTCCTTTCTATTTGATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510289.1
3UTR CAA 72 bp ATTCTGCCAGAAATCCTCATCAAACTGTCAACGTCTTaGATATCTGATGTTGCTGGTAAGCCCTGTCTAATT +
Preference number: 4 (lower is better)
Translates to: ILPEILIKLSTS*ISDVAGKPCLI
Trigger: AATTAGACAGGGCTTACCAGCAACATCAGATATCAAAGACGTTGACAGTTTGATGAGGATTTCTGGCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR TCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAAACTGTCAACGTCTTTaGTATCTGATGTTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSNCQRL*YLMLLV
Trigger: TACCAGCAACATCAGATATCAAAGACGTTGACAGTT...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACATGTGTATTTCTCAACTaGGCTCCTCGAAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTCVFLN*APRRRI
Trigger: GATTCTTCTTCGAGGAGCTCAGTTGAGAAATACACA...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGCACCATAGTTTAGATTaGGATACCAGTCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKHHSLD*DTSLFQ
Trigger: CTGGAAAAGACTGGTATCTCAATCTAAACTATGGTG...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAGTTGCTCCAAGTAGCTaGAGATTCTTTTCAATCAAC +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSVAPSS*RFFSIN
Trigger: GTTGATTGAAAAGAATCTTCAGCTACTTGGAGCAAC...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACAATGCAGTACCATACTaGAGGGCTTTTAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNNAVPY*RAFSGN
Trigger: GTTTCCACTAAAAGCCCTTCAGTATGGTACTGCATT...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACGAACCATGTCCAATATaGTGTCTCCAATCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNEPCPI*CLQSSF
Trigger: AAAGCTGGATTGGAGACATCATATTGGACATGGTTC...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAATTCCATTTTCATCTTaGGAGAACGCATACCCATGG +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTIPFSS*ENAYPW
Trigger: CCATGGGTATGCGTTCTCTCAAGATGAAAATGGAAT...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTTTGCTCAGGAAGGTaGGTCAGTTCCTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTFCSGR*VSSLRM
Trigger: CATTCTTAAGGAACTGACTCACCTTCCTGAGCAAAA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAAGATGTGTTGATTCATaGCTCTCTCAATCTGTACCC +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTRCVDS*LSQSVP
Trigger: GGGTACAGATTGAGAGAGTCATGAATCAACACATCT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAGGGAGATTTATTTGCTaGGAAGTTTTGGGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSGRFIC*EVLGAL
Trigger: TAAAGCTCCCAAAACTTCTCAGCAAATAAATCTCCC...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTTGTTTCTTGTTCACTaGATTATCAGCTTTATGTCG +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSLFLVH*IISFMS
Trigger: CGACATAAAGCTGATAATGCAGTGAACAAGAAACAA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCCCATTTCTCAAAACTTaGGTTTGTTTCTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSPFLKT*VCFLFT
Trigger: AGTGAACAAGAAACAAACGCAAGTTTTGAGAAATGG...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTCCATTTCTCAAAACTTaGGTTTGTTTCTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFPFLKT*VCFLFT
Trigger: AGTGAACAAGAAACAAACGCAAGTTTTGAGAAATGG...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAATCGTAGAGATGTCTGTTCCATTTCTCAAAACTTaGGTTTGTTTCTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: GAMSIKPYVSNKIVEMSVPFLKT*VCFLFT
Trigger: AGTGAACAAGAAACAAACGCAAGTTTTGAGAAATGG...AACAGACATCTCTACGATTTTGTTGGAAACATAAGGCTTGATGGACATGGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR GCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGTGCTGTGTGACAGACTaGCATCATTGTAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKCCVTD*HHCKKF
Trigger: GAATTTCTTACAATGATGGCAGTCTGTCACACAGCA...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAACTTTCCAGATGGAGTaGGAACAATCACTGACATTC +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTTFQME*EQSLTF
Trigger: GAATGTCAGTGATTGTTCGCACTCCATCTGGAAAGT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATTTCCCATTTCCAAATaGAGTACCATACTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGFPISK*STILKG
Trigger: GCCCTTCAGTATGGTACTGCATTTGGAAATGGGAAA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGTTTTCCAAGTACAACTaGTCCTGGGTCTTGAGATTT +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKFSKYN*SWVLRF
Trigger: AAATCTCAAGACCCAGGAGCAGTTGTACTTGGAAAA...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCTTTATATTAAAATTCTaGAGAAGGGTGCCACTGATG +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSFILKF*RRVPLM
Trigger: CATCAGTGGCACCCTTCTGCAGAATTTTAATATAAA...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCCATTTAGAAAGTCCATaGTCAATACCACTGTATACT +
Preference number: 4 (lower is better)
Translates to: YIKILQKGATDEVSANRSHLESP*SIPLYT
Trigger: AGTATACAGTGGTATTGAGCATGGACTTTCTAAATG...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCCTATCAAAGGGCAACTaGACAAAAATAAACACGATT +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSLSKGN*TKINTI
Trigger: AATCGTGTTTATTTTTGTGCAGTTGCCCTTTGATAG...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTTTGTCAGCTGGGGCTaGTTGATGAAAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFFVSWG*LMKIVL
Trigger: AAGGACTATTTTCATCAACCAGCCCCAGCTGACAAA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp CTATTTCCAGATTCTTATGAATATTTCTCTATGGGAGAGAAGATGGGGAAACAGTTTGTCAGCTGGGGCTaGTTGATGAAAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LFPDSYEYFSMGEKMGKQFVSWG*LMKIVL
Trigger: AAGGACTATTTTCATCAACCAGCCCCAGCTGACAAA...CTGTTTCCCCATCTTCTCTCCCATAGAGAAATATTCATAAGAATCTGGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp GGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAATCGTAGAGATGTCTGTTTTTCACCATCTAAGTTaGATGTTTCAATGTAGCACA +
Preference number: 4 (lower is better)
Translates to: GAMSIKPYVSNKIVEMSVFHHLS*MFQCST
Trigger: TGTGCTACATTGAAACATCCAACTTAGATGGTGAAA...AACAGACATCTCTACGATTTTGTTGGAAACATAAGGCTTGATGGACATGGCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR CCA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCAATATGTATTTAACCTaGCCAAGTTCCTCATTCAGA +
Preference number: 4 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSNMYLT*PSSSFR
Trigger: TCTGAATGAGGAACTTGGCCAGGTTAAATACATATT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp ACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAACACACAGTTATCACCAAGTATAAGATGCACTTaGAGACTCTGTTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: TMSNMMSPIQLSNTQLSPSIRCT*RLCYSS
Trigger: GGAACTATAACAGAGTCTCCAAGTGCATCTTATACT...TGGTGATAACTGTGTGTTTGAAAGCTGGATTGGAGACATCATATTGGACATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR CCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACACGGTACAAGTTCACGTaGTTCTTCTTAAAGACGTTC +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTRYKFT*FFLKTF
Trigger: GAACGTCTTTAAGAAGAACCACGTGAACTTGTACCG...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACATACCTTTCCTCTTCATaGACCAGACTGGAATTGGTT +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTYLSSS*TRLELV
Trigger: AACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTA...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATACCTTTCCTCTTCATaGACCAGACTGGAATTGGTT +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGYLSSS*TRLELV
Trigger: AACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGACAGTTTCAGCAGGAATaGTTTTTCAGGGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGQFQQE*FFRELK
Trigger: TTTCAGCTCCCTGAAAAACCATTCCTGCTGAAACTG...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp CTATTTCCAGATTCTTATGAATATTTCTCTATGGGAGAGAAGATGGGGAAACAGACCAGAAGGAATTCTTaGTGCAGAATTGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: LFPDSYEYFSMGEKMGKQTRRNS*CRIAKT
Trigger: GGTCTTTGCAATTCTGCACCAAGAATTCCTTCTGGT...CTGTTTCCCCATCTTCTCTCCCATAGAGAAATATTCATAAGAATCTGGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR TCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGCAATCTATTACTTTCTaGCTAGCATTCATTTCCCGA +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKQSITF*LAFISR
Trigger: TCGGGAAATGAATGCTAGTCAGAAAGTAATAGATTG...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAGGGAGATTTATTTGCTaGGAAGTTTTGGGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTGRFIC*EVLGAL
Trigger: TAAAGCTCCCAAAACTTCTCAGCAAATAAATCTCCC...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATTCACAAAAGGCCAATaGCACATAACACTGCATAGA +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGFTKGQ*HITLHR
Trigger: TCTATGCAGTGTTATGTGTCATTGGCCTTTTGTGAA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTTCACAAAAGGCCAATaGCACATAACACTGCATAGA +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFFTKGQ*HITLHR
Trigger: TCTATGCAGTGTTATGTGTCATTGGCCTTTTGTGAA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCACATCAGGTATTTGCTaGAGCAGTGCAATAAAGAGA +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFTSGIC*SSAIKR
Trigger: TCTCTTTATTGCACTGCTGCAGCAAATACCTGATGT...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAACATCAGGTATTTGCTaGAGCAGTGCAATAAAGAGA +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTTSGIC*SSAIKR
Trigger: TCTCTTTATTGCACTGCTGCAGCAAATACCTGATGT...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAACACACAGTTATCACCACTATCAAAGGGCAACTaGACAAAAATAAACACGATT +
Preference number: 4 (lower is better)
Translates to: TMSNMMSPIQLSNTQLSPLSKGN*TKINTI
Trigger: AATCGTGTTTATTTTTGTGCAGTTGCCCTTTGATAG...TGGTGATAACTGTGTGTTTGAAAGCTGGATTGGAGACATCATATTGGACATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR GCA 90 bp GATTCTTATGAATATTTCTCTATGGGAGAGAAGATGGGGAAACAGCCTATTCACATGAAAACACAACAGTaGAGTGAAGTAATTCGCACA +
Preference number: 4 (lower is better)
Translates to: DSYEYFSMGEKMGKQPIHMKTQQ*SEVIRT
Trigger: TGTGCGAATTACTTCACTGCACTGTTGTGTTTTCAT...GTGAATAGGCTGTTTCCCCATCTTCTCTCCCATAGAGAAATATTCATAAGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGGTAGAGATGTCTGTTTaGACTTTCACACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: VSANRSSSSLLTELNTTKVEMSV*TFTLNS
Trigger: AGAATTGAGTGTGAAAGTCCAAACAGACATCTCTAC...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp AAGCCTTATGTTTCCAACAAAATCGTAGAGATGTCTGTTTGGACTTTCACACTCGTAGAGATGTCTGTTTaGACTTTCACACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: KPYVSNKIVEMSVWTFTLVEMSV*TFTLNS
Trigger: AGAATTGAGTGTGAAAGTCCAAACAGACATCTCTAC...GAGTGTGAAAGTCCAAACAGACATCTCTACGATTTTGTTGGAAACATAAGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR CCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGTAATTTATCCTCAATaGCTGTTGCTCCAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTVIYPQ*LLLQVA
Trigger: AGCTACTTGGAGCAACAGCCATTGAGGATAAATTAC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACGTAATTTATCCTCAATaGCTGTTGCTCCAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNVIYPQ*LLLQVA
Trigger: AGCTACTTGGAGCAACAGCCATTGAGGATAAATTAC...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACTTTAAGAAAGCCCTCTaGCAAGATACCAGGTCATTT +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNFKKAL*QDTRSF
Trigger: AAATGACCTGGTATCTTGCCAGAGGGCTTTCTTAAA...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATCAAAAACAGGACGATaGGACAAAGAGGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGSKTGR*DKEAQI
Trigger: AATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCATGGTTTCAGGCACTTaGTCTTGTAATTTATCCTCA +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFMVSGT*SCNLSS
Trigger: TGAGGATAAATTACAAGATCAAGTGCCTGAAACCAT...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAAGGTTAAGGCATATTTaGGGGTTTTCCCATCAATTA +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTRLRHI*GFSHQL
Trigger: TAATTGATGGGAAAACCCTCAAATATGCCTTAACCT...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR TCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCAAGTCCAGGGCATTCTaGGATGTTTTGTATAATTCA +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFKSRAF*DVLYNS
Trigger: TGAATTATACAAAACATCTCAGAATGCCCTGGACTT...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR TCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATATCACTTCAGACTGTaGAACGATTCCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTYHFRL*NDSIFI
Trigger: GATGAAAATGGAATCGTTTCACAGTCTGAAGTGATA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ACTTTCACACTCAATTCTGCCAGAAATCCTCATCAAACTGTCAACGTCTTTGATTTGTTTCTTGTTCACTaGATTATCAGCTTTATGTCG +
Preference number: 4 (lower is better)
Translates to: TFTLNSARNPHQTVNVFDLFLVH*IISFMS
Trigger: CGACATAAAGCTGATAATGCAGTGAACAAGAAACAA...ATCAAAGACGTTGACAGTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR GCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACTTTCACACTCAATTCTaGCAGAAATCCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNFHTQF*QKSSSN
Trigger: GTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAA...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGACTCATCTGGAGATGCTaGTTGATAAATAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGLIWRC*LINNLV
Trigger: GACAAGATTATTTATCAAGCAGCATCTCCAGATGAG...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCGTGTTACAGTACAGTTaGACAGTGCTTATGTCTATA +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFVLQYS*TVLMSI
Trigger: TATAGACATAAGCACTGTGCAACTGTACTGTAACAC...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCACATCACTCAATCTACTaGATTAGCCAGATTTTTAGA +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSHHSIY*ISQIFR
Trigger: TCTAAAAATCTGGCTAATGCAGTAGATTGAGTGATG...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGACAGGACAAAAGCCCATaGATTTATCTGACATGTTAT +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGQDKSP*IYLTCY
Trigger: ATAACATGTCAGATAAATGCATGGGCTTTTGTCCTG...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCGTACAGTGCACGCAATaGAAAACAAATTATCATGTG +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFVQCTQ*KTNYHV
Trigger: CACATGATAATTTGTTTTGCATTGCGTGCACTGTAC...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAGTACAGTGCACGCAATaGAAAACAAATTATCATGTG +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGVQCTQ*KTNYHV
Trigger: CACATGATAATTTGTTTTGCATTGCGTGCACTGTAC...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAGTAAGTGTTGTACAGTaGACGCAATGCAAAACAAAT +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGVSVVQ*TQCKTN
Trigger: ATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGTAAGTGTTGTACAGTaGACGCAATGCAAAACAAAT +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTVSVVQ*TQCKTN
Trigger: ATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATTCTGCTCACATCTTTaGAAGAACAGATTTACCTGT +
Preference number: 4 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGFCSHL*KNRFTC
Trigger: ACAGGTAAATCTGTTCTTGCAAAGATGTGAGCAGAA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACAATACTCTCCACTCATaGAGCTTCACAATTTCTACA +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNNTLHS*SFTIST
Trigger: TGTAGAAATTGTGAAGCTGCATGAGTGGAGAGTATT...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAAATACTCTCCACTCATaGAGCTTCACAATTTCTACA +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTNTLHS*SFTIST
Trigger: TGTAGAAATTGTGAAGCTGCATGAGTGGAGAGTATT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCATTGCAGTTTAAAACATaGACATTCACAAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSLQFKT*TFTKGQ
Trigger: TTGGCCTTTTGTGAATGTGCATGTTTTAAACTGCAA...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GTTTATCAAATAGAAAGGAGATTAAAGCAGACACATGCCACATTACCCAAATTGCGCATAAGTGGCCAGTaGTTACACAGATACTTTTTA +
Preference number: 4 (lower is better)
Translates to: VYQIERRLKQTHATLPKLRISGQ*LHRYFL
Trigger: TAAAAAGTATCTGTGTAAGCACTGGCCACTTATGCG...CAATTTGGGTAATGTGGCATGTGTCTGCTTTAATCTCCTTTCTATTTGATAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CCA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCATTTCACCATCTAAGTTaGATGTTTCAATGTAGCACA +
Preference number: 4 (lower is better)
Translates to: KAKGATSPILVANALKYSFHHLS*MFQCST
Trigger: TGTGCTACATTGAAACATCCAACTTAGATGGTGAAA...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATCATTAGCGTTTCTATaGTTTCAGGCACTTGATCTT +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTSLAFL*FQALDL
Trigger: AAGATCAAGTGCCTGAAACCATAGAAACGCTAATGA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACAGTATAAGATGCACTTaGAGACTCTGTTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNSIRCT*RLCYSS
Trigger: GGAACTATAACAGAGTCTCCAAGTGCATCTTATACT...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTTGTTTCTTGTTCACTaGATTATCAGCTTTATGTCG +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFLFLVH*IISFMS
Trigger: CGACATAAAGCTGATAATGCAGTGAACAAGAAACAA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAAAAACAAAATTCAATTaGTTGGCTGCTCTGACCAAT +
Preference number: 4 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTKTKFN*LAALTN
Trigger: ATTGGTCAGAGCAGCCAAGCAATTGAATTTTGTTTT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR GCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCCATTTAGAAAGTCCATaGTCAATACCACTGTATACT +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFHLESP*SIPLYT
Trigger: AGTATACAGTGGTATTGAGCATGGACTTTCTAAATG...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR GCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGCAGTTTAAAACATaGACATTCACAAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTLQFKT*TFTKGQ
Trigger: TTGGCCTTTTGTGAATGTGCATGTTTTAAACTGCAA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAAACAGAATAACTGAGTaGAAGAGGCCATTTAAACAA +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTNRITE*KRPFKQ
Trigger: TTGTTTAAATGGCCTCTTCCACTCAGTTATTCTGTT...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCAATTCATTTCCCCTCTaGAAATTAAAGAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFNSFPL*KLKRNH
Trigger: GTGATTCCTCTTTAATTTCCAGAGGGGAAATGAATT...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAAATTCATTTCCCCTCTaGAAATTAAAGAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTNSFPL*KLKRNH
Trigger: GTGATTCCTCTTTAATTTCCAGAGGGGAAATGAATT...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CCA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACGAACAGATTTACCTGTaGAAAGTTGCTGTTAATTCA +
Preference number: 4 (lower is better)
Translates to: IKIYSNSHALAWITLNMNEQIYL*KVAVNS
Trigger: TGAATTAACAGCAACTTTCCACAGGTAAATCTGTTC...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
3UTR CAA 72 bp GAAATAAACATCAAGATTTACAGCAATAGCCATGCATaGGCCTGGATCACTTTAAATATGAACTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: EINIKIYSNSHA*AWITLNMNSCK
Trigger: TTTGCATGAGTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGATGTTTATTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS GCA 90 bp CTCAGCTGCAGCCTGGGCCGCGCCGCCGCCCACCTAGGGCAGAGCTaGCGCCGGGCGCGGCCCCCGCACGCCGACAGGAGGAGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: LSCSLGRAAAHLGQS*RRARPPHADRRRRK
Trigger: CTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGGCGGCAGCTCTGCCCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS GCA 90 bp CGGACTCTGCACCTGTCACGGCGTGGTACACGCGGGAGACCCGGCTaGGCCGCGCAGAGCGCTCAGCTGCAGCCTGGGCCGCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RTLHLSRRGTRGRPG*AAQSAQLQPGPRRR
Trigger: GCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTGCAGAGTCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS GCA 90 bp TGGGCATCGCGGCGGCGGCTGCAGGTGGGTCCTCAGCCCGGACTCTaGACCTGTCACGGCGTGGTACACGCGGGAGACCCGGCTGCGCCG +
Preference number: 5 (lower is better)
Translates to: WASRRRLQVGPQPGL*TCHGVVHAGDPAAP
Trigger: CGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS CCA 90 bp AACCTTCGGCGCGCGAGCGGATCTCCGACACGGTCCTCCGCATGGTaGGCATCGCGGCGGCGGCTGCAGGTGGGTCCTCAGCCCGGACTC +
Preference number: 5 (lower is better)
Translates to: NLRRASGSPTRSSAW*ASRRRLQVGPQPGL
Trigger: GAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGGTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS GCA 90 bp GATCTCCGACACGGTCCTCCGCATGGTGGGCATCGCGGCGGCGGCTaGAGGTGGGTCCTCAGCCCGGACTCTGCACCTGTCACGGCGTGG +
Preference number: 5 (lower is better)
Translates to: DLRHGPPHGGHRGGG*RWVLSPDSAPVTAW
Trigger: CCACGCCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS CCA 90 bp CGACACGGTCCTCCGCATGGTGGGCATCGCGGCGGCGGCTGCAGGTaGGTCCTCAGCCCGGACTCTGCACCTGTCACGGCGTGGTACACG +
Preference number: 5 (lower is better)
Translates to: RHGPPHGGHRGGGCR*VLSPDSAPVTAWYT
Trigger: CGTGTACCACGCCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS CCA 90 bp CATAACCTTCGGCGCGCGAGCGGATCTCCGACACGGTCCTCCGCATaGTGGGCATCGCGGCGGCGGCTGCAGGTGGGTCCTCAGCCCGGA +
Preference number: 5 (lower is better)
Translates to: HNLRRASGSPTRSSA*WASRRRLQVGPQPG
Trigger: TCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGGTTATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS TCA 90 bp TGCGCCCTCTCGGTCAGGCTGCAGAGCAGGTGCAAATGTGTGAAATaGATTATCAACTCGGCAGAGACCCCAGTGTGCCCACAGGACCAC +
Preference number: 5 (lower is better)
Translates to: CALSVRLQSRCKCVK*IINSAETPVCPQDH
Trigger: GTGGTCCTGTGGGCACACTGGGGTCTCTGCCGAGTTGATAATTCATTTCACACATTTGCACCTGCTCTGCAGCCTGACCGAGAGGGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS TCA 90 bp GCAGTTGCGCCCTCTCGGTCAGGCTGCAGAGCAGGTGCAAATGTGTaGAATGAATTATCAACTCGGCAGAGACCCCAGTGTGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: AVAPSRSGCRAGANV*NELSTRQRPQCAHR
Trigger: CCTGTGGGCACACTGGGGTCTCTGCCGAGTTGATAATTCATTTCACACATTTGCACCTGCTCTGCAGCCTGACCGAGAGGGCGCAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS-3UTR CAA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAGACGTTCTTGAGCAGTaGCGCCCTCTCGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: PDWNWLADCGDNLVALLRDVLEQ*RPLGQA
Trigger: AGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTC...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCCAAGACGTTCTTGAGCAGTaGCGCCCTCTCGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: LTYQGPSEWQATEMSRFQDVLEQ*RPLGQA
Trigger: AGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTC...TTGGAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGGCCTGCAGGCCTTCATaGCCACTGATACCAACACCA +
Preference number: 5 (lower is better)
Translates to: GSHHNTGCATQDTGISSGACRPS*PLIPTP
Trigger: TGGTGTTGGTATCAGTGGCAATGAAGGCCTGCAGGC...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCGCCTGCAGGCCTTCATaGCCACTGATACCAACACCA +
Preference number: 5 (lower is better)
Translates to: LLTYQGPSEWQATEMSRFACRPS*PLIPTP
Trigger: TGGTGTTGGTATCAGTGGCAATGAAGGCCTGCAGGC...GAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR CAA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGACGTTCTTGAGCAGTaGCGCCCTCTCGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGDVLEQ*RPLGQA
Trigger: AGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCAACTGCTCCTGGGTCTaGAGATTTTGCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LLTYQGPSEWQATEMSRFNCSWV*RFCLQL
Trigger: GAGCTGGAGGCAAAATCTCAAGACCCAGGAGCAGTT...GAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTTGGCTTGGGGCTCACTaGATGAGAGAAGTACAGTGT +
Preference number: 5 (lower is better)
Translates to: GPDWNWLADCGDNLVALLWLGAH*MREVQC
Trigger: ACACTGTACTTCTCTCATCAAGTGAGCCCCAAGCCA...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264449.14
CDS-3UTR CAA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAAACTGCTCCTGGGTCTaGAGATTTTGCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PDWNWLADCGDNLVALLRNCSWV*RFCLQL
Trigger: GAGCTGGAGGCAAAATCTCAAGACCCAGGAGCAGTT...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS GCA 90 bp CGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTTaGGCCCTCTCGGTCAGGCTGCAGAGCAGGTGCAAATGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: RYKFTWFFLKTFLSS*ALSVRLQSRCKCVK
Trigger: TTTCACACATTTGCACCTGCTCTGCAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS-3UTR CAA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGATGGCAGTTTCTTGCTaGTCCCCTGTAAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGMAVSC*SPVRIQ
Trigger: CTGGATCCTTACAGGGGACAAGCAAGAAACTGCCAT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACAACTGCTCCTGGGTCTaGAGATTTTGCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADNCSWV*RFCLQL
Trigger: GAGCTGGAGGCAAAATCTCAAGACCCAGGAGCAGTT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGATGGAGCAGATTTTGTaGCAAGGATTCAGAGCGGTA +
Preference number: 5 (lower is better)
Translates to: GSHHNTGCATQDTGISSGMEQIL*QGFRAV
Trigger: TACCGCTCTGAATCCTTGCAACAAAATCTGCTCCAT...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTGCAAGCGTTACGACTTaGACTTGTTTCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: GPDWNWLADCGDNLVALLASVTT*TCFLTI
Trigger: GATGGTTAAGAAACAAGTCAAAGTCGTAACGCTTGC...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCGGTGTTACAGTACAGTaGCACAGTGCTTATGTCTAT +
Preference number: 5 (lower is better)
Translates to: LLTYQGPSEWQATEMSRFGVTVQ*HSAYVY
Trigger: ATAGACATAAGCACTGTGCAACTGTACTGTAACACC...GAATCTACTCATCTCTGTGGCCTGCCATTCCGATGGCCCCTGATATGTCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTCTTACACCTGTGGTCTaGCTAGATGTGTTGATTCAT +
Preference number: 5 (lower is better)
Translates to: GPDWNWLADCGDNLVALLLTPVV*LDVLIH
Trigger: ATGAATCAACACATCTAGCAAGACCACAGGTGTAAG...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGCAATAGCCATGCATaGGCCTGGATCACTTTAAAT +
Preference number: 5 (lower is better)
Translates to: GPDWNWLADCGDNLVALLSNSHA*AWITLN
Trigger: ATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TGCTCCCAGTGGAACGGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAATCAATGTAGCACATGGCTaGGGGCTCACTTTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: CSQWNGAMSIKPYVSNKINVAHG*GLTFPS
Trigger: ACTGGGAAAAGTGAGCCCCAAGCCATGTGCTACATT...GATTTTGTTGGAAACATAAGGCTTGATGGACATGGCACCGTTCCACTGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR CAA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGTTAATGGCAGTTTCTaGCTTGTCCCCTGTAAGGAT +
Preference number: 5 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGVNGSF*LVPCKD
Trigger: ATCCTTACAGGGGACAAGCAAGAAACTGCCATTAAC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp ATCGCTATGTGGCTGAACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAAGCCTGCAGGCCTTCATaGCCACTGATACCAACACCA +
Preference number: 5 (lower is better)
Translates to: IAMWLNHVQYDVSNPAFKACRPS*PLIPTP
Trigger: TGGTGTTGGTATCAGTGGCAATGAAGGCCTGCAGGC...TTTGAAAGCTGGATTGGAGACATCATATTGGACATGGTTCAGCCACATAGCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR CAA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTTTAAAAGCAGTCCTCTaGATAACCTTGTACACCACA +
Preference number: 5 (lower is better)
Translates to: GPDWNWLADCGDNLVALLLKAVL*ITLYTT
Trigger: TGTGGTGTACAAGGTTATCAAGAGGACTGCTTTTAA...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CGGGCCTCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCTTAAAGACGTTCTaGAGCAGTTGCGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: RASVSWYHMLLSLQTVKRFLKTF*SSCALS
Trigger: CGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAA...TCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGAGGCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp GGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTATTCTGCTCACATCTTaGCAAGAACAGATTTACCTG +
Preference number: 5 (lower is better)
Translates to: GPDWNWLADCGDNLVALLILLTS*QEQIYL
Trigger: CAGGTAAATCTGTTCTTGCAAAGATGTGAGCAGAAT...AAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CTTTGCAAGCATTTTCATTTTGACCTAACCAGCTCTGCTCTGCTGGCTGGTCTCGCCGGCTGTTTCAAATaGGGAGAATATTGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: LCKHFHFDLTSSALLAGLAGCFK*GEYCKG
Trigger: CCCTTTGCAATATTCTCCCAATTTGAAACAGCCGGC...GAGACCAGCCAGCAGAGCAGAGCTGGTTAGGTCAAAATGAAAATGCTTGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGTTTAGGGTAATTTCTTaGTATTTTGACGTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GSHHNTGCATQDTGISSGFRVIS*YFDVSA
Trigger: GGCAGAGACGTCAAAATACAAAGAAATTACCCTAAA...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACATGGCAGTTTCTTGCTaGTCCCCTGTAAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHMAVSC*SPVRIQ
Trigger: CTGGATCCTTACAGGGGACAAGCAAGAAACTGCCAT...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGAAGGTTAAGGCATATTaGAGGGTTTTCCCATCAATT +
Preference number: 5 (lower is better)
Translates to: GSHHNTGCATQDTGISSGKVKAY*RVFPSI
Trigger: AATTGATGGGAAAACCCTCAAATATGCCTTAACCTT...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGGGTGTTACAGTACAGTaGCACAGTGCTTATGTCTAT +
Preference number: 5 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGGVTVQ*HSAYVY
Trigger: ATAGACATAAGCACTGTGCAACTGTACTGTAACACC...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GGCAGTCACCATAACACTGGGTGTGCTACACAAGACACAGGCATCTCTAGTGGGCTTAAGAATGCTGGTTaGTTTCAGCATATCCTGAAA +
Preference number: 5 (lower is better)
Translates to: GSHHNTGCATQDTGISSGLKNAG*FQHILK
Trigger: TTTCAGGATATGCTGAAACAAACCAGCATTCTTAAG...CCCACTAGAGATGCCTGTGTCTTGTGTAGCACACCCAGTGTTATGGTGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGATGGGACTTCAGAATTTaGAAGACGATCTTAGACTCT +
Preference number: 5 (lower is better)
Translates to: PDWNWLADCGDNLVALLRWDFRI*KTILDS
Trigger: AGAGTCTAAGATCGTCTTCAAAATTCTGAAGTCCCA...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAATTCTGCTCACATCTTaGCAAGAACAGATTTACCTG +
Preference number: 5 (lower is better)
Translates to: PDWNWLADCGDNLVALLRILLTS*QEQIYL
Trigger: CAGGTAAATCTGTTCTTGCAAAGATGTGAGCAGAAT...TCTAAGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GCTTGCAGCAGGAGCCAGAAATGTCCACCAAAACCAGCTTATCTCTCGGCATTTAACCAGAAGGAATTCTaGGTGCAGAATTGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: ACSRSQKCPPKPAYLSAFNQKEF*VQNCKD
Trigger: GTCTTTGCAATTCTGCACCAAGAATTCCTTCTGGTT...AAATGCCGAGAGATAAGCTGGTTTTGGTGGACATTTCTGGCTCCTGCTGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp GGTAGTGGATTCCAACACTGCTTGCAGCAGGAGCCAGAAATGTCCACCAAAACCTTAGATAAGGAACATTaGCCGGCTGTTTCAAATTGG +
Preference number: 5 (lower is better)
Translates to: GSGFQHCLQQEPEMSTKTLDKEH*PAVSNW
Trigger: CCAATTTGAAACAGCCGGCAAATGTTCCTTATCTAA...GGTTTTGGTGGACATTTCTGGCTCCTGCTGCAAGCAGTGTTGGAATCCACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS TCA 90 bp GCAAAATCATTCTCTTTCCGGAGAGCATCACCAAGGGTAGTACAGTaGCGACTGAGAGTTTCCCTTGTTCCATCAAGAGAGCCTTCATTT +
Preference number: 5 (lower is better)
Translates to: AKSFSFRRASPRVVQ*RLRVSLVPSREPSF
Trigger: AAATGAAGGCTCTCTTGATGGAACAAGGGAAACTCTCAGTCGTCACTGTACTACCCTTGGTGATGCTCTCCGGAAAGAGAATGATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS GCA 90 bp CGAGTCGGGTGTTCTTCCAGTGAAAACAAAATTCAATTGCTTGGCTaGTCTGACCAATGCTCCCTCATCTGGAGATGCTGCTTGATAAAT +
Preference number: 5 (lower is better)
Translates to: RVGCSSSENKIQLLG*SDQCSLIWRCCLIN
Trigger: ATTTATCAAGCAGCATCTCCAGATGAGGGAGCATTGGTCAGAGCAGCCAAGCAATTGAATTTTGTTTTCACTGGAAGAACACCCGACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp CGTCCCATCCCCTTTACCACCCAAAATGAACAGTCCTTGCCACATCAAATTTATGTCAGCTGGGGCTGGTaGATGAAAATAGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: RPIPFTTQNEQSLPHQIYVSWGW*MKIVLT
Trigger: AGTAAGGACTATTTTCATCAACCAGCCCCAGCTGAC...ATAAATTTGATGTGGCAAGGACTGTTCATTTTGGGTGGTAAAGGGGATGGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACAGAGAGGAACCAGTGTaGTATAACGACCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHREEPV*YNDLLV
Trigger: CACCAACAGGTCGTTATACAACACTGGTTCCTCTCT...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGACTTGCGTTTGTTTCTaGTTCACTGCATTATCAGCT +
Preference number: 5 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGTCVCF*FTALSA
Trigger: AGCTGATAATGCAGTGAACAAGAAACAAACGCAAGT...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACCGTAGAGATGTCTGTTaGGACTTTCACACTCAATTC +
Preference number: 5 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADRRDVC*DFHTQF
Trigger: GAATTGAGTGTGAAAGTCCAAACAGACATCTCTACG...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGCGTTACGACTTTGACTaGTTTCTTAACCATCTCAAC +
Preference number: 5 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGRYDFD*FLNHLN
Trigger: GTTGAGATGGTTAAGAAACAAGTCAAAGTCGTAACG...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACGTCCTCTTGATAACCTaGTACACCACATCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHVLLIT*YTTSRS
Trigger: GCTCCTTGATGTGGTGTACAAGGTTATCAAGAGGAC...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp AACTTAGCAACACTGCTGAAGCAGTCTCACATTAGAGCACAGAGTGGAGGTGGGTTAAAAGCAGTCCTCTaGATAACCTTGTACACCACA +
Preference number: 5 (lower is better)
Translates to: NLATLLKQSHIRAQSGGGLKAVL*ITLYTT
Trigger: TGTGGTGTACAAGGTTATCAAGAGGACTGCTTTTAA...CCCACCTCCACTCTGTGCTCTAATGTGAGACTGCTTCAGCAGTGTTGCTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCTTCTTAAAGACGTTCTaGAGCAGTTGCGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSFLKTF*SSCALS
Trigger: CGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAA...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CTTGAGAGAACGCATACCCATGGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTGCTTGTTTAGAAATTTaGCTCAGGAAGGTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: LERTHTHGADFVARIQSGACLEI*LRKVSQ
Trigger: CTGACTCACCTTCCTGAGCAAAATTTCTAAACAAGC...ACCGCTCTGAATCCTTGCAACAAAATCTGCTCCATGGGTATGCGTTCTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACAGTGTAGAAAACTGGTaGTGGTTTTTAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADSVENW*WFLNSP
Trigger: GGGGCTGTTTAAAAACCACAACCAGTTTTCTACACT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACAGCAATAGCCATGCATaGGCCTGGATCACTTTAAAT +
Preference number: 5 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADSNSHA*AWITLN
Trigger: ATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTGGGAGATGTTCCCCATaGGTCACTTTCACTATCTCC +
Preference number: 5 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFGRCSP*VTFTIS
Trigger: GGAGATAGTGAAAGTGACCAATGGGGAACATCTCCC...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGAATCAAAAGGCTGGAAAAGGTAGTGGATTCCAACACTGCTTGCAGCAGGAGTCTCTGGGGTTCTGTTaGAATTTTCTTCACTGCCAC +
Preference number: 5 (lower is better)
Translates to: MNQKAGKGSGFQHCLQQESLGFC*NFLHCH
Trigger: GTGGCAGTGAAGAAAATTCAAACAGAACCCCAGAGA...CTCCTGCTGCAAGCAGTGTTGGAATCCACTACCTTTTCCAGCCTTTTGATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp GGTAGTGGATTCCAACACTGCTTGCAGCAGGAGCCAGAAATGTCCACCAAAACCCAAATTGGGAGAATATaGCAAAGGGTCATTAACCTA +
Preference number: 5 (lower is better)
Translates to: GSGFQHCLQQEPEMSTKTQIGRI*QRVINL
Trigger: TAGGTTAATGACCCTTTGCAATATTCTCCCAATTTG...GGTTTTGGTGGACATTTCTGGCTCCTGCTGCAAGCAGTGTTGGAATCCACTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTAGAGAGGAACCAGTGTaGTATAACGACCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFREEPV*YNDLLV
Trigger: CACCAACAGGTCGTTATACAACACTGGTTCCTCTCT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACGTAAGGATCCAGATTTaGATGTCTGCTTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADVRIQI*MSAFIS
Trigger: GCTAATGAAAGCAGACATCAAAATCTGGATCCTTAC...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAGCCTGCAGGCCTTCATaGCCACTGATACCAACACCA +
Preference number: 5 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTACRPS*PLIPTP
Trigger: TGGTGTTGGTATCAGTGGCAATGAAGGCCTGCAGGC...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCGTCCTCTTGATAACCTaGTACACCACATCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSVLLIT*YTTSRS
Trigger: GCTCCTTGATGTGGTGTACAAGGTTATCAAGAGGAC...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACAAATCACTCTTACATTaGGAAAGTCAGGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADKSLLH*ESQACR
Trigger: TCTGCATGCCTGACTTTCCAAATGTAAGAGTGATTT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACATTGCAACAGAAGCTTaGGAAATCCCACGTAAATAC +
Preference number: 5 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADIATEA*EIPRKY
Trigger: GTATTTACGTGGGATTTCCAAAGCTTCTGTTGCAAT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TTCATTGCCACTGATACCAACACCAACGTGCGCTGTCTGTATCATGCTGACATCATTGCAACAGAAGCTTaGGAAATCCCACGTAAATAC +
Preference number: 5 (lower is better)
Translates to: FIATDTNTNVRCLYHADIIATEA*EIPRKY
Trigger: GTATTTACGTGGGATTTCCAAAGCTTCTGTTGCAAT...GATGTCAGCATGATACAGACAGCGCACGTTGGTGTTGGTATCAGTGGCAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp ACATCAAGGAGCAGAGATGCCACAGGGATGAATAACAAGCCCATCCAAAAGACTAGTGTAGAAAACTGGTaGTGGTTTTTAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: TSRSRDATGMNNKPIQKTSVENW*WFLNSP
Trigger: GGGGCTGTTTAAAAACCACAACCAGTTTTCTACACT...AGTCTTTTGGATGGGCTTGTTATTCATCCCTGTGGCATCTCTGCTCCTTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACGTCTTGCTAGATGTGTaGATTCATGACTCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADVLLDV*IHDSLN
Trigger: ATTGAGAGAGTCATGAATCAACACATCTAGCAAGAC...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CAGGAGCCAGAAATGTCCACCAAAACCAGCTTATCTCTCGGCATTTACATAAACCCCGAAATCAGCAATTaGAGCAATTTGACCAGACAC +
Preference number: 5 (lower is better)
Translates to: QEPEMSTKTSLSLGIYINPEISN*SNLTRH
Trigger: GTGTCTGGTCAAATTGCTCAAATTGCTGATTTCGGG...GTTTATGTAAATGCCGAGAGATAAGCTGGTTTTGGTGGACATTTCTGGCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp CTGCTCCCAGTGGAACGGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAATTCTCAAAACTTGCGTTaGTTTCTTGTTCACTGCATT +
Preference number: 5 (lower is better)
Translates to: LLPVERCHVHQALCFQQNSQNLR*FLVHCI
Trigger: AATGCAGTGAACAAGAAACAAACGCAAGTTTTGAGA...ATTTTGTTGGAAACATAAGGCTTGATGGACATGGCACCGTTCCACTGGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR CAA 90 bp ATCTGCTCCCAGTGGAACGGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAACCATTTCTCAAAACTaGCGTTTGTTTCTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: ICSQWNGAMSIKPYVSNKTISQN*RLFLVH
Trigger: GTGAACAAGAAACAAACGCAAGTTTTGAGAAATGGT...TTTGTTGGAAACATAAGGCTTGATGGACATGGCACCGTTCCACTGGGAGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR CAA 90 bp GAGCTCAGATCTACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACATAGGAATGAGATTGTaGAAAAGGATGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: ELRSTFPLHGPDWNWLADIGMRL*KRMMKV
Trigger: GACCTTCATCATCCTTTTCAACAATCTCATTCCTAT...GTCTGCTAACCAATTCCAGTCTGGTCCATGAAGAGGAAAGGTAGATCTGAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACTTCTTCTTCAACAGTTaGCAGGAGTGTCCGATGTTA +
Preference number: 5 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHFFFNS*QECPML
Trigger: TAACATCGGACACTCCTGCAAACTGTTGAAGAAGAA...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTGCAAGCGTTACGACTTaGACTTGTTTCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: DSERYKFTWFFLKTFLSSASVTT*TCFLTI
Trigger: GATGGTTAAGAAACAAGTCAAAGTCGTAACGCTTGC...ACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCATGGAGCAGATTTTGTaGCAAGGATTCAGAGCGGTA +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSMEQIL*QGFRAV
Trigger: TACCGCTCTGAATCCTTGCAACAAAATCTGCTCCAT...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CACATAAGCAGCTTTCATTATTCAATATCTATGCAGCATCGGCAGAGGATGGGTATAAACCTCAGGGGATaGGTCACGGGCTTAACATTT +
Preference number: 5 (lower is better)
Translates to: HISSFHYSISMQHRQRMGINLRG*VTGLTF
Trigger: AAATGTTAAGCCCGTGACCAATCCCCTGAGGTTTAT...ACCCATCCTCTGCCGATGCTGCATAGATATTGAATAATGAAAGCTGCTTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGGTCAGCTGGGGCTGGTaGATGAAAATAGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: VSANRSSSSLLTELNTTKVSWGW*MKIVLT
Trigger: AGTAAGGACTATTTTCATCAACCAGCCCCAGCTGAC...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp GAACGGTGCCATGTCCATCAAGCCTTATGTTTCCAACAAAATCGTAGAGATGTCACTTGCGTTTGTTTCTaGTTCACTGCATTATCAGCT +
Preference number: 5 (lower is better)
Translates to: ERCHVHQALCFQQNRRDVTCVCF*FTALSA
Trigger: AGCTGATAATGCAGTGAACAAGAAACAAACGCAAGT...GACATCTCTACGATTTTGTTGGAAACATAAGGCTTGATGGACATGGCACCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR CAA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACAAACTGTCAACGTCTTaGATATCTGATGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHKLSTS*ISDVAG
Trigger: ACCAGCAACATCAGATATCAAAGACGTTGACAGTTT...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCCGTAGAGATGTCTGTTaGGACTTTCACACTCAATTC +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSRRDVC*DFHTQF
Trigger: GAATTGAGTGTGAAAGTCCAAACAGACATCTCTACG...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAATGGCAGTTTCTTGCTaGTCCCCTGTAAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTMAVSC*SPVRIQ
Trigger: CTGGATCCTTACAGGGGACAAGCAAGAAACTGCCAT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCGCAAGCGTTACGACTTaGACTTGTTTCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSASVTT*TCFLTI
Trigger: GATGGTTAAGAAACAAGTCAAAGTCGTAACGCTTGC...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTAGCAGATAATCCGAGGGCAAGCGTTACGACTTaGACTTGTTTCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: QLSPQKCTQSFPVADNPRASVTT*TCFLTI
Trigger: GATGGTTAAGAAACAAGTCAAAGTCGTAACGCTTGC...CCTCGGATTATCTGCTACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCGGTGTTACAGTACAGTaGCACAGTGCTTATGTCTAT +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSGVTVQ*HSAYVY
Trigger: ATAGACATAAGCACTGTGCAACTGTACTGTAACACC...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCCCAAACAGGAAGGGCTaGGGAAGTAAAGTATGTAAA +
Preference number: 5 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSPNRKG*GSKVCK
Trigger: TTTACATACTTTACTTCCCAAGCCCTTCCTGTTTGG...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCCCAAACAGGAAGGGCTaGGGAAGTAAAGTATGTAAA +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSPNRKG*GSKVCK
Trigger: TTTACATACTTTACTTCCCAAGCCCTTCCTGTTTGG...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GTACCTGAACATTTGACAAGGTTTTATGACGTGACTTTACCTGCAGCAGTGCAATACCTGACATGGTTATaGCAGAATTTTGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VPEHLTRFYDVTLPAAVQYLTWL*QNFVSW
Trigger: CCAGCTGACAAAATTCTGCAATAACCATGTCAGGTA...TTGCACTGCTGCAGGTAAAGTCACGTCATAAAACCTTGTCAAATGTTCAGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp AGCCGCATAAGTGGCCAGTGCTTACACAGATACTTTTTACATTATTGTTGGAATCAAAGAAGAGCAACTTaGGAGTTAAAGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRISGQCLHRYFLHYCWNQRRAT*ELKGSS
Trigger: GCTGGAGCCCTTTAACTCCAAAGTTGCTCTTCTTTG...ATTCCAACAATAATGTAAAAAGTATCTGTGTAAGCACTGGCCACTTATGCGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS CCA 90 bp TCAAGTTTGTTTCACCATCTAAGTTGGATGTTTCAATGTAGCACATaGCTTGGGGCTCACTGTAGTTTGGAGTTGAGAAGCACAAAGATT +
Preference number: 5 (lower is better)
Translates to: SSLFHHLSWMFQCST*LGAHCSLELRSTKI
Trigger: AATCTTTGTGCTTCTCAACTCCAAACTACAGTGAGCCCCAAGCCATGTGCTACATTGAAACATCCAACTTAGATGGTGAAACAAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504510.5
CDS-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCGTCAGCTGGGGCTGGTaGATGAAAATAGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFVSWGW*MKIVLT
Trigger: AGTAAGGACTATTTTCATCAACCAGCCCCAGCTGAC...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGGTGCTGACATGGTTATaGCAGAATTTTGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VSANRSSSSLLTELNTTKVLTWL*QNFVSW
Trigger: CCAGCTGACAAAATTCTGCAATAACCATGTCAGCAC...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATTTTAAGTTTCACCAAGAAGGTCATTCCCTGTCCCTCAAACCCCAAGTCTCACACCATTTCTCAAAACTaGCGTTTGTTTCTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: ILSFTKKVIPCPSNPKSHTISQN*RLFLVH
Trigger: GTGAACAAGAAACAAACGCAAGTTTTGAGAAATGGT...GTGAGACTTGGGGTTTGAGGGACAGGGAATGACCTTCTTGGTGAAACTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTAAACTGTCAACGTCTTaGATATCTGATGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFKLSTS*ISDVAG
Trigger: ACCAGCAACATCAGATATCAAAGACGTTGACAGTTT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCGTAAGGATCCAGATTTaGATGTCTGCTTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSVRIQI*MSAFIS
Trigger: GCTAATGAAAGCAGACATCAAAATCTGGATCCTTAC...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTAGCAGATAATCCGAGGGTAAGGATCCAGATTTaGATGTCTGCTTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: QLSPQKCTQSFPVADNPRVRIQI*MSAFIS
Trigger: GCTAATGAAAGCAGACATCAAAATCTGGATCCTTAC...CCTCGGATTATCTGCTACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp TCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCATGTTAATGGCAGTTTCTaGCTTGTCCCCTGTAAGGAT +
Preference number: 5 (lower is better)
Translates to: SVSWYHMLLSLQTVKRFHVNGSF*LVPCKD
Trigger: ATCCTTACAGGGGACAAGCAAGAAACTGCCATTAAC...ATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCAACAACTTCAGATTTTaGAAGAGGAGAAACCCGACA +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSNNFRF*KRRNPT
Trigger: TGTCGGGTTTCTCCTCTTCAAAAATCTGAAGTTGTT...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp CAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTAGCAGATAATCCGAGGAACAACTTCAGATTTTaGAAGAGGAGAAACCCGACA +
Preference number: 5 (lower is better)
Translates to: QLSPQKCTQSFPVADNPRNNFRF*KRRNPT
Trigger: TGTCGGGTTTCTCCTCTTCAAAAATCTGAAGTTGTT...CCTCGGATTATCTGCTACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506602.5
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCCGTTACGACTTTGACTaGTTTCTTAACCATCTCAAC +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSRYDFD*FLNHLN
Trigger: GTTGAGATGGTTAAGAAACAAGTCAAAGTCGTAACG...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGATGGAGCAGATTTTGTaGCAAGGATTCAGAGCGGTA +
Preference number: 5 (lower is better)
Translates to: VSANRSSSSLLTELNTTKMEQIL*QGFRAV
Trigger: TACCGCTCTGAATCCTTGCAACAAAATCTGCTCCAT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTAAATCACTCTTACATTaGGAAAGTCAGGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFKSLLH*ESQACR
Trigger: TCTGCATGCCTGACTTTCCAAATGTAAGAGTGATTT...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTGTCTTGCTAGATGTGTaGATTCATGACTCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFVLLDV*IHDSLN
Trigger: ATTGAGAGAGTCATGAATCAACACATCTAGCAAGAC...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTTGGGACTTCAGAATTTaGAAGACGATCTTAGACTCT +
Preference number: 5 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFWDFRI*KTILDS
Trigger: AGAGTCTAAGATCGTCTTCAAAATTCTGAAGTCCCA...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTTTAAGGGAGATTTATTaGCTGAGAAGTTTTGGGAGC +
Preference number: 5 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFLREIY*LRSFGS
Trigger: GCTCCCAAAACTTCTCAGCAAATAAATCTCCCTTAA...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp ATCGCTATGTGGCTGAACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAATTAAGGGAGATTTATTaGCTGAGAAGTTTTGGGAGC +
Preference number: 5 (lower is better)
Translates to: IAMWLNHVQYDVSNPAFKLREIY*LRSFGS
Trigger: GCTCCCAAAACTTCTCAGCAAATAAATCTCCCTTAA...TTTGAAAGCTGGATTGGAGACATCATATTGGACATGGTTCAGCCACATAGCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS GCA 90 bp AGATGCTGCTTGATAAATAATCTTGTCACCTTCTCGCTCTGGCACTaGTGTGTGACAGACTGCCATCATTGTAAGAAATTCACATATTAT +
Preference number: 5 (lower is better)
Translates to: RCCLINNLVTFSLWH*CVTDCHHCKKFTYY
Trigger: ATAATATGTGAATTTCTTACAATGATGGCAGTCTGTCACACAGCAGTGCCAGAGCGAGAAGGTGACAAGATTATTTATCAAGCAGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAGTGCTGACATGGTTATaGCAGAATTTTGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGVLTWL*QNFVSW
Trigger: CCAGCTGACAAAATTCTGCAATAACCATGTCAGCAC...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCTCTTCTATTATCTCTTaGATAGCTGCCACAGCTAAA +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSSSIIS*IAATAK
Trigger: TTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGA...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGAACGTGTCCTCTGACTGTAAAGTTACCGGCCTGAGTAAAATCCGCATTTTTTCTTCTATTATCTCTTaGATAGCTGCCACAGCTAAA +
Preference number: 5 (lower is better)
Translates to: MNVSSDCKVTGLSKIRIFSSIIS*IAATAK
Trigger: TTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGA...AAAAATGCGGATTTTACTCAGGCCGGTAACTTTACAGTCAGAGGACACGTTCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp AGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCACCATTTCTCAAAACTaGCGTTTGTTTCTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: SPLARYQVIFNFRLQRLSTISQN*RLFLVH
Trigger: GTGAACAAGAAACAAACGCAAGTTTTGAGAAATGGT...GCTAAGTCTTTGTAAACGGAAATTGAAAATGACCTGGTATCTTGCCAGAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp TGTCTGTTTGGACTTTCACACTCAATTCTGCCAGAAATCCTCATCAAACTGTCAAAACTGTCAACGTCTTaGATATCTGATGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: CLFGLSHSILPEILIKLSKLSTS*ISDVAG
Trigger: ACCAGCAACATCAGATATCAAAGACGTTGACAGTTT...TGACAGTTTGATGAGGATTTCTGGCAGAATTGAGTGTGAAAGTCCAAACAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR CAA 90 bp ATCAAACTGTCAACGTCTTTGATATCTGATGTTGCTGGTAAGCCCTGTCTAATTCGTAGAGATGTCTGTTaGGACTTTCACACTCAATTC +
Preference number: 5 (lower is better)
Translates to: IKLSTSLISDVAGKPCLIRRDVC*DFHTQF
Trigger: GAATTGAGTGTGAAAGTCCAAACAGACATCTCTACG...AATTAGACAGGGCTTACCAGCAACATCAGATATCAAAGACGTTGACAGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504024.1
CDS-3UTR CAA 90 bp TATATTAAAATTCTGCAGAAGGGTGCCACTGATGAAGTGAGCGCAAACAGAAGCATAGGAATGAGATTGTaGAAAAGGATGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: YIKILQKGATDEVSANRSIGMRL*KRMMKV
Trigger: GACCTTCATCATCCTTTTCAACAATCTCATTCCTAT...GCTTCTGTTTGCGCTCACTTCATCAGTGGCACCCTTCTGCAGAATTTTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAGTTAATGGCAGTTTCTaGCTTGTCCCCTGTAAGGAT +
Preference number: 5 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTVNGSF*LVPCKD
Trigger: ATCCTTACAGGGGACAAGCAAGAAACTGCCATTAAC...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCATTTCTTCTTCAACAGTTaGCAGGAGTGTCCGATGTTA +
Preference number: 5 (lower is better)
Translates to: SVSWYHMLLSLQTVKRFHFFFNS*QECPML
Trigger: TAACATCGGACACTCCTGCAAACTGTTGAAGAAGAA...ATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp ACCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAACACACAGTTATCACCACGTTACGACTTTGACTaGTTTCTTAACCATCTCAAC +
Preference number: 5 (lower is better)
Translates to: TMSNMMSPIQLSNTQLSPRYDFD*FLNHLN
Trigger: GTTGAGATGGTTAAGAAACAAGTCAAAGTCGTAACG...TGGTGATAACTGTGTGTTTGAAAGCTGGATTGGAGACATCATATTGGACATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506602.5
ENST00000514372.5
CDS-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGGATTCCATTTTCATCTaGAGAGAACGCATACCCATG +
Preference number: 5 (lower is better)
Translates to: VSANRSSSSLLTELNTTKDSIFI*RERIPM
Trigger: CATGGGTATGCGTTCTCTCAAGATGAAAATGGAATC...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAAGTGTAGAAAACTGGTaGTGGTTTTTAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: KAKGATSPILVANALKYSSVENW*WFLNSP
Trigger: GGGGCTGTTTAAAAACCACAACCAGTTTTCTACACT...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGCCAAACAGGAAGGGCTaGGGAAGTAAAGTATGTAAA +
Preference number: 5 (lower is better)
Translates to: VSANRSSSSLLTELNTTKPNRKG*GSKVCK
Trigger: TTTACATACTTTACTTCCCAAGCCCTTCCTGTTTGG...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCATCTTACACCTGTGGTCTaGCTAGATGTGTTGATTCAT +
Preference number: 5 (lower is better)
Translates to: SVSWYHMLLSLQTVKRFHLTPVV*LDVLIH
Trigger: ATGAATCAACACATCTAGCAAGACCACAGGTGTAAG...ATGGAATCGTTTCACAGTCTGAAGTGATAAGAGCATATGATACCACGAAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGAGCAATAGCCATGCATaGGCCTGGATCACTTTAAAT +
Preference number: 5 (lower is better)
Translates to: VSANRSSSSLLTELNTTKSNSHA*AWITLN
Trigger: ATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGACTTGCGTTTGTTTCTaGTTCACTGCATTATCAGCT +
Preference number: 5 (lower is better)
Translates to: VSANRSSSSLLTELNTTKTCVCF*FTALSA
Trigger: AGCTGATAATGCAGTGAACAAGAAACAAACGCAAGT...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACATTCTTCTTCAACAGTTaGCAGGAGTGTCCGATGTTA +
Preference number: 5 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTFFFNS*QECPML
Trigger: TAACATCGGACACTCCTGCAAACTGTTGAAGAAGAA...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp AAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAATATTCAAACAACTTCAGATTTTaGAAGAGGAGAAACCCGACA +
Preference number: 5 (lower is better)
Translates to: KAKGATSPILVANALKYSNNFRF*KRRNPT
Trigger: TGTCGGGTTTCTCCTCTTCAAAAATCTGAAGTTGTT...TGAATATTTCAAGGCATTTGCTACTAAAATCGGTGATGTTGCACCTTTGGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAGATTCCATTTTCATCTaGAGAGAACGCATACCCATG +
Preference number: 5 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTDSIFI*RERIPM
Trigger: CATGGGTATGCGTTCTCTCAAGATGAAAATGGAATC...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGATTCCATTTTCATCTaGAGAGAACGCATACCCATG +
Preference number: 5 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTDSIFI*RERIPM
Trigger: CATGGGTATGCGTTCTCTCAAGATGAAAATGGAATC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CCAGCTTTCAAACACACAGTTATCACCACAAAAGTGTACACAAAGTTTCCCAGTCTTAAGAATGCTGGTTaGTTTCAGCATATCCTGAAA +
Preference number: 5 (lower is better)
Translates to: PAFKHTVITTKVYTKFPSLKNAG*FQHILK
Trigger: TTTCAGGATATGCTGAAACAAACCAGCATTCTTAAG...ACTGGGAAACTTTGTGTACACTTTTGTGGTGATAACTGTGTGTTTGAAAGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514372.5
CDS-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAGCTTGTTTAGAAATTTaGCTCAGGAAGGTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTACLEI*LRKVSQ
Trigger: CTGACTCACCTTCCTGAGCAAAATTTCTAAACAAGC...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGCTTGTTTAGAAATTTaGCTCAGGAAGGTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTACLEI*LRKVSQ
Trigger: CTGACTCACCTTCCTGAGCAAAATTTCTAAACAAGC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACACTTACACCTGTGGTCTaGCTAGATGTGTTGATTCAT +
Preference number: 5 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTLTPVV*LDVLIH
Trigger: ATGAATCAACACATCTAGCAAGACCACAGGTGTAAG...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp AGCCGCATAAGTGGCCAGTGCTTACACAGATACTTTTTACATTATTGTTGGAATAGCAATTTGAGCAATTaGACCAGACACTGTAAACAG +
Preference number: 5 (lower is better)
Translates to: SRISGQCLHRYFLHYCWNSNLSN*TRHCKQ
Trigger: CTGTTTACAGTGTCTGGTCAAATTGCTCAAATTGCT...ATTCCAACAATAATGTAAAAAGTATCTGTGTAAGCACTGGCCACTTATGCGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTTGTATAACGACCTGTaGGTGACACATCAGGTATTT +
Preference number: 5 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFLYNDL*VTHQVF
Trigger: AAATACCTGATGTGTCACCAACAGGTCGTTATACAA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACATTGTATAACGACCTGTaGGTGACACATCAGGTATTT +
Preference number: 5 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTLYNDL*VTHQVF
Trigger: AAATACCTGATGTGTCACCAACAGGTCGTTATACAA...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp GTGAGCGCAAACAGAAGCAGCTCTTCTCTATTAACAGAATTAAACACTACAAAGTTTAGGGTAATTTCTTaGTATTTTGACGTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VSANRSSSSLLTELNTTKFRVIS*YFDVSA
Trigger: GGCAGAGACGTCAAAATACAAAGAAATTACCCTAAA...CTTTGTAGTGTTTAATTCTGTTAATAGAGAAGAGCTGCTTCTGTTTGCGCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTAAAAGCAGTCCTCTaGATAACCTTGTACACCACA +
Preference number: 5 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTLKAVL*ITLYTT
Trigger: TGTGGTGTACAAGGTTATCAAGAGGACTGCTTTTAA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCATTGCAACAGAAGCTTaGGAAATCCCACGTAAATAC +
Preference number: 5 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFIATEA*EIPRKY
Trigger: GTATTTACGTGGGATTTCCAAAGCTTCTGTTGCAAT...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACAGTCTTGCTAGATGTGTaGATTCATGACTCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTVLLDV*IHDSLN
Trigger: ATTGAGAGAGTCATGAATCAACACATCTAGCAAGAC...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTTAAGGGAGATTTATTaGCTGAGAAGTTTTGGGAGC +
Preference number: 5 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFLREIY*LRSFGS
Trigger: GCTCCCAAAACTTCTCAGCAAATAAATCTCCCTTAA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGAATTCTGCTCACATCTTaGCAAGAACAGATTTACCTG +
Preference number: 5 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGILLTS*QEQIYL
Trigger: CAGGTAAATCTGTTCTTGCAAAGATGTGAGCAGAAT...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCTCTCAAAACTTGCGTTaGTTTCTTGTTCACTGCATT +
Preference number: 5 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFSQNLR*FLVHCI
Trigger: AATGCAGTGAACAAGAAACAAACGCAAGTTTTGAGA...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATCTCAAAACTTGCGTTaGTTTCTTGTTCACTGCATT +
Preference number: 5 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTSQNLR*FLVHCI
Trigger: AATGCAGTGAACAAGAAACAAACGCAAGTTTTGAGA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTTTAAATATGAACCTGATAGGAATGAGATaGTTGAAAAGGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: IKIYSNSHALAWITLNMNLIGMR*LKRMMK
Trigger: CTTCATCATCCTTTTCAACAATCTCATTCCTATCAG...GTTCATATTTAAAGTGATCCAGGCCAATGCATGGCTATTGCTGTAAATCTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp TCTCTATTAACAGAATTAAACACTACAAAGTGTTTCTCTGGAGGGGTGCATTTCCTGATAGGAATGAGATaGTTGAAAAGGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: SLLTELNTTKCFSGGVHFLIGMR*LKRMMK
Trigger: CTTCATCATCCTTTTCAACAATCTCATTCCTATCAG...GAAATGCACCCCTCCAGAGAAACACTTTGTAGTGTTTAATTCTGTTAATAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp TGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTGGATTAAACTGCATTACATaGCATGTCAGAGTACCAGTT +
Preference number: 5 (lower is better)
Translates to: CCTVHAMQNKLSCDFHIGLNCIT*HVRVPV
Trigger: AACTGGTACTCTGACATGCAATGTAATGCAGTTTAA...TCCAATGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp GTAAGTGTTGTACAGTGCACGCAATGCAAAACAAATTATCATGTGACTTTCACATTAAACTGCATTACATaGCATGTCAGAGTACCAGTT +
Preference number: 5 (lower is better)
Translates to: VSVVQCTQCKTNYHVTFTLNCIT*HVRVPV
Trigger: AACTGGTACTCTGACATGCAATGTAATGCAGTTTAA...TGTGAAAGTCACATGATAATTTGTTTTGCATTGCGTGCACTGTACAACACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACAAAGGTTAAGGCATATTaGAGGGTTTTCCCATCAATT +
Preference number: 5 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTKVKAY*RVFPSI
Trigger: AATTGATGGGAAAACCCTCAAATATGCCTTAACCTT...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS-3UTR CAA 90 bp ATGTCAATAATTCAAAAACAGGACGATGGGACAAAGAGGCTCAAATTAGTCACACTTAAGAATGCTGGTTaGTTTCAGCATATCCTGAAA +
Preference number: 5 (lower is better)
Translates to: MSIIQKQDDGTKRLKLVTLKNAG*FQHILK
Trigger: TTTCAGGATATGCTGAAACAAACCAGCATTCTTAAG...TGTGACTAATTTGAGCCTCTTTGTCCCATCGTCCTGTTTTTGAATTATTGACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000514372.5
CDS-3UTR CAA 90 bp CTATTTCCAGATTCTTATGAATATTTCTCTATGGGAGAGAAGATGGGGAAACAGAACACTTTATTGGTATaGAAGGTGTTTATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LFPDSYEYFSMGEKMGKQNTLLV*KVFMWS
Trigger: GGACCACATAAACACCTTCAATACCAATAAAGTGTT...CTGTTTCCCCATCTTCTCTCCCATAGAGAAATATTCATAAGAATCTGGAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS-3UTR CAA 90 bp CTATTTCCAGATTCTTATGAATATTTCTCTATGGGAGAGAAGATGGGGAAACAGTTAGTACCTGAACATTaGACAAGGTTTTATGACGTG +
Preference number: 5 (lower is better)
Translates to: LFPDSYEYFSMGEKMGKQLVPEH*TRFYDV
Trigger: CACGTCATAAAACCTTGTCAAATGTTCAGGTACTAA...CTGTTTCCCCATCTTCTCTCCCATAGAGAAATATTCATAAGAATCTGGAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510289.1
CDS GCA 72 bp CACCTGTCACGGCGTGGTACACGCGGGAGACCCGGCTaGGCCGCGCAGAGCGCTCAGCTGCAGCCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: HLSRRGTRGRPG*AAQSAQLQPGP
Trigger: CGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS GCA 72 bp CGGCGGCGGCTGCAGGTGGGTCCTCAGCCCGGACTCTaGACCTGTCACGGCGTGGTACACGCGGGAGACCCG +
Preference number: 6 (lower is better)
Translates to: RRRLQVGPQPGL*TCHGVVHAGDP
Trigger: CGGGTCTCCCGCGTGTACCACGCCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS CCA 72 bp CCTCCGCATGGTGGGCATCGCGGCGGCGGCTGCAGGTaGGTCCTCAGCCCGGACTCTGCACCTGTCACGGCG +
Preference number: 6 (lower is better)
Translates to: PPHGGHRGGGCR*VLSPDSAPVTA
Trigger: CGCCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS CCA 72 bp CGCGCGAGCGGATCTCCGACACGGTCCTCCGCATGGTaGGCATCGCGGCGGCGGCTGCAGGTGGGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: RASGSPTRSSAW*ASRRRLQVGPQ
Trigger: CTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS CCA 72 bp TGGGTCCTCAGCCCGGACTCTGCACCTGTCACGGCGTaGTACACGCGGGAGACCCGGCTGCGCCGCGCAGAG +
Preference number: 6 (lower is better)
Translates to: WVLSPDSAPVTA*YTRETRLRRAE
Trigger: CTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000510289.1
CDS CAA 72 bp GTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTaGCGCCCTCTCGGTCAGGCTGCAGAGCAGGTGCAA +
Preference number: 6 (lower is better)
Translates to: VHVVLLKDVLEQ*RPLGQAAEQVQ
Trigger: TTGCACCTGCTCTGCAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS CAA 72 bp CGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTaGAGCAGTTGCGCCCTCTCGGTCAGGCTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: RYKFTWFFLKTF*SSCALSVRLQS
Trigger: GCTCTGCAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS TCA 72 bp TCGGTCAGGCTGCAGAGCAGGTGCAAATGTGTGAAATaGATTATCAACTCGGCAGAGACCCCAGTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: SVRLQSRCKCVK*IINSAETPVCP
Trigger: TGGGCACACTGGGGTCTCTGCCGAGTTGATAATTCATTTCACACATTTGCACCTGCTCTGCAGCCTGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS TCA 72 bp CCCTCTCGGTCAGGCTGCAGAGCAGGTGCAAATGTGTaGAATGAATTATCAACTCGGCAGAGACCCCAGTGT +
Preference number: 6 (lower is better)
Translates to: PSRSGCRAGANV*NELSTRQRPQC
Trigger: ACACTGGGGTCTCTGCCGAGTTGATAATTCATTTCACACATTTGCACCTGCTCTGCAGCCTGACCGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS GCA 72 bp TTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTTaGGCCCTCTCGGTCAGGCTGCAGAGCAGGTGCAAA +
Preference number: 6 (lower is better)
Translates to: FTWFFLKTFLSS*ALSVRLQSRCK
Trigger: TTTGCACCTGCTCTGCAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS CAA 90 bp GCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTaGCGCCCTCTCGGTCAGGCTGCAGAGCAGGTGCAAATGTGTGAA +
Preference number: 6 (lower is better)
Translates to: AVQVHVVLLKDVLEQ*RPLGQAAEQVQMCE
Trigger: TTCACACATTTGCACCTGCTCTGCAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS CAA 90 bp GATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTaGAGCAGTTGCGCCCTCTCGGTCAGGCTGCAGAGCAGGTGCAAA +
Preference number: 6 (lower is better)
Translates to: DSERYKFTWFFLKTF*SSCALSVRLQSRCK
Trigger: TTTGCACCTGCTCTGCAGCCTGACCGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGCTCTGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511858.1
CDS CAA 72 bp GACAGACTGATGAGATCTGCTGGGAGATGTTCCCCATaGGTCACTTTCACTATCTCCCCTACTGCCACCTTT +
Preference number: 6 (lower is better)
Translates to: DRLMRSAGRCSP*VTFTISPTATF
Trigger: AAAGGTGGCAGTAGGGGAGATAGTGAAAGTGACCAATGGGGAACATCTCCCAGCAGATCTCATCAGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381668.9
CDS TCA 72 bp TTCTCTTTCCGGAGAGCATCACCAAGGGTAGTACAGTaGCGACTGAGAGTTTCCCTTGTTCCATCAAGAGAG +
Preference number: 6 (lower is better)
Translates to: FSFRRASPRVVQ*RLRVSLVPSRE
Trigger: CTCTCTTGATGGAACAAGGGAAACTCTCAGTCGTCACTGTACTACCCTTGGTGATGCTCTCCGGAAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS CCA 72 bp TTTCACCATCTAAGTTGGATGTTTCAATGTAGCACATaGCTTGGGGCTCACTGTAGTTTGGAGTTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: FHHLSWMFQCST*LGAHCSLELRS
Trigger: GCTTCTCAACTCCAAACTACAGTGAGCCCCAAGCCATGTGCTACATTGAAACATCCAACTTAGATGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504510.5
CDS CCA 72 bp TTTCACCATCTAAGTTGGATGTTTCAATGTAGCACATaGCTTGGGGCTCACTTGATGAGAGAAGTACAGTGT +
Preference number: 6 (lower is better)
Translates to: FHHLSWMFQCST*LGAHLMREVQC
Trigger: ACACTGTACTTCTCTCATCAAGTGAGCCCCAAGCCATGTGCTACATTGAAACATCCAACTTAGATGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264449.14
CDS TCA 72 bp ATAATCTTGTCACCTTCTCGCTCTGGCACTGCTGTGTaGCAGACTGCCATCATTGTAAGAAATTCACATATT +
Preference number: 6 (lower is better)
Translates to: IILSPSRSGTAV*QTAIIVRNSHI
Trigger: AATATGTGAATTTCTTACAATGATGGCAGTCTGTCACACAGCAGTGCCAGAGCGAGAAGGTGACAAGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS GCA 72 bp TTGATAAATAATCTTGTCACCTTCTCGCTCTGGCACTaGTGTGTGACAGACTGCCATCATTGTAAGAAATTC +
Preference number: 6 (lower is better)
Translates to: LINNLVTFSLWH*CVTDCHHCKKF
Trigger: GAATTTCTTACAATGATGGCAGTCTGTCACACAGCAGTGCCAGAGCGAGAAGGTGACAAGATTATTTATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS CAA 72 bp TCATTTGCTCCATCACCGATTGCAAGCGTTACGACTTaGACTTGTTTCTTAACCATCTCAACAACTTCAGAT +
Preference number: 6 (lower is better)
Translates to: SFAPSPIASVTT*TCFLTISTTSD
Trigger: ATCTGAAGTTGTTGAGATGGTTAAGAAACAAGTCAAAGTCGTAACGCTTGCAATCGGTGATGGAGCAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264449.14
ENST00000381668.9
ENST00000506602.5
ENST00000514372.5
ENST00000515872.1
CDS CAA 90 bp GGCTCACTTGATGAGAGAAGTACAGTGTCAGCAGGTATATACTCTTaGCCTTTTATTATAACTATATCTCCAACATTTACCTTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: GSLDERSTVSAGIYS*PFIITISPTFTFSQ
Trigger: CTGGGAAAAGGTAAATGTTGGAGATATAGTTATAATAAAAGGCAAAGAGTATATACCTGCTGACACTGTACTTCTCTCATCAAGTGAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264449.14
CDS CAA 90 bp GCTAAGTCCAGGAAATACTGTCGTACTCCAAAGGTTAAGGCATATTaGAGGGTTTTCCCATCAATTATAAGAGCAAAATCATTCTCTTTC +
Preference number: 6 (lower is better)
Translates to: AKSRKYCRTPKVKAY*RVFPSIIRAKSFSF
Trigger: GAAAGAGAATGATTTTGCTCTTATAATTGATGGGAAAACCCTCAAATATGCCTTAACCTTTGGAGTACGACAGTATTTCCTGGACTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS CAA 72 bp AGGAAATACTGTCGTACTCCAAAGGTTAAGGCATATTaGAGGGTTTTCCCATCAATTATAAGAGCAAAATCA +
Preference number: 6 (lower is better)
Translates to: RKYCRTPKVKAY*RVFPSIIRAKS
Trigger: TGATTTTGCTCTTATAATTGATGGGAAAACCCTCAAATATGCCTTAACCTTTGGAGTACGACAGTATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264449.14
ENST00000381668.9
CDS CAA 72 bp GATGAGAGAAGTACAGTGTCAGCAGGTATATACTCTTaGCCTTTTATTATAACTATATCTCCAACATTTACC +
Preference number: 6 (lower is better)
Translates to: DERSTVSAGIYS*PFIITISPTFT
Trigger: GGTAAATGTTGGAGATATAGTTATAATAAAAGGCAAAGAGTATATACCTGCTGACACTGTACTTCTCTCATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264449.14