Pregenerated sensors for ATP6V1G1 (Homo sapiens)
Ensembl gene IDs: ENSG00000136888Ensembl transcript IDs: ENST00000374050.4, ENST00000473413.1, ENST00000677115.1, ENST00000677498.1, ENST00000677543.1, ENST00000678234.1, ENST00000679150.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAAGTGAAGTTCTGCAGACCATCTGGGTCAAAATGCATTTCGCATaGTCAAAAATGAAGAACCACTGGTTGTCACGGAGACAGGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: LSEVLQTIWVKMHFA*SKMKNHWLSRRQGK Trigger: TTTTCCCTGTCTCCGTGACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATGGTCTGCAGAACTTCACTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000374050.4 ENST00000678234.1 |
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| 3UTR GCA 90 bp | TCTGTGAGGCCCTTATCCATCCTTTCCCCTTTCCACAATTGTCCCTaGCTCCTCTATGCTTTCTGTGATCTGTTTTTGTACTATTATTGT | + |
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Preference number: 1 (lower is better) Translates to: SVRPLSILSPFHNCP*LLYAFCDLFLYYYC Trigger: ACAATAATAGTACAAAAACAGATCACAGAAAGCATAGAGGAGGCAGGGACAATTGTGGAAAGGGGAAAGGATGGATAAGGGCCTCACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR-3UTR CCA 90 bp | GAGGTATGTGCCTTTACTCACTGGACTTGGGCCTGGAAGTGTGTATGCTGGAACAGTCTCCCTGACCACTaGATGGTAAGCTACACTCCA | + |
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Preference number: 2 (lower is better) Translates to: EVCAFTHWTWAWKCVCWNSLPDH*MVSYTP Trigger: TGGAGTGTAGCTTACCATCCAGTGGTCAGGGAGACT...GTTCCAGCATACACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACATACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR-3UTR TCA 90 bp | TGCATGATTTGCACTGTATTACTGAGTCTCCCTGACCACTGGATGGTAAGCTACCTATGCTGGATATTCTaGAAGCCTTGGCGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: CMICTVLLSLPDHWMVSYLCWIF*KPWRDR Trigger: CCTGTCCCGCCAAGGCTTTCAGAATATCCAGCATAG...GTAGCTTACCATCCAGTGGTCAGGGAGACTCAGTAATACAGTGCAAATCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR-3UTR TCA 90 bp | TCACTGGACTTGGGCCTGGAAGTGTGTATGCTGGAACTACTAGAGGCCACAGTGAAGTGGGGCTCCATTTaGTTTATGTTTATGACCGTC | + |
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Preference number: 2 (lower is better) Translates to: SLDLGLEVCMLELLEATVKWGSI*FMFMTV Trigger: GACGGTCATAAACATAAATCAAATGGAGCCCCACTT...CACTGTGGCCTCTAGTAGTTCCAGCATACACACTTCCAGGCCCAAGTCCAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGGAGGTATGTGCCTTTACTCACTGGACTTGGGCCTGGAAGTGTGTATGTTCCACAATTGTCCCTaGCTCCTCTATGCTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: KEGGMCLYSLDLGLEVCMFHNCP*LLYAFC Trigger: ACAGAAAGCATAGAGGAGGCAGGGACAATTGTGGAA...CATACACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACATACCTCCCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGAGGTATGTGCCTTTACTCACTGGACTTGGGCCTGGAAGTGTGTATGCTGGTGAGAGAAAGTCCTaGGCATATTATTTAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GGRYVPLLTGLGPGSVYAGERKS*AYYLSS Trigger: AGAGCTTAAATAATATGCTCAGGACTTTCTCTCACC...AGCATACACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACATACCTCCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR-3UTR TCA 90 bp | ATTTGCACTGTATTACTGAGTCTCCCTGACCACTGGATGGTAAGCTACACTCCATTCGACCAGGATCTCTaGGCTATGCTGGATATTCTG | + |
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Preference number: 2 (lower is better) Translates to: ICTVLLSLPDHWMVSYTPFDQDL*AMLDIL Trigger: CAGAATATCCAGCATAGCTCAGAGATCCTGGTCGAA...TGGAGTGTAGCTTACCATCCAGTGGTCAGGGAGACTCAGTAATACAGTGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR CAA 90 bp | AATGCACATCATCTAGCCCACCAGGAAGGAAATATGCTTAATAACTaGCCCCAGGCTGTCCCAGGACAAGGATCTCTAGAGAAAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: NAHHLAHQEGNMLNN*PQAVPGQGSLEKRQ Trigger: TTGTCTTTTCTCTAGAGATCCTTGTCCTGGGACAGCCTGGGGCAAGTTATTAAGCATATTTCCTTCCTGGTGGGCTAGATGATGTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| 3UTR-3UTR GCA 90 bp | CAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCACGGAGACAATATGCTTAATAACTTaGCCCAGGCTGTCCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QNAFRMIKNEEPLVVTETICLIT*PRLSQD Trigger: GTCCTGGGACAGCCTGGGGCAAGTTATTAAGCATAT...TGTCTCCGTGACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCACTCCACAGCACAGGTaGTTCTCTCTTCTATCCATT | + |
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Preference number: 2 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVTPQHR*FSLLSI Trigger: AATGGATAGAAGAGAGAAGCACCTGTGCTGTGGAGT...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000678234.1 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCACGGAGACAAAAATGAAGAACCACTaGTTGTCACGGAGACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QNAFRMIKNEEPLVVTETKMKNH*LSRRQG Trigger: TCCCTGTCTCCGTGACAACCAGTGGTTCTTCATTTT...TGTCTCCGTGACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000374050.4 ENST00000678234.1 |
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| 3UTR-3UTR CCA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCGTTCTGCAGACCATCTaGGTCAAAATGCATTTCGCA | + |
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Preference number: 2 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVVLQTI*VKMHFA Trigger: TGCGAAATGCATTTTGACCCAGATGGTCTGCAGAAC...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000374050.4 ENST00000678234.1 |
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| 3UTR-3UTR CCA 90 bp | ACTAAAGTGGGGCTCCATTTGATTTATGTTTATGACCGTCACAGCATTTTTCAGGACCATGTCTATTCCTaGTCACAACTGATCCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: TKVGLHLIYVYDRHSIFQDHVYS*SQLIPS Trigger: GCTAGGGATCAGTTGTGACCAGGAATAGACATGGTC...CTGAAAAATGCTGTGACGGTCATAAACATAAATCAAATGGAGCCCCACTTTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR-3UTR TCA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCTCGCATGATCAAAAATaGAGAACCACTGGTTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVSHDQK*RTTGCH Trigger: GTGACAACCAGTGGTTCTTCATTTTTGATCATGCGA...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000374050.4 ENST00000678234.1 |
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| 3UTR-3UTR TCA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCTTGGAAGAAATCACATaGCACATGTATCAGGAACAT | + |
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Preference number: 2 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVLEEIT*HMYQEH Trigger: ATGTTCCTGATACATGTGTCATGTGATTTCTTCCAA...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| 3UTR-3UTR GCA 90 bp | CAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCACGGAGACAAACCTACAGACTAGTTaGTTGCTGTTTTCCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: QNAFRMIKNEEPLVVTETNLQTS*LLFSKT Trigger: TGTTTTGGAAAACAGCAAGCAACTAGTCTGTAGGTT...TGTCTCCGTGACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| 3UTR TCA 72 bp | AGTCTCCCTGACCACTGGATGGTAAGCTACACTCCATaGGGGAAGGGACCATGTCTATTCCTGGTCACAACT | + |
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Preference number: 3 (lower is better) Translates to: SLPDHWMVSYTP*GKGPCLFLVTT Trigger: AGTTGTGACCAGGAATAGACATGGTCCCTTCCCTCATGGAGTGTAGCTTACCATCCAGTGGTCAGGGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR-3UTR CAA 90 bp | TGCATGATTTGCACTGTATTACTGAGTCTCCCTGACCACTGGATGGTAAGCTACGATATTCTGAAAGCCTaGGCGGGACAGGGGATCAGA | + |
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Preference number: 3 (lower is better) Translates to: CMICTVLLSLPDHWMVSYDILKA*AGQGIR Trigger: TCTGATCCCCTGTCCCGCCAAGGCTTTCAGAATATC...GTAGCTTACCATCCAGTGGTCAGGGAGACTCAGTAATACAGTGCAAATCATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR TCA 72 bp | GCTCTGCATGATTTGCACTGTATTACTGAGTCTCCCTaGCCACTGGATGGTAAGCTACACTCCATGAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: ALHDLHCITESP*PLDGKLHSMRE Trigger: TTCCCTCATGGAGTGTAGCTTACCATCCAGTGGTCAGGGAGACTCAGTAATACAGTGCAAATCATGCAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR TCA 72 bp | ACAGCTACCACATTTTCAAACTTCGACCAGGATCTCTaGGCTATGCTGGATATTCTGAAAGCCTTGGCGGGA | + |
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Preference number: 3 (lower is better) Translates to: TATTFSNFDQDL*AMLDILKALAG Trigger: TCCCGCCAAGGCTTTCAGAATATCCAGCATAGCTCAGAGATCCTGGTCGAAGTTTGAAAATGTGGTAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR-3UTR CAA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCATGAAGAACCACTGGTaGTCACGGAGACAGGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVMKNHW*SRRQGK Trigger: TTTTCCCTGTCTCCGTGACAACCAGTGGTTCTTCAT...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000374050.4 ENST00000678234.1 |
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| 3UTR-3UTR CAA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCAATATGCTTAATAACTaGCCCCAGGCTGTCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVNMLNN*PQAVPG Trigger: TCCTGGGACAGCCTGGGGCAAGTTATTAAGCATATT...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| CDS-3UTR TCA 90 bp | GTTCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCCCGGGCAGCCCCACCCTaGAACTCACTTTTGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VLSISHRGFQAIRKPSRARAAPP*NSLLRA Trigger: GGCCCGCAAAAGTGAGTTTCAGGGTGGGGCTGCCCG...GGCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS-3UTR TCA 90 bp | GGTTCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCTGGCGGCAGCGATTCTaGGAGCAAGGCAAGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GSFHLTSWLPGDPQAFQSWRQRF*EQGKRP Trigger: AGGCCGCTTGCCTTGCTCTCAGAATCGCTGCCGCCA...GCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS-3UTR TCA 90 bp | TCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCCTCTGGCGGCAGCGATTCTaGGAGCAAGGCAAGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SFHLTSWLPGDPQAFQSLWRQRF*EQGKRP Trigger: AGGCCGCTTGCCTTGCTCTCAGAATCGCTGCCGCCA...GAGGCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS-3UTR TCA 90 bp | TCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCCTCAATCTACCCACCACCTaGGGCCCAGCGGTCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SFHLTSWLPGDPQAFQSLNLPTT*GPAVFL Trigger: AAGAAAGACCGCTGGGCCTCAGGTGGTGGGTAGATT...GAGGCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS-3UTR GCA 90 bp | TTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCCTCAGCCCTGAAACTCACTTTTaGGGGCCTCGGACACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FHLTSWLPGDPQAFQSLSPETHF*GPRTPS Trigger: AGAAGGTGTCCGAGGCCCGCAAAAGTGAGTTTCAGG...GCTGAGGCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS-3UTR GCA 90 bp | GGTTCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCCCTGAAACTCACTTTTaGGGGCCTCGGACACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GSFHLTSWLPGDPQAFQSPETHF*GPRTPS Trigger: AGAAGGTGTCCGAGGCCCGCAAAAGTGAGTTTCAGG...GCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS-3UTR CCA 90 bp | TCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCCTCTTCCATCTCACATCGTaGCTTCCAGGCGATCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: SFHLTSWLPGDPQAFQSLFHLTS*LPGDPQ Trigger: TTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAA...GAGGCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS-3UTR TCA 90 bp | ATTTGCACTGTATTACTGAGTCTCCCTGACCACTGGATGGTAAGCTACACTCCATGGCGGCAGCGATTCTaGGAGCAAGGCAAGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ICTVLLSLPDHWMVSYTPWRQRF*EQGKRP Trigger: AGGCCGCTTGCCTTGCTCTCAGAATCGCTGCCGCCA...TGGAGTGTAGCTTACCATCCAGTGGTCAGGGAGACTCAGTAATACAGTGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGTATGTGCCTTTACTCACTGGACTTGGGCCTGGAAGTGTGTATGCTTCCGGTTCTTTCTTTTaGGGGCCTCGGACACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGRYVPLLTGLGPGSVYASGSFF*GPRTPS Trigger: AGAAGGTGTCCGAGGCCCGCAAAAGAAAGAACCGGA...AGCATACACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACATACCTCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR GCA 90 bp | GTTCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCCAACAAAAACAAATGGTaGCCCACCGCAGCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VLSISHRGFQAIRKPSRANKNKW*PTAASL Trigger: CAAGGAAGCTGCGGTGGGGCACCATTTGTTTTTGTT...GGCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000473413.1 |
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| CDS-3UTR GCA 90 bp | TCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCCTCACTCCACAGCACAGGTaGTTCTCTCTTCTATCCATT | + |
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Preference number: 4 (lower is better) Translates to: SFHLTSWLPGDPQAFQSLTPQHR*FSLLSI Trigger: AATGGATAGAAGAGAGAAGCACCTGTGCTGTGGAGT...GAGGCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678234.1 |
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| CDS-3UTR CCA 90 bp | TCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCCTCGTTCTGCAGACCATCTaGGTCAAAATGCATTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: SFHLTSWLPGDPQAFQSLVLQTI*VKMHFA Trigger: TGCGAAATGCATTTTGACCCAGATGGTCTGCAGAAC...GAGGCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678234.1 |
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| CDS-3UTR CCA 90 bp | TCACTGGACTTGGGCCTGGAAGTGTGTATGCTGGAACTACTAGAGGCCACAGTGAGTCTCCCTGACCACTaGATGGTAAGCTACACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLDLGLEVCMLELLEATVSLPDH*MVSYTP Trigger: TGGAGTGTAGCTTACCATCCAGTGGTCAGGGAGACT...CACTGTGGCCTCTAGTAGTTCCAGCATACACACTTCCAGGCCCAAGTCCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR TCA 90 bp | CAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCACGGAGACACGGGCAGCCCCACCCTaGAACTCACTTTTGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QNAFRMIKNEEPLVVTETRAAPP*NSLLRA Trigger: GGCCCGCAAAAGTGAGTTTCAGGGTGGGGCTGCCCG...TGTCTCCGTGACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000678234.1 |
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| CDS-3UTR GCA 90 bp | TGCAAGGAGGGAGGTATGTGCCTTTACTCACTGGACTTGGGCCTGGAAGTGTGTAAGGAGGGAGGTATGTaGCTTTACTCACTGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: CKEGGMCLYSLDLGLEVCKEGGM*LYSLDL Trigger: CAAGTCCAGTGAGTAAAGGCACATACCTCCCTCCTT...ACACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACATACCTCCCTCCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGGTATGTGCCTTTACTCACTGGACTTGGGCCTGGAAGTGTGTATGCTGACCATGTCTATTCCTaGTCACAACTGATCCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: GGRYVPLLTGLGPGSVYADHVYS*SQLIPS Trigger: GCTAGGGATCAGTTGTGACCAGGAATAGACATGGTC...AGCATACACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACATACCTCCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR CCA 90 bp | TGCAAGGAGGGAGGTATGTGCCTTTACTCACTGGACTTGGGCCTGGAAGTGTGTTTTACTCACTGGACTTaGGCCTGGAAGTGTGTATGC | + |
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Preference number: 4 (lower is better) Translates to: CKEGGMCLYSLDLGLEVCFTHWT*AWKCVC Trigger: GCATACACACTTCCAGGCCCAAGTCCAGTGAGTAAA...ACACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACATACCTCCCTCCTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR CCA 90 bp | ACTGGACTTGGGCCTGGAAGTGTGTATGCTGGAACTACTAGAGGCCACAGTGTATGTGCCTTTACTCACTaGACTTGGGCCTGGAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: TGLGPGSVYAGTTRGHSVCAFTH*TWAWKC Trigger: ACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACA...TACACTGTGGCCTCTAGTAGTTCCAGCATACACACTTCCAGGCCCAAGTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| 3UTR CAA 72 bp | TGCAAGGAGGGAGGTATGTGCCTTTACTCACTGGACTaGGGCCTGGAAGTGTGTATGCTGGAACTACTAGAG | + |
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Preference number: 4 (lower is better) Translates to: CKEGGMCLYSLD*GLEVCMLELLE Trigger: CTCTAGTAGTTCCAGCATACACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACATACCTCCCTCCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR TCA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCTGGCGGCAGCGATTCTaGGAGCAAGGCAAGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVWRQRF*EQGKRP Trigger: AGGCCGCTTGCCTTGCTCTCAGAATCGCTGCCGCCA...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000374050.4 ENST00000678234.1 |
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| CDS-3UTR TCA 90 bp | CCAAGAGTCCTGATAGTTTCTTTTCTCTGTGAGGCCCTTATCCATCCTTTCCCCCTATGCTGGATATTCTaGAAGCCTTGGCGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: PRVLIVSFLCEALIHPFPLCWIF*KPWRDR Trigger: CCTGTCCCGCCAAGGCTTTCAGAATATCCAGCATAG...GGGGAAAGGATGGATAAGGGCCTCACAGAGAAAAGAAACTATCAGGACTCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR GCA 90 bp | ACTGGACTTGGGCCTGGAAGTGTGTATGCTGGAACTACTAGAGGCCACAGTGTAAACAAAAACAAATGGTaGCCCACCGCAGCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TGLGPGSVYAGTTRGHSVNKNKW*PTAASL Trigger: CAAGGAAGCTGCGGTGGGGCACCATTTGTTTTTGTT...TACACTGTGGCCTCTAGTAGTTCCAGCATACACACTTCCAGGCCCAAGTCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR TCA 90 bp | TGCAAGGAGGGAGGTATGTGCCTTTACTCACTGGACTTGGGCCTGGAAGTGTGTAAGTGGGGCTCCATTTaGTTTATGTTTATGACCGTC | + |
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Preference number: 4 (lower is better) Translates to: CKEGGMCLYSLDLGLEVCKWGSI*FMFMTV Trigger: GACGGTCATAAACATAAATCAAATGGAGCCCCACTT...ACACACTTCCAGGCCCAAGTCCAGTGAGTAAAGGCACATACCTCCCTCCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR TCA 90 bp | ACTGGACTTGGGCCTGGAAGTGTGTATGCTGGAACTACTAGAGGCCACAGTGTAGGTGAGAGAAAGTCCTaGGCATATTATTTAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TGLGPGSVYAGTTRGHSVGERKS*AYYLSS Trigger: AGAGCTTAAATAATATGCTCAGGACTTTCTCTCACC...TACACTGTGGCCTCTAGTAGTTCCAGCATACACACTTCCAGGCCCAAGTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR TCA 90 bp | ATGATTTGCACTGTATTACTGAGTCTCCCTGACCACTGGATGGTAAGCTACACTTTCGACCAGGATCTCTaGGCTATGCTGGATATTCTG | + |
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Preference number: 4 (lower is better) Translates to: MICTVLLSLPDHWMVSYTFDQDL*AMLDIL Trigger: CAGAATATCCAGCATAGCTCAGAGATCCTGGTCGAA...AGTGTAGCTTACCATCCAGTGGTCAGGGAGACTCAGTAATACAGTGCAAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR GCA 90 bp | CAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCACGGAGACATCCGGTTCTTTCTTTTaGGGGCCTCGGACACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QNAFRMIKNEEPLVVTETSGSFF*GPRTPS Trigger: AGAAGGTGTCCGAGGCCCGCAAAAGAAAGAACCGGA...TGTCTCCGTGACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| CDS-3UTR GCA 90 bp | TGCATGATTTGCACTGTATTACTGAGTCTCCCTGACCACTGGATGGTAAGCTACTTCCACAATTGTCCCTaGCTCCTCTATGCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: CMICTVLLSLPDHWMVSYFHNCP*LLYAFC Trigger: ACAGAAAGCATAGAGGAGGCAGGGACAATTGTGGAA...GTAGCTTACCATCCAGTGGTCAGGGAGACTCAGTAATACAGTGCAAATCATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR GCA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCATATGCTTAATAACTTaGCCCAGGCTGTCCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVICLIT*PRLSQD Trigger: GTCCTGGGACAGCCTGGGGCAAGTTATTAAGCATAT...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| CDS-3UTR CCA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCAAAATGAAGAACCACTaGTTGTCACGGAGACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVKMKNH*LSRRQG Trigger: TCCCTGTCTCCGTGACAACCAGTGGTTCTTCATTTT...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000374050.4 ENST00000678234.1 |
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| 3UTR CAA 72 bp | CTGTACTATATACAATATACTAAAGTGGGGCTCCATTaGATTTATGTTTATGACCGTCACAGCATTTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LYYIQYTKVGLH*IYVYDRHSIFQ Trigger: CTGAAAAATGCTGTGACGGTCATAAACATAAATCAAATGGAGCCCCACTTTAGTATATTGTATATAGTACAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS TCA 90 bp | CCAGCGGTCTTTCTTCGACTCGCGCCACGCCGGGCAGCCCCACCCTaGAACTCACTTTTGCGGGCCTCGGACACCTTCTCGGCTGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PAVFLRLAPRRAAPP*NSLLRASDTFSAAR Trigger: GCGGGCAGCCGAGAAGGTGTCCGAGGCCCGCAAAAGTGAGTTTCAGGGTGGGGCTGCCCGGCGTGGCGCGAGTCGAAGAAAGACCGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS TCA 90 bp | CACGCCCGCACCCCGCAGTTTTTCGGGCCTAATCTACCCACCACCTaGGGCCCAGCGGTCTTTCTTCGACTCGCGCCACGCCGGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: HARTPQFFGPNLPTT*GPAVFLRLAPRRAA Trigger: GGCTGCCCGGCGTGGCGCGAGTCGAAGAAAGACCGCTGGGCCTCAGGTGGTGGGTAGATTAGGCCCGAAAAACTGCGGGGTGCGGGCGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS-3UTR CAA 90 bp | GGTTCTTTCCATCTCACATCGTGGCTTCCAGGCGATCCGCAAGCCTTCCAGAGCATGAAGAACCACTGGTaGTCACGGAGACAGGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: GSFHLTSWLPGDPQAFQSMKNHW*SRRQGK Trigger: TTTTCCCTGTCTCCGTGACAACCAGTGGTTCTTCAT...GCTCTGGAAGGCTTGCGGATCGCCTGGAAGCCACGATGTGAGATGGAAAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678234.1 |
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| CDS-3UTR CAA 90 bp | TGCATGATTTGCACTGTATTACTGAGTCTCCCTGACCACTGGATGGTAAGCTACCTCCGGTTCTTTCTTTaGCGGGCCTCGGACACCTTC | + |
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Preference number: 5 (lower is better) Translates to: CMICTVLLSLPDHWMVSYLRFFL*RASDTF Trigger: GAAGGTGTCCGAGGCCCGCAAAAGAAAGAACCGGAG...GTAGCTTACCATCCAGTGGTCAGGGAGACTCAGTAATACAGTGCAAATCATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR CAA 90 bp | CAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCACGGAGACACTCCGGTTCTTTCTTTaGCGGGCCTCGGACACCTTC | + |
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Preference number: 5 (lower is better) Translates to: QNAFRMIKNEEPLVVTETLRFFL*RASDTF Trigger: GAAGGTGTCCGAGGCCCGCAAAAGAAAGAACCGGAG...TGTCTCCGTGACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| CDS-3UTR CAA 90 bp | ACTGGACTTGGGCCTGGAAGTGTGTATGCTGGAACTACTAGAGGCCACAGTGTAGTAGCTCTGCATGATTaGCACTGTATTACTGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: TGLGPGSVYAGTTRGHSVVALHD*HCITES Trigger: AGACTCAGTAATACAGTGCAAATCATGCAGAGCTAC...TACACTGTGGCCTCTAGTAGTTCCAGCATACACACTTCCAGGCCCAAGTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR CAA 90 bp | ATTTGCACTGTATTACTGAGTCTCCCTGACCACTGGATGGTAAGCTACACTCCACTTTACTCACTGGACTaGGGCCTGGAAGTGTGTATG | + |
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Preference number: 5 (lower is better) Translates to: ICTVLLSLPDHWMVSYTPLYSLD*GLEVCM Trigger: CATACACACTTCCAGGCCCAAGTCCAGTGAGTAAAG...TGGAGTGTAGCTTACCATCCAGTGGTCAGGGAGACTCAGTAATACAGTGCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS-3UTR CAA 90 bp | GAACTTGAGAATGATACAAAGCCAAACACAGAGGTGAGAGAAAGTCCTGAGCATGATATTCTGAAAGCCTaGGCGGGACAGGGGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: ELENDTKPNTEVRESPEHDILKA*AGQGIR Trigger: TCTGATCCCCTGTCCCGCCAAGGCTTTCAGAATATC...ATGCTCAGGACTTTCTCTCACCTCTGTGTTTGGCTTTGTATCATTCTCAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS TCA 90 bp | CATTTTCAAACTTCGACCAGGATCTCTGAGCTATGCTGGATATTCTaGAAGCCTTGGCGGGACAGGGGATCAGAAACTAAAGCAGTAACA | + |
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Preference number: 5 (lower is better) Translates to: HFQTSTRISELCWIF*KPWRDRGSETKAVT Trigger: TGTTACTGCTTTAGTTTCTGATCCCCTGTCCCGCCAAGGCTTTCAGAATATCCAGCATAGCTCAGAGATCCTGGTCGAAGTTTGAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS GCA 90 bp | AACACCTTAAGTATGCTGCTGATTAAAGGTGCAACCCTACTCAGATaGTTAGCAAGAAGGCTAATAAGCTCGCAAGGGACAGCAACATAT | + |
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Preference number: 5 (lower is better) Translates to: NTLSMLLIKGATLLR*LARRLISSQGTATY Trigger: ATATGTTGCTGTCCCTTGCGAGCTTATTAGCCTTCTTGCTAAGCATCTGAGTAGGGTTGCACCTTTAATCAGCAGCATACTTAAGGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677543.1 |
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| CDS-3UTR CAA 90 bp | CATCTGGGTCAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCGGTCATCTAGTTGTATaGTATCAGAACAAGCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: HLGQNAFRMIKNEEPLVVGHLVV*YQNKQG Trigger: TCCTTGCTTGTTCTGATACAATACAACTAGATGACC...GACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTGACCCAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| CDS-3UTR CAA 90 bp | CAAAATGCATTTCGCATGATCAAAAATGAAGAACCACTGGTTGTCACGGAGACATTTACCTATAAGATTTaGCAACCAAAGACTTTCGGC | + |
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Preference number: 5 (lower is better) Translates to: QNAFRMIKNEEPLVVTETFTYKI*QPKTFG Trigger: GCCGAAAGTCTTTGGTTGCAAAATCTTATAGGTAAA...TGTCTCCGTGACAACCAGTGGTTCTTCATTTTTGATCATGCGAAATGCATTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374050.4 |
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| CDS-3UTR CAA 90 bp | ACTAAAGTGGGGCTCCATTTGATTTATGTTTATGACCGTCACAGCATTTTTCAGAAAGTGGGGCTCCATTaGATTTATGTTTATGACCGT | + |
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Preference number: 5 (lower is better) Translates to: TKVGLHLIYVYDRHSIFQKVGLH*IYVYDR Trigger: ACGGTCATAAACATAAATCAAATGGAGCCCCACTTT...CTGAAAAATGCTGTGACGGTCATAAACATAAATCAAATGGAGCCCCACTTTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS GCA 72 bp | GGCCCCTTGGGTCAGCTGACACAGCCGCCCACAATCTaGGCTTGCTCCTTGCGCCTGCGCTTCGCCCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: GPLGQLTQPPTI*ACSLRLRFAPV Trigger: AACGGGGGCGAAGCGCAGGCGCAAGGAGCAAGCGCAGATTGTGGGCGGCTGTGTCAGCTGACCCAAGGGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677115.1 |
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| CDS GCA 72 bp | TTGGGTCAGCTGACACAGCCGCCCACAATCTGCGCTTaGTCCTTGCGCCTGCGCTTCGCCCCCGTTGTCACG | + |
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Preference number: 6 (lower is better) Translates to: LGQLTQPPTICA*SLRLRFAPVVT Trigger: CGTGACAACGGGGGCGAAGCGCAGGCGCAAGGAGCAAGCGCAGATTGTGGGCGGCTGTGTCAGCTGACCCAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677115.1 |
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| CDS TCA 72 bp | TTTCTTCGACTCGCGCCACGCCGGGCAGCCCCACCCTaGAACTCACTTTTGCGGGCCTCGGACACCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: FLRLAPRRAAPP*NSLLRASDTFS Trigger: CGAGAAGGTGTCCGAGGCCCGCAAAAGTGAGTTTCAGGGTGGGGCTGCCCGGCGTGGCGCGAGTCGAAGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS TCA 72 bp | ACCCCGCAGTTTTTCGGGCCTAATCTACCCACCACCTaGGGCCCAGCGGTCTTTCTTCGACTCGCGCCACGC | + |
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Preference number: 6 (lower is better) Translates to: TPQFFGPNLPTT*GPAVFLRLAPR Trigger: GCGTGGCGCGAGTCGAAGAAAGACCGCTGGGCCTCAGGTGGTGGGTAGATTAGGCCCGAAAAACTGCGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000473413.1 ENST00000678234.1 |
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| CDS TCA 72 bp | ACTTCGACCAGGATCTCTGAGCTATGCTGGATATTCTaGAAGCCTTGGCGGGACAGGGGATCAGAAACTAAA | + |
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Preference number: 6 (lower is better) Translates to: TSTRISELCWIF*KPWRDRGSETK Trigger: TTTAGTTTCTGATCCCCTGTCCCGCCAAGGCTTTCAGAATATCCAGCATAGCTCAGAGATCCTGGTCGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677498.1 |
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| CDS CAA 72 bp | CAGTGCTGCAACTGCCACGGGATCCCAATGCCATTATaGGTTAGTGTTTTAGTTCTTAAGTTCAACAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: QCCNCHGIPMPL*VSVLVLKFNSG Trigger: TCCACTGTTGAACTTAAGAACTAAAACACTAACCAATAATGGCATTGGGATCCCGTGGCAGTTGCAGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679150.1 |
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