RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP6V0D1 (Homo sapiens)

Ensembl gene IDs: ENSG00000159720

Ensembl transcript IDs: ENST00000290949.8, ENST00000426604.7, ENST00000540149.5, ENST00000561658.5, ENST00000561852.5, ENST00000563064.5, ENST00000563305.1, ENST00000564191.5, ENST00000564615.5, ENST00000564788.1, ENST00000565835.5, ENST00000566322.6, ENST00000567170.5, ENST00000568101.5, ENST00000568298.1, ENST00000568620.5, ENST00000602876.5

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGAGCCAGCTGCGCCAGGCCCTCAGGGTAGAGCCGCCCACAGTGTaGAAAGAGCTTGGCACGGTCCTCTTTGGACAGCTCTGTGCCGAA +
Preference number: 1 (lower is better)
Translates to: PSQLRQALRVEPPTV*KELGTVLFGQLCAE
Trigger: TTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCCTGGCGCAGCTGGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
3UTR GCA 90 bp CCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTaGCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAA +
Preference number: 1 (lower is better)
Translates to: PWLWERPTEGRGGSN*PQAPGFSGQGVREE
Trigger: TTCCTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR CCA 90 bp CCCCAGGCCCCAAGGACACACACACTCTGTCCTTCCCATGGGCCATaGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGC +
Preference number: 1 (lower is better)
Translates to: PQAPRTHTLCPSHGP*LWERPTEGRGGSNC
Trigger: GCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCCCATGGGAAGGACAGAGTGTGTGTGTCCTTGGGGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR GCA 90 bp CAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCT +
Preference number: 1 (lower is better)
Translates to: QQVSEQCSRPPSARS*LVGGTWARAQRWSA
Trigger: AGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR CCA 90 bp CTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCGATCATG +
Preference number: 1 (lower is better)
Translates to: LPSGWHLGTSSAMER*CSVPVMSRITLSIM
Trigger: CATGATCGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR TCA 90 bp ACTGGGCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTaGGCCACAGGCTTGTCACAGACCACATACACACACACGCACACA +
Preference number: 1 (lower is better)
Translates to: TGQPLGQRTTPRTGR*ATGLSQTTYTHTHT
Trigger: TGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
3UTR GCA 90 bp CCTCGTGCTCAAAGAATCGGTCCTCCAGCGTCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGAGCAGCTTGTACTCCGGGTAGTAAT +
Preference number: 1 (lower is better)
Translates to: PRAQRIGPPASCLQG*YLHPRRAACTPGSN
Trigger: ATTACTACCCGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCGATTCTTTGAGCACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
3UTR GCA 90 bp CAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACATaGTTCTTAGATACATCAGCGGCTGTAACCACAGGGCTGAGGGGG +
Preference number: 1 (lower is better)
Translates to: QGSQVRELGRNMKVT*FLDTSAAVTTGLRG
Trigger: CCCCCTCAGCCCTGTGGTTACAGCCGCTGATGTATCTAAGAAGCATGTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR TCA 90 bp CGATACATTCAGCGATCCACACGATGTTGCGACACTCCTGCTCCTTaGGCTTCACGAAGGCATAGAAGACACCAAAGTGGAACTGGTTCA +
Preference number: 1 (lower is better)
Translates to: RYIQRSTRCCDTPAP*ASRRHRRHQSGTGS
Trigger: TGAACCAGTTCCACTTTGGTGTCTTCTATGCCTTCGTGAAGCTCAAGGAGCAGGAGTGTCGCAACATCGTGTGGATCGCTGAATGTATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
3UTR-3UTR CCA 90 bp GGGCCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCGGGGCCTCCTTGCTCTaGAGGGGGTCTTCGTCCATC +
Preference number: 2 (lower is better)
Translates to: GPWLWERPTEGRGGSNCPGASLL*RGSSSI
Trigger: GATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCC...GGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR-3UTR CCA 90 bp GGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTGGGGCCTCCTTGCTCTaGAGGGGGTCTTCGTCCATC +
Preference number: 2 (lower is better)
Translates to: GATHRRERRLKLPPGPRVGASLL*RGSSSI
Trigger: GATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCC...AACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR CAA 90 bp ATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: MFTASICSKLPSGWH*GTSSAMERWCSVPV
Trigger: CACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR-3UTR GCA 90 bp CCTGTTCATAGTCGTCAGCCCGAGCCAGCTGCGCCAGGCCCTCAGGGTAGAGCCCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 2 (lower is better)
Translates to: PVHSRQPEPAAPGPQGRAPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...GGCTCTACCCTGAGGGCCTGGCGCAGCTGGCTCGGGCTGACGACTATGAACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
3UTR-3UTR CCA 90 bp CAGGCCCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTGGCACGGTCCTCTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 2 (lower is better)
Translates to: QALRVEPPTVWKELGTVLSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...GAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
3UTR-3UTR TCA 90 bp CCAGGCCCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTGGCACGGTCCTAGCTCAGCAGGTGTCTaGGCAATGTTCACGGCCTCC +
Preference number: 2 (lower is better)
Translates to: PGPQGRAAHSVERAWHGPSSAGV*AMFTAS
Trigger: GGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCT...AGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
3UTR-3UTR GCA 90 bp AGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACTTGGCGATGGAGCGCTGGTaGAGCGTGCCTGTGATGAGC +
Preference number: 2 (lower is better)
Translates to: RMGHMASAVVPPSRVQNLAMERW*SVPVMS
Trigger: GCTCATCACAGGCACGCTGCACCAGCGCTCCATCGC...CAAGTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
3UTR-3UTR TCA 90 bp GCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCCACAAAGAGTGCAATTaGGAGCCTTGGGCCAGGACG +
Preference number: 2 (lower is better)
Translates to: AARTAYYTPDRQVSHRLVHKECN*EPWART
Trigger: CGTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTG...GACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000565835.5
3UTR-3UTR CCA 90 bp GCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 2 (lower is better)
Translates to: ARSCLVGGTWARAQRWSAAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...AGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
3UTR-3UTR TCA 90 bp AGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACTTGAGCTCAGCAGGTGTCTaGGCAATGTTCACGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RMGHMASAVVPPSRVQNLSSAGV*AMFTAS
Trigger: GGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCT...CAAGTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
3UTR-3UTR TCA 90 bp TGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGGTCTGTCACCAAAGATaGACTCAGGGTATGAGGGAG +
Preference number: 2 (lower is better)
Translates to: CLVGGTWARAQRWSAGAAVCHQR*TQGMRE
Trigger: CTCCCTCATACCCTGAGTTCATCTTTGGTGACAGAC...CGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564191.5
3UTR-3UTR GCA 90 bp GGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGTCAGTGCTCTGCAGATaGAGTTTCAAGTCTGACAGG +
Preference number: 2 (lower is better)
Translates to: GWHLGTSSAMERWCSVPVSVLCR*SFKSDR
Trigger: CCTGTCAGACTTGAAACTGCATCTGCAGAGCACTGA...CACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
3UTR-3UTR GCA 90 bp TCAAACTCCAGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 2 (lower is better)
Translates to: SNSRMGHMASAVVPPSRVPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...CACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCTGGAGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
3UTR-3UTR CCA 90 bp CACGTTCTTGACCTGTTCATAGTCGTCAGCCCGAGCCAGCTGCGCCAGGCCCTCGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 2 (lower is better)
Translates to: HVLDLFIVVSPSQLRQALAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...GAGGGCCTGGCGCAGCTGGCTCGGGCTGACGACTATGAACAGGTCAAGAACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
3UTR-3UTR CCA 90 bp GGCCCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTGGCACGGTCCTCTTGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 2 (lower is better)
Translates to: GPQGRAAHSVERAWHGPLAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...AAGAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
3UTR-3UTR CCA 90 bp CAGGCCCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTGGCACGGTCCTCGCGTGTCCACCAGAATaGCATTGTAGAGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: QALRVEPPTVWKELGTVLACPPE*HCRAQQ
Trigger: CTGCTGAGCTCTACAATGCCATTCTGGTGGACACGC...GAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
3UTR-3UTR CCA 90 bp ACATGCTTCTTAGATACATCAGCGGCTGTAACCACAGGGCTGAGGGGGCCTCCTGAGGGTCAGGAGAACTaGGCAGCCGCTAGGACAGCG +
Preference number: 2 (lower is better)
Translates to: TCFLDTSAAVTTGLRGPPEGQEN*AAARTA
Trigger: CGCTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTC...AGGAGGCCCCCTCAGCCCTGTGGTTACAGCCGCTGATGTATCTAAGAAGCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR-3UTR CCA 90 bp GATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACATTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 2 (lower is better)
Translates to: DGDDEGAAVCFKLQDGAHSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...ATGTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
3UTR-3UTR CCA 90 bp GCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTATCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 2 (lower is better)
Translates to: AQQVSEQCSRPPSARSCLSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...TAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR-3UTR CCA 90 bp CAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 2 (lower is better)
Translates to: QVSHRLVTDHIHTHAHTRLVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...GCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
3UTR-3UTR GCA 90 bp AGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACTTGGTAACTGTGTGGGGATaGAGTGAAGGCAGTAAGCCC +
Preference number: 2 (lower is better)
Translates to: RMGHMASAVVPPSRVQNLVTVWG*SEGSKP
Trigger: GGGCTTACTGCCTTCACTGCATCCCCACACAGTTAC...CAAGTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564191.5
3UTR-3UTR CCA 90 bp GAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 2 (lower is better)
Translates to: EQCSRPPSARSCLVGGTWAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
3UTR-3UTR CCA 90 bp GTAGAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 2 (lower is better)
Translates to: VELSRCLSNVHGLHLLEALVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...AGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR-3UTR CCA 90 bp GATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACATAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 2 (lower is better)
Translates to: DGDDEGAAVCFKLQDGAHKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...ATGTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
3UTR-3UTR CCA 90 bp GCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGTAACTGTAACTGTGTaGGGATGCAGTGAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: ARSCLVGGTWARAQRWSAVTVTV*GCSEGS
Trigger: ACTGCCTTCACTGCATCCCCACACAGTTACAGTTAC...AGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564191.5
3UTR-3UTR GCA 90 bp GCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGATTCCACAGTTAGGCTaGAGTAGCCACAACTATCCT +
Preference number: 2 (lower is better)
Translates to: ALGHELSDGALVQRACDEIPQLG*SSHNYP
Trigger: AGGATAGTTGTGGCTACTGCAGCCTAACTGTGGAAT...CTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564191.5
3UTR-3UTR CCA 90 bp GGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCGGATAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 2 (lower is better)
Translates to: GAELVEGLQVGLVEGVADKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...ATCCGCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
3UTR CAA 90 bp AAGAGCTTGGCACGGTCCTCTTTGGACAGCTCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGG +
Preference number: 2 (lower is better)
Translates to: KSLARSSLDSSVPKE*MVMMKARRSASNSR
Trigger: CCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAAGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
3UTR-3UTR CCA 90 bp AGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 2 (lower is better)
Translates to: RVLRMISMFISSRSCSEMSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...CATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCGCAACACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR-3UTR CCA 90 bp TCCTCTTTGGACAGCTCTGTGCCGAAAGAATTGATGGTGATGATGAAGGCGCGGAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 2 (lower is better)
Translates to: SSLDSSVPKELMVMMKARKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...CCGCGCCTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
3UTR CAA 90 bp TTGTTCAGCTTTACCTCGTGCTCAAAGAATCGGTCCTCCAGCGTCTaGTCTCCAGGGTTGCTACCTGCACCCTCGAAGAGCAGCTTGTAC +
Preference number: 2 (lower is better)
Translates to: LFSFTSCSKNRSSSV*SPGLLPAPSKSSLY
Trigger: GTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCGATTCTTTGAGCACGAGGTAAAGCTGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
3UTR-3UTR CCA 90 bp CTTGTCTCCAGGGTTGCTACCTGCACCCTCGAAGAGCAGCTTGTACTCCGGGTAGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 2 (lower is better)
Translates to: LVSRVATCTLEEQLVLRVEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...TACCCGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
3UTR-3UTR GCA 90 bp GGCATTGTAGAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCTCAGTGCTCTGCAGATaGAGTTTCAAGTCTGACAGG +
Preference number: 2 (lower is better)
Translates to: GIVELSRCLSNVHGLHLLSVLCR*SFKSDR
Trigger: CCTGTCAGACTTGAAACTGCATCTGCAGAGCACTGA...GAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTCTACAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
3UTR-3UTR GCA 90 bp CTTGTACTCCGGGTAGTAATCGGCCACGTTCTTGACCTGTTCATAGTCGTCAGCATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: LVLRVVIGHVLDLFIVVSISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...GCTGACGACTATGAACAGGTCAAGAACGTGGCCGATTACTACCCGGAGTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
3UTR-3UTR TCA 90 bp GTCCTCTTTGGACAGCTCTGTGCCGAAAGAATTGATGGTGATGATGAAGGCGCGGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: VLFGQLCAERIDGDDEGAVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...CGCGCCTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
3UTR-3UTR TCA 90 bp TTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACATGCTTCTTAGATACCACAAAGAGTGCAATTaGGAGCCTTGGGCCAGGACG +
Preference number: 2 (lower is better)
Translates to: FSGQGVREEHESDMLLRYHKECN*EPWART
Trigger: CGTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTG...GTATCTAAGAAGCATGTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290949.8
3UTR-3UTR CCA 90 bp ATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCTGGAAAGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 2 (lower is better)
Translates to: MISMFISSRSCSEMQSWKEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...TTTCCAGGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
3UTR GCA 72 bp TCAGCGGCTGTAACCACAGGGCTGAGGGGGCCTCCTTaGTCTGGAGGGGGTCTTCGTCCATCCTTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: SAAVTTGLRGPP*SGGGLRPSLVG
Trigger: CCCCACCAAGGATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCCCTCAGCCCTGTGGTTACAGCCGCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR CCA 72 bp CCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCG +
Preference number: 3 (lower is better)
Translates to: PPSARSCLVGGT*ARAQRWSAGAA
Trigger: CGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR GCA 72 bp TGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTaGCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTT +
Preference number: 3 (lower is better)
Translates to: WERPTEGRGGSN*PQAPGFSGQGV
Trigger: AACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR CCA 72 bp GGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTG +
Preference number: 3 (lower is better)
Translates to: GWHLGTSSAMER*CSVPVMSRITL
Trigger: CAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR CCA 72 bp TTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGG +
Preference number: 3 (lower is better)
Translates to: FTASICSKLPSG*HLGTSSAMERW
Trigger: CCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR GCA 72 bp TGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTaGAGCGTGCCTGTGATGAGCAGGATCACGTTGTCG +
Preference number: 3 (lower is better)
Translates to: WHLGTSSAMERW*SVPVMSRITLS
Trigger: CGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR-3UTR CAA 90 bp CCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGACCACCATCTTCTCCTaGAGCCGGTCATCGATGACT +
Preference number: 3 (lower is better)
Translates to: PSGWHLGTSSAMERWCSVTTIFS*SRSSMT
Trigger: AGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGT...CACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
3UTR-3UTR CAA 90 bp GCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACACACACGCACACACACTaGAGAGCCTTGGGCCAGGAC +
Preference number: 3 (lower is better)
Translates to: ARTAYYTPDRQVSHRLVTHTHTH*RALGQD
Trigger: GTCCTGGCCCAAGGCTCTCAAGTGTGTGTGCGTGTG...TGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602876.5
3UTR GCA 72 bp TCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGA +
Preference number: 3 (lower is better)
Translates to: SEQCSRPPSARS*LVGGTWARAQR
Trigger: TCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
3UTR CCA 72 bp CCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACAGCTCTGTGCCGAAAG +
Preference number: 3 (lower is better)
Translates to: PQGRAAHSVERA*HGPLWTALCRK
Trigger: CTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
3UTR TCA 72 bp GCAGCTTGTACTCCGGGTAGTAATCGGCCACGTTCTTaGCCTGTTCATAGTCGTCAGCCCGAGCCAGCTGCG +
Preference number: 3 (lower is better)
Translates to: AACTPGSNRPRS*PVHSRQPEPAA
Trigger: CGCAGCTGGCTCGGGCTGACGACTATGAACAGGTCAAGAACGTGGCCGATTACTACCCGGAGTACAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
3UTR-3UTR CAA 90 bp TCCTCTTTGGACAGCTCTGTGCCGAAAGAATTGATGGTGATGATGAAGGCGCGGCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATG +
Preference number: 3 (lower is better)
Translates to: SSLDSSVPKELMVMMKARPSGWH*GTSSAM
Trigger: CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG...CCGCGCCTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
3UTR GCA 72 bp CAAAGAATCGGTCCTCCAGCGTCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGAGCAGCTTGTACTCCG +
Preference number: 3 (lower is better)
Translates to: QRIGPPASCLQG*YLHPRRAACTP
Trigger: CGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCGATTCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
3UTR TCA 72 bp CAGCGATCCACACGATGTTGCGACACTCCTGCTCCTTaGGCTTCACGAAGGCATAGAAGACACCAAAGTGGA +
Preference number: 3 (lower is better)
Translates to: QRSTRCCDTPAP*ASRRHRRHQSG
Trigger: TCCACTTTGGTGTCTTCTATGCCTTCGTGAAGCTCAAGGAGCAGGAGTGTCGCAACATCGTGTGGATCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
3UTR-3UTR CAA 90 bp CTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCGATCATGTAACTGTAACCACCATCTTCTCCTaGAGCCGGTCATCGATGACT +
Preference number: 3 (lower is better)
Translates to: LVQRACDEQDHVVDHVTVTTIFS*SRSSMT
Trigger: AGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGT...TACAGTTACATGATCGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
3UTR-3UTR CAA 90 bp AAGTGGAACTGGTTCAGGAAGGCCAACTTGTTCAGCTTTACCTCGTGCTCAAAGTTGGCACGGTCCTCTTaGGACAGCTCTGTGCCGAAA +
Preference number: 3 (lower is better)
Translates to: KWNWFRKANLFSFTSCSKLARSS*DSSVPK
Trigger: TTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAA...CTTTGAGCACGAGGTAAAGCTGAACAAGTTGGCCTTCCTGAACCAGTTCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR TCA 90 bp CTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTCCCCCACAGCCTGTaGGGCCCCGTGCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LVGGTWARAQRWSAGAACLPHSL*GPVPSA
Trigger: GGCTGAGGGCACGGGGCCTCACAGGCTGTGGGGGAG...GCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566322.6
CDS-3UTR CCA 90 bp GGCCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCCCGGGAAGAACGACATaGCTGCTGCGGGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GHGSGSDPQKGEEAQTAPPGRTT*LLRERR
Trigger: CCGCCGCTCCCGCAGCAGCCATGTCGTTCTTCCCGG...GGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp AACTCCAGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGGGTAGTCGGCCTGGCTaGGCACCCCGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: NSRMGHMASAVVPPSRVQGSRPG*APRPSG
Trigger: GCCTGAAGGCCGGGGTGCTCAGCCAGGCCGACTACC...CTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCTGGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
CDS-3UTR GCA 90 bp GGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGGCGATGGAGCGCTGGTaGAGCGTGCCTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: GWHLGTSSAMERWCSVPVAMERW*SVPVMS
Trigger: GCTCATCACAGGCACGCTGCACCAGCGCTCCATCGC...CACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp GGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: GWHLGTSSAMERWCSVPVLVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...CACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp TGGGCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGGGGGCCTCCTTGCTCTaGAGGGGGTCTTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: WAAARTAYYTPDRQVSHRGASLL*RGSSSI
Trigger: GATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCC...CCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGCCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR CAA 72 bp GCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASICSKLPSGWH*GTSSAMERWCS
Trigger: GCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp GCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGCGATGGAGCGCTGGTaGAGCGTGCCTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: ARSCLVGGTWARAQRWSAAMERW*SVPVMS
Trigger: GCTCATCACAGGCACGCTGCACCAGCGCTCCATCGC...AGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp GGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTGAAGGCGCGGCGGTCTaGTTCAAACTCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GATHRRERRLKLPPGPRVEGAAV*FKLQDG
Trigger: CCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTC...AACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp CCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGGAAGGCGCGGCGGTCTaGTTCAAACTCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PSGWHLGTSSAMERWCSVEGAAV*FKLQDG
Trigger: CCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTC...CACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CCA 90 bp AGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACTTGCCGGGAAGAACGACATaGCTGCTGCGGGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: RMGHMASAVVPPSRVQNLPGRTT*LLRERR
Trigger: CCGCCGCTCCCGCAGCAGCCATGTCGTTCTTCCCGG...CAAGTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561852.5
ENST00000563064.5
ENST00000564788.1
CDS-3UTR CCA 90 bp AGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SGWHLGTSSAMERWCSVPSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...AGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp GGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: GATHRRERRLKLPPGPRVLVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...AACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp TGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCAGGCCAGCTCAGCAGGTGTCTaGGCAATGTTCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WLWERPTEGRGGSNCPQASSAGV*AMFTAS
Trigger: GGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCT...GGCCTGGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp CCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACGAACGACATGGCTGCTaGGGGAGCGGCGGGACCGGA +
Preference number: 4 (lower is better)
Translates to: PQAPGFSGQGVREEHESDERHGC*GSGGTG
Trigger: TCCGGTCCCGCCGCTCCCGCAGCAGCCATGTCGTTC...GTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290949.8
CDS-3UTR GCA 90 bp GGGCCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GPWLWERPTEGRGGSNCPPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...GGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp TGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCGAAGGCGCGGCGGTCTaGTTCAAACTCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: CSKLPSGWHLGTSSAMEREGAAV*FKLQDG
Trigger: CCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTC...GCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR GCA 90 bp GGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAAGAGGAGGCTCAAACTaGCCCCAGGCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GEEAQTAPRPQGSQVRELRGGSN*PQAPGF
Trigger: GAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCT...TAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp GTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VALGHELSDGALVQRACDSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...ATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CCAGGCCCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTGGCACGGTCCTCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: PGPQGRAAHSVERAWHGPLVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...AGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR CCA 90 bp GCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: ASICSKLPSGWHLGTSSALVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...CGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CACAGGGCTGAGGGGGCCTCCTTGCTCTGGAGGGGGTCTTCGTCCATCCTTGGTTTGGCGCGGTGGCGCTaGGCGATACATTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: HRAEGASLLWRGSSSILGLARWR*AIHSAI
Trigger: GATCGCTGAATGTATCGCCCAGCGCCACCGCGCCAA...ACCAAGGATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCCCTCAGCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp GGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGAGGGTCAGGAGAACTaGGCAGCCGCTAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: GEEAQTAPRPQGSQVRELEGQEN*AAARTA
Trigger: CGCTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTC...TAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp AGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGGTCAGGAGAACTaGGCAGCCGCTAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: RGGSNCPQAPGFSGQGVREGQEN*AAARTA
Trigger: CGCTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTC...CCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp ATAGGCATGGTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGGGTAGTCGGCCTGGCTaGGCACCCCGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: IGMVPHVAELHHHLLLEPGSRPG*APRPSG
Trigger: GCCTGAAGGCCGGGGTGCTCAGCCAGGCCGACTACC...CGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAACCATGCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563064.5
CDS-3UTR TCA 90 bp GGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCGGAGGTAGTCGGCCTGGCTaGGCACCCCGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GCRTCRRTPGRPCRGCCGGSRPG*APRPSG
Trigger: GCCTGAAGGCCGGGGTGCTCAGCCAGGCCGACTACC...TCCGCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
CDS-3UTR GCA 90 bp CCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGTCCAGGGTTGCTACCTaGACCCTCGAAGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PSGWHLGTSSAMERWCSVSRVAT*TLEEQL
Trigger: AAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGA...CACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR GCA 90 bp CCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTTCCTGTGATCTCTaGTCCAGCAAGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSGWHLGTSSAMERWCSVPSCDL*SSKCSR
Trigger: CCTGGAGCACTTGCTGGAGCAGAGATCACAGGAAGG...CACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp AAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: KLPSGWHLGTSSAMERWCKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...GCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp CTCCAGGGTTGCTACCTGCACCCTCGAAGAGCAGCTTGTACTCCGGGTAGTAATGAACGACATGGCTGCTaGGGGAGCGGCGGGACCGGA +
Preference number: 4 (lower is better)
Translates to: LQGCYLHPRRAACTPGSNERHGC*GSGGTG
Trigger: TCCGGTCCCGCCGCTCCCGCAGCAGCCATGTCGTTC...ATTACTACCCGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561852.5
ENST00000563064.5
CDS-3UTR GCA 90 bp TCCCGCCCAGTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGAACGACATGGCTGCTaGGGGAGCGGCGGGACCGGA +
Preference number: 4 (lower is better)
Translates to: SRPVGCRTCRRTPGRPCRERHGC*GSGGTG
Trigger: TCCGGTCCCGCCGCTCCCGCAGCAGCCATGTCGTTC...TCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561852.5
ENST00000563064.5
ENST00000564788.1
CDS-3UTR GCA 90 bp GTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCAGAAGAACGACATGGCTaGTGCGGGAGCGGCGGGACC +
Preference number: 4 (lower is better)
Translates to: VSHRLVTDHIHTHAHTRAEERHG*CGSGGT
Trigger: GGTCCCGCCGCTCCCGCAGCAGCCATGTCGTTCTTC...TGCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290949.8
CDS-3UTR GCA 90 bp CCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGACCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: PPSARSCLVGGTWARAQRPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...TCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp TCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SARSCLVGGTWARAQRWSPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...GCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp TTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCCTCTGCTCCAGCAAGTaGTCCAGGGAAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: FTASICSKLPSGWHLGTSLCSSK*SREVHR
Trigger: CCTGTGGACTTCCCTGGAGCACTTGCTGGAGCAGAG...GCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000568101.5
CDS-3UTR CCA 90 bp GCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACTTGAGAGCCCCGGGAAGAACGACATaGCTGCTGCGGGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: ATGLSQTTYTHTHTHLRAPGRTT*LLRERR
Trigger: CCGCCGCTCCCGCAGCAGCCATGTCGTTCTTCCCGG...GGCTCTCAAGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS-3UTR CCA 90 bp GTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 4 (lower is better)
Translates to: VALGHELSDGALVQRACDAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...ATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CGGTGGCGCTGGGCGATACATTCAGCGATCCACACGATGTTGCGACACTCCTGCCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: RWRWAIHSAIHTMLRHSCLVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...GCAGGAGTGTCGCAACATCGTGTGGATCGCTGAATGTATCGCCCAGCGCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR CCA 90 bp GTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATCTTCAAACTCCAGGATaGGGCACATGGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: VALGHELSDGALVQRACDLQTPG*GTWHQP
Trigger: CGGCTGATGCCATGTGCCCCATCCTGGAGTTTGAAG...ATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CCA 90 bp GCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTCTTCAAACTCCAGGATaGGGCACATGGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: AAARTAYYTPDRQVSHRLLQTPG*GTWHQP
Trigger: CGGCTGATGCCATGTGCCCCATCCTGGAGTTTGAAG...AAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp GCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTTGGCACGGTCCTCTTTaGACAGCTCTGTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: AAARTAYYTPDRQVSHRLWHGPL*TALCRK
Trigger: CTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCA...AAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp GTCAGGAGAACTGGGCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGGCACGGTCCTCTTTaGACAGCTCTGTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: VRRTGQPLGQRTTPRTGRWHGPL*TALCRK
Trigger: CTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCA...CCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGCCCAGTTCTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp GCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCTGGCACGGTCCTCTTTaGACAGCTCTGTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: AARTAYYTPDRQVSHRLVWHGPL*TALCRK
Trigger: CTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCA...GACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp CACAGGGCTGAGGGGGCCTCCTTGCTCTGGAGGGGGTCTTCGTCCATCCTTGGTTCGATTTTGGCGCGGTaGCGCTGGGCGATACATTCA +
Preference number: 4 (lower is better)
Translates to: HRAEGASLLWRGSSSILGSILAR*RWAIHS
Trigger: TGAATGTATCGCCCAGCGCCACCGCGCCAAAATCGA...ACCAAGGATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCCCTCAGCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp CAGGTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGGTAGTCGGCCTGGCTaGGCACCCCGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QVGLVEGVADDLDVHLVKGSRPG*APRPSG
Trigger: GCCTGAAGGCCGGGGTGCTCAGCCAGGCCGACTACC...CTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
CDS-3UTR TCA 90 bp AGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGAGCTCAGCAGGTGTCTaGGCAATGTTCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSAMERWCSVPVMSRITLSSAGV*AMFTAS
Trigger: GGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCT...CAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR TCA 90 bp AGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGCACAAAGAGTGCAATTaGGAGCCTTGGGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: RGGSNCPQAPGFSGQGVRHKECN*EPWART
Trigger: CGTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTG...CCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290949.8
CDS-3UTR TCA 90 bp GTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCACTCCCCAGGTCAGCTaGCGCTGCGTCCTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: VGCRTCRRTPGRPCRGCCTPQVS*RCVLSG
Trigger: CCCGCTGAGGACGCAGCGTCAGCTGACCTGGGGAGT...GCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563064.5
CDS-3UTR GCA 90 bp CTTCTTAGATACATCAGCGGCTGTAACCACAGGGCTGAGGGGGCCTCCTTGCTCGCGATGGAGCGCTGGTaGAGCGTGCCTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: LLRYISGCNHRAEGASLLAMERW*SVPVMS
Trigger: GCTCATCACAGGCACGCTGCACCAGCGCTCCATCGC...GAGCAAGGAGGCCCCCTCAGCCCTGTGGTTACAGCCGCTGATGTATCTAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp CAGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACGCGATGGAGCGCTGGTaGAGCGTGCCTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: QAGEPQACHRPHTHTRTHAMERW*SVPVMS
Trigger: GCTCATCACAGGCACGCTGCACCAGCGCTCCATCGC...GTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000602876.5
CDS-3UTR GCA 90 bp GGCGAGTGGCTCATAGGCATGGTTCCTCATGTGGCGGAACTCCACCACCATCTTGCGATGGAGCGCTGGTaGAGCGTGCCTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: GEWLIGMVPHVAELHHHLAMERW*SVPVMS
Trigger: GCTCATCACAGGCACGCTGCACCAGCGCTCCATCGC...AAGATGGTGGTGGAGTTCCGCCACATGAGGAACCATGCCTATGAGCCACTCGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp ATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: MFTASICSKLPSGWHLGTPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...CGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp TGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CLVGGTWARAQRWSAGAAISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...CGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp GCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTTCCCGCCCAGTAGGGTaGAGAACTTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: AAARTAYYTPDRQVSHRLSRPVG*RTCRRT
Trigger: AGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA...AAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp GCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTTCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: AAARTAYYTPDRQVSHRLSCLQG*YLHPRR
Trigger: TCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGA...AAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp AGGGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: RERRLKLPPGPRVLRSGSSCLQG*YLHPRR
Trigger: TCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGA...ACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp GGCCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCATGTTGCGACACTCCTaGTCCTTGAGCTTCACGAAG +
Preference number: 4 (lower is better)
Translates to: GHGSGSDPQKGEEAQTAPMLRHS*SLSFTK
Trigger: CTTCGTGAAGCTCAAGGAGCAGGAGTGTCGCAACAT...GGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACAAGAGGAGGCTCAAACTaGCCCCAGGCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PRPQGSQVRELGRNMKVTRGGSN*PQAPGF
Trigger: GAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCT...TGTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp CACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACCCTTCCTGTGATCTCTaGTCCAGCAAGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HELSDGALVQRACDEQDHPSCDL*SSKCSR
Trigger: CCTGGAGCACTTGCTGGAGCAGAGATCACAGGAAGG...GTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp CTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCCTGAAGCTGGAGTTCTaGCTCTCCCCCACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSDGALVQRACDEQDHVVLKLEF*LSPTAC
Trigger: ACAGGCTGTGGGGGAGAGGCAGAACTCCAGCTTCAG...GACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566322.6
CDS-3UTR CCA 90 bp AACTCCAGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 4 (lower is better)
Translates to: NSRMGHMASAVVPPSRVQAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...CTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCTGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR CCA 90 bp TCCAGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 4 (lower is better)
Translates to: SRMGHMASAVVPPSRVQNAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...GTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR CCA 90 bp GGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 4 (lower is better)
Translates to: GEEAQTAPRPQGSQVRELAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...TAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp GTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VSEQCSRPPSARSCLVGGSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...GCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp ATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: MFTASICSKLPSGWHLGTKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...CGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CAGGAGAACTGGGCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGGCGTGTCCACCAGAATaGCATTGTAGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QENWAAARTAYYTPDRQVACPPE*HCRAQQ
Trigger: CTGCTGAGCTCTACAATGCCATTCTGGTGGACACGC...CACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGCCCAGTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp TTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGGCGTGTCCACCAGAATaGCATTGTAGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LGTSSAMERWCSVPVMSRACPPE*HCRAQQ
Trigger: CTGCTGAGCTCTACAATGCCATTCTGGTGGACACGC...CCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CACACTCTGTCCTTCCCATGGGCCATGGCTCTGGGAGCGACCCACAGAAGGGAGCTTCAAACTCCAGGATaGGGCACATGGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: HTLSFPWAMALGATHRRELQTPG*GTWHQP
Trigger: CGGCTGATGCCATGTGCCCCATCCTGGAGTTTGAAG...CTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCCCATGGGAAGGACAGAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp GGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCGAGCCGCCCACAGTGTaGAAAGAGCTTGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: GEPQACHRPHTHTRTHTREPPTV*KELGTV
Trigger: GACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTC...GCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CCA 90 bp CTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACGAGCCGCCCACAGTGTaGAAAGAGCTTGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: LHPGQAGEPQACHRPHTHEPPTV*KELGTV
Trigger: GACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTC...GTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp GGGCTGAGGGGGCCTCCTTGCTCTGGAGGGGGTCTTCGTCCATCCTTGGTGGGGACACCAAAGTGGAACTaGTTCAGGAAGGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: GLRGPPCSGGGLRPSLVGTPKWN*FRKANL
Trigger: CAAGTTGGCCTTCCTGAACCAGTTCCACTTTGGTGT...CCCCACCAAGGATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCCCTCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp GCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACATGTAGTTGTCGATTTTaGCGCGGTGGCGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: ARTAYYTPDRQVSHRLVTCSCRF*RGGAGR
Trigger: TCGCCCAGCGCCACCGCGCCAAAATCGACAACTACA...TGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp GGCCTAAGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGCCGCTAGGACAGGAGGGTCAGGAGAACTaGGCAGCCGCTAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: GLRTVSKRVRRTGQPLGQEGQEN*AAARTA
Trigger: CGCTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTC...CTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCTTAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp CCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCATCAGCACTGTCACTaGACTGTCATCACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PSGWHLGTSSAMERWCSVHQHCH*TVITQG
Trigger: TCCCTGAGTGATGACAGTCCAGTGACAGTGCTGATG...CACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR TCA 90 bp CAGGCCCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTGGCACGGTCCTCAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: QALRVEPPTVWKELGTVLRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...GAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR TCA 90 bp CAGGCCCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTGGCACGGTCCTCAATCGGCCACGTTCTTaGCCTGTTCATAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: QALRVEPPTVWKELGTVLNRPRS*PVHSRQ
Trigger: CTGACGACTATGAACAGGTCAAGAACGTGGCCGATT...GAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR TCA 90 bp TGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTATGAGGGAGCTAAATaGGGCCTAGGGGAAATTCCT +
Preference number: 4 (lower is better)
Translates to: CLVGGTWARAQRWSAGAAYEGAK*GLGEIP
Trigger: AGGAATTTCCCCTAGGCCTCATTTAGCTCCCTCATA...CGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564191.5
CDS-3UTR GCA 90 bp CAGGTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGAACGACATGGCTGCTaGGGGAGCGGCGGGACCGGA +
Preference number: 4 (lower is better)
Translates to: QVGLVEGVADDLDVHLVKERHGC*GSGGTG
Trigger: TCCGGTCCCGCCGCTCCCGCAGCAGCCATGTCGTTC...CTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561852.5
ENST00000563064.5
CDS-3UTR GCA 90 bp TGGGCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGTCAGTGCTCTGCAGATaGAGTTTCAAGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: WAAARTAYYTPDRQVSHRSVLCR*SFKSSS
Trigger: GCTAGAGGACTTGAAACTGCATCTGCAGAGCACTGA...CCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp GCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACTTGAGAGCCGCGATGGAGCGCTGGTaGAGCGTGCCTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: ATGLSQTTYTHTHTHLRAAMERW*SVPVMS
Trigger: GCTCATCACAGGCACGCTGCACCAGCGCTCCATCGC...GGCTCTCAAGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS-3UTR GCA 90 bp AGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCGATCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SDGALVQRACDEQDHVVDPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...ATCGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp GAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: ELSRCLSNVHGLHLLEAAPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...GGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp CAGGAGAACTGGGCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QENWAAARTAYYTPDRQVISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...CACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGCCCAGTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp AGAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCGAAGGCGCGGCGGTCTaGTTCAAACTCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: RAQQVSEQCSRPPSARSCEGAAV*FKLQDG
Trigger: CCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTC...GCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR GCA 90 bp TTGATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACGAAGGCGCGGCGGTCTaGTTCAAACTCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LMVMMKARRSASNSRMGHEGAAV*FKLQDG
Trigger: CCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTC...GTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR GCA 90 bp GGCCTAAGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGCCGCTAGGACAGGAAGGCGCGGCGGTCTaGTTCAAACTCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GLRTVSKRVRRTGQPLGQEGAAV*FKLQDG
Trigger: CCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTC...CTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCTTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp ATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGTCCAGGGTTGCTACCTaGACCCTCGAAGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: ICSKLPSGWHLGTSSAMESRVAT*TLEEQL
Trigger: AAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGA...CTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR GCA 90 bp TGGGCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGTTCAGCTTTACCTCGTaGTCAAAGAATCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WAAARTAYYTPDRQVSHRFSFTS*SKNRSS
Trigger: GGAGGACCGATTCTTTGAGCACGAGGTAAAGCTGAA...CCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp GCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGTTGCGACACTCCTaGTCCTTGAGCTTCACGAAG +
Preference number: 4 (lower is better)
Translates to: ASICSKLPSGWHLGTSSAMLRHS*SLSFTK
Trigger: CTTCGTGAAGCTCAAGGAGCAGGAGTGTCGCAACAT...CGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR GCA 90 bp AGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGCCGCTAGGACAGCGTACTCTGAGGGGGCCTCCTTaGTCTGGAGGGGGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: RTVSKRVRRTGQPLGQRTLRGPP*SGGGLR
Trigger: ACGAAGACCCCCTCCAGAGCAAGGAGGCCCCCTCAG...AGTACGCTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp AGAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCGGGAAGTCCACAGGCTaGCGGAGAGAGAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RAQQVSEQCSRPPSARSCGKSTG*RREKPL
Trigger: CAAGGGCTTCTCTCTCCGGCAGCCTGTGGACTTCCC...GCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000568101.5
CDS-3UTR GCA 90 bp TCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGCCTTCCTGTGATCTCTaGTCCAGCAAGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SICSKLPSGWHLGTSSAMPSCDL*SSKCSR
Trigger: CCTGGAGCACTTGCTGGAGCAGAGATCACAGGAAGG...CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp GTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCCGGGAAGAACGACATaGCTGCTGCGGGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VGLVEGVADDLDVHLVKVPGRTT*LLRERR
Trigger: CCGCCGCTCCCGCAGCAGCCATGTCGTTCTTCCCGG...GACCTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561852.5
ENST00000563064.5
CDS-3UTR CCA 90 bp CAGGTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGCCGGGAAGAACGACATaGCTGCTGCGGGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QVGLVEGVADDLDVHLVKPGRTT*LLRERR
Trigger: CCGCCGCTCCCGCAGCAGCCATGTCGTTCTTCCCGG...CTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561852.5
ENST00000563064.5
CDS-3UTR CCA 90 bp AGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACTTGGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 4 (lower is better)
Translates to: RMGHMASAVVPPSRVQNLAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...CAAGTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR CCA 90 bp CAGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: QAGEPQACHRPHTHTRTHSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...GTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000602876.5
CDS-3UTR CCA 90 bp CCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PQAPGFSGQGVREEHESDKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...GTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp TCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTGCGTGTCCACCAGAATaGCATTGTAGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SRPPSARSCLVGGTWARAACPPE*HCRAQQ
Trigger: CTGCTGAGCTCTACAATGCCATTCTGGTGGACACGC...AGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp TCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGCTTCAAACTCCAGGATaGGGCACATGGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SICSKLPSGWHLGTSSAMLQTPG*GTWHQP
Trigger: CGGCTGATGCCATGTGCCCCATCCTGGAGTTTGAAG...CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CCA 90 bp GCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACACTTCAAACTCCAGGATaGGGCACATGGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: ARTAYYTPDRQVSHRLVTLQTPG*GTWHQP
Trigger: CGGCTGATGCCATGTGCCCCATCCTGGAGTTTGAAG...TGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp GCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: AAARTAYYTPDRQVSHRLSVERA*HGPLWT
Trigger: TGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACT...AAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp CACAGGGCTGAGGGGGCCTCCTTGCTCTGGAGGGGGTCTTCGTCCATCCTTGGTAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: HRAEGASLLWRGSSSILGSVERA*HGPLWT
Trigger: TGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACT...ACCAAGGATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCCCTCAGCCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp GAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCACATTGGCGCGGTGGCGCTaGGCGATACATTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: EPQACHRPHTHTRTHTRTLARWR*AIHSAI
Trigger: GATCGCTGAATGTATCGCCCAGCGCCACCGCGCCAA...TGTGCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CCA 90 bp GCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACATCGATTTTGGCGCGGTaGCGCTGGGCGATACATTCA +
Preference number: 4 (lower is better)
Translates to: ARTAYYTPDRQVSHRLVTSILAR*RWAIHS
Trigger: TGAATGTATCGCCCAGCGCCACCGCGCCAAAATCGA...TGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp GGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCTGTAGTTGTCGATTTTaGCGCGGTGGCGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GEPQACHRPHTHTRTHTRCSCRF*RGGAGR
Trigger: TCGCCCAGCGCCACCGCGCCAAAATCGACAACTACA...GCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CCA 90 bp CTAAGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGCCGCTAGGACAGCGTGGGGCCTCCTTGCTCTaGAGGGGGTCTTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: LRTVSKRVRRTGQPLGQRGASLL*RGSSSI
Trigger: GATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCC...ACGCTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp GCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACTCCTTCCCATGGGCCATaGCTCTGGGAGCGACCCACA +
Preference number: 4 (lower is better)
Translates to: AGEPQACHRPHTHTRTHTPSHGP*LWERPT
Trigger: TGTGGGTCGCTCCCAGAGCCATGGCCCATGGGAAGG...AGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS-3UTR TCA 90 bp CAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTAGCTCAGCAGGTGTCTaGGCAATGTTCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVSEQCSRPPSARSCLVGSSAGV*AMFTAS
Trigger: GGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCT...ACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR TCA 90 bp TTGATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACAGCTCAGCAGGTGTCTaGGCAATGTTCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LMVMMKARRSASNSRMGHSSAGV*AMFTAS
Trigger: GGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCT...GTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR TCA 90 bp CCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCAGGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: PWLWERPTEGRGGSNCPQVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...CTGGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp CACACTCTGTCCTTCCCATGGGCCATGGCTCTGGGAGCGACCCACAGAAGGGAGAATCGGCCACGTTCTTaGCCTGTTCATAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: HTLSFPWAMALGATHRRENRPRS*PVHSRQ
Trigger: CTGACGACTATGAACAGGTCAAGAACGTGGCCGATT...CTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCCCATGGGAAGGACAGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp GAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGCACAAAGAGTGCAATTaGGAGCCTTGGGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: EQCSRPPSARSCLVGGTWHKECN*EPWART
Trigger: CGTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTG...CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR GCA 90 bp GCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGTCAGTGCTCTGCAGATaGAGTTTCAAGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: ASICSKLPSGWHLGTSSASVLCR*SFKSSS
Trigger: GCTAGAGGACTTGAAACTGCATCTGCAGAGCACTGA...CGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564191.5
CDS-3UTR GCA 90 bp CACGTTCTTGACCTGTTCATAGTCGTCAGCCCGAGCCAGCTGCGCCAGGCCCTCATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HVLDLFIVVSPSQLRQALISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...GAGGGCCTGGCGCAGCTGGCTCGGGCTGACGACTATGAACAGGTCAAGAACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR GCA 90 bp TCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGTCCCGCCCAGTAGGGTaGAGAACTTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: SICSKLPSGWHLGTSSAMSRPVG*RTCRRT
Trigger: AGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA...CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR GCA 90 bp GCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACATCCCGCCCAGTAGGGTaGAGAACTTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: ARTAYYTPDRQVSHRLVTSRPVG*RTCRRT
Trigger: AGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA...TGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp GCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACTTGAGAGCCGAAGGCGCGGCGGTCTaGTTCAAACTCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ATGLSQTTYTHTHTHLRAEGAAV*FKLQDG
Trigger: CCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTC...GGCTCTCAAGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS-3UTR GCA 90 bp AGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACTTGTCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: RMGHMASAVVPPSRVQNLSCLQG*YLHPRR
Trigger: TCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGA...CAAGTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR GCA 90 bp GCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCCAGGACCTGAGGGGGCCTCCTTaGTCTGGAGGGGGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTQRVQLRALGQDLRGPP*SGGGLR
Trigger: ACGAAGACCCCCTCCAGAGCAAGGAGGCCCCCTCAG...GTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290949.8
CDS-3UTR GCA 90 bp ATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACATGCTCTGCTCCAGCAAGTaGTCCAGGGAAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: MVMMKARRSASNSRMGHMLCSSK*SREVHR
Trigger: CCTGTGGACTTCCCTGGAGCACTTGCTGGAGCAGAG...CATGTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR GCA 90 bp AGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGGTAACTGTGTGGGGATaGAGTGAAGGCAGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: SSAMERWCSVPVMSRITLVTVWG*SEGSKP
Trigger: GGGCTTACTGCCTTCACTGCATCCCCACACAGTTAC...CAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564191.5
CDS-3UTR CCA 90 bp GGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 4 (lower is better)
Translates to: GHELSDGALVQRACDEQDEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...ATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp GGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 4 (lower is better)
Translates to: GGSNCPQAPGFSGQGVREEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...CTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp ATCTTCTCCTTGAGCCGGTCATCGATGACTGACACCGTCAGAGGTGATGCCTCGTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: IFSLSRSSMTDTVRGDASSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...CGAGGCATCACCTCTGACGGTGTCAGTCATCGATGACCGGCTCAAGGAGAAGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp ATAGGCATGGTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGGAGCCGCCCACAGTGTaGAAAGAGCTTGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: IGMVPHVAELHHHLLLEPEPPTV*KELGTV
Trigger: GACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTC...CGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAACCATGCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR CCA 90 bp GCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCGATCATGTAACTGAGCCGCCCACAGTGTaGAAAGAGCTTGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: ALVQRACDEQDHVVDHVTEPPTV*KELGTV
Trigger: GACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTC...AGTTACATGATCGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR CCA 90 bp GGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCGGATTGGCGCGGTGGCGCTaGGCGATACATTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: GCRTCRRTPGRPCRGCCGLARWR*AIHSAI
Trigger: GATCGCTGAATGTATCGCCCAGCGCCACCGCGCCAA...TCCGCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR CCA 90 bp GCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTATGTAGTTGTCGATTTTaGCGCGGTGGCGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: AQQVSEQCSRPPSARSCLCSCRF*RGGAGR
Trigger: TCGCCCAGCGCCACCGCGCCAAAATCGACAACTACA...TAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR CCA 90 bp CCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACATGTAGTTGTCGATTTTaGCGCGGTGGCGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: PRPQGSQVRELGRNMKVTCSCRF*RGGAGR
Trigger: TCGCCCAGCGCCACCGCGCCAAAATCGACAACTACA...TGTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp ACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCCCTTCCCATGGGCCATaGCTCTGGGAGCGACCCACA +
Preference number: 4 (lower is better)
Translates to: TRAHTHTHTQRVQLRALGPSHGP*LWERPT
Trigger: TGTGGGTCGCTCCCAGAGCCATGGCCCATGGGAAGG...GCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290949.8
CDS-3UTR TCA 90 bp GAGGAACATGAAAGTGACATGCTTCTTAGATACATCAGCGGCTGTAACCACAGGGGTAGTCGGCCTGGCTaGGCACCCCGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: EEHESDMLLRYISGCNHRGSRPG*APRPSG
Trigger: GCCTGAAGGCCGGGGTGCTCAGCCAGGCCGACTACC...CCTGTGGTTACAGCCGCTGATGTATCTAAGAAGCATGTCACTTTCATGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp TCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SARSCLVGGTWARAQRWSVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...GCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR TCA 90 bp AGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: SSAMERWCSVPVMSRITLRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...CAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR TCA 90 bp AGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACTTGAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: RMGHMASAVVPPSRVQNLRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...CAAGTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR TCA 90 bp AGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCACACCACAAAGAGTGCAATTaGGAGCCTTGGGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: SHRLVTDHIHTHAHTRAHHKECN*EPWART
Trigger: CGTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTG...GTGTGCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR TCA 90 bp GGAAGCTGGCGAGTGGCTCATAGGCATGGTTCCTCATGTGGCGGAACTCCACCAAGAGTGACCTTCCTGTaGTCTCTGCTCCAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GSWRVAHRHGSSCGGTPPRVTFL*SLLQQV
Trigger: CACTTGCTGGAGCAGAGATCACAGGAAGGTCACTCT...TGGTGGAGTTCCGCCACATGAGGAACCATGCCTATGAGCCACTCGCCAGCTTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000566322.6
ENST00000568101.5
CDS-3UTR TCA 90 bp GTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCAGAGTGACCTTCCTGTaGTCTCTGCTCCAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: VSEQCSRPPSARSCLVGGRVTFL*SLLQQV
Trigger: CACTTGCTGGAGCAGAGATCACAGGAAGGTCACTCT...GCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp CTAAGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGCCGCTAGGACAGCGTCCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LRTVSKRVRRTGQPLGQRPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...ACGCTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp GCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACAATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ARTAYYTPDRQVSHRLVTISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...TGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp CGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGAGCGAAGGCGCGGCGGTCTaGTTCAAACTCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: RTHTRTHTHTHTKSAIESEGAAV*FKLQDG
Trigger: CCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTC...GCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACATCCAGGGTTGCTACCTaGACCCTCGAAGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PRPQGSQVRELGRNMKVTSRVAT*TLEEQL
Trigger: AAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGA...TGTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCATGGGCCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGATTCAGCTTTACCTCGTaGTCAAAGAATCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LCPSHGPWLWERPTEGRGFSFTS*SKNRSS
Trigger: GGAGGACCGATTCTTTGAGCACGAGGTAAAGCTGAA...TCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCCCATGGGAAGGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp ACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 4 (lower is better)
Translates to: TASICSKLPSGWHLGTSSEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 4 (lower is better)
Translates to: QVSEQCSRPPSARSCLVGAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...ACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACTTTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: QVSHRLVTDHIHTHAHTLSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...AAGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS-3UTR CCA 90 bp ACATGCTTCTTAGATACATCAGCGGCTGTAACCACAGGGCTGAGGGGGCCTCCTAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TCFLDTSAAVTTGLRGPPKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...AGGAGGCCCCCTCAGCCCTGTGGTTACAGCCGCTGATGTATCTAAGAAGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp GCTGGCGAGTGGCTCATAGGCATGGTTCCTCATGTGGCGGAACTCCACCACCATGCGTGTCCACCAGAATaGCATTGTAGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGEWLIGMVPHVAELHHHACPPE*HCRAQQ
Trigger: CTGCTGAGCTCTACAATGCCATTCTGGTGGACACGC...ATGGTGGTGGAGTTCCGCCACATGAGGAACCATGCCTATGAGCCACTCGCCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp GATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACATCTTCAAACTCCAGGATaGGGCACATGGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: DGDDEGAAVCFKLQDGAHLQTPG*GTWHQP
Trigger: CGGCTGATGCCATGTGCCCCATCCTGGAGTTTGAAG...ATGTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR CCA 90 bp CTTGTCTCCAGGGTTGCTACCTGCACCCTCGAAGAGCAGCTTGTACTCCGGGTATGGCACGGTCCTCTTTaGACAGCTCTGTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: LVSRVATCTLEEQLVLRVWHGPL*TALCRK
Trigger: CTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCA...TACCCGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR CCA 90 bp AGCCCCTTTTCAGGCCTAAGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGGAGCCGCCCACAGTGTaGAAAGAGCTTGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: SPFSGLRTVSKRVRRTGQEPPTV*KELGTV
Trigger: GACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTC...CTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCTTAGGCCTGAAAAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp GGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCGGATGAGCCGCCCACAGTGTaGAAAGAGCTTGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: GAELVEGLQVGLVEGVADEPPTV*KELGTV
Trigger: GACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTC...ATCCGCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR CCA 90 bp CACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTAACTGTAACTGTGTaGGGATGCAGTGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HELSDGALVQRACDEQDHVTVTV*GCSEGS
Trigger: ACTGCCTTCACTGCATCCCCACACAGTTACAGTTAC...GTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564191.5
CDS-3UTR CCA 90 bp CTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCACCTCAGCCCTTGACTaGTCTAACAGTGCTACTTGC +
Preference number: 4 (lower is better)
Translates to: LSDGALVQRACDEQDHVVTSALD*SNSATC
Trigger: GCAAGTAGCACTGTTAGACCAGTCAAGGGCTGAGGT...GACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566322.6
3UTR CAA 72 bp TGGCGCTGGGCGATACATTCAGCGATCCACACGATGTaGCGACACTCCTGCTCCTTGAGCTTCACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: WRWAIHSAIHTM*RHSCSLSFTKA
Trigger: TGCCTTCGTGAAGCTCAAGGAGCAGGAGTGTCGCAACATCGTGTGGATCGCTGAATGTATCGCCCAGCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR GCA 90 bp TTGATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACTCCCGCCCAGTAGGGTaGAGAACTTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: LMVMMKARRSASNSRMGHSRPVG*RTCRRT
Trigger: AGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA...GTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR GCA 90 bp TGGTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGGTCATCGTCCCGCCCAGTAGGGTaGAGAACTTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: WFLMWRNSTTIFSLSRSSSRPVG*RTCRRT
Trigger: AGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA...CGATGACCGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
CDS-3UTR GCA 90 bp GGCCTAAGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGCCGCTAGGACAGTCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GLRTVSKRVRRTGQPLGQSCLQG*YLHPRR
Trigger: TCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGA...CTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCTTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp GTCTCCAGGGTTGCTACCTGCACCCTCGAAGAGCAGCTTGTACTCCGGGTAGTATCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: VSRVATCTLEEQLVLRVVSCLQG*YLHPRR
Trigger: TCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGA...TACTACCCGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR CCA 90 bp CACACACGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATTCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: HTRTHTRTHTHTHTKSAILVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...AATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000426604.7
CDS-3UTR CCA 90 bp CTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCGATCATGTAACTGTACTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: LVQRACDEQDHVVDHVTVLVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...TACAGTTACATGATCGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CTCCAGGGTTGCTACCTGCACCCTCGAAGAGCAGCTTGTACTCCGGGTAGTAATTGGCACGGTCCTCTTTaGACAGCTCTGTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: LQGCYLHPRRAACTPGSNWHGPL*TALCRK
Trigger: CTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCA...ATTACTACCCGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR CCA 90 bp GTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGGTCATCGATTGGCACGGTCCTCTTTaGACAGCTCTGTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: VPHVAELHHHLLLEPVIDWHGPL*TALCRK
Trigger: CTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCA...ATCGATGACCGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CCA 90 bp ACACGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGTTGGCGCGGTGGCGCTaGGCGATACATTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: TRTHTRTHTHTHTKSAIELARWR*AIHSAI
Trigger: GATCGCTGAATGTATCGCCCAGCGCCACCGCGCCAA...CTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CCA 90 bp GCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACTTGAGAGCCTCGATTTTGGCGCGGTaGCGCTGGGCGATACATTCA +
Preference number: 4 (lower is better)
Translates to: ATGLSQTTYTHTHTHLRASILAR*RWAIHS
Trigger: TGAATGTATCGCCCAGCGCCACCGCGCCAAAATCGA...GGCTCTCAAGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS-3UTR CCA 90 bp GGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCGGACTCTGGCATCCCTTGTaGCACCATCCATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GCRTCRRTPGRPCRGCCGLWHPL*HHPFLS
Trigger: GCTGAGGAATGGATGGTGCCACAAGGGATGCCAGAG...TCCGCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
3UTR CAA 72 bp GCACGGTCCTCTTTGGACAGCTCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCGCGGCGGTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ARSSLDSSVPKE*MVMMKARRSAS
Trigger: TGAAGCAGACCGCCGCGCCTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
3UTR CAA 72 bp TTTACCTCGTGCTCAAAGAATCGGTCCTCCAGCGTCTaGTCTCCAGGGTTGCTACCTGCACCCTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FTSCSKNRSSSV*SPGLLPAPSKS
Trigger: GCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCGATTCTTTGAGCACGAGGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR TCA 90 bp CTTGTACTCCGGGTAGTAATCGGCCACGTTCTTGACCTGTTCATAGTCGTCAGCAGCTCAGCAGGTGTCTaGGCAATGTTCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LVLRVVIGHVLDLFIVVSSSAGV*AMFTAS
Trigger: GGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCT...GCTGACGACTATGAACAGGTCAAGAACGTGGCCGATTACTACCCGGAGTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR TCA 90 bp CAGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: QAGEPQACHRPHTHTRTHRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...GTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
ENST00000602876.5
CDS-3UTR TCA 90 bp GCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: AQQVSEQCSRPPSARSCLRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...TAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR TCA 90 bp CTTCTTAGATACATCAGCGGCTGTAACCACAGGGCTGAGGGGGCCTCCTTGCTCAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: LLRYISGCNHRAEGASLLRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...GAGCAAGGAGGCCCCCTCAGCCCTGTGGTTACAGCCGCTGATGTATCTAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp GGCCTAAGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGCCGCTAGGACAGAATCGGCCACGTTCTTaGCCTGTTCATAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: GLRTVSKRVRRTGQPLGQNRPRS*PVHSRQ
Trigger: CTGACGACTATGAACAGGTCAAGAACGTGGCCGATT...CTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCTTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR TCA 90 bp ACATGCTTCTTAGATACATCAGCGGCTGTAACCACAGGGCTGAGGGGGCCTCCTGACACTCCTGCTCCTTaGGCTTCACGAAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: TCFLDTSAAVTTGLRGPPDTPAP*ASRRHR
Trigger: TCTATGCCTTCGTGAAGCTCAAGGAGCAGGAGTGTC...AGGAGGCCCCCTCAGCCCTGTGGTTACAGCCGCTGATGTATCTAAGAAGCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp CAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGTCTGTCACCAAAGATaGACTCAGGGTATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QVSEQCSRPPSARSCLVGVCHQR*TQGMRE
Trigger: CTCCCTCATACCCTGAGTTCATCTTTGGTGACAGAC...ACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564191.5
CDS-3UTR GCA 90 bp GAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCACAATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EPQACHRPHTHTRTHTRTISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...TGTGCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR GCA 90 bp ACCATCTTCTCCTTGAGCCGGTCATCGATGACTGACACCGTCAGAGGTGATGCCTCCCGCCCAGTAGGGTaGAGAACTTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: TIFSLSRSSMTDTVRGDASRPVG*RTCRRT
Trigger: AGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA...GGCATCACCTCTGACGGTGTCAGTCATCGATGACCGGCTCAAGGAGAAGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
CDS-3UTR GCA 90 bp CTCCAGGTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCTCCAGGGTTGCTACCTaGACCCTCGAAGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LQVGLVEGVADDLDVHLVSRVAT*TLEEQL
Trigger: AAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGA...GACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR GCA 90 bp ACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCTCCAGGGTTGCTACCTaGACCCTCGAAGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TRAHTHTHTQRVQLRALGSRVAT*TLEEQL
Trigger: AAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGA...GCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR GCA 90 bp GTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGGTCATCGATTCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: VPHVAELHHHLLLEPVIDSCLQG*YLHPRR
Trigger: TCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGA...ATCGATGACCGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR GCA 90 bp CAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCATGTTGCGACACTCCTaGTCCTTGAGCTTCACGAAG +
Preference number: 4 (lower is better)
Translates to: QVSHRLVTDHIHTHAHTRMLRHS*SLSFTK
Trigger: CTTCGTGAAGCTCAAGGAGCAGGAGTGTCGCAACAT...GCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR GCA 90 bp GTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACAATGTTGCGACACTCCTaGTCCTTGAGCTTCACGAAG +
Preference number: 4 (lower is better)
Translates to: VLHPGQAGEPQACHRPHTMLRHS*SLSFTK
Trigger: CTTCGTGAAGCTCAAGGAGCAGGAGTGTCGCAACAT...TGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp GCACGGTCCTCTTTGGACAGCTCTGTGCCGAAAGAATTGATGGTGATGATGAAGGGGAAGTCCACAGGCTaGCGGAGAGAGAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ARSSLDSSVPKELMVMMKGKSTG*RREKPL
Trigger: CAAGGGCTTCTCTCTCCGGCAGCCTGTGGACTTCCC...CTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR GCA 90 bp AGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGATTCCACAGTTAGGCTaGAGTAGCCACAACTATCCT +
Preference number: 4 (lower is better)
Translates to: SSAMERWCSVPVMSRITLIPQLG*SSHNYP
Trigger: AGGATAGTTGTGGCTACTGCAGCCTAACTGTGGAAT...CAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564191.5
CDS-3UTR CCA 90 bp CCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 4 (lower is better)
Translates to: PQAPGFSGQGVREEHESDEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...GTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp AGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCGATGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 4 (lower is better)
Translates to: SDGALVQRACDEQDHVVDEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...ATCGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGGCATGGTTCCTCATGTaGCGGAACTCCACCACCATC +
Preference number: 4 (lower is better)
Translates to: HTRTHTHTHTKSAIESLGAWFLM*RNSTTI
Trigger: GATGGTGGTGGAGTTCCGCCACATGAGGAACCATGC...CCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000426604.7
CDS-3UTR CCA 90 bp GCACGGTCCTCTTTGGACAGCTCTGTGCCGAAAGAATTGATGGTGATGATGAAGTCAGCGATGGAGCGCTaGTGCAGCGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: ARSSLDSSVPKELMVMMKSAMER*CSVPVM
Trigger: CATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA...CTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CCA 90 bp GCACGGTCCTCTTTGGACAGCTCTGTGCCGAAAGAATTGATGGTGATGATGAAGCTAGTGGGTGGCACTTaGGCACGAGCTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: ARSSLDSSVPKELMVMMKLVGGT*ARAQRW
Trigger: CCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAG...CTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CCA 90 bp CTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVEGVADDLDVHLVKVLLKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...GAGCAGGACCTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CCA 90 bp TCCACCACCATCTTCTCCTTGAGCCGGTCATCGATGACTGACACCGTCAGAGGTGCGTGTCCACCAGAATaGCATTGTAGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: STTIFSLSRSSMTDTVRGACPPE*HCRAQQ
Trigger: CTGCTGAGCTCTACAATGCCATTCTGGTGGACACGC...ACCTCTGACGGTGTCAGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CTCCAGGTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCCTTCAAACTCCAGGATaGGGCACATGGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: LQVGLVEGVADDLDVHLVLQTPG*GTWHQP
Trigger: CGGCTGATGCCATGTGCCCCATCCTGGAGTTTGAAG...GACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCCAGGACTGGCACGGTCCTCTTTaGACAGCTCTGTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTQRVQLRALGQDWHGPL*TALCRK
Trigger: CTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCA...GTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CCA 90 bp ATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACATGAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: MVMMKARRSASNSRMGHMSVERA*HGPLWT
Trigger: TGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACT...CATGTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CCA 90 bp TTGATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: LMVMMKARRSASNSRMGHSVERA*HGPLWT
Trigger: TGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACT...GTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CCA 90 bp TTGATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACTCCTCAGCCCTTGACTaGTCTAACAGTGCTACTTGC +
Preference number: 4 (lower is better)
Translates to: LMVMMKARRSASNSRMGHSSALD*SNSATC
Trigger: GCAAGTAGCACTGTTAGACCAGTCAAGGGCTGAGGA...GTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR CCA 90 bp AACTCCACCACCATCTTCTCCTTGAGCCGGTCATCGATGACTGACACCGTCAGAAGGGACAAGTCCCTCTaGCATCCCTTGTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: NSTTIFSLSRSSMTDTVRRDKSL*HPLWHH
Trigger: ATGGTGCCACAAGGGATGCCAGAGGGACTTGTCCCT...TCTGACGGTGTCAGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGTGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR CCA 90 bp TGTCTCCAGGGTTGCTACCTGCACCCTCGAAGAGCAGCTTGTACTCCGGGTAGTCATCAGCACTGTCACTaGACTGTCATCACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CLQGCYLHPRRAACTPGSHQHCH*TVITQG
Trigger: TCCCTGAGTGATGACAGTCCAGTGACAGTGCTGATG...ACTACCCGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR CCA 90 bp ATAGGCATGGTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGCTCTGGCATCCCTTGTaGCACCATCCATTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: IGMVPHVAELHHHLLLEPLWHPL*HHPFPL
Trigger: TAGAGGGAATGGATGGTGCCACAAGGGATGCCAGAG...CGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAACCATGCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563064.5
3UTR CAA 72 bp CGCCCACAGTGTGGAAAGAGCTTGGCACGGTCCTCTTaGGACAGCTCTGTGCCGAAAGAATTGATGGTGATG +
Preference number: 4 (lower is better)
Translates to: RPQCGKSLARSS*DSSVPKELMVM
Trigger: CATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR TCA 90 bp TTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCAGCTCAGCAGGTGTCTaGGCAATGTTCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LRMISMFISSRSCSEMQSSSAGV*AMFTAS
Trigger: GGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCT...GGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR TCA 90 bp GTCTCCAGGGTTGCTACCTGCACCCTCGAAGAGCAGCTTGTACTCCGGGTAGTAGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: VSRVATCTLEEQLVLRVVVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...TACTACCCGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR TCA 90 bp TTGATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LMVMMKARRSASNSRMGHVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...GTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR TCA 90 bp AGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACAAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: RQVSHRLVTDHIHTHAHTRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...TGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
ENST00000602876.5
CDS-3UTR TCA 90 bp TCCACCACCATCTTCTCCTTGAGCCGGTCATCGATGACTGACACCGTCAGAGGTAATCGGCCACGTTCTTaGCCTGTTCATAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: STTIFSLSRSSMTDTVRGNRPRS*PVHSRQ
Trigger: CTGACGACTATGAACAGGTCAAGAACGTGGCCGATT...ACCTCTGACGGTGTCAGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR TCA 90 bp GTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCGACACTCCTGCTCCTTaGGCTTCACGAAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: VGCRTCRRTPGRPCRGCCDTPAP*ASRRHR
Trigger: TCTATGCCTTCGTGAAGCTCAAGGAGCAGGAGTGTC...GCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR TCA 90 bp GCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCCAGGACGACACTCCTGCTCCTTaGGCTTCACGAAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTQRVQLRALGQDDTPAP*ASRRHR
Trigger: TCTATGCCTTCGTGAAGCTCAAGGAGCAGGAGTGTC...GTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR TCA 90 bp CCAGTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTAGAGTGACCTTCCTGTaGTCTCTGCTCCAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PVGCRTCRRTPGRPCRGCRVTFL*SLLQQV
Trigger: CACTTGCTGGAGCAGAGATCACAGGAAGGTCACTCT...ACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000566322.6
CDS-3UTR GCA 90 bp CTTCTTAGATACATCAGCGGCTGTAACCACAGGGCTGAGGGGGCCTCCTTGCTCTCAGTGCTCTGCAGATaGAGTTTCAAGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LLRYISGCNHRAEGASLLSVLCR*SFKSSS
Trigger: GCTAGAGGACTTGAAACTGCATCTGCAGAGCACTGA...GAGCAAGGAGGCCCCCTCAGCCCTGTGGTTACAGCCGCTGATGTATCTAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR GCA 90 bp ATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCTGGAAAGCGATGGAGCGCTGGTaGAGCGTGCCTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: MISMFISSRSCSEMQSWKAMERW*SVPVMS
Trigger: GCTCATCACAGGCACGCTGCACCAGCGCTCCATCGC...TTTCCAGGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp AGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACAATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RQVSHRLVTDHIHTHAHTISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...TGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
ENST00000602876.5
CDS-3UTR GCA 90 bp TCCCGCCCAGTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRPVGCRTCRRTPGRPCRISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...TCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR GCA 90 bp GTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGGTCATCGATATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VPHVAELHHHLLLEPVIDISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...ATCGATGACCGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp CATTGTAGAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGATCCCGCCCAGTAGGGTaGAGAACTTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: HCRAQQVSEQCSRPPSARSRPVG*RTCRRT
Trigger: AGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA...TCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTCTACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR GCA 90 bp GATGAGCAGGATCACGTTGTCGATCATGTAACTGTAACTGTGTGGGGATGCAGTGAAGGCGCGGCGGTCTaGTTCAAACTCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: DEQDHVVDHVTVTVWGCSEGAAV*FKLQDG
Trigger: CCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTC...ACTGCATCCCCACACAGTTACAGTTACATGATCGACAACGTGATCCTGCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564191.5
CDS-3UTR GCA 90 bp CACACACGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATTTCCAGGGTTGCTACCTaGACCCTCGAAGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: HTRTHTRTHTHTHTKSAISRVAT*TLEEQL
Trigger: AAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGA...AATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR GCA 90 bp CAGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACTTCAGCTTTACCTCGTaGTCAAAGAATCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QAGEPQACHRPHTHTRTHFSFTS*SKNRSS
Trigger: GGAGGACCGATTCTTTGAGCACGAGGTAAAGCTGAA...GTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CCA 90 bp GATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACATGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 4 (lower is better)
Translates to: DGDDEGAAVCFKLQDGAHEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...ATGTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR CCA 90 bp TTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LRMISMFISSRSCSEMQSKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...GGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CTCATAGGCATGGTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGGCGTGTCCACCAGAATaGCATTGTAGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LIGMVPHVAELHHHLLLEACPPE*HCRAQQ
Trigger: CTGCTGAGCTCTACAATGCCATTCTGGTGGACACGC...CTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAACCATGCCTATGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp CAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACTTGCGTGTCCACCAGAATaGCATTGTAGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QVSHRLVTDHIHTHAHTLACPPE*HCRAQQ
Trigger: CTGCTGAGCTCTACAATGCCATTCTGGTGGACACGC...AAGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS-3UTR CCA 90 bp GGCATTGTAGAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: GIVELSRCLSNVHGLHLLSVERA*HGPLWT
Trigger: TGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACT...GAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTCTACAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CCA 90 bp CGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCTGGTCGATTTTGGCGCGGTaGCGCTGGGCGATACATTCA +
Preference number: 4 (lower is better)
Translates to: RMISMFISSRSCSEMQSWSILAR*RWAIHS
Trigger: TGAATGTATCGCCCAGCGCCACCGCGCCAAAATCGA...CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR CCA 90 bp CGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCTGGAGGGACAAGTCCCTCTaGCATCCCTTGTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: RMISMFISSRSCSEMQSWRDKSL*HPLWHH
Trigger: ATGGTGCCACAAGGGATGCCAGAGGGACTTGTCCCT...CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR TCA 90 bp CTAAGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGCCGCTAGGACAGCGTGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LRTVSKRVRRTGQPLGQRVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...ACGCTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR TCA 90 bp GTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGGTCATCGATGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: VPHVAELHHHLLLEPVIDVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...ATCGATGACCGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR TCA 90 bp GTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCAATCGGCCACGTTCTTaGCCTGTTCATAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: VGCRTCRRTPGRPCRGCCNRPRS*PVHSRQ
Trigger: CTGACGACTATGAACAGGTCAAGAACGTGGCCGATT...GCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR GCA 90 bp TCCCGCCCAGTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGATCAGTGCTCTGCAGATaGAGTTTCAAGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SRPVGCRTCRRTPGRPCRSVLCR*SFKSSS
Trigger: GCTAGAGGACTTGAAACTGCATCTGCAGAGCACTGA...TCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564191.5
ENST00000564788.1
CDS-3UTR GCA 90 bp CCAGTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVGCRTCRRTPGRPCRGCISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...ACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR GCA 90 bp ACCACCATCTTCTCCTTGAGCCGGTCATCGATGACTGACACCGTCAGAGGTGATTCAGTGCTCTGCAGATaGAGTTTCAAGTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TTIFSLSRSSMTDTVRGDSVLCR*SFKSQP
Trigger: GGGCTGAGACTTGAAACTGCATCTGCAGAGCACTGA...ATCACCTCTGACGGTGTCAGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568101.5
CDS-3UTR CCA 90 bp GGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCGGAGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 4 (lower is better)
Translates to: GCRTCRRTPGRPCRGCCGEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...TCCGCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR CCA 90 bp CAGGTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGCGTGTCCACCAGAATaGCATTGTAGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QVGLVEGVADDLDVHLVKACPPE*HCRAQQ
Trigger: CTGCTGAGCTCTACAATGCCATTCTGGTGGACACGC...CTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CCA 90 bp AGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCTTCAAACTCCAGGATaGGGCACATGGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: RVLRMISMFISSRSCSEMLQTPG*GTWHQP
Trigger: CGGCTGATGCCATGTGCCCCATCCTGGAGTTTGAAG...CATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCGCAACACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CCA 90 bp ACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: TRAHTHTHTQRVQLRALGSVERA*HGPLWT
Trigger: TGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACT...GCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CCA 90 bp ATAGGCATGGTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGACACCAAAGTGGAACTaGTTCAGGAAGGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: IGMVPHVAELHHHLLLEPTPKWN*FRKANL
Trigger: CAAGTTGGCCTTCCTGAACCAGTTCCACTTTGGTGT...CGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAACCATGCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR TCA 90 bp GCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCCAGGACGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTQRVQLRALGQDVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...GTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR TCA 90 bp GTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: VGCRTCRRTPGRPCRGCCVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...GCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR TCA 90 bp CTTGTACTCCGGGTAGTAATCGGCCACGTTCTTGACCTGTTCATAGTCGTCAGCAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: LVLRVVIGHVLDLFIVVSRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...GCTGACGACTATGAACAGGTCAAGAACGTGGCCGATTACTACCCGGAGTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR TCA 90 bp CTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: LVEGVADDLDVHLVKVLLRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...GAGCAGGACCTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR TCA 90 bp ACACACACGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATAATCGGCCACGTTCTTaGCCTGTTCATAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: THTHTHAHTHTHTHKECNNRPRS*PVHSRQ
Trigger: CTGACGACTATGAACAGGTCAAGAACGTGGCCGATT...ATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR GCA 90 bp CGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCTGGATCTCGTCAAGGTCCTaGTCTGAAATGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RMISMFISSRSCSEMQSWISSRS*SEMQSW
Trigger: CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGAT...CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp CCAACTTGTTCAGCTTTACCTCGTGCTCAAAGAATCGGTCCTCCAGCGTCTTGTTCCCGCCCAGTAGGGTaGAGAACTTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: PTCSALPRAQRIGPPASCSRPVG*RTCRRT
Trigger: AGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA...ACAAGACGCTGGAGGACCGATTCTTTGAGCACGAGGTAAAGCTGAACAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR GCA 90 bp CATTCAGCGATCCACACGATGTTGCGACACTCCTGCTCCTTGAGCTTCACGAAGTTCAGCTTTACCTCGTaGTCAAAGAATCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HSAIHTMLRHSCSLSFTKFSFTS*SKNRSS
Trigger: GGAGGACCGATTCTTTGAGCACGAGGTAAAGCTGAA...CTTCGTGAAGCTCAAGGAGCAGGAGTGTCGCAACATCGTGTGGATCGCTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR GCA 90 bp CTCTTTGGACAGCTCTGTGCCGAAAGAATTGATGGTGATGATGAAGGCGCGGCGTCAGTGCTCTGCAGATaGAGTTTCAAGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LFGQLCAERIDGDDEGAASVLCR*SFKSDR
Trigger: CCTGTCAGACTTGAAACTGCATCTGCAGAGCACTGA...CGCCGCGCCTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR CCA 90 bp GTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCGAGGTGATGCCTCGTTaGCCAGGAAGTTACCATAAT +
Preference number: 4 (lower is better)
Translates to: VGCRTCRRTPGRPCRGCCEVMPR*PGSYHN
Trigger: ATTATGGTAACTTCCTGGCCAACGAGGCATCACCTC...GCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR CCA 90 bp ATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCTGGAAAAAGCTGCCTAGTGGGTaGCACTTGGGCACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: MISMFISSRSCSEMQSWKKLPSG*HLGTSS
Trigger: TGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTT...TTTCCAGGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CCA 90 bp ACACCGTCAGAGGTGATGCCTCGTTGGCCAGGAAGTTACCATAATCAGTGCTCTAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: TPSEVMPRWPGSYHNQCSSVERA*HGPLWT
Trigger: TGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACT...AGAGCACTGATTATGGTAACTTCCTGGCCAACGAGGCATCACCTCTGACGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
CDS-3UTR TCA 90 bp TTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACATGCTTCTTAGATACAGCTCAGCAGGTGTCTaGGCAATGTTCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FSGQGVREEHESDMLLRYSSAGV*AMFTAS
Trigger: GGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCT...GTATCTAAGAAGCATGTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR TCA 90 bp GAGCAGCTTGTACTCCGGGTAGTAATCGGCCACGTTCTTGACCTGTTCATAGTCGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: EQLVLRVVIGHVLDLFIVVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...GACTATGAACAGGTCAAGAACGTGGCCGATTACTACCCGGAGTACAAGCTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR TCA 90 bp GTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCGTCAAGGTCCTGCTCTaGAATGCAGTCCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: VGLVEGVADDLDVHLVKVVKVLL*NAVLEK
Trigger: TTTTTCCAGGACTGCATTTCAGAGCAGGACCTTGAC...GACCTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR GCA 90 bp CGTGCCTGTGATGAGCAGGATCACGTTGTCGATCATGTAACTGTAAGTAATGAACCATCTGCTCGAAGCTaGCTAGTGGGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: RACDEQDHVVDHVTVSNEPSARS*LVGGTW
Trigger: CCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGG...TTCATTACTTACAGTTACATGATCGACAACGTGATCCTGCTCATCACAGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR GCA 90 bp CAGGTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGTCAGTGCTCTGCAGATaGAGTTTCAAGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: QVGLVEGVADDLDVHLVKSVLCR*SFKSDR
Trigger: CCTGTCAGACTTGAAACTGCATCTGCAGAGCACTGA...CTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR CCA 90 bp ACACACACGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATACACCAAAGTGGAACTaGTTCAGGAAGGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: THTHTHAHTHTHTHKECNTPKWN*FRKANL
Trigger: CAAGTTGGCCTTCCTGAACCAGTTCCACTTTGGTGT...ATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CCA 90 bp ACACGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGACACCAAAGTGGAACTaGTTCAGGAAGGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: TRTHTRTHTHTHTKSAIETPKWN*FRKANL
Trigger: CAAGTTGGCCTTCCTGAACCAGTTCCACTTTGGTGT...CTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CCA 90 bp AGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGGTCTCAGCCCTTGACTaGTCTAACAGTGCTACTTGC +
Preference number: 4 (lower is better)
Translates to: RVLRMISMFISSRSCSEMVSALD*SNSATC
Trigger: GCAAGTAGCACTGTTAGACCAGTCAAGGGCTGAGAC...CATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCGCAACACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568101.5
CDS-3UTR TCA 90 bp GATGAGCAGGATCACGTTGTCGATCATGTAACTGTAACTGTGTGGGGATGCAGTAGAGGGTGTTGCGGATaGTCTCGATGTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: DEQDHVVDHVTVTVWGCSRGCCG*SRCSSR
Trigger: ACGAGATGAACATCGAGATCATCCGCAACACCCTCT...ACTGCATCCCCACACAGTTACAGTTACATGATCGACAACGTGATCCTGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564191.5
CDS-3UTR TCA 90 bp GGGAGGAACATGAAAGTGACATGCTTCTTAGATACATCAGCGGCTGTAACCACAGACACTCCTGCTCCTTaGGCTTCACGAAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: GRNMKVTCFLDTSAAVTTDTPAP*ASRRHR
Trigger: TCTATGCCTTCGTGAAGCTCAAGGAGCAGGAGTGTC...TGTGGTTACAGCCGCTGATGTATCTAAGAAGCATGTCACTTTCATGTTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
3UTR CAA 72 bp AAGACACCAAAGTGGAACTGGTTCAGGAAGGCCAACTaGTTCAGCTTTACCTCGTGCTCAAAGAATCGGTCC +
Preference number: 4 (lower is better)
Translates to: KTPKWNWFRKAN*FSFTSCSKNRS
Trigger: GGACCGATTCTTTGAGCACGAGGTAAAGCTGAACAAGTTGGCCTTCCTGAACCAGTTCCACTTTGGTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR GCA 90 bp GTTAGGGAGGAACATGAAAGTGACATGCTTCTTAGATACATCAGCGGCTGTAACTCCCGCCCAGTAGGGTaGAGAACTTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: VREEHESDMLLRYISGCNSRPVG*RTCRRT
Trigger: AGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA...GTTACAGCCGCTGATGTATCTAAGAAGCATGTCACTTTCATGTTCCTCCCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CCA 90 bp CGTGCCTGTGATGAGCAGGATCACGTTGTCGATCATGTAACTGTAAGTAATGAAGTCCTCCAAATTGAATaGTTCGCTGTCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: RACDEQDHVVDHVTVSNEVLQIE*FAVTFT
Trigger: GGTGAAGGTGACAGCGAACCATTCAATTTGGAGGAC...TTCATTACTTACAGTTACATGATCGACAACGTGATCCTGCTCATCACAGGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566322.6
CDS TCA 90 bp TCCTGCCAGCCGGGGCACTCACCGGGTAGTAATCGGCCACGTTCTTaGCCTGTTCATAGTCGTCAGCCCGAGCCAGCTGCGCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: SCQPGHSPGSNRPRS*PVHSRQPEPAAPGP
Trigger: AGGGCCTGGCGCAGCTGGCTCGGGCTGACGACTATGAACAGGTCAAGAACGTGGCCGATTACTACCCGGTGAGTGCCCCGGCTGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS TCA 90 bp CACGGCACAGAGTGCCCGTGCCACAAGGCCCACAGGGCTGGGTATTaGGGGGTCCCCAGCCTAGGCTGTTGCCTTGGAAGTGGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: HGTECPCHKAHRAGY*GVPSLGCCLGSGRS
Trigger: GCTTCTGCCACTTCCAAGGCAACAGCCTAGGCTGGGGACCCCTCAATACCCAGCCCTGTGGGCCTTGTGGCACGGGCACTCTGTGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567170.5
CDS GCA 90 bp GCCATTGTCCACGTTAAAGTAAAGCTCCGGGAAGAACGACATGGCTaGTGCGGGAGCGGCGGGACCGGAGAACCAGGACCGGCCGGCACG +
Preference number: 5 (lower is better)
Translates to: AIVHVKVKLREERHG*CGSGGTGEPGPAGT
Trigger: CGTGCCGGCCGGTCCTGGTTCTCCGGTCCCGCCGCTCCCGCAGCAGCCATGTCGTTCTTCCCGGAGCTTTACTTTAACGTGGACAATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290949.8
ENST00000561658.5
ENST00000561852.5
ENST00000563064.5
ENST00000564788.1
ENST00000568298.1
CDS GCA 90 bp CGCCCTGTCCCCTGGAGTCTGCCAATCCACGGCTGCTGCACCAGCTaGCTACTGTTCCCACCTGCTGGGTGGTTGAGGGTCCGCCTAATC +
Preference number: 5 (lower is better)
Translates to: RPVPWSLPIHGCCTS*LLFPPAGWLRVRLI
Trigger: GATTAGGCGGACCCTCAACCACCCAGCAGGTGGGAACAGTAGGCAGCTGGTGCAGCAGCCGTGGATTGGCAGACTCCAGGGGACAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp GCGCCAGGCCCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACAGCTCTCCAGGATGGGGCACATGGC +
Preference number: 5 (lower is better)
Translates to: APGPQGRAAHSVERA*HGPLWTALQDGAHG
Trigger: GCCATGTGCCCCATCCTGGAGAGCTGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCCTGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564615.5
CDS CCA 90 bp CCGAGCCAGCTGCGCCAGGCCCTCAGGGTAGAGCCGCCCACAGTGTaGAAAGAGCTTGGCACGGTCCTCTTTGGACAGCTCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: PSQLRQALRVEPPTV*KELGTVLFGQLSRM
Trigger: CATCCTGGAGAGCTGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGGGCCTGGCGCAGCTGGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564615.5
CDS CCA 90 bp TGCCCTACACGGCACAGAGTGCCCGTGCCACAAGGCCCACAGGGCTaGGTATTGAGGGGTCCCCAGCCTAGGCTGTTGCCTTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: CPTRHRVPVPQGPQG*VLRGPQPRLLPWKW
Trigger: CCACTTCCAAGGCAACAGCCTAGGCTGGGGACCCCTCAATACCCAGCCCTGTGGGCCTTGTGGCACGGGCACTCTGTGCCGTGTAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567170.5
CDS-3UTR CAA 90 bp CCTGTTCATAGTCGTCAGCCCGAGCCAGCTGCGCCAGGCCCTCAGGGTAGAGCCCGGTCCTCCAGCGTCTaGTCTCCAGGGTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: PVHSRQPEPAAPGPQGRARSSSV*SPGLLP
Trigger: AGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCG...GGCTCTACCCTGAGGGCCTGGCGCAGCTGGCTCGGGCTGACGACTATGAACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000561852.5
CDS CCA 90 bp TTGGGTGGTGGCACTCCTGCCAGTGACTCCACTATTCCCTGGGACTaGGAGTCTGGACCCCGGTCTGGCCTCCTGATCCCTCCCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LGGGTPASDSTIPWD*ESGPRSGLLIPPLQ
Trigger: TTGGAGGGGAGGGATCAGGAGGCCAGACCGGGGTCCAGACTCCCAGTCCCAGGGAATAGTGGAGTCACTGGCAGGAGTGCCACCACCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp AGTCCTTTGGGTGGTGGCACTCCTGCCAGTGACTCCACTATTCCCTaGGACTGGGAGTCTGGACCCCGGTCTGGCCTCCTGATCCCTCCC +
Preference number: 5 (lower is better)
Translates to: SPLGGGTPASDSTIP*DWESGPRSGLLIPP
Trigger: GGGAGGGATCAGGAGGCCAGACCGGGGTCCAGACTCCCAGTCCCAGGGAATAGTGGAGTCACTGGCAGGAGTGCCACCACCCAAAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp ATCCACGGCTGCTGCACCAGCTGCCTACTGTTCCCACCTGCTGGGTaGTTGAGGGTCCGCCTAATCTCCCATCTGTGGTCACCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: IHGCCTSCLLFPPAG*LRVRLISHLWSPGW
Trigger: CCAGCCCGGTGACCACAGATGGGAGATTAGGCGGACCCTCAACCACCCAGCAGGTGGGAACAGTAGGCAGCTGGTGCAGCAGCCGTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp GCCAATCCACGGCTGCTGCACCAGCTGCCTACTGTTCCCACCTGCTaGGTGGTTGAGGGTCCGCCTAATCTCCCATCTGTGGTCACCGGG +
Preference number: 5 (lower is better)
Translates to: ANPRLLHQLPTVPTC*VVEGPPNLPSVVTG
Trigger: CCCGGTGACCACAGATGGGAGATTAGGCGGACCCTCAACCACCCAGCAGGTGGGAACAGTAGGCAGCTGGTGCAGCAGCCGTGGATTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS-3UTR CAA 90 bp CACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: HELSDGALVQRACDEQDHPSGWH*GTSSAM
Trigger: CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG...GTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CAA 90 bp GGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGTTGGCACGGTCCTCTTaGGACAGCTCTGTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: GWHLGTSSAMERWCSVPVLARSS*DSSVPK
Trigger: TTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAA...CACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CAA 90 bp GGCCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCGTCTTGTCTCCAGGGTaGCTACCTGCACCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: GHGSGSDPQKGEEAQTAPVLSPG*LPAPSK
Trigger: CTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGAC...GGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CAA 90 bp AGGGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTCGGTCCTCCAGCGTCTaGTCTCCAGGGTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: RERRLKLPPGPRVLRSGSRSSSV*SPGLLP
Trigger: AGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCG...ACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS TCA 90 bp CCATGTAGCCCTGAAGCTGGAGTTCTGCCTCTCCCCCACAGCCTGTaGGGCCCCGTGCCCTCAGCCCTAGCATTACCTCAGCCCTTGACT +
Preference number: 5 (lower is better)
Translates to: PCSPEAGVLPLPHSL*GPVPSALALPQPLT
Trigger: AGTCAAGGGCTGAGGTAATGCTAGGGCTGAGGGCACGGGGCCTCACAGGCTGTGGGGGAGAGGCAGAACTCCAGCTTCAGGGCTACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566322.6
CDS TCA 90 bp CGGGAACAAGCACTCCCTGCCCAGGCAAATTGGATCTGCTGGGCATaGGGAAAGAAGAGGTCAGCCCAGGCCCCAGGTCCCTCCCAACGC +
Preference number: 5 (lower is better)
Translates to: REQALPAQANWICWA*GKKRSAQAPGPSQR
Trigger: GCGTTGGGAGGGACCTGGGGCCTGGGCTGACCTCTTCTTTCCTCATGCCCAGCAGATCCAATTTGCCTGGGCAGGGAGTGCTTGTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 90 bp GCAAGGAGACTCTCAGGAAAGGAGGCCTGTGGCCAGGAGAGGGCCTaGTTCCTAGCTTGGGCATGTTCCCTGGCCCTTCAGGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: ARRLSGKEACGQERA*FLAWACSLALQVSQ
Trigger: CTGGGACACCTGAAGGGCCAGGGAACATGCCCAAGCTAGGAAGCAGGCCCTCTCCTGGCCACAGGCCTCCTTTCCTGAGAGTCTCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540149.5
ENST00000561658.5
CDS CCA 90 bp TCAGGAAAGGAGGCCTGTGGCCAGGAGAGGGCCTGCTTCCTAGCTTaGGCATGTTCCCTGGCCCTTCAGGTGTCCCAGCCTCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: SGKEACGQERACFLA*ACSLALQVSQPLTP
Trigger: AGGAGTCAGAGGCTGGGACACCTGAAGGGCCAGGGAACATGCCCAAGCTAGGAAGCAGGCCCTCTCCTGGCCACAGGCCTCCTTTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540149.5
ENST00000561658.5
CDS CCA 90 bp GATCAAAGGCGGAGCTGCACTTGGGACCACCTCCACACGCTGTCCTaGCCACGGCCTCCCCAGATGTCTTTGAGGCTCAGGAGACCATGC +
Preference number: 5 (lower is better)
Translates to: DQRRSCTWDHLHTLS*PRPPQMSLRLRRPC
Trigger: GCATGGTCTCCTGAGCCTCAAAGACATCTGGGGAGGCCGTGGCCAGGACAGCGTGTGGAGGTGGTCCCAAGTGCAGCTCCGCCTTTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS-3UTR CAA 90 bp TCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCGCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: SAMERWCSVPVMSRITLSPSGWH*GTSSAM
Trigger: CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG...CGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CAA 90 bp GGCCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCCAGTGTGGAAAGAGCTaGGCACGGTCCTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: GHGSGSDPQKGEEAQTAPQCGKS*ARSSLD
Trigger: GTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTG...GGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CAA 90 bp GGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGTCTTGTCTCCAGGGTaGCTACCTGCACCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: GGSNCPQAPGFSGQGVREVLSPG*LPAPSK
Trigger: CTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGAC...CTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CAA 90 bp CACGTTCTTGACCTGTTCATAGTCGTCAGCCCGAGCCAGCTGCGCCAGGCCCTCCGGTCCTCCAGCGTCTaGTCTCCAGGGTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: HVLDLFIVVSPSQLRQALRSSSV*SPGLLP
Trigger: AGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCG...GAGGGCCTGGCGCAGCTGGCTCGGGCTGACGACTATGAACAGGTCAAGAACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000561852.5
CDS-3UTR CAA 90 bp GTCAGGAGAACTGGGCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGGCGATCCACACGATGTaGCGACACTCCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: VRRTGQPLGQRTTPRTGRAIHTM*RHSCSL
Trigger: CAAGGAGCAGGAGTGTCGCAACATCGTGTGGATCGC...CCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGCCCAGTTCTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CAA 90 bp CACAGGGCTGAGGGGGCCTCCTTGCTCTGGAGGGGGTCTTCGTCCATCCTTGGTGCGATCCACACGATGTaGCGACACTCCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: HRAEGASLLWRGSSSILGAIHTM*RHSCSL
Trigger: CAAGGAGCAGGAGTGTCGCAACATCGTGTGGATCGC...ACCAAGGATGGACGAAGACCCCCTCCAGAGCAAGGAGGCCCCCTCAGCCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS GCA 90 bp ATTGTCCACGTTAAAGTAAAGCTCCGGGAAGAACGACATGGCTGCTaGGGGAGCGGCGGGACCGGAGAACCAGGACCGGCCGGCACGAAT +
Preference number: 5 (lower is better)
Translates to: IVHVKVKLREERHGC*GSGGTGEPGPAGTN
Trigger: ATTCGTGCCGGCCGGTCCTGGTTCTCCGGTCCCGCCGCTCCCGCAGCAGCCATGTCGTTCTTCCCGGAGCTTTACTTTAACGTGGACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290949.8
ENST00000561658.5
ENST00000561852.5
ENST00000563064.5
ENST00000564788.1
ENST00000568298.1
CDS GCA 90 bp CCGGGCATCTGTGTACACACTGCTCTTCCAGGCCCTGGCACAAGCTaGTGGGAGGCTTCCCCGAGTGAGCTGTCACCTCCTACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: PGICVHTALPGPGTS*WEASPSELSPPTQD
Trigger: ATCCTGAGTAGGAGGTGACAGCTCACTCGGGGAAGCCTCCCAGCAGCTTGTGCCAGGGCCTGGAAGAGCAGTGTGTACACAGATGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 90 bp TCTGCCAATCCACGGCTGCTGCACCAGCTGCCTACTGTTCCCACCTaGTGGGTGGTTGAGGGTCCGCCTAATCTCCCATCTGTGGTCACC +
Preference number: 5 (lower is better)
Translates to: SANPRLLHQLPTVPT*WVVEGPPNLPSVVT
Trigger: GGTGACCACAGATGGGAGATTAGGCGGACCCTCAACCACCCAGCAGGTGGGAACAGTAGGCAGCTGGTGCAGCAGCCGTGGATTGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp TTGCCTACACGGACGTCAGCTGGGCACAGTACAATGGCAGGCACATaGGCTGCCGGCGGGAACAAGCACTCCCTGCCCAGGCAAATTGGA +
Preference number: 5 (lower is better)
Translates to: LPTRTSAGHSTMAGT*AAGGNKHSLPRQIG
Trigger: TCCAATTTGCCTGGGCAGGGAGTGCTTGTTCCCGCCGGCAGCCCATGTGCCTGCCATTGTACTGTGCCCAGCTGACGTCCGTGTAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp AGGGATGGTTATTGCCTACACGGACGTCAGCTGGGCACAGTACAATaGCAGGCACATGGGCTGCCGGCGGGAACAAGCACTCCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: RDGYCLHGRQLGTVQ*QAHGLPAGTSTPCP
Trigger: TGGGCAGGGAGTGCTTGTTCCCGCCGGCAGCCCATGTGCCTGCCATTGTACTGTGCCCAGCTGACGTCCGTGTAGGCAATAACCATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS-3UTR CAA 90 bp AGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCGATCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: SDGALVQRACDEQDHVVDPSGWH*GTSSAM
Trigger: CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG...ATCGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CAA 90 bp GTCAGGAGAACTGGGCAGCCGCTAGGACAGCGTACTACACCCCGGACAGGCAGGTTGGCACGGTCCTCTTaGGACAGCTCTGTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: VRRTGQPLGQRTTPRTGRLARSS*DSSVPK
Trigger: TTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAA...CCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGCGGCTGCCCAGTTCTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CAA 90 bp CAGAAGGGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGCAGTGTGGAAAGAGCTaGGCACGGTCCTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: QKGEEAQTAPRPQGSQVRQCGKS*ARSSLD
Trigger: GTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTG...CCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCCCTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CAA 90 bp CCATGGCTCTGGGAGCGACCCACAGAAGGGAGAGGAGGCTCAAACTGCCCCCAGGTGCAATTGAGAGCCTaGGGCCAGGACGCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: PWLWERPTEGRGGSNCPQVQLRA*GQDARR
Trigger: TCTTCTAGCGTCCTGGCCCAAGGCTCTCAATTGCAC...CTGGGGGCAGTTTGAGCCTCCTCTCCCTTCTGTGGGTCGCTCCCAGAGCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290949.8
CDS GCA 90 bp CCTCGTGCTCAAAGAATCGGTCCTCCAGCGTCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGAGCAGCTTGTACTCCTGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: PRAQRIGPPASCLQG*YLHPRRAACTPGQG
Trigger: CCCCTGGCCAGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCGATTCTTTGAGCACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS GCA 90 bp GTCAGACCCAGGCACTGGTGCGGCAGCTGCCAGACCAAACCTGTCTaGTTATTCACACAGCCACTGCAGCCAGCCAAGAGCCCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: VRPRHWCGSCQTKPV*LFTQPLQPAKSPSQ
Trigger: CTGAGAAGGGCTCTTGGCTGGCTGCAGTGGCTGTGTGAATAAGCAGACAGGTTTGGTCTGGCAGCTGCCGCACCAGTGCCTGGGTCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 90 bp CCCTGTCTCAGGGCAGGCAACCCGGCAACAGGCCAGCTAGGCGCGTaGGTACACACACACACACAAACACACACGTGTGTATGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PCLRAGNPATGQLGA*VHTHTQTHTCVCSL
Trigger: GAGAGAGCATACACACGTGTGTGTTTGTGTGTGTGTGTGTACGCACGCGCCTAGCTGGCCTGTTGCCGGGTTGCCTGCCCTGAGACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp GCCCTTACAGCAAAGCCAATGAAACACTTCTGTGAATCAGCCAAGTaGCAGCTGCCCACAGCCTCCCACCCAGGAGTGCCAGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: ALTAKPMKHFCESAK*QLPTASHPGVPGQG
Trigger: GCCCTGCCCTGGCACTCCTGGGTGGGAGGCTGTGGGCAGCTGCCACTTGGCTGATTCACAGAAGTGTTTCATTGGCTTTGCTGTAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563305.1
ENST00000568620.5
CDS CCA 90 bp GGCATCTGTGTACACACTGCTCTTCCAGGCCCTGGCACAAGCTGCTaGGAGGCTTCCCCGAGTGAGCTGTCACCTCCTACTCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: GICVHTALPGPGTSC*EASPSELSPPTQDP
Trigger: AGGATCCTGAGTAGGAGGTGACAGCTCACTCGGGGAAGCCTCCCAGCAGCTTGTGCCAGGGCCTGGAAGAGCAGTGTGTACACAGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS-3UTR CAA 90 bp GGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGACCACCATCTTCTCCTaGAGCCGGTCATCGATGACT +
Preference number: 5 (lower is better)
Translates to: GGSNCPQAPGFSGQGVRETTIFS*SRSSMT
Trigger: AGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGT...CTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CAA 90 bp TGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGATGGAGCGCACCACCATCTTCTCCTaGAGCCGGTCATCGATGACT +
Preference number: 5 (lower is better)
Translates to: CSKLPSGWHLGTSSAMERTTIFS*SRSSMT
Trigger: AGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGT...GCGCTCCATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS TCA 90 bp CAGCCATGCTTCCTCCCAACACCTCTCCATGCCAAGGAAGGTGGATaGTCTTACGGGCCCCATGGGGAGCTCCCTTGTAATGGCCACCCT +
Preference number: 5 (lower is better)
Translates to: QPCFLPTPLHAKEGG*SYGPHGELPCNGHP
Trigger: AGGGTGGCCATTACAAGGGAGCTCCCCATGGGGCCCGTAAGATCATCCACCTTCCTTGGCATGGAGAGGTGTTGGGAGGAAGCATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 90 bp AGGGCATGCCTTCTTCCCCTCCTCGGAGGCAGCCTGAACACTCACTaGTCACCTGACAGGCATGGACCATCAGCACTGTCACTGGACTGT +
Preference number: 5 (lower is better)
Translates to: RACLLPLLGGSLNTH*SPDRHGPSALSLDC
Trigger: ACAGTCCAGTGACAGTGCTGATGGTCCATGCCTGTCAGGTGAGCAGTGAGTGTTCAGGCTGCCTCCGAGGAGGGGAAGAAGGCATGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 90 bp GCTGGCCTGTGCCCTATTAGCGGAGTGGGTGAGAGCACTCACTTTTaGAAACAAGCTGAGCCAGGTGTGATCCCTGGCGCTGCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: AGLCPISGVGESTHF*KQAEPGVIPGAASD
Trigger: GTCACTGGCAGCGCCAGGGATCACACCTGGCTCAGCTTGTTTGCAAAAGTGAGTGCTCTCACCCACTCCGCTAATAGGGCACAGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 90 bp GTACAATGGCAGGCACATGGGCTGCCGGCGGGAACAAGCACTCCCTaGCCAGGCAAATTGGATCTGCTGGGCATGAGGAAAGAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: VQWQAHGLPAGTSTP*PGKLDLLGMRKEEV
Trigger: GACCTCTTCTTTCCTCATGCCCAGCAGATCCAATTTGCCTGGGCAGGGAGTGCTTGTTCCCGCCGGCAGCCCATGTGCCTGCCATTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp GGACAGTACCAAGGACAGTGGCTGAGAAGATACCCAGGCACATGGTaGCGGAGGCTGGCTTGGAAGACTACATGCCTCTCTGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: GQYQGQWLRRYPGTW*RRLAWKTTCLSVPW
Trigger: CCAGGGGACAGAGAGGCATGTAGTCTTCCAAGCCAGCCTCCGCCACCATGTGCCTGGGTATCTTCTCAGCCACTGTCCTTGGTACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp TGGGGACAGTACCAAGGACAGTGGCTGAGAAGATACCCAGGCACATaGTGGCGGAGGCTGGCTTGGAAGACTACATGCCTCTCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: WGQYQGQWLRRYPGT*WRRLAWKTTCLSVP
Trigger: GGGGACAGAGAGGCATGTAGTCTTCCAAGCCAGCCTCCGCCACCATGTGCCTGGGTATCTTCTCAGCCACTGTCCTTGGTACTGTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp CTGATACAGGACACAGAAGCTCCCTGGGGACAGTACCAAGGACAGTaGCTGAGAAGATACCCAGGCACATGGTGGCGGAGGCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LIQDTEAPWGQYQGQ*LRRYPGTWWRRLAW
Trigger: CCAAGCCAGCCTCCGCCACCATGTGCCTGGGTATCTTCTCAGCCACTGTCCTTGGTACTGTCCCCAGGGAGCTTCTGTGTCCTGTATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp AATCTCCCATCTGTGGTCACCGGGCTGGGACATCGCCTGACAGGCTaGCAGTCCTGGCACAAGGCCCACAGCATTGGGTCTGTGTTTATG +
Preference number: 5 (lower is better)
Translates to: NLPSVVTGLGHRLTG*QSWHKAHSIGSVFM
Trigger: CATAAACACAGACCCAATGCTGTGGGCCTTGTGCCAGGACTGCCAGCCTGTCAGGCGATGTCCCAGCCCGGTGACCACAGATGGGAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS-3UTR CAA 90 bp TCACAGACCACATACACACACACGCACACACACTTGAGAGCCTTGGGCCAGGACCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: SQTTYTHTHTHLRALGQDPSGWH*GTSSAM
Trigger: CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG...GTCCTGGCCCAAGGCTCTCAAGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS-3UTR CAA 90 bp GCTAGGACAGCGTACTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACATTGGCACGGTCCTCTTaGGACAGCTCTGTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: ARTAYYTPDRQVSHRLVTLARSS*DSSVPK
Trigger: TTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAA...TGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAGTACGCTGTCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CAA 90 bp AGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACTTGTTGGCACGGTCCTCTTaGGACAGCTCTGTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: RMGHMASAVVPPSRVQNLLARSS*DSSVPK
Trigger: TTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAA...CAAGTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CAA 90 bp GTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCACGGTCCTCCAGCGTCTaGTCTCCAGGGTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: VSHRLVTDHIHTHAHTRARSSSV*SPGLLP
Trigger: AGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCG...TGCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CAA 90 bp ACATCAGCGGCTGTAACCACAGGGCTGAGGGGGCCTCCTTGCTCTGGAGGGGGTTTCAGGAAGGCCAACTaGTTCAGCTTTACCTCGTGC +
Preference number: 5 (lower is better)
Translates to: TSAAVTTGLRGPPCSGGGFRKAN*FSFTSC
Trigger: GCACGAGGTAAAGCTGAACAAGTTGGCCTTCCTGAA...ACCCCCTCCAGAGCAAGGAGGCCCCCTCAGCCCTGTGGTTACAGCCGCTGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS TCA 90 bp GCATGTTCCCTGGCCCTTCAGGTGTCCCAGCCTCTGACTCCTGCCTaGGAATGGAGCCCTTTGGCTGCAGCACTTCTTGAGCAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: ACSLALQVSQPLTPA*EWSPLAAALLEQVD
Trigger: ATCCACTTGCTCAAGAAGTGCTGCAGCCAAAGGGCTCCATTCTCAGGCAGGAGTCAGAGGCTGGGACACCTGAAGGGCCAGGGAACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561658.5
CDS TCA 90 bp ACCACCTCCACACGCTGTCCTGGCCACGGCCTCCCCAGATGTCTTTaGGGCTCAGGAGACCATGCTAGCCTGGGTTGTTTAGAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TTSTRCPGHGLPRCL*GSGDHASLGCLEKK
Trigger: CTTCTTCTCTAAACAACCCAGGCTAGCATGGTCTCCTGAGCCTCAAAGACATCTGGGGAGGCCGTGGCCAGGACAGCGTGTGGAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 90 bp GCGGCAGCTGCCAGACCAAACCTGTCTGCTTATTCACACAGCCACTaGAGCCAGCCAAGAGCCCTTCTCAGGCCAGGAGACTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: AAAARPNLSAYSHSH*SQPRALLRPGDFFL
Trigger: AAGGAAGAAGTCTCCTGGCCTGAGAAGGGCTCTTGGCTGGCTGCAGTGGCTGTGTGAATAAGCAGACAGGTTTGGTCTGGCAGCTGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp AATGGCCACCCTCCACTCAGACCTCCCTGGTCCCATCTGCTGGCATaGGCTCAGAGACCCTGGCTCCACAGGCTAGAGACTATTCTTCTA +
Preference number: 5 (lower is better)
Translates to: NGHPPLRPPWSHLLA*AQRPWLHRLETILL
Trigger: TAGAAGAATAGTCTCTAGCCTGTGGAGCCAGGGTCTCTGAGCCCATGCCAGCAGATGGGACCAGGGAGGTCTGAGTGGAGGGTGGCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS-3UTR CAA 90 bp ACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: TRAHTHTHTQRVQLRALGPSGWH*GTSSAM
Trigger: CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG...GCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000426604.7
CDS-3UTR CAA 90 bp GTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAGGGTGTTGCCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: VGCRTCRRTPGRPCRGCCPSGWH*GTSSAM
Trigger: CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG...GCAACACCCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CAA 90 bp GCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGTCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ASICSKLPSGWHLGTSSASVPKE*MVMMKA
Trigger: CGCCTTCATCATCACCATCAATTCTTTCGGCACAGA...CGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CAA 90 bp GGGCACGAGCTCAGCGATGGAGCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATTCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: GHELSDGALVQRACDEQDSVPKE*MVMMKA
Trigger: CGCCTTCATCATCACCATCAATTCTTTCGGCACAGA...ATCCTGCTCATCACAGGCACGCTGCACCAGCGCTCCATCGCTGAGCTCGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CAA 90 bp GGCCTAAGAACAGTCTCTAAGAGGGTCAGGAGAACTGGGCAGCCGCTAGGACAGGTCTTGTCTCCAGGGTaGCTACCTGCACCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: GLRTVSKRVRRTGQPLGQVLSPG*LPAPSK
Trigger: CTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGAC...CTGTCCTAGCGGCTGCCCAGTTCTCCTGACCCTCTTAGAGACTGTTCTTAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CAA 90 bp CCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACGAGAGGGCAGTTTTATaGTCTCAGAGGGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PQAPGFSGQGVREEHESDERAVL*SQRGRA
Trigger: AGCCCTGCCCCTCTGAGACAATAAAACTGCCCTCTC...GTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAACCCTGGGGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CAA 90 bp GATGGTGATGATGAAGGCGCGGCGGTCTGCTTCAAACTCCAGGATGGGGCACATTCCCTCTGGCATCCCTaGTGGCACCATCCATTCCCT +
Preference number: 5 (lower is better)
Translates to: DGDDEGAAVCFKLQDGAHSLWHP*WHHPFP
Trigger: AGGGAATGGATGGTGCCACAAGGGATGCCAGAGGGA...ATGTGCCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563064.5
CDS-3UTR CAA 90 bp GCCTCCATCTGCTCGAAGCTGCCTAGTGGGTGGCACTTGGGCACGAGCTCAGCGTTCAAGTCTCAGCCCTaGACTGGTCTAACAGTGCTA +
Preference number: 5 (lower is better)
Translates to: ASICSKLPSGWHLGTSSAFKSQP*TGLTVL
Trigger: TAGCACTGTTAGACCAGTCAAGGGCTGAGACTTGAA...CGCTGAGCTCGTGCCCAAGTGCCACCCACTAGGCAGCTTCGAGCAGATGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568101.5
CDS GCA 90 bp TCAGGTCTAAACCACCAGGTTGGCCTCCCTCTGACAAGCAGACCCTaGAGACTCACCTCGTGCTCAAAGAATCGGTCCTCCAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: SGLNHQVGLPLTSRP*RLTSCSKNRSSSVL
Trigger: CAAGACGCTGGAGGACCGATTCTTTGAGCACGAGGTGAGTCTGCAGGGTCTGCTTGTCAGAGGGAGGCCAACCTGGTGGTTTAGACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS GCA 90 bp TGGAATACAGTTCTCTGGGTCAGACCCAGGCACTGGTGCGGCAGCTaGCAGACCAAACCTGTCTGCTTATTCACACAGCCACTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: WNTVLWVRPRHWCGS*QTKPVCLFTQPLQP
Trigger: TGGCTGCAGTGGCTGTGTGAATAAGCAGACAGGTTTGGTCTGGCAGCTGCCGCACCAGTGCCTGGGTCTGACCCAGAGAACTGTATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 90 bp CCAACCAACCAGGTATTGGGCTCCATGCCCTGCTACCCACCCAATTaGTTAGCCAATCTGTACCAATCCCAGGAGAGGCTGATCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PTNQVLGSMPCYPPN*LANLYQSQERLIPG
Trigger: CCCTGGGATCAGCCTCTCCTGGGATTGGTACAGATTGGCTAAGCAATTGGGTGGGTAGCAGGGCATGGAGCCCAATACCTGGTTGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp GGGAGCCAAGACTGGAATACAGTTCTCTGGGTCAGACCCAGGCACTaGTGCGGCAGCTGCCAGACCAAACCTGTCTGCTTATTCACACAG +
Preference number: 5 (lower is better)
Translates to: GSQDWNTVLWVRPRH*CGSCQTKPVCLFTQ
Trigger: CTGTGTGAATAAGCAGACAGGTTTGGTCTGGCAGCTGCCGCACCAGTGCCTGGGTCTGACCCAGAGAACTGTATTCCAGTCTTGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp CTCAGACCTCCCTGGTCCCATCTGCTGGCATGGGCTCAGAGACCCTaGCTCCACAGGCTAGAGACTATTCTTCTAGATTGTAGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: LRPPWSHLLAWAQRP*LHRLETILLDCRQG
Trigger: CCCTTGCCTACAATCTAGAAGAATAGTCTCTAGCCTGTGGAGCCAGGGTCTCTGAGCCCATGCCAGCAGATGGGACCAGGGAGGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS-3UTR CAA 90 bp GTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: VGLVEGVADDLDVHLVKVPSGWH*GTSSAM
Trigger: CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG...GACCTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CAA 90 bp CGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCTGGCCTAGTGGGTGGCACTaGGGCACGAGCTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: RMISMFISSRSCSEMQSWPSGWH*GTSSAM
Trigger: CATCGCTGAGCTCGTGCCCAAGTGCCACCCACTAGG...CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CAA 90 bp GGAGAGGAGGCTCAAACTGCCCCCAGGCCCCAGGGTTCTCAGGTCAGGGAGTTATCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: GEEAQTAPRPQGSQVRELSVPKE*MVMMKA
Trigger: CGCCTTCATCATCACCATCAATTCTTTCGGCACAGA...TAACTCCCTGACCTGAGAACCCTGGGGCCTGGGGGCAGTTTGAGCCTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CAA 90 bp AGAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCTTGGCACGGTCCTCTTaGGACAGCTCTGTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: RAQQVSEQCSRPPSARSCLARSS*DSSVPK
Trigger: TTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAA...GCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CAA 90 bp CAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCTGCCTAGTGGGTTTGGCACGGTCCTCTTaGGACAGCTCTGTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: QVSEQCSRPPSARSCLVGLARSS*DSSVPK
Trigger: TTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAA...ACCCACTAGGCAGCTTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CAA 90 bp TGGTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGGTCATCGCAGTGTGGAAAGAGCTaGGCACGGTCCTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: WFLMWRNSTTIFSLSRSSQCGKS*ARSSLD
Trigger: GTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTG...CGATGACCGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CAA 90 bp GTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGGTCATCGATTCCCTCTGGCATCCCTaGTGGCACCATCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: VPHVAELHHHLLLEPVIDSLWHP*WHHPFL
Trigger: GAGGAATGGATGGTGCCACAAGGGATGCCAGAGGGA...ATCGATGACCGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS TCA 90 bp TCCTCAGCCCTTGACTGGTCTAACAGTGCTACTTGCTGGCCAGAGTaGCCTTCCTGTGATCTCTGCTCCAGCAAGTGCTCCAGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SSALDWSNSATCWPE*PSCDLCSSKCSREV
Trigger: GACTTCCCTGGAGCACTTGCTGGAGCAGAGATCACAGGAAGGTCACTCTGGCCAGCAAGTAGCACTGTTAGACCAGTCAAGGGCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS TCA 90 bp GTCTCAGCCCTTGACTGGTCTAACAGTGCTACTTGCTGGCCAGAGTaGCCTTCCTGTGATCTCTGCTCCAGCAAGTGCTCCAGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: VSALDWSNSATCWPE*PSCDLCSSKCSREV
Trigger: GACTTCCCTGGAGCACTTGCTGGAGCAGAGATCACAGGAAGGTCACTCTGGCCAGCAAGTAGCACTGTTAGACCAGTCAAGGGCTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568101.5
CDS GCA 90 bp ATGGGCTGTACGGTGTACTCATCCCCATGCCAGGAGCAACCTGTGTaGTGGACCTCTCAACCATGCCCATCTCAGCCTCAGGAACAGAAA +
Preference number: 5 (lower is better)
Translates to: MGCTVYSSPCQEQPV*WTSQPCPSQPQEQK
Trigger: TTTCTGTTCCTGAGGCTGAGATGGGCATGGTTGAGAGGTCCAGCACACAGGTTGCTCCTGGCATGGGGATGAGTACACCGTACAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp ATCAGCACTGTCACTGGACTGTCATCACTCAGGGACAAGTCCCTCTaGCATCCCTTGTGGCACCATCCATTCCCTCTAGCGTCTCGCACT +
Preference number: 5 (lower is better)
Translates to: ISTVTGLSSLRDKSL*HPLWHHPFPLASRT
Trigger: AGTGCGAGACGCTAGAGGGAATGGATGGTGCCACAAGGGATGCCAGAGGGACTTGTCCCTGAGTGATGACAGTCCAGTGACAGTGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563064.5
ENST00000568298.1
CDS CCA 90 bp ACACTCACTGCTCACCTGACAGGCATGGACCATCAGCACTGTCACTaGACTGTCATCACTCAGGGACAAGTCCCTCTGGCATCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: TLTAHLTGMDHQHCH*TVITQGQVPLASLV
Trigger: CACAAGGGATGCCAGAGGGACTTGTCCCTGAGTGATGACAGTCCAGTGACAGTGCTGATGGTCCATGCCTGTCAGGTGAGCAGTGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp GGCTGTACGGTGTACTCATCCCCATGCCAGGAGCAACCTGTGTGCTaGACCTCTCAACCATGCCCATCTCAGCCTCAGGAACAGAAATCA +
Preference number: 5 (lower is better)
Translates to: GCTVYSSPCQEQPVC*TSQPCPSQPQEQKS
Trigger: TGATTTCTGTTCCTGAGGCTGAGATGGGCATGGTTGAGAGGTCCAGCACACAGGTTGCTCCTGGCATGGGGATGAGTACACCGTACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS-3UTR CAA 90 bp AGGATGGGGCACATGGCATCAGCCGTAGTCCCGCCCAGTAGGGTGCAGAACTTGTCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: RMGHMASAVVPPSRVQNLSVPKE*MVMMKA
Trigger: CGCCTTCATCATCACCATCAATTCTTTCGGCACAGA...CAAGTTCTGCACCCTACTGGGCGGGACTACGGCTGATGCCATGTGCCCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
CDS-3UTR CAA 90 bp AGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACATTGGCACGGTCCTCTTaGGACAGCTCTGTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: RQVSHRLVTDHIHTHAHTLARSS*DSSVPK
Trigger: TTTCGGCACAGAGCTGTCCAAAGAGGACCGTGCCAA...TGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
ENST00000602876.5
CDS TCA 90 bp CAACCATGCCCATCTCAGCCTCAGGAACAGAAATCAGACAGAACATaGAACCTGTCCAGAGTCCCAGAGTTGGGGCATAGAGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: QPCPSQPQEQKSDRT*NLSRVPELGHRGAG
Trigger: CCCAGCCCCTCTATGCCCCAACTCTGGGACTCTGGACAGGTTTCATGTTCTGTCTGATTTCTGTTCCTGAGGCTGAGATGGGCATGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS TCA 90 bp TCTCCTACATCCTTACCCCAGGCCGTCTGCAATGAACCCTTGCCCTaGGATCTCTTCTCCCACATCCTCACCACATCTAACCAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: SPTSLPQAVCNEPLP*DLFSHILTTSNQAP
Trigger: TGGGGCTTGGTTAGATGTGGTGAGGATGTGGGAGAAGAGATCTCAGGGCAAGGGTTCATTGCAGACGGCCTGGGGTAAGGATGTAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS TCA 90 bp GGGAAATGTGCACTCTCCTACATCCTTACCCCAGGCCGTCTGCAATaGACCCTTGCCCTGAGATCTCTTCTCCCACATCCTCACCACATC +
Preference number: 5 (lower is better)
Translates to: GKCALSYILTPGRLQ*TLALRSLLPHPHHI
Trigger: GATGTGGTGAGGATGTGGGAGAAGAGATCTCAGGGCAAGGGTTCATTGCAGACGGCCTGGGGTAAGGATGTAGGAGAGTGCACATTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp AAAGTGGAACTGGTTCAGGAAGGCCAACTTGTTCAGCTTTACCTGTaGACACGGGCAGATGTGGTGTCCAGGTGGCCATGGCCACAGAGT +
Preference number: 5 (lower is better)
Translates to: KVELVQEGQLVQLYL*TRADVVSRWPWPQS
Trigger: ACTCTGTGGCCATGGCCACCTGGACACCACATCTGCCCGTGTCCACAGGTAAAGCTGAACAAGTTGGCCTTCCTGAACCAGTTCCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS CCA 90 bp TCCCCTCATCCCAACATGAAGCGGGCAACCCAGATCTACTCTAACTaGAAACACATGGGCTGTACGGTGTACTCATCCCCATGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SPHPNMKRATQIYSN*KHMGCTVYSSPCQE
Trigger: CTCCTGGCATGGGGATGAGTACACCGTACAGCCCATGTGTTTCCAGTTAGAGTAGATCTGGGTTGCCCGCTTCATGTTGGGATGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS-3UTR CAA 90 bp TCCCGCCCAGTAGGGTGCAGAACTTGTAGAAGGACTCCAGGTAGGCCTTGTAGAACCACCATCTTCTCCTaGAGCCGGTCATCGATGACT +
Preference number: 5 (lower is better)
Translates to: SRPVGCRTCRRTPGRPCRTTIFS*SRSSMT
Trigger: AGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGT...TCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTACTGGGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000564788.1
ENST00000566322.6
CDS-3UTR CAA 90 bp CTACACCCCGGACAGGCAGGTGAGCCACAGGCTTGTCACAGACCACATACACACTCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: LHPGQAGEPQACHRPHTHSVPKE*MVMMKA
Trigger: CGCCTTCATCATCACCATCAATTCTTTCGGCACAGA...GTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCACCTGCCTGTCCGGGGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000565835.5
ENST00000602876.5
CDS-3UTR CAA 90 bp GCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCCAGGACCAGTGTGGAAAGAGCTaGGCACGGTCCTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: AHTHTHTQRVQLRALGQDQCGKS*ARSSLD
Trigger: GTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTG...GTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CAA 90 bp TCCTCTTTGGACAGCTCTGTGCCGAAAGAATTGATGGTGATGATGAAGGCGCGGGTCTTGTCTCCAGGGTaGCTACCTGCACCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SSLDSSVPKELMVMMKARVLSPG*LPAPSK
Trigger: CTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGAC...CCGCGCCTTCATCATCACCATCAATTCTTTCGGCACAGAGCTGTCCAAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000561852.5
CDS-3UTR CAA 90 bp GCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCACACATTCAGGAAGGCCAACTaGTTCAGCTTTACCTCGTGC +
Preference number: 5 (lower is better)
Translates to: ATGLSQTTYTHTHTHAHTFRKAN*FSFTSC
Trigger: GCACGAGGTAAAGCTGAACAAGTTGGCCTTCCTGAA...TGTGTGCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CAA 90 bp GTGAGCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCATTCAGGAAGGCCAACTaGTTCAGCTTTACCTCGTGC +
Preference number: 5 (lower is better)
Translates to: VSHRLVTDHIHTHAHTRAFRKAN*FSFTSC
Trigger: GCACGAGGTAAAGCTGAACAAGTTGGCCTTCCTGAA...TGCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CAA 90 bp CTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCGCGATCCACACGATGTaGCGACACTCCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LVEGVADDLDVHLVKVLLAIHTM*RHSCSL
Trigger: CAAGGAGCAGGAGTGTCGCAACATCGTGTGGATCGC...GAGCAGGACCTTGACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR CAA 90 bp ACACGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGGCGATCCACACGATGTaGCGACACTCCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TRTHTRTHTHTHTKSAIEAIHTM*RHSCSL
Trigger: CAAGGAGCAGGAGTGTCGCAACATCGTGTGGATCGC...CTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CAA 90 bp GCACACACACACACACACACACAAAGAGTGCAATTGAGAGCCTTGGGCCAGGACGTGCAATTGAGAGCCTaGGGCCAGGACGCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: AHTHTHTQRVQLRALGQDVQLRA*GQDARR
Trigger: TCTTCTAGCGTCCTGGCCCAAGGCTCTCAATTGCAC...GTCCTGGCCCAAGGCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS TCA 90 bp CTCAGCATCACAGAGCAGGAACAAAATTGTCAGGCCAGTTCCTGCTaGGGGATGGTTATTGCCTACACGGACGTCAGCTGGGCACAGTAC +
Preference number: 5 (lower is better)
Translates to: LSITEQEQNCQASSC*GMVIAYTDVSWAQY
Trigger: GTACTGTGCCCAGCTGACGTCCGTGTAGGCAATAACCATCCCTCAGCAGGAACTGGCCTGACAATTTTGTTCCTGCTCTGTGATGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS TCA 90 bp CCACAGGCTTGTCACAGACCACATACACACACACGCACACACACTTaGGAGCCTTGGGCCAGGACGCTAGAAGATAGGGATGTAGTTGTC +
Preference number: 5 (lower is better)
Translates to: PQACHRPHTHTRTHT*EPWARTLEDRDVVV
Trigger: GACAACTACATCCCTATCTTCTAGCGTCCTGGCCCAAGGCTCTCAAGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS GCA 90 bp TACTCTAACTGGAAACACATGGGCTGTACGGTGTACTCATCCCCATaGCAGGAGCAACCTGTGTGCTGGACCTCTCAACCATGCCCATCT +
Preference number: 5 (lower is better)
Translates to: YSNWKHMGCTVYSSP*QEQPVCWTSQPCPS
Trigger: AGATGGGCATGGTTGAGAGGTCCAGCACACAGGTTGCTCCTGGCATGGGGATGAGTACACCGTACAGCCCATGTGTTTCCAGTTAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 90 bp CTATTTGTGGGGGAACCAACCAACCAGGTATTGGGCTCCATGCCCTaGTACCCACCCAATTGCTTAGCCAATCTGTACCAATCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LFVGEPTNQVLGSMP*YPPNCLANLYQSQE
Trigger: CTCCTGGGATTGGTACAGATTGGCTAAGCAATTGGGTGGGTAGCAGGGCATGGAGCCCAATACCTGGTTGGTTGGTTCCCCCACAAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 90 bp GCAGGAACAAAATTGTCAGGCCAGTTCCTGCTGAGGGATGGTTATTaGCTACACGGACGTCAGCTGGGCACAGTACAATGGCAGGCACAT +
Preference number: 5 (lower is better)
Translates to: AGTKLSGQFLLRDGY*LHGRQLGTVQWQAH
Trigger: ATGTGCCTGCCATTGTACTGTGCCCAGCTGACGTCCGTGTAGGCAATAACCATCCCTCAGCAGGAACTGGCCTGACAATTTTGTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp GATGCAGTTTCAAGTCTGACAGGCATGGACCATCAGCACTGTCACTaGACTGTCATCACTCAGGGACAAGTCCCTCTGGCATCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: DAVSSLTGMDHQHCH*TVITQGQVPLASLV
Trigger: CACAAGGGATGCCAGAGGGACTTGTCCCTGAGTGATGACAGTCCAGTGACAGTGCTGATGGTCCATGCCTGTCAGACTTGAAACTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR CAA 90 bp GCCACAGGCTTGTCACAGACCACATACACACACACGCACACACACGCGCACACATCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ATGLSQTTYTHTHTHAHTSVPKE*MVMMKA
Trigger: CGCCTTCATCATCACCATCAATTCTTTCGGCACAGA...TGTGTGCGCGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACAAGCCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CAA 90 bp ACACGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGCAGTGTGGAAAGAGCTaGGCACGGTCCTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: TRTHTRTHTHTHTKSAIEQCGKS*ARSSLD
Trigger: GTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTG...CTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CAA 90 bp CAGCTTGTACTCCGGGTAGTAATCGGCCACGTTCTTGACCTGTTCATAGTCGTCCAGTGTGGAAAGAGCTaGGCACGGTCCTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: QLVLRVVIGHVLDLFIVVQCGKS*ARSSLD
Trigger: GTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTG...GACGACTATGAACAGGTCAAGAACGTGGCCGATTACTACCCGGAGTACAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
CDS-3UTR CAA 90 bp ATTGTAGAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAACAGTGTGGAAAGAGCTaGGCACGGTCCTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: IVELSRCLSNVHGLHLLEQCGKS*ARSSLD
Trigger: GTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTG...TTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTCTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426604.7
ENST00000561852.5
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CAA 90 bp ACACACACGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATGTGCAATTGAGAGCCTaGGGCCAGGACGCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: THTHTHAHTHTHTHKECNVQLRA*GQDARR
Trigger: TCTTCTAGCGTCCTGGCCCAAGGCTCTCAATTGCAC...ATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS-3UTR CAA 90 bp GCGCTGGTGCAGCGTGCCTGTGATGAGCAGGATCACGTTGTCGATCATGTAACTTCCATTCCTCAGCCCTaGACTGGTCTAACAGTGCTA +
Preference number: 5 (lower is better)
Translates to: ALVQRACDEQDHVVDHVTSIPQP*TGLTVL
Trigger: TAGCACTGTTAGACCAGTCAAGGGCTGAGGAATGGA...AGTTACATGATCGACAACGTGATCCTGCTCATCACAGGCACGCTGCACCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS TCA 90 bp GAGGCCTGCAGGAGACACCTGCTGCCTTCACCATTACTCTGCAATTaGCCACTACTTTTCTCCCATGGCCACCCAAAAGGGCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: EACRRHLLPSPLLCN*PLLFSHGHPKGHRR
Trigger: TCTTCTATGCCCTTTTGGGTGGCCATGGGAGAAAAGTAGTGGTCAATTGCAGAGTAATGGTGAAGGCAGCAGGTGTCTCCTGCAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS TCA 90 bp GAGTGGGTGAGAGCACTCACTTTTGCAAACAAGCTGAGCCAGGTGTaGTCCCTGGCGCTGCCAGTGACTTATTATGTGGCTTTAGGCAAC +
Preference number: 5 (lower is better)
Translates to: EWVRALTFANKLSQV*SLALPVTYYVALGN
Trigger: GTTGCCTAAAGCCACATAATAAGTCACTGGCAGCGCCAGGGATCACACCTGGCTCAGCTTGTTTGCAAAAGTGAGTGCTCTCACCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp AATGCTGGGCAAGCCCAACTCAGGGGAAGGCCTGAGAGTGACCTCTaGGATCACGGGAAACAAAAATCTAGGACAGGTCAGGAAGTAAGA +
Preference number: 5 (lower is better)
Translates to: NAGQAQLRGRPESDL*DHGKQKSRTGQEVR
Trigger: TCTTACTTCCTGACCTGTCCTAGATTTTTGTTTCCCGTGATCCCAGAGGTCACTCTCAGGCCTTCCCCTGAGTTGGGCTTGCCCAGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 90 bp TCACAGAGCAGGAACAAAATTGTCAGGCCAGTTCCTGCTGAGGGATaGTTATTGCCTACACGGACGTCAGCTGGGCACAGTACAATGGCA +
Preference number: 5 (lower is better)
Translates to: SQSRNKIVRPVPAEG*LLPTRTSAGHSTMA
Trigger: TGCCATTGTACTGTGCCCAGCTGACGTCCGTGTAGGCAATAACCATCCCTCAGCAGGAACTGGCCTGACAATTTTGTTCCTGCTCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS-3UTR CAA 90 bp CTTGTACTCCGGGTAGTAATCGGCCACGTTCTTGACCTGTTCATAGTCGTCAGCACCACCATCTTCTCCTaGAGCCGGTCATCGATGACT +
Preference number: 5 (lower is better)
Translates to: LVLRVVIGHVLDLFIVVSTTIFS*SRSSMT
Trigger: AGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGT...GCTGACGACTATGAACAGGTCAAGAACGTGGCCGATTACTACCCGGAGTACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS-3UTR CAA 90 bp CGGATGATCTCGATGTTCATCTCGTCAAGGTCCTGCTCTGAAATGCAGTCCTGGACCACCATCTTCTCCTaGAGCCGGTCATCGATGACT +
Preference number: 5 (lower is better)
Translates to: RMISMFISSRSCSEMQSWTTIFS*SRSSMT
Trigger: AGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGT...CCAGGACTGCATTTCAGAGCAGGACCTTGACGAGATGAACATCGAGATCATCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000564191.5
ENST00000566322.6
ENST00000568101.5
CDS-3UTR CAA 90 bp ATAGGCATGGTTCCTCATGTGGCGGAACTCCACCACCATCTTCTCCTTGAGCCGTCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: IGMVPHVAELHHHLLLEPSVPKE*MVMMKA
Trigger: CGCCTTCATCATCACCATCAATTCTTTCGGCACAGA...CGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAACCATGCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000563064.5
ENST00000566322.6
CDS-3UTR CAA 90 bp AAGTGGAACTGGTTCAGGAAGGCCAACTTGTTCAGCTTTACCTCGTGCTCAAAGGTCTTGTCTCCAGGGTaGCTACCTGCACCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: KWNWFRKANLFSFTSCSKVLSPG*LPAPSK
Trigger: CTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGAC...CTTTGAGCACGAGGTAAAGCTGAACAAGTTGGCCTTCCTGAACCAGTTCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS-3UTR CAA 90 bp CGCACACACACGCGCACACACACACACACACACACAAAGAGTGCAATTGAGAGCTTCAGGAAGGCCAACTaGTTCAGCTTTACCTCGTGC +
Preference number: 5 (lower is better)
Translates to: RTHTRTHTHTHTKSAIESFRKAN*FSFTSC
Trigger: GCACGAGGTAAAGCTGAACAAGTTGGCCTTCCTGAA...GCTCTCAATTGCACTCTTTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290949.8
ENST00000426604.7
ENST00000565835.5
CDS TCA 90 bp GTAGGCAAGGGTTGGATGGCATGGAAAGCTTTTCATACCGAGGTCTaGACTCCAAGGTGTGGAGACCTTTCCACCAACCATCAGCCAACT +
Preference number: 5 (lower is better)
Translates to: VGKGWMAWKAFHTEV*TPRCGDLSTNHQPT
Trigger: AGTTGGCTGATGGTTGGTGGAAAGGTCTCCACACCTTGGAGTTCAGACCTCGGTATGAAAAGCTTTCCATGCCATCCAACCCTTGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 90 bp CATGGAGTGAACTTCAACCTCCTGAGGCCTGCAGGAGACACCTGCTaGCTTCACCATTACTCTGCAATTGACCACTACTTTTCTCCCATG +
Preference number: 5 (lower is better)
Translates to: HGVNFNLLRPAGDTC*LHHYSAIDHYFSPM
Trigger: CATGGGAGAAAAGTAGTGGTCAATTGCAGAGTAATGGTGAAGGCAGCAGGTGTCTCCTGCAGGCCTCAGGAGGTTGAAGTTCACTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 90 bp ACTCATGGAGTGAACTTCAACCTCCTGAGGCCTGCAGGAGACACCTaGTGCCTTCACCATTACTCTGCAATTGACCACTACTTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: THGVNFNLLRPAGDT*CLHHYSAIDHYFSP
Trigger: GGGAGAAAAGTAGTGGTCAATTGCAGAGTAATGGTGAAGGCAGCAGGTGTCTCCTGCAGGCCTCAGGAGGTTGAAGTTCACTCCATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 90 bp GATGGCATGGAAAGCTTTTCATACCGAGGTCTGAACTCCAAGGTGTaGAGACCTTTCCACCAACCATCAGCCAACTTGGGCTCACAAGCT +
Preference number: 5 (lower is better)
Translates to: DGMESFSYRGLNSKV*RPFHQPSANLGSQA
Trigger: AGCTTGTGAGCCCAAGTTGGCTGATGGTTGGTGGAAAGGTCTCCACACCTTGGAGTTCAGACCTCGGTATGAAAAGCTTTCCATGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS-3UTR CAA 90 bp ATTGTAGAGCTCAGCAGGTGTCTGAGCAATGTTCACGGCCTCCATCTGCTCGAAGCATTACCTCAGCCCTaGACTGGTCTAACAGTGCTA +
Preference number: 5 (lower is better)
Translates to: IVELSRCLSNVHGLHLLEALPQP*TGLTVL
Trigger: TAGCACTGTTAGACCAGTCAAGGGCTGAGGTAATGC...TTCGAGCAGATGGAGGCCGTGAACATTGCTCAGACACCTGCTGAGCTCTACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566322.6
CDS CCA 90 bp AACCTGGAGTCAGGCGAGCTAAAGGAGAGATGGAACACAGCATGTTaGAATACAGCAGGTCTCTGGAATAGATGCCTTCCACCTGCATCT +
Preference number: 5 (lower is better)
Translates to: NLESGELKERWNTAC*NTAGLWNRCLPPAS
Trigger: AGATGCAGGTGGAAGGCATCTATTCCAGAGACCTGCTGTATTCCAACATGCTGTGTTCCATCTCTCCTTTAGCTCGCCTGACTCCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS-3UTR CAA 90 bp GGGAGGAACATGAAAGTGACATGCTTCTTAGATACATCAGCGGCTGTAACCACAGAGAGGGCAGTTTTATaGTCTCAGAGGGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GRNMKVTCFLDTSAAVTTERAVL*SQRGRA
Trigger: AGCCCTGCCCCTCTGAGACAATAAAACTGCCCTCTC...TGTGGTTACAGCCGCTGATGTATCTAAGAAGCATGTCACTTTCATGTTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS-3UTR CAA 90 bp CTCCAGGTAGGCCTTGTAGAGGGTGTTGCGGATGATCTCGATGTTCATCTCGTCATGAAGTCCTCCAAATaGAATGGTTCGCTGTCACCT +
Preference number: 5 (lower is better)
Translates to: LQVGLVEGVADDLDVHLVMKSSK*NGSLSP
Trigger: AGGTGACAGCGAACCATTCAATTTGGAGGACTTCAT...GACGAGATGAACATCGAGATCATCCGCAACACCCTCTACAAGGCCTACCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566322.6
CDS-3UTR CAA 90 bp TTCTCAGGTCAGGGAGTTAGGGAGGAACATGAAAGTGACATGCTTCTTAGATACACACACTTGAGAGCCTaGGGCCAGGACGCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: FSGQGVREEHESDMLLRYTHLRA*GQDARR
Trigger: TCTTCTAGCGTCCTGGCCCAAGGCTCTCAAGTGTGT...GTATCTAAGAAGCATGTCACTTTCATGTTCCTCCCTAACTCCCTGACCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS-3UTR CAA 90 bp GGGAGGAACATGAAAGTGACATGCTTCTTAGATACATCAGCGGCTGTAACCACATCTGTGCCGAAAGAATaGATGGTGATGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: GRNMKVTCFLDTSAAVTTSVPKE*MVMMKA
Trigger: CGCCTTCATCATCACCATCAATTCTTTCGGCACAGA...TGTGGTTACAGCCGCTGATGTATCTAAGAAGCATGTCACTTTCATGTTCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290949.8
ENST00000602876.5
CDS TCA 90 bp ACCACATCTAACCAAGCCCCAGCTACTCCTAGAGTAAGGCATGGGTaGGAAAAGATGCTTTGCTCAGTAAACTTGGGTGGTTGCATTATT +
Preference number: 5 (lower is better)
Translates to: TTSNQAPATPRVRHG*EKMLCSVNLGGCII
Trigger: AATAATGCAACCACCCAAGTTTACTGAGCAAAGCATCTTTTCTCACCCATGCCTTACTCTAGGAGTAGCTGGGGCTTGGTTAGATGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp CCAAGTGGCAGCTGCCCACAGCCTCCCACCCAGGAGTaGCAGGGCAGGGCCCACCCGACTGTCTGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: PSGSCPQPPTQE*QGRAHPTVCFR
Trigger: CCTGAAGCAGACAGTCGGGTGGGCCCTGCCCTGGCACTCCTGGGTGGGAGGCTGTGGGCAGCTGCCACTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563305.1
ENST00000568620.5
CDS CAA 72 bp GGGAGGCTGCCCAGGGGATCAAAGGCGGAGCTGCACTaGGGACCACCTCCACACGCTGTCCTGGCCACGGCC +
Preference number: 6 (lower is better)
Translates to: GRLPRGSKAELH*GPPPHAVLATA
Trigger: GGCCGTGGCCAGGACAGCGTGTGGAGGTGGTCCCAAGTGCAGCTCCGCCTTTGATCCCCTGGGCAGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp CCCTGGGGAGGCTGCCCAGGGGATCAAAGGCGGAGCTaGACTTGGGACCACCTCCACACGCTGTCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: PWGGCPGDQRRS*TWDHLHTLSWP
Trigger: TGGCCAGGACAGCGTGTGGAGGTGGTCCCAAGTGCAGCTCCGCCTTTGATCCCCTGGGCAGCCTCCCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp CCCCGCCCTGTCCCCTGGAGTCTGCCAATCCACGGCTaGTGCACCAGCTGCCTACTGTTCCCACCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: PRPVPWSLPIHG*CTSCLLFPPAG
Trigger: CCCAGCAGGTGGGAACAGTAGGCAGCTGGTGCAGCAGCCGTGGATTGGCAGACTCCAGGGGACAGGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp GGAGGCTGCCCAGGGGATCAAAGGCGGAGCTGCACTTaGGACCACCTCCACACGCTGTCCTGGCCACGGCCT +
Preference number: 6 (lower is better)
Translates to: GGCPGDQRRSCT*DHLHTLSWPRP
Trigger: AGGCCGTGGCCAGGACAGCGTGTGGAGGTGGTCCCAAGTGCAGCTCCGCCTTTGATCCCCTGGGCAGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp CGGACGTCAGCTGGGCACAGTACAATGGCAGGCACATaGGCTGCCGGCGGGAACAAGCACTCCCTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: RTSAGHSTMAGT*AAGGNKHSLPR
Trigger: CCTGGGCAGGGAGTGCTTGTTCCCGCCGGCAGCCCATGTGCCTGCCATTGTACTGTGCCCAGCTGACGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp CGGCACAGAGTGCCCGTGCCACAAGGCCCACAGGGCTaGGTATTGAGGGGTCCCCAGCCTAGGCTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: RHRVPVPQGPQG*VLRGPQPRLLP
Trigger: AGGCAACAGCCTAGGCTGGGGACCCCTCAATACCCAGCCCTGTGGGCCTTGTGGCACGGGCACTCTGTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567170.5
CDS GCA 72 bp CACCCAGCAGTCCATGTAGCCCTGAAGCTGGAGTTCTaGCTCTCCCCCACAGCCTGTGAGGCCCCGTGCCCT +
Preference number: 6 (lower is better)
Translates to: HPAVHVALKLEF*LSPTACEAPCP
Trigger: AGGGCACGGGGCCTCACAGGCTGTGGGGGAGAGGCAGAACTCCAGCTTCAGGGCTACATGGACTGCTGGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566322.6
CDS CCA 72 bp GAGGCCTGTGGCCAGGAGAGGGCCTGCTTCCTAGCTTaGGCATGTTCCCTGGCCCTTCAGGTGTCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: EACGQERACFLA*ACSLALQVSQP
Trigger: AGGCTGGGACACCTGAAGGGCCAGGGAACATGCCCAAGCTAGGAAGCAGGCCCTCTCCTGGCCACAGGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540149.5
ENST00000561658.5
CDS CAA 90 bp CACGGCTGCTGCACCAGCTGCCTACTGTTCCCACCTGCTGGGTGGTaGAGGGTCCGCCTAATCTCCCATCTGTGGTCACCGGGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: HGCCTSCLLFPPAGW*RVRLISHLWSPGWD
Trigger: GTCCCAGCCCGGTGACCACAGATGGGAGATTAGGCGGACCCTCAACCACCCAGCAGGTGGGAACAGTAGGCAGCTGGTGCAGCAGCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS TCA 72 bp CCTGGCACAAGGCCCACAGCATTGGGTCTGTGTTTATaGGCTAGTGCCTGGGCAGCCCTCGCCGGCGACTCC +
Preference number: 6 (lower is better)
Translates to: PGTRPTALGLCL*ASAWAALAGDS
Trigger: GGAGTCGCCGGCGAGGGCTGCCCAGGCACTAGCTCATAAACACAGACCCAATGCTGTGGGCCTTGTGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS TCA 72 bp GAGTGCCCGTGCCACAAGGCCCACAGGGCTGGGTATTaGGGGGTCCCCAGCCTAGGCTGTTGCCTTGGAAGT +
Preference number: 6 (lower is better)
Translates to: ECPCHKAHRAGY*GVPSLGCCLGS
Trigger: ACTTCCAAGGCAACAGCCTAGGCTGGGGACCCCTCAATACCCAGCCCTGTGGGCCTTGTGGCACGGGCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567170.5
CDS GCA 72 bp CCCTGGAGTCTGCCAATCCACGGCTGCTGCACCAGCTaGCTACTGTTCCCACCTGCTGGGTGGTTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: PWSLPIHGCCTS*LLFPPAGWLRV
Trigger: GACCCTCAACCACCCAGCAGGTGGGAACAGTAGGCAGCTGGTGCAGCAGCCGTGGATTGGCAGACTCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp GGCCTCCTGATCCCTCCCCTCCAAAGCATCAGGGGCTaGGCCTCACCCGGGCATCTGTGTACACACTGCTCT +
Preference number: 6 (lower is better)
Translates to: GLLIPPLQSIRG*ASPGHLCTHCS
Trigger: AGAGCAGTGTGTACACAGATGCCCGGGTGAGGCCCAGCCCCTGATGCTTTGGAGGGGAGGGATCAGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp GGCACTCCTGCCAGTGACTCCACTATTCCCTGGGACTaGGAGTCTGGACCCCGGTCTGGCCTCCTGATCCCT +
Preference number: 6 (lower is better)
Translates to: GTPASDSTIPWD*ESGPRSGLLIP
Trigger: AGGGATCAGGAGGCCAGACCGGGGTCCAGACTCCCAGTCCCAGGGAATAGTGGAGTCACTGGCAGGAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp TCTGTGGTCACCGGGCTGGGACATCGCCTGACAGGCTaGCAGTCCTGGCACAAGGCCCACAGCATTGGGTCT +
Preference number: 6 (lower is better)
Translates to: SVVTGLGHRLTG*QSWHKAHSIGS
Trigger: AGACCCAATGCTGTGGGCCTTGTGCCAGGACTGCCAGCCTGTCAGGCGATGTCCCAGCCCGGTGACCACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 72 bp AGAGTGCCCGTGCCACAAGGCCCACAGGGCTGGGTATaGAGGGGTCCCCAGCCTAGGCTGTTGCCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: RVPVPQGPQGWV*RGPQPRLLPWK
Trigger: CTTCCAAGGCAACAGCCTAGGCTGGGGACCCCTCAATACCCAGCCCTGTGGGCCTTGTGGCACGGGCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567170.5
CDS CAA 90 bp CTCAGGAAAGGAGGCCTGTGGCCAGGAGAGGGCCTGCTTCCTAGCTaGGGCATGTTCCCTGGCCCTTCAGGTGTCCCAGCCTCTGACTCC +
Preference number: 6 (lower is better)
Translates to: LRKGGLWPGEGLLPS*GMFPGPSGVPASDS
Trigger: GGAGTCAGAGGCTGGGACACCTGAAGGGCCAGGGAACATGCCCAAGCTAGGAAGCAGGCCCTCTCCTGGCCACAGGCCTCCTTTCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540149.5
ENST00000561658.5
CDS CAA 90 bp ACACGGCACAGAGTGCCCGTGCCACAAGGCCCACAGGGCTGGGTATaGAGGGGTCCCCAGCCTAGGCTGTTGCCTTGGAAGTGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: TRHRVPVPQGPQGWV*RGPQPRLLPWKWQK
Trigger: CTTCTGCCACTTCCAAGGCAACAGCCTAGGCTGGGGACCCCTCAATACCCAGCCCTGTGGGCCTTGTGGCACGGGCACTCTGTGCCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567170.5
CDS CAA 90 bp ACAGTGGCTGAGAAGATACCCAGGCACATGGTGGCGGAGGCTGGCTaGGAAGACTACATGCCTCTCTGTCCCCTGGGGAGGCTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: TVAEKIPRHMVAEAG*EDYMPLCPLGRLPR
Trigger: CCTGGGCAGCCTCCCCAGGGGACAGAGAGGCATGTAGTCTTCCAAGCCAGCCTCCGCCACCATGTGCCTGGGTATCTTCTCAGCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS TCA 72 bp CCGGGGCACTCACCGGGTAGTAATCGGCCACGTTCTTaGCCTGTTCATAGTCGTCAGCCCGAGCCAGCTGCG +
Preference number: 6 (lower is better)
Translates to: PGHSPGSNRPRS*PVHSRQPEPAA
Trigger: CGCAGCTGGCTCGGGCTGACGACTATGAACAGGTCAAGAACGTGGCCGATTACTACCCGGTGAGTGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS GCA 72 bp CACGTTAAAGTAAAGCTCCGGGAAGAACGACATGGCTaGTGCGGGAGCGGCGGGACCGGAGAACCAGGACCG +
Preference number: 6 (lower is better)
Translates to: HVKVKLREERHG*CGSGGTGEPGP
Trigger: CGGTCCTGGTTCTCCGGTCCCGCCGCTCCCGCAGCAGCCATGTCGTTCTTCCCGGAGCTTTACTTTAACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290949.8
ENST00000561658.5
ENST00000561852.5
ENST00000563064.5
ENST00000564788.1
ENST00000568298.1
CDS GCA 72 bp CTCTCAGGAAAGGAGGCCTGTGGCCAGGAGAGGGCCTaGTTCCTAGCTTGGGCATGTTCCCTGGCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: LSGKEACGQERA*FLAWACSLALQ
Trigger: CTGAAGGGCCAGGGAACATGCCCAAGCTAGGAAGCAGGCCCTCTCCTGGCCACAGGCCTCCTTTCCTGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540149.5
ENST00000561658.5
CDS GCA 72 bp CCACGGCTGCTGCACCAGCTGCCTACTGTTCCCACCTaGTGGGTGGTTGAGGGTCCGCCTAATCTCCCATCT +
Preference number: 6 (lower is better)
Translates to: PRLLHQLPTVPT*WVVEGPPNLPS
Trigger: AGATGGGAGATTAGGCGGACCCTCAACCACCCAGCAGGTGGGAACAGTAGGCAGCTGGTGCAGCAGCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp GGCCTGGGTGGCAGAGACAGCTGCCAACCCCTCCCATaGCTTGGTGGTACCTTTCACAGTCCCTCTAGGGGT +
Preference number: 6 (lower is better)
Translates to: GLGGRDSCQPLP*LGGTFHSPSRG
Trigger: ACCCCTAGAGGGACTGTGAAAGGTACCACCAAGCCATGGGAGGGGTTGGCAGCTGTCTCTGCCACCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp CCTCCACTCAGACCTCCCTGGTCCCATCTGCTGGCATaGGCTCAGAGACCCTGGCTCCACAGGCTAGAGACT +
Preference number: 6 (lower is better)
Translates to: PPLRPPWSHLLA*AQRPWLHRLET
Trigger: AGTCTCTAGCCTGTGGAGCCAGGGTCTCTGAGCCCATGCCAGCAGATGGGACCAGGGAGGTCTGAGTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 72 bp CAGGCACATGGGCTGCCGGCGGGAACAAGCACTCCCTaGCCAGGCAAATTGGATCTGCTGGGCATGAGGAAA +
Preference number: 6 (lower is better)
Translates to: QAHGLPAGTSTP*PGKLDLLGMRK
Trigger: TTTCCTCATGCCCAGCAGATCCAATTTGCCTGGGCAGGGAGTGCTTGTTCCCGCCGGCAGCCCATGTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp CCTCAGGGTAGAGCCGCCCACAGTGTGGAAAGAGCTTaGCACGGTCCTCTTTGGACAGCTCTCCAGGATGGG +
Preference number: 6 (lower is better)
Translates to: PQGRAAHSVERA*HGPLWTALQDG
Trigger: CCCATCCTGGAGAGCTGTCCAAAGAGGACCGTGCCAAGCTCTTTCCACACTGTGGGCGGCTCTACCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564615.5
CDS CCA 72 bp GTACACACTGCTCTTCCAGGCCCTGGCACAAGCTGCTaGGAGGCTTCCCCGAGTGAGCTGTCACCTCCTACT +
Preference number: 6 (lower is better)
Translates to: VHTALPGPGTSC*EASPSELSPPT
Trigger: AGTAGGAGGTGACAGCTCACTCGGGGAAGCCTCCCAGCAGCTTGTGCCAGGGCCTGGAAGAGCAGTGTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp AGAAGATACCCAGGCACATGGTGGCGGAGGCTGGCTTaGAAGACTACATGCCTCTCTGTCCCCTGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: RRYPGTWWRRLA*KTTCLSVPWGG
Trigger: GCCTCCCCAGGGGACAGAGAGGCATGTAGTCTTCCAAGCCAGCCTCCGCCACCATGTGCCTGGGTATCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp ACCGGGCTGGGACATCGCCTGACAGGCTGGCAGTCCTaGCACAAGGCCCACAGCATTGGGTCTGTGTTTATG +
Preference number: 6 (lower is better)
Translates to: TGLGHRLTGWQS*HKAHSIGSVFM
Trigger: CATAAACACAGACCCAATGCTGTGGGCCTTGTGCCAGGACTGCCAGCCTGTCAGGCGATGTCCCAGCCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 72 bp GGGAAGCACAAGCATGAGGGTTCTGGGTGGGGGTGCTaGGTGACAACACATCCAACCGCTGTCCTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: GKHKHEGSGWGC*VTTHPTAVLPA
Trigger: GGCTGGCAGGACAGCGGTTGGATGTGTTGTCACCAAGCACCCCCACCCAGAACCCTCATGCTTGTGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS CAA 72 bp GAGAAGATACCCAGGCACATGGTGGCGGAGGCTGGCTaGGAAGACTACATGCCTCTCTGTCCCCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: EKIPRHMVAEAG*EDYMPLCPLGR
Trigger: CCTCCCCAGGGGACAGAGAGGCATGTAGTCTTCCAAGCCAGCCTCCGCCACCATGTGCCTGGGTATCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CAA 72 bp TGCACCAGCTGCCTACTGTTCCCACCTGCTGGGTGGTaGAGGGTCCGCCTAATCTCCCATCTGTGGTCACCG +
Preference number: 6 (lower is better)
Translates to: CTSCLLFPPAGW*RVRLISHLWSP
Trigger: CGGTGACCACAGATGGGAGATTAGGCGGACCCTCAACCACCCAGCAGGTGGGAACAGTAGGCAGCTGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 72 bp CAGGGCTGGGTATTGAGGGGTCCCCAGCCTAGGCTGTaGCCTTGGAAGTGGCAGAAGCAATGCTCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: QGWVLRGPQPRL*PWKWQKQCSGP
Trigger: TGGCCCAGAGCATTGCTTCTGCCACTTCCAAGGCAACAGCCTAGGCTGGGGACCCCTCAATACCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567170.5
CDS CAA 90 bp CAAGGCCCACAGGGCTGGGTATTGAGGGGTCCCCAGCCTAGGCTGTaGCCTTGGAAGTGGCAGAAGCAATGCTCTGGGCCATGTACACTG +
Preference number: 6 (lower is better)
Translates to: QGPQGWVLRGPQPRL*PWKWQKQCSGPCTL
Trigger: CAGTGTACATGGCCCAGAGCATTGCTTCTGCCACTTCCAAGGCAACAGCCTAGGCTGGGGACCCCTCAATACCCAGCCCTGTGGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567170.5
CDS GCA 72 bp AGGGCAGGCAACCCGGCAACAGGCCAGCTAGGCGCGTaGGTACACACACACACACAAACACACACGTGTGTA +
Preference number: 6 (lower is better)
Translates to: RAGNPATGQLGA*VHTHTQTHTCV
Trigger: TACACACGTGTGTGTTTGTGTGTGTGTGTGTACGCACGCGCCTAGCTGGCCTGTTGCCGGGTTGCCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp GACACAGAAGCTCCCTGGGGACAGTACCAAGGACAGTaGCTGAGAAGATACCCAGGCACATGGTGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: DTEAPWGQYQGQ*LRRYPGTWWRR
Trigger: CCTCCGCCACCATGTGCCTGGGTATCTTCTCAGCCACTGTCCTTGGTACTGTCCCCAGGGAGCTTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp TATTGCCTACACGGACGTCAGCTGGGCACAGTACAATaGCAGGCACATGGGCTGCCGGCGGGAACAAGCACT +
Preference number: 6 (lower is better)
Translates to: YCLHGRQLGTVQ*QAHGLPAGTST
Trigger: AGTGCTTGTTCCCGCCGGCAGCCCATGTGCCTGCCATTGTACTGTGCCCAGCTGACGTCCGTGTAGGCAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 72 bp GGCCCCGTGCCCTCAGCCCTAGCATTACCTCAGCCCTaGACTGGTCTAACAGTGCTACTTGCTGGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: GPVPSALALPQP*TGLTVLLAGQS
Trigger: ACTCTGGCCAGCAAGTAGCACTGTTAGACCAGTCAAGGGCTGAGGTAATGCTAGGGCTGAGGGCACGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566322.6
CDS CAA 90 bp ACCTCGTGCTCAAAGAATCGGTCCTCCAGCGTCTTGTCTCCAGGGTaGCTACCTGCACCCTCGAAGAGCAGCTTGTACTCCTGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: TSCSKNRSSSVLSPG*LPAPSKSSLYSWPG
Trigger: CCCTGGCCAGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCGATTCTTTGAGCACGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS CAA 90 bp CCCTGCAGACTCACCTCGTGCTCAAAGAATCGGTCCTCCAGCGTCTaGTCTCCAGGGTTGCTACCTGCACCCTCGAAGAGCAGCTTGTAC +
Preference number: 6 (lower is better)
Translates to: PCRLTSCSKNRSSSV*SPGLLPAPSKSSLY
Trigger: GTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCGATTCTTTGAGCACGAGGTGAGTCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS CAA 90 bp CCGGGCCAGATGTACAGGGTGAGCTCCAGAGAAAAACTCAGTCCTTaGGGTGGTGGCACTCCTGCCAGTGACTCCACTATTCCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: PGQMYRVSSREKLSP*GGGTPASDSTIPWD
Trigger: GTCCCAGGGAATAGTGGAGTCACTGGCAGGAGTGCCACCACCCAAAGGACTGAGTTTTTCTCTGGAGCTCACCCTGTACATCTGGCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS TCA 72 bp ACACGCTGTCCTGGCCACGGCCTCCCCAGATGTCTTTaGGGCTCAGGAGACCATGCTAGCCTGGGTTGTTTA +
Preference number: 6 (lower is better)
Translates to: TRCPGHGLPRCL*GSGDHASLGCL
Trigger: TAAACAACCCAGGCTAGCATGGTCTCCTGAGCCTCAAAGACATCTGGGGAGGCCGTGGCCAGGACAGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp AACCACCAGGTTGGCCTCCCTCTGACAAGCAGACCCTaGAGACTCACCTCGTGCTCAAAGAATCGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: NHQVGLPLTSRP*RLTSCSKNRSS
Trigger: GGAGGACCGATTCTTTGAGCACGAGGTGAGTCTGCAGGGTCTGCTTGTCAGAGGGAGGCCAACCTGGTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS GCA 72 bp CTTCTTCCCCTCCTCGGAGGCAGCCTGAACACTCACTaGTCACCTGACAGGCATGGACCATCAGCACTGTCA +
Preference number: 6 (lower is better)
Translates to: LLPLLGGSLNTH*SPDRHGPSALS
Trigger: TGACAGTGCTGATGGTCCATGCCTGTCAGGTGAGCAGTGAGTGTTCAGGCTGCCTCCGAGGAGGGGAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp ACGGTGTACTCATCCCCATGCCAGGAGCAACCTGTGTaGTGGACCTCTCAACCATGCCCATCTCAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: TVYSSPCQEQPV*WTSQPCPSQPQ
Trigger: CTGAGGCTGAGATGGGCATGGTTGAGAGGTCCAGCACACAGGTTGCTCCTGGCATGGGGATGAGTACACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp GTTCTCTGGGTCAGACCCAGGCACTGGTGCGGCAGCTaGCAGACCAAACCTGTCTGCTTATTCACACAGCCA +
Preference number: 6 (lower is better)
Translates to: VLWVRPRHWCGS*QTKPVCLFTQP
Trigger: TGGCTGTGTGAATAAGCAGACAGGTTTGGTCTGGCAGCTGCCGCACCAGTGCCTGGGTCTGACCCAGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp ATGCTTCCTCCCAACACCTCTCCATGCCAAGGAAGGTaGATGATCTTACGGGCCCCATGGGGAGCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: MLPPNTSPCQGR*MILRAPWGAPL
Trigger: CAAGGGAGCTCCCCATGGGGCCCGTAAGATCATCCACCTTCCTTGGCATGGAGAGGTGTTGGGAGGAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp TTGAGGGGTCCCCAGCCTAGGCTGTTGCCTTGGAAGTaGCAGAAGCAATGCTCTGGGCCATGTACACTGACC +
Preference number: 6 (lower is better)
Translates to: LRGPQPRLLPWK*QKQCSGPCTLT
Trigger: GGTCAGTGTACATGGCCCAGAGCATTGCTTCTGCCACTTCCAAGGCAACAGCCTAGGCTGGGGACCCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567170.5
CDS CAA 72 bp CTCACCTCGTGCTCAAAGAATCGGTCCTCCAGCGTCTaGTCTCCAGGGTTGCTACCTGCACCCTCGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LTSCSKNRSSSV*SPGLLPAPSKS
Trigger: GCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCGATTCTTTGAGCACGAGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS CAA 90 bp GGGGCCCTGCACTTCCTATTTGTGGGGGAACCAACCAACCAGGTATaGGGCTCCATGCCCTGCTACCCACCCAATTGCTTAGCCAATCTG +
Preference number: 6 (lower is better)
Translates to: GALHFLFVGEPTNQV*GSMPCYPPNCLANL
Trigger: CAGATTGGCTAAGCAATTGGGTGGGTAGCAGGGCATGGAGCCCAATACCTGGTTGGTTGGTTCCCCCACAAATAGGAAGTGCAGGGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS TCA 72 bp AAAACTCAGTCCTTTGGGTGGTGGCACTCCTGCCAGTaGCTCCACTATTCCCTGGGACTGGGAGTCTGGACC +
Preference number: 6 (lower is better)
Translates to: KTQSFGWWHSCQ*LHYSLGLGVWT
Trigger: GGTCCAGACTCCCAGTCCCAGGGAATAGTGGAGTCACTGGCAGGAGTGCCACCACCCAAAGGACTGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp GGGCACTCATGGAGTGAACTTCAACCTCCTGAGGCCTaGAGGAGACACCTGCTGCCTTCACCATTACTCTGC +
Preference number: 6 (lower is better)
Translates to: GHSWSELQPPEA*RRHLLPSPLLC
Trigger: GCAGAGTAATGGTGAAGGCAGCAGGTGTCTCCTGCAGGCCTCAGGAGGTTGAAGTTCACTCCATGAGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp GTCACTGGACTGTCATCACTCAGGGACAAGTCCCTCTaGCATCCCTTGTGGCACCATCCATTCCTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: VTGLSSLRDKSL*HPLWHHPFLSP
Trigger: AGGGCTGAGGAATGGATGGTGCCACAAGGGATGCCAGAGGGACTTGTCCCTGAGTGATGACAGTCCAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426604.7
CDS CCA 72 bp TCATCACTCAGGGACAAGTCCCTCTGGCATCCCTTGTaGCACCATCCATTCCCTCTAGCGTCTCGCACTGCA +
Preference number: 6 (lower is better)
Translates to: SSLRDKSLWHPL*HHPFPLASRTA
Trigger: TGCAGTGCGAGACGCTAGAGGGAATGGATGGTGCCACAAGGGATGCCAGAGGGACTTGTCCCTGAGTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563064.5
ENST00000568298.1
CDS CCA 72 bp GTCACTGGACTGTCATCACTCAGGGACAAGTCCCTCTaGCATCCCTTGTGGCACCATCCATTCCCTCTAGCG +
Preference number: 6 (lower is better)
Translates to: VTGLSSLRDKSL*HPLWHHPFPLA
Trigger: CGCTAGAGGGAATGGATGGTGCCACAAGGGATGCCAGAGGGACTTGTCCCTGAGTGATGACAGTCCAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563064.5
ENST00000568298.1
CDS CCA 72 bp AGCCCCTTTCAAGGTGGGTACAAGCACACCCATGGATaGGCCGGGGCAGCCCTTACAGCAAAGCCAATGAAA +
Preference number: 6 (lower is better)
Translates to: SPFQGGYKHTHG*AGAALTAKPMK
Trigger: TTTCATTGGCTTTGCTGTAAGGGCTGCCCCGGCCCATCCATGGGTGTGCTTGTACCCACCTTGAAAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563305.1
ENST00000568620.5
CDS CCA 72 bp CTGGTTCAGGAAGGCCAACTTGTTCAGCTTTACCTGTaGACACGGGCAGATGTGGTGTCCAGGTGGCCATGG +
Preference number: 6 (lower is better)
Translates to: LVQEGQLVQLYL*TRADVVSRWPW
Trigger: CCATGGCCACCTGGACACCACATCTGCCCGTGTCCACAGGTAAAGCTGAACAAGTTGGCCTTCCTGAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS CCA 72 bp GTGTACTCATCCCCATGCCAGGAGCAACCTGTGTGCTaGACCTCTCAACCATGCCCATCTCAGCCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: VYSSPCQEQPVC*TSQPCPSQPQE
Trigger: TTCCTGAGGCTGAGATGGGCATGGTTGAGAGGTCCAGCACACAGGTTGCTCCTGGCATGGGGATGAGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp CAAGGACAGTGGCTGAGAAGATACCCAGGCACATGGTaGCGGAGGCTGGCTTGGAAGACTACATGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: QGQWLRRYPGTW*RRLAWKTTCLS
Trigger: AGAGAGGCATGTAGTCTTCCAAGCCAGCCTCCGCCACCATGTGCCTGGGTATCTTCTCAGCCACTGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp AGGTGTGGAGACCTTTCCACCAACCATCAGCCAACTTaGGCTCACAAGCTCTGCTGGGTGGTGCTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: RCGDLSTNHQPT*AHKLCWVVLQE
Trigger: CTCTTGGAGCACCACCCAGCAGAGCTTGTGAGCCCAAGTTGGCTGATGGTTGGTGGAAAGGTCTCCACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 72 bp CTGTCATCACTCAGGGACAAGTCCCTCTGGCATCCCTaGTGGCACCATCCATTCCCTCTAGCGTCTCGCACT +
Preference number: 6 (lower is better)
Translates to: LSSLRDKSLWHP*WHHPFPLASRT
Trigger: AGTGCGAGACGCTAGAGGGAATGGATGGTGCCACAAGGGATGCCAGAGGGACTTGTCCCTGAGTGATGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563064.5
ENST00000568298.1
CDS CAA 90 bp GAGCTCTCAAGCAGCATGAAACTTCCTCTGCTCCAGCCTCCCACTTaGCTCCACATGGCTTCTCTCCCTAGCTCAGCAACTTCCCCACTG +
Preference number: 6 (lower is better)
Translates to: ELSSSMKLPLLQPPT*LHMASLPSSATSPL
Trigger: CAGTGGGGAAGTTGCTGAGCTAGGGAGAGAAGCCATGTGGAGCAAAGTGGGAGGCTGGAGCAGAGGAAGTTTCATGCTGCTTGAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CAA 90 bp ACCAACCAACCAGGTATTGGGCTCCATGCCCTGCTACCCACCCAATaGCTTAGCCAATCTGTACCAATCCCAGGAGAGGCTGATCCCAGG +
Preference number: 6 (lower is better)
Translates to: TNQPGIGLHALLPTQ*LSQSVPIPGEADPR
Trigger: CCTGGGATCAGCCTCTCCTGGGATTGGTACAGATTGGCTAAGCAATTGGGTGGGTAGCAGGGCATGGAGCCCAATACCTGGTTGGTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS TCA 72 bp GGCAGCCCTTACAGCAAAGCCAATGAAACACTTCTGTaGATCAGCCAAGTGGCAGCTGCCCACAGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: GSPYSKANETLL*ISQVAAAHSLP
Trigger: TGGGAGGCTGTGGGCAGCTGCCACTTGGCTGATTCACAGAAGTGTTTCATTGGCTTTGCTGTAAGGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563305.1
ENST00000568620.5
CDS TCA 72 bp ATGGATGGGCCGGGGCAGCCCTTACAGCAAAGCCAATaGAACACTTCTGTGAATCAGCCAAGTGGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: MDGPGQPLQQSQ*NTSVNQPSGSC
Trigger: GCAGCTGCCACTTGGCTGATTCACAGAAGTGTTTCATTGGCTTTGCTGTAAGGGCTGCCCCGGCCCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563305.1
ENST00000568620.5
CDS TCA 72 bp GCACTCTCCTACATCCTTACCCCAGGCCGTCTGCAATaGACCCTTGCCCTGAGATCTCTTCTCCCACATCCT +
Preference number: 6 (lower is better)
Translates to: ALSYILTPGRLQ*TLALRSLLPHP
Trigger: AGGATGTGGGAGAAGAGATCTCAGGGCAAGGGTTCATTGCAGACGGCCTGGGGTAAGGATGTAGGAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS TCA 72 bp TTCCTCCCAACACCTCTCCATGCCAAGGAAGGTGGATaGTCTTACGGGCCCCATGGGGAGCTCCCTTGTAAT +
Preference number: 6 (lower is better)
Translates to: FLPTPLHAKEGG*SYGPHGELPCN
Trigger: ATTACAAGGGAGCTCCCCATGGGGCCCGTAAGATCATCCACCTTCCTTGGCATGGAGAGGTGTTGGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 72 bp CAAAGAATCGGTCCTCCAGCGTCTTGTCTCCAGGGTTaGTACCTGCACCCTCGAAGAGCAGCTTGTACTCCT +
Preference number: 6 (lower is better)
Translates to: QRIGPPASCLQG*YLHPRRAACTP
Trigger: AGGAGTACAAGCTGCTCTTCGAGGGTGCAGGTAGCAACCCTGGAGACAAGACGCTGGAGGACCGATTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS GCA 72 bp TGGAAACACATGGGCTGTACGGTGTACTCATCCCCATaGCAGGAGCAACCTGTGTGCTGGACCTCTCAACCA +
Preference number: 6 (lower is better)
Translates to: WKHMGCTVYSSP*QEQPVCWTSQP
Trigger: TGGTTGAGAGGTCCAGCACACAGGTTGCTCCTGGCATGGGGATGAGTACACCGTACAGCCCATGTGTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp TGCCCTATTAGCGGAGTGGGTGAGAGCACTCACTTTTaGAAACAAGCTGAGCCAGGTGTGATCCCTGGCGCT +
Preference number: 6 (lower is better)
Translates to: CPISGVGESTHF*KQAEPGVIPGA
Trigger: AGCGCCAGGGATCACACCTGGCTCAGCTTGTTTGCAAAAGTGAGTGCTCTCACCCACTCCGCTAATAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 72 bp CAGGTATTGGGCTCCATGCCCTGCTACCCACCCAATTaGTTAGCCAATCTGTACCAATCCCAGGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: QVLGSMPCYPPN*LANLYQSQERL
Trigger: CAGCCTCTCCTGGGATTGGTACAGATTGGCTAAGCAATTGGGTGGGTAGCAGGGCATGGAGCCCAATACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 72 bp ATCAGCCAACTTGGGCTCACAAGCTCTGCTGGGTGGTaGTCCAAGAGAGATGAGATGAGACCCAGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: ISQLGLTSSAGW*SKRDEMRPRSL
Trigger: CAGACTCCTGGGTCTCATCTCATCTCTCTTGGAGCACCACCCAGCAGAGCTTGTGAGCCCAAGTTGGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 72 bp ACAAAAGCAGCCATGCTTCCTCCCAACACCTCTCCATaGCAAGGAAGGTGGATGATCTTACGGGCCCCATGG +
Preference number: 6 (lower is better)
Translates to: TKAAMLPPNTSP*QGRWMILRAPW
Trigger: CCATGGGGCCCGTAAGATCATCCACCTTCCTTGGCATGGAGAGGTGTTGGGAGGAAGCATGGCTGCTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp AGCGGGCAACCCAGATCTACTCTAACTGGAAACACATaGGCTGTACGGTGTACTCATCCCCATGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: SGQPRSTLTGNT*AVRCTHPHARS
Trigger: GCTCCTGGCATGGGGATGAGTACACCGTACAGCCCATGTGTTTCCAGTTAGAGTAGATCTGGGTTGCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp ACACACGTGTGTATGCTCTCTCTCCTCTCAGCTAACTaGCTGGCCTGTGCCCTATTAGCGGAGTGGGTGAGA +
Preference number: 6 (lower is better)
Translates to: THVCMLSLLSAN*LACALLAEWVR
Trigger: TCTCACCCACTCCGCTAATAGGGCACAGGCCAGCCAGTTAGCTGAGAGGAGAGAGAGCATACACACGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp ACCATCAGCCAACTTGGGCTCACAAGCTCTGCTGGGTaGTGCTCCAAGAGAGATGAGATGAGACCCAGGAGT +
Preference number: 6 (lower is better)
Translates to: TISQLGLTSSAG*CSKRDEMRPRS
Trigger: ACTCCTGGGTCTCATCTCATCTCTCTTGGAGCACCACCCAGCAGAGCTTGTGAGCCCAAGTTGGCTGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 72 bp CTGCCTGAGAATGGAGCCCTTTGGCTGCAGCACTTCTaGAGCAAGTGGATCCTGGGCAAGTGGCTCCTAAGT +
Preference number: 6 (lower is better)
Translates to: LPENGALWLQHF*SKWILGKWLLS
Trigger: ACTTAGGAGCCACTTGCCCAGGATCCACTTGCTCAAGAAGTGCTGCAGCCAAAGGGCTCCATTCTCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561658.5
CDS CAA 72 bp CCAGGTATTGGGCTCCATGCCCTGCTACCCACCCAATaGCTTAGCCAATCTGTACCAATCCCAGGAGAGGCT +
Preference number: 6 (lower is better)
Translates to: PGIGLHALLPTQ*LSQSVPIPGEA
Trigger: AGCCTCTCCTGGGATTGGTACAGATTGGCTAAGCAATTGGGTGGGTAGCAGGGCATGGAGCCCAATACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 90 bp CTGAACTCCAAGGTGTGGAGACCTTTCCACCAACCATCAGCCAACTaGGGCTCACAAGCTCTGCTGGGTGGTGCTCCAAGAGAGATGAGA +
Preference number: 6 (lower is better)
Translates to: LNSKVWRPFHQPSAN*GSQALLGGAPREMR
Trigger: TCTCATCTCTCTTGGAGCACCACCCAGCAGAGCTTGTGAGCCCAAGTTGGCTGATGGTTGGTGGAAAGGTCTCCACACCTTGGAGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS TCA 72 bp CTTGACTGGTCTAACAGTGCTACTTGCTGGCCAGAGTaGCCTTCCTGTGATCTCTGCTCCAGCAAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: LDWSNSATCWPE*PSCDLCSSKCS
Trigger: GGAGCACTTGCTGGAGCAGAGATCACAGGAAGGTCACTCTGGCCAGCAAGTAGCACTGTTAGACCAGTCAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426604.7
ENST00000566322.6
ENST00000568101.5
CDS TCA 72 bp CTCTGCACCTCCTTTACCGCTCTATTCCCCAGCCCTTaGCCCAGGACAGGCTTTTCAGATACAGACTCAGCT +
Preference number: 6 (lower is better)
Translates to: LCTSFTALFPSP*PRTGFSDTDSA
Trigger: AGCTGAGTCTGTATCTGAAAAGCCTGTCCTGGGTCAAGGGCTGGGGAATAGAGCGGTAAAGGAGGTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS TCA 72 bp CTCCTACTCAGGATCCTCATGAGCTCTCAAGCAGCATaGAACTTCCTCTGCTCCAGCCTCCCACTTTGCTCC +
Preference number: 6 (lower is better)
Translates to: LLLRILMSSQAA*NFLCSSLPLCS
Trigger: GGAGCAAAGTGGGAGGCTGGAGCAGAGGAAGTTTCATGCTGCTTGAGAGCTCATGAGGATCCTGAGTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS TCA 72 bp TCCTTACCCCAGGCCGTCTGCAATGAACCCTTGCCCTaGGATCTCTTCTCCCACATCCTCACCACATCTAAC +
Preference number: 6 (lower is better)
Translates to: SLPQAVCNEPLP*DLFSHILTTSN
Trigger: GTTAGATGTGGTGAGGATGTGGGAGAAGAGATCTCAGGGCAAGGGTTCATTGCAGACGGCCTGGGGTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp TGCCAGGAGCAACCTGTGTGCTGGACCTCTCAACCATaGCCATCTCAGCCTCAGGAACAGAAATCAGACAGA +
Preference number: 6 (lower is better)
Translates to: CQEQPVCWTSQP*PSQPQEQKSDR
Trigger: TCTGTCTGATTTCTGTTCCTGAGGCTGAGATGGGCATGGTTGAGAGGTCCAGCACACAGGTTGCTCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp GGGGAACCAACCAACCAGGTATTGGGCTCCATGCCCTaGTACCCACCCAATTGCTTAGCCAATCTGTACCAA +
Preference number: 6 (lower is better)
Translates to: GEPTNQVLGSMP*YPPNCLANLYQ
Trigger: TTGGTACAGATTGGCTAAGCAATTGGGTGGGTAGCAGGGCATGGAGCCCAATACCTGGTTGGTTGGTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp TCAAGTCTGACAGGCATGGACCATCAGCACTGTCACTaGACTGTCATCACTCAGGGACAAGTCCCTCTGGCA +
Preference number: 6 (lower is better)
Translates to: SSLTGMDHQHCH*TVITQGQVPLA
Trigger: TGCCAGAGGGACTTGTCCCTGAGTGATGACAGTCCAGTGACAGTGCTGATGGTCCATGCCTGTCAGACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426604.7
ENST00000563064.5
CDS CCA 72 bp CTTTACTCAGAAAGAGTCCCTTCCAGAGCCCTCATGTaGTGGTCCCACCATCCCCGCTTAACCTCTCTGACT +
Preference number: 6 (lower is better)
Translates to: LYSERVPSRALM*WSHHPRLTSLT
Trigger: AGTCAGAGAGGTTAAGCGGGGATGGTGGGACCACCACATGAGGGCTCTGGAAGGGACTCTTTCTGAGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp CAAGCCCAACTCAGGGGAAGGCCTGAGAGTGACCTCTaGGATCACGGGAAACAAAAATCTAGGACAGGTCAG +
Preference number: 6 (lower is better)
Translates to: QAQLRGRPESDL*DHGKQKSRTGQ
Trigger: CTGACCTGTCCTAGATTTTTGTTTCCCGTGATCCCAGAGGTCACTCTCAGGCCTTCCCCTGAGTTGGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 90 bp AGCAGGAACAAAATTGTCAGGCCAGTTCCTGCTGAGGGATGGTTATaGCCTACACGGACGTCAGCTGGGCACAGTACAATGGCAGGCACA +
Preference number: 6 (lower is better)
Translates to: SRNKIVRPVPAEGWL*PTRTSAGHSTMAGT
Trigger: TGTGCCTGCCATTGTACTGTGCCCAGCTGACGTCCGTGTAGGCAATAACCATCCCTCAGCAGGAACTGGCCTGACAATTTTGTTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS TCA 72 bp ACAGAGCAGGAACAAAATTGTCAGGCCAGTTCCTGCTaGGGGATGGTTATTGCCTACACGGACGTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: TEQEQNCQASSC*GMVIAYTDVSW
Trigger: CCAGCTGACGTCCGTGTAGGCAATAACCATCCCTCAGCAGGAACTGGCCTGACAATTTTGTTCCTGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS TCA 72 bp TGTCACAGACCACATACACACACACGCACACACACTTaGGAGCCTTGGGCCAGGACGCTAGAAGATAGGGAT +
Preference number: 6 (lower is better)
Translates to: CHRPHTHTRTHT*EPWARTLEDRD
Trigger: ATCCCTATCTTCTAGCGTCCTGGCCCAAGGCTCTCAAGTGTGTGTGCGTGTGTGTGTATGTGGTCTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602876.5
CDS GCA 72 bp GTGAACTTCAACCTCCTGAGGCCTGCAGGAGACACCTaGTGCCTTCACCATTACTCTGCAATTGACCACTAC +
Preference number: 6 (lower is better)
Translates to: VNFNLLRPAGDT*CLHHYSAIDHY
Trigger: GTAGTGGTCAATTGCAGAGTAATGGTGAAGGCAGCAGGTGTCTCCTGCAGGCCTCAGGAGGTTGAAGTTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS GCA 72 bp TGCGTACACACACACACACAAACACACACGTGTGTATaGTCTCTCTCCTCTCAGCTAACTGGCTGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: CVHTHTQTHTCV*SLSSQLTGWPV
Trigger: CACAGGCCAGCCAGTTAGCTGAGAGGAGAGAGAGCATACACACGTGTGTGTTTGTGTGTGTGTGTGTACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS GCA 72 bp AAATTGTCAGGCCAGTTCCTGCTGAGGGATGGTTATTaGCTACACGGACGTCAGCTGGGCACAGTACAATGG +
Preference number: 6 (lower is better)
Translates to: KLSGQFLLRDGY*LHGRQLGTVQW
Trigger: CCATTGTACTGTGCCCAGCTGACGTCCGTGTAGGCAATAACCATCCCTCAGCAGGAACTGGCCTGACAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp CCCAACATGAAGCGGGCAACCCAGATCTACTCTAACTaGAAACACATGGGCTGTACGGTGTACTCATCCCCA +
Preference number: 6 (lower is better)
Translates to: PNMKRATQIYSN*KHMGCTVYSSP
Trigger: TGGGGATGAGTACACCGTACAGCCCATGTGTTTCCAGTTAGAGTAGATCTGGGTTGCCCGCTTCATGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CCA 72 bp AGGAACAAAATTGTCAGGCCAGTTCCTGCTGAGGGATaGTTATTGCCTACACGGACGTCAGCTGGGCACAGT +
Preference number: 6 (lower is better)
Translates to: RNKIVRPVPAEG*LLPTRTSAGHS
Trigger: ACTGTGCCCAGCTGACGTCCGTGTAGGCAATAACCATCCCTCAGCAGGAACTGGCCTGACAATTTTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 72 bp CACTTCCTATTTGTGGGGGAACCAACCAACCAGGTATaGGGCTCCATGCCCTGCTACCCACCCAATTGCTTA +
Preference number: 6 (lower is better)
Translates to: HFLFVGEPTNQV*GSMPCYPPNCL
Trigger: TAAGCAATTGGGTGGGTAGCAGGGCATGGAGCCCAATACCTGGTTGGTTGGTTCCCCCACAAATAGGAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS TCA 72 bp AGGAGACACCTGCTGCCTTCACCATTACTCTGCAATTaGCCACTACTTTTCTCCCATGGCCACCCAAAAGGG +
Preference number: 6 (lower is better)
Translates to: RRHLLPSPLLCN*PLLFSHGHPKG
Trigger: CCCTTTTGGGTGGCCATGGGAGAAAAGTAGTGGTCAATTGCAGAGTAATGGTGAAGGCAGCAGGTGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS TCA 72 bp AGAGCACTCACTTTTGCAAACAAGCTGAGCCAGGTGTaGTCCCTGGCGCTGCCAGTGACTTATTATGTGGCT +
Preference number: 6 (lower is better)
Translates to: RALTFANKLSQV*SLALPVTYYVA
Trigger: AGCCACATAATAAGTCACTGGCAGCGCCAGGGATCACACCTGGCTCAGCTTGTTTGCAAAAGTGAGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CCA 72 bp AATGGAGCCCTTTGGCTGCAGCACTTCTTGAGCAAGTaGATCCTGGGCAAGTGGCTCCTAAGTAATGAAGTC +
Preference number: 6 (lower is better)
Translates to: NGALWLQHFLSK*ILGKWLLSNEV
Trigger: GACTTCATTACTTAGGAGCCACTTGCCCAGGATCCACTTGCTCAAGAAGTGCTGCAGCCAAAGGGCTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561658.5
CDS CCA 72 bp GAAAGCTTTTCATACCGAGGTCTGAACTCCAAGGTGTaGAGACCTTTCCACCAACCATCAGCCAACTTGGGC +
Preference number: 6 (lower is better)
Translates to: ESFSYRGLNSKV*RPFHQPSANLG
Trigger: GCCCAAGTTGGCTGATGGTTGGTGGAAAGGTCTCCACACCTTGGAGTTCAGACCTCGGTATGAAAAGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 72 bp AAGACACCAAAGTGGAACTGGTTCAGGAAGGCCAACTaGTTCAGCTTTACCTGTGGACACGGGCAGATGTGG +
Preference number: 6 (lower is better)
Translates to: KTPKWNWFRKAN*FSFTCGHGQMW
Trigger: CCACATCTGCCCGTGTCCACAGGTAAAGCTGAACAAGTTGGCCTTCCTGAACCAGTTCCACTTTGGTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563305.1
CDS CAA 72 bp ATGTACAGGGTGAGCTCCAGAGAAAAACTCAGTCCTTaGGGTGGTGGCACTCCTGCCAGTGACTCCACTATT +
Preference number: 6 (lower is better)
Translates to: MYRVSSREKLSP*GGGTPASDSTI
Trigger: AATAGTGGAGTCACTGGCAGGAGTGCCACCACCCAAAGGACTGAGTTTTTCTCTGGAGCTCACCCTGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CAA 72 bp CAGGAGACACCTGCTGCCTTCACCATTACTCTGCAATaGACCACTACTTTTCTCCCATGGCCACCCAAAAGG +
Preference number: 6 (lower is better)
Translates to: QETPAAFTITLQ*TTTFLPWPPKR
Trigger: CCTTTTGGGTGGCCATGGGAGAAAAGTAGTGGTCAATTGCAGAGTAATGGTGAAGGCAGCAGGTGTCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CAA 72 bp AAAATTGTCAGGCCAGTTCCTGCTGAGGGATGGTTATaGCCTACACGGACGTCAGCTGGGCACAGTACAATG +
Preference number: 6 (lower is better)
Translates to: KIVRPVPAEGWL*PTRTSAGHSTM
Trigger: CATTGTACTGTGCCCAGCTGACGTCCGTGTAGGCAATAACCATCCCTCAGCAGGAACTGGCCTGACAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 90 bp CTGCAGATGCAGTTTCAAGTCATCACCAGAATGAAGTCCTCCAAATaGAATGGTTCGCTGTCACCTTCACCCAGCAGTCCATGTAGCCCT +
Preference number: 6 (lower is better)
Translates to: LQMQFQVITRMKSSK*NGSLSPSPSSPCSP
Trigger: AGGGCTACATGGACTGCTGGGTGAAGGTGACAGCGAACCATTCAATTTGGAGGACTTCATTCTGGTGATGACTTGAAACTGCATCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566322.6
CDS TCA 72 bp AACCAAGCCCCAGCTACTCCTAGAGTAAGGCATGGGTaGGAAAAGATGCTTTGCTCAGTAAACTTGGGTGGT +
Preference number: 6 (lower is better)
Translates to: NQAPATPRVRHG*EKMLCSVNLGG
Trigger: ACCACCCAAGTTTACTGAGCAAAGCATCTTTTCTCACCCATGCCTTACTCTAGGAGTAGCTGGGGCTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568298.1
CDS CAA 90 bp TGGCTCCACAGGCTAGAGACTATTCTTCTAGATTGTAGGCAAGGGTaGGATGGCATGGAAAGCTTTTCATACCGAGGTCTGAACTCCAAG +
Preference number: 6 (lower is better)
Translates to: WLHRLETILLDCRQG*DGMESFSYRGLNSK
Trigger: CTTGGAGTTCAGACCTCGGTATGAAAAGCTTTCCATGCCATCCAACCCTTGCCTACAATCTAGAAGAATAGTCTCTAGCCTGTGGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5
CDS CAA 72 bp AGGCTAGAGACTATTCTTCTAGATTGTAGGCAAGGGTaGGATGGCATGGAAAGCTTTTCATACCGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: RLETILLDCRQG*DGMESFSYRGL
Trigger: CAGACCTCGGTATGAAAAGCTTTCCATGCCATCCAACCCTTGCCTACAATCTAGAAGAATAGTCTCTAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568620.5