Pregenerated sensors for ATP6V1E1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131100

Ensembl transcript IDs: ENST00000253413.10, ENST00000399796.6, ENST00000460085.1, ENST00000473248.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	GGGACTGCAGGGCCAAACACCAAATACATCACCTTTAGGCCAGACGGAGAGTGGTGCTGCAGAACCGGCTaGACACTGTCACACTTTCAG	+
Preference number: 2 (lower is better) Translates to: GTAGPNTKYITFRPDGEWCCRTG*TLSHFQ Trigger: CTGAAAGTGTGACAGTGTCCAGCCGGTTCTGCAGCA...CCACTCTCCGTCTGGCCTAAAGGTGATGTATTTGGTGTTTGGCCCTGCAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253413.10 ENST00000399796.6
3UTR-3UTR CCA 90 bp	CAGGGCCAAACACCAAATACATCACCTTTAGGCCAGACGGAGAGTGGAGACCCATGCTGCAGAACCGGCTaGACACTGTCACACTTTCAG	+
Preference number: 2 (lower is better) Translates to: QGQTPNTSPLGQTESGDPCCRTG*TLSHFQ Trigger: CTGAAAGTGTGACAGTGTCCAGCCGGTTCTGCAGCA...TGGGTCTCCACTCTCCGTCTGGCCTAAAGGTGATGTATTTGGTGTTTGGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253413.10 ENST00000399796.6
CDS-3UTR TCA 90 bp	GGGACTGCAGGGCCAAACACCAAATACATCACCTTTAGGCCAGACGGAGAGTGGGCACGTCAGCATCGCTaGGAGCCATGGCGAGAGCAA	+
Preference number: 4 (lower is better) Translates to: GTAGPNTKYITFRPDGEWARQHR*EPWREQ Trigger: TTGCTCTCGCCATGGCTCTCAGCGATGCTGACGTGC...CCACTCTCCGTCTGGCCTAAAGGTGATGTATTTGGTGTTTGGCCCTGCAGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253413.10 ENST00000399796.6
CDS-3UTR GCA 90 bp	GGGACTGCAGGGCCAAACACCAAATACATCACCTTTAGGCCAGACGGAGAGTGGGGCAAAGGGAACCCCTaGGCAGATCTCGGGTTCCTT	+
Preference number: 4 (lower is better) Translates to: GTAGPNTKYITFRPDGEWGKGNP*ADLGFL Trigger: AAGGAACCCGAGATCTGCGCAGGGGTTCCCTTTGCC...CCACTCTCCGTCTGGCCTAAAGGTGATGTATTTGGTGTTTGGCCCTGCAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253413.10 ENST00000399796.6
CDS-3UTR GCA 90 bp	CAGGGCCAAACACCAAATACATCACCTTTAGGCCAGACGGAGAGTGGAGACCCAGGCAAAGGGAACCCCTaGGCAGATCTCGGGTTCCTT	+
Preference number: 4 (lower is better) Translates to: QGQTPNTSPLGQTESGDPGKGNP*ADLGFL Trigger: AAGGAACCCGAGATCTGCGCAGGGGTTCCCTTTGCC...TGGGTCTCCACTCTCCGTCTGGCCTAAAGGTGATGTATTTGGTGTTTGGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253413.10 ENST00000399796.6
CDS CAA 72 bp	TGGTACCCTTTACTCCCGCAGAGGAATGCCCTTGTCTaGGTGTGTAGACTGCGCAACCTAAGCAACAGGCTT	+
Preference number: 6 (lower is better) Translates to: WYPLLPQRNALV*VCRLRNLSNRL Trigger: AAGCCTGTTGCTTAGGTTGCGCAGTCTACACACCAAGACAAGGGCATTCCTCTGCGGGAGTAAAGGGTACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473248.1
CDS CAA 90 bp	AAAGATACATGGTACCCTTTACTCCCGCAGAGGAATGCCCTTGTCTaGGTGTGTAGACTGCGCAACCTAAGCAACAGGCTTGAAAGGAAC	+
Preference number: 6 (lower is better) Translates to: KDTWYPLLPQRNALV*VCRLRNLSNRLERN Trigger: GTTCCTTTCAAGCCTGTTGCTTAGGTTGCGCAGTCTACACACCAAGACAAGGGCATTCCTCTGCGGGAGTAAAGGGTACCATGTATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473248.1
CDS TCA 72 bp	TTTGTCAGATTAGTAGTAGGTGGTCGAGTTAAGACCTaGATTTATATATGCCTGACTCCAAAGCGCCTGCTC	+
Preference number: 6 (lower is better) Translates to: FVRLVVGGRVKT*IYICLTPKRLL Trigger: GAGCAGGCGCTTTGGAGTCAGGCATATATAAATTCAGGTCTTAACTCGACCACCTACTACTAATCTGACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460085.1

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