Pregenerated sensors for ATP6V0D1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000270049Ensembl transcript IDs: ENST00000602476.1, ENST00000602592.1, ENST00000602596.1, ENST00000635000.1, ENST00000653151.1, ENST00000656196.1, ENST00000659360.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCAAGCTTGAGAAGGGCTCGCTCCCTTCTTTACCCCGCCCGCCCTaGAGCGTCAAGTGCAGCAAACCGGGGAAAGCTAGAGAAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: SKLEKGSLPSLPRPP*SVKCSKPGKAREGP Trigger: TGGGCCTTCTCTAGCTTTCCCCGGTTTGCTGCACTTGACGCTGCAGGGCGGGCGGGGTAAAGAAGGGAGCGAGCCCTTCTCAAGCTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000602592.1 ENST00000656196.1 |
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| CDS TCA 90 bp | CAGGGCGGAAGGGAGCAGCCATTAGTGCTAATGAGGCAGGCGGCCTaGAAGCTTTGTACTCTGCAGTGGCTCGCCCACCCAGGGAACAGT | + |
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Preference number: 5 (lower is better) Translates to: QGGREQPLVLMRQAA*KLCTLQWLAHPGNS Trigger: ACTGTTCCCTGGGTGGGCGAGCCACTGCAGAGTACAAAGCTTTCAGGCCGCCTGCCTCATTAGCACTAATGGCTGCTCCCTTCCGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000602596.1 ENST00000635000.1 ENST00000653151.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS CCA 90 bp | TCTGCAGTGGCTCGCCCACCCAGGGAACAGTTCGTTCTGTTTCCTTaGCTTCCAGGAACCCTAGGCAGAAAGGGGTTTGGGGACAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: SAVARPPREQFVLFP*LPGTLGRKGFGDRS Trigger: GCTCCTGTCCCCAAACCCCTTTCTGCCTAGGGTTCCTGGAAGCCAAGGAAACAGAACGAACTGTTCCCTGGGTGGGCGAGCCACTGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000602596.1 ENST00000635000.1 ENST00000653151.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS TCA 90 bp | AGAATTGGGTGTGGTGAACACTTAGCATCTGCTCCACCCCTGGGGTaGTCGTGGCGCTCACATGATCCTGTGACCGGAAGCCTCCACAGG | + |
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Preference number: 5 (lower is better) Translates to: RIGCGEHLASAPPLG*SWRSHDPVTGSLHR Trigger: CCTGTGGAGGCTTCCGGTCACAGGATCATGTGAGCGCCACGATCACCCCAGGGGTGGAGCAGATGCTAAGTGTTCACCACACCCAATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000635000.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS TCA 90 bp | GACCGTGCCTCTCCAGGCAACCTCTGCCTTAGGAAATCCTACAGATaGTTCACAGGAAACACATGGCTGTGCTCTCTGGGGCAGGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: DRASPGNLCLRKSYR*FTGNTWLCSLGQGQ Trigger: TTGCCCCTGCCCCAGAGAGCACAGCCATGTGTTTCCTGTGAATCATCTGTAGGATTTCCTAAGGCAGAGGTTGCCTGGAGAGGCACGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602476.1 |
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| CDS TCA 90 bp | CATCTGCTCCACCCCTGGGGTGATCGTGGCGCTCACATGATCCTGTaGCCGGAAGCCTCCACAGGGTCACTTCATGAACATTTCTCATGT | + |
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Preference number: 5 (lower is better) Translates to: HLLHPWGDRGAHMIL*PEASTGSLHEHFSC Trigger: ACATGAGAAATGTTCATGAAGTGACCCTGTGGAGGCTTCCGGTCACAGGATCATGTGAGCGCCACGATCACCCCAGGGGTGGAGCAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000635000.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS CCA 90 bp | AGTAAGCTCGCCTTAGTTGGCCTCCGGTTCCCTGCCCCCAGACCTTaGTGTTTTCCCTTGATTCAGCTTCAGAATTCAGCACGTATTGGC | + |
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Preference number: 5 (lower is better) Translates to: SKLALVGLRFPAPRP*CFPLIQLQNSARIG Trigger: GCCAATACGTGCTGAATTCTGAAGCTGAATCAAGGGAAAACACCAAGGTCTGGGGGCAGGGAACCGGAGGCCAACTAAGGCGAGCTTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602592.1 |
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| CDS GCA 90 bp | GTTTGTGCACTGGGGCCTTGCGATCCTCTCAAAGCTGATTCAGCCTaGATTCCTTTCCCAGATGGACACGTGTGTGATAAACAGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: VCALGPCDPLKADSA*IPFPDGHVCDKQLC Trigger: GCAGAGCTGTTTATCACACACGTGTCCATCTGGGAAAGGAATGCAGGCTGAATCAGCTTTGAGAGGATCGCAAGGCCCCAGTGCACAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602596.1 ENST00000653151.1 |
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| CDS CCA 90 bp | ACCTTGGTGTTTTCCCTTGATTCAGCTTCAGAATTCAGCACGTATTaGCCTCAAGTTCCCCGCCTCCAGACCCTATTCTCCTACCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: TLVFSLDSASEFSTY*PQVPRLQTLFSYLN Trigger: ATTGAGGTAGGAGAATAGGGTCTGGAGGCGGGGAACTTGAGGCCAATACGTGCTGAATTCTGAAGCTGAATCAAGGGAAAACACCAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602592.1 |
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| CDS GCA 90 bp | GACAAGATGATATGCAGAAGCAGATGGAAGGTAGAAAAACTCCTCTaGATGAATTCAGGGCTCCCTCTGGCTTCAAAGACGGTTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: DKMICRSRWKVEKLL*MNSGLPLASKTVSF Trigger: AAAGGAAACCGTCTTTGAAGCCAGAGGGAGCCCTGAATTCATGCAGAGGAGTTTTTCTACCTTCCATCTGCTTCTGCATATCATCTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635000.1 ENST00000656196.1 |
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| CDS TCA 90 bp | CAATATCAAGTCTCATTGGCTTCATGCAATAAAAATGTACTCCAATaGAGACTGGCCAGCTTCCCATGGAGAGCTGGCTTTTTCCATCAT | + |
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Preference number: 5 (lower is better) Translates to: QYQVSLASCNKNVLQ*RLASFPWRAGFFHH Trigger: ATGATGGAAAAAGCCAGCTCTCCATGGGAAGCTGGCCAGTCTTCATTGGAGTACATTTTTATTGCATGAAGCCAATGAGACTTGATATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000635000.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS GCA 90 bp | ATCTCTTCAATGTCTGGTTTAATATTCTGGTTTAATTCCCATATCTaGTTCTATACTCAACCTGTTTCAACATCACATGTCACAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: ISSMSGLIFWFNSHI*FYTQPVSTSHVTNS Trigger: GCTGTTTGTGACATGTGATGTTGAAACAGGTTGAGTATAGAAGCAGATATGGGAATTAAACCAGAATATTAAACCAGACATTGAAGAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656196.1 ENST00000659360.1 |
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| CDS GCA 72 bp | GATATCTCCCCCACTGGACCTGACCGGGGCATGGGCTaGCCTGTGAGTGCCTCAGCCCTCGTCCATCACTGC | + |
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Preference number: 6 (lower is better) Translates to: DISPTGPDRGMG*PVSASALVHHC Trigger: GCAGTGATGGACGAGGGCTGAGGCACTCACAGGGCAGCCCATGCCCCGGTCAGGTCCAGTGGGGGAGATATC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653151.1 |
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| CDS TCA 72 bp | GGAGGCTGGCCCAGCAGTCTGGAAACTTTCCAAGCTTaGGAAGGGCTCGCTCCCTTCTTTACCCCGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: GGWPSSLETFQA*EGLAPFFTPPA Trigger: GGCGGGCGGGGTAAAGAAGGGAGCGAGCCCTTCTCAAGCTTGGAAAGTTTCCAGACTGCTGGGCCAGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000602592.1 ENST00000602596.1 ENST00000635000.1 ENST00000653151.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS TCA 72 bp | GGCCCGCAGCCAATCCAAGGCACTCTCCCTTTCAACTaGGACGTGGTGGAAGGGGGAGGGTTGTGGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: GPQPIQGTLPFN*DVVEGGGLWGQ Trigger: CTGTCCCCACAACCCTCCCCCTTCCACCACGTCTCAGTTGAAAGGGAGAGTGCCTTGGATTGGCTGCGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602592.1 |
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| CDS GCA 72 bp | CTCCCTTCTTTACCCCGCCCGCCCTGCAGCGTCAAGTaGAGCAAACCGGGGAAAGCTAGAGAAGGCCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LPSLPRPPCSVK*SKPGKAREGPV Trigger: GACTGGGCCTTCTCTAGCTTTCCCCGGTTTGCTGCACTTGACGCTGCAGGGCGGGCGGGGTAAAGAAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000602592.1 ENST00000656196.1 |
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| CDS GCA 72 bp | GAGAAGGGCTCGCTCCCTTCTTTACCCCGCCCGCCCTaGAGCGTCAAGTGCAGCAAACCGGGGAAAGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: EKGSLPSLPRPP*SVKCSKPGKAR Trigger: TCTAGCTTTCCCCGGTTTGCTGCACTTGACGCTGCAGGGCGGGCGGGGTAAAGAAGGGAGCGAGCCCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000602592.1 ENST00000653151.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS CAA 72 bp | AGGAGGCTGGCCCAGCAGTCTGGAAACTTTCCAAGCTaGAGAAGGGCTCGCTCCCTTCTTTACCCCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: RRLAQQSGNFPS*RRARSLLYPAR Trigger: GCGGGCGGGGTAAAGAAGGGAGCGAGCCCTTCTCAAGCTTGGAAAGTTTCCAGACTGCTGGGCCAGCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000602592.1 ENST00000602596.1 ENST00000635000.1 ENST00000653151.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS CAA 72 bp | CCACCCTCTCCCCTGGACAAGGTGGGAACAGGGCCCTaGAAGGGGAGTACACCCAGCCTTGTGCTGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: PPSPLDKVGTGP*KGSTPSLVLMR Trigger: TCTCATCAGCACAAGGCTGGGTGTACTCCCCTTCAAGGGCCCTGTTCCCACCTTGTCCAGGGGAGAGGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602476.1 |
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| CDS CCA 72 bp | GCTAAGGTGAATTGGCGCCCTATGCAGATGAAGGGATaGCCCGTGCTTGGCCCGCAGCCAATCCAAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: AKVNWRPMQMKG*PVLGPQPIQGT Trigger: AGTGCCTTGGATTGGCTGCGGGCCAAGCACGGGCCATCCCTTCATCTGCATAGGGCGCCAATTCACCTTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602592.1 |
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| CDS CAA 90 bp | CTCTGCAGTGGCTCGCCCACCCAGGGAACAGTTCGTTCTGTTTCCTaGGCTTCCAGGAACCCTAGGCAGAAAGGGGTTTGGGGACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LCSGSPTQGTVRSVS*ASRNPRQKGVWGQE Trigger: CTCCTGTCCCCAAACCCCTTTCTGCCTAGGGTTCCTGGAAGCCAAGGAAACAGAACGAACTGTTCCCTGGGTGGGCGAGCCACTGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000602596.1 ENST00000635000.1 ENST00000653151.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS CAA 90 bp | AGACGGTTTCCTTTGCCAACACCAAGGAGTAGGCTCCAGCCTGGGTaGCTGAGAGGACATGGGAGGACTCCTGGGACTTCTTCAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RRFPLPTPRSRLQPG*LRGHGRTPGTSSAQ Trigger: CTGGGCTGAAGAAGTCCCAGGAGTCCTCCCATGTCCTCTCAGCAACCCAGGCTGGAGCCTACTCCTTGGTGTTGGCAAAGGAAACCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635000.1 |
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| CDS TCA 72 bp | CACCCCTGGGGTGATCGTGGCGCTCACATGATCCTGTaGCCGGAAGCCTCCACAGGGTCACTTCATGAACAT | + |
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Preference number: 6 (lower is better) Translates to: HPWGDRGAHMIL*PEASTGSLHEH Trigger: ATGTTCATGAAGTGACCCTGTGGAGGCTTCCGGTCACAGGATCATGTGAGCGCCACGATCACCCCAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000635000.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS TCA 72 bp | TGTGGTGAACACTTAGCATCTGCTCCACCCCTGGGGTaGTCGTGGCGCTCACATGATCCTGTGACCGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: CGEHLASAPPLG*SWRSHDPVTGS Trigger: GCTTCCGGTCACAGGATCATGTGAGCGCCACGATCACCCCAGGGGTGGAGCAGATGCTAAGTGTTCACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000635000.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS TCA 72 bp | TCTGCTCACTGCAGTCTCTGCCTCCCGTGTTACAAGTaGTTCTCCTGCCTCAGCCTCCCGGGTAGGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SAHCSLCLPCYK*FSCLSLPGRWD Trigger: ATCCCACCTACCCGGGAGGCTGAGGCAGGAGAATCACTTGTAACACGGGAGGCAGAGACTGCAGTGAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653151.1 |
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| CDS CCA 72 bp | AAGGGGTTTGGGGACAGGAGCAGGAGTGGGCGGTCTTaGAGAAACCTCAATCGGACCTCAGTTTCCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: KGFGDRSRSGRS*RNLNRTSVSLW Trigger: CCAGAGGGAAACTGAGGTCCGATTGAGGTTTCTCCAAGACCGCCCACTCCTGCTCCTGTCCCCAAACCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000602596.1 ENST00000635000.1 ENST00000653151.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS TCA 72 bp | GCACACACTCAGGTGAAGACAGCTGCTGCCCGTAGGTaGGGTAAGACACTGAGCACCTGTGTGGGAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: AHTQVKTAAARR*GKTLSTCVGGD Trigger: ATCTCCTCCCACACAGGTGCTCAGTGTCTTACCTCACCTACGGGCAGCAGCTGTCTTCACCTGAGTGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653151.1 |
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| CDS CAA 90 bp | AGACGGTTTCCTTTGCCAACACCAAGGAGTAGGCTCCAGCCTGGGTaGCTGAGAGGACATGGGAGGACTCCTGGGACTTCTTCAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RRFPLPTPRSRLQPG*LRGHGRTPGTSSAV Trigger: AACAGCTGAAGAAGTCCCAGGAGTCCTCCCATGTCCTCTCAGCAACCCAGGCTGGAGCCTACTCCTTGGTGTTGGCAAAGGAAACCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656196.1 ENST00000659360.1 |
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| CDS GCA 72 bp | CTGCCTTGTGCCAACCCAGTTTGTGCACTGGGGCCTTaGGATCCTCTCAAAGCTGATTCAGCCTGCATTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPCANPVCALGP*DPLKADSACIP Trigger: AGGAATGCAGGCTGAATCAGCTTTGAGAGGATCGCAAGGCCCCAGTGCACAAACTGGGTTGGCACAAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602596.1 ENST00000653151.1 |
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| CDS TCA 72 bp | TCCGGTTCCCTGCCCCCAGACCTTGGTGTTTTCCCTTaGTTCAGCTTCAGAATTCAGCACGTATTGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGSLPPDLGVFP*FSFRIQHVLAS Trigger: TGAGGCCAATACGTGCTGAATTCTGAAGCTGAATCAAGGGAAAACACCAAGGTCTGGGGGCAGGGAACCGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602592.1 |
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| CDS TCA 72 bp | AGTTTGTGCACTGGGGCCTTGCGATCCTCTCAAAGCTaGTTCAGCCTGCATTCCTTTCCCAGATGGACACGT | + |
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Preference number: 6 (lower is better) Translates to: SLCTGALRSSQS*FSLHSFPRWTR Trigger: ACGTGTCCATCTGGGAAAGGAATGCAGGCTGAATCAGCTTTGAGAGGATCGCAAGGCCCCAGTGCACAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602596.1 ENST00000653151.1 |
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| CDS CCA 72 bp | TTTTTCCACTGCCTTGTGCCAACCCAGTTTGTGCACTaGGGCCTTGCGATCCTCTCAAAGCTGATTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: FFHCLVPTQFVH*GLAILSKLIQP Trigger: AGGCTGAATCAGCTTTGAGAGGATCGCAAGGCCCCAGTGCACAAACTGGGTTGGCACAAGGCAGTGGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000602596.1 ENST00000653151.1 |
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| CDS TCA 72 bp | TCTCCAGGCAACCTCTGCCTTAGGAAATCCTACAGATaGTTCACAGGAAACACATGGCTGTGCTCTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPGNLCLRKSYR*FTGNTWLCSLG Trigger: CCCCAGAGAGCACAGCCATGTGTTTCCTGTGAATCATCTGTAGGATTTCCTAAGGCAGAGGTTGCCTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602476.1 |
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| CDS GCA 72 bp | CTGGGGCCTTGCGATCCTCTCAAAGCTGATTCAGCCTaGATTCCTTTCCCAGATGGACACGTGTGTGATAAA | + |
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Preference number: 6 (lower is better) Translates to: LGPCDPLKADSA*IPFPDGHVCDK Trigger: TTTATCACACACGTGTCCATCTGGGAAAGGAATGCAGGCTGAATCAGCTTTGAGAGGATCGCAAGGCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602596.1 ENST00000653151.1 |
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| CDS CCA 72 bp | AATGGAACACAAGGCATAAATGGGGCTAAGGTGAATTaGCGCCCTATGCAGATGAAGGGATGGCCCGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: NGTQGINGAKVN*RPMQMKGWPVL Trigger: AAGCACGGGCCATCCCTTCATCTGCATAGGGCGCCAATTCACCTTAGCCCCATTTATGCCTTGTGTTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602592.1 |
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| CDS GCA 72 bp | ATTTTCAAACAGTTGCCCTTCAAAGACGGTTTCCTTTaGCAACACCAAGGAGTAGGCTCCAGCCTGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: IFKQLPFKDGFL*QHQGVGSSLGC Trigger: GCAACCCAGGCTGGAGCCTACTCCTTGGTGTTGGCAAAGGAAACCGTCTTTGAAGGGCAACTGTTTGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659360.1 |
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| CDS CCA 72 bp | TTTTCCCTTGATTCAGCTTCAGAATTCAGCACGTATTaGCCTCAAGTTCCCCGCCTCCAGACCCTATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSLDSASEFSTY*PQVPRLQTLFS Trigger: GGAGAATAGGGTCTGGAGGCGGGGAACTTGAGGCCAATACGTGCTGAATTCTGAAGCTGAATCAAGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602592.1 |
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| CDS CAA 72 bp | CATTTTCAAACAGTTGCCCTTCAAAGACGGTTTCCTTaGCCAACACCAAGGAGTAGGCTCCAGCCTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: HFQTVALQRRFP*PTPRSRLQPGL Trigger: CAACCCAGGCTGGAGCCTACTCCTTGGTGTTGGCAAAGGAAACCGTCTTTGAAGGGCAACTGTTTGAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659360.1 |
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| CDS GCA 72 bp | ATATGCAGAAGCAGATGGAAGGTAGAAAAACTCCTCTaGATGAATTCAGGGCTCCCTCTGGCTTCAAAGACG | + |
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Preference number: 6 (lower is better) Translates to: ICRSRWKVEKLL*MNSGLPLASKT Trigger: CGTCTTTGAAGCCAGAGGGAGCCCTGAATTCATGCAGAGGAGTTTTTCTACCTTCCATCTGCTTCTGCATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635000.1 ENST00000656196.1 |
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| CDS CCA 72 bp | AGAAGGACAAAAGAGAAAGATAAACATTACACCCCATaGAACCTCCTTGAACTGTGTCACCACCCGCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: RRTKEKDKHYTP*NLLELCHHPRE Trigger: TTCTCGCGGGTGGTGACACAGTTCAAGGAGGTTCCATGGGGTGTAATGTTTATCTTTCTCTTTTGTCCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635000.1 ENST00000656196.1 |
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| CDS CCA 72 bp | ACTCCAATGAAGACTGGCCAGCTTCCCATGGAGAGCTaGCTTTTTCCATCATGCTGTAAATTATACCATCTG | + |
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Preference number: 6 (lower is better) Translates to: TPMKTGQLPMES*LFPSCCKLYHL Trigger: CAGATGGTATAATTTACAGCATGATGGAAAAAGCCAGCTCTCCATGGGAAGCTGGCCAGTCTTCATTGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000635000.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS CAA 72 bp | AAGAGAAAGATAAACATTACACCCCATGGAACCTCCTaGAACTGTGTCACCACCCGCGAGAAGCATAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: KRKINITPHGTS*NCVTTREKHSE Trigger: TTCACTATGCTTCTCGCGGGTGGTGACACAGTTCAAGGAGGTTCCATGGGGTGTAATGTTTATCTTTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635000.1 ENST00000656196.1 |
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| CDS CAA 90 bp | GAAGGACAAAAGAGAAAGATAAACATTACACCCCATGGAACCTCCTaGAACTGTGTCACCACCCGCGAGAAGCATAGTGAATTCTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: EGQKRKINITPHGTS*NCVTTREKHSEFSQ Trigger: TTGAGAGAATTCACTATGCTTCTCGCGGGTGGTGACACAGTTCAAGGAGGTTCCATGGGGTGTAATGTTTATCTTTCTCTTTTGTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635000.1 ENST00000656196.1 |
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| CDS CCA 72 bp | GCTGGCTTTTTCCATCATGCTGTAAATTATACCATCTaGAATGCGTGGTTTCCAAGTTTACTGAGAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: AGFFHHAVNYTI*NAWFPSLLRER Trigger: TCTCTCTCTCAGTAAACTTGGAAACCACGCATTCCAGATGGTATAATTTACAGCATGATGGAAAAAGCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000635000.1 ENST00000656196.1 ENST00000659360.1 |
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| CDS GCA 72 bp | ATGTCTGGTTTAATATTCTGGTTTAATTCCCATATCTaGTTCTATACTCAACCTGTTTCAACATCACATGTC | + |
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Preference number: 6 (lower is better) Translates to: MSGLIFWFNSHI*FYTQPVSTSHV Trigger: GACATGTGATGTTGAAACAGGTTGAGTATAGAAGCAGATATGGGAATTAAACCAGAATATTAAACCAGACAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656196.1 ENST00000659360.1 |
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