RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP6V1H (Homo sapiens)

Ensembl gene IDs: ENSG00000047249

Ensembl transcript IDs: ENST00000355221.7, ENST00000359530.7, ENST00000396774.6, ENST00000518072.1, ENST00000519588.1, ENST00000520188.5, ENST00000521275.5, ENST00000521335.1, ENST00000521707.1, ENST00000521900.5, ENST00000522159.5, ENST00000522849.1, ENST00000523343.1, ENST00000523899.5, ENST00000524164.5, ENST00000524234.1

Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTaGCCCGGAGCATCAGCTGCAAACACCCGGCCACGCACTGCACAT +
Preference number: 1 (lower is better)
Translates to: CNLPHLLPPKQSGTH*PGASAANTRPRTAH
Trigger: ATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
3UTR GCA 90 bp GCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTaGAAACACCCGGCCACGCACTGCACATACTGCGAACTATCACTT +
Preference number: 1 (lower is better)
Translates to: ASTQAKRYSLTRSIS*KHPATHCTYCELSL
Trigger: AAGTGATAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR CCA 90 bp TCTTGCTGCCATATGAACAGTGAAGGGATCCTGGCGATTCAACATTaGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATA +
Preference number: 1 (lower is better)
Translates to: SCCHMNSEGILAIQH*QKVGPRSVLATSCI
Trigger: TATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGGATCCCTTCACTGTTCATATGGCAGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
3UTR GCA 90 bp CAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTaGATAGTCAAAGAAAATGCTAACACGCTGATGATTTTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: QHWQKVGPRSVLATS*IVKENANTLMIFLQ
Trigger: CTGCAGGAAAATCATCAGCGTGTTAGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
3UTR GCA 90 bp TCATTTAACCTCACAGCATTCTCTCTCCAAAATTTCTCAGATTTGTaGACAGGACTCCATTCCAACCTTCCAGATTTAAGTTCTGAACTG +
Preference number: 1 (lower is better)
Translates to: SFNLTAFSLQNFSDL*TGLHSNLPDLSSEL
Trigger: CAGTTCAGAACTTAAATCTGGAAGGTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTGGAGAGAGAATGCTGTGAGGTTAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR TCA 90 bp GCAGGCTTAGCTTCGGGCGGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTGCTTCCCAGTTGTGCACCATaGGCTTCTGCACGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: AGLASGGSGLGLLGLELLPSCAP*ASARPA
Trigger: TGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGG...AAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCGAAGCTAAGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR GCA 90 bp GCAGGCTTAGCTTCGGGCGGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTGCTTTGGTTCATGACCAGCTaGTTCCCACCGAGCTGCTCG +
Preference number: 2 (lower is better)
Translates to: AGLASGGSGLGLLGLELLWFMTS*FPPSCS
Trigger: CGAGCAGCTCGGTGGGAAGCAGCTGGTCATGAACCA...AAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCGAAGCTAAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR TCA 90 bp AGAGGCAGGCTTAGCTTCGGGCGGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTCAAAGCGGTACTCATTaGCCCGGAGCATCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: RGRLSFGRQRSGAARTGAQSGTH*PGASAA
Trigger: TGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTG...AGCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCGAAGCTAAGCCTGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR CAA 90 bp ATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGCAAACACCCGGCCACGCACTGCACA +
Preference number: 2 (lower is better)
Translates to: MQFTPSASTQAKRYS*TRSISCKHPATHCT
Trigger: TGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
3UTR-3UTR GCA 90 bp GGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTGCTTGCCAAGGTATTCCCAGTTACGCACTGCACATACTaGGAACTATCACTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: GSGLGLLGLELLAKVFPVTHCTY*ELSLEE
Trigger: CTCTTCAAGTGATAGTTCGCAGTATGTGCAGTGCGT...AACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR CCA 90 bp TCTGGGGCTGCTCGGACTGGAGCTGCTTGCCAAGGTATTCCCAGTTGTGCACCAGCAACAGCTAAGACTTaGGGATCATCTGACACTTCC +
Preference number: 2 (lower is better)
Translates to: SGAARTGAACQGIPSCAPATAKT*GSSDTS
Trigger: GGAAGTGTCAGATGATCCCCAAGTCTTAGCTGTTGC...TGGTGCACAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR TCA 90 bp TGGGGCTGCTCGGACTGGAGCTGCTTGCCAAGGTATTCCCAGTTGTGCACCATGTCTTTGACAGACTCCTaGAGGATATCAGACAGAACT +
Preference number: 2 (lower is better)
Translates to: WGCSDWSCLPRYSQLCTMSLTDS*RISDRT
Trigger: AGTTCTGTCTGATATCCTTCAGGAGTCTGTCAAAGA...CATGGTGCACAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR GCA 90 bp CCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGGCCACGCAGTGTTCTTaGTACATCTTGCATAGTCAA +
Preference number: 2 (lower is better)
Translates to: PICFHPSKAVLIDPEHQLATQCS*YILHSQ
Trigger: TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGC...CAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR GCA 90 bp TGCCTCGTGGATAATGCCGCACATATTCTCCAACATCGTGAGCAGCAACAGCTACACCCGGCCACGCACTaGACATACTGCGAACTATCA +
Preference number: 2 (lower is better)
Translates to: CLVDNAAHILQHREQQQLHPATH*TYCELS
Trigger: TGATAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTG...TAGCTGTTGCTGCTCACGATGTTGGAGAATATGTGCGGCATTATCCACGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR TCA 90 bp CTCTCTCCAAAATTTCTCAGATTTGTGCACAGGACTCCATTCCAACCTTCCAGACTACTGGTTCTGCATTaGGGCGGAGGGGAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LSPKFLRFVHRTPFQPSRLLVLH*GGGEGQ
Trigger: CTGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAG...TCTGGAAGGTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTGGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR TCA 90 bp CTTGCCAAGGTATTCCCAGTTGTGCACCATGAGCTTCTGCACGGCCAGCAGAGCACCACGCAGTTTCTGTaGACTCAGCTGAGTTTTTAT +
Preference number: 2 (lower is better)
Translates to: LAKVFPVVHHELLHGQQSTTQFL*TQLSFY
Trigger: ATAAAAACTCAGCTGAGTTCACAGAAACTGCGTGGT...GCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTTGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR TCA 90 bp CACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGCAAACACCCGGCTGCCAGGAGCCATATTaGAAAAATCATTTGATACTG +
Preference number: 2 (lower is better)
Translates to: HPSKAVLIDPEHQLQTPGCQEPY*KNHLIL
Trigger: CAGTATCAAATGATTTTTTCAATATGGCTCCTGGCA...GCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
3UTR-3UTR GCA 90 bp CTTGCCAAGGTATTCCCAGTTGTGCACCATGAGCTTCTGCACGGCCAGCAGAGCGAACGGTCTGTTCTTTaGAGATATGAGTCATCAGAT +
Preference number: 2 (lower is better)
Translates to: LAKVFPVVHHELLHGQQSERSVL*RYESSD
Trigger: ATCTGATGACTCATATCTGCAAAGAACAGACCGTTC...GCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTTGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR CCA 90 bp CTGGAGCTGAAAGCCACACTTGTTACTCAACACTCCCATTATGCAATTTACCCCCAGTGCTCCCACTACTaGTTCTGCATTGAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: LELKATLVTQHSHYAIYPQCSHY*FCIEAE
Trigger: CTCCGCCTCAATGCAGAACCAGTAGTGGGAGCACTG...GGGGTAAATTGCATAATGGGAGTGTTGAGTAACAAGTGTGGCTTTCAGCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR CCA 90 bp AAGGTATTCCCAGTTGTGCACCATGAGCTTCTGCACGGCCAGCAGAGCATTATAGACCCGTTTGCCTCGTaGATAATGCCGCACATATTC +
Preference number: 2 (lower is better)
Translates to: KVFPVVHHELLHGQQSIIDPFAS*IMPHIF
Trigger: GAATATGTGCGGCATTATCCACGAGGCAAACGGGTC...TATAATGCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR GCA 90 bp ACTGGAGCTGAAAGCCACACTTGTTACTCAACACTCCCATTATGCAATTTACCCTCCCACTACTGGTTCTaGATTGAGGCGGAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: TGAESHTCYSTLPLCNLPSHYWF*IEAEGK
Trigger: CTTCCCCTCCGCCTCAATGCAGAACCAGTAGTGGGA...GGGTAAATTGCATAATGGGAGTGTTGAGTAACAAGTGTGGCTTTCAGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR GCA 90 bp TGCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGCAAACATCAACACTCCCATTATaGAATTTACCCCATCTGCTT +
Preference number: 2 (lower is better)
Translates to: CFHPSKAVLIDPEHQLQTSTLPL*NLPHLL
Trigger: AAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGA...TGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
3UTR-3UTR TCA 90 bp TTGATATCTTCGCTGATATCTTCATCATCGTACTTCTGCTGTTCCAAGTTCTCCAGGTGTTCACACATTTaGGGACTGAATGCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LISSLISSSSYFCCSKFSRCSHI*GLNARS
Trigger: GCTCCTGGCATTCAGTCCTCAAATGTGTGAACACCT...GGAGAACTTGGAACAGCAGAAGTACGATGATGAAGATATCAGCGAAGATATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR TCA 90 bp CATATGAACAGTGAAGGGATCCTGGCGATTCAACATTGGCAGAAAGTAGGGCCAATAGTTAGTATATACTaGACGGTCTGTTCTTTGCAG +
Preference number: 2 (lower is better)
Translates to: HMNSEGILAIQHWQKVGPIVSIY*TVCSLQ
Trigger: CTGCAAAGAACAGACCGTTCAGTATATACTAACTAT...TGGCCCTACTTTCTGCCAATGTTGAATCGCCAGGATCCCTTCACTGTTCATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
3UTR-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAATCCCACTACTGGTTCTaGATTGAGGCGGAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: FAIHYFATILPIWFEKRQSHYWF*IEAEGK
Trigger: CTTCCCCTCCGCCTCAATGCAGAACCAGTAGTGGGA...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
3UTR-3UTR GCA 90 bp GATTCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATGAACGGTCTGTTCTTTaGAGATATGAGTCATCAGAT +
Preference number: 2 (lower is better)
Translates to: DSTLAESRATQCSCYILHERSVL*RYESSD
Trigger: ATCTGATGACTCATATCTGCAAAGAACAGACCGTTC...ATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
3UTR-3UTR CCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAACAGTGCTCCCACTACTaGTTCTGCATTGAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: FAIHYFATILPIWFEKRQQCSHY*FCIEAE
Trigger: CTCCGCCTCAATGCAGAACCAGTAGTGGGAGCACTG...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
3UTR-3UTR TCA 90 bp TCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTATAGTTAGTATATACTaGACGGTCTGTTCTTTGCAG +
Preference number: 2 (lower is better)
Translates to: SHYAIYPICFHPSKAVLIIVSIY*TVCSLQ
Trigger: CTGCAAAGAACAGACCGTTCAGTATATACTAACTAT...AATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR CAA 90 bp GAACTAAGGTCCTGGACACTCTCTCCAAGTTTTTCCAAAAGAAATTaGATATCTTCGCTGATATCTTCATCATCGTACTTCTGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: ELRSWTLSPSFSKRN*ISSLISSSSYFCCS
Trigger: GGAACAGCAGAAGTACGATGATGAAGATATCAGCGAAGATATCAAATTTCTTTTGGAAAAACTTGGAGAGAGTGTCCAGGACCTTAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR CAA 90 bp TTCTCATTTAACCTCACAGCATTCTCTCTCCAAAATTTCTCAGATTaGTGCACAGGACTCCATTCCAACCTTCCAGATTTAAGTTCTGAA +
Preference number: 2 (lower is better)
Translates to: FSFNLTAFSLQNFSD*CTGLHSNLPDLSSE
Trigger: TTCAGAACTTAAATCTGGAAGGTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTGGAGAGAGAATGCTGTGAGGTTAAATGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR GCA 72 bp CGGGCGGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTaGTTGCCAAGGTATTCCCAGTTGTGCACCATGAGC +
Preference number: 3 (lower is better)
Translates to: RAAAVWGCSDWS*LPRYSQLCTMS
Trigger: GCTCATGGTGCACAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR TCA 72 bp CCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTaGCCCGGAGCATCAGCTGCAAACACCCGGCCACGC +
Preference number: 3 (lower is better)
Translates to: PHLLPPKQSGTH*PGASAANTRPR
Trigger: GCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
3UTR GCA 72 bp CAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTaGAAACACCCGGCCACGCACTGCACATACTGCGAA +
Preference number: 3 (lower is better)
Translates to: QAKRYSLTRSIS*KHPATHCTYCE
Trigger: TTCGCAGTATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
3UTR TCA 72 bp GGAGCTGCTTGCCAAGGTATTCCCAGTTGTGCACCATaGGCTTCTGCACGGCCAGCAGAGCATTATAGCGGA +
Preference number: 3 (lower is better)
Translates to: GAACQGIPSCAP*ASARPAEHYSG
Trigger: TCCGCTATAATGCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTTGGCAAGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR GCA 72 bp ACCCGGAGCATCAGCTGCAAACACCCGGCCACGCACTaGACATACTGCGAACTATCACTTGAAGAGACTGTT +
Preference number: 3 (lower is better)
Translates to: TRSISCKHPATH*TYCELSLEETV
Trigger: AACAGTCTCTTCAAGTGATAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR CAA 90 bp ACTGTTCCTGTTTCAACAGCAACACCGCTACCACGCAGTTTCTGTGAACTCAGCGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGC +
Preference number: 3 (lower is better)
Translates to: TVPVSTATPLPRSFCELSAKRYS*TRSISC
Trigger: GCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGC...GCTGAGTTCACAGAAACTGCGTGGTAGCGGTGTTGCTGTTGAAACAGGAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR CAA 90 bp TGGGGCTGCTCGGACTGGAGCTGCTTGCCAAGGTATTCCCAGTTGTGCACCATGACTGCGAACTATCACTaGAAGAGACTGTTCCTGTTT +
Preference number: 3 (lower is better)
Translates to: WGCSDWSCLPRYSQLCTMTANYH*KRLFLF
Trigger: AAACAGGAACAGTCTCTTCAAGTGATAGTTCGCAGT...CATGGTGCACAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR CAA 90 bp GGAGCTGAAAGCCACACTTGTTACTCAACACTCCCATTATGCAATTTACCCCATACTACTGGTTCTGCATaGAGGCGGAGGGGAAGGCCA +
Preference number: 3 (lower is better)
Translates to: GAESHTCYSTLPLCNLPHTTGSA*RRRGRP
Trigger: TGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAGT...ATGGGGTAAATTGCATAATGGGAGTGTTGAGTAACAAGTGTGGCTTTCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR-3UTR CAA 90 bp ACTGGAGCTGAAAGCCACACTTGTTACTCAACACTCCCATTATGCAATTTACCCGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGC +
Preference number: 3 (lower is better)
Translates to: TGAESHTCYSTLPLCNLPAKRYS*TRSISC
Trigger: GCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGC...GGGTAAATTGCATAATGGGAGTGTTGAGTAACAAGTGTGGCTTTCAGCTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
3UTR GCA 72 bp GTTACTCAACACTCCCATTATGCAATTTACCCCATCTaGTTCCACCCAAGCAAAGCGGTACTCATTGACCCG +
Preference number: 3 (lower is better)
Translates to: VTQHSHYAIYPI*FHPSKAVLIDP
Trigger: CGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
3UTR CCA 72 bp CATATGAACAGTGAAGGGATCCTGGCGATTCAACATTaGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACA +
Preference number: 3 (lower is better)
Translates to: HMNSEGILAIQH*QKVGPRSVLAT
Trigger: TGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGGATCCCTTCACTGTTCATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
3UTR-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAACTACTGGTTCTGCATaGAGGCGGAGGGGAAGGCCA +
Preference number: 3 (lower is better)
Translates to: FAIHYFATILPIWFEKRQTTGSA*RRRGRP
Trigger: TGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAGT...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
3UTR CAA 72 bp GCGGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTGCTaGCCAAGGTATTCCCAGTTGTGCACCATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: AAAVWGCSDWSC*PRYSQLCTMSF
Trigger: GAAGCTCATGGTGCACAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp CCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGGCAGCGGTCTGGGGCTaGTCGGACTGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PICFHPSKAVLIDPEHQLAAVWG*SDWSCL
Trigger: CAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGC...CAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp CACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGCAAACACCCGGCCAGAGGTCTGAGCAGTaGAGGGAGACTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HPSKAVLIDPEHQLQTPGQRSEQ*RETPGA
Trigger: GGCTCCCGGAGTCTCCCTCCACTGCTCAGACCTCTG...GCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
3UTR CAA 72 bp ACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGCAAACACCCGGCCACG +
Preference number: 4 (lower is better)
Translates to: TPSASTQAKRYS*TRSISCKHPAT
Trigger: CGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR CCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGGGACACAGCCGGGCTaGGGCGCCGCGTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRGTQPG*GAASEP
Trigger: TGGCTCTGACGCGGCGCCCCAGCCCGGCTGTGTCCC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp ACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCGGGCGGCAGCGGTCTaGGGCTGCTCGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLPLCNLPHLLPPKQSGTRAAAV*GCSDWS
Trigger: GCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCG...AGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp TGGGGCTGCTCGGACTGGAGCTGCTTGCCAAGGTATTCCCAGTTGTGCACCATGGATGCATGTGGTTCATaGCCAGCTGCTTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: WGCSDWSCLPRYSQLCTMDACGS*PAASHR
Trigger: TCGGTGGGAAGCAGCTGGTCATGAACCACATGCATC...CATGGTGCACAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp GGGATCCTGGCGATTCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTCAGAGGTCTGAGCAGTaGAGGGAGACTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GILAIQHWQKVGPRSVLAQRSEQ*RETPGA
Trigger: GGCTCCCGGAGTCTCCCTCCACTGCTCAGACCTCTG...AGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGAGGCGCCGGTCACGTaGTCGGAGGCACGTGACTGC +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRREAPVT*SEARDC
Trigger: GCAGTCACGTGCCTCCGATCACGTGACCGGCGCCTC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR TCA 90 bp TGCCTCGTGGATAATGCCGCACATATTCTCCAACATCGTGAGCAGCAACAGCTAGCGGCCGCAGTAGAATaGCAGAGGCGCCGGTCACGT +
Preference number: 4 (lower is better)
Translates to: CLVDNAAHILQHREQQQLAAAVE*QRRRSR
Trigger: ACGTGACCGGCGCCTCTGTCATTCTACTGCGGCCGC...TAGCTGTTGCTGCTCACGATGTTGGAGAATATGTGCGGCATTATCCACGAGGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp CTTGCCAAGGTATTCCCAGTTGTGCACCATGAGCTTCTGCACGGCCAGCAGAGCTGCTCGGACTGGAGCTaGTTGCCAAGGTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAKVFPVVHHELLHGQQSCSDWS*LPRYSQ
Trigger: CTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCA...GCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTTGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCGGGCGGCAGCGGTCTaGGGCTGCTCGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALRAAAV*GCSDWS
Trigger: GCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTCCGGGAGCCGAAAGTaGAGCGGGTCCCGCACCAAG +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRSGSRK*SGSRTK
Trigger: CTTGGTGCGGGACCCGCTTCACTTTCGGCTCCCGGA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGCGGCCGCAGTAGAATaGCAGAGGCGCCGGTCACGT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRAAAVE*QRRRSR
Trigger: ACGTGACCGGCGCCTCTGTCATTCTACTGCGGCCGC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGCAGCGGTCTGGGGCTaGTCGGACTGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRAAVWG*SDWSCL
Trigger: CAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGAGGCACGTGACTGCTaGGGAAGGCGGAAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRREARDC*GRRKPG
Trigger: TCCCGGCTTCCGCCTTCCGCAGCAGTCACGTGCCTC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR GCA 90 bp TGCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGCAAACACACCCGGCCACGCACTaGACATACTGCGAACTCAGT +
Preference number: 4 (lower is better)
Translates to: CFHPSKAVLIDPEHQLQTHPATH*TYCELS
Trigger: ACTGAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTG...TGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522849.1
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCGGGCGGCAGCGGTCTaGGGCTGCTCGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLRAAAV*GCSDWS
Trigger: GCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp GGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTAACACGTCCGGGAGCCGAAAGTaGAGCGGGTCCCGCACCAAG +
Preference number: 4 (lower is better)
Translates to: GPRSVLATSCIVKENANTSGSRK*SGSRTK
Trigger: CTTGGTGCGGGACCCGCTTCACTTTCGGCTCCCGGA...CGTGTTAGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR TCA 90 bp TACTCAACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCTCCGGGAGCCGAAAGTaGAGCGGGTCCCGCACCAAG +
Preference number: 4 (lower is better)
Translates to: YSTLPLCNLPHLLPPKQSSGSRK*SGSRTK
Trigger: CTTGGTGCGGGACCCGCTTCACTTTCGGCTCCCGGA...GCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp ACTGTTCCTGTTTCAACAGCAACACCGCTACCACGCAGTTTCTGTGAACTCAGCCTACTGGTTCTGCATTaGGGCGGAGGGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TVPVSTATPLPRSFCELSLLVLH*GGGEGQ
Trigger: CTGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAG...GCTGAGTTCACAGAAACTGCGTGGTAGCGGTGTTGCTGTTGAAACAGGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp CCGGAGCATCAGCTGCAAACACCCGGCCACGCACTGCACATACTGCGAACTCAGGCCACGCAGTGTTCTTaGTACATCTTGCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: PEHQLQTPGHALHILRTQATQCS*YILHSQ
Trigger: TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGC...CTGAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522849.1
CDS-3UTR CCA 90 bp ACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGCAAACACCCGGCCACAGTGAAGGGATCCTaGCGATTCAACATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TQAKRYSLTRSISCKHPATVKGS*RFNIGR
Trigger: TCTGCCAATGTTGAATCGCCAGGATCCCTTCACTGT...GGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTCCGGGAGCCGAAAGTaGAGCGGGTCCCGCACCAAG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSGSRK*SGSRTK
Trigger: CTTGGTGCGGGACCCGCTTCACTTTCGGCTCCCGGA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp CCGGAGCATCAGCTGCAAACACCCGGCCACGCACTGCACATACTGCGAACTCAGACCACGCAGTTTCTGTaGACTCAGCTGAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: PEHQLQTPGHALHILRTQTTQFL*TQLSFY
Trigger: ATAAAAACTCAGCTGAGTTCACAGAAACTGCGTGGT...CTGAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522849.1
CDS-3UTR TCA 90 bp ATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGCAAAGCGGTACTCATTaGCCCGGAGCATCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: MQFTPSASTQAKRYSLTRQSGTH*PGASAA
Trigger: TGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTG...CCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCCCAGTTGTGCACCATaGGCTTCTGCACGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRPSCAP*ASARPA
Trigger: TGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TACTCAACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCACCCGGAGCATCAGCTaGAAACACCCGGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: YSTLPLCNLPHLLPPKQSTRSIS*KHPATH
Trigger: GTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGT...GCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGCAGCGGTCTGGGGCTaGTCGGACTGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALAAVWG*SDWSCL
Trigger: CAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp GGGATCCTGGCGATTCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTCTGGCGATTCAACATTaGCAGAAAGTAGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: GILAIQHWQKVGPRSVLALAIQH*QKVGPR
Trigger: GCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAG...AGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR CCA 90 bp ATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGCAGTGCTCCCACTACTaGTTCTGCATTGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: MQFTPSASTQAKRYSLTRQCSHY*FCIEAE
Trigger: CTCCGCCTCAATGCAGAACCAGTAGTGGGAGCACTG...CCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp GGGATCCTGGCGATTCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACCTGCTGGTCTTCATaGTGCATGTGGTTCATGACC +
Preference number: 4 (lower is better)
Translates to: GILAIQHWQKVGPRSVLATCWSS*CMWFMT
Trigger: GGTCATGAACCACATGCATCATGAAGACCAGCAGGT...AGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGGATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGACCCGGAGCATCAGCTaGAAACACCCGGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALTRSIS*KHPATH
Trigger: GTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp CCGGAGCATCAGCTGCAAACACCCGGCCACGCACTGCACATACTGCGAACTCAGTCAACACTCCCATTATaGAATTTACCCCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: PEHQLQTPGHALHILRTQSTLPL*NLPHLL
Trigger: AAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGA...CTGAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522849.1
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTGCTTCCCACCGAGCTaGTCGATGACCCGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRCFPPS*SMTRLP
Trigger: AGGCAAACGGGTCATCGAGCAGCTCGGTGGGAAGCA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGCAGCGGTCTGGGGCTaGTCGGACTGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLAAVWG*SDWSCL
Trigger: CAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTGGGGCTGCTCGGACTaGAGCTGCTTGCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRWGCSD*SCLPRY
Trigger: ATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTCAGGTCCAGAGGTCTaGGCAGTGGAGGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSGPEV*AVEGDS
Trigger: GGAGTCTCCCTCCACTGCTCAGACCTCTGGACCTGA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCAAAGCGGTACTCATTaGCCCGGAGCATCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRQSGTH*PGASAA
Trigger: TGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGATGCATGTGGTTCATaGCCAGCTGCTTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRDACGS*PAASHR
Trigger: TCGGTGGGAAGCAGCTGGTCATGAACCACATGCATC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCCCAGTTGTGCACCATaGGCTTCTGCACGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALPSCAP*ASARPA
Trigger: TGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp CTCTCTCCAAAATTTCTCAGATTTGTGCACAGGACTCCATTCCAACCTTCCAGACCCAGTTGTGCACCATaGGCTTCTGCACGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSPKFLRFVHRTPFQPSRPSCAP*ASARPA
Trigger: TGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGG...TCTGGAAGGTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTGGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCTACTGGTTCTGCATTaGGGCGGAGGGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALLLVLH*GGGEGQ
Trigger: CTGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGACTGCAAGAGTCGCCTaGCCTGGTCTGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALTARVA*PGLQPE
Trigger: CTCAGGCTGCAGACCAGGTCAGGCGACTCTTGCAGT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCACCCGGCCACGCACTaGACATACTGCGAACTATCA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRHPATH*TYCELS
Trigger: TGATAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGACCCGGAGCATCAGCTaGAAACACCCGGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLTRSIS*KHPATH
Trigger: GTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAAGGAGGGGCGGGCGCTaGGGCGGGGCTTGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQRRGGR*GGACSV
Trigger: CACCGAACAAGCCCCGCCGCAGCGCCCGCCCCTCCT...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCGATCGGCCCCTGGCTaGCTCTCTAGCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLRSAPG*LSSLSS
Trigger: AGAGCTGAGGCTAGAGAGGCAGCCAGGGGCCGATCG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520188.5
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCAGAGGTCTGAGCAGTaGAGGGAGACTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLQRSEQ*RETPGA
Trigger: GGCTCCCGGAGTCTCCCTCCACTGCTCAGACCTCTG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp GATTCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATTGGGGCTGCTCGGACTaGAGCTGCTTGCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: DSTLAESRATQCSCYILHWGCSD*SCLPRY
Trigger: ATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCA...ATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCGGGCGGCAGCGGTCTaGGGCTGCTCGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDRAAAV*GCSDWS
Trigger: GCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp CTGGAGCTGAAAGCCACACTTGTTACTCAACACTCCCATTATGCAATTTACCCCCAAAGCGGTACTCATTaGCCCGGAGCATCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LELKATLVTQHSHYAIYPQSGTH*PGASAA
Trigger: TGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTG...GGGGTAAATTGCATAATGGGAGTGTTGAGTAACAAGTGTGGCTTTCAGCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR TCA 90 bp TCTGGGGCTGCTCGGACTGGAGCTGCTTGCCAAGGTATTCCCAGTTGTGCACCATGCCAGGAGCCATATTaGAAAAATCATTTGATACTG +
Preference number: 4 (lower is better)
Translates to: SGAARTGAACQGIPSCAPCQEPY*KNHLIL
Trigger: CAGTATCAAATGATTTTTTCAATATGGCTCCTGGCA...TGGTGCACAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCTACTGGTTCTGCATTaGGGCGGAGGGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLLLVLH*GGGEGQ
Trigger: CTGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGACCTGGTCTGCAGCCTaGGACCAAACAACGCGAGGG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLTWSAA*DQTTRG
Trigger: CCCTCGCGTTGTTTGGTCTCAGGCTGCAGACCAGGT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR GCA 90 bp ATGTGGTTCATGACCAGCTGCTTCCCACCGAGCTGCTCGATGACCCGTTTGCCTGAACGGTCTGTTCTTTaGAGATATGAGTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: MWFMTSCFPPSCSMTRLPERSVL*RYESSD
Trigger: ATCTGATGACTCATATCTGCAAAGAACAGACCGTTC...AGGCAAACGGGTCATCGAGCAGCTCGGTGGGAAGCAGCTGGTCATGAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp TCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTCACCCGGCCACGCACTaGACATACTGCGAACTATCA +
Preference number: 4 (lower is better)
Translates to: SHYAIYPICFHPSKAVLIHPATH*TYCELS
Trigger: TGATAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTG...AATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp TTGATATCTTCGCTGATATCTTCATCATCGTACTTCTGCTGTTCCAAGTTCTCCACCCGGAGCATCAGCTaGAAACACCCGGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: LISSLISSSSYFCCSKFSTRSIS*KHPATH
Trigger: GTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGT...GGAGAACTTGGAACAGCAGAAGTACGATGATGAAGATATCAGCGAAGATATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp ATGTGGTTCATGACCAGCTGCTTCCCACCGAGCTGCTCGATGACCCGTTTGCCTAATTTCTCAGATTTGTaGACAGGACTCCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: MWFMTSCFPPSCSMTRLPNFSDL*TGLHSN
Trigger: GTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATT...AGGCAAACGGGTCATCGAGCAGCTCGGTGGGAAGCAGCTGGTCATGAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTGGTTCATGACCAGCTaGTTCCCACCGAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALWFMTS*FPPSCS
Trigger: CGAGCAGCTCGGTGGGAAGCAGCTGGTCATGAACCA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTGCACCATGAGCTTCTaGACGGCCAGCAGAGCATTA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRCTMSF*TASRAL
Trigger: TAATGCTCTGCTGGCCGTGCAGAAGCTCATGGTGCA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCACCCGGCCACGCACTaGACATACTGCGAACTCTGT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALHPATH*TYCELC
Trigger: ACAGAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR CCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCTGGCGATTCAACATTaGCAGAAAGTAGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRLAIQH*QKVGPR
Trigger: GCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp AACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACCTGGCGATTCAACATTaGCAGAAAGTAGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: NTPIMQFTPSASTQAKRYLAIQH*QKVGPR
Trigger: GCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAG...GTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTGGGGCTGCTCGGACTaGAGCTGCTTGCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALWGCSD*SCLPRY
Trigger: ATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp CTTGCCAAGGTATTCCCAGTTGTGCACCATGAGCTTCTGCACGGCCAGCAGAGCATAGTTAGTATATACTaGACGGTCTGTTCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LAKVFPVVHHELLHGQQSIVSIY*TVCSLQ
Trigger: CTGCAAAGAACAGACCGTTCAGTATATACTAACTAT...GCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTTGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGAGGTGTTCACACATTTaGGGACTGAATGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRRCSHI*GLNARS
Trigger: GCTCCTGGCATTCAGTCCTCAAATGTGTGAACACCT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTAGGTGTTCACACATTTaGGGACTGAATGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TLPLCNLPHLLPPKQSGTRCSHI*GLNARS
Trigger: GCTCCTGGCATTCAGTCCTCAAATGTGTGAACACCT...AGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGACCTGCTGGTCTTCATaGTGCATGTGGTTCATGACC +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRTCWSS*CMWFMT
Trigger: GGTCATGAACCACATGCATCATGAAGACCAGCAGGT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCACCCGGCCACGCACTaGACATACTGCGAACTATCA +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALHPATH*TYCELS
Trigger: TGATAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGCAATTTACCCCATCTaGTTCCACCCAAGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRAIYPI*FHPSKA
Trigger: CGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ACTCAACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGCAATTTACCCCATCTaGTTCCACCCAAGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: TQHSHYAIYPICFHPSKAAIYPI*FHPSKA
Trigger: CGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGC...CGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTGCTTCCCACCGAGCTaGTCGATGACCCGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLCFPPS*SMTRLP
Trigger: AGGCAAACGGGTCATCGAGCAGCTCGGTGGGAAGCA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTGGTTCATGACCAGCTaGTTCCCACCGAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLWFMTS*FPPSCS
Trigger: CGAGCAGCTCGGTGGGAAGCAGCTGGTCATGAACCA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp AAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTTGGTTCATGACCAGCTaGTTCCCACCGAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: KVGPRSVLATSCIVKENAWFMTS*FPPSCS
Trigger: CGAGCAGCTCGGTGGGAAGCAGCTGGTCATGAACCA...AGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp ACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTCAATGCACCATGAGCTTCTaGACGGCCAGCAGAGCATTA +
Preference number: 4 (lower is better)
Translates to: TLAESRATQCSCYILHSQCTMSF*TASRAL
Trigger: TAATGCTCTGCTGGCCGTGCAGAAGCTCATGGTGCA...TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGAGGTATTCCCAGTTGTaGACCATGAGCTTCTGCACG +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRRYSQL*TMSFCT
Trigger: CGTGCAGAAGCTCATGGTGCACAACTGGGAATACCT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TGCCATATGAACAGTGAAGGGATCCTGGCGATTCAACATTGGCAGAAAGTAGGGAGGTATTCCCAGTTGTaGACCATGAGCTTCTGCACG +
Preference number: 4 (lower is better)
Translates to: CHMNSEGILAIQHWQKVGRYSQL*TMSFCT
Trigger: CGTGCAGAAGCTCATGGTGCACAACTGGGAATACCT...CCCTACTTTCTGCCAATGTTGAATCGCCAGGATCCCTTCACTGTTCATATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTGCTCGGACTGGAGCTaGTTGCCAAGGTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALCSDWS*LPRYSQ
Trigger: CTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTCCCACTACTGGTTCTaGATTGAGGCGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSHYWF*IEAEGK
Trigger: CTTCCCCTCCGCCTCAATGCAGAACCAGTAGTGGGA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGCAAGCTGGAGAAACTaGAAGAGTCGCCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALASWRN*KSRLTW
Trigger: CCAGGTCAGGCGACTCTTGCAGTTTCTCCAGCTTGC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR CCA 90 bp GCTGCAAACACCCGGCCACGCACTGCACATACTGCGAACTCAGTTAATTTTCTTACAGTGAAGGGATCCTaGCGATTCAACATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: AANTRPRTAHTANSVNFLTVKGS*RFNIGR
Trigger: TCTGCCAATGTTGAATCGCCAGGATCCCTTCACTGT...AAGAAAATTAACTGAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTGTTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522849.1
CDS-3UTR CCA 90 bp GCCAAGGTATTCCCAGTTGTGCACCATGAGCTTCTGCACGGCCAGCAGAGCATTAATGAACTAAGGTCCTaGACACTCTCTCCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: AKVFPVVHHELLHGQQSINELRS*TLSPSF
Trigger: AAAACTTGGAGAGAGTGTCCAGGACCTTAGTTCATT...AATGCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp AAGGTATTCCCAGTTGTGCACCATGAGCTTCTGCACGGCCAGCAGAGCATTATAGCAACAGCTAAGACTTaGGGATCATCTGACACTTCC +
Preference number: 4 (lower is better)
Translates to: KVFPVVHHELLHGQQSIIATAKT*GSSDTS
Trigger: GGAAGTGTCAGATGATCCCCAAGTCTTAGCTGTTGC...TATAATGCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCAGTGCTCCCACTACTaGTTCTGCATTGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALQCSHY*FCIEAE
Trigger: CTCCGCCTCAATGCAGAACCAGTAGTGGGAGCACTG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGATTCTTGCTGCCATATaGACAGTGAAGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRILAAI*TVKGSW
Trigger: CCAGGATCCCTTCACTGTTCATATGGCAGCAAGAAT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCAAAGCGGTACTCATTaGCCCGGAGCATCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLQSGTH*PGASAA
Trigger: TGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCACACATTTGAGGACTaGATGCCAGGAGCCATATTG +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRHTFED*MPGAIL
Trigger: CAATATGGCTCCTGGCATTCAGTCCTCAAATGTGTG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCACACATTTGAGGACTaGATGCCAGGAGCCATATTG +
Preference number: 4 (lower is better)
Translates to: TLPLCNLPHLLPPKQSGTHTFED*MPGAIL
Trigger: CAATATGGCTCCTGGCATTCAGTCCTCAAATGTGTG...AGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGATGCATGTGGTTCATaGCCAGCTGCTTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLDACGS*PAASHR
Trigger: TCGGTGGGAAGCAGCTGGTCATGAACCACATGCATC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTGCTCGGACTGGAGCTaGTTGCCAAGGTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLCSDWS*LPRYSQ
Trigger: CTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAGCAGCGGTCTGGGGCTaGTCGGACTGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQAAVWG*SDWSCL
Trigger: CAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGC...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTCCCACTACTGGTTCTaGATTGAGGCGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLSHYWF*IEAEGK
Trigger: CTTCCCCTCCGCCTCAATGCAGAACCAGTAGTGGGA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACTCGGAGGCACGTGACTaGTGCGGAAGGCGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDSEARD*CGRRKP
Trigger: CGGCTTCCGCCTTCCGCAGCAGTCACGTGCCTCCGA...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTCGCCTGACCTGGTCTaGAGCCTGAGACCAAACAAC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLSPDLV*SLRPNN
Trigger: GTTGTTTGGTCTCAGGCTGCAGACCAGGTCAGGCGA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR CCA 90 bp CTTGCCAAGGTATTCCCAGTTGTGCACCATGAGCTTCTGCACGGCCAGCAGAGCCTCGGATATCCATTTTaGTCATCTAAACTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: LAKVFPVVHHELLHGQQSLGYPF*SSKLRN
Trigger: ATTACGAAGTTTAGATGACCAAAATGGATATCCGAG...GCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTTGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCTGGCGATTCAACATTaGCAGAAAGTAGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALLAIQH*QKVGPR
Trigger: GCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGACAGTGAAGGGATCCTaGCGATTCAACATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRTVKGS*RFNIGR
Trigger: TCTGCCAATGTTGAATCGCCAGGATCCCTTCACTGT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp TGCCTCGTGGATAATGCCGCACATATTCTCCAACATCGTGAGCAGCAACAGCTAGCCAGGGCATATTCTTaGCGAGTTTCTCTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CLVDNAAHILQHREQQQLARAYS*RVSLSV
Trigger: AACTGAAAGAGAAACTCGCCAAGAATATGCCCTGGC...TAGCTGTTGCTGCTCACGATGTTGGAGAATATGTGCGGCATTATCCACGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGCAACAGCTAAGACTTaGGGATCATCTGACACTTCC +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRATAKT*GSSDTS
Trigger: GGAAGTGTCAGATGATCCCCAAGTCTTAGCTGTTGC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCAGTGCTCCCACTACTaGTTCTGCATTGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLQCSHY*FCIEAE
Trigger: CTCCGCCTCAATGCAGAACCAGTAGTGGGAGCACTG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCCCGAGTCCGTAACTTaGGCCCCGGAGCGACGCAAG +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDPESVT*APERRK
Trigger: CTTGCGTCGCTCCGGGGCCCAAGTTACGGACTCGGG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGACGCACCAGGCAAGCTaGAGAAACTGCAAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLTHQAS*RNCKSR
Trigger: GCGACTCTTGCAGTTTCTCCAGCTTGCCTGGTGCGT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR TCA 90 bp TGCCTCGTGGATAATGCCGCACATATTCTCCAACATCGTGAGCAGCAACAGCTAGATAGGATTGCCAGTTaGCTTTGTTTGCACGAACTT +
Preference number: 4 (lower is better)
Translates to: CLVDNAAHILQHREQQQLDRIAS*LCLHEL
Trigger: AAGTTCGTGCAAACAAAGTCAACTGGCAATCCTATC...TAGCTGTTGCTGCTCACGATGTTGGAGAATATGTGCGGCATTATCCACGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp TCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTATTCTTGCTGCCATATaGACAGTGAAGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: SHYAIYPICFHPSKAVLIILAAI*TVKGSW
Trigger: CCAGGATCCCTTCACTGTTCATATGGCAGCAAGAAT...AATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCTGCGAACTATCACTTaGAGAGACTGTTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRLRTIT*RDCSCF
Trigger: GAAACAGGAACAGTCTCTTCAAGTGATAGTTCGCAG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGTGTTCACACATTTaGGGACTGAATGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALRCSHI*GLNARS
Trigger: GCTCCTGGCATTCAGTCCTCAAATGTGTGAACACCT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACGTGATCGGAGGCACGTaGCTGCTGCGGAAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDVIGGT*LLRKAE
Trigger: TTCCGCCTTCCGCAGCAGTCACGTGCCTCCGATCAC...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGTTTGCACGAACTTCTaGAGCCTTGGCAGCAATAAT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRVCTNF*SLGSNN
Trigger: ATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAAC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
CDS-3UTR GCA 90 bp ACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTGTTTGCACGAACTTCTaGAGCCTTGGCAGCAATAAT +
Preference number: 4 (lower is better)
Translates to: TLPLCNLPHLLPPKQSGTVCTNF*SLGSNN
Trigger: ATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAAC...AGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGCCACGCAGTGTTCTTaGTACATCTTGCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRATQCS*YILHSQ
Trigger: TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ATCTGCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGCAACTTGGCAATAATTCTTaGTGCCATATGAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: ICFHPSKAVLIDPEHQLQLGNNS*CHMNSE
Trigger: TTCACTGTTCATATGGCAGCAAGAATTATTGCCAAG...TTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGACGCACTGCACATACTaGGAACTATCACTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRTHCTY*ELSLEE
Trigger: CTCTTCAAGTGATAGTTCGCAGTATGTGCAGTGCGT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACACCCGGAGCATCAGCTaGAAACACCCGGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDTRSIS*KHPATH
Trigger: GTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGT...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTGCACCATGAGCTTCTaGACGGCCAGCAGAGCATTA +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLCTMSF*TASRAL
Trigger: TAATGCTCTGCTGGCCGTGCAGAAGCTCATGGTGCA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCAGAGGTCTGAGCAGTaGAGGGAGACTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDQRSEQ*RETPGA
Trigger: GGCTCCCGGAGTCTCCCTCCACTGCTCAGACCTCTG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCTGGCGATTCAACATTaGCAGAAAGTAGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLLAIQH*QKVGPR
Trigger: GCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp ACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTCAAACAGTGAAGGGATCCTaGCGATTCAACATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TLAESRATQCSCYILHSQTVKGS*RFNIGR
Trigger: TCTGCCAATGTTGAATCGCCAGGATCCCTTCACTGT...TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGACCCGTTTGCCTCGTaGATAATGCCGCACATATTC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALDPFAS*IMPHIF
Trigger: GAATATGTGCGGCATTATCCACGAGGCAAACGGGTC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp CTCTCTCCAAAATTTCTCAGATTTGTGCACAGGACTCCATTCCAACCTTCCAGAGACCCGTTTGCCTCGTaGATAATGCCGCACATATTC +
Preference number: 4 (lower is better)
Translates to: LSPKFLRFVHRTPFQPSRDPFAS*IMPHIF
Trigger: GAATATGTGCGGCATTATCCACGAGGCAAACGGGTC...TCTGGAAGGTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTGGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTTCGGTGCGGACAACTaGATTCCCGAGTCCGTAACT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLFGADN*IPESVT
Trigger: AGTTACGGACTCGGGAATCCAGTTGTCCGCACCGAA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGGAAGAAAAGCAATCTaGCAACCGGGGGCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLGRKAI*QPGAEE
Trigger: TTCTTCGGCCCCCGGTTGCCAGATTGCTTTTCTTCC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR CCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGACACCTACAGCTCCTTaGAAAATGGTGAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRTPTAP*KMVNGL
Trigger: GAGACCATTCACCATTTTCCAAGGAGCTGTAGGTGT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520188.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGACCACGCAGTTTCTGTaGACTCAGCTGAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRTTQFL*TQLSFY
Trigger: ATAAAAACTCAGCTGAGTTCACAGAAACTGCGTGGT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCACACATTTGAGGACTaGATGCCAGGAGCCATATTG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALHTFED*MPGAIL
Trigger: CAATATGGCTCCTGGCATTCAGTCCTCAAATGTGTG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTTCAGAACTTTGCACTaGATCATAGCCAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRFRTLH*IIARAY
Trigger: ATATGCCCTGGCTATGATTCAGTGCAAAGTTCTGAA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGACCTGCTGGTCTTCATaGTGCATGTGGTTCATGACC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLTCWSS*CMWFMT
Trigger: GGTCATGAACCACATGCATCATGAAGACCAGCAGGT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCCCAGTTGTGCACCATaGGCTTCTGCACGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDPSCAP*ASARPA
Trigger: TGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTTCAACAAATCTGGTTaGGGCCTGGAAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRFNKSG*GLEEKQ
Trigger: TTGCTTTTCTTCCAGGCCTCAACCAGATTTGTTGAA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR GCA 90 bp TCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTACGCACTGCACATACTaGGAACTATCACTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: STLAESRATQCSCYILHSTHCTY*ELSLEE
Trigger: CTCTTCAAGTGATAGTTCGCAGTATGTGCAGTGCGT...ACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGCAATTTACCCCATCTaGTTCCACCCAAGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLAIYPI*FHPSKA
Trigger: CGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGAGGTATTCCCAGTTGTaGACCATGAGCTTCTGCACG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLRYSQL*TMSFCT
Trigger: CGTGCAGAAGCTCATGGTGCACAACTGGGAATACCT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ATAGTCAAAGAAAATGCTAACACGCTGATGATTTTCCTGCAGCATATCATCCACTCCCACTACTGGTTCTaGATTGAGGCGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IVKENANTLMIFLQHIIHSHYWF*IEAEGK
Trigger: CTTCCCCTCCGCCTCAATGCAGAACCAGTAGTGGGA...GTGGATGATATGCTGCAGGAAAATCATCAGCGTGTTAGCATTTTCTTTGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACGCGGGGCTTGTTCGGTaGGGACAACTGGATTCCCGA +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDAGLVR*GQLDSR
Trigger: TCGGGAATCCAGTTGTCCGCACCGAACAAGCCCCGC...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGACGCACTGCACATACTaGGAACTCTGTGAACTCAGC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLTHCTY*ELCELS
Trigger: GCTGAGTTCACAGAGTTCGCAGTATGTGCAGTGCGT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGCAACAGCTAAGACTTaGGGATCATCTGACACTTCC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALATAKT*GSSDTS
Trigger: GGAAGTGTCAGATGATCCCCAAGTCTTAGCTGTTGC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGACCCGTTTGCCTCGTaGATAATGCCGCACATATTC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLDPFAS*IMPHIF
Trigger: GAATATGTGCGGCATTATCCACGAGGCAAACGGGTC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGATTCTTGCTGCCATATaGACAGTGAAGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLILAAI*TVKGSW
Trigger: CCAGGATCCCTTCACTGTTCATATGGCAGCAAGAAT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp GATTCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATACCACGCAGTTTCTGTaGACTCAGCTGAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: DSTLAESRATQCSCYILHTTQFL*TQLSFY
Trigger: ATAAAAACTCAGCTGAGTTCACAGAAACTGCGTGGT...ATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp GGAGCTGAAAGCCACACTTGTTACTCAACACTCCCATTATGCAATTTACCCCATCTGCGAACTATCACTTaGAGAGACTGTTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GAESHTCYSTLPLCNLPHLRTIT*RDCSCF
Trigger: GAAACAGGAACAGTCTCTTCAAGTGATAGTTCGCAG...ATGGGGTAAATTGCATAATGGGAGTGTTGAGTAACAAGTGTGGCTTTCAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCAGACAGAACTGGAATaGTATTATAGCGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLQTELE*YYSAAG
Trigger: ACCTGCGGCGCTATAATATCATTCCAGTTCTGTCTG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp AAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTCAGACAGAACTGGAATaGTATTATAGCGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: KVGPRSVLATSCIVKENAQTELE*YYSAAG
Trigger: ACCTGCGGCGCTATAATATCATTCCAGTTCTGTCTG...AGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp ACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTCAATTCAGAACTTTGCACTaGATCATAGCCAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: TLAESRATQCSCYILHSQFRTLH*IIARAY
Trigger: ATATGCCCTGGCTATGATTCAGTGCAAAGTTCTGAA...TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTCTCCCAATTTGGTTTaGAAAGAGACAACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRSPNLV*KETTVD
Trigger: GTCAACTGTTGTCTCTTTTCAAACCAAATTGGGAGA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGATACTGCGAACTCTGTaGACTCAGCTGAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRILRTL*TQLSFY
Trigger: ATAAAAACTCAGCTGAGTTCACAGAGTTCGCAGTAT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGTTTGCACGAACTTCTaGAGCCTTGGCAGCAATAAT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALVCTNF*SLGSNN
Trigger: ATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAAC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGAACGGTCTGTTCTTTaGAGATATGAGTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRERSVL*RYESSD
Trigger: ATCTGATGACTCATATCTGCAAAGAACAGACCGTTC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGCCACGCAGTGTTCTTaGTACATCTTGCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALATQCS*YILHSQ
Trigger: TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp CTCTCTCCAAAATTTCTCAGATTTGTGCACAGGACTCCATTCCAACCTTCCAGAGCCACGCAGTGTTCTTaGTACATCTTGCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: LSPKFLRFVHRTPFQPSRATQCS*YILHSQ
Trigger: TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGC...TCTGGAAGGTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTGGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTCAACACTCCCATTATaGAATTTACCCCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRSTLPL*NLPHLL
Trigger: AAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAATGCTTCCCACCGAGCTaGTCGATGACCCGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQCFPPS*SMTRLP
Trigger: AGGCAAACGGGTCATCGAGCAGCTCGGTGGGAAGCA...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp TTTCTCTTTGACAGACTCCTGAAGGATATCAGACAGAACTGGAATGATATTATATGCTTCCCACCGAGCTaGTCGATGACCCGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: FLFDRLLKDIRQNWNDIICFPPS*SMTRLP
Trigger: AGGCAAACGGGTCATCGAGCAGCTCGGTGGGAAGCA...TATAATATCATTCCAGTTCTGTCTGATATCCTTCAGGAGTCTGTCAAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGACAGTGAAGGGATCCTaGCGATTCAACATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLTVKGS*RFNIGR
Trigger: TCTGCCAATGTTGAATCGCCAGGATCCCTTCACTGT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGCCAGGGCATATTCTTaGCGAGTTTCTCTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALARAYS*RVSLSV
Trigger: AACTGAAAGAGAAACTCGCCAAGAATATGCCCTGGC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGCAACAGCTAAGACTTaGGGATCATCTGACACTTCC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLATAKT*GSSDTS
Trigger: GGAAGTGTCAGATGATCCCCAAGTCTTAGCTGTTGC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACTGGGGCTGCTCGGACTaGAGCTGCTTGCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDWGCSD*SCLPRY
Trigger: ATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCA...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGATCAAGAGGCAGATATaGTCTTCTAACTCCCGGCTA +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALIKRQI*SSNSRL
Trigger: TAGCCGGGAGTTAGAAGACCATATCTGCCTCTTGAT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520188.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGATAGGATTGCCAGTTaGCTTTGTTTGCACGAACTT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALDRIAS*LCLHEL
Trigger: AAGTTCGTGCAAACAAAGTCAACTGGCAATCCTATC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGATAGTTAGTATATACTaGACGGTCTGTTCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRIVSIY*TVCSLQ
Trigger: CTGCAAAGAACAGACCGTTCAGTATATACTAACTAT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCTGCGAACTATCACTTaGAGAGACTGTTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLLRTIT*RDCSCF
Trigger: GAAACAGGAACAGTCTCTTCAAGTGATAGTTCGCAG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCAAAGCGGTACTCATTaGCCCGGAGCATCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDQSGTH*PGASAA
Trigger: TGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTGCCAGGAGCCATATTaGAAAAATCATTTGATACTG +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRCQEPY*KNHLIL
Trigger: CAGTATCAAATGATTTTTTCAATATGGCTCCTGGCA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTCTTTGACAGACTCCTaGAGGATATCAGACAGAACT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSLTDS*RISDRT
Trigger: AGTTCTGTCTGATATCCTTCAGGAGTCTGTCAAAGA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGTTGTTACTTTCTCTTTaGCAGACTCCTGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRLLLSL*QTPEGY
Trigger: ATATCCTTCAGGAGTCTGTCAAAGAGAAAGTAACAA...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp AACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTTGTTACTTTCTCTTTaGCAGACTCCTGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: NTPIMQFTPSASTQAKRYLLLSL*QTPEGY
Trigger: ATATCCTTCAGGAGTCTGTCAAAGAGAAAGTAACAA...GTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTTCAGAACTTTGCACTaGATCATAGCCAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALFRTLH*IIARAY
Trigger: ATATGCCCTGGCTATGATTCAGTGCAAAGTTCTGAA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAGATGCATGTGGTTCATaGCCAGCTGCTTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQDACGS*PAASHR
Trigger: TCGGTGGGAAGCAGCTGGTCATGAACCACATGCATC...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGAGGCCATGTTTGGAGTaGGAATCCTTTAATAACTAT +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRRPCLE*ESFNNY
Trigger: ATAGTTATTAAAGGATTCTCACTCCAAACATGGCCT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCTCCTTGGAAAATGGTaGATGGTCTCAAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLLLGKW*MVSKRG
Trigger: CCCTCTTTTTGAGACCATTCACCATTTTCCAAGGAG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520188.5
CDS-3UTR GCA 90 bp ATAGTCAAAGAAAATGCTAACACGCTGATGATTTTCCTGCAGCATATCATCCACGCAATTTACCCCATCTaGTTCCACCCAAGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: IVKENANTLMIFLQHIIHAIYPI*FHPSKA
Trigger: CGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGC...GTGGATGATATGCTGCAGGAAAATCATCAGCGTGTTAGCATTTTCTTTGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTCATCATCGTACTTCTaGTGTTCCAAGTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSSSYF*CSKFSN
Trigger: GTTGGAGAACTTGGAACAGCAGAAGTACGATGATGA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACTCCCACTACTGGTTCTaGATTGAGGCGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDSHYWF*IEAEGK
Trigger: CTTCCCCTCCGCCTCAATGCAGAACCAGTAGTGGGA...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp AGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTAACACGCTGATGATTCTGGCGATTCAACATTaGCAGAAAGTAGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: SVLATSCIVKENANTLMILAIQH*QKVGPR
Trigger: GCGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAG...AATCATCAGCGTGTTAGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGCCAGGGCATATTCTTaGCGAGTTTCTCTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLARAYS*RVSLSV
Trigger: AACTGAAAGAGAAACTCGCCAAGAATATGCCCTGGC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCAGTGCTCCCACTACTaGTTCTGCATTGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDQCSHY*FCIEAE
Trigger: CTCCGCCTCAATGCAGAACCAGTAGTGGGAGCACTG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp ATAGTCAAAGAAAATGCTAACACGCTGATGATTTTCCTGCAGCATATCATCCACATTCTTGCTGCCATATaGACAGTGAAGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: IVKENANTLMIFLQHIIHILAAI*TVKGSW
Trigger: CCAGGATCCCTTCACTGTTCATATGGCAGCAAGAAT...GTGGATGATATGCTGCAGGAAAATCATCAGCGTGTTAGCATTTTCTTTGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGACCACGCAGTTTCTGTaGACTCAGCTGAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLTTQFL*TQLSFY
Trigger: ATAAAAACTCAGCTGAGTTCACAGAAACTGCGTGGT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTCTTTGACAGACTCCTaGAGGATATCAGACAGAACT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLSLTDS*RISDRT
Trigger: AGTTCTGTCTGATATCCTTCAGGAGTCTGTCAAAGA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGACTGTATTCATCAAATaGACTAAGGTCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALTVFIK*TKVLDT
Trigger: AGTGTCCAGGACCTTAGTTCATTTGATGAATACAGT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGAGTAATTTAAGTCACTaGCTTCCATCAGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRSNLSH*LPSVLF
Trigger: GAAAAGAACTGATGGAAGGCAGTGACTTAAATTACT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp CAACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTAAGTAATTTAAGTCACTaGCTTCCATCAGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QHSHYAIYPICFHPSKAVSNLSH*LPSVLF
Trigger: GAAAAGAACTGATGGAAGGCAGTGACTTAAATTACT...TACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR GCA 90 bp ACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTAGTAATTTAAGTCACTaGCTTCCATCAGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TLPLCNLPHLLPPKQSGTSNLSH*LPSVLF
Trigger: GAAAAGAACTGATGGAAGGCAGTGACTTAAATTACT...AGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAATTTCTCAGATTTGTaGACAGGACTCCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALNFSDL*TGLHSN
Trigger: GTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAATGCACCATGAGCTTCTaGACGGCCAGCAGAGCATTA +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQCTMSF*TASRAL
Trigger: TAATGCTCTGCTGGCCGTGCAGAAGCTCATGGTGCA...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAATGAACTAAGGTCCTaGACACTCTCTCCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALNELRS*TLSPSF
Trigger: AAAACTTGGAGAGAGTGTCCAGGACCTTAGTTCATT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGTCTTTCAACAAATCTaGTTGAGGCCTGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALVFQQI*LRPGRK
Trigger: TTTTCTTCCAGGCCTCAACCAGATTTGTTGAAAGAC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTTGGAAAATGGTGAATaGTCTCAAAAAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALLENGE*SQKEGS
Trigger: AGAGCCCTCTTTTTGAGACCATTCACCATTTTCCAA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520188.5
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGGCTACAAGATTCATTaGTTTCCAACACCTACAGCT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLGYKIH*FPTPTA
Trigger: AGCTGTAGGTGTTGGAAACCAATGAATCTTGTAGCC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520188.5
3UTR CAA 72 bp AACCTCACAGCATTCTCTCTCCAAAATTTCTCAGATTaGTGCACAGGACTCCATTCCAACCTTCCAGATTTA +
Preference number: 4 (lower is better)
Translates to: NLTAFSLQNFSD*CTGLHSNLPDL
Trigger: TAAATCTGGAAGGTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTGGAGAGAGAATGCTGTGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGATAGTTAGTATATACTaGACGGTCTGTTCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALIVSIY*TVCSLQ
Trigger: CTGCAAAGAACAGACCGTTCAGTATATACTAACTAT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTGCCAGGAGCCATATTaGAAAAATCATTTGATACTG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALCQEPY*KNHLIL
Trigger: CAGTATCAAATGATTTTTTCAATATGGCTCCTGGCA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAAGGTGTTCACACATTTaGGGACTGAATGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQRCSHI*GLNARS
Trigger: GCTCCTGGCATTCAGTCCTCAAATGTGTGAACACCT...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGACTGTATTCATCAAATaGACTAAGGTCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLTVFIK*TKVLDT
Trigger: AGTGTCCAGGACCTTAGTTCATTTGATGAATACAGT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACACCTGCTGGTCTTCATaGTGCATGTGGTTCATGACC +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDTCWSS*CMWFMT
Trigger: GGTCATGAACCACATGCATCATGAAGACCAGCAGGT...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCTCTGTGAACTCAGCTaGGTTTTTATCCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALLCELS*VFIQLK
Trigger: TTTCAATTGGATAAAAACTCAGCTGAGTTCACAGAG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGAACGGTCTGTTCTTTaGAGATATGAGTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLERSVL*RYESSD
Trigger: ATCTGATGACTCATATCTGCAAAGAACAGACCGTTC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCTTGGCAATAATTCTTaGTGCCATATGAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALLGNNS*CHMNSE
Trigger: TTCACTGTTCATATGGCAGCAAGAATTATTGCCAAG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp CCACGCAGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTAACACGCTGCTTGGCAATAATTCTTaGTGCCATATGAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: PRSVLATSCIVKENANTLLGNNS*CHMNSE
Trigger: TTCACTGTTCATATGGCAGCAAGAATTATTGCCAAG...CAGCGTGTTAGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACTGCGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR GCA 90 bp GGCAATAATTCTTGCTGCCATATGAACAGTGAAGGGATCCTGGCGATTCAACATCTTGGCAATAATTCTTaGTGCCATATGAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: GNNSCCHMNSEGILAIQHLGNNS*CHMNSE
Trigger: TTCACTGTTCATATGGCAGCAAGAATTATTGCCAAG...ATGTTGAATCGCCAGGATCCCTTCACTGTTCATATGGCAGCAAGAATTATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACGCAATTTACCCCATCTaGTTCCACCCAAGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDAIYPI*FHPSKA
Trigger: CGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGC...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTCAACACTCCCATTATaGAATTTACCCCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLSTLPL*NLPHLL
Trigger: AAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGAATTTCTCAGATTTGTaGACAGGACTCCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLNFSDL*TGLHSN
Trigger: GTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAGGTATTCCCAGTTGTaGACCATGAGCTTCTGCACG +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDRYSQL*TMSFCT
Trigger: CGTGCAGAAGCTCATGGTGCACAACTGGGAATACCT...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACGACCCGTTTGCCTCGTaGATAATGCCGCACATATTC +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDDPFAS*IMPHIF
Trigger: GAATATGTGCGGCATTATCCACGAGGCAAACGGGTC...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGATAGTTAGTATATACTaGACGGTCTGTTCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLIVSIY*TVCSLQ
Trigger: CTGCAAAGAACAGACCGTTCAGTATATACTAACTAT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR TCA 90 bp TTTCTCTTTGACAGACTCCTGAAGGATATCAGACAGAACTGGAATGATATTATAATTCTTGCTGCCATATaGACAGTGAAGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: FLFDRLLKDIRQNWNDIIILAAI*TVKGSW
Trigger: CCAGGATCCCTTCACTGTTCATATGGCAGCAAGAAT...TATAATATCATTCCAGTTCTGTCTGATATCCTTCAGGAGTCTGTCAAAGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAACAGACAGAACTGGAATaGTATTATAGCGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQQTELE*YYSAAG
Trigger: ACCTGCGGCGCTATAATATCATTCCAGTTCTGTCTG...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCAGACAGAACTGGAATaGTATTATAGCGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDQTELE*YYSAAG
Trigger: ACCTGCGGCGCTATAATATCATTCCAGTTCTGTCTG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTTGTTACTTTCTCTTTaGCAGACTCCTGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLLLLSL*QTPEGY
Trigger: ATATCCTTCAGGAGTCTGTCAAAGAGAAAGTAACAA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp AGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTAACACGCTGATGATTGCCACGCAGTGTTCTTaGTACATCTTGCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: SVLATSCIVKENANTLMIATQCS*YILHSQ
Trigger: TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGC...AATCATCAGCGTGTTAGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR GCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGTAATTTAAGTCACTaGCTTCCATCAGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSNLSH*LPSVLF
Trigger: GAAAAGAACTGATGGAAGGCAGTGACTTAAATTACT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR GCA 90 bp TTGATATCTTCGCTGATATCTTCATCATCGTACTTCTGCTGTTCCAAGTTCTCCTCAACACTCCCATTATaGAATTTACCCCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: LISSLISSSSYFCCSKFSSTLPL*NLPHLL
Trigger: AAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGA...GGAGAACTTGGAACAGCAGAAGTACGATGATGAAGATATCAGCGAAGATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp ATAGTCAAAGAAAATGCTAACACGCTGATGATTTTCCTGCAGCATATCATCCACTCATCATCGTACTTCTaGTGTTCCAAGTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: IVKENANTLMIFLQHIIHSSSYF*CSKFSN
Trigger: GTTGGAGAACTTGGAACAGCAGAAGTACGATGATGA...GTGGATGATATGCTGCAGGAAAATCATCAGCGTGTTAGCATTTTCTTTGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCTCGGATATCCATTTTaGTCATCTAAACTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALLGYPF*SSKLRN
Trigger: ATTACGAAGTTTAGATGACCAAAATGGATATCCGAG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
CDS-3UTR CCA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGACAATTCTCCCAATTTaGTTTGAAAAGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALTILPI*FEKRQQ
Trigger: CTGTTGTCTCTTTTCAAACCAAATTGGGAGAATTGT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAACTGCGAACTATCACTTaGAGAGACTGTTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQLRTIT*RDCSCF
Trigger: GAAACAGGAACAGTCTCTTCAAGTGATAGTTCGCAG...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359530.7
CDS-3UTR TCA 90 bp AGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTAACACGCTGATGATTTCTTTGACAGACTCCTaGAGGATATCAGACAGAACT +
Preference number: 4 (lower is better)
Translates to: SVLATSCIVKENANTLMISLTDS*RISDRT
Trigger: AGTTCTGTCTGATATCCTTCAGGAGTCTGTCAAAGA...AATCATCAGCGTGTTAGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp TCTTGCATAGTCAAAGAAAATGCTAACACGCTGATGATTTTCCTGCAGCATATCACTGTATTCATCAAATaGACTAAGGTCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: SCIVKENANTLMIFLQHITVFIK*TKVLDT
Trigger: AGTGTCCAGGACCTTAGTTCATTTGATGAATACAGT...GATATGCTGCAGGAAAATCATCAGCGTGTTAGCATTTTCTTTGACTATGCAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAGTTTGCACGAACTTCTaGAGCCTTGGCAGCAATAAT +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQVCTNF*SLGSNN
Trigger: ATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAAC...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCCAGTTGACTTTGTTTaGACGAACTTCTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDPVDFV*TNFCSL
Trigger: AAGGCTGCAGAAGTTCGTGCAAACAAAGTCAACTGG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAACGCACTGCACATACTaGGAACTATCACTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQTHCTY*ELSLEE
Trigger: CTCTTCAAGTGATAGTTCGCAGTATGTGCAGTGCGT...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359530.7
CDS-3UTR CCA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCTCGGATATCCATTTTaGTCATCTAAACTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLLGYPF*SSKLRN
Trigger: ATTACGAAGTTTAGATGACCAAAATGGATATCCGAG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
CDS-3UTR CCA 90 bp AAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTCTCGGATATCCATTTTaGTCATCTAAACTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: KVGPRSVLATSCIVKENALGYPF*SSKLRN
Trigger: ATTACGAAGTTTAGATGACCAAAATGGATATCCGAG...AGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR CCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAGCCAGGGCATATTCTTaGCGAGTTTCTCTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQARAYS*RVSLSV
Trigger: AACTGAAAGAGAAACTCGCCAAGAATATGCCCTGGC...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACGATAGGATTGCCAGTTaGCTTTGTTTGCACGAACTT +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDDRIAS*LCLHEL
Trigger: AAGTTCGTGCAAACAAAGTCAACTGGCAATCCTATC...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAGATAGGATTGCCAGTTaGCTTTGTTTGCACGAACTT +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQDRIAS*LCLHEL
Trigger: AAGTTCGTGCAAACAAAGTCAACTGGCAATCCTATC...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAACCACGCAGTTTCTGTaGACTCAGCTGAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQTTQFL*TQLSFY
Trigger: ATAAAAACTCAGCTGAGTTCACAGAAACTGCGTGGT...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359530.7
CDS-3UTR TCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACTCTTTGACAGACTCCTaGAGGATATCAGACAGAACT +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDSLTDS*RISDRT
Trigger: AGTTCTGTCTGATATCCTTCAGGAGTCTGTCAAAGA...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp AGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTAACACGCTGATGATTGAACGGTCTGTTCTTTaGAGATATGAGTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: SVLATSCIVKENANTLMIERSVL*RYESSD
Trigger: ATCTGATGACTCATATCTGCAAAGAACAGACCGTTC...AATCATCAGCGTGTTAGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAATCATCATCGTACTTCTaGTGTTCCAAGTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQSSSYF*CSKFSN
Trigger: GTTGGAGAACTTGGAACAGCAGAAGTACGATGATGA...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
3UTR CAA 72 bp TCCTGGACACTCTCTCCAAGTTTTTCCAAAAGAAATTaGATATCTTCGCTGATATCTTCATCATCGTACTTC +
Preference number: 4 (lower is better)
Translates to: SWTLSPSFSKRN*ISSLISSSSYF
Trigger: GAAGTACGATGATGAAGATATCAGCGAAGATATCAAATTTCTTTTGGAAAAACTTGGAGAGAGTGTCCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR TCA 90 bp GCATTTCAGAATATATCTCCAGGCAATCCTTCCAAAAATCAATACAAAGCCCATTGCCAGGAGCCATATTaGAAAAATCATTTGATACTG +
Preference number: 4 (lower is better)
Translates to: AFQNISPGNPSKNQYKAHCQEPY*KNHLIL
Trigger: CAGTATCAAATGATTTTTTCAATATGGCTCCTGGCA...ATGGGCTTTGTATTGATTTTTGGAAGGATTGCCTGGAGATATATTCTGAAATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522849.1
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACGAACGGTCTGTTCTTTaGAGATATGAGTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDERSVL*RYESSD
Trigger: ATCTGATGACTCATATCTGCAAAGAACAGACCGTTC...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACTCAACACTCCCATTATaGAATTTACCCCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDSTLPL*NLPHLL
Trigger: AAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGA...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAAATTTCTCAGATTTGTaGACAGGACTCCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQNFSDL*TGLHSN
Trigger: GTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATT...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAATGAACTAAGGTCCTaGACACTCTCTCCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDNELRS*TLSPSF
Trigger: AAAACTTGGAGAGAGTGTCCAGGACCTTAGTTCATT...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACTGCCAGGAGCCATATTaGAAAAATCATTTGATACTG +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDCQEPY*KNHLIL
Trigger: CAGTATCAAATGATTTTTTCAATATGGCTCCTGGCA...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR TCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAATTGTTACTTTCTCTTTaGCAGACTCCTGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQLLLSL*QTPEGY
Trigger: ATATCCTTCAGGAGTCTGTCAAAGAGAAAGTAACAA...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCTTGGCAATAATTCTTaGTGCCATATGAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDLGNNS*CHMNSE
Trigger: TTCACTGTTCATATGGCAGCAAGAATTATTGCCAAG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR GCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAACTTGGCAATAATTCTTaGTGCCATATGAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQLGNNS*CHMNSE
Trigger: TTCACTGTTCATATGGCAGCAAGAATTATTGCCAAG...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCTCGGATATCCATTTTaGTCATCTAAACTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDLGYPF*SSKLRN
Trigger: ATTACGAAGTTTAGATGACCAAAATGGATATCCGAG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CCA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAACAATTCTCCCAATTTaGTTTGAAAAGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: FAIHYFATILPIWFEKRQTILPI*FEKRQQ
Trigger: CTGTTGTCTCTTTTCAAACCAAATTGGGAGAATTGT...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS GCA 90 bp GCGGAAGCCGGGAGACTCCAAAGCAGCAAGAGGAGGGGCGGGCGCTaGGGCGGGGCTTGTTCGGTGCGGACAACTGGATTCCCGAGTCCG +
Preference number: 5 (lower is better)
Translates to: AEAGRLQSSKRRGGR*GGACSVRTTGFPSP
Trigger: CGGACTCGGGAATCCAGTTGTCCGCACCGAACAAGCCCCGCCGCAGCGCCCGCCCCTCCTCTTGCTGCTTTGGAGTCTCCCGGCTTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS TCA 90 bp GGAAGCCAGGGCGGCCGCAGTAGAATGACAGAGGCGCCGGTCACGTaGTCGGAGGCACGTGACTGCTGCGGAAGGCGGAAGCCGGGAGAC +
Preference number: 5 (lower is better)
Translates to: GSQGGRSRMTEAPVT*SEARDCCGRRKPGD
Trigger: GTCTCCCGGCTTCCGCCTTCCGCAGCAGTCACGTGCCTCCGATCACGTGACCGGCGCCTCTGTCATTCTACTGCGGCCGCCCTGGCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS CCA 90 bp CAGAGCCAAGTAGGCGTCTCCTGTCAGGTCCAGAGGTCTGAGCAGTaGAGGGAGACTCCGGGAGCCGAAAGTGAAGCGGGTCCCGCACCA +
Preference number: 5 (lower is better)
Translates to: QSQVGVSCQVQRSEQ*RETPGAESEAGPAP
Trigger: TGGTGCGGGACCCGCTTCACTTTCGGCTCCCGGAGTCTCCCTCCACTGCTCAGACCTCTGGACCTGACAGGAGACGCCTACTTGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000519588.1
ENST00000521335.1
ENST00000524164.5
CDS-3UTR CAA 90 bp GGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTGCTTGCCAAGGTATTCCCAGTTGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GSGLGLLGLELLAKVFPVAKRYS*TRSISC
Trigger: GCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGC...AACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp GCAGGCTTAGCTTCGGGCGGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTGCTTTCCCTGAAGATAGGATaGCCAGTTGACTTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: AGLASGGSGLGLLGLELLSLKIG*PVDFVC
Trigger: GCAAACAAAGTCAACTGGCAATCCTATCTTCAGGGA...AAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCGAAGCTAAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp CCCGGAGCATCAGCTGCAAACACCCGGCCACGCACTGCACATACTGCGAACTCACCTGGCGATTCAACATaGGCAGAAAGTAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: PGASAANTRPRTAHTANSPGDST*AESRAT
Trigger: CGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGG...TGAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522849.1
CDS GCA 90 bp GCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTaGAAACACCCGGCCACGCACTGCACATACTGCGAACTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: ASTQAKRYSLTRSIS*KHPATHCTYCELCE
Trigger: TTCACAGAGTTCGCAGTATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR CAA 90 bp CTTGCCAAGGTATTCCCAGTTGTGCACCATGAGCTTCTGCACGGCCAGCAGAGCTCGGACTGGAGCTGCTaGCCAAGGTATTCCCAGTTG +
Preference number: 5 (lower is better)
Translates to: LAKVFPVVHHELLHGQQSSDWSC*PRYSQL
Trigger: CAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGA...GCTCTGCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATACCTTGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp ATCTGCTTCCACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGCAAGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ICFHPSKAVLIDPEHQLQAKRYS*TRSISC
Trigger: GCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGC...TTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS TCA 90 bp AACAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATTaGCCCGGAGCATCAGCTGCAAACACCCGGCCACGCACTGCACAT +
Preference number: 5 (lower is better)
Translates to: NNLPHLLPPKQSGTH*PGASAANTRPRTAH
Trigger: ATGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521900.5
CDS-3UTR CAA 90 bp ACTGTTCCTGTTTCAACAGCAACACCGCTACCACGCAGTTTCTGTGAACTCAGCCGCACCAAGGAGACGTaGAGGGCCGCACAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: TVPVSTATPLPRSFCELSRTKET*RAAQVE
Trigger: TTCTACCTGTGCGGCCCTCAACGTCTCCTTGGTGCG...GCTGAGTTCACAGAAACTGCGTGGTAGCGGTGTTGCTGTTGAAACAGGAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGCGCTGCGGCGGGGCTaGTTCGGTGCGGACAACTGG +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLALRRG*FGADNW
Trigger: CCAGTTGTCCGCACCGAACAAGCCCCGCCGCAGCGC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS CCA 90 bp AATGTCTTTCAACAAATCTGGTTGAGGCCTGGAAGAAAAGCAATCTaGCAACCGGGGGCCGAAGAACAGGAGAGGACCAAGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: NVFQQIWLRPGRKAI*QPGAEEQERTKRRD
Trigger: GTCTCGCCGCTTGGTCCTCTCCTGTTCTTCGGCCCCCGGTTGCCAGATTGCTTTTCTTCCAGGCCTCAACCAGATTTGTTGAAAGACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCGCACCAAGGAGACGTaGAGGGCCGCACAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRRTKET*RAAQVE
Trigger: TTCTACCTGTGCGGCCCTCAACGTCTCCTTGGTGCG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRAKRYS*TRSISC
Trigger: GCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp CACCCAAGCAAAGCGGTACTCATTGACCCGGAGCATCAGCTGCAAACACCCGGCCAAAATTTCTCAGATTaGTGCACAGGACTCCATTCC +
Preference number: 5 (lower is better)
Translates to: HPSKAVLIDPEHQLQTPGQNFSD*CTGLHS
Trigger: GGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTG...GCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGACTACTGGTTCTGCATaGAGGCGGAGGGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRTTGSA*RRRGRP
Trigger: TGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAGT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCCTGGCGATTCAACATaGGCAGAAAGTAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRPGDST*AESRAT
Trigger: CGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTACTACTGGTTCTGCATaGAGGCGGAGGGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: STLAESRATQCSCYILHSTTGSA*RRRGRP
Trigger: TGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAGT...ACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALAKRYS*TRSISC
Trigger: GCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCCAAGGTATTCCCAGTaGTGCACCATGAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRPRYSQ*CTMSFC
Trigger: GCAGAAGCTCATGGTGCACAACTGGGAATACCTTGG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGACTACTGGTTCTGCATaGAGGCGGAGGGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALTTGSA*RRRGRP
Trigger: TGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAGT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS GCA 90 bp TCCCTGAAGATAGGATTGCCAGTTGACTTTGTTTGCACGAACTTCTaGAGCCTTGGCAGCAATAATATTGGTGGGGACAGCAGCATCCAC +
Preference number: 5 (lower is better)
Translates to: SLKIGLPVDFVCTNF*SLGSNNIGGDSSIH
Trigger: GTGGATGCTGCTGTCCCCACCAATATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAACAAAGTCAACTGGCAATCCTATCTTCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000521275.5
ENST00000521335.1
ENST00000524164.5
ENST00000524234.1
CDS-3UTR CAA 90 bp GCGATTCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCCGAACTTCTGCAGCCTaGGCAGCAATAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: AIQHWQKVGPRSVLATSCRTSAA*AAIILV
Trigger: CACCAATATTATTGCTGCCAAGGCTGCAGAAGTTCG...GCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp TGTTACTCAACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAACCTGGCGATTCAACATaGGCAGAAAGTAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: CYSTLPLCNLPHLLPPKQPGDST*AESRAT
Trigger: CGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGG...TTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGTTGAGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522849.1
ENST00000524164.5
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLAKRYS*TRSISC
Trigger: GCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGC...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCAGGTGTTCACACATTaGAGGACTGAATGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRQVFTH*RTECQE
Trigger: CTCCTGGCATTCAGTCCTCAAATGTGTGAACACCTG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp GGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTAACACGCCAAGGTATTCCCAGTaGTGCACCATGAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GPRSVLATSCIVKENANTPRYSQ*CTMSFC
Trigger: GCAGAAGCTCATGGTGCACAACTGGGAATACCTTGG...CGTGTTAGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTCGGACTGGAGCTGCTaGCCAAGGTATTCCCAGTTG +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSDWSC*PRYSQL
Trigger: CAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TCTTGCATAGTCAAAGAAAATGCTAACACGCTGATGATTTTCCTGCAGCATATCCGCACCAAGGAGACGTaGAGGGCCGCACAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: SCIVKENANTLMIFLQHIRTKET*RAAQVE
Trigger: TTCTACCTGTGCGGCCCTCAACGTCTCCTTGGTGCG...GATATGCTGCAGGAAAATCATCAGCGTGTTAGCATTTTCTTTGACTATGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCGAACTTCTGCAGCCTaGGCAGCAATAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRRTSAA*AAIILV
Trigger: CACCAATATTATTGCTGCCAAGGCTGCAGAAGTTCG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
CDS-3UTR CAA 90 bp GCGATTCAACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCGATTGCCAGTTGACTTaGTTTGCACGAACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: AIQHWQKVGPRSVLATSCDCQLT*FARTSA
Trigger: TGCAGAAGTTCGTGCAAACAAAGTCAACTGGCAATC...GCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGTTGAATCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGAGTTTGAAGCATCTCTaGCTTCTCTTCAGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRSLKHL*LLFRAS
Trigger: CGAAGCCCTGAAGAGAAGCAAGAGATGCTTCAAACT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCCTGGCGATTCAACATaGGCAGAAAGTAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLPGDST*AESRAT
Trigger: CGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTCGGACTGGAGCTGCTaGCCAAGGTATTCCCAGTTG +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLSDWSC*PRYSQL
Trigger: CAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAATCCCGAGTCCGTAACTaGGGCCCCGGAGCGACGCAA +
Preference number: 5 (lower is better)
Translates to: FAIHYFATILPIWFEKRQSRVRN*GPGATQ
Trigger: TTGCGTCGCTCCGGGGCCCAAGTTACGGACTCGGGA...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS-3UTR CAA 90 bp ACATACTGCGAACTATCACTTGAAGAGACTGTTCCTGTTTCAACAGCAACACCGCAGGTGTTCACACATTaGAGGACTGAATGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TYCELSLEETVPVSTATPQVFTH*RTECQE
Trigger: CTCCTGGCATTCAGTCCTCAAATGTGTGAACACCTG...CGGTGTTGCTGTTGAAACAGGAACAGTCTCTTCAAGTGATAGTTCGCAGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCCAAGGTATTCCCAGTaGTGCACCATGAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLPRYSQ*CTMSFC
Trigger: GCAGAAGCTCATGGTGCACAACTGGGAATACCTTGG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS GCA 90 bp AGAAATCATCTGTCCCTGAAGATAGGATTGCCAGTTGACTTTGTTTaGACGAACTTCTGCAGCCTTGGCAGCAATAATATTGGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: RNHLSLKIGLPVDFV*TNFCSLGSNNIGGD
Trigger: GTCCCCACCAATATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAACAAAGTCAACTGGCAATCCTATCTTCAGGGACAGATGATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000521275.5
ENST00000521335.1
ENST00000524164.5
ENST00000524234.1
CDS-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAACGCACCAAGGAGACGTaGAGGGCCGCACAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: FAIHYFATILPIWFEKRQRTKET*RAAQVE
Trigger: TTCTACCTGTGCGGCCCTCAACGTCTCCTTGGTGCG...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGTTTGAAGCATCTCTaGCTTCTCTTCAGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSLKHL*LLFRAS
Trigger: CGAAGCCCTGAAGAGAAGCAAGAGATGCTTCAAACT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGACTGCGAACTATCACTaGAAGAGACTGTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRTANYH*KRLFLF
Trigger: AAACAGGAACAGTCTCTTCAAGTGATAGTTCGCAGT...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCAGGTGTTCACACATTaGAGGACTGAATGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLQVFTH*RTECQE
Trigger: CTCCTGGCATTCAGTCCTCAAATGTGTGAACACCTG...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGCCAGGGCATATTCTaGGCGAGTTTCTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSQGIF*ASFSFS
Trigger: ACTGAAAGAGAAACTCGCCAAGAATATGCCCTGGCT...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGCAAAATTTCTCAGATTaGTGCACAGGACTCCATTCC +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRRQNFSD*CTGLHS
Trigger: GGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTG...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCGGCTACAAGATTCATaGGTTTCCAACACCTACAGC +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALRLQDS*VSNTYS
Trigger: GCTGTAGGTGTTGGAAACCAATGAATCTTGTAGCCG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520188.5
CDS TCA 90 bp CAAGTGTTGAACAGCTCGTGTAATTTACTGAATACTGTGATCACTTaGAGAGACTGTTCCTGTTTCAACAGCAACACCGCTACCACGCAG +
Preference number: 5 (lower is better)
Translates to: QVLNSSCNLLNTVIT*RDCSCFNSNTATTQ
Trigger: CTGCGTGGTAGCGGTGTTGCTGTTGAAACAGGAACAGTCTCTTCAAGTGATCACAGTATTCAGTAAATTACACGAGCTGTTCAACACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522849.1
CDS CCA 90 bp AAGAAACCAAATGAAATGAATGGCTTTCTCTTACCGTTTGCCTCGTaGATAATGCCGCACATATTCTCCAACATCGTGAGCAGCAACAGC +
Preference number: 5 (lower is better)
Translates to: KKPNEMNGFLLPFAS*IMPHIFSNIVSSNS
Trigger: GCTGTTGCTGCTCACGATGTTGGAGAATATGTGCGGCATTATCCACGAGGCAAACGGTAAGAGAAAGCCATTCATTTCATTTGGTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521707.1
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGGATTGCCAGTTGACTTaGTTTGCACGAACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALDCQLT*FARTSA
Trigger: TGCAGAAGTTCGTGCAAACAAAGTCAACTGGCAATC...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTCCCTGAAGATAGGATaGCCAGTTGACTTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALSLKIG*PVDFVC
Trigger: GCAAACAAAGTCAACTGGCAATCCTATCTTCAGGGA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
CDS-3UTR CAA 90 bp AGTGTTCTTGCTACATCTTGCATAGTCAAAGAAAATGCTAACACGCTGATGATTCCTGGCGATTCAACATaGGCAGAAAGTAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: SVLATSCIVKENANTLMIPGDST*AESRAT
Trigger: CGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGG...AATCATCAGCGTGTTAGCATTTTCTTTGACTATGCAAGATGTAGCAAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519588.1
ENST00000524164.5
CDS-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FAIHYFATILPIWFEKRQAKRYS*TRSISC
Trigger: GCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGC...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGAGCCAGGGCATATTCTaGGCGAGTTTCTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLSQGIF*ASFSFS
Trigger: ACTGAAAGAGAAACTCGCCAAGAATATGCCCTGGCT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp CATTCTCTCTCCAAAATTTCTCAGATTTGTGCACAGGACTCCATTCCAACCTTCAGCCAGGGCATATTCTaGGCGAGTTTCTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: HSLSKISQICAQDSIPTFSQGIF*ASFSFS
Trigger: ACTGAAAGAGAAACTCGCCAAGAATATGCCCTGGCT...GAAGGTTGGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTGGAGAGAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp CAACACTCCCATTATGCAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTAGAATACTGTGATCACTaGAAGAGACTGTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: QHSHYAIYPICFHPSKAVEYCDH*KRLFLF
Trigger: AAACAGGAACAGTCTCTTCAAGTGATCACAGTATTC...TACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGCATAATGGGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522849.1
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTCCCTGAAGATAGGATaGCCAGTTGACTTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLSLKIG*PVDFVC
Trigger: GCAAACAAAGTCAACTGGCAATCCTATCTTCAGGGA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
CDS-3UTR CAA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCCTGGCGATTCAACATaGGCAGAAAGTAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDPGDST*AESRAT
Trigger: CGTGGCCCTACTTTCTGCCAATGTTGAATCGCCAGG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGCAAAATTTCTCAGATTaGTGCACAGGACTCCATTCC +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALQNFSD*CTGLHS
Trigger: GGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTG...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACTCGGACTGGAGCTGCTaGCCAAGGTATTCCCAGTTG +
Preference number: 5 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDSDWSC*PRYSQL
Trigger: CAACTGGGAATACCTTGGCAAGCAGCTCCAGTCCGA...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGAGGCGGGAAAAGAGACAACAGTaGACTTTTGTTCAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: FTLNSKHSAPTTGSALRREKRQQ*TFVQSP
Trigger: TGGACTTTGAACAAAAGTCAACTGTTGTCTCTTTTC...CCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTTTCAACAAATCTGGTaGAGGCCTGGAAGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALFQQIW*RPGRKA
Trigger: TGCTTTTCTTCCAGGCCTCAACCAGATTTGTTGAAA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS-3UTR CAA 90 bp ACATTGGCAGAAAGTAGGGCCACGCAGTGTTCTTGCTACATCTTGCATAGTCAAAGTTTGAAGCATCTCTaGGCAGCAATAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: TLAESRATQCSCYILHSQSLKHL*AAIILV
Trigger: CACCAATATTATTGCTGCCAAGAGATGCTTCAAACT...TTGACTATGCAAGATGTAGCAAGAACACTGCGTGGCCCTACTTTCTGCCAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519588.1
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGACTGCGAACTATCACTaGAAGAGACTGTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLTANYH*KRLFLF
Trigger: AAACAGGAACAGTCTCTTCAAGTGATAGTTCGCAGT...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359530.7
ENST00000396774.6
ENST00000520188.5
CDS-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAACCAAGGTATTCCCAGTaGTGCACCATGAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FAIHYFATILPIWFEKRQPRYSQ*CTMSFC
Trigger: GCAGAAGCTCATGGTGCACAACTGGGAATACCTTGG...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAATTGGCAGCAATAATATaGGTGGGGACAGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: FAIHYFATILPIWFEKRQLAAII*VGTAAS
Trigger: GGATGCTGCTGTCCCCACCAATATTATTGCTGCCAA...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp TTGATATCTTCGCTGATATCTTCATCATCGTACTTCTGCTGTTCCAAGTTCTCCACTGCGAACTATCACTaGAAGAGACTGTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: LISSLISSSSYFCCSKFSTANYH*KRLFLF
Trigger: AAACAGGAACAGTCTCTTCAAGTGATAGTTCGCAGT...GGAGAACTTGGAACAGCAGAAGTACGATGATGAAGATATCAGCGAAGATATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524164.5
CDS-3UTR CAA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACCAGGTGTTCACACATTaGAGGACTGAATGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDQVFTH*RTECQE
Trigger: CTCCTGGCATTCAGTCCTCAAATGTGTGAACACCTG...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp ACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATTGTTGCCATTCACTACTTaGCAACAATTCTCCCAATTT +
Preference number: 5 (lower is better)
Translates to: TVFTLNSKHSAPTTGSALLPFTT*QQFSQF
Trigger: AAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAA...CAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAACGAACTTCTGCAGCCTaGGCAGCAATAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: FAIHYFATILPIWFEKRQRTSAA*AAIILV
Trigger: CACCAATATTATTGCTGCCAAGGCTGCAGAAGTTCG...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAAGTTTGAAGCATCTCTaGCTTCTCTTCAGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: FAIHYFATILPIWFEKRQSLKHL*LLFRAS
Trigger: CGAAGCCCTGAAGAGAAGCAAGAGATGCTTCAAACT...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp ATCAAACAGTGTTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGTTGCCATTCACTACTTaGCAACAATTCTCCCAATTT +
Preference number: 5 (lower is better)
Translates to: IKQCSLLTLNTVLPLLVLLPFTT*QQFSQF
Trigger: AAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAA...CAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAACACTGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAAGATTGCCAGTTGACTTaGTTTGCACGAACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: FAIHYFATILPIWFEKRQDCQLT*FARTSA
Trigger: TGCAGAAGTTCGTGCAAACAAAGTCAACTGGCAATC...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp TATTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACTCCCTGAAGATAGGATaGCCAGTTGACTTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: YLPFTTLQQFSQFGLKRDSLKIG*PVDFVC
Trigger: GCAAACAAAGTCAACTGGCAATCCTATCTTCAGGGA...GTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS-3UTR CAA 90 bp TTTGCCATTCACTACTTTGCAACAATTCTCCCAATTTGGTTTGAAAAGAGACAACAAAATTTCTCAGATTaGTGCACAGGACTCCATTCC +
Preference number: 5 (lower is better)
Translates to: FAIHYFATILPIWFEKRQQNFSD*CTGLHS
Trigger: GGAATGGAGTCCTGTGCACAAATCTGAGAAATTTTG...TTGTCTCTTTTCAAACCAAATTGGGAGAATTGTTGCAAAGTAGTGAATGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355221.7
ENST00000359530.7
CDS CCA 72 bp GGAGGGTGGTCCGGGGCGCCGGGGACACAGCCGGGCTaGGGCGCCGCGTCAGAGCCAAGTAGGCGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: GGWSGAPGTQPG*GAASEPSRRLL
Trigger: CAGGAGACGCCTACTTGGCTCTGACGCGGCGCCCCAGCCCGGCTGTGTCCCCGGCGCCCCGGACCACCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000519588.1
ENST00000521335.1
ENST00000524164.5
CDS CCA 72 bp CGGGCGCTGCGGCGGGGCTTGTTCGGTGCGGACAACTaGATTCCCGAGTCCGTAACTTGGGCCCCGGAGCGA +
Preference number: 6 (lower is better)
Translates to: RALRRGLFGADN*IPESVTWAPER
Trigger: TCGCTCCGGGGCCCAAGTTACGGACTCGGGAATCCAGTTGTCCGCACCGAACAAGCCCCGCCGCAGCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS CCA 72 bp TTCGGTGCGGACAACTGGATTCCCGAGTCCGTAACTTaGGCCCCGGAGCGACGCAAGGGTCGGGCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: FGADNWIPESVT*APERRKGRAPA
Trigger: GGCTGGGGCCCGACCCTTGCGTCGCTCCGGGGCCCAAGTTACGGACTCGGGAATCCAGTTGTCCGCACCGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS CAA 72 bp GTTCGGTGCGGACAACTGGATTCCCGAGTCCGTAACTaGGGCCCCGGAGCGACGCAAGGGTCGGGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: VRCGQLDSRVRN*GPGATQGSGPS
Trigger: GCTGGGGCCCGACCCTTGCGTCGCTCCGGGGCCCAAGTTACGGACTCGGGAATCCAGTTGTCCGCACCGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS TCA 72 bp GGCGGCCGCAGTAGAATGACAGAGGCGCCGGTCACGTaGTCGGAGGCACGTGACTGCTGCGGAAGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: GGRSRMTEAPVT*SEARDCCGRRK
Trigger: CTTCCGCCTTCCGCAGCAGTCACGTGCCTCCGATCACGTGACCGGCGCCTCTGTCATTCTACTGCGGCCGCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS GCA 72 bp GGGAGACTCCAAAGCAGCAAGAGGAGGGGCGGGCGCTaGGGCGGGGCTTGTTCGGTGCGGACAACTGGATTC +
Preference number: 6 (lower is better)
Translates to: GRLQSSKRRGGR*GGACSVRTTGF
Trigger: GAATCCAGTTGTCCGCACCGAACAAGCCCCGCCGCAGCGCCCGCCCCTCCTCTTGCTGCTTTGGAGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS TCA 72 bp AATGACAGAGGCGCCGGTCACGTGATCGGAGGCACGTaGCTGCTGCGGAAGGCGGAAGCCGGGAGACTCCAA +
Preference number: 6 (lower is better)
Translates to: NDRGAGHVIGGT*LLRKAEAGRLQ
Trigger: TTGGAGTCTCCCGGCTTCCGCCTTCCGCAGCAGTCACGTGCCTCCGATCACGTGACCGGCGCCTCTGTCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355221.7
CDS CCA 72 bp GTAGGCGTCTCCTGTCAGGTCCAGAGGTCTGAGCAGTaGAGGGAGACTCCGGGAGCCGAAAGTGAAGCGGGT +
Preference number: 6 (lower is better)
Translates to: VGVSCQVQRSEQ*RETPGAESEAG
Trigger: ACCCGCTTCACTTTCGGCTCCCGGAGTCTCCCTCCACTGCTCAGACCTCTGGACCTGACAGGAGACGCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000519588.1
ENST00000521335.1
ENST00000524164.5
CDS TCA 72 bp AGAAACTGCAAGAGTCGCCTGACCTGGTCTGCAGCCTaGGACCAAACAACGCGAGGGCGGCCTTACCTCGCG +
Preference number: 6 (lower is better)
Translates to: RNCKSRLTWSAA*DQTTRGRPYLA
Trigger: CGCGAGGTAAGGCCGCCCTCGCGTTGTTTGGTCTCAGGCTGCAGACCAGGTCAGGCGACTCTTGCAGTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS GCA 72 bp CGGGCGGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTaGTTGCCAAGGTATTCCACGAAATGCTGCAAGAAT +
Preference number: 6 (lower is better)
Translates to: RAAAVWGCSDWS*LPRYSTKCCKN
Trigger: ATTCTTGCAGCATTTCGTGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523343.1
CDS GCA 72 bp AAGCTGGAGAAACTGCAAGAGTCGCCTGACCTGGTCTaGAGCCTGAGACCAAACAACGCGAGGGCGGCCTTA +
Preference number: 6 (lower is better)
Translates to: KLEKLQESPDLV*SLRPNNARAAL
Trigger: TAAGGCCGCCCTCGCGTTGTTTGGTCTCAGGCTGCAGACCAGGTCAGGCGACTCTTGCAGTTTCTCCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS GCA 72 bp CGGGCGGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTaGTTGCCAAGGTATTCCAAAAGTCAGTGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: RAAAVWGCSDWS*LPRYSKSQCFF
Trigger: AAAGAAACACTGACTTTTGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522159.5
CDS CAA 72 bp GCGGCAGCGGTCTGGGGCTGCTCGGACTGGAGCTGCTaGCCAAGGTATTCCACGAAATGCTGCAAGAATGAT +
Preference number: 6 (lower is better)
Translates to: AAAVWGCSDWSC*PRYSTKCCKND
Trigger: ATCATTCTTGCAGCATTTCGTGGAATACCTTGGCAAGCAGCTCCAGTCCGAGCAGCCCCAGACCGCTGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523343.1
CDS CAA 90 bp TTCACTCTTAACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATaGAGGCGGAGGGGAAGGCCAGAGGCAGGCTTAGCTTCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: FTLNSKHSAPTTGSA*RRRGRPEAGLASGG
Trigger: GCCGCCCGAAGCTAAGCCTGCCTCTGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTTAAGAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000518072.1
ENST00000520188.5
ENST00000522159.5
ENST00000523343.1
ENST00000523899.5
CDS CAA 90 bp GAACAATTTACCCCATCTGCTTCCACCCAAGCAAAGCGGTACTCATaGACCCGGAGCATCAGCTGCAAACACCCGGCCACGCACTGCACA +
Preference number: 6 (lower is better)
Translates to: EQFTPSASTQAKRYS*TRSISCKHPATHCT
Trigger: TGTGCAGTGCGTGGCCGGGTGTTTGCAGCTGATGCTCCGGGTCAATGAGTACCGCTTTGCTTGGGTGGAAGCAGATGGGGTAAATTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521900.5
CDS CAA 72 bp AACTCTAAACACAGTGCTCCCACTACTGGTTCTGCATaGAGGCGGAGGGGAAGGCCAGAGGCAGGCTTAGCT +
Preference number: 6 (lower is better)
Translates to: NSKHSAPTTGSA*RRRGRPEAGLA
Trigger: AGCTAAGCCTGCCTCTGGCCTTCCCCTCCGCCTCAATGCAGAACCAGTAGTGGGAGCACTGTGTTTAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000518072.1
ENST00000520188.5
ENST00000522159.5
ENST00000523343.1
ENST00000523899.5
CDS GCA 72 bp TCCACTCTCCTGCCCGCCCCTGACGTTTCTTCCCCCTaGGAGAAAGGCTCCAGAATTTCGCTTAATAAACCT +
Preference number: 6 (lower is better)
Translates to: STLLPAPDVSSP*EKGSRISLNKP
Trigger: AGGTTTATTAAGCGAAATTCTGGAGCCTTTCTCGCAGGGGGAAGAAACGTCAGGGGCGGGCAGGAGAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524234.1
CDS CCA 72 bp CAACAAATCTGGTTGAGGCCTGGAAGAAAAGCAATCTaGCAACCGGGGGCCGAAGAACAGGAGAGGACCAAG +
Preference number: 6 (lower is better)
Translates to: QQIWLRPGRKAI*QPGAEEQERTK
Trigger: CTTGGTCCTCTCCTGTTCTTCGGCCCCCGGTTGCCAGATTGCTTTTCTTCCAGGCCTCAACCAGATTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396774.6
CDS CAA 72 bp TGCCAGTTGACTTTGTTTGCACGAACTTCTGCAGCCTaGGCAGCAATAATATTGGTGGGGACAGCAGCATCC +
Preference number: 6 (lower is better)
Translates to: CQLTLFARTSAA*AAIILVGTAAS
Trigger: GGATGCTGCTGTCCCCACCAATATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAACAAAGTCAACTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000521275.5
ENST00000521335.1
ENST00000524164.5
ENST00000524234.1
CDS CAA 90 bp TTGACTTTGTTTGCACGAACTTCTGCAGCCTTGGCAGCAATAATATaGGTGGGGACAGCAGCATCCACAGCACCTCGGATATCCATTTTG +
Preference number: 6 (lower is better)
Translates to: LTLFARTSAALAAII*VGTAASTAPRISIL
Trigger: CAAAATGGATATCCGAGGTGCTGTGGATGCTGCTGTCCCCACCAATATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAACAAAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000521275.5
ENST00000521335.1
ENST00000524164.5
ENST00000524234.1
CDS TCA 72 bp CAGAAATCATCTGTCCCTGAAGATAGGATTGCCAGTTaGCTTTGTTTGCACGAACTTCTGCAGCCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: QKSSVPEDRIAS*LCLHELLQPWQ
Trigger: CTGCCAAGGCTGCAGAAGTTCGTGCAAACAAAGTCAACTGGCAATCCTATCTTCAGGGACAGATGATTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000521275.5
ENST00000521335.1
ENST00000524164.5
ENST00000524234.1
CDS GCA 72 bp ATAGGATTGCCAGTTGACTTTGTTTGCACGAACTTCTaGAGCCTTGGCAGCAATAATATTGGTGGGGACAGC +
Preference number: 6 (lower is better)
Translates to: IGLPVDFVCTNF*SLGSNNIGGDS
Trigger: GCTGTCCCCACCAATATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAACAAAGTCAACTGGCAATCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000521275.5
ENST00000521335.1
ENST00000524164.5
ENST00000524234.1
CDS GCA 72 bp CTGTCCCTGAAGATAGGATTGCCAGTTGACTTTGTTTaGACGAACTTCTGCAGCCTTGGCAGCAATAATATT +
Preference number: 6 (lower is better)
Translates to: LSLKIGLPVDFV*TNFCSLGSNNI
Trigger: AATATTATTGCTGCCAAGGCTGCAGAAGTTCGTGCAAACAAAGTCAACTGGCAATCCTATCTTCAGGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000396774.6
ENST00000521275.5
ENST00000521335.1
ENST00000524164.5
ENST00000524234.1
CDS CCA 72 bp AATGAAATGAATGGCTTTCTCTTACCGTTTGCCTCGTaGATAATGCCGCACATATTCTCCAACATCGTGAGC +
Preference number: 6 (lower is better)
Translates to: NEMNGFLLPFAS*IMPHIFSNIVS
Trigger: GCTCACGATGTTGGAGAATATGTGCGGCATTATCCACGAGGCAAACGGTAAGAGAAAGCCATTCATTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521707.1
CDS CAA 72 bp TCGGATATCCATTTTGGTCATCTAAACTTCGTAATCTaGAATGTCTTTCAACAAATCTCGCGAATCCTCGGG +
Preference number: 6 (lower is better)
Translates to: SDIHFGHLNFVI*NVFQQISRILG
Trigger: CCCGAGGATTCGCGAGATTTGTTGAAAGACATTCAAGATTACGAAGTTTAGATGACCAAAATGGATATCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355221.7
ENST00000359530.7
ENST00000519588.1
ENST00000521335.1
ENST00000524164.5
CDS CAA 72 bp TCGGATATCCATTTTGGTCATCTAAACTTCGTAATCTaGAATGTCTTTCAACAAATCAGGCAAGCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: SDIHFGHLNFVI*NVFQQIRQAGE
Trigger: TTCTCCAGCTTGCCTGATTTGTTGAAAGACATTCAAGATTACGAAGTTTAGATGACCAAAATGGATATCCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521275.5