RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP7A (Homo sapiens)

Ensembl gene IDs: ENSG00000165240

Ensembl transcript IDs: ENST00000341514.11, ENST00000343533.9, ENST00000642523.1, ENST00000642651.1, ENST00000645094.1, ENST00000645454.1, ENST00000682475.1, ENST00000682742.1

Found 748 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAAAGGGTTGTGTCTGCTCCAACATGTGTTGCGCAGATAAGCAGTaGCCCGTTCTGGTTAATGGAACCAGCAATCACTGTGCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: RKGCVCSNMCCADKQ*PVLVNGTSNHCAAR
Trigger: CCTGGCAGCACAGTGATTGCTGGTTCCATTAACCAGAACGGGTCACTGCTTATCTGCGCAACACATGTTGGAGCAGACACAACCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 90 bp GTGTCTGCTCCAACATGTGTTGCGCAGATAAGCAGTGACCCGTTCTaGTTAATGGAACCAGCAATCACTGTGCTGCCAGGTTTCTTAGCC +
Preference number: 1 (lower is better)
Translates to: VSAPTCVAQISSDPF*LMEPAITVLPGFLA
Trigger: GGCTAAGAAACCTGGCAGCACAGTGATTGCTGGTTCCATTAACCAGAACGGGTCACTGCTTATCTGCGCAACACATGTTGGAGCAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 90 bp GCCCCGGTGATACAGCCTCTATTGCTTTTCTCAGGGATTCTGGAGTaGCTGAGCTTGCATTATACTTCACAATGGCAGACCTATTCTCTA +
Preference number: 1 (lower is better)
Translates to: APVIQPLLLFSGILE*LSLHYTSQWQTYSL
Trigger: TAGAGAATAGGTCTGCCATTGTGAAGTATAATGCAAGCTCAGTCACTCCAGAATCCCTGAGAAAAGCAATAGAGGCTGTATCACCGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 90 bp CACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTaGGGGTTGTATAACAGCAGGATTATACCTTACTTCTGCCTTGCC +
Preference number: 1 (lower is better)
Translates to: HSGSKSKFSDELCYH*GLYNSRIIPYFCLA
Trigger: GGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 90 bp TTACCTTATGAGCCATCTCCAATGGCTCTCCACCTTTTATTAGTATaGCATTTTGAGCACCTACTCCTGTACCCACCATCACAGCAGTTG +
Preference number: 1 (lower is better)
Translates to: LPYEPSPMALHLLLV*HFEHLLLYPPSQQL
Trigger: CAACTGCTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATACTAATAAAAGGTGGAGAGCCATTGGAGATGGCTCATAAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 90 bp GTTTCTTGTGTCAGAGGCTGGCTAACTACATTCAAAGGAATCTTCTaGAGAGATGAGCTGGAGGGAGAGTTTGAGGTACTCTCAACTTCA +
Preference number: 1 (lower is better)
Translates to: VSCVRGWLTTFKGIF*RDELEGEFEVLSTS
Trigger: TGAAGTTGAGAGTACCTCAAACTCTCCCTCCAGCTCATCTCTTCAGAAGATTCCTTTGAATGTAGTTAGCCAGCCTCTGACACAAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 90 bp GTCAGAAACAAGGTGTCAGTTAAAACAGGGAGAGGGTCAGGATTATaGATAACAGCATCAAAGCCCATGTCATCAATAGCTTCCTGTAGG +
Preference number: 1 (lower is better)
Translates to: VRNKVSVKTGRGSGL*ITASKPMSSIASCR
Trigger: CCTACAGGAAGCTATTGATGACATGGGCTTTGATGCTGTTATCCATAATCCTGACCCTCTCCCTGTTTTAACTGACACCTTGTTTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 90 bp TCTCCAGTCATCAGAACTACTTCTAAGCCCATAGATTTCAGAATATaGATAGCCAGTTCTGCTTCAGGCTTCACTGTGTCTGCAATGGCT +
Preference number: 1 (lower is better)
Translates to: SPVIRTTSKPIDFRI*IASSASGFTVSAMA
Trigger: AGCCATTGCAGACACAGTGAAGCCTGAAGCAGAACTGGCTATCCATATTCTGAAATCTATGGGCTTAGAAGTAGTTCTGATGACTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 90 bp ACGTTTCTGGAGAGGTTAGTAGAGGATCATACTCAACAGTCCCATTaGTATTTGCAAGGGAGACTCGTATGGATTTTACACCTGGCTTTT +
Preference number: 1 (lower is better)
Translates to: TFLERLVEDHTQQSH*YLQGRLVWILHLAF
Trigger: AAAAGCCAGGTGTAAAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTCTACTAACCTCTCCAGAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 90 bp TGCTATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTaGCTTGCCAGCCATCAGGGCCACAAGTATAGAATATATTCCTTC +
Preference number: 1 (lower is better)
Translates to: CYHWGLYNSRIIPYF*LASHQGHKYRIYSF
Trigger: GAAGGAATATATTCTATACTTGTGGCCCTGATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 90 bp CCCAGTGAACAGGGACATGCAATACACAGAACTGTGATAGAGGCTTaGAAAGCAAATCGTATTATCGTTTCTGTTCGGGAGATACTTCTA +
Preference number: 1 (lower is better)
Translates to: PSEQGHAIHRTVIEA*KANRIIVSVREILL
Trigger: TAGAAGTATCTCCCGAACAGAAACGATAATACGATTTGCTTTCCAAGCCTCTATCACAGTTCTGTGTATTGCATGTCCCTGTTCACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 90 bp GGCAAATGCAATGGTGGTTGCCAGCACAATCAGTACGTCCATATTTaGTGTCTTATGCTTCAGTGCTTTATAAGCCTGAATGTAGAAGTA +
Preference number: 1 (lower is better)
Translates to: GKCNGGCQHNQYVHI*CLMLQCFISLNVEV
Trigger: TACTTCTACATTCAGGCTTATAAAGCACTGAAGCATAAGACAGCAAATATGGACGTACTGATTGTGCTGGCAACCACCATTGCATTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 90 bp GGACTCATCTACCATAGAATGTCCTTCAATAACACGACCATCCACTaGAAATTTGCCTCCTGGAACTACTTTAATGATATCTCCACGTTG +
Preference number: 1 (lower is better)
Translates to: GLIYHRMSFNNTTIH*KFASWNYFNDISTL
Trigger: CAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGTGGATGGTCGTGTTATTGAAGGACATTCTATGGTAGATGAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 90 bp CTGCTATTCCCACTGTCCCACAATATGAATACAAGACCAAGAGGATaGCTCCAAGGTACACATAATAATGGAAGAATAACTGGCTGTGTT +
Preference number: 1 (lower is better)
Translates to: LLFPLSHNMNTRPRG*LQGTHNNGRITGCV
Trigger: AACACAGCCAGTTATTCTTCCATTATTATGTGTACCTTGGAGTCATCCTCTTGGTCTTGTATTCATATTGTGGGACAGTGGGAATAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR GCA 90 bp TTTAGACGTTCTACATCAATAGCTCCCAATTTGAGGTACTTGGGCTaGTTTTTGACAAATGCTGGAAAGCCCATAGCTTCAATCTGCTTT +
Preference number: 1 (lower is better)
Translates to: FRRSTSIAPNLRYLG*FLTNAGKPIASICF
Trigger: AAAGCAGATTGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGATGTAGAACGTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 90 bp ATGATGAAAGTGGCTGTTGAATCATTGGTATATGATGGACTCCTTTaGTGTGACCCTTCTGAGGATTTAACTGGTGTGTTCTTTAGACGT +
Preference number: 1 (lower is better)
Translates to: MMKVAVESLVYDGLL*CDPSEDLTGVFFRR
Trigger: ACGTCTAAAGAACACACCAGTTAAATCCTCAGAAGGGTCACAGCAAAGGAGTCCATCATATACCAATGATTCAACAGCCACTTTCATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 90 bp ATTTTCTATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTaGTATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTC +
Preference number: 1 (lower is better)
Translates to: IFYHSGSKSKFSDEL*YHWGLYNSRIIPYF
Trigger: GAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATAGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 90 bp AGTGTCCCAGTATCTAAACTGAGTTCTGGAACCAGCTCTTTTATCTaGTTGGCATTCACTATAGAAGGGATTATTGTCACTGCTACAGTT +
Preference number: 1 (lower is better)
Translates to: SVPVSKLSSGTSSFI*LAFTIEGIIVTATV
Trigger: AACTGTAGCAGTGACAATAATCCCTTCTATAGTGAATGCCAATCAGATAAAAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 90 bp AAAAGAACTAACATTTACCGAGTACAAATCCTATGTGCCAGATGTTaGGTTAGCAGCAGCTTTGCTTCTGGTAATGGGAACAAAATGTTA +
Preference number: 1 (lower is better)
Translates to: KRTNIYRVQILCARC*VSSSFASGNGNKML
Trigger: TAACATTTTGTTCCCATTACCAGAAGCAAAGCTGCTGCTAACCCAACATCTGGCACATAGGATTTGTACTCGGTAAATGTTAGTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR TCA 90 bp GATTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATaGATACAAGACCAAGAGGATGACTCCAAGGTACACATAATAATG +
Preference number: 1 (lower is better)
Translates to: DYFNTTSCYSHCPTI*IQDQEDDSKVHIIM
Trigger: CATTATTATGTGTACCTTGGAGTCATCCTCTTGGTCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR TCA 90 bp TGCTGGAAAGCCCATAGCTTCAATCTGCTTTTTCATTTCCTCTACTaGGATAAGATGAGGTTGATAAACAATAGTAGCTTCTTGATTGTC +
Preference number: 1 (lower is better)
Translates to: CWKAHSFNLLFHFLY*DKMRLINNSSFLIV
Trigger: GACAATCAAGAAGCTACTATTGTTTATCAACCTCATCTTATCTCAGTAGAGGAAATGAAAAAGCAGATTGAAGCTATGGGCTTTCCAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 90 bp GAATATCTTAACTACAGTAGATGGATATTGCACAACATCGTCCACTaGTGTTTTCGGTACCAAACAATCAATGTTCAACAACGTTTAGCT +
Preference number: 1 (lower is better)
Translates to: EYLNYSRWILHNIVH*CFRYQTINVQQRLA
Trigger: AGCTAAACGTTGTTGAACATTGATTGTTTGGTACCGAAAACAGCAGTGGACGATGTTGTGCAATATCCATCTACTGTAGTTAAGATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR GCA 90 bp AGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTaGTCTACCTTATCTGTTGTTAGTGAAAACAAAAATATACTGGAA +
Preference number: 1 (lower is better)
Translates to: SSSAISNCRACCKPH*STLSVVSENKNILE
Trigger: TTCCAGTATATTTTTGTTTTCACTAACAACAGATAAGGTAGAGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR GCA 90 bp GTTGATCATTTCTTCTTTACTCATGTTTTGATTATGGTGAAGAGTTaGAAAGTGGTGGTCCATAACCATCATATATATCATCAGCCCCAT +
Preference number: 1 (lower is better)
Translates to: VDHFFFTHVLIMVKS*KVVVHNHHIYHQPH
Trigger: ATGGGGCTGATGATATATATGATGGTTATGGACCACCACTTTGCAACTCTTCACCATAATCAAAACATGAGTAAAGAAGAAATGATCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 90 bp ATCATGGAAGACGAAGTTGATGACTGTTCATTACTGGCATCAATTTaGACCAGGGATGCATTTTTAATATTATTGTCCTCTATATTCCAG +
Preference number: 1 (lower is better)
Translates to: IMEDEVDDCSLLASI*TRDAFLILLSSIFQ
Trigger: CTGGAATATAGAGGACAATAATATTAAAAATGCATCCCTGGTTCAAATTGATGCCAGTAATGAACAGTCATCAACTTCGTCTTCCATGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp GTATGCCATTTTGAGCACCTACTCCTGTACCCACCATCACAGCAGTaGGAGTGGCCAGTCCCAGTGAACAGGGACATGCAATACACAGAA +
Preference number: 2 (lower is better)
Translates to: VCHFEHLLLYPPSQQ*EWPVPVNRDMQYTE
Trigger: TTCTGTGTATTGCATGTCCCTGTTCACTGGGACTGGCCACTCCAACTGCTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGGCCTGGGCGACAGAGTaGGATTCCATCCTGGGAATG +
Preference number: 2 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVAWATE*DSILGM
Trigger: CATTCCCAGGATGGAATCTCACTCTGTCGCCCAGGC...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
3UTR-3UTR GCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGCCAGGAGCCAGAGGTTaGAGTGAGCTGAGATGGCAC +
Preference number: 2 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVPGARG*SELRWH
Trigger: GTGCCATCTCAGCTCACTGCAACCTCTGGCTCCTGG...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
3UTR-3UTR GCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGCCAGGAATGGTGACGTaGACCTGTAGTCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVPGMVT*TCSPSY
Trigger: GTAGCTGGGACTACAGGTGCACGTCACCATTCCTGG...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
3UTR-3UTR CCA 90 bp GACCCGTTCTGGTTAATGGAACCAGCAATCACTGTGCTGCCAGGTTTCTTAGCCAACACGACCATCCACTaGAAATTTGCCTCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: DPFWLMEPAITVLPGFLANTTIH*KFASWN
Trigger: GTTCCAGGAGGCAAATTTCCAGTGGATGGTCGTGTT...GGCTAAGAAACCTGGCAGCACAGTGATTGCTGGTTCCATTAACCAGAACGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGATTTCCGATGAAGGCTaGGCTATTACTACCAACGGC +
Preference number: 2 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKISDEG*AITTNG
Trigger: GCCGTTGGTAGTAATAGCTCAGCCTTCATCGGAAAT...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGATTATACCTTACTTCTaGCTTGCCAGCCATCAGGGC +
Preference number: 2 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKIIPYF*LASHQG
Trigger: GCCCTGATGGCTGGCAAGGCAGAAGTAAGGTATAAT...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGCCATGGCAAAGTCAGTaGCGCCGTAACAGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGPWQSQ*RRNSQK
Trigger: TTTCTGACTGTTACGGCGTCACTGACTTTGCCATGG...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCTGGCTGTGTTCAACTaGTTGAGGTGGGTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: IGESEPALDIKVSLLSSDLAVFN*LRWVGG
Trigger: CCCTCCCACCCACCTCAAGCAGTTGAACACAGCCAG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp CACAACCTGGAAATCTATGCAGGTACCCAAGGTTTCAGTGTCCAGCTCCTGTTTGTGATACCCTGGGAATaGATGGCTGGCTCAACATTT +
Preference number: 2 (lower is better)
Translates to: HNLEIYAGTQGFSVQLLFVIPWE*MAGSTF
Trigger: AAATGTTGAGCCAGCCATGCATTCCCAGGGTATCAC...AAACAGGAGCTGGACACTGAAACCTTGGGTACCTGCATAGATTTCCAGGTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp GACCCGTTCTGGTTAATGGAACCAGCAATCACTGTGCTGCCAGGTTTCTTAGCCCAGTACGTCCATATTTaGTGTCTTATGCTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: DPFWLMEPAITVLPGFLAQYVHI*CLMLQC
Trigger: GCACTGAAGCATAAGACAGCAAATATGGACGTACTG...GGCTAAGAAACCTGGCAGCACAGTGATTGCTGGTTCCATTAACCAGAACGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGAGTGAGATTCCATCCTaGGAATGCATGGCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVSEIPS*ECMAGS
Trigger: TGAGCCAGCCATGCATTCCCAGGATGGAATCTCACT...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
3UTR CAA 90 bp GGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTaGTATAACAGCAGGATTATACCTTACTTCTGCCTTGCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: GSKSKFSDELCYHWG*YNSRIIPYFCLASH
Trigger: ATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp CACAACCTGGAAATCTATGCAGGTACCCAAGGTTTCAGTGTCCAGCTCCTGTTTGAGACTTTAATTCGCTaGACACCTTGCAGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: HNLEIYAGTQGFSVQLLFETLIR*TPCSFP
Trigger: TGGGAAACTGCAAGGTGTTCAGCGAATTAAAGTCTC...AAACAGGAGCTGGACACTGAAACCTTGGGTACCTGCATAGATTTCCAGGTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp AAGGTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAACCTTACTTCTGCCTTaGCAGCCATCAGGGCCACAA +
Preference number: 2 (lower is better)
Translates to: KVSVSSSCLQYLVMAVPRTLLLP*QPSGPQ
Trigger: TTGTGGCCCTGATGGCTGGCAAGGCAGAAGTAAGGT...TCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp GTTGCAAAGTGGTGGTCCATAACCATCATATATATCATCAGCCCCATTACAGGAATGTGCTTTGTTGGTTaGCAGGGCCACGGAGCAGTA +
Preference number: 2 (lower is better)
Translates to: VAKWWSITIIYIISPITGMCFVG*QGHGAV
Trigger: TACTGCTCCGTGGCCCTGGCAACCAACAAAGCACAT...TCCTGTAATGGGGCTGATGATATATATGATGGTTATGGACCACCACTTTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTGCTGTGTCAGTGCATaGCAAGTTAAACTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: KMGGREPYRPLRSFELQNCCVSA*QVKLAA
Trigger: TGCTGCCAGTTTAACTTGTCATGCACTGACACAGCA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGAATAGTGCTAGTACATaGATGGCAGGTCATCCCTTC +
Preference number: 2 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGNSAST*MAGHPF
Trigger: GAAGGGATGACCTGCCATTCATGTACTAGCACTATT...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTGCTTTGAAAGTCATTaGTCCCCAGTGGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: IGESEPALDIKVSLLSSDCFESH*SPVGQG
Trigger: TCCCTGCCCCACTGGGGAGCAATGACTTTCAAAGCA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGATTCCATCCTGGGAATaGATGGCTGGCTCAACATTT +
Preference number: 2 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVIPSWE*MAGSTF
Trigger: AAATGTTGAGCCAGCCATGCATTCCCAGGATGGAAT...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
3UTR-3UTR GCA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGGTCATATTTAATATGTaGTTTGTTGGTTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKVIFNM*FVGCQG
Trigger: GCCCTGGCAACCAACAAAGCACATATTAAATATGAC...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCATGACAAGTTAAACTaGCAGCACTCTCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVHDKLN*QHSPWP
Trigger: AGGCCATGGAGAGTGCTGCCAGTTTAACTTGTCATG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTGCTGTGTCAGTGCATaGCAAGTTAAACTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRCCVSA*QVKLAA
Trigger: TGCTGCCAGTTTAACTTGTCATGCACTGACACAGCA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGTGAAGGTAACATCATaGATGCTGTGTCAGTGCATG +
Preference number: 2 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVVKVTS*MLCQCM
Trigger: CATGCACTGACACAGCATTCATGATGTTACCTTCAC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCCAACTTGGCAGGAGTaGACTGAAACTGAGCACAGA +
Preference number: 2 (lower is better)
Translates to: IGESEPALDIKVSLLSSDPTWQE*TETEHR
Trigger: TCTGTGCTCAGTTTCAGTTCACTCCTGCCAAGTTGG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp CGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTATCTTCACAAGCTCCTaGCTTTTTCTCCAGTGTCCC +
Preference number: 2 (lower is better)
Translates to: RMNSAIIGGCITAGLYLTIFTSS*LFLQCP
Trigger: GGGACACTGGAGAAAAAGTCAGGAGCTTGTGAAGAT...AGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp AGTCATGCCATCAATGTTTATCACAGTTTCTTGTGTCAGAGGCTGGCTAACTACACTTGGGCTGCTTTTTaGCAAATGCTGGAAAGCCCA +
Preference number: 2 (lower is better)
Translates to: SHAINVYHSFLCQRLANYTWAAF*QMLESP
Trigger: TGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGT...GTAGTTAGCCAGCCTCTGACACAAGAAACTGTGATAAACATTGATGGCATGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp GGGGGTGTGTCAAAGAAAGTAATAGGGTTCACTTTGGCTCTCTCATACATTGCAGGATTCTGGAGTGACTaGGCTTGCATTATACTTCAC +
Preference number: 2 (lower is better)
Translates to: GGVSKKVIGFTLALSYIAGFWSD*ACIILH
Trigger: GTGAAGTATAATGCAAGCTCAGTCACTCCAGAATCC...TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTACTTTCTTTGACACACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp GTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGTGTTCACTGTTACTTTCAGGCTGGAGGGAGAGTTTaGGGTACTCTCAACTTCACT +
Preference number: 2 (lower is better)
Translates to: VCNIWLWLFLEGVHCYFQAGGRV*GTLNFT
Trigger: AGTGAAGTTGAGAGTACCTCAAACTCTCCCTCCAGC...CTGAAAGTAACAGTGAACACCCTCTAGGAACAGCCATAACCAAATATTGCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp AAGGTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAAAGCGGCATTTCCGATaGAGGCTGAGCTATTACTAC +
Preference number: 2 (lower is better)
Translates to: KVSVSSSCLQYLVMAVPRKRHFR*RLSYYY
Trigger: GTAGTAATAGCTCAGCCTTCATCGGAAATGCCGCTT...TCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp GTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGTGTTCACTGTTACTTTCAGACCACTGGGGTTCCGTaGGTAATGGTTCCAGTCTTA +
Preference number: 2 (lower is better)
Translates to: VCNIWLWLFLEGVHCYFQTTGVP*VMVPVL
Trigger: TAAGACTGGAACCATTACTCACGGAACCCCAGTGGT...CTGAAAGTAACAGTGAACACCCTCTAGGAACAGCCATAACCAAATATTGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCTGGCTGTGTTCAACTaGTTGAGGTGGGTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAILAVFN*LRWVGG
Trigger: CCCTCCCACCCACCTCAAGCAGTTGAACACAGCCAG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp GACCCGTTCTGGTTAATGGAACCAGCAATCACTGTGCTGCCAGGTTTCTTAGCCCTAAAGAAACTACTATaGTGCTTACATATTGGAGTG +
Preference number: 2 (lower is better)
Translates to: DPFWLMEPAITVLPGFLALKKLL*CLHIGV
Trigger: CACTCCAATATGTAAGCAGCATAGTAGTTTCTTTAG...GGCTAAGAAACCTGGCAGCACAGTGATTGCTGGTTCCATTAACCAGAACGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGACACCCTCAATAGACTaGACACAGGAATTACAAGTC +
Preference number: 2 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGTPSID*TQELQV
Trigger: GACTTGTAATTCCTGTGTGCAGTCTATTGAGGGTGT...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp CCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAAGTCCCATTGCTATTTaGAAGGGAGACTCGTATGGA +
Preference number: 2 (lower is better)
Translates to: PNPSSRMNSAIIGGCITASPIAI*KGDSYG
Trigger: TCCATACGAGTCTCCCTTGCAAATAGCAATGGGACT...TGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp ATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTGCCTTGCCAGCCATCATTCCGTTCAATGTTTaGTACACAGGAAGCGCAAGT +
Preference number: 2 (lower is better)
Translates to: IGGCITAGLYLTSALPAIIPFNV*YTGSAS
Trigger: ACTTGCGCTTCCTGTGTAGCAAACATTGAACGGAAT...GATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp CACCTTTTATTAGTATGCCATTTTGAGCACCTACTCCTGTACCCACCATCACAGAAATGCAATGGTGGTTaGCAGCACAATCAGTACGTC +
Preference number: 2 (lower is better)
Translates to: HLLLVCHFEHLLLYPPSQKCNGG*QHNQYV
Trigger: GACGTACTGATTGTGCTGGCAACCACCATTGCATTT...CTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATACTAATAAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp AAGGTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAAGAAAGGGTTGTGTCTaGTCCAACATGTGTTGCGCA +
Preference number: 2 (lower is better)
Translates to: KVSVSSSCLQYLVMAVPRRKGCV*SNMCCA
Trigger: TGCGCAACACATGTTGGAGCAGACACAACCCTTTCT...TCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGCATGACAAGTTAAACTaGCAGCACTCTCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRHDKLN*QHSPWP
Trigger: AGGCCATGGAGAGTGCTGCCAGTTTAACTTGTCATG...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAGTCATTGCTCCCCAGTaGGGCAGGGATACAGGCTTG +
Preference number: 2 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAVIAPQ*GRDTGL
Trigger: CAAGCCTGTATCCCTGCCCCACTGGGGAGCAATGAC...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGGTCATTGCTCCCCAGTaGGGCAGGGATACAGGCTTG +
Preference number: 2 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLVIAPQ*GRDTGL
Trigger: CAAGCCTGTATCCCTGCCCCACTGGGGAGCAATGAC...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp CACCTTTTATTAGTATGCCATTTTGAGCACCTACTCCTGTACCCACCATCACAGAGAGGGTCAGGATTATaGATAACAGCATCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: HLLLVCHFEHLLLYPPSQRGSGL*ITASKP
Trigger: GGGCTTTGATGCTGTTATCCATAATCCTGACCCTCT...CTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATACTAATAAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp GAGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTTGTCTGTCACACCCTTaGTCTTCAGCAATGTGCTTT +
Preference number: 2 (lower is better)
Translates to: EDHTQQSHCYLQGRLVWICLSHP*SSAMCF
Trigger: AAAGCACATTGCTGAAGACCAAGGGTGTGACAGACA...AATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp CACCTTTTATTAGTATGCCATTTTGAGCACCTACTCCTGTACCCACCATCACAGGAACTCTGCTATCATTaGGGGTTGTATAACAGCAGG +
Preference number: 2 (lower is better)
Translates to: HLLLVCHFEHLLLYPPSQELCYH*GLYNSR
Trigger: CCTGCTGTTATACAACCCCCAATGATAGCAGAGTTC...CTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATACTAATAAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp CACAACCTGGAAATCTATGCAGGTACCCAAGGTTTCAGTGTCCAGCTCCTGTTTCATTTTCTATCACAGTaGCTCCAAATCCAAGTTCTC +
Preference number: 2 (lower is better)
Translates to: HNLEIYAGTQGFSVQLLFHFLSQ*LQIQVL
Trigger: GAGAACTTGGATTTGGAGCCACTGTGATAGAAAATG...AAACAGGAGCTGGACACTGAAACCTTGGGTACCTGCATAGATTTCCAGGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp GGGGGTGTGTCAAAGAAAGTAATAGGGTTCACTTTGGCTCTCTCATACATTGCAAATCCTGGAAGAATCTaGCGCTCCAGGAACATAGAA +
Preference number: 2 (lower is better)
Translates to: GGVSKKVIGFTLALSYIANPGRI*RSRNIE
Trigger: TTCTATGTTCCTGGAGCGCCAGATTCTTCCAGGATT...TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTACTTTCTTTGACACACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp AACGTTTCTGGAGAGGTTAGTAGAGGATCATACTCAACAGTCCCATaGCTATTTGCAAGGGAGACTCGTATGGATTTTACACCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: NVSGEVSRGSYSTVP*LFARETRMDFTPGF
Trigger: AAAGCCAGGTGTAAAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTCTACTAACCTCTCCAGAAACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp ATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTGCCTaGCCAGCCATCAGGGCCACAAGTATAGAATATATTCCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: IIGGCITAGLYLTSA*PAIRATSIEYIPSS
Trigger: GGAAGAAGGAATATATTCTATACTTGTGGCCCTGATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp TCTCTAGGACCAATAATTTCTGGGTCATATTTAATATGTGCTTTGTaGGTTGCCAGGGCCACGGAGCAGTATAGGATCCCTCTGTGTTTT +
Preference number: 2 (lower is better)
Translates to: SLGPIISGSYLICAL*VARATEQYRIPLCF
Trigger: AAAACACAGAGGGATCCTATACTGCTCCGTGGCCCTGGCAACCAACAAAGCACATATTAAATATGACCCAGAAATTATTGGTCCTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp ATATCTCTAGGACCAATAATTTCTGGGTCATATTTAATATGTGCTTaGTTGGTTGCCAGGGCCACGGAGCAGTATAGGATCCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: ISLGPIISGSYLICA*LVARATEQYRIPLC
Trigger: ACACAGAGGGATCCTATACTGCTCCGTGGCCCTGGCAACCAACAAAGCACATATTAAATATGACCCAGAAATTATTGGTCCTAGAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTGTGAAGGTAACATCATaGATGCTGTGTCAGTGCATG +
Preference number: 2 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAVKVTS*MLCQCM
Trigger: CATGCACTGACACAGCATTCATGATGTTACCTTCAC...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAGCTACTCAGGAGGCTaGGGCAGGGAGAATTCCTTG +
Preference number: 2 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRSYSGG*GRENSL
Trigger: CAAGGAATTCTCCCTGCCTCAGCCTCCTGAGTAGCT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCACTGTCCCACAATATaGATACAAGACCAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVHCPTI*IQDQED
Trigger: ATCCTCTTGGTCTTGTATTCATATTGTGGGACAGTG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp TGGTTCCAGTCTTATCAAATACCACTACCTTTACCTTATGAGCCATCTCCAATGATCCAAGTTCTCGGATaGACTCTGCTATCATTGGGG +
Preference number: 2 (lower is better)
Translates to: WFQSYQIPLPLPYEPSPMIQVLG*TLLSLG
Trigger: CCCCAATGATAGCAGAGTTCATCCGAGAACTTGGAT...CATTGGAGATGGCTCATAAGGTAAAGGTAGTGGTATTTGATAAGACTGGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp GTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGTGTTCACTGTTACTTTCAGGTTAGAACCTTTACTTaGTTCACCACTGGGGTTCCG +
Preference number: 2 (lower is better)
Translates to: VCNIWLWLFLEGVHCYFQVRTFT*FTTGVP
Trigger: CGGAACCCCAGTGGTGAATCAAGTAAAGGTTCTAAC...CTGAAAGTAACAGTGAACACCCTCTAGGAACAGCCATAACCAAATATTGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp GTTGCAAAGTGGTGGTCCATAACCATCATATATATCATCAGCCCCATTACAGGAACTCAACAGTCCCATTaGTATTTGCAAGGGAGACTC +
Preference number: 2 (lower is better)
Translates to: VAKWWSITIIYIISPITGTQQSH*YLQGRL
Trigger: GAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGT...TCCTGTAATGGGGCTGATGATATATATGATGGTTATGGACCACCACTTTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCTATGTGCCAGATGTTaGGTTAGCAGCAGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: IGESEPALDIKVSLLSSDLCARC*VSSSFA
Trigger: AGCAAAGCTGCTGCTAACCCAACATCTGGCACATAG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp CACCTTTTATTAGTATGCCATTTTGAGCACCTACTCCTGTACCCACCATCACAGAATGTGCTTTGGATATaGTCCCATGGCAAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: HLLLVCHFEHLLLYPPSQNVLWI*SHGKVS
Trigger: ACTGACTTTGCCATGGGACCATATCCAAAGCACATT...CTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATACTAATAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp CCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCATTCAGCAATGTGCTTTaGATATGGTCCCATGGCAAA +
Preference number: 2 (lower is better)
Translates to: PNPSSRMNSAIIGGCITAFSNVL*IWSHGK
Trigger: TTTGCCATGGGACCATATCCAAAGCACATTGCTGAA...TGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp AGGATCCCTCTGTGTTTTGTGAGACTAGACTCTATTTTATGTACGCAGGAGGCATCTTGTGTCAGAGGCTaGCTAACTACATTCAAAGGA +
Preference number: 2 (lower is better)
Translates to: RIPLCFVRLDSILCTQEASCVRG*LTTFKG
Trigger: TCCTTTGAATGTAGTTAGCCAGCCTCTGACACAAGA...TGCCTCCTGCGTACATAAAATAGAGTCTAGTCTCACAAAACACAGAGGGATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp GTGTTCTTTAGACGTTCTACATCAATAGCTCCCAATTTGAGGTACTaGGGCTGCTTTTTGACAAATGCTGGAAAGCCCATAGCTTCAATC +
Preference number: 2 (lower is better)
Translates to: VFFRRSTSIAPNLRY*GCFLTNAGKPIASI
Trigger: GATTGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGATGTAGAACGTCTAAAGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp AGGCAAATGCAATGGTGGTTGCCAGCACAATCAGTACGTCCATATTaGCTGTCTTATGCTTCAGTGCTTTATAAGCCTGAATGTAGAAGT +
Preference number: 2 (lower is better)
Translates to: RQMQWWLPAQSVRPY*LSYASVLYKPECRS
Trigger: ACTTCTACATTCAGGCTTATAAAGCACTGAAGCATAAGACAGCAAATATGGACGTACTGATTGTGCTGGCAACCACCATTGCATTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTTATACACAGTGCTTTaGAAGTCATTGCTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRLYTVL*KSLLPS
Trigger: ACTGGGGAGCAATGACTTTCAAAGCACTGTGTATAA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp ATGACAAGACCATTTCTAATCATCCACTCCCGGTTACCAATGAGGACTTTATACTCCCAGTATCTAAACTaGGTTCTGGAACCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: MTRPFLIIHSRLPMRTLYSQYLN*VLEPAL
Trigger: AAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGA...GTATAAAGTCCTCATTGGTAACCGGGAGTGGATGATTAGAAATGGTCTTGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp ATGACAAGACCATTTCTAATCATCCACTCCCGGTTACCAATGAGGACTTTATACTCAGGGATTCTGGAGTaGCTGAGCTTGCATTATACT +
Preference number: 2 (lower is better)
Translates to: MTRPFLIIHSRLPMRTLYSGILE*LSLHYT
Trigger: AGTATAATGCAAGCTCAGTCACTCCAGAATCCCTGA...GTATAAAGTCCTCATTGGTAACCGGGAGTGGATGATTAGAAATGGTCTTGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATGCTTTGAAAGTCATTaGTCCCCAGTGGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: CKPIDISVKWVCLSRLIACFESH*SPVGQG
Trigger: TCCCTGCCCCACTGGGGAGCAATGACTTTCAAAGCA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTTCAATACTACAAGCTaGTATTCCCACTGTCCCACA +
Preference number: 2 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRFNTTS*YSHCPT
Trigger: TGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp AAATTAACTTTGCAAGAGCCTCTGATGTTTTGCCCTTTGCTATATGTTCCAGCCTCCCATGTCTTCTATTaGTCCTCTCAACGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: KLTLQEPLMFCPLLYVPASHVFY*SSQRFW
Trigger: CCAGAAACGTTGAGAGGAGCAATAGAAGACATGGGA...GGCTGGAACATATAGCAAAGGGCAAAACATCAGAGGCTCTTGCAAAGTTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp AGCAAATCGTATTATCGTTTCTGTTCGGGAGATACTTCTATTGTAGCCAGGAAAGTGCTAGTACATGAATaGCAGGTCATCCCTTCCACT +
Preference number: 2 (lower is better)
Translates to: SKSYYRFCSGDTSIVARKVLVHE*QVIPST
Trigger: AGTGGAAGGGATGACCTGCCATTCATGTACTAGCAC...TTTCCTGGCTACAATAGAAGTATCTCCCGAACAGAAACGATAATACGATTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp AAGGTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGACAAGGGAGACTCGTATaGATTTTACACCTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: KVSVSSSCLQYLVMAVPRQGRLV*ILHLAF
Trigger: AAAAGCCAGGTGTAAAATCCATACGAGTCTCCCTTG...TCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp CGTTCTACATCAATAGCTCCCAATTTGAGGTACTTGGGCTGCTTTTaGACAAATGCTGGAAAGCCCATAGCTTCAATCTGCTTTTTCATT +
Preference number: 2 (lower is better)
Translates to: RSTSIAPNLRYLGCF*TNAGKPIASICFFI
Trigger: AATGAAAAAGCAGATTGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGATGTAGAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp TTAACTGGTGTGTTCTTTAGACGTTCTACATCAATAGCTCCCAATTaGAGGTACTTGGGCTGCTTTTTGACAAATGCTGGAAAGCCCATA +
Preference number: 2 (lower is better)
Translates to: LTGVFFRRSTSIAPN*RYLGCFLTNAGKPI
Trigger: TATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGATGTAGAACGTCTAAAGAACACACCAGTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGCAGGGATACAGGCTTaGGAGTATCTTCAATATTTT +
Preference number: 2 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRAGIQA*EYLQYF
Trigger: AAAATATTGAAGATACTCTCAAGCCTGTATCCCTGC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGATATGCAAACCCATTaGTATTTCAGTGAAATGGGT +
Preference number: 2 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVDMQTH*YFSEMG
Trigger: ACCCATTTCACTGAAATATCAATGGGTTTGCATATC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp GAGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTACCAGCTCTTTTATCTaGTTGGCATTCACTATAGAA +
Preference number: 2 (lower is better)
Translates to: EDHTQQSHCYLQGRLVWITSSFI*LAFTIE
Trigger: TTCTATAGTGAATGCCAATCAGATAAAAGAGCTGGT...AATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp ACTGGAAATTTGCCTCCTGGAACTACTTTAATGATATCTCCACGTTGTACAAGTCTGACCGATCCTTCTTaGCCAAAGAAGCTTCAAAAC +
Preference number: 2 (lower is better)
Translates to: TGNLPPGTTLMISPRCTSLTDPS*PKKLQN
Trigger: GTTTTGAAGCTTCTTTGGTCAAGAAGGATCGGTCAG...ACTTGTACAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp GTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGTGTTCACTGTTACTTTCAGCCTCTTCCACAAGTTTaGCAATTTGAGAAAGGGTTG +
Preference number: 2 (lower is better)
Translates to: VCNIWLWLFLEGVHCYFQPLPQV*QFEKGL
Trigger: CAACCCTTTCTCAAATTGTCAAACTTGTGGAAGAGG...CTGAAAGTAACAGTGAACACCCTCTAGGAACAGCCATAACCAAATATTGCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp AGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTTAGGGATTATTGTCACTaGTACAGTTCTTTTCTGAGG +
Preference number: 2 (lower is better)
Translates to: RIILNSPIAICKGDSYGFRDYCH*YSSFLR
Trigger: CCTCAGAAAAGAACTGTAGCAGTGACAATAATCCCT...AAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp GTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGTGTTCACTGTTACTTTCAGTTGAGGTACTTGGGCTaGTTTTTGACAAATGCTGGA +
Preference number: 2 (lower is better)
Translates to: VCNIWLWLFLEGVHCYFQLRYLG*FLTNAG
Trigger: TCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAA...CTGAAAGTAACAGTGAACACCCTCTAGGAACAGCCATAACCAAATATTGCAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp AAATTAACTTTGCAAGAGCCTCTGATGTTTTGCCCTTTGCTATATGTTCCAGCCTTCTCGGATGAACTCTaGTATCATTGGGGGTTGTAT +
Preference number: 2 (lower is better)
Translates to: KLTLQEPLMFCPLLYVPAFSDEL*YHWGLY
Trigger: ATACAACCCCCAATGATAGCAGAGTTCATCCGAGAA...GGCTGGAACATATAGCAAAGGGCAAAACATCAGAGGCTCTTGCAAAGTTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAACAACAGTGGAAAGATaGGAGGCAGGGAACCCTACA +
Preference number: 2 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRTTVER*EAGNPT
Trigger: TGTAGGGTTCCCTGCCTCCCATCTTTCCACTGTTGT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGCGCACTTAAAGTTTTaGAAACATCTTGTCTACAGT +
Preference number: 2 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVAHLKF*KHLVYS
Trigger: ACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp GGGGGTGTGTCAAAGAAAGTAATAGGGTTCACTTTGGCTCTCTCATACATTGCATGGCTGTTGAATCATTaGTATATGATGGACTCCTTT +
Preference number: 2 (lower is better)
Translates to: GGVSKKVIGFTLALSYIAWLLNH*YMMDSF
Trigger: AAAGGAGTCCATCATATACCAATGATTCAACAGCCA...TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTACTTTCTTTGACACACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 90 bp GATTTACAATGCATGCCATCAATGATGAAAGTGGCTGTTGAATCATaGGTATATGATGGACTCCTTTGCTGTGACCCTTCTGAGGATTTA +
Preference number: 2 (lower is better)
Translates to: DLQCMPSMMKVAVES*VYDGLLCCDPSEDL
Trigger: TAAATCCTCAGAAGGGTCACAGCAAAGGAGTCCATCATATACCAATGATTCAACAGCCACTTTCATCATTGATGGCATGCATTGTAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTTCAGAGCTGATGCCTTaGAAAAGATATTTTTGCCAA +
Preference number: 2 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTASELMP*KRYFCQ
Trigger: TTGGCAAAAATATCTTTTTCAAGGCATCAGCTCTGA...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACGCAGGGATACAGGCTTaGGAGTATCTTCAATATTTT +
Preference number: 2 (lower is better)
Translates to: IGESEPALDIKVSLLSSDAGIQA*EYLQYF
Trigger: AAAATATTGAAGATACTCTCAAGCCTGTATCCCTGC...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGACACACCATACATCTTaGGACTACAATACTACTACT +
Preference number: 2 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRTHHTS*DYNTTT
Trigger: AGTAGTAGTATTGTAGTCTCAAGATGTATGGTGTGT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp AAATTAACTTTGCAAGAGCCTCTGATGTTTTGCCCTTTGCTATATGTTCCAGCCACAATAGTAGCTTCTTaGTTGTCCAGGGAGACTTTA +
Preference number: 2 (lower is better)
Translates to: KLTLQEPLMFCPLLYVPATIVAS*LSRETL
Trigger: TAAAGTCTCCCTGGACAATCAAGAAGCTACTATTGT...GGCTGGAACATATAGCAAAGGGCAAAACATCAGAGGCTCTTGCAAAGTTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTGTTGTAAACCTCACTaGTCTACCTTATCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRCCKPH*STLSVV
Trigger: AACAACAGATAAGGTAGAGCAGTGAGGTTTACAACA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATATGTTTTATACACAGTaGTTTGAAAGTCATTGCTCC +
Preference number: 2 (lower is better)
Translates to: KMGGREPYRPLRSFELQNMFYTQ*FESHCS
Trigger: GGAGCAATGACTTTCAAAGCACTGTGTATAAAACAT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp AGTCATGCCATCAATGTTTATCACAGTTTCTTGTGTCAGAGGCTGGCTAACTACCCCATAGCTTCAATCTaGTTTTTCATTTCCTCTACT +
Preference number: 2 (lower is better)
Translates to: SHAINVYHSFLCQRLANYPIASI*FFISST
Trigger: AGTAGAGGAAATGAAAAAGCAGATTGAAGCTATGGG...GTAGTTAGCCAGCCTCTGACACAAGAAACTGTGATAAACATTGATGGCATGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp ACTGGAAATTTGCCTCCTGGAACTACTTTAATGATATCTCCACGTTGTACAAGTCTGCTTTTTGACAAATaGTGGAAAGCCCATAGCTTC +
Preference number: 2 (lower is better)
Translates to: TGNLPPGTTLMISPRCTSLLFDK*WKAHSF
Trigger: GAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAG...ACTTGTACAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCTATGTGCCAGATGTTaGGTTAGCAGCAGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLLCARC*VSSSFA
Trigger: AGCAAAGCTGCTGCTAACCCAACATCTGGCACATAG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTATTTAAGTTTAAGGTaGCACATAGGTGAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRYLSLR*HIGESE
Trigger: TTCAGACTCACCTATGTGGCACCTTAAACTTAAATA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp AGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTTATGCTGCTTACATATTaGAGTGCAGATAAAGTACTT +
Preference number: 2 (lower is better)
Translates to: RIILNSPIAICKGDSYGFMLLTY*SADKVL
Trigger: AAGTACTTTATCTGCACTCCAATATGTAAGCAGCAT...AAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCACTGTCCCACAATATaGATACAAGACCAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIHCPTI*IQDQED
Trigger: ATCCTCTTGGTCTTGTATTCATATTGTGGGACAGTG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGTTCAATACTACAAGCTaGTATTCCCACTGTCCCACA +
Preference number: 2 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLFNTTS*YSHCPT
Trigger: TGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAA...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp ACTGGAAATTTGCCTCCTGGAACTACTTTAATGATATCTCCACGTTGTACAAGTAGAGTTGCAAAGTGGTaGTCCATAACCATCATATAT +
Preference number: 2 (lower is better)
Translates to: TGNLPPGTTLMISPRCTSRVAKW*SITIIY
Trigger: ATATATGATGGTTATGGACCACCACTTTGCAACTCT...ACTTGTACAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAGATATGCAAACCCATTaGTATTTCAGTGAAATGGGT +
Preference number: 2 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRDMQTH*YFSEMG
Trigger: ACCCATTTCACTGAAATATCAATGGGTTTGCATATC...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTACACACCATACATCTTaGGACTACAATACTACTACT +
Preference number: 2 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAITHHTS*DYNTTT
Trigger: AGTAGTAGTATTGTAGTCTCAAGATGTATGGTGTGT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATGTTGTAAACCTCACTaGTCTACCTTATCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRCCKPH*STLSVV
Trigger: AACAACAGATAAGGTAGAGCAGTGAGGTTTACAACA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp TCAGAAATCCAATTACAATCCATACCAAGAGGGTGGCAATGGAAACAAAAACAACATTATACTTCACAATaGCAGACCTATTCTCTAAAG +
Preference number: 2 (lower is better)
Translates to: SEIQLQSIPRGWQWKQKQHYTSQ*QTYSLK
Trigger: CTTTAGAGAATAGGTCTGCCATTGTGAAGTATAATG...TTGTTTTTGTTTCCATTGCCACCCTCTTGGTATGGATTGTAATTGGATTTCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTATTTAAGTTTAAGGTaGCACATAGGTGAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIYLSLR*HIGESE
Trigger: TTCAGACTCACCTATGTGGCACCTTAAACTTAAATA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGAAATCCATTTGGCAATaGGAACAAGCTCCTAAATTT +
Preference number: 2 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLKSIWQ*EQAPKF
Trigger: AAATTTAGGAGCTTGTTCCCATTGCCAAATGGATTT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAAATCCATTTGGCAATaGGAACAAGCTCCTAAATTT +
Preference number: 2 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAKSIWQ*EQAPKF
Trigger: AAATTTAGGAGCTTGTTCCCATTGCCAAATGGATTT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp CCCACCATCACAGCAGTTGGAGTGGCCAGTCCCAGTGAACAGGGACATGCAATAATGTCTGTCACACCCTaGGTCTTCAGCAATGTGCTT +
Preference number: 3 (lower is better)
Translates to: PTITAVGVASPSEQGHAIMSVTP*VFSNVL
Trigger: AAGCACATTGCTGAAGACCAAGGGTGTGACAGACAT...TATTGCATGTCCCTGTTCACTGGGACTGGCCACTCCAACTGCTGTGATGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp CCCACCATCACAGCAGTTGGAGTGGCCAGTCCCAGTGAACAGGGACATGCAATAAATTCCGTTCAATGTTaGCTACACAGGAAGCGCAAG +
Preference number: 3 (lower is better)
Translates to: PTITAVGVASPSEQGHAINSVQC*LHRKRK
Trigger: CTTGCGCTTCCTGTGTAGCAAACATTGAACGGAATT...TATTGCATGTCCCTGTTCACTGGGACTGGCCACTCCAACTGCTGTGATGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 72 bp GTCACACCCTTGGTCTTCAGCAATGTGCTTTGGATATaGTCCCATGGCAAAGTCAGTGACGCCGTAACAGTC +
Preference number: 3 (lower is better)
Translates to: VTPLVFSNVLWI*SHGKVSDAVTV
Trigger: GACTGTTACGGCGTCACTGACTTTGCCATGGGACCATATCCAAAGCACATTGCTGAAGACCAAGGGTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 72 bp CCAACATGTGTTGCGCAGATAAGCAGTGACCCGTTCTaGTTAATGGAACCAGCAATCACTGTGCTGCCAGGT +
Preference number: 3 (lower is better)
Translates to: PTCVAQISSDPF*LMEPAITVLPG
Trigger: ACCTGGCAGCACAGTGATTGCTGGTTCCATTAACCAGAACGGGTCACTGCTTATCTGCGCAACACATGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGCTGTGTTCAACTGCTaGAGGTGGGTGGGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVAVFNC*RWVGGR
Trigger: TCTCCCTCCCACCCACCTCAAGCAGTTGAACACAGC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp CCCACCATCACAGCAGTTGGAGTGGCCAGTCCCAGTGAACAGGGACATGCAATAAATGATATCTCCACGTaGTACAAGTTCCACATCCAC +
Preference number: 3 (lower is better)
Translates to: PTITAVGVASPSEQGHAINDIST*YKFHIH
Trigger: GTGGATGTGGAACTTGTACAACGTGGAGATATCATT...TATTGCATGTCCCTGTTCACTGGGACTGGCCACTCCAACTGCTGTGATGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGCTGTGTTCAACTGCTaGAGGTGGGTGGGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRAVFNC*RWVGGR
Trigger: TCTCCCTCCCACCCACCTCAAGCAGTTGAACACAGC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGCAGTCCCATTGCTATTaGCAAGGGAGACTCGTATGG +
Preference number: 3 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGQSHCY*QGRLVW
Trigger: CCATACGAGTCTCCCTTGCAAATAGCAATGGGACTG...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 72 bp TGTGTCTGCTCCAACATGTGTTGCGCAGATAAGCAGTaGCCCGTTCTGGTTAATGGAACCAGCAATCACTGT +
Preference number: 3 (lower is better)
Translates to: CVCSNMCCADKQ*PVLVNGTSNHC
Trigger: ACAGTGATTGCTGGTTCCATTAACCAGAACGGGTCACTGCTTATCTGCGCAACACATGTTGGAGCAGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGGCAGGGAGAATTCCTaGAATCCGGTAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRGRENS*NPVGRG
Trigger: ACCTCTGCCTACCGGATTCAAGGAATTCTCCCTGCC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp GACCCGTTCTGGTTAATGGAACCAGCAATCACTGTGCTGCCAGGTTTCTTAGCCGTGGCTGTTGAATCATaGGTATATGATGGACTCCTT +
Preference number: 3 (lower is better)
Translates to: DPFWLMEPAITVLPGFLAVAVES*VYDGLL
Trigger: AAGGAGTCCATCATATACCAATGATTCAACAGCCAC...GGCTAAGAAACCTGGCAGCACAGTGATTGCTGGTTCCATTAACCAGAACGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp CCCACCATCACAGCAGTTGGAGTGGCCAGTCCCAGTGAACAGGGACATGCAATAAACTGTGATAGAGGCTaGGAAAGCAAATCGTATTAT +
Preference number: 3 (lower is better)
Translates to: PTITAVGVASPSEQGHAINCDRG*ESKSYY
Trigger: ATAATACGATTTGCTTTCCAAGCCTCTATCACAGTT...TATTGCATGTCCCTGTTCACTGGGACTGGCCACTCCAACTGCTGTGATGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGAGTCATGATAATTGCTaGAACCCAGGAGCCAGAGGT +
Preference number: 3 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVSHDNC*NPGARG
Trigger: ACCTCTGGCTCCTGGGTTCAAGCAATTATCATGACT...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
3UTR-3UTR CAA 90 bp ATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTGCCTTGCCAGCCATCTACTTGGGCTGCTTTTaGACAAATGCTGGAAAGCCC +
Preference number: 3 (lower is better)
Translates to: IGGCITAGLYLTSALPAIYLGCF*TNAGKP
Trigger: GGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTA...GATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGGGTTAGCAGCAGCTTaGCTTCTGGTAATGGGAACA +
Preference number: 3 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRGLAAA*LLVMGT
Trigger: TGTTCCCATTACCAGAAGCAAAGCTGCTGCTAACCC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp AGGATCCCTCTGTGTTTTGTGAGACTAGACTCTATTTTATGTACGCAGGAGGCACTTCAGCAATGTGCTTaGGATATGGTCCCATGGCAA +
Preference number: 3 (lower is better)
Translates to: RIPLCFVRLDSILCTQEALQQCA*DMVPWQ
Trigger: TTGCCATGGGACCATATCCAAAGCACATTGCTGAAG...TGCCTCCTGCGTACATAAAATAGAGTCTAGTCTCACAAAACACAGAGGGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp CCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCACACGACTTCACCAGCTaGAGCCATACTATGATCTTC +
Preference number: 3 (lower is better)
Translates to: PNPSSRMNSAIIGGCITAHDFTS*SHTMIF
Trigger: GAAGATCATAGTATGGCTCAAGCTGGTGAAGTCGTG...TGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp AGCAAATCGTATTATCGTTTCTGTTCGGGAGATACTTCTATTGTAGCCAGGAAATATGTGCTTTGTTGGTaGCCAGGGCCACGGAGCAGT +
Preference number: 3 (lower is better)
Translates to: SKSYYRFCSGDTSIVARKYVLCW*PGPRSS
Trigger: ACTGCTCCGTGGCCCTGGCAACCAACAAAGCACATA...TTTCCTGGCTACAATAGAAGTATCTCCCGAACAGAAACGATAATACGATTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 72 bp TTAGTTGAAGTCAAAAGCGGCATTTCCGATGAAGGCTaGGCTATTACTACCAACGGCTCATTCGTGTCTGAC +
Preference number: 3 (lower is better)
Translates to: LVEVKSGISDEG*AITTNGSFVSD
Trigger: GTCAGACACGAATGAGCCGTTGGTAGTAATAGCTCAGCCTTCATCGGAAATGCCGCTTTTGACTTCAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 72 bp TCCAATGGCTCTCCACCTTTTATTAGTATGCCATTTTaGGCACCTACTCCTGTACCCACCATCACAGCAGTT +
Preference number: 3 (lower is better)
Translates to: SNGSPPFISMPF*APTPVPTITAV
Trigger: AACTGCTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATACTAATAAAAGGTGGAGAGCCATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 72 bp TGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTaGCTTGCCAGCCATCAGGGCCACAAGTATAGAATA +
Preference number: 3 (lower is better)
Translates to: WGLYNSRIIPYF*LASHQGHKYRI
Trigger: TATTCTATACTTGTGGCCCTGATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp AGGATCCCTCTGTGTTTTGTGAGACTAGACTCTATTTTATGTACGCAGGAGGCATACTCAACAGTCCCATaGCTATTTGCAAGGGAGACT +
Preference number: 3 (lower is better)
Translates to: RIPLCFVRLDSILCTQEAYSTVP*LFARET
Trigger: AGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTA...TGCCTCCTGCGTACATAAAATAGAGTCTAGTCTCACAAAACACAGAGGGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp CACCTTTTATTAGTATGCCATTTTGAGCACCTACTCCTGTACCCACCATCACAGCCATCCACTGGAAATTaGCCTCCTGGAACTACTTTA +
Preference number: 3 (lower is better)
Translates to: HLLLVCHFEHLLLYPPSQPSTGN*PPGTTL
Trigger: TAAAGTAGTTCCAGGAGGCAAATTTCCAGTGGATGG...CTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATACTAATAAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 72 bp CACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTaGTATCATTGGGGGTTGTATAACAGCAGGATTATA +
Preference number: 3 (lower is better)
Translates to: HSGSKSKFSDEL*YHWGLYNSRII
Trigger: TATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 72 bp TTTATACACAGTGCTTTGAAAGTCATTGCTCCCCAGTaGGGCAGGGATACAGGCTTGAGAGTATCTTCAATA +
Preference number: 3 (lower is better)
Translates to: FIHSALKVIAPQ*GRDTGLRVSSI
Trigger: TATTGAAGATACTCTCAAGCCTGTATCCCTGCCCCACTGGGGAGCAATGACTTTCAAAGCACTGTGTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR CCA 72 bp CAGGGACATGCAATACACAGAACTGTGATAGAGGCTTaGAAAGCAAATCGTATTATCGTTTCTGTTCGGGAG +
Preference number: 3 (lower is better)
Translates to: QGHAIHRTVIEA*KANRIIVSVRE
Trigger: CTCCCGAACAGAAACGATAATACGATTTGCTTTCCAAGCCTCTATCACAGTTCTGTGTATTGCATGTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGGCAGGGATACAGGCTaGAGAGTATCTTCAATATTT +
Preference number: 3 (lower is better)
Translates to: KMGGREPYRPLRSFELQNGRDTG*RVSSIF
Trigger: AAATATTGAAGATACTCTCAAGCCTGTATCCCTGCC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAGGCAGGGAGAATTCCTaGAATCCGGTAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRGRENS*NPVGRG
Trigger: ACCTCTGCCTACCGGATTCAAGGAATTCTCCCTGCC...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAGACTAAGGGCATGGTaGCTGAGTGAATACAGAAGA +
Preference number: 3 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRRLRAW*LSEYRR
Trigger: TCTTCTGTATTCACTCAGCAACCATGCCCTTAGTCT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp CGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTGTTTATCACAGTTTCTaGTGTCAGAGGCTGGCTAAC +
Preference number: 3 (lower is better)
Translates to: RMNSAIIGGCITAGLYLTVYHSF*CQRLAN
Trigger: GTTAGCCAGCCTCTGACACAAGAAACTGTGATAAAC...AGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 72 bp AATACTACAAGCTGCTATTCCCACTGTCCCACAATATaGATACAAGACCAAGAGGATGACTCCAAGGTACAC +
Preference number: 3 (lower is better)
Translates to: NTTSCYSHCPTI*IQDQEDDSKVH
Trigger: GTGTACCTTGGAGTCATCCTCTTGGTCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR GCA 72 bp TCTACATCAATAGCTCCCAATTTGAGGTACTTGGGCTaGTTTTTGACAAATGCTGGAAAGCCCATAGCTTCA +
Preference number: 3 (lower is better)
Translates to: STSIAPNLRYLG*FLTNAGKPIAS
Trigger: TGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGATGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 72 bp GAGAGGTTAGTAGAGGATCATACTCAACAGTCCCATTaGTATTTGCAAGGGAGACTCGTATGGATTTTACAC +
Preference number: 3 (lower is better)
Translates to: ERLVEDHTQQSH*YLQGRLVWILH
Trigger: GTGTAAAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTCTACTAACCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 72 bp GGCACTCACAAGGGAATTTCTAAATCCATTTGGCAATaGGAACAAGCTCCTAAATTTGCCAACCACACTAAC +
Preference number: 3 (lower is better)
Translates to: GTHKGISKSIWQ*EQAPKFANHTN
Trigger: GTTAGTGTGGTTGGCAAATTTAGGAGCTTGTTCCCATTGCCAAATGGATTTAGAAATTCCCTTGTGAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR CCA 72 bp TTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATaGCTGTTCCTAGAGGGTGTTCACTGTTACTTTCAG +
Preference number: 3 (lower is better)
Translates to: FQCPAPVCNIWL*LFLEGVHCYFQ
Trigger: CTGAAAGTAACAGTGAACACCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAACAAGCTCCTAAATTaGCCAACCACACTAACTAGG +
Preference number: 3 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRNKLLN*PTTLTR
Trigger: CCTAGTTAGTGTGGTTGGCAAATTTAGGAGCTTGTT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp GTTGCAAAGTGGTGGTCCATAACCATCATATATATCATCAGCCCCATTACAGGACCCAATTTGAGGTACTaGGGCTGCTTTTTGACAAAT +
Preference number: 3 (lower is better)
Translates to: VAKWWSITIIYIISPITGPNLRY*GCFLTN
Trigger: ATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGG...TCCTGTAATGGGGCTGATGATATATATGATGGTTATGGACCACCACTTTGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp TGGTTCCAGTCTTATCAAATACCACTACCTTTACCTTATGAGCCATCTCCAATGGTGATACAGCCTCTATaGCTTTTCTCAGGGATTCTG +
Preference number: 3 (lower is better)
Translates to: WFQSYQIPLPLPYEPSPMVIQPL*LFSGIL
Trigger: CAGAATCCCTGAGAAAAGCAATAGAGGCTGTATCAC...CATTGGAGATGGCTCATAAGGTAAAGGTAGTGGTATTTGATAAGACTGGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp GTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGTGTTCACTGTTACTTTCAGCTGATGTTTTGCCCTTaGCTATATGTTCCAGCCATC +
Preference number: 3 (lower is better)
Translates to: VCNIWLWLFLEGVHCYFQLMFCP*LYVPAI
Trigger: GATGGCTGGAACATATAGCAAAGGGCAAAACATCAG...CTGAAAGTAACAGTGAACACCCTCTAGGAACAGCCATAACCAAATATTGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 72 bp TCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTaGGGGTTGTATAACAGCAGGATTATACCTTACTTC +
Preference number: 3 (lower is better)
Translates to: SKSKFSDELCYH*GLYNSRIIPYF
Trigger: GAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAGGGTTAGCAGCAGCTTaGCTTCTGGTAATGGGAACA +
Preference number: 3 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAGLAAA*LLVMGT
Trigger: TGTTCCCATTACCAGAAGCAAAGCTGCTGCTAACCC...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp TGGTTCCAGTCTTATCAAATACCACTACCTTTACCTTATGAGCCATCTCCAATGAATTCGCTGAACACCTaGCAGTTTCCCAATTTTTCC +
Preference number: 3 (lower is better)
Translates to: WFQSYQIPLPLPYEPSPMNSLNT*QFPNFS
Trigger: GGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT...CATTGGAGATGGCTCATAAGGTAAAGGTAGTGGTATTTGATAAGACTGGAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp TGGTTCCAGTCTTATCAAATACCACTACCTTTACCTTATGAGCCATCTCCAATGCACAAGTTTGACAATTaGAGAAAGGGTTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: WFQSYQIPLPLPYEPSPMHKFDN*RKGCVC
Trigger: GCAGACACAACCCTTTCTCAAATTGTCAAACTTGTG...CATTGGAGATGGCTCATAAGGTAAAGGTAGTGGTATTTGATAAGACTGGAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCTGAAAGCAGTATTTTaGATTCCCTCCATAATCACC +
Preference number: 3 (lower is better)
Translates to: IGESEPALDIKVSLLSSDLKAVF*IPSIIT
Trigger: GGTGATTATGGAGGGAATCAAAAATACTGCTTTCAG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp TCAGAAATCCAATTACAATCCATACCAAGAGGGTGGCAATGGAAACAAAAACAATCAATAGCTCCCAATTaGAGGTACTTGGGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: SEIQLQSIPRGWQWKQKQSIAPN*RYLGCF
Trigger: AAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGA...TTGTTTTTGTTTCCATTGCCACCCTCTTGGTATGGATTGTAATTGGATTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp TCAGAAATCCAATTACAATCCATACCAAGAGGGTGGCAATGGAAACAAAAACAAATCCCATGTCTTCTATaGCTCCTCTCAACGTTTCTG +
Preference number: 3 (lower is better)
Translates to: SEIQLQSIPRGWQWKQKQIPCLL*LLSTFL
Trigger: CAGAAACGTTGAGAGGAGCAATAGAAGACATGGGAT...TTGTTTTTGTTTCCATTGCCACCCTCTTGGTATGGATTGTAATTGGATTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CCA 72 bp CAATTTGAGGTACTTGGGCTGCTTTTTGACAAATGCTaGAAAGCCCATAGCTTCAATCTGCTTTTTCATTTC +
Preference number: 3 (lower is better)
Translates to: QFEVLGLLFDKC*KAHSFNLLFHF
Trigger: GAAATGAAAAAGCAGATTGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp ATGACAAGACCATTTCTAATCATCCACTCCCGGTTACCAATGAGGACTTTATACATTACTGGCATCAATTaGAACCAGGGATGCATTTTT +
Preference number: 3 (lower is better)
Translates to: MTRPFLIIHSRLPMRTLYITGIN*NQGCIF
Trigger: AAAAATGCATCCCTGGTTCAAATTGATGCCAGTAAT...GTATAAAGTCCTCATTGGTAACCGGGAGTGGATGATTAGAAATGGTCTTGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 72 bp GTTTATGATCTAAGTGACTTGCTGACCGATCCTTCTTaGCCAAAGAAGCTTCAAAACCTAAGCTTTCAATTG +
Preference number: 3 (lower is better)
Translates to: VYDLSDLLTDPS*PKKLQNLSFQL
Trigger: CAATTGAAAGCTTAGGTTTTGAAGCTTCTTTGGTCAAGAAGGATCGGTCAGCAAGTCACTTAGATCATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 72 bp AACTACAGTAGATGGATATTGCACAACATCGTCCACTaGTGTTTTCGGTACCAAACAATCAATGTTCAACAA +
Preference number: 3 (lower is better)
Translates to: NYSRWILHNIVH*CFRYQTINVQQ
Trigger: TTGTTGAACATTGATTGTTTGGTACCGAAAACAGCAGTGGACGATGTTGTGCAATATCCATCTACTGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR CCA 72 bp TACCATAGAATGTCCTTCAATAACACGACCATCCACTaGAAATTTGCCTCCTGGAACTACTTTAATGATATC +
Preference number: 3 (lower is better)
Translates to: YHRMSFNNTTIH*KFASWNYFNDI
Trigger: GATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGTGGATGGTCGTGTTATTGAAGGACATTCTATGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTGGCAGGGATACAGGCTaGAGAGTATCTTCAATATTT +
Preference number: 3 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIGRDTG*RVSSIF
Trigger: AAATATTGAAGATACTCTCAAGCCTGTATCCCTGCC...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTTTATACACAGTGCTTaGAAAGTCATTGCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIFIHSA*KVIAPQ
Trigger: CTGGGGAGCAATGACTTTCAAAGCACTGTGTATAAA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp TCAGAAATCCAATTACAATCCATACCAAGAGGGTGGCAATGGAAACAAAAACAATGCTATCATTGGGGGTaGTATAACAGCAGGATTATA +
Preference number: 3 (lower is better)
Translates to: SEIQLQSIPRGWQWKQKQCYHWG*YNSRII
Trigger: TATAATCCTGCTGTTATACAACCCCCAATGATAGCA...TTGTTTTTGTTTCCATTGCCACCCTCTTGGTATGGATTGTAATTGGATTTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 72 bp GTATCTAAACTGAGTTCTGGAACCAGCTCTTTTATCTaGTTGGCATTCACTATAGAAGGGATTATTGTCACT +
Preference number: 3 (lower is better)
Translates to: VSKLSSGTSSFI*LAFTIEGIIVT
Trigger: AGTGACAATAATCCCTTCTATAGTGAATGCCAATCAGATAAAAGAGCTGGTTCCAGAACTCAGTTTAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR TCA 72 bp GCCCATAGCTTCAATCTGCTTTTTCATTTCCTCTACTaGGATAAGATGAGGTTGATAAACAATAGTAGCTTC +
Preference number: 3 (lower is better)
Translates to: AHSFNLLFHFLY*DKMRLINNSSF
Trigger: GAAGCTACTATTGTTTATCAACCTCATCTTATCTCAGTAGAGGAAATGAAAAAGCAGATTGAAGCTATGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTGACACACCATACATCTaGAGACTACAATACTACTAC +
Preference number: 3 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIDTPYI*RLQYYY
Trigger: GTAGTAGTATTGTAGTCTCAAGATGTATGGTGTGTC...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGTGCGCACTTAAAGTTTaGGAAACATCTTGTCTACAG +
Preference number: 3 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLCALKV*ETSCLQ
Trigger: CTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCA...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTCTAGAAGAAACAAGTaGTATTATAAGATGGGCCAC +
Preference number: 3 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAISRRNK*YYKMGH
Trigger: GTGGCCCATCTTATAATACAACTTGTTTCTTCTAGA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR TCA 72 bp GACGAAGTTGATGACTGTTCATTACTGGCATCAATTTaGACCAGGGATGCATTTTTAATATTATTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: DEVDDCSLLASI*TRDAFLILLSS
Trigger: AGAGGACAATAATATTAAAAATGCATCCCTGGTTCAAATTGATGCCAGTAATGAACAGTCATCAACTTCGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR GCA 72 bp GCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTaGTCTACCTTATCTGTTGTTAGTGAAAACAAAAAT +
Preference number: 3 (lower is better)
Translates to: AISNCRACCKPH*STLSVVSENKN
Trigger: ATTTTTGTTTTCACTAACAACAGATAAGGTAGAGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCACAGTAGCTGCGGCTaGGGCGGCGGCAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVHSSCG*GGGSNN
Trigger: GTTGTTGCTGCCGCCGCCGCAGCCGCAGCTACTGTG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATAGAAGTCACAGTAGCTaGGGCTGCGGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNRSHSS*GCGGGS
Trigger: GCTGCCGCCGCCGCAGCCGCAGCTACTGTGACTTCT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGTTCCGCTGCTGCTCCTaGTCAAAACGGGCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVFRCCS*SKRAGL
Trigger: TAGGCCGGCCCGTTTTGAGCAGGAGCAGCAGCGGAA...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR CCA 90 bp CCCACCATCACAGCAGTTGGAGTGGCCAGTCCCAGTGAACAGGGACATGCAATATCACTGTGTCTGCAATaGCTATCAAGCCACACAGCT +
Preference number: 4 (lower is better)
Translates to: PTITAVGVASPSEQGHAISLCLQ*LSSHTA
Trigger: AGCTGTGTGGCTTGATAGCCATTGCAGACACAGTGA...TATTGCATGTCCCTGTTCACTGGGACTGGCCACTCCAACTGCTGTGATGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGCTACTGTTCCGCTGCTaGTCCTGCTCAAAACGGGCC +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVLLFRC*SCSKRA
Trigger: GGCCCGTTTTGAGCAGGAGCAGCAGCGGAACAGTAG...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR CCA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGCAGCCTGGCACAACCTaGAAATCTATGCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKQPGTT*KSMQVP
Trigger: GGGTACCTGCATAGATTTCCAGGTTGTGCCAGGCTG...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGGGTCTACTGTTCCGCTaGTGCTCCTGCTCAAAACGG +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVGLLFR*CSCSKR
Trigger: CCGTTTTGAGCAGGAGCAGCAGCGGAACAGTAGACC...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR TCA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGACTTGGGCTGCTTTTTaGCAAATGCTGGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKTWAAF*QMLESP
Trigger: TGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGT...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTCACAGCAGTTGGAGTaGCCAGTCCCAGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNSQQLE*PVPVNR
Trigger: CCTGTTCACTGGGACTGGCCACTCCAACTGCTGTGA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ACACGTCATTCCCCTCACAACAAGTTCCAAAACACCATCTCCTTCATCAGCATTTCACAGCAGTTGGAGTaGCCAGTCCCAGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: TRHSPHNKFQNTISFISISQQLE*PVPVNR
Trigger: CCTGTTCACTGGGACTGGCCACTCCAACTGCTGTGA...AATGCTGATGAAGGAGATGGTGTTTTGGAACTTGTTGTGAGGGGAATGACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCTCTTCTGTCCTATCTaGCTCCGGGCAGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNLFCPI*LRAGSS
Trigger: TGAACTGCCTGCCCGGAGCCAGATAGGACAGAAGAG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTGTCATTGCTCCCCAGTaGGGCAGGGATACAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAVIAPQ*GRDTGL
Trigger: CAAGCCTGTATCCCTGCCCCACTGGGGAGCAATGAC...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGGAGACTTTAATTCGCTaGACACCTTGCAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKETLIR*TPCSFP
Trigger: TGGGAAACTGCAAGGTGTTCAGCGAATTAAAGTCTC...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp GTCTTCAGCAATGTGCTTTGGATATGGTCCCATGGCAAAGTCAGTGACGCCGTATCAGGGATTCTGGAGTaGCTGAGCTTGCATTATACT +
Preference number: 4 (lower is better)
Translates to: VFSNVLWIWSHGKVSDAVSGILE*LSLHYT
Trigger: AGTATAATGCAAGCTCAGTCACTCCAGAATCCCTGA...TACGGCGTCACTGACTTTGCCATGGGACCATATCCAAAGCACATTGCTGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGATTTCCGATGAAGGCTaGGCTATTACTACCAACGGC +
Preference number: 4 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGISDEG*AITTNG
Trigger: GCCGTTGGTAGTAATAGCTCAGCCTTCATCGGAAAT...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGCCTTCCTCCTTGTCTTaGACTGGTGTCATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGPSSLS*TGVIPL
Trigger: TAAAGGGATGACACCAGTTCAAGACAAGGAGGAAGG...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGACTACCTTTACCTTATaGGCCATCTCCAATGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKTTFTL*AISNGS
Trigger: AGAGCCATTGGAGATGGCTCATAAGGTAAAGGTAGT...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGACCACTGGGGTTCCGTaGGTAATGGTTCCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGTTGVP*VMVPVL
Trigger: TAAGACTGGAACCATTACTCACGGAACCCCAGTGGT...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTGTCTCCCACCAGGAGTaGGTGCTTGTCAGGTTCACT +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAVSHQE*VLVRFT
Trigger: AGTGAACCTGACAAGCACTCACTCCTGGTGGGAGAC...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAGCTACTCAGGAGGCTaGGGCAGGGAGAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTASYSGG*GRENSL
Trigger: CAAGGAATTCTCCCTGCCTCAGCCTCCTGAGTAGCT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCACAGTAGCTGCGGCTaGGGCGGCGGCAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIHSSCG*GGGSNN
Trigger: GTTGTTGCTGCCGCCGCCGCAGCCGCAGCTACTGTG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAGAAGTCACAGTAGCTaGGGCTGCGGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIARSHSS*GCGGGS
Trigger: GCTGCCGCCGCCGCAGCCGCAGCTACTGTGACTTCT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ACACGTCATTCCCCTCACAACAAGTTCCAAAACACCATCTCCTTCATCAGCATTACCTTACTTCTGCCTTaGCAGCCATCAGGGCCACAA +
Preference number: 4 (lower is better)
Translates to: TRHSPHNKFQNTISFISITLLLP*QPSGPQ
Trigger: TTGTGGCCCTGATGGCTGGCAAGGCAGAAGTAAGGT...AATGCTGATGAAGGAGATGGTGTTTTGGAACTTGTTGTGAGGGGAATGACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATATGTGCTTTGTTGGTTaGCAGGGCCACGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNMCFVG*QGHGAV
Trigger: TACTGCTCCGTGGCCCTGGCAACCAACAAAGCACAT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGGCCACTGAGTTTGTCTaGAAACTGCTGGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGATEFV*KLLDRS
Trigger: GCTCCTATCCAGCAGTTTGCAGACAAACTCAGTGGC...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTCCATCTCCCACCATTaGTACCCGTTTCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRSISHH*YPFPLL
Trigger: GAGGAGGGGAAACGGGTAGCAATGGTGGGAGATGGA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTGCTTTGAAAGTCATTaGTCCCCAGTGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNCFESH*SPVGQG
Trigger: TCCCTGCCCCACTGGGGAGCAATGACTTTCAAAGCA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTCTGAAGAGATGAGCTaGAGGGAGAGTTTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGSEEMS*RESLRY
Trigger: GTACCTCAAACTCTCCCTCCAGCTCATCTCTTCAGA...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp GTCTTCAGCAATGTGCTTTGGATATGGTCCCATGGCAAAGTCAGTGACGCCGTACAGCAGTTCCCACAATaGCCAAGATTTTATGGTGTG +
Preference number: 4 (lower is better)
Translates to: VFSNVLWIWSHGKVSDAVQQFPQ*PRFYGV
Trigger: CACACCATAAAATCTTGGCCATTGTGGGAACTGCTG...TACGGCGTCACTGACTTTGCCATGGGACCATATCCAAAGCACATTGCTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp GAGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTCCATGGCAAAGTCAGTaGCGCCGTAACAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: EDHTQQSHCYLQGRLVWIPWQSQ*RRNSQK
Trigger: TTTCTGACTGTTACGGCGTCACTGACTTTGCCATGG...AATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp ACACGTCATTCCCCTCACAACAAGTTCCAAAACACCATCTCCTTCATCAGCATTGCTGGAGGGAGAGTTTaGGGTACTCTCAACTTCACT +
Preference number: 4 (lower is better)
Translates to: TRHSPHNKFQNTISFISIAGGRV*GTLNFT
Trigger: AGTGAAGTTGAGAGTACCTCAAACTCTCCCTCCAGC...AATGCTGATGAAGGAGATGGTGTTTTGGAACTTGTTGTGAGGGGAATGACGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCTGGATAGGAGCCTTTaGTGTTTGTGCCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNLDRSL*CLCLFH
Trigger: GTGGAAGAGGCACAAACATCAAAGGCTCCTATCCAG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAGTGGCCAGTCCCAGTaGACAGGGACATGCAATACA +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRSGQSQ*TGTCNT
Trigger: TGTATTGCATGTCCCTGTTCACTGGGACTGGCCACT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGAGCTGGGGAGTCATTaGTTCCATCTCCCACCATTG +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRELGSH*FHLPPL
Trigger: CAATGGTGGGAGATGGAATCAATGACTCCCCAGCTC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCCAACTTGGCAGGAGTaGACTGAAACTGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVPTWQE*TETEHR
Trigger: TCTGTGCTCAGTTTCAGTTCACTCCTGCCAAGTTGG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp GTCTTCAGCAATGTGCTTTGGATATGGTCCCATGGCAAAGTCAGTGACGCCGTACTGCTTTTTGACAAATaGTGGAAAGCCCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: VFSNVLWIWSHGKVSDAVLLFDK*WKAHSF
Trigger: GAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAG...TACGGCGTCACTGACTTTGCCATGGGACCATATCCAAAGCACATTGCTGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTACCTTACTTCTGCCTTaGCAGCCATCAGGGCCACAA +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTATLLLP*QPSGPQ
Trigger: TTGTGGCCCTGATGGCTGGCAAGGCAGAAGTAAGGT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGCCACTGAGTTTGTCTaGAAACTGCTGGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVATEFV*KLLDRS
Trigger: GCTCCTATCCAGCAGTTTGCAGACAAACTCAGTGGC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTCCCACATTAGCCATTaGCAGAGCTGGGGAGTCATT +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVSHISH*QSWGVI
Trigger: AATGACTCCCCAGCTCTGGCAATGGCTAATGTGGGA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGATCCCATCCAGGGCTaGAAAACCAAACCAATGGGC +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRDPIQG*KTKPMG
Trigger: GCCCATTGGTTTGGTTTTGCAGCCCTGGATGGGATC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGCTAAACTCACAGCAATaGCCAGGGAAGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVLNSQQ*PGKMLK
Trigger: CTTCAGCATCTTCCCTGGGCATTGCTGTGAGTTTAG...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR CCA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGTCTTGTGTCAGAGGCTaGCTAACTACATTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKSCVRG*LTTFKG
Trigger: TCCTTTGAATGTAGTTAGCCAGCCTCTGACACAAGA...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp ATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTGCCTTGCCAGCCATCCATAACAGACAATCCTaGAAGAATCTGGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IGGCITAGLYLTSALPAIHNRQS*KNLALQ
Trigger: CTGGAGCGCCAGATTCTTCCAGGATTGTCTGTTATG...GATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTCACAGCAGTTGGAGTaGCCAGTCCCAGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDSQQLE*PVPVNR
Trigger: CCTGTTCACTGGGACTGGCCACTCCAACTGCTGTGA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTACAACAGTGGAAAGATaGGAGGCAGGGAACCCTACA +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVTTVER*EAGNPT
Trigger: TGTAGGGTTCCCTGCCTCCCATCTTTCCACTGTTGT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTCCATGGCAAAGTCAGTaGCGCCGTAACAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAPWQSQ*RRNSQK
Trigger: TTTCTGACTGTTACGGCGTCACTGACTTTGCCATGG...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTATCTTCACAAGCTCCTaGCTTTTTCTCCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVIFTSS*LFLQCP
Trigger: GGGACACTGGAGAAAAAGTCAGGAGCTTGTGAAGAT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ACACGTCATTCCCCTCACAACAAGTTCCAAAACACCATCTCCTTCATCAGCATTATCTTCACAAGCTCCTaGCTTTTTCTCCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TRHSPHNKFQNTISFISIIFTSS*LFLQCP
Trigger: GGGACACTGGAGAAAAAGTCAGGAGCTTGTGAAGAT...AATGCTGATGAAGGAGATGGTGTTTTGGAACTTGTTGTGAGGGGAATGACGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGCTGGAGGGAGAGTTTaGGGTACTCTCAACTTCACT +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRAGGRV*GTLNFT
Trigger: AGTGAAGTTGAGAGTACCTCAAACTCTCCCTCCAGC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTAAGCGGCATTTCCGATaGAGGCTGAGCTATTACTAC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVKRHFR*RLSYYY
Trigger: GTAGTAATAGCTCAGCCTTCATCGGAAATGCCGCTT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCCTTCCTCCTTGTCTTaGACTGGTGTCATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNPSSLS*TGVIPL
Trigger: TAAAGGGATGACACCAGTTCAAGACAAGGAGGAAGG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAATCCAAGTTCTCGGATaGACTCTGCTATCATTGGGG +
Preference number: 4 (lower is better)
Translates to: PNPSSRMNSAIIGGCITAIQVLG*TLLSLG
Trigger: CCCCAATGATAGCAGAGTTCATCCGAGAACTTGGAT...TGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp GTTGCAAAGTGGTGGTCCATAACCATCATATATATCATCAGCCCCATTACAGGATGCGCAGATAAGCAGTaGCCCGTTCTGGTTAATGGA +
Preference number: 4 (lower is better)
Translates to: VAKWWSITIIYIISPITGCADKQ*PVLVNG
Trigger: TCCATTAACCAGAACGGGTCACTGCTTATCTGCGCA...TCCTGTAATGGGGCTGATGATATATATGATGGTTATGGACCACCACTTTGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTACCACTGGGGTTCCGTaGGTAATGGTTCCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTATTGVP*VMVPVL
Trigger: TAAGACTGGAACCATTACTCACGGAACCCCAGTGGT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGTTAGAACCTTTACTTaGTTCACCACTGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNVRTFT*FTTGVP
Trigger: CGGAACCCCAGTGGTGAATCAAGTAAAGGTTCTAAC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CACCTTTTATTAGTATGCCATTTTGAGCACCTACTCCTGTACCCACCATCACAGACTCCCGGTTACCAATaGGGACTTTATACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: HLLLVCHFEHLLLYPPSQTPGYQ*GLYTAE
Trigger: CTCAGCAGTATAAAGTCCTCATTGGTAACCGGGAGT...CTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATACTAATAAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCGTTTCCCCTCCTCTTaGAGTTGCTTCACTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNRFPSS*SCFTLA
Trigger: TGCTAAAGTGAAGCAACTTCAAGAGGAGGGGAAACG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTGCCTTGCCAGCCATCAGTCCCATTGCTATTTaGAAGGGAGACTCGTATGGA +
Preference number: 4 (lower is better)
Translates to: IGGCITAGLYLTSALPAISPIAI*KGDSYG
Trigger: TCCATACGAGTCTCCCTTGCAAATAGCAATGGGACT...GATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGATTCCGTTCAATGTTTaGTACACAGGAAGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGIPFNV*YTGSAS
Trigger: ACTTGCGCTTCCTGTGTAGCAAACATTGAACGGAAT...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp GGGGGTGTGTCAAAGAAAGTAATAGGGTTCACTTTGGCTCTCTCATACATTGCAATTATACCTTACTTCTaGCTTGCCAGCCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGVSKKVIGFTLALSYIAIIPYF*LASHQG
Trigger: GCCCTGATGGCTGGCAAGGCAGAAGTAAGGTATAAT...TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTACTTTCTTTGACACACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp GGGGGTGTGTCAAAGAAAGTAATAGGGTTCACTTTGGCTCTCTCATACATTGCAAGAAAGGGTTGTGTCTaGTCCAACATGTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GGVSKKVIGFTLALSYIARKGCV*SNMCCA
Trigger: TGCGCAACACATGTTGGAGCAGACACAACCCTTTCT...TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTACTTTCTTTGACACACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTGTCCAGCTCCTGTTTaGAATATTTGGTTATGGCTG +
Preference number: 4 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGCPAPV*NIWLWL
Trigger: CAGCCATAACCAAATATTGCAAACAGGAGCTGGACA...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTATGGATAGCCAGTTCTaGTTCAGGCTTCACTGTGTC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVMDSQF*FRLHCV
Trigger: GACACAGTGAAGCCTGAAGCAGAACTGGCTATCCAT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CACAACCTGGAAATCTATGCAGGTACCCAAGGTTTCAGTGTCCAGCTCCTGTTTGAGCCTCTGATGTTTTaGCCTTTGCTATATGTTCCA +
Preference number: 4 (lower is better)
Translates to: HNLEIYAGTQGFSVQLLFEPLMF*PLLYVP
Trigger: TGGAACATATAGCAAAGGGCAAAACATCAGAGGCTC...AAACAGGAGCTGGACACTGAAACCTTGGGTACCTGCATAGATTTCCAGGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGCAATCTGCTGCTCAATaGTCCAAACACAGGAATTGC +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVQSAAQ*SKHRNC
Trigger: GCAATTCCTGTGTTTGGACCATTGAGCAGCAGATTG...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGTGCTAGTACATGAATaGCAGGTCATCCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNVLVHE*QVIPST
Trigger: AGTGGAAGGGATGACCTGCCATTCATGTACTAGCAC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTCTGAAGAGATGAGCTaGAGGGAGAGTTTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVSEEMS*RESLRY
Trigger: GTACCTCAAACTCTCCCTCCAGCTCATCTCTTCAGA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTCTGAAGAGATGAGCTaGAGGGAGAGTTTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNSEEMS*RESLRY
Trigger: GTACCTCAAACTCTCCCTCCAGCTCATCTCTTCAGA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATAACACGACCATCCACTaGAAATTTGCCTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNNTTIH*KFASWN
Trigger: GTTCCAGGAGGCAAATTTCCAGTGGATGGTCGTGTT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGGCTAATACCACAGCCTaGCACAACCTGGAAATCTAT +
Preference number: 4 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGANTTA*HNLEIY
Trigger: ATAGATTTCCAGGTTGTGCCAGGCTGTGGTATTAGC...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCATGACAAGTTAAACTaGCAGCACTCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNHDKLN*QHSPWP
Trigger: AGGCCATGGAGAGTGCTGCCAGTTTAACTTGTCATG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCTATGTGCCAGATGTTaGGTTAGCAGCAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVLCARC*VSSSFA
Trigger: AGCAAAGCTGCTGCTAACCCAACATCTGGCACATAG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGAGGCAAATGCAATGGTaGTTGCCAGCACAATCAGTA +
Preference number: 4 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGRQMQW*LPAQSV
Trigger: TACTGATTGTGCTGGCAACCACCATTGCATTTGCCT...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp ACACGTCATTCCCCTCACAACAAGTTCCAAAACACCATCTCCTTCATCAGCATTTCCCAGTATCTAAACTaGGTTCTGGAACCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TRHSPHNKFQNTISFISISQYLN*VLEPAL
Trigger: AAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGA...AATGCTGATGAAGGAGATGGTGTTTTGGAACTTGTTGTGAGGGGAATGACGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGAGACTTTAATTCGCTaGACACCTTGCAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNETLIR*TPCSFP
Trigger: TGGGAAACTGCAAGGTGTTCAGCGAATTAAAGTCTC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGAGACTTTAATTCGCTaGACACCTTGCAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVETLIR*TPCSFP
Trigger: TGGGAAACTGCAAGGTGTTCAGCGAATTAAAGTCTC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGACAATAGTAGCTTCTTaGTTGTCCAGGGAGACTTTA +
Preference number: 4 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGTIVAS*LSRETL
Trigger: TAAAGTCTCCCTGGACAATCAAGAAGCTACTATTGT...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AGTCATGCCATCAATGTTTATCACAGTTTCTTGTGTCAGAGGCTGGCTAACTACAAGCGGCATTTCCGATaGAGGCTGAGCTATTACTAC +
Preference number: 4 (lower is better)
Translates to: SHAINVYHSFLCQRLANYKRHFR*RLSYYY
Trigger: GTAGTAATAGCTCAGCCTTCATCGGAAATGCCGCTT...GTAGTTAGCCAGCCTCTGACACAAGAAACTGTGATAAACATTGATGGCATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCTGACCGATCCTTCTTaGCCAAAGAAGCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNLTDPS*PKKLQN
Trigger: GTTTTGAAGCTTCTTTGGTCAAGAAGGATCGGTCAG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCACTGACCGATCCTTCTTaGCCAAAGAAGCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: PNPSSRMNSAIIGGCITALTDPS*PKKLQN
Trigger: GTTTTGAAGCTTCTTTGGTCAAGAAGGATCGGTCAG...TGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTGCGCAGATAAGCAGTaGCCCGTTCTGGTTAATGGA +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDCADKQ*PVLVNG
Trigger: TCCATTAACCAGAACGGGTCACTGCTTATCTGCGCA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATGACAAGACCATTTCTAATCATCCACTCCCGGTTACCAATGAGGACTTTATACCTGGATAGGAGCCTTTaGTGTTTGTGCCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: MTRPFLIIHSRLPMRTLYLDRSL*CLCLFH
Trigger: GTGGAAGAGGCACAAACATCAAAGGCTCCTATCCAG...GTATAAAGTCCTCATTGGTAACCGGGAGTGGATGATTAGAAATGGTCTTGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AGCAAATCGTATTATCGTTTCTGTTCGGGAGATACTTCTATTGTAGCCAGGAAAAGTGGCCAGTCCCAGTaGACAGGGACATGCAATACA +
Preference number: 4 (lower is better)
Translates to: SKSYYRFCSGDTSIVARKSGQSQ*TGTCNT
Trigger: TGTATTGCATGTCCCTGTTCACTGGGACTGGCCACT...TTTCCTGGCTACAATAGAAGTATCTCCCGAACAGAAACGATAATACGATTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTATTAGTATGCCATTTTaGGCACCTACTCCTGTACCC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVISMPF*APTPVP
Trigger: GGGTACAGGAGTAGGTGCTCAAAATGGCATACTAAT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AGGATCCCTCTGTGTTTTGTGAGACTAGACTCTATTTTATGTACGCAGGAGGCAATTAGTATGCCATTTTaGGCACCTACTCCTGTACCC +
Preference number: 4 (lower is better)
Translates to: RIPLCFVRLDSILCTQEAISMPF*APTPVP
Trigger: GGGTACAGGAGTAGGTGCTCAAAATGGCATACTAAT...TGCCTCCTGCGTACATAAAATAGAGTCTAGTCTCACAAAACACAGAGGGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTACTACCTTTACCTTATaGGCCATCTCCAATGGCTCT +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVTTFTL*AISNGS
Trigger: AGAGCCATTGGAGATGGCTCATAAGGTAAAGGTAGT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGTTAGAACCTTTACTTaGTTCACCACTGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRVRTFT*FTTGVP
Trigger: CGGAACCCCAGTGGTGAATCAAGTAAAGGTTCTAAC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp GACTTTTTCTCCAGTGTCCCAGTATCTAAACTGAGTTCTGGAACCAGCTCTTTTGTTAGAACCTTTACTTaGTTCACCACTGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: DFFSSVPVSKLSSGTSSFVRTFT*FTTGVP
Trigger: CGGAACCCCAGTGGTGAATCAAGTAAAGGTTCTAAC...AAAAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGACACTGGAGAAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTTGCTGTGTCAGTGCATaGCAAGTTAAACTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTACCVSA*QVKLAA
Trigger: TGCTGCCAGTTTAACTTGTCATGCACTGACACAGCA...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGTGAAGGTAACATCATaGATGCTGTGTCAGTGCATG +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNVKVTS*MLCQCM
Trigger: CATGCACTGACACAGCATTCATGATGTTACCTTCAC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGTTGTTTGGTCTCTTCTaGTGCTCAGTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVLFGLF*CSVSSS
Trigger: AGATGAGGAAACTGAGCATCAGAAGAGACCAAACAA...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR TCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGCTCATTACATTCATTTaGCGGCAAGCTCTTCCACTT +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVLITFI*RQALPL
Trigger: AAGTGGAAGAGCTTGCCGTCAAATGAATGTAATGAG...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR GCA 90 bp ACTGGAAATTTGCCTCCTGGAACTACTTTAATGATATCTCCACGTTGTACAAGTATGTGCTTTGTTGGTTaGCAGGGCCACGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: TGNLPPGTTLMISPRCTSMCFVG*QGHGAV
Trigger: TACTGCTCCGTGGCCCTGGCAACCAACAAAGCACAT...ACTTGTACAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGGTCATATTTAATATGTaGTTTGTTGGTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGVIFNM*FVGCQG
Trigger: GCCCTGGCAACCAACAAAGCACATATTAAATATGAC...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAGAAAGGGTTGTGTCTaGTCCAACATGTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTARKGCV*SNMCCA
Trigger: TGCGCAACACATGTTGGAGCAGACACAACCCTTTCT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACGCCACTGAGTTTGTCTaGAAACTGCTGGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDATEFV*KLLDRS
Trigger: GCTCCTATCCAGCAGTTTGCAGACAAACTCAGTGGC...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCAACCTGGAAATCTATaGAGGTACCCAAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNQPGNL*RYPRFQ
Trigger: CTGAAACCTTGGGTACCTGCATAGATTTCCAGGTTG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAGGCTTCACTGTGTCTaGAATGGCTATCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTARLHCV*NGYQAT
Trigger: TGTGGCTTGATAGCCATTGCAGACACAGTGAAGCCT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTAGGCTTCACTGTGTCTaGAATGGCTATCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: RMNSAIIGGCITAGLYLTRLHCV*NGYQAT
Trigger: TGTGGCTTGATAGCCATTGCAGACACAGTGAAGCCT...AGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTATGGATAGCCAGTTCTaGTTCAGGCTTCACTGTGTC +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAMDSQF*FRLHCV
Trigger: GACACAGTGAAGCCTGAAGCAGAACTGGCTATCCAT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCTGGCTGTGTTCAACTaGTTGAGGTGGGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLLAVFN*LRWVGG
Trigger: CCCTCCCACCCACCTCAAGCAGTTGAACACAGCCAG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCAATCTGCTGCTCAATaGTCCAAACACAGGAATTGC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVQSAAQ*SKHRNC
Trigger: GCAATTCCTGTGTTTGGACCATTGAGCAGCAGATTG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTAGAGGGTCAGGATTATaGATAACAGCATCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVRGSGL*ITASKP
Trigger: GGGCTTTGATGCTGTTATCCATAATCCTGACCCTCT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTGTCTGTCACACCCTTaGTCTTCAGCAATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVCLSHP*SSAMCF
Trigger: AAAGCACATTGCTGAAGACCAAGGGTGTGACAGACA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTGTGCTAGTACATGAATaGCAGGTCATCCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAVLVHE*QVIPST
Trigger: AGTGGAAGGGATGACCTGCCATTCATGTACTAGCAC...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp CGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTGTGCTAGTACATGAATaGCAGGTCATCCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RMNSAIIGGCITAGLYLTVLVHE*QVIPST
Trigger: AGTGGAAGGGATGACCTGCCATTCATGTACTAGCAC...AGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGAACTCTGCTATCATTaGGGGTTGTATAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVELCYH*GLYNSR
Trigger: CCTGCTGTTATACAACCCCCAATGATAGCAGAGTTC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGAACTCTGCTATCATTaGGGGTTGTATAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNELCYH*GLYNSR
Trigger: CCTGCTGTTATACAACCCCCAATGATAGCAGAGTTC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp GGGGGTGTGTCAAAGAAAGTAATAGGGTTCACTTTGGCTCTCTCATACATTGCAGAACTCTGCTATCATTaGGGGTTGTATAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGVSKKVIGFTLALSYIAELCYH*GLYNSR
Trigger: CCTGCTGTTATACAACCCCCAATGATAGCAGAGTTC...TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTACTTTCTTTGACACACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATAATCCTGGAAGAATCTaGCGCTCCAGGAACATAGAA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNNPGRI*RSRNIE
Trigger: TTCTATGTTCCTGGAGCGCCAGATTCTTCCAGGATT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAACACGACCATCCACTaGAAATTTGCCTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTANTTIH*KFASWN
Trigger: GTTCCAGGAGGCAAATTTCCAGTGGATGGTCGTGTT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAGCAGTGACCCGTTCTaGTTAATGGAACCAGCAATC +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRSSDPF*LMEPAI
Trigger: GATTGCTGGTTCCATTAACCAGAACGGGTCACTGCT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTACTTGATTCACCACTaGGGTTCCGTGAGTAATGGT +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVYLIHH*GSVSNG
Trigger: ACCATTACTCACGGAACCCCAGTGGTGAATCAAGTA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGCTAATACCACAGCCTaGCACAACCTGGAAATCTAT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNANTTA*HNLEIY
Trigger: ATAGATTTCCAGGTTGTGCCAGGCTGTGGTATTAGC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAGTCATTGCTCCCCAGTaGGGCAGGGATACAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRVIAPQ*GRDTGL
Trigger: CAAGCCTGTATCCCTGCCCCACTGGGGAGCAATGAC...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGCTATGTGCCAGATGTTaGGTTAGCAGCAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRLCARC*VSSSFA
Trigger: AGCAAAGCTGCTGCTAACCCAACATCTGGCACATAG...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR CAA 72 bp TCAATAGCTCCCAATTTGAGGTACTTGGGCTGCTTTTaGACAAATGCTGGAAAGCCCATAGCTTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: SIAPNLRYLGCF*TNAGKPIASIC
Trigger: GCAGATTGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 72 bp GGACCAATAATTTCTGGGTCATATTTAATATGTGCTTaGTTGGTTGCCAGGGCCACGGAGCAGTATAGGATC +
Preference number: 4 (lower is better)
Translates to: GPIISGSYLICA*LVARATEQYRI
Trigger: GATCCTATACTGCTCCGTGGCCCTGGCAACCAACAAAGCACATATTAAATATGACCCAGAAATTATTGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AGTCATGCCATCAATGTTTATCACAGTTTCTTGTGTCAGAGGCTGGCTAACTACGGATTCTGGAGTGACTaGGCTTGCATTATACTTCAC +
Preference number: 4 (lower is better)
Translates to: SHAINVYHSFLCQRLANYGFWSD*ACIILH
Trigger: GTGAAGTATAATGCAAGCTCAGTCACTCCAGAATCC...GTAGTTAGCCAGCCTCTGACACAAGAAACTGTGATAAACATTGATGGCATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGACTACCTTTACCTTATaGGCCATCTCCAATGGCTCT +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRTTFTL*AISNGS
Trigger: AGAGCCATTGGAGATGGCTCATAAGGTAAAGGTAGT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACACTCCCGGTTACCAATaGGGACTTTATACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDTPGYQ*GLYTAE
Trigger: CTCAGCAGTATAAAGTCCTCATTGGTAACCGGGAGT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAGTCTCCCACCAGGAGTaGGTGCTTGTCAGGTTCACT +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRVSHQE*VLVRFT
Trigger: AGTGAACCTGACAAGCACTCACTCCTGGTGGGAGAC...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAGCTACTCAGGAGGCTaGGGCAGGGAGAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIASYSGG*GRENSL
Trigger: CAAGGAATTCTCCCTGCCTCAGCCTCCTGAGTAGCT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGTTCACTTTTCCAATCTaGTGCTCAATGGTCCAAACA +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVFTFPI*CSMVQT
Trigger: TGTTTGGACCATTGAGCAGCAGATTGGAAAAGTGAA...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTACACCCTCAATAGACTaGACACAGGAATTACAAGTC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVTPSID*TQELQV
Trigger: GACTTGTAATTCCTGTGTGCAGTCTATTGAGGGTGT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTACTCAACAGTCCCATTaGTATTTGCAAGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTATQQSH*YLQGRL
Trigger: GAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AATTTGAGGTACTTGGGCTGCTTTTTGACAAATGCTGGAAAGCCCATAGCTTCAACTCAACAGTCCCATTaGTATTTGCAAGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: NLRYLGCFLTNAGKPIASTQQSH*YLQGRL
Trigger: GAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGT...TGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp CCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAAGTTTGTCTGCAAACTaGTGGATAGGAGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: PNPSSRMNSAIIGGCITASLSAN*WIGAFD
Trigger: ATCAAAGGCTCCTATCCAGCAGTTTGCAGACAAACT...TGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATCCATCTCCCACCATTaGTACCCGTTTCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRSISHH*YPFPLL
Trigger: GAGGAGGGGAAACGGGTAGCAATGGTGGGAGATGGA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTTCAATACTACAAGCTaGTATTCCCACTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNFNTTS*YSHCPT
Trigger: TGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGTGTCTTATGCTTCAGTaGTTTATAAGCCTGAATGTA +
Preference number: 4 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKCLMLQ*FISLNV
Trigger: TACATTCAGGCTTATAAAGCACTGAAGCATAAGACA...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCAGTACGTCCATATTTaGTGTCTTATGCTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVQYVHI*CLMLQC
Trigger: GCACTGAAGCATAAGACAGCAAATATGGACGTACTG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR GCA 90 bp GACTTTTTCTCCAGTGTCCCAGTATCTAAACTGAGTTCTGGAACCAGCTCTTTTAAATGCAATGGTGGTTaGCAGCACAATCAGTACGTC +
Preference number: 4 (lower is better)
Translates to: DFFSSVPVSKLSSGTSSFKCNGG*QHNQYV
Trigger: GACGTACTGATTGTGCTGGCAACCACCATTGCATTT...AAAAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGACACTGGAGAAAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp ATGACAAGACCATTTCTAATCATCCACTCCCGGTTACCAATGAGGACTTTATACGTGATACCCTGGGAATaGATGGCTGGCTCAACATTT +
Preference number: 4 (lower is better)
Translates to: MTRPFLIIHSRLPMRTLYVIPWE*MAGSTF
Trigger: AAATGTTGAGCCAGCCATGCATTCCCAGGGTATCAC...GTATAAAGTCCTCATTGGTAACCGGGAGTGGATGATTAGAAATGGTCTTGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGGTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGACAATCTGCTGCTCAATaGTCCAAACACAGGAATTGC +
Preference number: 4 (lower is better)
Translates to: KVSVSSSCLQYLVMAVPRQSAAQ*SKHRNC
Trigger: GCAATTCCTGTGTTTGGACCATTGAGCAGCAGATTG...TCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAGAGGGTCAGGATTATaGATAACAGCATCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTARGSGL*ITASKP
Trigger: GGGCTTTGATGCTGTTATCCATAATCCTGACCCTCT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTTCAGCAATGTGCTTTaGATATGGTCCCATGGCAAA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNFSNVL*IWSHGK
Trigger: TTTGCCATGGGACCATATCCAAAGCACATTGCTGAA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp GAGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTTTCAGCAATGTGCTTTaGATATGGTCCCATGGCAAA +
Preference number: 4 (lower is better)
Translates to: EDHTQQSHCYLQGRLVWIFSNVL*IWSHGK
Trigger: TTTGCCATGGGACCATATCCAAAGCACATTGCTGAA...AATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp GACTTTTTCTCCAGTGTCCCAGTATCTAAACTGAGTTCTGGAACCAGCTCTTTTTGTCTGTCACACCCTTaGTCTTCAGCAATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: DFFSSVPVSKLSSGTSSFCLSHP*SSAMCF
Trigger: AAAGCACATTGCTGAAGACCAAGGGTGTGACAGACA...AAAAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGACACTGGAGAAAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTCTTGTGTCAGAGGCTaGCTAACTACATTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVSCVRG*LTTFKG
Trigger: TCCTTTGAATGTAGTTAGCCAGCCTCTGACACAAGA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTCTTGTGTCAGAGGCTaGCTAACTACATTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNSCVRG*LTTFKG
Trigger: TCCTTTGAATGTAGTTAGCCAGCCTCTGACACAAGA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCAAGGGAGACTCGTATaGATTTTACACCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNQGRLV*ILHLAF
Trigger: AAAAGCCAGGTGTAAAATCCATACGAGTCTCCCTTG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGCATTTTCTATCACAGTaGCTCCAAATCCAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGHFLSQ*LQIQVL
Trigger: GAGAACTTGGATTTGGAGCCACTGTGATAGAAAATG...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCATAACAGACAATCCTaGAAGAATCTGGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDHNRQS*KNLALQ
Trigger: CTGGAGCGCCAGATTCTTCCAGGATTGTCTGTTATG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGACAAGACCATTTCTAATCATCCACTCCCGGTTACCAATGAGGACTTTATACAGCAGTGACCCGTTCTaGTTAATGGAACCAGCAATC +
Preference number: 4 (lower is better)
Translates to: MTRPFLIIHSRLPMRTLYSSDPF*LMEPAI
Trigger: GATTGCTGGTTCCATTAACCAGAACGGGTCACTGCT...GTATAAAGTCCTCATTGGTAACCGGGAGTGGATGATTAGAAATGGTCTTGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTTGTCTGCAAACTGCTaGATAGGAGCCTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNLSANC*IGAFDV
Trigger: AACATCAAAGGCTCCTATCCAGCAGTTTGCAGACAA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTTGTCTGCAAACTGCTaGATAGGAGCCTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVLSANC*IGAFDV
Trigger: AACATCAAAGGCTCCTATCCAGCAGTTTGCAGACAA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTGCCTTGCCAGCCATCTCCATACCAAGAGGGTaGCAATGGAAACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: IGGCITAGLYLTSALPAISIPRG*QWKQKQ
Trigger: TTGTTTTTGTTTCCATTGCCACCCTCTTGGTATGGA...GATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGACTGTGATAGAGGCTTaGAAAGCAAATCGTATTATC +
Preference number: 4 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGTVIEA*KANRII
Trigger: GATAATACGATTTGCTTTCCAAGCCTCTATCACAGT...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp ATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTGCCTTGCCAGCCATCTGCAATATTTGGTTATaGCTGTTCCTAGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: IGGCITAGLYLTSALPAICNIWL*LFLEGV
Trigger: AACACCCTCTAGGAACAGCCATAACCAAATATTGCA...GATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCACTCTTCTGTCCTATCTaGCTCCGGGCAGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIALFCPI*LRAGSS
Trigger: TGAACTGCCTGCCCGGAGCCAGATAGGACAGAAGAG...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTTCAGACTAAGGGCATaGTTGCTGAGTGAATACAGA +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVFRLRA*LLSEYR
Trigger: TCTGTATTCACTCAGCAACCATGCCCTTAGTCTGAA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGTTACTCATACCAGATaGAGGGACTGCAGAAAGTTA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNVTHTR*RDCRKL
Trigger: TAACTTTCTGCAGTCCCTCCATCTGGTATGAGTAAC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGCTTTGTGCTCTATCTaGTTACTCATACCAGATGGA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNALCSI*LLIPDG
Trigger: TCCATCTGGTATGAGTAACCAGATAGAGCACAAAGC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAGGCAAATGCAATGGTaGTTGCCAGCACAATCAGTA +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTARQMQW*LPAQSV
Trigger: TACTGATTGTGCTGGCAACCACCATTGCATTTGCCT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR CCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGCTCAGTTTCCTCATCTaGTTTCTCTATCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVLSFLI*FLYPMV
Trigger: AACCATAGGATAGAGAAACCAGATGAGGAAACTGAG...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR CCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGCTTCAGCAAATTGTTTaGTCTCTTCTGATGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVLQQIV*SLLMLS
Trigger: ACTGAGCATCAGAAGAGACCAAACAATTTGCTGAAG...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
3UTR CAA 72 bp AGACGTTCTACATCAATAGCTCCCAATTTGAGGTACTaGGGCTGCTTTTTGACAAATGCTGGAAAGCCCATA +
Preference number: 4 (lower is better)
Translates to: RRSTSIAPNLRY*GCFLTNAGKPI
Trigger: TATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGATGTAGAACGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 72 bp TGCATGCCATCAATGATGAAAGTGGCTGTTGAATCATaGGTATATGATGGACTCCTTTGCTGTGACCCTTCT +
Preference number: 4 (lower is better)
Translates to: CMPSMMKVAVES*VYDGLLCCDPS
Trigger: AGAAGGGTCACAGCAAAGGAGTCCATCATATACCAATGATTCAACAGCCACTTTCATCATTGATGGCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 72 bp TTAGTAGAGGATCATACTCAACAGTCCCATTGCTATTaGCAAGGGAGACTCGTATGGATTTTACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LVEDHTQQSHCY*QGRLVWILHLA
Trigger: AGCCAGGTGTAAAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTCTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 72 bp GGAGAGGTTAGTAGAGGATCATACTCAACAGTCCCATaGCTATTTGCAAGGGAGACTCGTATGGATTTTACA +
Preference number: 4 (lower is better)
Translates to: GEVSRGSYSTVP*LFARETRMDFT
Trigger: TGTAAAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTCTACTAACCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 72 bp TCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTaGTATAACAGCAGGATTATACCTTACTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SKFSDELCYHWG*YNSRIIPYFCL
Trigger: AAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 72 bp CAATGGTGGTTGCCAGCACAATCAGTACGTCCATATTaGCTGTCTTATGCTTCAGTGCTTTATAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QWWLPAQSVRPY*LSYASVLYKPE
Trigger: TTCAGGCTTATAAAGCACTGAAGCATAAGACAGCAAATATGGACGTACTGATTGTGCTGGCAACCACCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 72 bp ACAGGGACATGCAATACACAGAACTGTGATAGAGGCTaGGAAAGCAAATCGTATTATCGTTTCTGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: TGTCNTQNCDRG*ESKSYYRFCSG
Trigger: TCCCGAACAGAAACGATAATACGATTTGCTTTCCAAGCCTCTATCACAGTTCTGTGTATTGCATGTCCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TGGTTCCAGTCTTATCAAATACCACTACCTTTACCTTATGAGCCATCTCCAATGAATAGTGCTAGTACATaGATGGCAGGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: WFQSYQIPLPLPYEPSPMNSAST*MAGHPF
Trigger: GAAGGGATGACCTGCCATTCATGTACTAGCACTATT...CATTGGAGATGGCTCATAAGGTAAAGGTAGTGGTATTTGATAAGACTGGAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACGGATTCTGGAGTGACTaGGCTTGCATTATACTTCAC +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDGFWSD*ACIILH
Trigger: GTGAAGTATAATGCAAGCTCAGTCACTCCAGAATCC...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGCCTCTTCCACAAGTTTaGCAATTTGAGAAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRPLPQV*QFEKGL
Trigger: CAACCCTTTCTCAAATTGTCAAACTTGTGGAAGAGG...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGAACAAAATAGCCACTaGGTTTGTCTGCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWREQNSH*VCLQTA
Trigger: AGCAGTTTGCAGACAAACTCAGTGGCTATTTTGTTC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTTGAACAAAATAGCCACTaGGTTTGTCTGCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: RIILNSPIAICKGDSYGFEQNSH*VCLQTA
Trigger: AGCAGTTTGCAGACAAACTCAGTGGCTATTTTGTTC...AAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAGTGGCCAGTCCCAGTaGACAGGGACATGCAATACA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRSGQSQ*TGTCNT
Trigger: TGTATTGCATGTCCCTGTTCACTGGGACTGGCCACT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTTAGTAATGCCAACCTaGGAAGCAATAGATCTAGCT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNLVMPT*EAIDLA
Trigger: AGCTAGATCTATTGCTTCTCAGGTTGGCATTACTAA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp GAGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTTTAGTAATGCCAACCTaGGAAGCAATAGATCTAGCT +
Preference number: 4 (lower is better)
Translates to: EDHTQQSHCYLQGRLVWILVMPT*EAIDLA
Trigger: AGCTAGATCTATTGCTTCTCAGGTTGGCATTACTAA...AATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGACTTTAGCAACCTTGTaGGAAGGTAGAACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRTLATL*EGRTSA
Trigger: TGCTGAAGTTCTACCTTCTCACAAGGTTGCTAAAGT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAGAGCTGGGGAGTCATTaGTTCCATCTCCCACCATTG +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAELGSH*FHLPPL
Trigger: CAATGGTGGGAGATGGAATCAATGACTCCCCAGCTC...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGCAGGGATACAGGCTTaGGAGTATCTTCAATATTTT +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVAGIQA*EYLQYF
Trigger: AAAATATTGAAGATACTCTCAAGCCTGTATCCCTGC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGCAGGGATACAGGCTTaGGAGTATCTTCAATATTTT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNAGIQA*EYLQYF
Trigger: AAAATATTGAAGATACTCTCAAGCCTGTATCCCTGC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGGGCTGGCTCAACATTTaGAAATCAATCAGTGTAATT +
Preference number: 4 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVGWLNI*KSISVI
Trigger: AATTACACTGATTGATTTTCAAATGTTGAGCCAGCC...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTTCACTTTTCCAATCTaGTGCTCAATGGTCCAAACA +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVFTFPI*CSMVQT
Trigger: TGTTTGGACCATTGAGCAGCAGATTGGAAAAGTGAA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp GACTTTTTCTCCAGTGTCCCAGTATCTAAACTGAGTTCTGGAACCAGCTCTTTTTTGAGGTACTTGGGCTaGTTTTTGACAAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: DFFSSVPVSKLSSGTSSFLRYLG*FLTNAG
Trigger: TCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAA...AAAAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGACACTGGAGAAAAAGTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp AATTTGAGGTACTTGGGCTGCTTTTTGACAAATGCTGGAAAGCCCATAGCTTCAACACCCTCAATAGACTaGACACAGGAATTACAAGTC +
Preference number: 4 (lower is better)
Translates to: NLRYLGCFLTNAGKPIASTPSID*TQELQV
Trigger: GACTTGTAATTCCTGTGTGCAGTCTATTGAGGGTGT...TGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACAGTCCCATTGCTATTTaGAAGGGAGACTCGTATGGA +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDSPIAI*KGDSYG
Trigger: TCCATACGAGTCTCCCTTGCAAATAGCAATGGGACT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTACCTTACTTCTGCCTTaGCAGCCATCAGGGCCACAA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAITLLLP*QPSGPQ
Trigger: TTGTGGCCCTGATGGCTGGCAAGGCAGAAGTAAGGT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTTTCTCGGATGAACTCTaGTATCATTGGGGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAFSDEL*YHWGLY
Trigger: ATACAACCCCCAATGATAGCAGAGTTCATCCGAGAA...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTTTTCTCGGATGAACTCTaGTATCATTGGGGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: RIILNSPIAICKGDSYGFFSDEL*YHWGLY
Trigger: ATACAACCCCCAATGATAGCAGAGTTCATCCGAGAA...AAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAATGTGCTTTGTTGGTTaGCAGGGCCACGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRMCFVG*QGHGAV
Trigger: TACTGCTCCGTGGCCCTGGCAACCAACAAAGCACAT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGTCATATTTAATATGTaGTTTGTTGGTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNVIFNM*FVGCQG
Trigger: GCCCTGGCAACCAACAAAGCACATATTAAATATGAC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ACTGGAAATTTGCCTCCTGGAACTACTTTAATGATATCTCCACGTTGTACAAGTATGGATAGCCAGTTCTaGTTCAGGCTTCACTGTGTC +
Preference number: 4 (lower is better)
Translates to: TGNLPPGTTLMISPRCTSMDSQF*FRLHCV
Trigger: GACACAGTGAAGCCTGAAGCAGAACTGGCTATCCAT...ACTTGTACAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCACCCACCAGGAGTGAGTaGTTGTCAGGTTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAPTRSE*LSGSLV
Trigger: TACCAGTGAACCTGACAAGCACTCACTCCTGGTGGG...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCCCACCAGGAGTGAGTaGTTGTCAGGTTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLPTRSE*LSGSLV
Trigger: TACCAGTGAACCTGACAAGCACTCACTCCTGGTGGG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTACAGTAGATGGATATTaGACAACATCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTATVDGY*TTSSTA
Trigger: AGCAGTGGACGATGTTGTGCAATATCCATCTACTGT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AATTCGCTGAACACCTTGCAGTTTCCCAATTTTTCCTTCAATAGTGCTAGTACACAAAGAGTAGGCAAATaGAATGGTGGTTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NSLNTLQFPNFSFNSASTQRVGK*NGGCQH
Trigger: GTGCTGGCAACCACCATTGCATTTGCCTACTCTTTG...TGTACTAGCACTATTGAAGGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp GACTTTTTCTCCAGTGTCCCAGTATCTAAACTGAGTTCTGGAACCAGCTCTTTTAATGTGCTTTGGATATaGTCCCATGGCAAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: DFFSSVPVSKLSSGTSSFNVLWI*SHGKVS
Trigger: ACTGACTTTGCCATGGGACCATATCCAAAGCACATT...AAAAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGACACTGGAGAAAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTTCAGCAATGTGCTTTaGATATGGTCCCATGGCAAA +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRFSNVL*IWSHGK
Trigger: TTTGCCATGGGACCATATCCAAAGCACATTGCTGAA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGATGCTGCTTACATATTaGAGTGCAGATAAAGTACTT +
Preference number: 4 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGMLLTY*SADKVL
Trigger: AAGTACTTTATCTGCACTCCAATATGTAAGCAGCAT...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCTCCTTGTCTTGAACTaGTGTCATCCCTTTAGTATA +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVLLVLN*CHPFSI
Trigger: TATACTAAAGGGATGACACCAGTTCAAGACAAGGAG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AGGATCCCTCTGTGTTTTGTGAGACTAGACTCTATTTTATGTACGCAGGAGGCACTCCTTGTCTTGAACTaGTGTCATCCCTTTAGTATA +
Preference number: 4 (lower is better)
Translates to: RIPLCFVRLDSILCTQEALLVLN*CHPFSI
Trigger: TATACTAAAGGGATGACACCAGTTCAAGACAAGGAG...TGCCTCCTGCGTACATAAAATAGAGTCTAGTCTCACAAAACACAGAGGGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCATTTTCTATCACAGTaGCTCCAAATCCAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNHFLSQ*LQIQVL
Trigger: GAGAACTTGGATTTGGAGCCACTGTGATAGAAAATG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTACTTGATTCACCACTaGGGTTCCGTGAGTAATGGT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDYLIHH*GSVSNG
Trigger: ACCATTACTCACGGAACCCCAGTGGTGAATCAAGTA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACAGCCTGGCACAACCTaGAAATCTATGCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRQPGTT*KSMQVP
Trigger: GGGTACCTGCATAGATTTCCAGGTTGTGCCAGGCTG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCAGCCTGGCACAACCTaGAAATCTATGCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLQPGTT*KSMQVP
Trigger: GGGTACCTGCATAGATTTCCAGGTTGTGCCAGGCTG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTGTTACTCATACCAGATaGAGGGACTGCAGAAAGTTA +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAVTHTR*RDCRKL
Trigger: TAACTTTCTGCAGTCCCTCCATCTGGTATGAGTAAC...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR CAA 72 bp GTGTTCTTTAGACGTTCTACATCAATAGCTCCCAATTaGAGGTACTTGGGCTGCTTTTTGACAAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: VFFRRSTSIAPN*RYLGCFLTNAG
Trigger: TCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGATGTAGAACGTCTAAAGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
3UTR CAA 72 bp TTTGCCTCCTGGAACTACTTTAATGATATCTCCACGTaGTACAAGTTCCACATCCACTTGTTCTTCACTGAG +
Preference number: 4 (lower is better)
Translates to: FASWNYFNDIST*YKFHIHLFFTE
Trigger: CTCAGTGAAGAACAAGTGGATGTGGAACTTGTACAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACCATGGCAAAGTCAGTaGCGCCGTAACAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRPWQSQ*RRNSQK
Trigger: TTTCTGACTGTTACGGCGTCACTGACTTTGCCATGG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGGCTGGAGGGAGAGTTTaGGGTACTCTCAACTTCACT +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLAGGRV*GTLNFT
Trigger: AGTGAAGTTGAGAGTACCTCAAACTCTCCCTCCAGC...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACTTTGCAAGAGCCTCTaGTGTTTTGCCCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRLCKSL*CFALYR
Trigger: CCTGTACAGGGCAAAACATCAGAGGCTCTTGCAAAG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343533.9
CDS-3UTR TCA 90 bp CGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTCCACTTGTTCTTCACTaGGGAGGATATTATCAGAAT +
Preference number: 4 (lower is better)
Translates to: RMNSAIIGGCITAGLYLTPLVLH*GGYYQN
Trigger: ATTCTGATAATATCCTCCTCAGTGAAGAACAAGTGG...AGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGTGCGCAGATAAGCAGTaGCCCGTTCTGGTTAATGGA +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLCADKQ*PVLVNG
Trigger: TCCATTAACCAGAACGGGTCACTGCTTATCTGCGCA...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AATTTGAGGTACTTGGGCTGCTTTTTGACAAATGCTGGAAAGCCCATAGCTTCAACAAGTTTGACAATTTaGGAAAGGGTTGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: NLRYLGCFLTNAGKPIASTSLTI*ERVVSA
Trigger: AGCAGACACAACCCTTTCTCAAATTGTCAAACTTGT...TGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCTGGATAGGAGCCTTTaGTGTTTGTGCCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLLDRSL*CLCLFH
Trigger: GTGGAAGAGGCACAAACATCAAAGGCTCCTATCCAG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACGAACAAAATAGCCACTaGGTTTGTCTGCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDEQNSH*VCLQTA
Trigger: AGCAGTTTGCAGACAAACTCAGTGGCTATTTTGTTC...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTACCACTGGGGTTCCGTaGGTAATGGTTCCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAITTGVP*VMVPVL
Trigger: TAAGACTGGAACCATTACTCACGGAACCCCAGTGGT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp GGGGGTGTGTCAAAGAAAGTAATAGGGTTCACTTTGGCTCTCTCATACATTGCATTACTGGCATCAATTTaGACCAGGGATGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: GGVSKKVIGFTLALSYIALLASI*TRDAFL
Trigger: TAAAAATGCATCCCTGGTTCAAATTGATGCCAGTAA...TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTACTTTCTTTGACACACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAGGACTTTATACTGCTaGGCATTAAGAGCATTTGAG +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTARTLYC*ALRAFE
Trigger: CTCAAATGCTCTTAATGCTCAGCAGTATAAAGTCCT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTTAGGACTTTATACTGCTaGGCATTAAGAGCATTTGAG +
Preference number: 4 (lower is better)
Translates to: RIILNSPIAICKGDSYGFRTLYC*ALRAFE
Trigger: CTCAAATGCTCTTAATGCTCAGCAGTATAAAGTCCT...AAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTTAGTAATGCCAACCTaGGAAGCAATAGATCTAGCT +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRLVMPT*EAIDLA
Trigger: AGCTAGATCTATTGCTTCTCAGGTTGGCATTACTAA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACATGAACGCTGATTTCTaGAGGACTCTTCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDMNADF*RTLLSY
Trigger: ATAGGACAGAAGAGTCCTTCAGAAATCAGCGTTCAT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTTCCAACATGAACGCTaGTTTCTGAAGGACTCTTCT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDFQHER*FLKDSS
Trigger: AGAAGAGTCCTTCAGAAATCAGCGTTCATGTTGGAA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTTTAGGAGAATTCCTTaGGGTATCATCTATTCCAAC +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVFRRIP*GIIYSN
Trigger: GTTGGAATAGATGATACCTCAAGGAATTCTCCTAAA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTCAGAGCTGATGCCTTaGAAAAGATATTTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNSELMP*KRYFCQ
Trigger: TTGGCAAAAATATCTTTTTCAAGGCATCAGCTCTGA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCCAACTTGGCAGGAGTaGACTGAAACTGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIPTWQE*TETEHR
Trigger: TCTGTGCTCAGTTTCAGTTCACTCCTGCCAAGTTGG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCACTGTCCCACAATATaGATACAAGACCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDHCPTI*IQDQED
Trigger: ATCCTCTTGGTCTTGTATTCATATTGTGGGACAGTG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATAAAACCCAAAAGGAGTaGTTCCAGGAATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNKTQKE*FQECLY
Trigger: ATAAAGACATTCCTGGAATCACTCCTTTTGGGTTTT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AATTCGCTGAACACCTTGCAGTTTCCCAATTTTTCCTTCAATAGTGCTAGTACACTTTGCAAGAGCCTCTaGTGTTTTGCCCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: NSLNTLQFPNFSFNSASTLCKSL*CFALCY
Trigger: ATAGCAAAGGGCAAAACATCAGAGGCTCTTGCAAAG...TGTACTAGCACTATTGAAGGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp AAGGTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGATTCACTTTTCCAATCTaGTGCTCAATGGTCCAAACA +
Preference number: 4 (lower is better)
Translates to: KVSVSSSCLQYLVMAVPRFTFPI*CSMVQT
Trigger: TGTTTGGACCATTGAGCAGCAGATTGGAAAAGTGAA...TCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp GTTGCAAAGTGGTGGTCCATAACCATCATATATATCATCAGCCCCATTACAGGAAGGGATTATTGTCACTaGTACAGTTCTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: VAKWWSITIIYIISPITGRDYCH*YSSFLR
Trigger: CCTCAGAAAAGAACTGTAGCAGTGACAATAATCCCT...TCCTGTAATGGGGCTGATGATATATATGATGGTTATGGACCACCACTTTGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCCCATAGCTTCAATCTaGTTTTTCATTTCCTCTACT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNPIASI*FFISST
Trigger: AGTAGAGGAAATGAAAAAGCAGATTGAAGCTATGGG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AATTCGCTGAACACCTTGCAGTTTCCCAATTTTTCCTTCAATAGTGCTAGTACATCCCATGTCTTCTATTaGTCCTCTCAACGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NSLNTLQFPNFSFNSASTSHVFY*SSQRFW
Trigger: CCAGAAACGTTGAGAGGAGCAATAGAAGACATGGGA...TGTACTAGCACTATTGAAGGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACATTCCGTTCAATGTTTaGTACACAGGAAGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDIPFNV*YTGSAS
Trigger: ACTTGCGCTTCCTGTGTAGCAAACATTGAACGGAAT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTATTATGGTGAAGAGTTaGAAAGTGGTGGTCCATAAC +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAIMVKS*KVVVHN
Trigger: GTTATGGACCACCACTTTGCAACTCTTCACCATAAT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACAGTTTGTCTGCAAACTaGTGGATAGGAGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDSLSAN*WIGAFD
Trigger: ATCAAAGGCTCCTATCCAGCAGTTTGCAGACAAACT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTGTCCAGCTCCTGTTTaGAATATTTGGTTATGGCTG +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDCPAPV*NIWLWL
Trigger: CAGCCATAACCAAATATTGCAAACAGGAGCTGGACA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AGCAAATCGTATTATCGTTTCTGTTCGGGAGATACTTCTATTGTAGCCAGGAAACAACCTGGAAATCTATaGAGGTACCCAAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SKSYYRFCSGDTSIVARKQPGNL*RYPRFQ
Trigger: CTGAAACCTTGGGTACCTGCATAGATTTCCAGGTTG...TTTCCTGGCTACAATAGAAGTATCTCCCGAACAGAAACGATAATACGATTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATAGAACTCATGCTTTGTaGTCTATCTGGTTACTCATA +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNRTHAL*SIWLLI
Trigger: TATGAGTAACCAGATAGAGCACAAAGCATGAGTTCT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTAAGAACAAGAACTCATaGTTTGTGCTCTATCTGGTT +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVKNKNS*FVLYLV
Trigger: AACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACGAGCCTCTGATGTTTTaGCCTTTGCTATATGTTCCA +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDEPLMF*PLLYVP
Trigger: TGGAACATATAGCAAAGGGCAAAACATCAGAGGCTC...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR CCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTCCTCATTACATTCCTaGTTTCTCTATCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVSSLHS*FLYPMV
Trigger: AACCATAGGATAGAGAAACCAGGAATGTAATGAGGA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATTGGGGGTTGTATAACAGCAGGATTATACCTTACTTCTGCCTTGCCAGCCATCCATTATACTTCACAATaGCAGACCTATTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: IGGCITAGLYLTSALPAIHYTSQ*QTYSLK
Trigger: CTTTAGAGAATAGGTCTGCCATTGTGAAGTATAATG...GATGGCTGGCAAGGCAGAAGTAAGGTATAATCCTGCTGTTATACAACCCCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCAAGGGAGACTCGTATaGATTTTACACCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDQGRLV*ILHLAF
Trigger: AAAAGCCAGGTGTAAAATCCATACGAGTCTCCCTTG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGACAAGACCATTTCTAATCATCCACTCCCGGTTACCAATGAGGACTTTATACCAAGGGAGACTCGTATaGATTTTACACCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: MTRPFLIIHSRLPMRTLYQGRLV*ILHLAF
Trigger: AAAAGCCAGGTGTAAAATCCATACGAGTCTCCCTTG...GTATAAAGTCCTCATTGGTAACCGGGAGTGGATGATTAGAAATGGTCTTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTTCCATACCAAGAGGGTaGCAATGGAAACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTASIPRG*QWKQKQ
Trigger: TTGTTTTTGTTTCCATTGCCACCCTCTTGGTATGGA...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AATTCGCTGAACACCTTGCAGTTTCCCAATTTTTCCTTCAATAGTGCTAGTACATACTTGATTCACCACTaGGGTTCCGTGAGTAATGGT +
Preference number: 4 (lower is better)
Translates to: NSLNTLQFPNFSFNSASTYLIHH*GSVSNG
Trigger: ACCATTACTCACGGAACCCCAGTGGTGAATCAAGTA...TGTACTAGCACTATTGAAGGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTGCAATATTTGGTTATaGCTGTTCCTAGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRCNIWL*LFLEGV
Trigger: AACACCCTCTAGGAACAGCCATAACCAAATATTGCA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp GGGGGTGTGTCAAAGAAAGTAATAGGGTTCACTTTGGCTCTCTCATACATTGCAAGAGCATTTGAGATCTaGGCATCAATAATCATGGAA +
Preference number: 4 (lower is better)
Translates to: GGVSKKVIGFTLALSYIARAFEI*ASIIME
Trigger: TTCCATGATTATTGATGCCCAGATCTCAAATGCTCT...TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTACTTTCTTTGACACACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAAACTCCAGCAGCTATaGGAATTCCAACCAGATTAT +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRKLQQL*EFQPDY
Trigger: ATAATCTGGTTGGAATTCCCATAGCTGCTGGAGTTT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGACAACAGTGGAAAGATaGGAGGCAGGGAACCCTACA +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLTTVER*EAGNPT
Trigger: TGTAGGGTTCCCTGCCTCCCATCTTTCCACTGTTGT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAGTCTGAACCGGCACTaGATATTAAAGTATCCTTGT +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTASLNRH*ILKYPC
Trigger: ACAAGGATACTTTAATATCCAGTGCCGGTTCAGACT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGACCAGCTCTTTTATCTaGTTGGCATTCACTATAGAA +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRTSSFI*LAFTIE
Trigger: TTCTATAGTGAATGCCAATCAGATAAAAGAGCTGGT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAATCTTCACAAGCTCCTaGCTTTTTCTCCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAIFTSS*LFLQCP
Trigger: GGGACACTGGAGAAAAAGTCAGGAGCTTGTGAAGAT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACACAATAGTAGCTTCTTaGTTGTCCAGGGAGACTTTA +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDTIVAS*LSRETL
Trigger: TAAAGTCTCCCTGGACAATCAAGAAGCTACTATTGT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAACTTGGGCTGCTTTTTaGCAAATGCTGGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRTWAAF*QMLESP
Trigger: TGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGACTTGGGCTGCTTTTTaGCAAATGCTGGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLTWAAF*QMLESP
Trigger: TGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAATTTCCGATGAAGGCTaGGCTATTACTACCAACGGC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRISDEG*AITTNG
Trigger: GCCGTTGGTAGTAATAGCTCAGCCTTCATCGGAAAT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTATTTCCGATGAAGGCTaGGCTATTACTACCAACGGC +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIISDEG*AITTNG
Trigger: GCCGTTGGTAGTAATAGCTCAGCCTTCATCGGAAAT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAAGCGGCATTTCCGATaGAGGCTGAGCTATTACTAC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRKRHFR*RLSYYY
Trigger: GTAGTAATAGCTCAGCCTTCATCGGAAATGCCGCTT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCCTTCCTCCTTGTCTTaGACTGGTGTCATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLPSSLS*TGVIPL
Trigger: TAAAGGGATGACACCAGTTCAAGACAAGGAGGAAGG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAATCCAAGTTCTCGGATaGACTCTGCTATCATTGGGG +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRIQVLG*TLLSLG
Trigger: CCCCAATGATAGCAGAGTTCATCCGAGAACTTGGAT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTATCCAAGTTCTCGGATaGACTCTGCTATCATTGGGG +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIIQVLG*TLLSLG
Trigger: CCCCAATGATAGCAGAGTTCATCCGAGAACTTGGAT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCCACTTGTTCTTCACTaGGGAGGATATTATCAGAAT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDPLVLH*GGYYQN
Trigger: ATTCTGATAATATCCTCCTCAGTGAAGAACAAGTGG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp AATTCGCTGAACACCTTGCAGTTTCCCAATTTTTCCTTCAATAGTGCTAGTACACCTCTTCCACAAGTTTaGCAATTTGAGAAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NSLNTLQFPNFSFNSASTPLPQV*QFEKGL
Trigger: CAACCCTTTCTCAAATTGTCAAACTTGTGGAAGAGG...TGTACTAGCACTATTGAAGGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTACTCCCGGTTACCAATaGGGACTTTATACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAITPGYQ*GLYTAE
Trigger: CTCAGCAGTATAAAGTCCTCATTGGTAACCGGGAGT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACGTTTCCCCTCCTCTTaGAGTTGCTTCACTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRRFPSS*SCFTLA
Trigger: TGCTAAAGTGAAGCAACTTCAAGAGGAGGGGAAACG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATGCTGTGTCAGTGCATaGCAAGTTAAACTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIACCVSA*QVKLAA
Trigger: TGCTGCCAGTTTAACTTGTCATGCACTGACACAGCA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp GTTGCAAAGTGGTGGTCCATAACCATCATATATATCATCAGCCCCATTACAGGAGGCTGGCTCAACATTTaGAAATCAATCAGTGTAATT +
Preference number: 4 (lower is better)
Translates to: VAKWWSITIIYIISPITGGWLNI*KSISVI
Trigger: AATTACACTGATTGATTTTCAAATGTTGAGCCAGCC...TCCTGTAATGGGGCTGATGATATATATGATGGTTATGGACCACCACTTTGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp CGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTCCCATAGCTTCAATCTaGTTTTTCATTTCCTCTACT +
Preference number: 4 (lower is better)
Translates to: RMNSAIIGGCITAGLYLTPIASI*FFISST
Trigger: AGTAGAGGAAATGAAAAAGCAGATTGAAGCTATGGG...AGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp GGGGGTGTGTCAAAGAAAGTAATAGGGTTCACTTTGGCTCTCTCATACATTGCACTAAAGAAACTACTATaGTGCTTACATATTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GGVSKKVIGFTLALSYIALKKLL*CLHIGV
Trigger: CACTCCAATATGTAAGCAGCATAGTAGTTTCTTTAG...TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTACTTTCTTTGACACACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGATTATACCTTACTTCTaGCTTGCCAGCCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLIIPYF*LASHQG
Trigger: GCCCTGATGGCTGGCAAGGCAGAAGTAAGGTATAAT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAATTATACCTTACTTCTaGCTTGCCAGCCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAIIPYF*LASHQG
Trigger: GCCCTGATGGCTGGCAAGGCAGAAGTAAGGTATAAT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACATTATGGTGAAGAGTTaGAAAGTGGTGGTCCATAAC +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDIMVKS*KVVVHN
Trigger: GTTATGGACCACCACTTTGCAACTCTTCACCATAAT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AAATTAACTTTGCAAGAGCCTCTGATGTTTTGCCCTTTGCTATATGTTCCAGCCATTATGGTGAAGAGTTaGAAAGTGGTGGTCCATAAC +
Preference number: 4 (lower is better)
Translates to: KLTLQEPLMFCPLLYVPAIMVKS*KVVVHN
Trigger: GTTATGGACCACCACTTTGCAACTCTTCACCATAAT...GGCTGGAACATATAGCAAAGGGCAAAACATCAGAGGCTCTTGCAAAGTTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR GCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGGAGCCTCTGATGTTTTaGCCTGTACAGGTACACACA +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLEPLMF*PVQVHT
Trigger: TGTGTGTACCTGTACAGGGCAAAACATCAGAGGCTC...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAGAAAGGGTTGTGTCTaGTCCAACATGTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRRKGCV*SNMCCA
Trigger: TGCGCAACACATGTTGGAGCAGACACAACCCTTTCT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAGGCTTCACTGTGTCTaGAATGGCTATCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRRLHCV*NGYQAT
Trigger: TGTGGCTTGATAGCCATTGCAGACACAGTGAAGCCT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTTGTTGTAAACCTCACTaGTCTACCTTATCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTACCKPH*STLSVV
Trigger: AACAACAGATAAGGTAGAGCAGTGAGGTTTACAACA...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTATTTAAGTTTAAGGTaGCACATAGGTGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVYLSLR*HIGESE
Trigger: TTCAGACTCACCTATGTGGCACCTTAAACTTAAATA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAGAACTCATGCTTTGTaGTCTATCTGGTTACTCATA +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRRTHAL*SIWLLI
Trigger: TATGAGTAACCAGATAGAGCACAAAGCATGAGTTCT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTGTCTTATGCTTCAGTaGTTTATAAGCCTGAATGTA +
Preference number: 4 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVCLMLQ*FISLNV
Trigger: TACATTCAGGCTTATAAAGCACTGAAGCATAAGACA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACAAAGAGTAGGCAAATaGAATGGTGGTTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRQRVGK*NGGCQH
Trigger: GTGCTGGCAACCACCATTGCATTTGCCTACTCTTTG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR CCA 90 bp AAGGTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGATCCTCATTACATTCCTaGTTTCTCTATCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: KVSVSSSCLQYLVMAVPRSSLHS*FLYPMV
Trigger: AACCATAGGATAGAGAAACCAGGAATGTAATGAGGA...TCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGATTCACACCCATACTTaGATCCATTTTGATTTCCTC +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRIHTHT*IHFDFL
Trigger: GAGGAAATCAAAATGGATCCAAGTATGGGTGTGAAT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTTGGCTGTTGAATCATTaGTATATGATGGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAWLLNH*YMMDSF
Trigger: AAAGGAGTCCATCATATACCAATGATTCAACAGCCA...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAGAGTTGCAAAGTGGTaGTCCATAACCATCATATAT +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRRVAKW*SITIIY
Trigger: ATATATGATGGTTATGGACCACCACTTTGCAACTCT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTGGAAATTTGCCTCCTaGAACTACTTTAATGATATC +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNWKFAS*NYFNDI
Trigger: GATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ACACGTCATTCCCCTCACAACAAGTTCCAAAACACCATCTCCTTCATCAGCATTTGGAAATTTGCCTCCTaGAACTACTTTAATGATATC +
Preference number: 4 (lower is better)
Translates to: TRHSPHNKFQNTISFISIWKFAS*NYFNDI
Trigger: GATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCA...AATGCTGATGAAGGAGATGGTGTTTTGGAACTTGTTGTGAGGGGAATGACGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAGCAGTGACCCGTTCTaGTTAATGGAACCAGCAATC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRSSDPF*LMEPAI
Trigger: GATTGCTGGTTCCATTAACCAGAACGGGTCACTGCT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AATTCGCTGAACACCTTGCAGTTTCCCAATTTTTCCTTCAATAGTGCTAGTACATTGTCTGCAAACTGCTaGATAGGAGCCTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: NSLNTLQFPNFSFNSASTLSANC*IGAFDV
Trigger: AACATCAAAGGCTCCTATCCAGCAGTTTGCAGACAA...TGTACTAGCACTATTGAAGGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTACTGTGATAGAGGCTTaGAAAGCAAATCGTATTATC +
Preference number: 4 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTATVIEA*KANRII
Trigger: GATAATACGATTTGCTTTCCAAGCCTCTATCACAGT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATCACTGTGTCTGCAATaGCTATCAAGCCACACAGCT +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRSLCLQ*LSSHTA
Trigger: AGCTGTGTGGCTTGATAGCCATTGCAGACACAGTGA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTCACTGTGTCTGCAATaGCTATCAAGCCACACAGCT +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAISLCLQ*LSSHTA
Trigger: AGCTGTGTGGCTTGATAGCCATTGCAGACACAGTGA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACAAACTCCAGCAGCTATaGGAATTCCAACCAGATTAT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDKLQQL*EFQPDY
Trigger: ATAATCTGGTTGGAATTCCCATAGCTGCTGGAGTTT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATAAATCCATTTGGCAATaGGAACAAGCTCCTAAATTT +
Preference number: 4 (lower is better)
Translates to: KMGGREPYRPLRSFELQNKSIWQ*EQAPKF
Trigger: AAATTTAGGAGCTTGTTCCCATTGCCAAATGGATTT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGCTTAACTACAGTAGATaGATATTGCACAACATCGTC +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRLNYSR*ILHNIV
Trigger: GACGATGTTGTGCAATATCCATCTACTGTAGTTAAG...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR CAA 72 bp TTGATTGTCCAGGGAGACTTTAATTCGCTGAACACCTaGCAGTTTCCCAATTTTTCCTTCAATAGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: LIVQGDFNSLNT*QFPNFSFNSAS
Trigger: ACTAGCACTATTGAAGGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATTAAAGTCTCCCTGGACAATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATCCCAGTATCTAAACTaGGTTCTGGAACCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIASQYLN*VLEPAL
Trigger: AAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGTCCCAGTATCTAAACTaGGTTCTGGAACCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLSQYLN*VLEPAL
Trigger: AAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGA...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAATAGTGCTAGTACATaGATGGCAGGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIANSAST*MAGHPF
Trigger: GAAGGGATGACCTGCCATTCATGTACTAGCACTATT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAGGATTCTGGAGTGACTaGGCTTGCATTATACTTCAC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRGFWSD*ACIILH
Trigger: GTGAAGTATAATGCAAGCTCAGTCACTCCAGAATCC...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGTCAGGGATTCTGGAGTaGCTGAGCTTGCATTATACT +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLSGILE*LSLHYT
Trigger: AGTATAATGCAAGCTCAGTCACTCCAGAATCCCTGA...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATCAGGGATTCTGGAGTaGCTGAGCTTGCATTATACT +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIASGILE*LSLHYT
Trigger: AGTATAATGCAAGCTCAGTCACTCCAGAATCCCTGA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCTGACCGATCCTTCTTaGCCAAAGAAGCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLLTDPS*PKKLQN
Trigger: GTTTTGAAGCTTCTTTGGTCAAGAAGGATCGGTCAG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTTACTGGCATCAATTTaGACCAGGGATGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDLLASI*TRDAFL
Trigger: TAAAAATGCATCCCTGGTTCAAATTGATGCCAGTAA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTTATCCGAATCCTCTTaGCTGTCTTTCTTGATAAGT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDLSESS*LSFLIS
Trigger: ACTTATCAAGAAAGACAGTCAAGAGGATTCGGATAA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAGTGAAGGTAACATCATaGATGCTGTGTCAGTGCATG +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRVKVTS*MLCQCM
Trigger: CATGCACTGACACAGCATTCATGATGTTACCTTCAC...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACGATATGCAAACCCATTaGTATTTCAGTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDDMQTH*YFSEMG
Trigger: ACCCATTTCACTGAAATATCAATGGGTTTGCATATC...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCTTTGCAAGAGCCTCTaGTGTTTTGCCCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLLCKSL*CFALCY
Trigger: ATAGCAAAGGGCAAAACATCAGAGGCTCTTGCAAAG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCCCATAGCTTCAATCTaGTTTTTCATTTCCTCTACT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDPIASI*FFISST
Trigger: AGTAGAGGAAATGAAAAAGCAGATTGAAGCTATGGG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGCTAAAGAAACTACTATaGTGCTTACATATTGGAGTG +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRLKKLL*CLHIGV
Trigger: CACTCCAATATGTAAGCAGCATAGTAGTTTCTTTAG...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAGTCCCATTGCTATTTaGAAGGGAGACTCGTATGGA +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIASPIAI*KGDSYG
Trigger: TCCATACGAGTCTCCCTTGCAAATAGCAATGGGACT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTACTCAACAGTCCCATTaGTATTTGCAAGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAITQQSH*YLQGRL
Trigger: GAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTCCCATGTCTTCTATTaGTCCTCTCAACGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAISHVFY*SSQRFW
Trigger: CCAGAAACGTTGAGAGGAGCAATAGAAGACATGGGA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTGTTGTAAACCTCACTaGTCTACCTTATCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDCCKPH*STLSVV
Trigger: AACAACAGATAAGGTAGAGCAGTGAGGTTTACAACA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACAAGAACAAGAACTCATaGTTTGTGCTCTATCTGGTT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDKNKNS*FVLYLV
Trigger: AACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCACAACATCGTCCACTaGTGTTTTCGGTACCAAACA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIHNIVH*CFRYQT
Trigger: TGTTTGGTACCGAAAACAGCAGTGGACGATGTTGTG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACACAACATCGTCCACTaGTGTTTTCGGTACCAAACA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRHNIVH*CFRYQT
Trigger: TGTTTGGTACCGAAAACAGCAGTGGACGATGTTGTG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAAATGCAATGGTGGTTaGCAGCACAATCAGTACGTC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRKCNGG*QHNQYV
Trigger: GACGTACTGATTGTGCTGGCAACCACCATTGCATTT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTCCTCATTACATTCCTaGTTTCTCTATCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDSSLHS*FLYPMV
Trigger: AACCATAGGATAGAGAAACCAGGAATGTAATGAGGA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCAATCTGCTGCTCAATaGTCCAAACACAGGAATTGC +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLQSAAQ*SKHRNC
Trigger: GCAATTCCTGTGTTTGGACCATTGAGCAGCAGATTG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATGTCTGTCACACCCTTaGTCTTCAGCAATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIACLSHP*SSAMCF
Trigger: AAAGCACATTGCTGAAGACCAAGGGTGTGACAGACA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TGGTTCCAGTCTTATCAAATACCACTACCTTTACCTTATGAGCCATCTCCAATGTGGCTGTTGAATCATTaGTATATGATGGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: WFQSYQIPLPLPYEPSPMWLLNH*YMMDSF
Trigger: AAAGGAGTCCATCATATACCAATGATTCAACAGCCA...CATTGGAGATGGCTCATAAGGTAAAGGTAGTGGTATTTGATAAGACTGGAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGCATTATACTTCACAATaGCAGACCTATTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRHYTSQ*QTYSLK
Trigger: CTTTAGAGAATAGGTCTGCCATTGTGAAGTATAATG...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATGACAAGACCATTTCTAATCATCCACTCCCGGTTACCAATGAGGACTTTATACAGAGTTGCAAAGTGGTaGTCCATAACCATCATATAT +
Preference number: 4 (lower is better)
Translates to: MTRPFLIIHSRLPMRTLYRVAKW*SITIIY
Trigger: ATATATGATGGTTATGGACCACCACTTTGCAACTCT...GTATAAAGTCCTCATTGGTAACCGGGAGTGGATGATTAGAAATGGTCTTGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGAATCCTGGAAGAATCTaGCGCTCCAGGAACATAGAA +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLNPGRI*RSRNIE
Trigger: TTCTATGTTCCTGGAGCGCCAGATTCTTCCAGGATT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCACAGCAGTTCCCACAATaGCCAAGATTTTATGGTGTG +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAQQFPQ*PRFYGV
Trigger: CACACCATAAAATCTTGGCCATTGTGGGAACTGCTG...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACGCGCACTTAAAGTTTTaGAAACATCTTGTCTACAGT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDAHLKF*KHLVYS
Trigger: ACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGC...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCTTAACTACAGTAGATaGATATTGCACAACATCGTC +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDLNYSR*ILHNIV
Trigger: GACGATGTTGTGCAATATCCATCTACTGTAGTTAAG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR CAA 72 bp CTAAATCCATTTGGCAATGGGAACAAGCTCCTAAATTaGCCAACCACACTAACTAGGCAAGTTCAAATGTTT +
Preference number: 4 (lower is better)
Translates to: LNPFGNGNKLLN*PTTLTRQVQMF
Trigger: AAACATTTGAACTTGCCTAGTTAGTGTGGTTGGCAAATTTAGGAGCTTGTTCCCATTGCCAAATGGATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCCTCTTCCACAAGTTTaGCAATTTGAGAAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLPLPQV*QFEKGL
Trigger: CAACCCTTTCTCAAATTGTCAAACTTGTGGAAGAGG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGACTTTAGCAACCTTGTaGGAAGGTAGAACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLTLATL*EGRTSA
Trigger: TGCTGAAGTTCTACCTTCTCACAAGGTTGCTAAAGT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAATGAACGCTGATTTCTaGAGGACTCTTCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAMNADF*RTLLSY
Trigger: ATAGGACAGAAGAGTCCTTCAGAAATCAGCGTTCAT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTTATACACAGTGCTTTaGAAGTCATTGCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAILYTVL*KSLLPS
Trigger: ACTGGGGAGCAATGACTTTCAAAGCACTGTGTATAA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACACTGTCCCACAATATaGATACAAGACCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRHCPTI*IQDQED
Trigger: ATCCTCTTGGTCTTGTATTCATATTGTGGGACAGTG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAACTTTTCCAATCTGCTaGTCAATGGTCCAAACACAG +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIATFPIC*SMVQTQ
Trigger: CTGTGTTTGGACCATTGAGCAGCAGATTGGAAAAGT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCACTGCTTTTTGACAAATaGTGGAAAGCCCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIALLFDK*WKAHSF
Trigger: GAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAG...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATTGAGGTACTTGGGCTaGTTTTTGACAAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRLRYLG*FLTNAG
Trigger: TCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATTGAGGTACTTGGGCTaGTTTTTGACAAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIALRYLG*FLTNAG
Trigger: TCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAACACCCTCAATAGACTaGACACAGGAATTACAAGTC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRTPSID*TQELQV
Trigger: GACTTGTAATTCCTGTGTGCAGTCTATTGAGGGTGT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTATTCCGTTCAATGTTTaGTACACAGGAAGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIIPFNV*YTGSAS
Trigger: ACTTGCGCTTCCTGTGTAGCAAACATTGAACGGAAT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATTCTCGGATGAACTCTaGTATCATTGGGGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAFSDEL*YHWGLY
Trigger: ATACAACCCCCAATGATAGCAGAGTTCATCCGAGAA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAGTTTGTCTGCAAACTaGTGGATAGGAGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIASLSAN*WIGAFD
Trigger: ATCAAAGGCTCCTATCCAGCAGTTTGCAGACAAACT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTGTCCAGCTCCTGTTTaGAATATTTGGTTATGGCTG +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAICPAPV*NIWLWL
Trigger: CAGCCATAACCAAATATTGCAAACAGGAGCTGGACA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTTCAATACTACAAGCTaGTATTCCCACTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIFNTTS*YSHCPT
Trigger: TGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAACAGTAGATGGATATTaGACAACATCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRTVDGY*TTSSTA
Trigger: AGCAGTGGACGATGTTGTGCAATATCCATCTACTGT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAATGTGCTTTGGATATaGTCCCATGGCAAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRNVLWI*SHGKVS
Trigger: ACTGACTTTGCCATGGGACCATATCCAAAGCACATT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTAATGTGCTTTGGATATaGTCCCATGGCAAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAINVLWI*SHGKVS
Trigger: ACTGACTTTGCCATGGGACCATATCCAAAGCACATT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCATTATACTTCACAATaGCAGACCTATTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDHYTSQ*QTYSLK
Trigger: CTTTAGAGAATAGGTCTGCCATTGTGAAGTATAATG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTGGAAATTTGCCTCCTaGAACTACTTTAATGATATC +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDWKFAS*NYFNDI
Trigger: GATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACAAATCCATTTGGCAATaGGAACAAGCTCCTAAATTT +
Preference number: 4 (lower is better)
Translates to: IGESEPALDIKVSLLSSDKSIWQ*EQAPKF
Trigger: AAATTTAGGAGCTTGTTCCCATTGCCAAATGGATTT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATTCAGACTAAGGGCATaGTTGCTGAGTGAATACAGA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRFRLRA*LLSEYR
Trigger: TCTGTATTCACTCAGCAACCATGCCCTTAGTCTGAA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAGCTTTGTGCTCTATCTaGTTACTCATACCAGATGGA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRALCSI*LLIPDG
Trigger: TCCATCTGGTATGAGTAACCAGATAGAGCACAAAGC...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
3UTR CAA 72 bp ATTACAAGTCATGCCATCAATGTTTATCACAGTTTCTaGTGTCAGAGGCTGGCTAACTACATTCAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: ITSHAINVYHSF*CQRLANYIQRN
Trigger: ATTCCTTTGAATGTAGTTAGCCAGCCTCTGACACAAGAAACTGTGATAAACATTGATGGCATGACTTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTACAATAGTAGCTTCTTaGTTGTCCAGGGAGACTTTA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAITIVAS*LSRETL
Trigger: TAAAGTCTCCCTGGACAATCAAGAAGCTACTATTGT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCCACTTGTTCTTCACTaGGGAGGATATTATCAGAAT +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIPLVLH*GGYYQN
Trigger: ATTCTGATAATATCCTCCTCAGTGAAGAACAAGTGG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGACAAGTTTGACAATTTaGGAAAGGGTTGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLTSLTI*ERVVSA
Trigger: AGCAGACACAACCCTTTCTCAAATTGTCAAACTTGT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTTCACTTTTCCAATCTaGTGCTCAATGGTCCAAACA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIFTFPI*CSMVQT
Trigger: TGTTTGGACCATTGAGCAGCAGATTGGAAAAGTGAA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAGGGATTATTGTCACTaGTACAGTTCTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIARDYCH*YSSFLR
Trigger: CCTCAGAAAAGAACTGTAGCAGTGACAATAATCCCT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAGGGATTATTGTCACTaGTACAGTTCTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRRDYCH*YSSFLR
Trigger: CCTCAGAAAAGAACTGTAGCAGTGACAATAATCCCT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTGTCATATTTAATATGTaGTTTGTTGGTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIVIFNM*FVGCQG
Trigger: GCCCTGGCAACCAACAAAGCACATATTAAATATGAC...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCTCCTTGTCTTGAACTaGTGTCATCCCTTTAGTATA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAILLVLN*CHPFSI
Trigger: TATACTAAAGGGATGACACCAGTTCAAGACAAGGAG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCACATTTTCTATCACAGTaGCTCCAAATCCAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAHFLSQ*LQIQVL
Trigger: GAGAACTTGGATTTGGAGCCACTGTGATAGAAAATG...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATCCATACCAAGAGGGTaGCAATGGAAACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRSIPRG*QWKQKQ
Trigger: TTGTTTTTGTTTCCATTGCCACCCTCTTGGTATGGA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATGCAATATTTGGTTATaGCTGTTCCTAGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIACNIWL*LFLEGV
Trigger: AACACCCTCTAGGAACAGCCATAACCAAATATTGCA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTAGTCTGAACCGGCACTaGATATTAAAGTATCCTTGT +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAISLNRH*ILKYPC
Trigger: ACAAGGATACTTTAATATCCAGTGCCGGTTCAGACT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAACCAGCTCTTTTATCTaGTTGGCATTCACTATAGAA +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIATSSFI*LAFTIE
Trigger: TTCTATAGTGAATGCCAATCAGATAAAAGAGCTGGT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTTACTGGCATCAATTTaGACCAGGGATGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAILLASI*TRDAFL
Trigger: TAAAAATGCATCCCTGGTTCAAATTGATGCCAGTAA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTTATCCGAATCCTCTTaGCTGTCTTTCTTGATAAGT +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAILSESS*LSFLIS
Trigger: ACTTATCAAGAAAGACAGTCAAGAGGATTCGGATAA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATTTAGGAGAATTCCTTaGGGTATCATCTATTCCAAC +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAFRRIP*GIIYSN
Trigger: GTTGGAATAGATGATACCTCAAGGAATTCTCCTAAA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGTCAGAGCTGATGCCTTaGAAAAGATATTTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLSELMP*KRYFCQ
Trigger: TTGGCAAAAATATCTTTTTCAAGGCATCAGCTCTGA...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAACACACCATACATCTTaGGACTACAATACTACTACT +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRTHHTS*DYNTTT
Trigger: AGTAGTAGTATTGTAGTCTCAAGATGTATGGTGTGT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR TCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTAAAACCCAAAAGGAGTaGTTCCAGGAATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIKTQKE*FQECLY
Trigger: ATAAAGACATTCCTGGAATCACTCCTTTTGGGTTTT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGATTCACACCCATACTTaGATCCATTTTGATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLIHTHT*IHFDFL
Trigger: GAGGAAATCAAAATGGATCCAAGTATGGGTGTGAAT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATGGCTGTTGAATCATTaGTATATGATGGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAWLLNH*YMMDSF
Trigger: AAAGGAGTCCATCATATACCAATGATTCAACAGCCA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTACTGTGATAGAGGCTTaGAAAGCAAATCGTATTATC +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAITVIEA*KANRII
Trigger: GATAATACGATTTGCTTTCCAAGCCTCTATCACAGT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTAGAGCATTTGAGATCTaGGCATCAATAATCATGGAA +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIRAFEI*ASIIME
Trigger: TTCCATGATTATTGATGCCCAGATCTCAAATGCTCT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGGCGCACTTAAAGTTTTaGAAACATCTTGTCTACAGT +
Preference number: 4 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLAHLKF*KHLVYS
Trigger: ACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGC...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCTAAAGAAACTACTATaGTGCTTACATATTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAILKKLL*CLHIGV
Trigger: CACTCCAATATGTAAGCAGCATAGTAGTTTCTTTAG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTATGTTTTATACACAGTaGTTTGAAAGTCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIMFYTQ*FESHCS
Trigger: GGAGCAATGACTTTCAAAGCACTGTGTATAAAACAT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAATGTTTTATACACAGTaGTTTGAAAGTCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRMFYTQ*FESHCS
Trigger: GGAGCAATGACTTTCAAAGCACTGTGTATAAAACAT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR GCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATATTTAAGTTTAAGGTaGCACATAGGTGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRYLSLR*HIGESE
Trigger: TTCAGACTCACCTATGTGGCACCTTAAACTTAAATA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CCA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAATGCTGCTTACATATTaGAGTGCAGATAAAGTACTT +
Preference number: 4 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRMLLTY*SADKVL
Trigger: AAGTACTTTATCTGCACTCCAATATGTAAGCAGCAT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS GCA 90 bp CTCCAACAAAGCTCACACAATCGGAGAAGTCACAGTAGCTGCGGCTaGGGCGGCGGCAGCAACAACTCCTCCCTCTGCTTCTCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: LQQSSHNRRSHSSCG*GGGSNNSSLCFSFP
Trigger: GGGAAAAGAGAAGCAGAGGGAGGAGTTGTTGCTGCCGCCGCCGCAGCCGCAGCTACTGTGACTTCTCCGATTGTGTGAGCTTTGTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343533.9
CDS CCA 90 bp TGCTCAGTTTCCTCATCTGGTTTCTCTATCCTATGGTTAAACCTCTaGAGCTACGCAGACCGTGGCAGCGATAAATCCACGTACGCAGGC +
Preference number: 5 (lower is better)
Translates to: CSVSSSGFSILWLNL*SYADRGSDKSTYAG
Trigger: GCCTGCGTACGTGGATTTATCGCTGCCACGGTCTGCGTAGCTCCAGAGGTTTAACCATAGGATAGAGAAACCAGATGAGGAAACTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642523.1
ENST00000642651.1
ENST00000645454.1
CDS-3UTR CAA 90 bp CACAACCTGGAAATCTATGCAGGTACCCAAGGTTTCAGTGTCCAGCTCCTGTTTCAGTCCCATTGCTATTaGCAAGGGAGACTCGTATGG +
Preference number: 5 (lower is better)
Translates to: HNLEIYAGTQGFSVQLLFQSHCY*QGRLVW
Trigger: CCATACGAGTCTCCCTTGCAAATAGCAATGGGACTG...AAACAGGAGCTGGACACTGAAACCTTGGGTACCTGCATAGATTTCCAGGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTATGTGCTTTGTTGGTaGCCAGGGCCACGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNYVLCW*PGPRSS
Trigger: ACTGCTCCGTGGCCCTGGCAACCAACAAAGCACATA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTTCCATCTCCCACCATaGCTACCCGTTTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNFHLPP*LPVSPP
Trigger: AGGAGGGGAAACGGGTAGCAATGGTGGGAGATGGAA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCCAGCCATCGGCCTAGTGCAATAAACACAAACAGCATAGGGGGTGTGTCAAAGCAAATGCAATGGTGGTaGCCAGCACAATCAGTACGT +
Preference number: 5 (lower is better)
Translates to: SSHRPSAINTNSIGGVSKQMQWW*PAQSVR
Trigger: ACGTACTGATTGTGCTGGCAACCACCATTGCATTTG...CTTTGACACACCCCCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS GCA 90 bp AATGCAGTGTCATCATCTTCCCTGAAGTCTCCCACCAGGAGTGAGTaGTTGTCAGGTTCACTGGTAACAACACTGTTTAGGGAGCGTTTA +
Preference number: 5 (lower is better)
Translates to: NAVSSSSLKSPTRSE*LSGSLVTTLFRERL
Trigger: TAAACGCTCCCTAAACAGTGTTGTTACCAGTGAACCTGACAAGCACTCACTCCTGGTGGGAGACTTCAGGGAAGATGATGACACTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS-3UTR CAA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGCTTCAGCAATGTGCTTaGGATATGGTCCCATGGCAA +
Preference number: 5 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGLQQCA*DMVPWQ
Trigger: TTGCCATGGGACCATATCCAAAGCACATTGCTGAAG...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp GACCCGTTCTGGTTAATGGAACCAGCAATCACTGTGCTGCCAGGTTTCTTAGCCCCCAATTTGAGGTACTaGGGCTGCTTTTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: DPFWLMEPAITVLPGFLAPNLRY*GCFLTN
Trigger: ATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGG...GGCTAAGAAACCTGGCAGCACAGTGATTGCTGGTTCCATTAACCAGAACGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AATTTGAGGTACTTGGGCTGCTTTTTGACAAATGCTGGAAAGCCCATAGCTTCATATGTGCTTTGTTGGTaGCCAGGGCCACGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: NLRYLGCFLTNAGKPIASYVLCW*PGPRSS
Trigger: ACTGCTCCGTGGCCCTGGCAACCAACAAAGCACATA...TGAAGCTATGGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTACCTCAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTTCCATCTCCCACCATaGCTACCCGTTTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRFHLPP*LPVSPP
Trigger: AGGAGGGGAAACGGGTAGCAATGGTGGGAGATGGAA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTCAGATGAAGCAGCCATaGCTGCAGATCCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAQMKQP*LQIPSR
Trigger: CCTGGATGGGATCTGCAGCAATGGCTGCTTCATCTG...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp GTCTTCAGCAATGTGCTTTGGATATGGTCCCATGGCAAAGTCAGTGACGCCGTAAGAGCCTCTGATGTTTaGCCCTTTGCTATATGTTCC +
Preference number: 5 (lower is better)
Translates to: VFSNVLWIWSHGKVSDAVRASDV*PFAICS
Trigger: GGAACATATAGCAAAGGGCAAAACATCAGAGGCTCT...TACGGCGTCACTGACTTTGCCATGGGACCATATCCAAAGCACATTGCTGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp CACAACCTGGAAATCTATGCAGGTACCCAAGGTTTCAGTGTCCAGCTCCTGTTTTCAATAGCTCCCAATTaGAGGTACTTGGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: HNLEIYAGTQGFSVQLLFSIAPN*RYLGCF
Trigger: AAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGA...AAACAGGAGCTGGACACTGAAACCTTGGGTACCTGCATAGATTTCCAGGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCAGTCCCATTGCTATTaGCAAGGGAGACTCGTATGG +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNQSHCY*QGRLVW
Trigger: CCATACGAGTCTCCCTTGCAAATAGCAATGGGACTG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AGGATCCCTCTGTGTTTTGTGAGACTAGACTCTATTTTATGTACGCAGGAGGCATTAATATGTGCTTTGTaGGTTGCCAGGGCCACGGAG +
Preference number: 5 (lower is better)
Translates to: RIPLCFVRLDSILCTQEALICAL*VARATE
Trigger: CTCCGTGGCCCTGGCAACCAACAAAGCACATATTAA...TGCCTCCTGCGTACATAAAATAGAGTCTAGTCTCACAAAACACAGAGGGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTATTTAATATGTGCTTaGTTGGTTGCCAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGYLICA*LVARAT
Trigger: CGTGGCCCTGGCAACCAACAAAGCACATATTAAATA...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp TATCACAGTGGCTCCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGCAATTTGAGAAAGGGTaGTGTCTGCTCCAACATGTG +
Preference number: 5 (lower is better)
Translates to: YHSGSKSKFSDELCYHWGQFEKG*CLLQHV
Trigger: CACATGTTGGAGCAGACACAACCCTTTCTCAAATTG...CCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp GTCTTCAGCAATGTGCTTTGGATATGGTCCCATGGCAAAGTCAGTGACGCCGTATCATGGAAGACGAAGTaGATGACTGTTCATTACTGG +
Preference number: 5 (lower is better)
Translates to: VFSNVLWIWSHGKVSDAVSWKTK*MTVHYW
Trigger: CCAGTAATGAACAGTCATCAACTTCGTCTTCCATGA...TACGGCGTCACTGACTTTGCCATGGGACCATATCCAAAGCACATTGCTGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS CCA 90 bp CTTCAGCAAATTGTTTGGTCTCTTCTGATGCTCAGTTTCCTCATCTaGTTTCTCTATCCTATGGTTAAACCTCTGGAGCTACGCAGACCG +
Preference number: 5 (lower is better)
Translates to: LQQIVWSLLMLSFLI*FLYPMVKPLELRRP
Trigger: CGGTCTGCGTAGCTCCAGAGGTTTAACCATAGGATAGAGAAACCAGATGAGGAAACTGAGCATCAGAAGAGACCAAACAATTTGCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642523.1
ENST00000642651.1
ENST00000645454.1
CDS CCA 90 bp CAATGCCCAGGGAAGATGCTGAAGAAGGGTCTTCAGCAAATTGTTTaGTCTCTTCTGATGCTCAGTTTCCTCATCTGGTTTCTCTATCCT +
Preference number: 5 (lower is better)
Translates to: QCPGKMLKKGLQQIV*SLLMLSFLIWFLYP
Trigger: AGGATAGAGAAACCAGATGAGGAAACTGAGCATCAGAAGAGACCAAACAATTTGCTGAAGACCCTTCTTCAGCATCTTCCCTGGGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCTTCAGCAATGTGCTTaGGATATGGTCCCATGGCAA +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVLQQCA*DMVPWQ
Trigger: TTGCCATGGGACCATATCCAAAGCACATTGCTGAAG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTATGTCTGTCACACCCTaGGTCTTCAGCAATGTGCTT +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVMSVTP*VFSNVL
Trigger: AAGCACATTGCTGAAGACCAAGGGTGTGACAGACAT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAGCTGGAGGGAGAGTTaGAGGTACTCTCAACTTCAC +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTASWRES*RYSQLH
Trigger: GTGAAGTTGAGAGTACCTCAAACTCTCCCTCCAGCT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGGTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAAGCTGGAGGGAGAGTTaGAGGTACTCTCAACTTCAC +
Preference number: 5 (lower is better)
Translates to: KVSVSSSCLQYLVMAVPRSWRES*RYSQLH
Trigger: GTGAAGTTGAGAGTACCTCAAACTCTCCCTCCAGCT...TCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGTACTCAACAGTCCCATaGCTATTTGCAAGGGAGACT +
Preference number: 5 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGYSTVP*LFARET
Trigger: AGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTA...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTTAATATGTGCTTTGTaGGTTGCCAGGGCCACGGAG +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRLICAL*VARATE
Trigger: CTCCGTGGCCCTGGCAACCAACAAAGCACATATTAA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAGAGCTGGGGAGTCATaGATTCCATCTCCCACCATT +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRRAGES*IPSPTI
Trigger: AATGGTGGGAGATGGAATCAATGACTCCCCAGCTCT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTAGAGCTGGGGAGTCATaGATTCCATCTCCCACCATT +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTARAGES*IPSPTI
Trigger: AATGGTGGGAGATGGAATCAATGACTCCCCAGCTCT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGACCAGGAGTGAGTGCTaGTCAGGTTCACTGGTAACA +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRTRSEC*SGSLVT
Trigger: TGTTACCAGTGAACCTGACAAGCACTCACTCCTGGT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGCCTCATTACATTCATTaGACGGCAAGCTCTTCCACT +
Preference number: 5 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVPHYIH*TASSST
Trigger: AGTGGAAGAGCTTGCCGTCAAATGAATGTAATGAGG...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTCTTCAGCAATGTGCTTaGGATATGGTCCCATGGCAA +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTALQQCA*DMVPWQ
Trigger: TTGCCATGGGACCATATCCAAAGCACATTGCTGAAG...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTATGTCTGTCACACCCTaGGTCTTCAGCAATGTGCTT +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAMSVTP*VFSNVL
Trigger: AAGCACATTGCTGAAGACCAAGGGTGTGACAGACAT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp GACTTTTTCTCCAGTGTCCCAGTATCTAAACTGAGTTCTGGAACCAGCTCTTTTCACGACTTCACCAGCTaGAGCCATACTATGATCTTC +
Preference number: 5 (lower is better)
Translates to: DFFSSVPVSKLSSGTSSFHDFTS*SHTMIF
Trigger: GAAGATCATAGTATGGCTCAAGCTGGTGAAGTCGTG...AAAAGAGCTGGTTCCAGAACTCAGTTTAGATACTGGGACACTGGAGAAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTACTTGGGCTGCTTTTaGACAAATGCTGGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRYLGCF*TNAGKP
Trigger: GGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTCAATAGCTCCCAATTaGAGGTACTTGGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVSIAPN*RYLGCF
Trigger: AAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AGGATCCCTCTGTGTTTTGTGAGACTAGACTCTATTTTATGTACGCAGGAGGCAGTGATACAGCCTCTATaGCTTTTCTCAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: RIPLCFVRLDSILCTQEAVIQPL*LFSGIL
Trigger: CAGAATCCCTGAGAAAAGCAATAGAGGCTGTATCAC...TGCCTCCTGCGTACATAAAATAGAGTCTAGTCTCACAAAACACAGAGGGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACAGCTGGAGGGAGAGTTaGAGGTACTCTCAACTTCAC +
Preference number: 5 (lower is better)
Translates to: IGESEPALDIKVSLLSSDSWRES*RYSQLH
Trigger: GTGAAGTTGAGAGTACCTCAAACTCTCCCTCCAGCT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGTTTATCACAGTTTCTaGTGTCAGAGGCTGGCTAAC +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNVYHSF*CQRLAN
Trigger: GTTAGCCAGCCTCTGACACAAGAAACTGTGATAAAC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCAGTCCCATTGCTATTaGCAAGGGAGACTCGTATGG +
Preference number: 5 (lower is better)
Translates to: IGESEPALDIKVSLLSSDQSHCY*QGRLVW
Trigger: CCATACGAGTCTCCCTTGCAAATAGCAATGGGACTG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTACTCAACAGTCCCATaGCTATTTGCAAGGGAGACT +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVYSTVP*LFARET
Trigger: AGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATATCCCATGTCTTCTATaGCTCCTCTCAACGTTTCTG +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNIPCLL*LLSTFL
Trigger: CAGAAACGTTGAGAGGAGCAATAGAAGACATGGGAT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTTCCTTCCTCCTTGTCTaGAACTGGTGTCATCCCTTT +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTASFLLV*NWCHPF
Trigger: AAAGGGATGACACCAGTTCAAGACAAGGAGGAAGGA...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTAATTCCGTTCAATGTTaGCTACACAGGAAGCGCAAG +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVNSVQC*LHRKRK
Trigger: CTTGCGCTTCCTGTGTAGCAAACATTGAACGGAATT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGCTGACCGATCCTTCTaGACCAAAGAAGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVADRSF*TKEASK
Trigger: TTTTGAAGCTTCTTTGGTCAAGAAGGATCGGTCAGC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTAAGTTCCACATCCACTaGTTCTTCACTGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVKFHIH*FFTEED
Trigger: ATCCTCCTCAGTGAAGAACAAGTGGATGTGGAACTT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp GTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGAATGATATCTCCACGTaGTACAAGTTCCACATCCAC +
Preference number: 5 (lower is better)
Translates to: VSVSSSCLQYLVMAVPRGNDIST*YKFHIH
Trigger: GTGGATGTGGAACTTGTACAACGTGGAGATATCATT...CCCTCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCCATCCACTGGAAATTaGCCTCCTGGAACTACTTTA +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVPSTGN*PPGTTL
Trigger: TAAAGTAGTTCCAGGAGGCAAATTTCCAGTGGATGG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCACCATCCACTGGAAATTaGCCTCCTGGAACTACTTTA +
Preference number: 5 (lower is better)
Translates to: PNPSSRMNSAIIGGCITAPSTGN*PPGTTL
Trigger: TAAAGTAGTTCCAGGAGGCAAATTTCCAGTGGATGG...TGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATCAATTTGAGAAAGGGTaGTGTCTGCTCCAACATGTG +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNQFEKG*CLLQHV
Trigger: CACATGTTGGAGCAGACACAACCCTTTCTCAAATTG...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTCCCCTCCTCTTGAAGTaGCTTCACTTTAGCAACCTT +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAPLLLK*LHFSNL
Trigger: AAGGTTGCTAAAGTGAAGCAACTTCAAGAGGAGGGG...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGGCTGTGTTCAACTGCTaGAGGTGGGTGGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLAVFNC*RWVGGR
Trigger: TCTCCCTCCCACCCACCTCAAGCAGTTGAACACAGC...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTAGACTAAGGGCATGGTaGCTGAGTGAATACAGAAGA +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVRLRAW*LSEYRR
Trigger: TCTTCTGTATTCACTCAGCAACCATGCCCTTAGTCT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTTGAGACGCCTGGTTTaGGCTACAAAAGGCATTTGT +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNLRRLV*ATKGIC
Trigger: ACAAATGCCTTTTGTAGCCAAAACCAGGCGTCTCAA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTCAAATGCAATGGTGGTaGCCAGCACAATCAGTACGT +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAQMQWW*PAQSVR
Trigger: ACGTACTGATTGTGCTGGCAACCACCATTGCATTTG...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATAGAGCCTCTGATGTTTaGCCCTTTGCTATATGTTCC +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNRASDV*PFAICS
Trigger: GGAACATATAGCAAAGGGCAAAACATCAGAGGCTCT...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR CAA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGTCTTCAGCAAATTGTTaGGTCTCTTCTGATGCTCAG +
Preference number: 5 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVSSANC*VSSDAQ
Trigger: CTGAGCATCAGAAGAGACCAAACAATTTGCTGAAGA...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTAATTCGCTGAACACCTaGCAGTTTCCCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVNSLNT*QFPNFS
Trigger: GGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp GTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGTGTTCACTGTTACTTTCAGTACTTGGGCTGCTTTTaGACAAATGCTGGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: VCNIWLWLFLEGVHCYFQYLGCF*TNAGKP
Trigger: GGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTA...CTGAAAGTAACAGTGAACACCCTCTAGGAACAGCCATAACCAAATATTGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGTGATACAGCCTCTATaGCTTTTCTCAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRVIQPL*LFSGIL
Trigger: CAGAATCCCTGAGAAAAGCAATAGAGGCTGTATCAC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATATGTGCTTTGTTGGTaGCCAGGGCCACGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAYVLCW*PGPRSS
Trigger: ACTGCTCCGTGGCCCTGGCAACCAACAAAGCACATA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AGTCATGCCATCAATGTTTATCACAGTTTCTTGTGTCAGAGGCTGGCTAACTACAAGTTCCACATCCACTaGTTCTTCACTGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SHAINVYHSFLCQRLANYKFHIH*FFTEED
Trigger: ATCCTCCTCAGTGAAGAACAAGTGGATGTGGAACTT...GTAGTTAGCCAGCCTCTGACACAAGAAACTGTGATAAACATTGATGGCATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp GAGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTCACAAGTTTGACAATTaGAGAAAGGGTTGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: EDHTQQSHCYLQGRLVWIHKFDN*RKGCVC
Trigger: GCAGACACAACCCTTTCTCAAATTGTCAAACTTGTG...AATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp CGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAGGATTATACCTTACTGTGTCCAGCTCCTGTTaGCAATATTTGGTTATGGCT +
Preference number: 5 (lower is better)
Translates to: RMNSAIIGGCITAGLYLTVSSSC*QYLVMA
Trigger: AGCCATAACCAAATATTGCAAACAGGAGCTGGACAC...AGTAAGGTATAATCCTGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTTCATGGAAGACGAAGTaGATGACTGTTCATTACTGG +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVSWKTK*MTVHYW
Trigger: CCAGTAATGAACAGTCATCAACTTCGTCTTCCATGA...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTCTAGCTGTTTTACTGTaGTCTCCAGTCATCAGAACT +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVLAVLL*SPVIRT
Trigger: AGTTCTGATGACTGGAGACAACAGTAAAACAGCTAG...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCAGATGAAGCAGCCATaGCTGCAGATCCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIQMKQP*LQIPSR
Trigger: CCTGGATGGGATCTGCAGCAATGGCTGCTTCATCTG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGGGCAGGGAGAATTCCTaGAATCCGGTAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLGRENS*NPVGRG
Trigger: ACCTCTGCCTACCGGATTCAAGGAATTCTCCCTGCC...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATGTAATAGGGTTCACTTaGGCTCTCTCATACATTGCA +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNVIGFT*ALSYIA
Trigger: TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTAC...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR CAA 90 bp CCAAATCCAAGTTCTCGGATGAACTCTGCTATCATTGGGGGTTGTATAACAGCAGTAATAGGGTTCACTTaGGCTCTCTCATACATTGCA +
Preference number: 5 (lower is better)
Translates to: PNPSSRMNSAIIGGCITAVIGFT*ALSYIA
Trigger: TGCAATGTATGAGAGAGCCAAAGTGAACCCTATTAC...TGCTGTTATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGCTGATGTTTTGCCCTTaGCTATATGTTCCAGCCATC +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRLMFCP*LYVPAI
Trigger: GATGGCTGGAACATATAGCAAAGGGCAAAACATCAG...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS CCA 90 bp GAAGGTAACATCATGAATGCTGTGTCAGTGCATGACAAGTTAAACTaGCAGCACTCTCCATGGCCTTTTATAATGCAGTGTCATCATCTT +
Preference number: 5 (lower is better)
Translates to: EGNIMNAVSVHDKLN*QHSPWPFIMQCHHL
Trigger: AAGATGATGACACTGCATTATAAAAGGCCATGGAGAGTGCTGCCAGTTTAACTTGTCATGCACTGACACAGCATTCATGATGTTACCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAATTCGCTGAACACCTaGCAGTTTCCCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRNSLNT*QFPNFS
Trigger: GGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGCCCAATTTGAGGTACTaGGGCTGCTTTTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRPNLRY*GCFLTN
Trigger: ATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGG...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTGTGGCTGTTGAATCATaGGTATATGATGGACTCCTT +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAVAVES*VYDGLL
Trigger: AAGGAGTCCATCATATACCAATGATTCAACAGCCAC...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AGTCATGCCATCAATGTTTATCACAGTTTCTTGTGTCAGAGGCTGGCTAACTACGTGGCTGTTGAATCATaGGTATATGATGGACTCCTT +
Preference number: 5 (lower is better)
Translates to: SHAINVYHSFLCQRLANYVAVES*VYDGLL
Trigger: AAGGAGTCCATCATATACCAATGATTCAACAGCCAC...GTAGTTAGCCAGCCTCTGACACAAGAAACTGTGATAAACATTGATGGCATGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACGTGATACAGCCTCTATaGCTTTTCTCAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: IGESEPALDIKVSLLSSDVIQPL*LFSGIL
Trigger: CAGAATCCCTGAGAAAAGCAATAGAGGCTGTATCAC...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ACTGGAAATTTGCCTCCTGGAACTACTTTAATGATATCTCCACGTTGTACAAGTTCCTTCCTCCTTGTCTaGAACTGGTGTCATCCCTTT +
Preference number: 5 (lower is better)
Translates to: TGNLPPGTTLMISPRCTSSFLLV*NWCHPF
Trigger: AAAGGGATGACACCAGTTCAAGACAAGGAGGAAGGA...ACTTGTACAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp GTTTGCAATATTTGGTTATGGCTGTTCCTAGAGGGTGTTCACTGTTACTTTCAGAATTCCGTTCAATGTTaGCTACACAGGAAGCGCAAG +
Preference number: 5 (lower is better)
Translates to: VCNIWLWLFLEGVHCYFQNSVQC*LHRKRK
Trigger: CTTGCGCTTCCTGTGTAGCAAACATTGAACGGAATT...CTGAAAGTAACAGTGAACACCCTCTAGGAACAGCCATAACCAAATATTGCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTGCTATCATTGGGGGTaGTATAACAGCAGGATTATA +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNCYHWG*YNSRII
Trigger: TATAATCCTGCTGTTATACAACCCCCAATGATAGCA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AGGATCCCTCTGTGTTTTGTGAGACTAGACTCTATTTTATGTACGCAGGAGGCATGCTATCATTGGGGGTaGTATAACAGCAGGATTATA +
Preference number: 5 (lower is better)
Translates to: RIPLCFVRLDSILCTQEACYHWG*YNSRII
Trigger: TATAATCCTGCTGTTATACAACCCCCAATGATAGCA...TGCCTCCTGCGTACATAAAATAGAGTCTAGTCTCACAAAACACAGAGGGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp TGGTTCCAGTCTTATCAAATACCACTACCTTTACCTTATGAGCCATCTCCAATGGCTGACCGATCCTTCTaGACCAAAGAAGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: WFQSYQIPLPLPYEPSPMADRSF*TKEASK
Trigger: TTTTGAAGCTTCTTTGGTCAAGAAGGATCGGTCAGC...CATTGGAGATGGCTCATAAGGTAAAGGTAGTGGTATTTGATAAGACTGGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGAATGATATCTCCACGTaGTACAAGTTCCACATCCAC +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRNDIST*YKFHIH
Trigger: GTGGATGTGGAACTTGTACAACGTGGAGATATCATT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTTCATGGAAGACGAAGTaGATGACTGTTCATTACTGG +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTASWKTK*MTVHYW
Trigger: CCAGTAATGAACAGTCATCAACTTCGTCTTCCATGA...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTCTAGCTGTTTTACTGTaGTCTCCAGTCATCAGAACT +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTALAVLL*SPVIRT
Trigger: AGTTCTGATGACTGGAGACAACAGTAAAACAGCTAG...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTGGCAGGGATACAGGCTaGAGAGTATCTTCAATATTT +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTAGRDTG*RVSSIF
Trigger: AAATATTGAAGATACTCTCAAGCCTGTATCCCTGCC...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGACTGCAGAAAGTTGACACACCATACATCTaGAGACTACAATACTACTAC +
Preference number: 5 (lower is better)
Translates to: MLCALSGYSYQMEGLQKVDTPYI*RLQYYY
Trigger: GTAGTAGTATTGTAGTCTCAAGATGTATGGTGTGTC...AACTTTCTGCAGTCCCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTACAAGAACTCATGCTTaGTGCTCTATCTGGTTACTC +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTATRTHA*CSIWLL
Trigger: GAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGT...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACACTAAAAACGTAAGGTaGAGACGCCTGGTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: IGESEPALDIKVSLLSSDTKNVR*RRLVLA
Trigger: AGCCAAAACCAGGCGTCTCAACCTTACGTTTTTAGT...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGTCAGTACGTCCATATTaGCTGTCTTATGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRSVRPY*LSYASV
Trigger: CACTGAAGCATAAGACAGCAAATATGGACGTACTGA...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341514.11
CDS-3UTR CAA 90 bp GTTGCAAAGTGGTGGTCCATAACCATCATATATATCATCAGCCCCATTACAGGATCAGTACGTCCATATTaGCTGTCTTATGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: VAKWWSITIIYIISPITGSVRPY*LSYASV
Trigger: CACTGAAGCATAAGACAGCAAATATGGACGTACTGA...TCCTGTAATGGGGCTGATGATATATATGATGGTTATGGACCACCACTTTGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp GGCCTGGCAGTAAAAATAAACATGTTTAAGGGTAAGCAATTCAGGCTGGGCGTGTGGCTGGCTCAACATTaGAAAATCAATCAGTGTAAT +
Preference number: 5 (lower is better)
Translates to: GLAVKINMFKGKQFRLGVWLAQH*KINQCN
Trigger: ATTACACTGATTGATTTTCAAATGTTGAGCCAGCCA...CACGCCCAGCCTGAATTGCTTACCCTTAAACATGTTTATTTTTACTGCCAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS-3UTR CAA 90 bp AAATTAACTTTGCAAGAGCCTCTGATGTTTTGCCCTTTGCTATATGTTCCAGCCAATTCGCTGAACACCTaGCAGTTTCCCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: KLTLQEPLMFCPLLYVPANSLNT*QFPNFS
Trigger: GGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATT...GGCTGGAACATATAGCAAAGGGCAAAACATCAGAGGCTCTTGCAAAGTTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AGCAAATCGTATTATCGTTTCTGTTCGGGAGATACTTCTATTGTAGCCAGGAAAGTTTATCACAGTTTCTaGTGTCAGAGGCTGGCTAAC +
Preference number: 5 (lower is better)
Translates to: SKSYYRFCSGDTSIVARKVYHSF*CQRLAN
Trigger: GTTAGCCAGCCTCTGACACAAGAAACTGTGATAAAC...TTTCCTGGCTACAATAGAAGTATCTCCCGAACAGAAACGATAATACGATTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTTAATATGTGCTTTGTaGGTTGCCAGGGCCACGGAG +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAILICAL*VARATE
Trigger: CTCCGTGGCCCTGGCAACCAACAAAGCACATATTAA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ACACGTCATTCCCCTCACAACAAGTTCCAAAACACCATCTCCTTCATCAGCATTAAAAGACCGTCTCCATaGTCTTATTTCTCGTTTATG +
Preference number: 5 (lower is better)
Translates to: TRHSPHNKFQNTISFISIKRPSP*SYFSFM
Trigger: CATAAACGAGAAATAAGACAATGGAGACGGTCTTTT...AATGCTGATGAAGGAGATGGTGTTTTGGAACTTGTTGTGAGGGGAATGACGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAGAGCCTCTGATGTTTaGCCCTGTACAGGTACACAC +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIARASDV*PCTGTH
Trigger: GTGTGTACCTGTACAGGGCAAAACATCAGAGGCTCT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343533.9
CDS-3UTR CAA 90 bp GAGGATCATACTCAACAGTCCCATTGCTATTTGCAAGGGAGACTCGTATGGATTGTAGTGAAATTAACTTaGCAAGAGCCTCTGATGTTT +
Preference number: 5 (lower is better)
Translates to: EDHTQQSHCYLQGRLVWIVVKLT*QEPLMF
Trigger: AAACATCAGAGGCTCTTGCAAAGTTAATTTCACTAC...AATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTATGATCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACCACAAGTTTGACAATTaGAGAAAGGGTTGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: IGESEPALDIKVSLLSSDHKFDN*RKGCVC
Trigger: GCAGACACAACCCTTTCTCAAATTGTCAAACTTGTG...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ACACGTCATTCCCCTCACAACAAGTTCCAAAACACCATCTCCTTCATCAGCATTAACTGTGATAGAGGCTaGGAAAGCAAATCGTATTAT +
Preference number: 5 (lower is better)
Translates to: TRHSPHNKFQNTISFISINCDRG*ESKSYY
Trigger: ATAATACGATTTGCTTTCCAAGCCTCTATCACAGTT...AATGCTGATGAAGGAGATGGTGTTTTGGAACTTGTTGTGAGGGGAATGACGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp TTAGCAGCAGTTCAGCAATCTCTAATTGTAGGGCTTGTTGTAAACCTCACTGCTTCCTGTTTGCAATATTaGGTTATGGCTGTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: LAAVQQSLIVGLVVNLTASCLQY*VMAVPR
Trigger: TCTAGGAACAGCCATAACCAAATATTGCAAACAGGA...AGCAGTGAGGTTTACAACAAGCCCTACAATTAGAGATTGCTGAACTGCTGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATGACAAGACCATTTCTAATCATCCACTCCCGGTTACCAATGAGGACTTTATACCTAGCTGTTTTACTGTaGTCTCCAGTCATCAGAACT +
Preference number: 5 (lower is better)
Translates to: MTRPFLIIHSRLPMRTLYLAVLL*SPVIRT
Trigger: AGTTCTGATGACTGGAGACAACAGTAAAACAGCTAG...GTATAAAGTCCTCATTGGTAACCGGGAGTGGATGATTAGAAATGGTCTTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACCGTTTCCCCTCCTCTaGAAGTTGCTTCACTTTAGC +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRPFPLL*KLLHFS
Trigger: GCTAAAGTGAAGCAACTTCAAGAGGAGGGGAAACGG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGCCGTTTCCCCTCCTCTaGAAGTTGCTTCACTTTAGC +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLPFPLL*KLLHFS
Trigger: GCTAAAGTGAAGCAACTTCAAGAGGAGGGGAAACGG...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGATGGGAGGCAGGGAACCCTACAGACCTTTAAGGTCTTTTGAGCTACAAAATTTGATAAGTCAATACTaGCCACTACATCCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: KMGGREPYRPLRSFELQNLISQY*PLHPED
Trigger: ATCTTCTGGATGTAGTGGCAAGTATTGACTTATCAA...ATTTTGTAGCTCAAAAGACCTTAAAGGTCTGTAGGGTTCCCTGCCTCCCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGACCAGGAGTGAGTGCTaGTCAGGTTCACTGGTAACA +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLTRSEC*SGSLVT
Trigger: TGTTACCAGTGAACCTGACAAGCACTCACTCCTGGT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAGGGTTAGCAGCAGCTTaGCTTCTGGTAATGGGAACA +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRGLAAA*LLVMGT
Trigger: TGTTCCCATTACCAGAAGCAAAGCTGCTGCTAACCC...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTGGGTTAGCAGCAGCTTaGCTTCTGGTAATGGGAACA +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIGLAAA*LLVMGT
Trigger: TGTTCCCATTACCAGAAGCAAAGCTGCTGCTAACCC...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGCTGAAAGCAGTATTTTaGATTCCCTCCATAATCACC +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRLKAVF*IPSIIT
Trigger: GGTGATTATGGAGGGAATCAAAAATACTGCTTTCAG...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ACTGGAAATTTGCCTCCTGGAACTACTTTAATGATATCTCCACGTTGTACAAGTCTGATGTTTTGCCCTTaGCTATATGTTCCAGCCATC +
Preference number: 5 (lower is better)
Translates to: TGNLPPGTTLMISPRCTSLMFCP*LYVPAI
Trigger: GATGGCTGGAACATATAGCAAAGGGCAAAACATCAG...ACTTGTACAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACACGACTTCACCAGCTaGAGCCATACTATGATCTTC +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRHDFTS*SHTMIF
Trigger: GAAGATCATAGTATGGCTCAAGCTGGTGAAGTCGTG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATACTTGGGCTGCTTTTaGACAAATGCTGGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAYLGCF*TNAGKP
Trigger: GGGCTTTCCAGCATTTGTCAAAAAGCAGCCCAAGTA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTCCTTCCTCCTTGTCTaGAACTGGTGTCATCCCTTT +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAISFLLV*NWCHPF
Trigger: AAAGGGATGACACCAGTTCAAGACAAGGAGGAAGGA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGGTAGTGAAATTAACTTaGCAAGAGCCTCTGATGTTT +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRVVKLT*QEPLMF
Trigger: AAACATCAGAGGCTCTTGCAAAGTTAATTTCACTAC...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp ATAGGTGAGTCTGAACCGGCACTGGATATTAAAGTATCCTTGTTATCTTCAGACTCCTGTTTGCAATATTaGGTTATGGCTGTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: IGESEPALDIKVSLLSSDSCLQY*VMAVPR
Trigger: TCTAGGAACAGCCATAACCAAATATTGCAAACAGGA...GTCTGAAGATAACAAGGATACTTTAATATCCAGTGCCGGTTCAGACTCACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAATTAACTTTGCAAGAGCCTCTGATGTTTTGCCCTTTGCTATATGTTCCAGCCTCCTGTTTGCAATATTaGGTTATGGCTGTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: KLTLQEPLMFCPLLYVPASCLQY*VMAVPR
Trigger: TCTAGGAACAGCCATAACCAAATATTGCAAACAGGA...GGCTGGAACATATAGCAAAGGGCAAAACATCAGAGGCTCTTGCAAAGTTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp AAGGTTTCAGTGTCCAGCTCCTGTTTGCAATATTTGGTTATGGCTGTTCCTAGAATTACTGGCATCAATTaGAACCAGGGATGCATTTTT +
Preference number: 5 (lower is better)
Translates to: KVSVSSSCLQYLVMAVPRITGIN*NQGCIF
Trigger: AAAAATGCATCCCTGGTTCAAATTGATGCCAGTAAT...TCTAGGAACAGCCATAACCAAATATTGCAAACAGGAGCTGGACACTGAAACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACCCCTCCTCTTGAAGTaGCTTCACTTTAGCAACCTT +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRPLLLK*LHFSNL
Trigger: AAGGTTGCTAAAGTGAAGCAACTTCAAGAGGAGGGG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AAGAACAAGAACTCATGCTTTGTGCTCTATCTGGTTACTCATACCAGATGGAGGACTATAATTATAAAGTaGAAGGCACATCCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: KNKNSCFVLYLVTHTRWRTIIIK*KAHPWQ
Trigger: CTGCCAAGGATGTGCCTTCAACTTTATAATTATAGT...CCTCCATCTGGTATGAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp AGTCATGCCATCAATGTTTATCACAGTTTCTTGTGTCAGAGGCTGGCTAACTACTGGCTGGCTCAACATTaGAAAATCAATCAGTGTAAT +
Preference number: 5 (lower is better)
Translates to: SHAINVYHSFLCQRLANYWLAQH*KINQCN
Trigger: ATTACACTGATTGATTTTCAAATGTTGAGCCAGCCA...GTAGTTAGCCAGCCTCTGACACAAGAAACTGTGATAAACATTGATGGCATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645094.1
CDS CCA 90 bp AGTCATACCCTCAACAGAAATGGTAACAGAATTCACACCCATACTTaGATCCATTTTGATTTCCTCATTACATTCCTGGTTTCTCTATCC +
Preference number: 5 (lower is better)
Translates to: SHTLNRNGNRIHTHT*IHFDFLITFLVSLS
Trigger: GGATAGAGAAACCAGGAATGTAATGAGGAAATCAAAATGGATCCAAGTATGGGTGTGAATTCTGTTACCATTTCTGTTGAGGGTATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000645094.1
ENST00000682742.1
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATCAATAGCTCCCAATTaGAGGTACTTGGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIASIAPN*RYLGCF
Trigger: AAAGCAGCCCAAGTACCTCAAATTGGGAGCTATTGA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTGTTTATCACAGTTTCTaGTGTCAGAGGCTGGCTAAC +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIVYHSF*CQRLAN
Trigger: GTTAGCCAGCCTCTGACACAAGAAACTGTGATAAAC...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATACTCAACAGTCCCATaGCTATTTGCAAGGGAGACT +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRYSTVP*LFARET
Trigger: AGTCTCCCTTGCAAATAGCAATGGGACTGTTGAGTA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTATCCCATGTCTTCTATaGCTCCTCTCAACGTTTCTG +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIIPCLL*LLSTFL
Trigger: CAGAAACGTTGAGAGGAGCAATAGAAGACATGGGAT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTAATTCCGTTCAATGTTaGCTACACAGGAAGCGCAAG +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAINSVQC*LHRKRK
Trigger: CTTGCGCTTCCTGTGTAGCAAACATTGAACGGAATT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATATTTAATATGTGCTTaGTTGGTTGCCAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRYLICA*LVARAT
Trigger: CGTGGCCCTGGCAACCAACAAAGCACATATTAAATA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTATTTAATATGTGCTTaGTTGGTTGCCAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIYLICA*LVARAT
Trigger: CGTGGCCCTGGCAACCAACAAAGCACATATTAAATA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTGCTGACCGATCCTTCTaGACCAAAGAAGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIADRSF*TKEASK
Trigger: TTTTGAAGCTTCTTTGGTCAAGAAGGATCGGTCAGC...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCACCATCCACTGGAAATTaGCCTCCTGGAACTACTTTA +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAPSTGN*PPGTTL
Trigger: TAAAGTAGTTCCAGGAGGCAAATTTCCAGTGGATGG...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGACAATTTGAGAAAGGGTaGTGTCTGCTCCAACATGTG +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRQFEKG*CLLQHV
Trigger: CACATGTTGGAGCAGACACAACCCTTTCTCAAATTG...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGGTGTCCAGCTCCTGTTaGCAATATTTGGTTATGGCT +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLVSSSC*QYLVMA
Trigger: AGCCATAACCAAATATTGCAAACAGGAGCTGGACAC...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTGTGTCCAGCTCCTGTTaGCAATATTTGGTTATGGCT +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIVSSSC*QYLVMA
Trigger: AGCCATAACCAAATATTGCAAACAGGAGCTGGACAC...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGTTGAGACGCCTGGTTTaGGCTACAAAAGGCATTTGT +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLLRRLV*ATKGIC
Trigger: ACAAATGCCTTTTGTAGCCAAAACCAGGCGTCTCAA...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAACTAAAAACGTAAGGTaGAGACGCCTGGTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIATKNVR*RRLVLA
Trigger: AGCCAAAACCAGGCGTCTCAACCTTACGTTTTTAGT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATACAGTAGATGGATATaGCACAACATCGTCCACTGC +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAYSRWI*HNIVHC
Trigger: GCAGTGGACGATGTTGTGCAATATCCATCTACTGTA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGTACAGTAGATGGATATaGCACAACATCGTCCACTGC +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLYSRWI*HNIVHC
Trigger: GCAGTGGACGATGTTGTGCAATATCCATCTACTGTA...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCCCAATTTGAGGTACTaGGGCTGCTTTTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAIPNLRY*GCFLTN
Trigger: ATTTGTCAAAAAGCAGCCCAAGTACCTCAAATTGGG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAAATGATATCTCCACGTaGTACAAGTTCCACATCCAC +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRNDIST*YKFHIH
Trigger: GTGGATGTGGAACTTGTACAACGTGGAGATATCATT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCACACAAGTTTGACAATTaGAGAAAGGGTTGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAHKFDN*RKGCVC
Trigger: GCAGACACAACCCTTTCTCAAATTGTCAAACTTGTG...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGATTTATACACAGTGCTTaGAAAGTCATTGCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRFIHSA*KVIAPQ
Trigger: CTGGGGAGCAATGACTTTCAAAGCACTGTGTATAAA...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAACAAGCTCCTAAATTaGCCAACCACACTAACTAGG +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIANKLLN*PTTLTR
Trigger: CCTAGTTAGTGTGGTTGGCAAATTTAGGAGCTTGTT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTAACAAGCTCCTAAATTaGCCAACCACACTAACTAGG +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAINKLLN*PTTLTR
Trigger: CCTAGTTAGTGTGGTTGGCAAATTTAGGAGCTTGTT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGACAAGAACTCATGCTTaGTGCTCTATCTGGTTACTC +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLTRTHA*CSIWLL
Trigger: GAGTAACCAGATAGAGCACAAAGCATGAGTTCTTGT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS TCA 90 bp GCCAATAAAGGTGAAACTCTGGTAACATTCTCTCTTATTCAAAGCTaGATCACTGTCAGGACAGATAAGGATGAAAAATTATGTACTGGA +
Preference number: 5 (lower is better)
Translates to: ANKGETLVTFSLIQS*ITVRTDKDEKLCTG
Trigger: TCCAGTACATAATTTTTCATCCTTATCTGTCCTGACAGTGATTCAGCTTTGAATAAGAGAGAATGTTACCAGAGTTTCACCTTTATTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642523.1
CDS CCA 90 bp AGTCATACCCTCAACAGAAATGGTAACAGAATTCACACCCATACTTaGATCCATTTTGATTTCCTCATTACATTCTGTTGTATACCTTCA +
Preference number: 5 (lower is better)
Translates to: SHTLNRNGNRIHTHT*IHFDFLITFCCIPS
Trigger: TGAAGGTATACAACAGAATGTAATGAGGAAATCAAAATGGATCCAAGTATGGGTGTGAATTCTGTTACCATTTCTGTTGAGGGTATGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642651.1
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTGCTATCATTGGGGGTaGTATAACAGCAGGATTATA +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAICYHWG*YNSRII
Trigger: TATAATCCTGCTGTTATACAACCCCCAATGATAGCA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTCTGAAAGCAGTATTTTaGATTCCCTCCATAATCACC +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAILKAVF*IPSIIT
Trigger: GGTGATTATGGAGGGAATCAAAAATACTGCTTTCAG...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGGACACACCATACATCTaGAGACTACAATACTACTAC +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLDTPYI*RLQYYY
Trigger: GTAGTAGTATTGTAGTCTCAAGATGTATGGTGTGTC...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTTGCGCACTTAAAGTTTaGGAAACATCTTGTCTACAG +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAICALKV*ETSCLQ
Trigger: CTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCA...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAAAAAGACCGTCTCCATaGTCTTATTTCTCGTTTATG +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAKRPSP*SYFSFM
Trigger: CATAAACGAGAAATAAGACAATGGAGACGGTCTTTT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGAAAAGACCGTCTCCATaGTCTTATTTCTCGTTTATG +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLKRPSP*SYFSFM
Trigger: CATAAACGAGAAATAAGACAATGGAGACGGTCTTTT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGGTAGTGAAATTAACTTaGCAAGAGCCTCTGATGTTT +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLVVKLT*QEPLMF
Trigger: AAACATCAGAGGCTCTTGCAAAGTTAATTTCACTAC...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TCATACCAGATGGAGGGACTGCAGAAAGTTAGTGTAAAAATAGGTAATAATTTGAACTGTGATAGAGGCTaGGAAAGCAAATCGTATTAT +
Preference number: 5 (lower is better)
Translates to: SYQMEGLQKVSVKIGNNLNCDRG*ESKSYY
Trigger: ATAATACGATTTGCTTTCCAAGCCTCTATCACAGTT...CAAATTATTACCTATTTTTACACTAACTTTCTGCAGTCCCTCCATCTGGTATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp CAGAAAAGATATGCGCACTTAAAGTTTTGGAAACATCTTGTCTACAGTGCTATTAACTGTGATAGAGGCTaGGAAAGCAAATCGTATTAT +
Preference number: 5 (lower is better)
Translates to: QKRYAHLKFWKHLVYSAINCDRG*ESKSYY
Trigger: ATAATACGATTTGCTTTCCAAGCCTCTATCACAGTT...AATAGCACTGTAGACAAGATGTTTCCAAAACTTTAAGTGCGCATATCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCAATTACTGGCATCAATTaGAACCAGGGATGCATTTTT +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIAITGIN*NQGCIF
Trigger: AAAAATGCATCCCTGGTTCAAATTGATGCCAGTAAT...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TTATTTCAATACTACAAGCTGCTATTCCCACTGTCCCACAATATGAATACAAGAATTACTGGCATCAATTaGAACCAGGGATGCATTTTT +
Preference number: 5 (lower is better)
Translates to: LFQYYKLLFPLSHNMNTRITGIN*NQGCIF
Trigger: AAAAATGCATCCCTGGTTCAAATTGATGCCAGTAAT...TCTTGTATTCATATTGTGGGACAGTGGGAATAGCAGCTTGTAGTATTGAAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATTGATAAGTCAATACTaGCCACTACATCCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIALISQY*PLHPED
Trigger: ATCTTCTGGATGTAGTGGCAAGTATTGACTTATCAA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS-3UTR CAA 90 bp TGCAAACCCATTGATATTTCAGTGAAATGGGTTTGCCTTTCTAGATTAATAGCATCTAGAAGAAACAAGTaGTATTATAAGATGGGCCAC +
Preference number: 5 (lower is better)
Translates to: CKPIDISVKWVCLSRLIASRRNK*YYKMGH
Trigger: GTGGCCCATCTTATAATACAACTTGTTTCTTCTAGA...TGCTATTAATCTAGAAAGGCAAACCCATTTCACTGAAATATCAATGGGTTTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341514.11
ENST00000343533.9
CDS GCA 72 bp AGCTCACACAATCGGAGAAGTCACAGTAGCTGCGGCTaGGGCGGCGGCAGCAACAACTCCTCCCTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SSHNRRSHSSCG*GGGSNNSSLCF
Trigger: GAAGCAGAGGGAGGAGTTGTTGCTGCCGCCGCCGCAGCCGCAGCTACTGTGACTTCTCCGATTGTGTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343533.9
ENST00000682742.1
CDS CAA 72 bp ATTCCCACATTAGCCATTGCCAGAGCTGGGGAGTCATaGATTCCATCTCCCACCATTGCTACCCGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: IPTLAIARAGES*IPSPTIATRFP
Trigger: GGGGAAACGGGTAGCAATGGTGGGAGATGGAATCAATGACTCCCCAGCTCTGGCAATGGCTAATGTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS CCA 72 bp TCCTCATCTGGTTTCTCTATCCTATGGTTAAACCTCTaGAGCTACGCAGACCGTGGCAGCGATAAATCCACG +
Preference number: 6 (lower is better)
Translates to: SSSGFSILWLNL*SYADRGSDKST
Trigger: CGTGGATTTATCGCTGCCACGGTCTGCGTAGCTCCAGAGGTTTAACCATAGGATAGAGAAACCAGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642523.1
ENST00000642651.1
ENST00000645454.1
CDS CAA 72 bp TCCATCTCCCACCATTGCTACCCGTTTCCCCTCCTCTaGAAGTTGCTTCACTTTAGCAACCTTGTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: SISHHCYPFPLL*KLLHFSNLVRR
Trigger: CCTTCTCACAAGGTTGCTAAAGTGAAGCAACTTCAAGAGGAGGGGAAACGGGTAGCAATGGTGGGAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS CAA 72 bp TCATCTTCCCTGAAGTCTCCCACCAGGAGTGAGTGCTaGTCAGGTTCACTGGTAACAACACTGTTTAGGGAG +
Preference number: 6 (lower is better)
Translates to: SSSLKSPTRSEC*SGSLVTTLFRE
Trigger: CTCCCTAAACAGTGTTGTTACCAGTGAACCTGACAAGCACTCACTCCTGGTGGGAGACTTCAGGGAAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS CAA 90 bp GCAGTGTCATCATCTTCCCTGAAGTCTCCCACCAGGAGTGAGTGCTaGTCAGGTTCACTGGTAACAACACTGTTTAGGGAGCGTTTATCA +
Preference number: 6 (lower is better)
Translates to: AVSSSSLKSPTRSEC*SGSLVTTLFRERLS
Trigger: TGATAAACGCTCCCTAAACAGTGTTGTTACCAGTGAACCTGACAAGCACTCACTCCTGGTGGGAGACTTCAGGGAAGATGATGACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS TCA 72 bp AGTGTCATCATCTTCCCTGAAGTCTCCCACCAGGAGTaGGTGCTTGTCAGGTTCACTGGTAACAACACTGTT +
Preference number: 6 (lower is better)
Translates to: SVIIFPEVSHQE*VLVRFTGNNTV
Trigger: AACAGTGTTGTTACCAGTGAACCTGACAAGCACTCACTCCTGGTGGGAGACTTCAGGGAAGATGATGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS TCA 72 bp CCATGGCCTTTTATAATGCAGTGTCATCATCTTCCCTaGAGTCTCCCACCAGGAGTGAGTGCTTGTCAGGTT +
Preference number: 6 (lower is better)
Translates to: PWPFIMQCHHLP*SLPPGVSACQV
Trigger: AACCTGACAAGCACTCACTCCTGGTGGGAGACTTCAGGGAAGATGATGACACTGCATTATAAAAGGCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS CCA 72 bp TACATTCCTGGTTTCTCTATCCTATGGTTAAACCTCTaGAGCTACGCAGACCGTGGCAGCGATAAATCCACG +
Preference number: 6 (lower is better)
Translates to: YIPGFSILWLNL*SYADRGSDKST
Trigger: CGTGGATTTATCGCTGCCACGGTCTGCGTAGCTCCAGAGGTTTAACCATAGGATAGAGAAACCAGGAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000645094.1
ENST00000682742.1
CDS CCA 72 bp CTGGGCGACAGAGTGAGATTCCATCCTGGGAATGCATaGCTGGCTCAACATTTGAAAATCAATCAGTGTAAT +
Preference number: 6 (lower is better)
Translates to: LGDRVRFHPGNA*LAQHLKINQCN
Trigger: ATTACACTGATTGATTTTCAAATGTTGAGCCAGCCATGCATTCCCAGGATGGAATCTCACTCTGTCGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642651.1
ENST00000645454.1
CDS CAA 72 bp AGGGAAGATGCTGAAGAAGGGTCTTCAGCAAATTGTTaGGTCTCTTCTGATGCTCAGTTTCCTCATCTGGTT +
Preference number: 6 (lower is better)
Translates to: REDAEEGSSANC*VSSDAQFPHLV
Trigger: AACCAGATGAGGAAACTGAGCATCAGAAGAGACCAAACAATTTGCTGAAGACCCTTCTTCAGCATCTTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS TCA 72 bp AATCCGGTCCAGCAAACCCAGTTTAGGAGAATTCCTTaGGGTATCATCTATTCCAACATGAACGCTGATTTC +
Preference number: 6 (lower is better)
Translates to: NPVQQTQFRRIP*GIIYSNMNADF
Trigger: GAAATCAGCGTTCATGTTGGAATAGATGATACCTCAAGGAATTCTCCTAAACTGGGTTTGCTGGACCGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS CCA 72 bp ATCATGAATGCTGTGTCAGTGCATGACAAGTTAAACTaGCAGCACTCTCCATGGCCTTTTATAATGCAGTGT +
Preference number: 6 (lower is better)
Translates to: IMNAVSVHDKLN*QHSPWPFIMQC
Trigger: ACACTGCATTATAAAAGGCCATGGAGAGTGCTGCCAGTTTAACTTGTCATGCACTGACACAGCATTCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000682475.1
CDS CCA 72 bp ATTGTTTGGTCTCTTCTGATGCTCAGTTTCCTCATCTaGTTTCTCTATCCTATGGTTAAACCTCTGGAGCTA +
Preference number: 6 (lower is better)
Translates to: IVWSLLMLSFLI*FLYPMVKPLEL
Trigger: TAGCTCCAGAGGTTTAACCATAGGATAGAGAAACCAGATGAGGAAACTGAGCATCAGAAGAGACCAAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642523.1
ENST00000642651.1
ENST00000645454.1
CDS CAA 72 bp ATGGTAACAGAATTCACACCCATACTTGGATCCATTTaGATTTCCTCATTACATTCATTTGACGGCAAGCTC +
Preference number: 6 (lower is better)
Translates to: MVTEFTPILGSI*ISSLHSFDGKL
Trigger: GAGCTTGCCGTCAAATGAATGTAATGAGGAAATCAAAATGGATCCAAGTATGGGTGTGAATTCTGTTACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645454.1
CDS CCA 72 bp CTCAACAGAAATGGTAACAGAATTCACACCCATACTTaGATCCATTTTGATTTCCTCATTACATTCCTGGTT +
Preference number: 6 (lower is better)
Translates to: LNRNGNRIHTHT*IHFDFLITFLV
Trigger: AACCAGGAATGTAATGAGGAAATCAAAATGGATCCAAGTATGGGTGTGAATTCTGTTACCATTTCTGTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000645094.1
ENST00000682742.1
CDS CAA 72 bp ATGGTAACAGAATTCACACCCATACTTGGATCCATTTaGATTTCCTCATTACATTCCTGGTTTCTCTATCCT +
Preference number: 6 (lower is better)
Translates to: MVTEFTPILGSI*ISSLHSWFLYP
Trigger: AGGATAGAGAAACCAGGAATGTAATGAGGAAATCAAAATGGATCCAAGTATGGGTGTGAATTCTGTTACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341514.11
ENST00000343533.9
ENST00000645094.1
ENST00000682742.1
CDS CCA 72 bp CTCAACAGAAATGGTAACAGAATTCACACCCATACTTaGATCCATTTTGATTTCCTCATTACATTCTGTTGT +
Preference number: 6 (lower is better)
Translates to: LNRNGNRIHTHT*IHFDFLITFCC
Trigger: ACAACAGAATGTAATGAGGAAATCAAAATGGATCCAAGTATGGGTGTGAATTCTGTTACCATTTCTGTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642651.1
CDS CAA 72 bp ATGGTAACAGAATTCACACCCATACTTGGATCCATTTaGATTTCCTCATTACATTCTGTTGTATACCTTCAG +
Preference number: 6 (lower is better)
Translates to: MVTEFTPILGSI*ISSLHSVVYLQ
Trigger: CTGAAGGTATACAACAGAATGTAATGAGGAAATCAAAATGGATCCAAGTATGGGTGTGAATTCTGTTACCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642651.1