RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP6V1FNB (Homo sapiens)

Ensembl gene IDs: ENSG00000272899

Ensembl transcript IDs: ENST00000609480.4

Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCTCCGCACCGCCAGGAGGACGCGGCTGGGCGGCGGCGCGCCCTaGGGGAGCAGCTGGAGCAAATGCATCGGGAGAGGACGGAGCGGC +
Preference number: 1 (lower is better)
Translates to: ALRTARRTRLGGGAP*GSSWSKCIGRGRSG
Trigger: GCCGCTCCGTCCTCTCCCGATGCATTTGCTCCAGCTGCTCCCGCAGGGCGCGCCGCCGCCCAGCCGCGTCCTCCTGGCGGTGCGGAGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 90 bp GGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTaGGCGCCGAGGTATCCGGGCAGCAGGGGCTCCTCGGGGCTCTCC +
Preference number: 1 (lower is better)
Translates to: GGSQVAEPEPRCQRP*APRYPGSRGSSGLS
Trigger: GGAGAGCCCCGAGGAGCCCCTGCTGCCCGGATACCTCGGCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 90 bp GTCGGGTGGGGCGGCCCTGAGCGTCCCAAGGCCTTGAAGGCCGCGTaGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTTAAGC +
Preference number: 1 (lower is better)
Translates to: VGWGGPERPKALKAA*PAPLSTAKAPAGLS
Trigger: GCTTAAGCCCGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTTGGGACGCTCAGGGCCGCCCCACCCGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 90 bp AGGAGGTGGGCCAGGCTTGGCTTCCGGGTGCCCTCCGGGGTCGGGTaGGGCGGCCCTGAGCGTCCCAAGGCCTTGAAGGCCGCGTGGCCG +
Preference number: 1 (lower is better)
Translates to: RRWARLGFRVPSGVG*GGPERPKALKAAWP
Trigger: CGGCCACGCGGCCTTCAAGGCCTTGGGACGCTCAGGGCCGCCCCACCCGACCCCGGAGGGCACCCGGAAGCCAAGCCTGGCCCACCTCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 90 bp CCTGCCTGGAGCGGGCGGGGCACCGAGGGGCGGCCGGACGCTGACTaGCGCCTCTGCAGGTCCTGGAACGCCTCCACATCGCCAGGAACC +
Preference number: 1 (lower is better)
Translates to: PAWSGRGTEGRPDAD*RLCRSWNASTSPGT
Trigger: GGTTCCTGGCGATGTGGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGTGCCCCGCCCGCTCCAGGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 90 bp CTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTaGGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCAGCGGCT +
Preference number: 1 (lower is better)
Translates to: LEGRVAGAPQHRQGA*GLKRGAAGDGSAAA
Trigger: AGCCGCTGCAGAGCCGTCACCTGCTGCGCCGCGCTTAAGCCCGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 90 bp GGCACCGAGGGGCGGCCGGACGCTGACTGCCGCCTCTGCAGGTCCTaGAACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACC +
Preference number: 1 (lower is better)
Translates to: GTEGRPDADCRLCRS*NASTSPGTATAGFT
Trigger: GGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 90 bp CCTCTGCAGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTaGCGGGTTCACCCCGTGGGGCTCCCGCCCAGTCCGGCTCAACTC +
Preference number: 1 (lower is better)
Translates to: PLQVLERLHIARNRH*RVHPVGLPPSPAQL
Trigger: GAGTTGAGCCGGACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCTGCAGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 90 bp AACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTaGGGCTCCCGCCCAGTCCGGCTCAACTCCCGCCACAGGCAAGAC +
Preference number: 1 (lower is better)
Translates to: NASTSPGTATAGFTP*GSRPVRLNSRHRQD
Trigger: GTCTTGCCTGTGGCGGGAGTTGAGCCGGACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 90 bp GCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACTGTaGAGCCCCCAGAGGAAGGCGACCCCCATAGCCATCCGAGGGACT +
Preference number: 1 (lower is better)
Translates to: AISHKPGRWLPERPL*SPQRKATPIAIRGT
Trigger: AGTCCCTCGGATGGCTATGGGGGTCGCCTTCCTCTGGGGGCTGCACAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR TCA 90 bp AGGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTaGAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACC +
Preference number: 1 (lower is better)
Translates to: RKATPIAIRGTPAGP*KHRLQSLWAGRAQT
Trigger: GGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR TCA 90 bp CAGGAACACCCAGAACTTCCTGGAACTACTGTGTTCCCCTGGTGCTaGGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCACC +
Preference number: 1 (lower is better)
Translates to: QEHPELPGTTVFPWC*GSRACEVVLALPST
Trigger: GGTGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGAACACAGTAGTTCCAGGAAGTTCTGGGTGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 90 bp GGAAAGGCGAGTCCCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTaGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAG +
Preference number: 1 (lower is better)
Translates to: GKASPQSPGKKMLRS*EGNISQAWEVAPGE
Trigger: CTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGGACTCGCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 90 bp GATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTaGGGCGAGATCAAAGATGCTCCTCAGAGTCAGAAGGTGAAGACA +
Preference number: 1 (lower is better)
Translates to: DQKAETPQRKRAEAS*GEIKDAPQSQKVKT
Trigger: TGTCTTCACCTTCTGACTCTGAGGAGCATCTTTGATCTCGCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 90 bp GCACTGGGACTCCCTAAACTTCCTGGCTCTAGTCTAGGTGAACTGTaGATGAGGGGCTGGGACATGAGCTCCCAATACTGGTCTTTCTTC +
Preference number: 1 (lower is better)
Translates to: ALGLPKLPGSSLGEL*MRGWDMSSQYWSFF
Trigger: GAAGAAAGACCAGTATTGGGAGCTCATGTCCCAGCCCCTCATGCACAGTTCACCTAGACTAGAGCCAGGAAGTTTAGGGAGTCCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 90 bp CTAGGTGAACTGTGCATGAGGGGCTGGGACATGAGCTCCCAATACTaGTCTTTCTTCCTCAGGCTCCTTACAAGAGCTCAACCCCACTAC +
Preference number: 1 (lower is better)
Translates to: LGELCMRGWDMSSQY*SFFLRLLTRAQPHY
Trigger: GTAGTGGGGTTGAGCTCTTGTAAGGAGCCTGAGGAAGAAAGACCAGTATTGGGAGCTCATGTCCCAGCCCCTCATGCACAGTTCACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 90 bp CCTAAACTTCCTGGCTCTAGTCTAGGTGAACTGTGCATGAGGGGCTaGGACATGAGCTCCCAATACTGGTCTTTCTTCCTCAGGCTCCTT +
Preference number: 1 (lower is better)
Translates to: PKLPGSSLGELCMRG*DMSSQYWSFFLRLL
Trigger: AAGGAGCCTGAGGAAGAAAGACCAGTATTGGGAGCTCATGTCCCAGCCCCTCATGCACAGTTCACCTAGACTAGAGCCAGGAAGTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 90 bp AATTTTCTAGTAAGACAACAGATGAGAATTACAGAAGTGGGAGGTTaGAGATTGTTTTTGCAGTTTGTGGCAATTATTTCTAAAGGCCCA +
Preference number: 1 (lower is better)
Translates to: NFLVRQQMRITEVGG*RLFLQFVAIISKGP
Trigger: TGGGCCTTTAGAAATAATTGCCACAAACTGCAAAAACAATCTCCAACCTCCCACTTCTGTAATTCTCATCTGTTGTCTTACTAGAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp GCGGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCGGCTTGGCTTCCGGGTaGCCTCCGGGGTCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: AAAPRSRSRSRDASDPARGLASG*PPGSGG
Trigger: CCCACCCGACCCCGGAGGGCACCCGGAAGCCAAGCC...GCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR TCA 90 bp AAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGCGCGGCGCAGCAGGTaGCGGCTCTGCAGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: KALKAAWPAPLSTAKAPAARRSR*RLCSGC
Trigger: GCAGCCGCTGCAGAGCCGTCACCTGCTGCGCCGCGC...CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp GCCCCACTGAGCCGCGGACGCTCAGCGCTCCGCACCGCCAGGAGGACGCGGCTGGGCGGCGGCGCGCCCTaGGGGAGCAGCTGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: APLSRGRSALRTARRTRLGGGAP*GSSWSK
Trigger: TTTGCTCCAGCTGCTCCCGCAGGGCGCGCCGCCGCC...CAGCCGCGTCCTCCTGGCGGTGCGGAGCGCTGAGCGTCCGCGGCTCAGTGGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp TCCGGGGCCCCCAGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCCTGGAGTGCCTTGAAGGCCGCGTaGCCGGCGCCCCTCAGCACC +
Preference number: 2 (lower is better)
Translates to: SGAPRPGARSARAAGPWSALKAA*PAPLST
Trigger: GGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGC...ACTCCAGGGCCCTGCAGCCCGTGCGGATCGCGCTCCAGGCCTGGGGGCCCCGGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp ACCGAGGGGCGGCCGGACGCTGACTGCCGCCTCTGCAGGTCCTGGAACGCCTCCGCCAGGAACCGCCACTaGCGGGTTCACCCCGTGGGG +
Preference number: 2 (lower is better)
Translates to: TEGRPDADCRLCRSWNASARNRH*RVHPVG
Trigger: CCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGC...GGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR TCA 90 bp CGGGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGGGGGCGGCCGGACGCTaGCTGCCGCCTCTGCAGGTC +
Preference number: 2 (lower is better)
Translates to: RVSSLGLMGTPGQSGSGRGAAGR*LPPLQV
Trigger: GACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCC...CCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACCCG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp TCCGGGGCCCCCAGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCCTGGAGTAGCAGCTGGAGCAAATaGATCGGGAGAGGACGGAGC +
Preference number: 2 (lower is better)
Translates to: SGAPRPGARSARAAGPWSSSWSK*IGRGRS
Trigger: GCTCCGTCCTCTCCCGATGCATTTGCTCCAGCTGCT...ACTCCAGGGCCCTGCAGCCCGTGCGGATCGCGCTCCAGGCCTGGGGGCCCCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp ACCGAGGGGCGGCCGGACGCTGACTGCCGCCTCTGCAGGTCCTGGAACGCCTCCGTGCTGAGGATCCCGTaGCTGCGAAGTAGTGCTCGC +
Preference number: 2 (lower is better)
Translates to: TEGRPDADCRLCRSWNASVLRIP*LRSSAR
Trigger: GCGAGCACTACTTCGCAGGCACGGGATCCTCAGCAC...GGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp CAGGATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTGGGGCGGCAGGTGTGCCAGGTaGTGCCCCGCCCGCCCCACT +
Preference number: 2 (lower is better)
Translates to: QDQKAETPQRKRAEASWGGRCAR*CPARPT
Trigger: AGTGGGGCGGGCGGGGCAGCACCTGGCACACCTGCC...GCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp CAGGATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTGGGGCGAGCCGGAGCCGAGATaGCAGCGACCCTGCGCGCCG +
Preference number: 2 (lower is better)
Translates to: QDQKAETPQRKRAEASWGEPEPR*QRPCAP
Trigger: CGGCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTC...GCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR TCA 90 bp CAGGATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTGGGGCACTGCACTCTGGCAGTaGCTCGGCGGGGCGCGAGGG +
Preference number: 2 (lower is better)
Translates to: QDQKAETPQRKRAEASWGTALWQ*LGGARG
Trigger: CCCTCGCGCCCCGCCGAGTCACTGCCAGAGTGCAGT...GCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp ACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGAGCGGCTGCTGGAGCTaGACAGCGCGGCCAGGCGGC +
Preference number: 2 (lower is better)
Translates to: TQSMIKGEPQRSAPAVAKSGCWS*TARPGG
Trigger: GCCGCCTGGCCGCGCTGTGCAGCTCCAGCAGCCGCT...CTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR TCA 90 bp AAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGCCCTCTGGTCATTGCTaGGTCCTCAAAGGGATGATT +
Preference number: 2 (lower is better)
Translates to: KALKAAWPAPLSTAKAPAPSGHC*VLKGMI
Trigger: AATCATCCCTTTGAGGACTCAGCAATGACCAGAGGG...CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp ACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGGAGGTGGGCCAGGCTTaGCTTCCGGGTGCCCTCCGG +
Preference number: 2 (lower is better)
Translates to: TQSMIKGEPQRSAPAVAKEVGQA*LPGALR
Trigger: CCGGAGGGCACCCGGAAGCCAAGCCTGGCCCACCTC...CTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CAA 90 bp CCCAGCACCGTGACCCTTCTCACTCCCAGGCCTCCTGTGGTGGTCTaGAGGAAGGGGCTGTGCAGGTCCCTCTGGAGTGGTCTGCCTTGG +
Preference number: 2 (lower is better)
Translates to: PSTVTLLTPRPPVVV*RKGLCRSLWSGLPW
Trigger: CCAAGGCAGACCACTCCAGAGGGACCTGCACAGCCCCTTCCTCAAGACCACCACAGGAGGCCTGGGAGTGAGAAGGGTCACGGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR TCA 90 bp TGGATGCAGAACAGCTCTCCTTCCTCCACAGCTGCAGGGGAGCGGCAACACATCCGGGTGGGGCGGCCCTaGGCGTCCCAAGGCCTTGAA +
Preference number: 2 (lower is better)
Translates to: WMQNSSPSSTAAGERQHIRVGRP*ASQGLE
Trigger: TTCAAGGCCTTGGGACGCTCAGGGCCGCCCCACCCG...GATGTGTTGCCGCTCCCCTGCAGCTGTGGAGGAAGGAGAGCTGTTCTGCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp CAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGAGATGCCAGCGACCCTaGGCGCCGAGGTATCCGGGC +
Preference number: 2 (lower is better)
Translates to: QSMIKGEPQRSAPAVAKLRCQRP*APRYPG
Trigger: GCCCGGATACCTCGGCGCGCAGGGTCGCTGGCATCT...CAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp AAAACCTGCCTTCCCAAGATGCCCTTGAAGGGCTGGGCTCGGACCCGCACCTGGCACAAGCCTGGGAGGTaGCTCCCGGAGAGGCCACTG +
Preference number: 2 (lower is better)
Translates to: KTCLPKMPLKGWARTRTWHKPGR*LPERPL
Trigger: CAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTG...CCAGGTGCGGGTCCGAGCCCAGCCCTTCAAGGGCATCTTGGGAAGGCAGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp GGGTCTGCAGGTTCCCTCTCAAACCTGGGCCCAAAGTGCTTTTCCTTTCCAGGAGGAGGGGGCGTGGGCTaGGCTTACCCGCCCGAAGCC +
Preference number: 2 (lower is better)
Translates to: GSAGSLSNLGPKCFSFPGGGGVG*AYPPEA
Trigger: GGCTTCGGGCGGGTAAGCGCAGCCCACGCCCCCTCC...TCCTGGAAAGGAAAAGCACTTTGGGCCCAGGTTTGAGAGGGAACCTGCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp CGGGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGCATCCGAGGGACTCCTaGGGGTCCCTGAAAGCACAG +
Preference number: 2 (lower is better)
Translates to: RVSSLGLMGTPGQSGSGRHPRDS*GSLKAQ
Trigger: CTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATG...CCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp CAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGACCCCTAGAAGGCGGTaGGGCCACAAGGAGCCTGCG +
Preference number: 2 (lower is better)
Translates to: QSMIKGEPQRSAPAVAKLTPRRR*GHKEPA
Trigger: CGCAGGCTCCTTGTGGCCCCACCGCCTTCTAGGGGT...CAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR TCA 90 bp GTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACCCCTGGCCTCCGAAATaGCAAGCCGCTCTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: VLGRQYLTSLGGGSRRGHPWPPK*QAALSP
Trigger: TGGGGAGAGAGCGGCTTGTCATTTCGGAGGCCAGGG...GTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp CAGGATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTGGGGCCACACACAGCAGCTTTaGCCCACCAGGAGGCCTGTT +
Preference number: 2 (lower is better)
Translates to: QDQKAETPQRKRAEASWGHTQQL*PTRRPV
Trigger: AACAGGCCTCCTGGTGGGGCAAAGCTGCTGTGTGTG...GCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGTGCCAGGTGCTaGCCCGCCCGCCCCACTGAG +
Preference number: 2 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGRCARC*PARPTE
Trigger: CTCAGTGGGGCGGGCGGGGCAGCACCTGGCACACCT...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR TCA 90 bp AACTGTGACAGCCTGAGGTTCAGACAGCGCCCTCAGGGCACCCCTAGCCATGCACGGGTCCCTTTGAAGTaGGCGCACTGCACTCTGGCA +
Preference number: 2 (lower is better)
Translates to: NCDSLRFRQRPQGTPSHARVPLK*AHCTLA
Trigger: TGCCAGAGTGCAGTGCGCTCACTTCAAAGGGACCCG...TGCATGGCTAGGGGTGCCCTGAGGGCGCTGTCTGAACCTCAGGCTGTCACAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp CGGGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTTCCTTTCCAGGACCTaGCCCAGAGGGAAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: RVSSLGLMGTPGQSGSGRFLSRT*PRGKRG
Trigger: TCCTCTCTTCCCTCTGGGCCAGGTCCTGGAAAGGAA...CCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CAA 90 bp GGGAAAGGCGAGTCCCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTaGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGA +
Preference number: 2 (lower is better)
Translates to: GKGESPESREEDAAV*GRQYLTSLGGGSRR
Trigger: TCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGGACTCGCCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp CGGGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTCAGAAAGGCCTGAATaGAACCTCAGGGACAGGGAG +
Preference number: 2 (lower is better)
Translates to: RVSSLGLMGTPGQSGSGRSERPE*NLRDRE
Trigger: CTCCCTGTCCCTGAGGTTGCATTCAGGCCTTTCTGA...CCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp GGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTGGGAGGAGTTTTGGGGTaGCAGGTAGCTCAGAGTGCA +
Preference number: 2 (lower is better)
Translates to: GFFSGPDGHTRAKWEWPVGGVLG*QVAQSA
Trigger: TGCACTCTGAGCTACCTGGCACCCCAAAACTCCTCC...CACCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp AAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGCCCTGCGGGAGCAGCTaGAGCAAATGCATCGGGAGA +
Preference number: 2 (lower is better)
Translates to: KAQTPKPVGRESPNLRRRPCGSS*SKCIGR
Trigger: TCTCCCGATGCATTTGCTCCAGCTGCTCCCGCAGGG...CCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp CTCCCTAAACTTCCTGGCTCTAGTCTAGGTGAACTGTGCATGAGGGGCTGGGACATGCCCTTGAAGGGCTaGGCTCGGACCCGCACCTGG +
Preference number: 2 (lower is better)
Translates to: LPKLPGSSLGELCMRGWDMPLKG*ARTRTW
Trigger: CCAGGTGCGGGTCCGAGCCCAGCCCTTCAAGGGCAT...GTCCCAGCCCCTCATGCACAGTTCACCTAGACTAGAGCCAGGAAGTTTAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp TGGATGCAGAACAGCTCTCCTTCCTCCACAGCTGCAGGGGAGCGGCAACACATCGAATCAGGCAAAGGCTaGCCCCTGGGGTCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: WMQNSSPSSTAAGERQHIESGKG*PLGSAG
Trigger: ACCTGCAGACCCCAGGGGCCAGCCTTTGCCTGATTC...GATGTGTTGCCGCTCCCCTGCAGCTGTGGAGGAAGGAGAGCTGTTCTGCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp GGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTGCTGTGCATGAGGGGCTaGGACATGAGCTCCCAATAC +
Preference number: 2 (lower is better)
Translates to: GFFSGPDGHTRAKWEWPVLCMRG*DMSSQY
Trigger: GTATTGGGAGCTCATGTCCCAGCCCCTCATGCACAG...CACCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CCA 90 bp CATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCCTTCCCAGCACCCTCTaGTCATTGCTGAGTCCTCAA +
Preference number: 2 (lower is better)
Translates to: HPRDSCGSLKAQTPKPVGLPSTL*SLLSPQ
Trigger: TTGAGGACTCAGCAATGACCAGAGGGTGCTGGGAAG...GCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR TCA 90 bp GTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACAGTTTCAGAAAGGCCTaGATGCAACCTCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: VLGRQYLTSLGGGSRRGHSFRKA*MQPQGQ
Trigger: CTGTCCCTGAGGTTGCATTCAGGCCTTTCTGAAACT...GTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp TGCGTTTTCACAGAGAGTGCACCCATTTGGTTACTGTTAGGAATATTCACACGTCACCGCCAAGGCGCCTaGGGGCTTAAGCGCGGCGCA +
Preference number: 2 (lower is better)
Translates to: CVFTESAPIWLLLGIFTRHRQGA*GLKRGA
Trigger: TGCGCCGCGCTTAAGCCCGCAGGCGCCTTGGCGGTG...ACGTGTGAATATTCCTAACAGTAACCAAATGGGTGCACTCTCTGTGAAAACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp GGGTCTGCAGGTTCCCTCTCAAACCTGGGCCCAAAGTGCTTTTCCTTTCCAGGAGAATTTAGTCCTAAGTaGCAGGGAAAGGCGAGTCCC +
Preference number: 2 (lower is better)
Translates to: GSAGSLSNLGPKCFSFPGEFSPK*QGKASP
Trigger: GGGACTCGCCTTTCCCTGGCACTTAGGACTAAATTC...TCCTGGAAAGGAAAAGCACTTTGGGCCCAGGTTTGAGAGGGAACCTGCAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp TGCGTTTTCACAGAGAGTGCACCCATTTGGTTACTGTTAGGAATATTCACACGTGCTGACTGCCGCCTCTaGAGGTCCTGGAACGCCTCC +
Preference number: 2 (lower is better)
Translates to: CVFTESAPIWLLLGIFTRADCRL*RSWNAS
Trigger: GGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGC...ACGTGTGAATATTCCTAACAGTAACCAAATGGGTGCACTCTCTGTGAAAACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGCAAGAGGGCAACTTaGAGGTCTGATAGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGSKRAT*RSDSFR
Trigger: TCTGAAACTATCAGACCTGCAAGTTGCCCTCTTGCT...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR TCA 90 bp GAGGTTGGAGATTGTTTTTGCAGTTTGTGGCAATTATTTCTAAAGGCCCAGGAGGAGGAGGCTCTTCAGTaGAGCACCTTCCACACTACA +
Preference number: 2 (lower is better)
Translates to: EVGDCFCSLWQLFLKAQEEEALQ*STFHTT
Trigger: TGTAGTGTGGAAGGTGCTTCACTGAAGAGCCTCCTC...CTCCTGGGCCTTTAGAAATAATTGCCACAAACTGCAAAAACAATCTCCAACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR GCA 90 bp TGCGTTTTCACAGAGAGTGCACCCATTTGGTTACTGTTAGGAATATTCACACGTGGGCGAGATCAAAGATaGTCCTCAGAGTCAGAAGGT +
Preference number: 2 (lower is better)
Translates to: CVFTESAPIWLLLGIFTRGRDQR*SSESEG
Trigger: ACCTTCTGACTCTGAGGAGCATCTTTGATCTCGCCC...ACGTGTGAATATTCCTAACAGTAACCAAATGGGTGCACTCTCTGTGAAAACGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CAA 90 bp CTAGTAAGACAACAGATGAGAATTACAGAAGTGGGAGGTTGGAGATaGTTTTTGCAGTTTGTGGCAATTATTTCTAAAGGCCCAGGAGTC +
Preference number: 2 (lower is better)
Translates to: LVRQQMRITEVGGWR*FLQFVAIISKGPGV
Trigger: GACTCCTGGGCCTTTAGAAATAATTGCCACAAACTGCAAAAACAATCTCCAACCTCCCACTTCTGTAATTCTCATCTGTTGTCTTACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR TCA 72 bp GGGTCGGGTGGGGCGGCCCTGAGCGTCCCAAGGCCTTaGAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCA +
Preference number: 3 (lower is better)
Translates to: GSGGAALSVPRP*RPRGRRPSAPP
Trigger: TGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTTGGGACGCTCAGGGCCGCCCCACCCGACCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp GGCGGCCCTGAGCGTCCCAAGGCCTTGAAGGCCGCGTaGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCG +
Preference number: 3 (lower is better)
Translates to: GGPERPKALKAA*PAPLSTAKAPA
Trigger: CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTTGGGACGCTCAGGGCCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 72 bp AGCGGGCGGGGCACCGAGGGGCGGCCGGACGCTGACTaGCGCCTCTGCAGGTCCTGGAACGCCTCCACATCG +
Preference number: 3 (lower is better)
Translates to: SGRGTEGRPDAD*RLCRSWNASTS
Trigger: CGATGTGGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGTGCCCCGCCCGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp ACGCGGCTGGGCGGCGGCGCGCCCTGCGGGAGCAGCTaGAGCAAATGCATCGGGAGAGGACGGAGCGGCTGC +
Preference number: 3 (lower is better)
Translates to: TRLGGGAPCGSS*SKCIGRGRSGC
Trigger: GCAGCCGCTCCGTCCTCTCCCGATGCATTTGCTCCAGCTGCTCCCGCAGGGCGCGCCGCCGCCCAGCCGCGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp GCCAGGCTTGGCTTCCGGGTGCCCTCCGGGGTCGGGTaGGGCGGCCCTGAGCGTCCCAAGGCCTTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: ARLGFRVPSGVG*GGPERPKALKA
Trigger: GGCCTTCAAGGCCTTGGGACGCTCAGGGCCGCCCCACCCGACCCCGGAGGGCACCCGGAAGCCAAGCCTGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 72 bp GTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTaGCGGGTTCACCCCGTGGGGCTCCCGCCCAGTCCG +
Preference number: 3 (lower is better)
Translates to: VLERLHIARNRH*RVHPVGLPPSP
Trigger: CGGACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp ACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTaGGGCTCCCGCCCAGTCCGGCTCAACTCCCGCCAC +
Preference number: 3 (lower is better)
Translates to: TSPGTATAGFTP*GSRPVRLNSRH
Trigger: GTGGCGGGAGTTGAGCCGGACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp GGGCGGCCGGACGCTGACTGCCGCCTCTGCAGGTCCTaGAACGCCTCCACATCGCCAGGAACCGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: GRPDADCRLCRS*NASTSPGTATA
Trigger: GGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CAA 90 bp AAAACCTGCCTTCCCAAGATGCCCTTGAAGGGCTGGGCTCGGACCCGCACCTGGGAGCGTCCCAAGGCCTaGAAGGCCGCGTGGCCGGCG +
Preference number: 3 (lower is better)
Translates to: KTCLPKMPLKGWARTRTWERPKA*KAAWPA
Trigger: CGCCGGCCACGCGGCCTTCAAGGCCTTGGGACGCTC...CCAGGTGCGGGTCCGAGCCCAGCCCTTCAAGGGCATCTTGGGAAGGCAGGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CAA 90 bp TGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGGGAGGTGGGCCAGGCTaGGCTTCCGGGTGCCCTCCG +
Preference number: 3 (lower is better)
Translates to: CGLGKAISHKPGRWLPERGGGPG*ASGCPP
Trigger: CGGAGGGCACCCGGAAGCCAAGCCTGGCCCACCTCC...CCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp CCCAAAACCTGCCTTCCCAAGATGCCCTTGAAGGGCTaGGCTCGGACCCGCACCTGGGCCAGGAGAGAGCAG +
Preference number: 3 (lower is better)
Translates to: PKTCLPKMPLKG*ARTRTWARREQ
Trigger: CTGCTCTCTCCTGGCCCAGGTGCGGGTCCGAGCCCAGCCCTTCAAGGGCATCTTGGGAAGGCAGGTTTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CAA 90 bp AACTGTGACAGCCTGAGGTTCAGACAGCGCCCTCAGGGCACCCCTAGCCATGCACTTCCCAAGATGCCCTaGAAGGGCTGGGCTCGGACC +
Preference number: 3 (lower is better)
Translates to: NCDSLRFRQRPQGTPSHALPKMP*KGWART
Trigger: GGTCCGAGCCCAGCCCTTCAAGGGCATCTTGGGAAG...TGCATGGCTAGGGGTGCCCTGAGGGCGCTGTCTGAACCTCAGGCTGTCACAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR TCA 72 bp ACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTaGAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: TPIAIRGTPAGP*KHRLQSLWAGR
Trigger: TCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 72 bp GAGGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTaGGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTG +
Preference number: 3 (lower is better)
Translates to: EEGDPHSHPRDS*GSLKAQTPKPV
Trigger: CACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 72 bp TGGAACTACTGTGTTCCCCTGGTGCTGAGGATCCCGTaGCTGCGAAGTAGTGCTCGCCCTTCCCAGCACCCT +
Preference number: 3 (lower is better)
Translates to: WNYCVPLVLRIP*LRSSARPSQHP
Trigger: AGGGTGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGAACACAGTAGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp GCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTaGGGCGAGATCAAAGATGCTCCTCAGAGTCAGAAG +
Preference number: 3 (lower is better)
Translates to: AETPQRKRAEAS*GEIKDAPQSQK
Trigger: CTTCTGACTCTGAGGAGCATCTTTGATCTCGCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CAA 90 bp TGGATGCAGAACAGCTCTCCTTCCTCCACAGCTGCAGGGGAGCGGCAACACATCAGCACCCTCTGGTCATaGCTGAGTCCTCAAAGGGAT +
Preference number: 3 (lower is better)
Translates to: WMQNSSPSSTAAGERQHISTLWS*LSPQRD
Trigger: ATCCCTTTGAGGACTCAGCAATGACCAGAGGGTGCT...GATGTGTTGCCGCTCCCCTGCAGCTGTGGAGGAAGGAGAGCTGTTCTGCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 72 bp CTCCCTAAACTTCCTGGCTCTAGTCTAGGTGAACTGTaGATGAGGGGCTGGGACATGAGCTCCCAATACTGG +
Preference number: 3 (lower is better)
Translates to: LPKLPGSSLGEL*MRGWDMSSQYW
Trigger: CCAGTATTGGGAGCTCATGTCCCAGCCCCTCATGCACAGTTCACCTAGACTAGAGCCAGGAAGTTTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp CCTGGCTCTAGTCTAGGTGAACTGTGCATGAGGGGCTaGGACATGAGCTCCCAATACTGGTCTTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: PGSSLGELCMRG*DMSSQYWSFFL
Trigger: GAGGAAGAAAGACCAGTATTGGGAGCTCATGTCCCAGCCCCTCATGCACAGTTCACCTAGACTAGAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR GCA 72 bp GACCTTATGAAATCCCTTTTAACTGGTTTTTATGGATaGAGAACAGCTCTCCTTCCTCCACAGCTGCAGGGG +
Preference number: 3 (lower is better)
Translates to: DLMKSLLTGFYG*RTALLPPQLQG
Trigger: CCCCTGCAGCTGTGGAGGAAGGAGAGCTGTTCTGCATCCATAAAAACCAGTTAAAAGGGATTTCATAAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp TTCAGACCTTATGAAATCCCTTTTAACTGGTTTTTATaGATGCAGAACAGCTCTCCTTCCTCCACAGCTGCA +
Preference number: 3 (lower is better)
Translates to: FRPYEIPFNWFL*MQNSSPSSTAA
Trigger: TGCAGCTGTGGAGGAAGGAGAGCTGTTCTGCATCCATAAAAACCAGTTAAAAGGGATTTCATAAGGTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR-3UTR CAA 90 bp TGCGTTTTCACAGAGAGTGCACCCATTTGGTTACTGTTAGGAATATTCACACGTCAAGATGCAGTATTCTaGGGAAAGTTCTCAATTTCA +
Preference number: 3 (lower is better)
Translates to: CVFTESAPIWLLLGIFTRQDAVF*GKFSIS
Trigger: TGAAATTGAGAACTTTCCCAAGAATACTGCATCTTG...ACGTGTGAATATTCCTAACAGTAACCAAATGGGTGCACTCTCTGTGAAAACGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp GTTCTCAATTTCAGACCTTATGAAATCCCTTTTAACTaGTTTTTATGGATGCAGAACAGCTCTCCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: VLNFRPYEIPFN*FLWMQNSSPSS
Trigger: GGAGGAAGGAGAGCTGTTCTGCATCCATAAAAACCAGTTAAAAGGGATTTCATAAGGTCTGAAATTGAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CCA 72 bp GTAAGACAACAGATGAGAATTACAGAAGTGGGAGGTTaGAGATTGTTTTTGCAGTTTGTGGCAATTATTTCT +
Preference number: 3 (lower is better)
Translates to: VRQQMRITEVGG*RLFLQFVAIIS
Trigger: AGAAATAATTGCCACAAACTGCAAAAACAATCTCCAACCTCCCACTTCTGTAATTCTCATCTGTTGTCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GCGGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCACTGCACTCTGGCAGTaGCTCGGCGGGGCGCGAGGG +
Preference number: 4 (lower is better)
Translates to: AAAPRSRSRSRDASDPARTALWQ*LGGARG
Trigger: CCCTCGCGCCCCGCCGAGTCACTGCCAGAGTGCAGT...GCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCGCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GCCCCACTGAGCCGCGGACGCTCAGCGCTCCGCACCGCCAGGAGGACGCGGCTGGGAGGGGGCGTGGGCTaGGCTTACCCGCCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: APLSRGRSALRTARRTRLGGGVG*AYPPEA
Trigger: GGCTTCGGGCGGGTAAGCGCAGCCCACGCCCCCTCC...CAGCCGCGTCCTCCTGGCGGTGCGGAGCGCTGAGCGTCCGCGGCTCAGTGGGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGAGCGGCTGCTGGAGCTaGACAGCGCGGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KALKAAWPAPLSTAKAPASGCWS*TARPGG
Trigger: GCCGCCTGGCCGCGCTGTGCAGCTCCAGCAGCCGCT...CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGCCAGGAACCGCCACTaGCGGGTTCACCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: KALKAAWPAPLSTAKAPAARNRH*RVHPVG
Trigger: CCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGC...CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GCGGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCCTGGGCCGGGGGACCTaGCCTCCCAAAACCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AAAPRSRSRSRDASDPARLGRGT*PPKTCL
Trigger: AAGGCAGGTTTTGGGAGGGCAGGTCCCCCGGCCCAG...GCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCGCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GCGGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCCGGGTCCCTTTGAAGTaGGCGCACTGCACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AAAPRSRSRSRDASDPARRVPLK*AHCTLA
Trigger: TGCCAGAGTGCAGTGCGCTCACTTCAAAGGGACCCG...GCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GCGGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCCATCCGAGGGACTCCTaGGGGTCCCTGAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: AAAPRSRSRSRDASDPARHPRDS*GSLKAQ
Trigger: CTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATG...GCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp AAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGCACAAGCCTGGGAGGTaGCTCCCGGAGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: KALKAAWPAPLSTAKAPAHKPGR*LPERPL
Trigger: CAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTG...CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp ACCGAGGGGCGGCCGGACGCTGACTGCCGCCTCTGCAGGTCCTGGAACGCCTCCACCCCTAGAAGGCGGTaGGGCCACAAGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: TEGRPDADCRLCRSWNASTPRRR*GHKEPA
Trigger: CGCAGGCTCCTTGTGGCCCCACCGCCTTCTAGGGGT...GGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp AGGAGGTGGGCCAGGCTTGGCTTCCGGGTGCCCTCCGGGGTCGGGTGGGGCGGCGATGGGGCAGGCTGTTaGCAGGCACACCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: RRWARLGFRVPSGVGWGGDGAGC*QAHLTG
Trigger: ACCTGTCAGGTGTGCCTGCCAACAGCCTGCCCCATC...GCCGCCCCACCCGACCCCGGAGGGCACCCGGAAGCCAAGCCTGGCCCACCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GCCCCACTGAGCCGCGGACGCTCAGCGCTCCGCACCGCCAGGAGGACGCGGCTGCGCCCCTGGAAGTCGTaGGAGATGCCTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: APLSRGRSALRTARRTRLRPWKS*EMPSYS
Trigger: GCTGTATGAAGGCATCTCCCACGACTTCCAGGGGCG...CAGCCGCGTCCTCCTGGCGGTGCGGAGCGCTGAGCGTCCGCGGCTCAGTGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp ACCGAGGGGCGGCCGGACGCTGACTGCCGCCTCTGCAGGTCCTGGAACGCCTCCCGCCTCTGCAGGTCCTaGAACGCCTCCACATCGCCA +
Preference number: 4 (lower is better)
Translates to: TEGRPDADCRLCRSWNASRLCRS*NASTSP
Trigger: TGGCGATGTGGAGGCGTTCCAGGACCTGCAGAGGCG...GGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GCCCCACTGAGCCGCGGACGCTCAGCGCTCCGCACCGCCAGGAGGACGCGGCTGGTAACGCGTCTATGTTaGGCTGCCGTGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: APLSRGRSALRTARRTRLVTRLC*AAVTWW
Trigger: CCACCATGTCACGGCAGCTCAACATAGACGCGTTAC...CAGCCGCGTCCTCCTGGCGGTGCGGAGCGCTGAGCGTCCGCGGCTCAGTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp CGGGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGAGCGTCCCAAGGCCTTaGAGGCCGCGTGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: RVSSLGLMGTPGQSGSGRSVPRP*RPRGRR
Trigger: GCGCCGGCCACGCGGCCTTCAAGGCCTTGGGACGCT...CCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GCGGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCGAGGAGGCTCTTCAGTaGAGCACCTTCCACACTACA +
Preference number: 4 (lower is better)
Translates to: AAAPRSRSRSRDASDPAREEALQ*STFHTT
Trigger: TGTAGTGTGGAAGGTGCTTCACTGAAGAGCCTCCTC...GCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp CCCAGTCCGGCTCAACTCCCGCCACAGGCAAGACCCCTAGAAGGCGGTGGGGCCAGGCACCCAGCACCGTaGCCCTTCTCACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSPAQLPPQARPLEGGGARHPAP*PFSLPG
Trigger: GCCTGGGAGTGAGAAGGGTCACGGTGCTGGGTGCCT...GGCCCCACCGCCTTCTAGGGGTCTTGCCTGTGGCGGGAGTTGAGCCGGACTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GCCCCACTGAGCCGCGGACGCTCAGCGCTCCGCACCGCCAGGAGGACGCGGCTGTTTCTTCTCTGGGCCTaGTGGGCACACCAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: APLSRGRSALRTARRTRLFLLWA*WAHQGK
Trigger: TTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAA...CAGCCGCGTCCTCCTGGCGGTGCGGAGCGCTGAGCGTCCGCGGCTCAGTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp CCCAGTCCGGCTCAACTCCCGCCACAGGCAAGACCCCTAGAAGGCGGTGGGGCCCCCTGGCCTCCGAAATaGCAAGCCGCTCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSPAQLPPQARPLEGGGAPWPPK*QAALSP
Trigger: TGGGGAGAGAGCGGCTTGTCATTTCGGAGGCCAGGG...GGCCCCACCGCCTTCTAGGGGTCTTGCCTGTGGCGGGAGTTGAGCCGGACTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp ACCGAGGGGCGGCCGGACGCTGACTGCCGCCTCTGCAGGTCCTGGAACGCCTCCCTCAGAGTCAGAAGGTaGAGACACACGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TEGRPDADCRLCRSWNASLRVRR*RHTGAR
Trigger: TCTGGCCCCCGTGTGTCTTCACCTTCTGACTCTGAG...GGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp AACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCTTCCCAAGATGCCCTTaGAGGGCTGGGCTCGGACCC +
Preference number: 4 (lower is better)
Translates to: NASTSPGTATAGFTPWGSFPRCP*RAGLGP
Trigger: GGGTCCGAGCCCAGCCCTTCAAGGGCATCTTGGGAA...GGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp CAGGATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTGGGGCGGGAGTGGCCGGTGCTaGGGAACCCAGGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: QDQKAETPQRKRAEASWGGSGRC*GTQAPS
Trigger: GCTGGGTGCCTGGGTTCCTCAGCACCGGCCACTCCC...GCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp ACCGAGGGGCGGCCGGACGCTGACTGCCGCCTCTGCAGGTCCTGGAACGCCTCCGCGTCTATGTTGAGCTaGCGTGACATGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TEGRPDADCRLCRSWNASASMLS*RDMVAR
Trigger: CCTGGCCACCATGTCACGGCAGCTCAACATAGACGC...GGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AGGAGGTGGGCCAGGCTTGGCTTCCGGGTGCCCTCCGGGGTCGGGTGGGGCGGCCCATCGACCCATACTTaGGGTACCATTCACAGCGCA +
Preference number: 4 (lower is better)
Translates to: RRWARLGFRVPSGVGWGGPSTHT*GTIHSA
Trigger: TGCGCTGTGAATGGTACCGCAAGTATGGGTCGATGG...GCCGCCCCACCCGACCCCGGAGGGCACCCGGAAGCCAAGCCTGGCCCACCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp CAGGATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTGGGGCCGGCTCTGCAGCGGCTaGTGGAGCTGCACAGCGCGG +
Preference number: 4 (lower is better)
Translates to: QDQKAETPQRKRAEASWGRLCSG*WSCTAR
Trigger: CCGCGCTGTGCAGCTCCAGCAGCCGCTGCAGAGCCG...GCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGTGCCCTCCCAAAACCTaGCTTCCCAAGATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KALKAAWPAPLSTAKAPACPPKT*LPKMPL
Trigger: CAAGGGCATCTTGGGAAGGCAGGTTTTGGGAGGGCA...CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp CCCAGTCCGGCTCAACTCCCGCCACAGGCAAGACCCCTAGAAGGCGGTGGGGCCGCAAAGGCTGGCCCCTaGGGTCTGCAGGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PSPAQLPPQARPLEGGGAAKAGP*GLQVPS
Trigger: AGAGGGAACCTGCAGACCCCAGGGGCCAGCCTTTGC...GGCCCCACCGCCTTCTAGGGGTCTTGCCTGTGGCGGGAGTTGAGCCGGACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTGCACCTTGGAAGGGGCTaGCTTGGGGGCGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GFFSGPDGHTRAKWEWPVHLGRG*LGGGWG
Trigger: CCCCCACCCGCCCCCAAGTCAGCCCCTTCCAAGGTG...CACCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GCCCCACTGAGCCGCGGACGCTCAGCGCTCCGCACCGCCAGGAGGACGCGGCTGCCCTCTGGTCATTGCTaGGTCCTCAAAGGGATGATT +
Preference number: 4 (lower is better)
Translates to: APLSRGRSALRTARRTRLPSGHC*VLKGMI
Trigger: AATCATCCCTTTGAGGACTCAGCAATGACCAGAGGG...CAGCCGCGTCCTCCTGGCGGTGCGGAGCGCTGAGCGTCCGCGGCTCAGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp AAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGCTCAGAGTGCAAGGTaGAAAGGTCAAGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KALKAAWPAPLSTAKAPAAQSAR*KGQGSQ
Trigger: CTGAGACCCTTGACCTTTTCACCTTGCACTCTGAGC...CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AGGAGGTGGGCCAGGCTTGGCTTCCGGGTGCCCTCCGGGGTCGGGTGGGGCGGCCAATGCGGCACATCTTaGAGGAGACCAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RRWARLGFRVPSGVGWGGQCGTS*RRPVLA
Trigger: AGCAAGAACTGGTCTCCTGCAAGATGTGCCGCATTG...GCCGCCCCACCCGACCCCGGAGGGCACCCGGAAGCCAAGCCTGGCCCACCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCTCGGGGATCAAGCAGTaGGAAGGCCCCGTTCTTGCG +
Preference number: 4 (lower is better)
Translates to: NASTSPGTATAGFTPWGSSGIKQ*EGPVLA
Trigger: CGCAAGAACGGGGCCTTCGCACTGCTTGATCCCCGA...GGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGTCAGAAAGGCCTGAATaGAACCTCAGGGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: KALKAAWPAPLSTAKAPASERPE*NLRDRE
Trigger: CTCCCTGTCCCTGAGGTTGCATTCAGGCCTTTCTGA...CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp CCCAGTCCGGCTCAACTCCCGCCACAGGCAAGACCCCTAGAAGGCGGTGGGGCCGTGCTGAGGATCCCGTaGCTGCGAAGTAGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: PSPAQLPPQARPLEGGGAVLRIP*LRSSAR
Trigger: GCGAGCACTACTTCGCAGGCACGGGATCCTCAGCAC...GGCCCCACCGCCTTCTAGGGGTCTTGCCTGTGGCGGGAGTTGAGCCGGACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AACTGTGACAGCCTGAGGTTCAGACAGCGCCCTCAGGGCACCCCTAGCCATGCAGGCGGCGGCGCGCCCTaGGGGAGCAGCTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: NCDSLRFRQRPQGTPSHAGGGAP*GSSWSK
Trigger: TTTGCTCCAGCTGCTCCCGCAGGGCGCGCCGCCGCC...TGCATGGCTAGGGGTGCCCTGAGGGCGCTGTCTGAACCTCAGGCTGTCACAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AAAACCTGCCTTCCCAAGATGCCCTTGAAGGGCTGGGCTCGGACCCGCACCTGGAGGTGTGCCAGGTGCTaGCCCGCCCGCCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: KTCLPKMPLKGWARTRTWRCARC*PARPTE
Trigger: CTCAGTGGGGCGGGCGGGGCAGCACCTGGCACACCT...CCAGGTGCGGGTCCGAGCCCAGCCCTTCAAGGGCATCTTGGGAAGGCAGGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp CAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGGGCTTGGCTTCCGGGTaGCCTCCGGGGTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QSMIKGEPQRSAPAVAKLGLASG*PPGSGG
Trigger: CCCACCCGACCCCGGAGGGCACCCGGAAGCCAAGCC...CAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp CAGGATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTGGGGCAGATGCCAGCGACCCTaGGCGCCGAGGTATCCGGGC +
Preference number: 4 (lower is better)
Translates to: QDQKAETPQRKRAEASWGRCQRP*APRYPG
Trigger: GCCCGGATACCTCGGCGCGCAGGGTCGCTGGCATCT...GCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp ACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGGAGCCGGAGCCGAGATaGCAGCGACCCTGCGCGCCG +
Preference number: 4 (lower is better)
Translates to: TQSMIKGEPQRSAPAVAKEPEPR*QRPCAP
Trigger: CGGCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTC...CTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTGGAGGTGGGCCAGGCTTaGCTTCCGGGTGCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GFFSGPDGHTRAKWEWPVEVGQA*LPGALR
Trigger: CCGGAGGGCACCCGGAAGCCAAGCCTGGCCCACCTC...CACCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp CCCAGTCCGGCTCAACTCCCGCCACAGGCAAGACCCCTAGAAGGCGGTGGGGCCGAATCAGGCAAAGGCTaGCCCCTGGGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSPAQLPPQARPLEGGGAESGKG*PLGSAG
Trigger: ACCTGCAGACCCCAGGGGCCAGCCTTTGCCTGATTC...GGCCCCACCGCCTTCTAGGGGTCTTGCCTGTGGCGGGAGTTGAGCCGGACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GCGGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCATGAGCTCCCAATACTaGTCTTTCTTCCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AAAPRSRSRSRDASDPARMSSQY*SFFLRL
Trigger: GAGCCTGAGGAAGAAAGACCAGTATTGGGAGCTCAT...GCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp ACCGAGGGGCGGCCGGACGCTGACTGCCGCCTCTGCAGGTCCTGGAACGCCTCCCCCCTAGCCATGCACTaGGACTCCCTAAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: TEGRPDADCRLCRSWNASPLAMH*DSLNFL
Trigger: CAGGAAGTTTAGGGAGTCCCAGTGCATGGCTAGGGG...GGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCCTCGGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp AGAACTTCCTGGAACTACTGTGTTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAGGGGCGGCCGGACGCTaGCTGCCGCCTCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RTSWNYCVPLVLRIPCLRGAAGR*LPPLQV
Trigger: GACCTGCAGAGGCGGCAGTCAGCGTCCGGCCGCCCC...TCGCAGGCACGGGATCCTCAGCACCAGGGGAACACAGTAGTTCCAGGAAGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGGCGAGATCAAAGATaGTCCTCAGAGTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: KALKAAWPAPLSTAKAPAGRDQR*SSESEG
Trigger: ACCTTCTGACTCTGAGGAGCATCTTTGATCTCGCCC...CGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp AACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCGGGTACATTTCCGACTaGAAAGGCGCCTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: NASTSPGTATAGFTPWGSGYISD*KGASGT
Trigger: TGTCCCAGAGGCGCCTTTTCAGTCGGAAATGTACCC...GGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp AACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCTTCCTTTCCAGGACCTaGCCCAGAGGGAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: NASTSPGTATAGFTPWGSFLSRT*PRGKRG
Trigger: TCCTCTCTTCCCTCTGGGCCAGGTCCTGGAAAGGAA...GGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGGGCAGGTGTGCCAGGTaGTGCCCCGCCCGCCCCACT +
Preference number: 4 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGGRCAR*CPARPT
Trigger: AGTGGGGCGGGCGGGGCAGCACCTGGCACACCTGCC...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp TGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCAGGGCTGGGCACCTTaGAAGGGGCTGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: CGLGKAISHKPGRWLPERQGWAP*KGLTWG
Trigger: CCCCCAAGTCAGCCCCTTCCAAGGTGCCCAGCCCTG...CCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGGCCTTGAAGGCCGCGTaGCCGGCGCCCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGALKAA*PAPLST
Trigger: GGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGC...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp ACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGATGCCCTTGAAGGGCTaGGCTCGGACCCGCACCTGG +
Preference number: 4 (lower is better)
Translates to: TQSMIKGEPQRSAPAVAKMPLKG*ARTRTW
Trigger: CCAGGTGCGGGTCCGAGCCCAGCCCTTCAAGGGCAT...CTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp AAAACCTGCCTTCCCAAGATGCCCTTGAAGGGCTGGGCTCGGACCCGCACCTGGGTCTCAGGTTGGGGATaGCAGGGGTGGGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KTCLPKMPLKGWARTRTWVSGWG*QGWVCL
Trigger: CAGGCAGACCCACCCCTGCCATCCCCAACCTGAGAC...CCAGGTGCGGGTCCGAGCCCAGCCCTTCAAGGGCATCTTGGGAAGGCAGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp TGGATGCAGAACAGCTCTCCTTCCTCCACAGCTGCAGGGGAGCGGCAACACATCCAGGGTGGCCACAGCTaGGGGGTGAGCACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: WMQNSSPSSTAAGERQHIQGGHS*GVSTAS
Trigger: GCTTGCTGTGCTCACCCCTCAGCTGTGGCCACCCTG...GATGTGTTGCCGCTCCCCTGCAGCTGTGGAGGAAGGAGAGCTGTTCTGCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGGCTGACTGCCGCCTCTaGAGGTCCTGGAACGCCTCC +
Preference number: 4 (lower is better)
Translates to: KAQTPKPVGRESPNLRRRADCRL*RSWNAS
Trigger: GGAGGCGTTCCAGGACCTGCAGAGGCGGCAGTCAGC...CCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GGGTCTGCAGGTTCCCTCTCAAACCTGGGCCCAAAGTGCTTTTCCTTTCCAGGACGGCCGGACGCTGACTaGCGCCTCTGCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSAGSLSNLGPKCFSFPGRPDAD*RLCRSW
Trigger: CCAGGACCTGCAGAGGCGGCAGTCAGCGTCCGGCCG...TCCTGGAAAGGAAAAGCACTTTGGGCCCAGGTTTGAGAGGGAACCTGCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGCACCGCCAAGGCGCCTaGGGGCTTAAGCGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGHRQGA*GLKRGA
Trigger: TGCGCCGCGCTTAAGCCCGCAGGCGCCTTGGCGGTG...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp AACTGTGACAGCCTGAGGTTCAGACAGCGCCCTCAGGGCACCCCTAGCCATGCACAGTTCTTGCTTCACTaGGGGGCCCAGCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: NCDSLRFRQRPQGTPSHAQFLLH*GAQLPA
Trigger: GGCTGGCAGCTGGGCCCCCCAGTGAAGCAAGAACTG...TGCATGGCTAGGGGTGCCCTGAGGGCGCTGTCTGAACCTCAGGCTGTCACAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTGCCCTGCGGGAGCAGCTaGAGCAAATGCATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GFFSGPDGHTRAKWEWPVPCGSS*SKCIGR
Trigger: TCTCCCGATGCATTTGCTCCAGCTGCTCCCGCAGGG...CACCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACCAGGTCCCTCTGGAGTaGTCTGCCTTGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLGRQYLTSLGGGSRRGHQVPLE*SALAGR
Trigger: CCTCCCAGCCAAGGCAGACCACTCCAGAGGGACCTG...GTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp AACTGTGACAGCCTGAGGTTCAGACAGCGCCCTCAGGGCACCCCTAGCCATGCACACACCAGGGCAAAGTaGGAGTGGCCGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NCDSLRFRQRPQGTPSHAHTRAK*EWPVLR
Trigger: CCTCAGCACCGGCCACTCCCACTTTGCCCTGGTGTG...TGCATGGCTAGGGGTGCCCTGAGGGCGCTGTCTGAACCTCAGGCTGTCACAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp AAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGGCCACAGCTGAGGGGTaGGCACAGCAAGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: KAQTPKPVGRESPNLRRRATAEG*AQQAEC
Trigger: GCACTCTGCTTGCTGTGCTCACCCCTCAGCTGTGGC...CCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp TGGATGCAGAACAGCTCTCCTTCCTCCACAGCTGCAGGGGAGCGGCAACACATCGTTGGCAGGCACACCTaGCAGGTGCATGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WMQNSSPSSTAAGERQHIVGRHT*QVHGWL
Trigger: CAGCCAGCCATGCACCTGTCAGGTGTGCCTGCCAAC...GATGTGTTGCCGCTCCCCTGCAGCTGTGGAGGAAGGAGAGCTGTTCTGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACCTGTGCAGGTCCCTCTaGAGTGGTCTGCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLGRQYLTSLGGGSRRGHLCRSL*SGLPWL
Trigger: CAGCCAAGGCAGACCACTCCAGAGGGACCTGCACAG...GTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GCCCAAGGGCTCCTCAGGGTCAGAGGGAGGAGTCGAAGAGAATTTAGTCCTAAGGCGCCCGGGTCCCTTTaGAGTGAGCGCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: AQGLLRVRGRSRREFSPKAPGSL*SERTAL
Trigger: GAGTGCAGTGCGCTCACTTCAAAGGGACCCGGGCGC...CTTAGGACTAAATTCTCTTCGACTCCTCCCTCTGACCCTGAGGAGCCCTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACACTCCTGCGGGTCCCTaGAAGCACAGACTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VLGRQYLTSLGGGSRRGHTPAGP*KHRLQS
Trigger: GCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGT...GTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp ACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCACACACAGCAGCTTTaGCCCACCAGGAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: TQSMIKGEPQRSAPAVAKHTQQL*PTRRPV
Trigger: AACAGGCCTCCTGGTGGGGCAAAGCTGCTGTGTGTG...CTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp CAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGAGCAGCTGGAGCAAATaGATCGGGAGAGGACGGAGC +
Preference number: 4 (lower is better)
Translates to: QSMIKGEPQRSAPAVAKLSSWSK*IGRGRS
Trigger: GCTCCGTCCTCTCCCGATGCATTTGCTCCAGCTGCT...CAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GGGTCTGCAGGTTCCCTCTCAAACCTGGGCCCAAAGTGCTTTTCCTTTCCAGGAGGAGTGGCACCAGGGTaGCCACAGCTGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSAGSLSNLGPKCFSFPGGVAPG*PQLRGE
Trigger: CTCACCCCTCAGCTGTGGCCACCCTGGTGCCACTCC...TCCTGGAAAGGAAAAGCACTTTGGGCCCAGGTTTGAGAGGGAACCTGCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp AAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGGTGAGAGTGGGGCTTTaGGGTGCAGGGTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: KAQTPKPVGRESPNLRRRVRVGL*GAGWAV
Trigger: AACTGCCCACCCTGCACCCCAAAGCCCCACTCTCAC...CCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp CGGGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGCTTCCCAGCACCCTCTaGTCATTGCTGAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: RVSSLGLMGTPGQSGSGRLPSTL*SLLSPQ
Trigger: TTGAGGACTCAGCAATGACCAGAGGGTGCTGGGAAG...CCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp AACTGTGACAGCCTGAGGTTCAGACAGCGCCCTCAGGGCACCCCTAGCCATGCAAGACTCCAAAGCCTGTaGGCAGGGAGAGCCCAAACC +
Preference number: 4 (lower is better)
Translates to: NCDSLRFRQRPQGTPSHARLQSL*AGRAQT
Trigger: GGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCT...TGCATGGCTAGGGGTGCCCTGAGGGCGCTGTCTGAACCTCAGGCTGTCACAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGGCTCGGACCCGCACCTaGGCCAGGAGAGAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGARTRT*ARREQN
Trigger: GTTCTGCTCTCTCCTGGCCCAGGTGCGGGTCCGAGC...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp CAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGGGAAGTCGTGGGAGATaGCTTCATACAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QSMIKGEPQRSAPAVAKLGSRGR*LHTAGL
Trigger: GAGCCCTGCTGTATGAAGGCATCTCCCACGACTTCC...CAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCCGTTTTCACAGAGAGTaGACCCATTTGGTTACTGTT +
Preference number: 4 (lower is better)
Translates to: NASTSPGTATAGFTPWGSRFHRE*THLVTV
Trigger: AACAGTAACCAAATGGGTGCACTCTCTGTGAAAACG...GGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGGCTGCCGTGACATGGTaGCCAGGGAAGGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGAAVTW*PGKEWH
Trigger: GTGCCACTCCTTCCCTGGCCACCATGTCACGGCAGC...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp CAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGCTGTGCATGAGGGGCTaGGACATGAGCTCCCAATAC +
Preference number: 4 (lower is better)
Translates to: QSMIKGEPQRSAPAVAKLLCMRG*DMSSQY
Trigger: GTATTGGGAGCTCATGTCCCAGCCCCTCATGCACAG...CAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp TGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGGTGGTCTGCCTTGGCTaGGAGGATGAGAAAGATGGG +
Preference number: 4 (lower is better)
Translates to: CGLGKAISHKPGRWLPERVVCLG*EDEKDG
Trigger: CCCATCTTTCTCATCCTCCCAGCCAAGGCAGACCAC...CCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp AGAACTTCCTGGAACTACTGTGTTCCCCTGGTGCTGAGGATCCCGTGCCTGCGACCAGTTTTCGAGTGTTaGGGTAGCGGTACCGCCCCT +
Preference number: 4 (lower is better)
Translates to: RTSWNYCVPLVLRIPCLRPVFEC*GSGTAP
Trigger: AGGGGCGGTACCGCTACCTCAACACTCGAAAACTGG...TCGCAGGCACGGGATCCTCAGCACCAGGGGAACACAGTAGTTCCAGGAAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp CGGGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGGTTCTTGCGGAAGAATaGCTCAATGCGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: RVSSLGLMGTPGQSGSGRVLAEE*LNAAHL
Trigger: AAGATGTGCCGCATTGAGTCATTCTTCCGCAAGAAC...CCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp CTCCCTAAACTTCCTGGCTCTAGTCTAGGTGAACTGTGCATGAGGGGCTGGGACCTCCTGTGGTGGTCTTaGGGAAGGGGCTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPKLPGSSLGELCMRGWDLLWWS*GRGCAG
Trigger: ACCTGCACAGCCCCTTCCTCAAGACCACCACAGGAG...GTCCCAGCCCCTCATGCACAGTTCACCTAGACTAGAGCCAGGAAGTTTAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp ACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGAGTCTAGGTGAACTGTaGATGAGGGGCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: TQSMIKGEPQRSAPAVAKSLGEL*MRGWDM
Trigger: CATGTCCCAGCCCCTCATGCACAGTTCACCTAGACT...CTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGCTGAAAAGGCGCCTCTaGGACAGGGCTGGGCACCTT +
Preference number: 4 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGLKRRL*DRAGHL
Trigger: AAGGTGCCCAGCCCTGTCCCAGAGGCGCCTTTTCAG...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTGGTTCCCTCTCAAACCTaGGCCCAAAGTGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GFFSGPDGHTRAKWEWPVVPSQT*AQSAFP
Trigger: AGGAAAAGCACTTTGGGCCCAGGTTTGAGAGGGAAC...CACCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CAA 72 bp GAGTCCCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTaGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ESPESREEDAAV*GRQYLTSLGGG
Trigger: GCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGTATGTTGAGCTGCCGTaGCATGGTGGCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGYVELP*HGGQGR
Trigger: CCTTCCCTGGCCACCATGTCACGGCAGCTCAACATA...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GAGGTTGGAGATTGTTTTTGCAGTTTGTGGCAATTATTTCTAAAGGCCCAGGAGGCGCGGCGCAGCAGGTaGCGGCTCTGCAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EVGDCFCSLWQLFLKAQEARRSR*RLCSGC
Trigger: GCAGCCGCTGCAGAGCCGTCACCTGCTGCGCCGCGC...CTCCTGGGCCTTTAGAAATAATTGCCACAAACTGCAAAAACAATCTCCAACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTGCTGATTGATGAACTGTaGCAGCCTGAGGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: GFFSGPDGHTRAKWEWPVLIDEL*QPEVQT
Trigger: TGTCTGAACCTCAGGCTGTCACAGTTCATCAATCAG...CACCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTGTCCTTCCAGAAGTTCTaGCGTAACGCGTCTATGTTG +
Preference number: 4 (lower is better)
Translates to: GFFSGPDGHTRAKWEWPVSFQKF*RNASML
Trigger: CAACATAGACGCGTTACGGCAGAACTTCTGGAAGGA...CACCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp CAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGGAATTTAGTCCTAAGTaGCAGGGAAAGGCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: QSMIKGEPQRSAPAVAKLEFSPK*QGKASP
Trigger: GGGACTCGCCTTTCCCTGGCACTTAGGACTAAATTC...CAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCAAACTCTTTGAAAGATaGGTTTTCACAGAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: NASTSPGTATAGFTPWGSKLFER*VFTESA
Trigger: TGCACTCTCTGTGAAAACGCATCTTTCAAAGAGTTT...GGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GCCCAAGGGCTCCTCAGGGTCAGAGGGAGGAGTCGAAGAGAATTTAGTCCTAAGAGAGCCGAGGCCTCCTaGGGCGAGATCAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: AQGLLRVRGRSRREFSPKRAEAS*GEIKDA
Trigger: AGCATCTTTGATCTCGCCCCAGGAGGCCTCGGCTCT...CTTAGGACTAAATTCTCTTCGACTCCTCCCTCTGACCCTGAGGAGCCCTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp AGAACTTCCTGGAACTACTGTGTTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGGTGCATGGCTGGCTaGTTGATGAACTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: RTSWNYCVPLVLRIPCLRRCMAG*LMNCDS
Trigger: GCTGTCACAGTTCATCAATCAGCCAGCCATGCACCT...TCGCAGGCACGGGATCCTCAGCACCAGGGGAACACAGTAGTTCCAGGAAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGGGAGGAGTTTTGGGGTaGCAGGTAGCTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGGGVLG*QVAQSA
Trigger: TGCACTCTGAGCTACCTGGCACCCCAAAACTCCTCC...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp CAGGATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTGGGGCACTGGTTTTTATGGATaGAGAACAGCTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QDQKAETPQRKRAEASWGTGFYG*RTALLP
Trigger: AGGAAGGAGAGCTGTTCTGCATCCATAAAAACCAGT...GCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GCCCAAGGGCTCCTCAGGGTCAGAGGGAGGAGTCGAAGAGAATTTAGTCCTAAGGGCTCGGGTGATAGGTaGTACCGGGTACATTTCCGA +
Preference number: 4 (lower is better)
Translates to: AQGLLRVRGRSRREFSPKGSGDR*YRVHFR
Trigger: TCGGAAATGTACCCGGTACCACCTATCACCCGAGCC...CTTAGGACTAAATTCTCTTCGACTCCTCCCTCTGACCCTGAGGAGCCCTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp TGGATGCAGAACAGCTCTCCTTCCTCCACAGCTGCAGGGGAGCGGCAACACATCGAGGTATCGCGTCTCTaGCATGTCCAGTTTTCGAGT +
Preference number: 4 (lower is better)
Translates to: WMQNSSPSSTAAGERQHIEVSRL*HVQFSS
Trigger: ACTCGAAAACTGGACATGCCAGAGACGCGATACCTC...GATGTGTTGCCGCTCCCCTGCAGCTGTGGAGGAAGGAGAGCTGTTCTGCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp GAGGTTGGAGATTGTTTTTGCAGTTTGTGGCAATTATTTCTAAAGGCCCAGGAGCGGGTGGGGCGGCCCTaGGCGTCCCAAGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: EVGDCFCSLWQLFLKAQERVGRP*ASQGLE
Trigger: TTCAAGGCCTTGGGACGCTCAGGGCCGCCCCACCCG...CTCCTGGGCCTTTAGAAATAATTGCCACAAACTGCAAAAACAATCTCCAACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGCGAAGGCCCCGTTCTTaGGGAAGAATGACTCAATGC +
Preference number: 4 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGRRPRS*GRMTQC
Trigger: GCATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCG...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR TCA 90 bp CTCCCTAAACTTCCTGGCTCTAGTCTAGGTGAACTGTGCATGAGGGGCTGGGACAGTTTCAGAAAGGCCTaGATGCAACCTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LPKLPGSSLGELCMRGWDSFRKA*MQPQGQ
Trigger: CTGTCCCTGAGGTTGCATTCAGGCCTTTCTGAAACT...GTCCCAGCCCCTCATGCACAGTTCACCTAGACTAGAGCCAGGAAGTTTAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp AAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGAGCAAGAGGGCAACTTaGAGGTCTGATAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KAQTPKPVGRESPNLRRRSKRAT*RSDSFR
Trigger: TCTGAAACTATCAGACCTGCAAGTTGCCCTCTTGCT...CCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp CTCCCTAAACTTCCTGGCTCTAGTCTAGGTGAACTGTGCATGAGGGGCTGGGACAACCTGGGCCCAAAGTaGTTTTCCTTTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: LPKLPGSSLGELCMRGWDNLGPK*FSFPGP
Trigger: AGGTCCTGGAAAGGAAAAGCACTTTGGGCCCAGGTT...GTCCCAGCCCCTCATGCACAGTTCACCTAGACTAGAGCCAGGAAGTTTAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp TGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGGAGAGTGCACCCATTTaGTTACTGTTAGGAATATTC +
Preference number: 4 (lower is better)
Translates to: CGLGKAISHKPGRWLPERESAPI*LLLGIF
Trigger: GAATATTCCTAACAGTAACCAAATGGGTGCACTCTC...CCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp TGCGTTTTCACAGAGAGTGCACCCATTTGGTTACTGTTAGGAATATTCACACGTCTGGCCCCTGGGGTCTaGAGGTTCCCTCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: CVFTESAPIWLLLGIFTRLAPGV*RFPLKP
Trigger: AGGTTTGAGAGGGAACCTGCAGACCCCAGGGGCCAG...ACGTGTGAATATTCCTAACAGTAACCAAATGGGTGCACTCTCTGTGAAAACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACGAAATCCCTTTTAACTaGTTTTTATGGATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: VLGRQYLTSLGGGSRRGHEIPFN*FLWMQN
Trigger: GTTCTGCATCCATAAAAACCAGTTAAAAGGGATTTC...GTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GGGTCTGCAGGTTCCCTCTCAAACCTGGGCCCAAAGTGCTTTTCCTTTCCAGGAACAGAAGTGGGAGGTTaGAGATTGTTTTTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GSAGSLSNLGPKCFSFPGTEVGG*RLFLQF
Trigger: AAACTGCAAAAACAATCTCCAACCTCCCACTTCTGT...TCCTGGAAAGGAAAAGCACTTTGGGCCCAGGTTTGAGAGGGAACCTGCAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GAGGTTGGAGATTGTTTTTGCAGTTTGTGGCAATTATTTCTAAAGGCCCAGGAGGCAGCCTTAGCCTTCTaGTTGGCCTTCACCATCGAC +
Preference number: 4 (lower is better)
Translates to: EVGDCFCSLWQLFLKAQEAALAF*LAFTID
Trigger: GTCGATGGTGAAGGCCAAGCAGAAGGCTAAGGCTGC...CTCCTGGGCCTTTAGAAATAATTGCCACAAACTGCAAAAACAATCTCCAACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CCA 90 bp GGGTCTGCAGGTTCCCTCTCAAACCTGGGCCCAAAGTGCTTTTCCTTTCCAGGATTTAACTGGTTTTTATaGATGCAGAACAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSAGSLSNLGPKCFSFPGFNWFL*MQNSSP
Trigger: AGGAGAGCTGTTCTGCATCCATAAAAACCAGTTAAA...TCCTGGAAAGGAAAAGCACTTTGGGCCCAGGTTTGAGAGGGAACCTGCAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR GCA 90 bp GAGGTTGGAGATTGTTTTTGCAGTTTGTGGCAATTATTTCTAAAGGCCCAGGAGGGAAGAATGACTCAATaGGGCACATCTTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EVGDCFCSLWQLFLKAQEGRMTQ*GTSCRR
Trigger: TCTCCTGCAAGATGTGCCGCATTGAGTCATTCTTCC...CTCCTGGGCCTTTAGAAATAATTGCCACAAACTGCAAAAACAATCTCCAACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609480.4
3UTR CAA 72 bp CAACAGATGAGAATTACAGAAGTGGGAGGTTGGAGATaGTTTTTGCAGTTTGTGGCAATTATTTCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: QQMRITEVGGWR*FLQFVAIISKG
Trigger: GCCTTTAGAAATAATTGCCACAAACTGCAAAAACAATCTCCAACCTCCCACTTCTGTAATTCTCATCTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp GCCCCACTGAGCCGCGGACGCTCAGCGCTCCGCACCGCCAGGAGGACGCGGCTGGAGCGTCCCAAGGCCTaGAAGGCCGCGTGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: APLSRGRSALRTARRTRLERPKA*KAAWPA
Trigger: CGCCGGCCACGCGGCCTTCAAGGCCTTGGGACGCTC...CAGCCGCGTCCTCCTGGCGGTGCGGAGCGCTGAGCGTCCGCGGCTCAGTGGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp GCGGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCTCAATGCGGCACATCTaGCAGGAGACCAGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: AAAPRSRSRSRDASDPARSMRHI*QETSSC
Trigger: GCAAGAACTGGTCTCCTGCAAGATGTGCCGCATTGA...GCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp AAAACCTGCCTTCCCAAGATGCCCTTGAAGGGCTGGGCTCGGACCCGCACCTGGGGAGGTGGGCCAGGCTaGGCTTCCGGGTGCCCTCCG +
Preference number: 5 (lower is better)
Translates to: KTCLPKMPLKGWARTRTWGGGPG*ASGCPP
Trigger: CGGAGGGCACCCGGAAGCCAAGCCTGGCCCACCTCC...CCAGGTGCGGGTCCGAGCCCAGCCCTTCAAGGGCATCTTGGGAAGGCAGGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp CATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGATGGGGCAGGCTGTaGGCAGGCACACCTGACAGG +
Preference number: 5 (lower is better)
Translates to: HPRDSCGSLKAQTPKPVGRWGRL*AGTPDR
Trigger: CCTGTCAGGTGTGCCTGCCAACAGCCTGCCCCATCT...GCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp GGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGTGCCTCCTGTGGTGGTCTaGAGGAAGGGGCTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GFFSGPDGHTRAKWEWPVPPVVV*RKGLCR
Trigger: CCTGCACAGCCCCTTCCTCAAGACCACCACAGGAGG...CACCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CCA 90 bp TTGAGCTGCCGTGACATGGTGGCCAGGGAAGGAGTGGCACCAGGGTaGCCACAGCTGAGGGGTGAGCACAGCAAGCAGAGTGCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: LSCRDMVAREGVAPG*PQLRGEHSKQSASD
Trigger: GTCAGAAGCACTCTGCTTGCTGTGCTCACCCCTCAGCTGTGGCCACCCTGGTGCCACTCCTTCCCTGGCCACCATGTCACGGCAGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp TCCGGGGCCCCCAGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCCTGGAGTGCCATAAGCTTTTTATaGTTCCATCATGCACATGAG +
Preference number: 5 (lower is better)
Translates to: SGAPRPGARSARAAGPWSAISFL*FHHAHE
Trigger: CTCATGTGCATGATGGAACAATAAAAAGCTTATGGC...ACTCCAGGGCCCTGCAGCCCGTGCGGATCGCGCTCCAGGCCTGGGGGCCCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp CAGGATCAGAAAGCGGAGACCCCTCAGCGTAAGAGAGCCGAGGCCTCCTGGGGCCGTAACGCGTCTATGTaGAGCTGCCGTGACATGGTG +
Preference number: 5 (lower is better)
Translates to: QDQKAETPQRKRAEASWGRNASM*SCRDMV
Trigger: CACCATGTCACGGCAGCTCAACATAGACGCGTTACG...GCCCCAGGAGGCCTCGGCTCTCTTACGCTGAGGGGTCTCCGCTTTCTGATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp CCCAGTCCGGCTCAACTCCCGCCACAGGCAAGACCCCTAGAAGGCGGTGGGGCCGTGGGAGGTTGGAGATaGTTTTTGCAGTTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: PSPAQLPPQARPLEGGGAVGGWR*FLQFVA
Trigger: TGCCACAAACTGCAAAAACAATCTCCAACCTCCCAC...GGCCCCACCGCCTTCTAGGGGTCTTGCCTGTGGCGGGAGTTGAGCCGGACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS GCA 90 bp AGGGTGGGCAGTTTGAGGGGCAGGCGGGCTGCAGCCTTAGCCTTCTaGTTGGCCTTCACCATCGACCCATACTTGCGGTACCATTCACAG +
Preference number: 5 (lower is better)
Translates to: RVGSLRGRRAAALAF*LAFTIDPYLRYHSQ
Trigger: CTGTGAATGGTACCGCAAGTATGGGTCGATGGTGAAGGCCAAGCAGAAGGCTAAGGCTGCAGCCCGCCTGCCCCTCAAACTGCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp CGGGTTTCTTCTCTGGGCCTGATGGGCACACCAGGGCAAAGTGGGAGTGGCCGGAGCACCCTCTGGTCATaGCTGAGTCCTCAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: RVSSLGLMGTPGQSGSGRSTLWS*LSPQRD
Trigger: ATCCCTTTGAGGACTCAGCAATGACCAGAGGGTGCT...CCGGCCACTCCCACTTTGCCCTGGTGTGCCCATCAGGCCCAGAGAAGAAACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp AGAACTTCCTGGAACTACTGTGTTCCCCTGGTGCTGAGGATCCCGTGCCTGCGACTTCCCAAGATGCCCTaGAAGGGCTGGGCTCGGACC +
Preference number: 5 (lower is better)
Translates to: RTSWNYCVPLVLRIPCLRLPKMP*KGWART
Trigger: GGTCCGAGCCCAGCCCTTCAAGGGCATCTTGGGAAG...TCGCAGGCACGGGATCCTCAGCACCAGGGGAACACAGTAGTTCCAGGAAGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp GTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACACCATCGACCCATACTaGCGGTACCATTCACAGCGC +
Preference number: 5 (lower is better)
Translates to: VLGRQYLTSLGGGSRRGHTIDPY*RYHSQR
Trigger: GCGCTGTGAATGGTACCGCAAGTATGGGTCGATGGT...GTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp TGGATGCAGAACAGCTCTCCTTCCTCCACAGCTGCAGGGGAGCGGCAACACATCGCCTTAGCCTTCTGCTaGGCCTTCACCATCGACCCA +
Preference number: 5 (lower is better)
Translates to: WMQNSSPSSTAAGERQHIALAFC*AFTIDP
Trigger: TGGGTCGATGGTGAAGGCCAAGCAGAAGGCTAAGGC...GATGTGTTGCCGCTCCCCTGCAGCTGTGGAGGAAGGAGAGCTGTTCTGCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS GCA 90 bp TATTCCTCCTTCCAGAAGTTCTGCCGTAACGCGTCTATGTTGAGCTaGCGTGACATGGTGGCCAGGGAAGGAGTGGCACCAGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: YSSFQKFCRNASMLS*RDMVAREGVAPGWP
Trigger: TGGCCACCCTGGTGCCACTCCTTCCCTGGCCACCATGTCACGGCAGCTCAACATAGACGCGTTACGGCAGAACTTCTGGAAGGAGGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS GCA 90 bp AGAGGGCCAGGTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCTTaGGGAAGAATGACTCAATGCGGCACATCTTGCAGGAGACCAGTT +
Preference number: 5 (lower is better)
Translates to: RGPGLGDQAVRRPRS*GRMTQCGTSCRRPV
Trigger: AACTGGTCTCCTGCAAGATGTGCCGCATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTGCTTGATCCCCGAGACCTGGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CCA 90 bp GAAGTCGTGGGAGATGCCTTCATACAGCAGGGCTCGGGTGATAGGTaGTACCGGGTACATTTCCGACTGAAAAGGCGCCTCTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: EVVGDAFIQQGSGDR*YRVHFRLKRRLWDR
Trigger: CCTGTCCCAGAGGCGCCTTTTCAGTCGGAAATGTACCCGGTACCACCTATCACCCGAGCCCTGCTGTATGAAGGCATCTCCCACGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp AAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGGCGAAGGCCCCGTTCTaGCGGAAGAATGACTCAATG +
Preference number: 5 (lower is better)
Translates to: KAQTPKPVGRESPNLRRRAKAPF*RKNDSM
Trigger: CATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGC...CCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp GCCCAAGGGCTCCTCAGGGTCAGAGGGAGGAGTCGAAGAGAATTTAGTCCTAAGCTACCAGGAGGAGTTTaGGGGTGCCAGGTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: AQGLLRVRGRSRREFSPKLPGGV*GCQVAQ
Trigger: CTGAGCTACCTGGCACCCCAAAACTCCTCCTGGTAG...CTTAGGACTAAATTCTCTTCGACTCCTCCCTCTGACCCTGAGGAGCCCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS TCA 90 bp TCAGATATTCCTCCTTCCAGAAGTTCTGCCGTAACGCGTCTATGTTaGGCTGCCGTGACATGGTGGCCAGGGAAGGAGTGGCACCAGGGT +
Preference number: 5 (lower is better)
Translates to: SDIPPSRSSAVTRLC*AAVTWWPGKEWHQG
Trigger: ACCCTGGTGCCACTCCTTCCCTGGCCACCATGTCACGGCAGCTCAACATAGACGCGTTACGGCAGAACTTCTGGAAGGAGGAATATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS TCA 90 bp GTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCTTGCGGAAGAATaGCTCAATGCGGCACATCTTGCAGGAGACCAGTTCTTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: VSGIKQCEGPVLAEE*LNAAHLAGDQFLLH
Trigger: GTGAAGCAAGAACTGGTCTCCTGCAAGATGTGCCGCATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTGCTTGATCCCCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp AAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGGAAGATGCTGCGGTCTaGGGAAGGCAATATCTCACA +
Preference number: 5 (lower is better)
Translates to: KAQTPKPVGRESPNLRRREDAAV*GRQYLT
Trigger: TGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTC...CCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp CATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCTCACACGTCTGTATATaGCACAAGAGAACAAGATGC +
Preference number: 5 (lower is better)
Translates to: HPRDSCGSLKAQTPKPVGSHVCI*HKRTRC
Trigger: GCATCTTGTTCTCTTGTGCAATATACAGACGTGTGA...GCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS GCA 90 bp CAGCGCAACATCTTTTCCCTCAGATATTCCTCCTTCCAGAAGTTCTaGCGTAACGCGTCTATGTTGAGCTGCCGTGACATGGTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QRNIFSLRYSSFQKF*RNASMLSCRDMVAR
Trigger: CCTGGCCACCATGTCACGGCAGCTCAACATAGACGCGTTACGGCAGAACTTCTGGAAGGAGGAATATCTGAGGGAAAAGATGTTGCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS-3UTR CAA 90 bp GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGCAAGATGCAGTATTCTaGGGAAAGTTCTCAATTTCA +
Preference number: 5 (lower is better)
Translates to: VQGRRCCGLGKAISHKPGQDAVF*GKFSIS
Trigger: TGAAATTGAGAACTTTCCCAAGAATACTGCATCTTG...CCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CAA 90 bp GTGGGCAGTTTGAGGGGCAGGCGGGCTGCAGCCTTAGCCTTCTGCTaGGCCTTCACCATCGACCCATACTTGCGGTACCATTCACAGCGC +
Preference number: 6 (lower is better)
Translates to: VGSLRGRRAAALAFC*AFTIDPYLRYHSQR
Trigger: GCGCTGTGAATGGTACCGCAAGTATGGGTCGATGGTGAAGGCCAAGCAGAAGGCTAAGGCTGCAGCCCGCCTGCCCCTCAAACTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS GCA 72 bp AGTTTGAGGGGCAGGCGGGCTGCAGCCTTAGCCTTCTaGTTGGCCTTCACCATCGACCCATACTTGCGGTAC +
Preference number: 6 (lower is better)
Translates to: SLRGRRAAALAF*LAFTIDPYLRY
Trigger: GTACCGCAAGTATGGGTCGATGGTGAAGGCCAAGCAGAAGGCTAAGGCTGCAGCCCGCCTGCCCCTCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CAA 72 bp TTGAGGGGCAGGCGGGCTGCAGCCTTAGCCTTCTGCTaGGCCTTCACCATCGACCCATACTTGCGGTACCAT +
Preference number: 6 (lower is better)
Translates to: LRGRRAAALAFC*AFTIDPYLRYH
Trigger: ATGGTACCGCAAGTATGGGTCGATGGTGAAGGCCAAGCAGAAGGCTAAGGCTGCAGCCCGCCTGCCCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CAA 90 bp CAGAGGGCCAGGTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCTaGCGGAAGAATGACTCAATGCGGCACATCTTGCAGGAGACCAGT +
Preference number: 6 (lower is better)
Translates to: QRARSRGSSSAKAPF*RKNDSMRHILQETS
Trigger: ACTGGTCTCCTGCAAGATGTGCCGCATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTGCTTGATCCCCGAGACCTGGCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS TCA 72 bp CCTCCTTCCAGAAGTTCTGCCGTAACGCGTCTATGTTaGGCTGCCGTGACATGGTGGCCAGGGAAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: PPSRSSAVTRLC*AAVTWWPGKEW
Trigger: CCACTCCTTCCCTGGCCACCATGTCACGGCAGCTCAACATAGACGCGTTACGGCAGAACTTCTGGAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS TCA 72 bp GGTATCGCGTCTCTGGCATGTCCAGTTTTCGAGTGTTaGGGTAGCGGTACCGCCCCTGGAAGTCGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: GIASLACPVFEC*GSGTAPGSRGR
Trigger: TCTCCCACGACTTCCAGGGGCGGTACCGCTACCTCAACACTCGAAAACTGGACATGCCAGAGACGCGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS GCA 72 bp GGTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCTTaGGGAAGAATGACTCAATGCGGCACATCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: GLGDQAVRRPRS*GRMTQCGTSCR
Trigger: CCTGCAAGATGTGCCGCATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTGCTTGATCCCCGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CAA 90 bp CTCAGATATTCCTCCTTCCAGAAGTTCTGCCGTAACGCGTCTATGTaGAGCTGCCGTGACATGGTGGCCAGGGAAGGAGTGGCACCAGGG +
Preference number: 6 (lower is better)
Translates to: LRYSSFQKFCRNASM*SCRDMVAREGVAPG
Trigger: CCCTGGTGCCACTCCTTCCCTGGCCACCATGTCACGGCAGCTCAACATAGACGCGTTACGGCAGAACTTCTGGAAGGAGGAATATCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS GCA 72 bp TTCCAGAAGTTCTGCCGTAACGCGTCTATGTTGAGCTaGCGTGACATGGTGGCCAGGGAAGGAGTGGCACCA +
Preference number: 6 (lower is better)
Translates to: FQKFCRNASMLS*RDMVAREGVAP
Trigger: TGGTGCCACTCCTTCCCTGGCCACCATGTCACGGCAGCTCAACATAGACGCGTTACGGCAGAACTTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CCA 72 bp GGAGATGCCTTCATACAGCAGGGCTCGGGTGATAGGTaGTACCGGGTACATTTCCGACTGAAAAGGCGCCTC +
Preference number: 6 (lower is better)
Translates to: GDAFIQQGSGDR*YRVHFRLKRRL
Trigger: GAGGCGCCTTTTCAGTCGGAAATGTACCCGGTACCACCTATCACCCGAGCCCTGCTGTATGAAGGCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CAA 72 bp TCCTCCTTCCAGAAGTTCTGCCGTAACGCGTCTATGTaGAGCTGCCGTGACATGGTGGCCAGGGAAGGAGTG +
Preference number: 6 (lower is better)
Translates to: SSFQKFCRNASM*SCRDMVAREGV
Trigger: CACTCCTTCCCTGGCCACCATGTCACGGCAGCTCAACATAGACGCGTTACGGCAGAACTTCTGGAAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CAA 72 bp AGGTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCTaGCGGAAGAATGACTCAATGCGGCACATCTTGCAG +
Preference number: 6 (lower is better)
Translates to: RSRGSSSAKAPF*RKNDSMRHILQ
Trigger: CTGCAAGATGTGCCGCATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTGCTTGATCCCCGAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS TCA 72 bp ATCAAGCAGTGCGAAGGCCCCGTTCTTGCGGAAGAATaGCTCAATGCGGCACATCTTGCAGGAGACCAGTTC +
Preference number: 6 (lower is better)
Translates to: IKQCEGPVLAEE*LNAAHLAGDQF
Trigger: GAACTGGTCTCCTGCAAGATGTGCCGCATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTGCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CCA 72 bp GAAGCTGGTGGTGATGGGGAAGAGGTATCGCGTCTCTaGCATGTCCAGTTTTCGAGTGTTGAGGTAGCGGTA +
Preference number: 6 (lower is better)
Translates to: EAGGDGEEVSRL*HVQFSSVEVAV
Trigger: TACCGCTACCTCAACACTCGAAAACTGGACATGCCAGAGACGCGATACCTCTTCCCCATCACCACCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS CAA 90 bp GCTGCAGCCTTAGCCTTCTGCTTGGCCTTCACCATCGACCCATACTaGCGGTACCATTCACAGCGCAACATCTTTTCCCTCAGATATTCC +
Preference number: 6 (lower is better)
Translates to: AAALAFCLAFTIDPY*RYHSQRNIFSLRYS
Trigger: GGAATATCTGAGGGAAAAGATGTTGCGCTGTGAATGGTACCGCAAGTATGGGTCGATGGTGAAGGCCAAGCAGAAGGCTAAGGCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4
CDS GCA 72 bp ATCTTTTCCCTCAGATATTCCTCCTTCCAGAAGTTCTaGCGTAACGCGTCTATGTTGAGCTGCCGTGACATG +
Preference number: 6 (lower is better)
Translates to: IFSLRYSSFQKF*RNASMLSCRDM
Trigger: CATGTCACGGCAGCTCAACATAGACGCGTTACGGCAGAACTTCTGGAAGGAGGAATATCTGAGGGAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609480.4