RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP6AP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000071553

Ensembl transcript IDs: ENST00000369762.7, ENST00000422890.5, ENST00000429585.5, ENST00000439372.6, ENST00000446552.1, ENST00000449556.5, ENST00000455205.5, ENST00000484908.2, ENST00000491569.5, ENST00000619046.5, ENST00000677332.1, ENST00000677342.1, ENST00000678317.1, ENST00000679241.1

Found 1025 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGT +
Preference number: 1 (lower is better)
Translates to: QPSTPCSCPALPVGT*QTAGDRTQPTCRGG
Trigger: ACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 90 bp GAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTC +
Preference number: 1 (lower is better)
Translates to: EGNNQAPHAPARHSR*EHAKQPAIAPSPPV
Trigger: GACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 90 bp ACGGGCCACCCTGGAAGGGCGGACCGCTGTGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGCCCGATGAC +
Preference number: 1 (lower is better)
Translates to: TGHPGRADRCEGRCV*DIFGLECAQDLPDD
Trigger: GTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTTCCAGGGTGGCCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR TCA 90 bp AGGGGCTGGCCCCGAGCTTCTCCTGCAGGTAAGTGGTCAGAGTGCTaGCTGCATACCAGTCGACGGCAGGAAGCACCAGTGAGGAGGGGG +
Preference number: 1 (lower is better)
Translates to: RGWPRASPAGKWSEC*LHTSRRQEAPVRRG
Trigger: CCCCCTCCTCACTGGTGCTTCCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACCACTTACCTGCAGGAGAAGCTCGGGGCCAGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR GCA 90 bp TCCTTGAGCTGGCCAAGAGCACACCTCGCCCAGGACCCTCGCATTTaGTGTTCCAGGAATGTCCTTCCCCAAACGGCTCCCTCCCTCCAT +
Preference number: 1 (lower is better)
Translates to: SLSWPRAHLAQDPRI*CSRNVLPQTAPSLH
Trigger: ATGGAGGGAGGGAGCCGTTTGGGGAAGGACATTCCTGGAACAGCAAATGCGAGGGTCCTGGGCGAGGTGTGCTCTTGGCCAGCTCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CCA 90 bp ACAGGAGGATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCCACCACGGCTACATCACGGGCCACC +
Preference number: 1 (lower is better)
Translates to: TGGWITGDTGCFCSS*RPSPPATTATSRAT
Trigger: GGTGGCCCGTGATGTAGCCGTGGTGGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATCCTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR CCA 90 bp GGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTaGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACT +
Preference number: 1 (lower is better)
Translates to: GNMPNSRRSHPAHLS*RSLPSQATEINPCT
Trigger: AGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 90 bp GAGTCAGCCGCCTTGCCCACCCTACAGACAAGAGGAACTGGCCTCTaGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCT +
Preference number: 1 (lower is better)
Translates to: ESAALPTLQTRGTGL*SVASSNQVGAISEA
Trigger: AGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGTTCCTCTTGTCTGTAGGGTGGGCAAGGCGGCTGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439372.6
3UTR CCA 90 bp TTCTCTCACTCACTGTGCTCCAGCCACACCAGCTCTTCCTTGAGCTaGCCAAGAGCACACCTCGCCCAGGACCCTCGCATTTGCTGTTCC +
Preference number: 1 (lower is better)
Translates to: FSHSLCSSHTSSSLS*PRAHLAQDPRICCS
Trigger: GGAACAGCAAATGCGAGGGTCCTGGGCGAGGTGTGCTCTTGGCCAGCTCAAGGAAGAGCTGGTGTGGCTGGAGCACAGTGAGTGAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR TCA 90 bp GGTCAGAGTGCTGACTGCATACCAGTCGACGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAGGGCATTCATATTGGACTAAGTCAG +
Preference number: 1 (lower is better)
Translates to: GQSADCIPVDGRKHQ*GGGQVQGIHIGLSQ
Trigger: CTGACTTAGTCCAATATGAATGCCCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677332.1
3UTR GCA 90 bp CTGAAGAGGGAGCAAGATGGGCTGAGGGGAGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGT +
Preference number: 1 (lower is better)
Translates to: LKREQDGLRGACSSC*SRKREALQSSALQG
Trigger: ACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 90 bp GGAGTAGGAGTCAGCCGCCTTGCCCACCCTACAGACAAGAGGAACTaGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTC +
Preference number: 1 (lower is better)
Translates to: GVGVSRLAHPTDKRN*PLVRRFLQSSWCHF
Trigger: GAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGTTCCTCTTGTCTGTAGGGTGGGCAAGGCGGCTGACTCCTACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439372.6
3UTR TCA 90 bp CTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTaGAGCGTTTACTACAGGCCTTCCCATGAGACGACCCACACCTCC +
Preference number: 1 (lower is better)
Translates to: LQSSWCHFRGCRHAH*SVYYRPSHETTHTS
Trigger: GGAGGTGTGGGTCGTCTCATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
3UTR TCA 90 bp ACCACCATCTGCCCACACAGCAACCAAGGGAGACTACAAGGGCAATaGGCCATACAGGCCACCAACAAGGGAGGGCCTAGCAGAGACTTG +
Preference number: 1 (lower is better)
Translates to: TTICPHSNQGRLQGQ*AIQATNKGGPSRDL
Trigger: CAAGTCTCTGCTAGGCCCTCCCTTGTTGGTGGCCTGTATGGCTCATTGCCCTTGTAGTCTCCCTTGGTTGCTGTGTGGGCAGATGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CCA 90 bp GTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAGAATGAACTTGAATGTCACTGTGGT +
Preference number: 1 (lower is better)
Translates to: VDFEALHGKPVPGRH*VEAVGQNELECHCG
Trigger: ACCACAGTGACATTCAAGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR TCA 90 bp TTGGGGCAAAGATCCTGGATGGGAAGGAAAACAGCATGCGGGTTATaGGCTCCAATTGGGAGGGAGGATTGGCAGACTCAGGCTGGAACC +
Preference number: 1 (lower is better)
Translates to: LGQRSWMGRKTACGL*APIGREDWQTQAGT
Trigger: GGTTCCAGCCTGAGTCTGCCAATCCTCCCTCCCAATTGGAGCTCATAACCCGCATGCTGTTTTCCTTCCCATCCAGGATCTTTGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR GCA 90 bp TGCAAACCATCTCCTACATCTCCTACCCCTTTCTCTCACTCACTGTaGTCCAGCCACACCAGCTCTTCCTTGAGCTGGCCAAGAGCACAC +
Preference number: 1 (lower is better)
Translates to: CKPSPTSPTPFSHSL*SSHTSSSLSWPRAH
Trigger: GTGTGCTCTTGGCCAGCTCAAGGAAGAGCTGGTGTGGCTGGAGCACAGTGAGTGAGAGAAAGGGGTAGGAGATGTAGGAGATGGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR GCA 90 bp AATGAGCCATACAGGCCACCAACAAGGGAGGGCCTAGCAGAGACTTaGTATCTTAGAGTCATCTCATGGTCTCCACGCCTGCTTTTGGGG +
Preference number: 1 (lower is better)
Translates to: NEPYRPPTREGLAET*YLRVISWSPRLLLG
Trigger: CCCCAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAGATAGCAAGTCTCTGCTAGGCCCTCCCTTGTTGGTGGCCTGTATGGCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CCA 90 bp ACAAGGGAGGGCCTAGCAGAGACTTGCTATCTTAGAGTCATCTCATaGTCTCCACGCCTGCTTTTGGGGCAAAGATCCTGGATGGGAAGG +
Preference number: 1 (lower is better)
Translates to: TREGLAETCYLRVIS*SPRLLLGQRSWMGR
Trigger: CCTTCCCATCCAGGATCTTTGCCCCAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAGATAGCAAGTCTCTGCTAGGCCCTCCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR TCA 90 bp GGAAAGCCCAGGAACTGCTGGTGGGTCCTGTGGGCTTTCTTTAATTaGGAAATCACACCACTCCCTGCTCCACGTTACCCAAGGCTTTCT +
Preference number: 1 (lower is better)
Translates to: GKPRNCWWVLWAFFN*EITPLPAPRYPRLS
Trigger: AGAAAGCCTTGGGTAACGTGGAGCAGGGAGTGGTGTGATTTCTCAATTAAAGAAAGCCCACAGGACCCACCAGCAGTTCCTGGGCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR GCA 90 bp GGGGCCAGGTCCAGGGCATTCTCTAGGTTAGAAAAGGCGCTGTCCTaGTTGTTTCCAAACACACCGCCATATGCTGTGAAATCCTCAATG +
Preference number: 1 (lower is better)
Translates to: GARSRAFSRLEKALS*LFPNTPPYAVKSSM
Trigger: CATTGAGGATTTCACAGCATATGGCGGTGTGTTTGGAAACAAGCAGGACAGCGCCTTTTCTAACCTAGAGAATGCCCTGGACCTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR CCA 90 bp GCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTaGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATGTGC +
Preference number: 1 (lower is better)
Translates to: AQGHTIWVKEIVGPL*SSKRSMVLRLRIMC
Trigger: GCACATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 90 bp CAGGAAGCACCAGTGAGGAGGGGGCCAGGTCCAGGGCATTCATATTaGACTAAGTCAGATATCCAAAGTGCTTGGTACTCAGTAGGTACC +
Preference number: 1 (lower is better)
Translates to: QEAPVRRGPGPGHSY*TKSDIQSAWYSVGT
Trigger: GGTACCTACTGAGTACCAAGCACTTTGGATATCTGACTTAGTCCAATATGAATGCCCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677332.1
3UTR CCA 90 bp TTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGAT +
Preference number: 1 (lower is better)
Translates to: FMSLTPHSDEPWEAG*SSIYAEYVHLVGRD
Trigger: ATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 90 bp GAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTT +
Preference number: 1 (lower is better)
Translates to: ETLEFMSLTPHSDEP*EAGWSSIYAEYVHL
Trigger: AAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 90 bp TTTCCAAACACACCGCCATATGCTGTGAAATCCTCAATGCTCAGCTaGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTC +
Preference number: 1 (lower is better)
Translates to: FPNTPPYAVKSSMLS*PLVRRFLQSSWCHF
Trigger: GAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGCTGAGCATTGAGGATTTCACAGCATATGGCGGTGTGTTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446552.1
3UTR CCA 90 bp GGTCCAGGGCATTCATATTGGACTAAGTCAGATATCCAAAGTGCTTaGTACTCAGTAGGTACCTGGCCTCTGGTCCGTCGCTTCCTCCAA +
Preference number: 1 (lower is better)
Translates to: GPGHSYWTKSDIQSA*YSVGTWPLVRRFLQ
Trigger: TTGGAGGAAGCGACGGACCAGAGGCCAGGTACCTACTGAGTACCAAGCACTTTGGATATCTGACTTAGTCCAATATGAATGCCCTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677332.1
3UTR CCA 90 bp AGACTTGCTATCTTAGAGTCATCTCATGGTCTCCACGCCTGCTTTTaGGGCAAAGATCCTGGATGGGAAGGAAAACAGCATGCGGGTTAT +
Preference number: 1 (lower is better)
Translates to: RLAILESSHGLHACF*GKDPGWEGKQHAGY
Trigger: ATAACCCGCATGCTGTTTTCCTTCCCATCCAGGATCTTTGCCCCAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAGATAGCAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR TCA 90 bp GAACTAGGACTCAGTTCCTATTTGACTATATTATTTACCACCTCCTaGAAAGACTTCAGGCCACCACCATCTGCCCACACAGCAACCAAG +
Preference number: 1 (lower is better)
Translates to: ELGLSSYLTILFTTS*KDFRPPPSAHTATK
Trigger: CTTGGTTGCTGTGTGGGCAGATGGTGGTGGCCTGAAGTCTTTTCAGGAGGTGGTAAATAATATAGTCAAATAGGAACTGAGTCCTAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR TCA 90 bp CCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: PCSCPALPVGTCQTAGDRGRKHQ*GGGQVQ
Trigger: CTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCC...GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp CGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTTCAGCTCCCGCAGGGTaGCCAGGTCCACATGCAAGG +
Preference number: 2 (lower is better)
Translates to: RHSRWEHAKQPAIAPSPPSAPAG*PGPHAR
Trigger: CCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTGA...AGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp ACCACGGCTACATCACGGGCCACCCTGGAAGGGCGGACCGCTGTGAGGGCCGCTGGACATCTTCGGACTTaGGTGTGCTCAGGACCTGCC +
Preference number: 2 (lower is better)
Translates to: TTATSRATLEGRTAVRAAGHLRT*VCSGPA
Trigger: GGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCC...AGCGGCCCTCACAGCGGTCCGCCCTTCCAGGGTGGCCCGTGATGTAGCCGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp CAGCTCCCGCAGGGTGGCCAGGTCCACATGCAAGGGGCTGGCCCCGAGCTTCTCGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 2 (lower is better)
Translates to: QLPQGGQVHMQGAGPELLGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...GAGAAGCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp GGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCCTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 2 (lower is better)
Translates to: GTCQTAGDRTQPTCRGGPLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...GGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ACCACGGCTACATCACGGGCCACCCTGGAAGGGCGGACCGCTGTGAGGGCCGCTCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 2 (lower is better)
Translates to: TTATSRATLEGRTAVRAAQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...AGCGGCCCTCACAGCGGTCCGCCCTTCCAGGGTGGCCCGTGATGTAGCCGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp CGACGGCAGGAAGCACCAGTGAGGAGGGGGCCAGGTCCAGGGCATTCTCTAGGTGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 2 (lower is better)
Translates to: RRQEAPVRRGPGPGHSLGARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...ACCTAGAGAATGCCCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCCGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp CCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: PCSCPALPVGTCQTAGDRSSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp AACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCG +
Preference number: 2 (lower is better)
Translates to: NQAPHAPARHSRWEHAKQQPSTP*SCPALP
Trigger: CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG...CTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp CCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGAGGAGTCAGCCGCCTTaGCCACCCTACAGACAAGAG +
Preference number: 2 (lower is better)
Translates to: PMLLPGTPGGNMPNSRRSRSQPP*PPYRQE
Trigger: CTCTTGTCTGTAGGGTGGGCAAGGCGGCTGACTCCT...CGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp CATCCAGATGCCGGGGGAGAAGAAGCTGGCACAGTCGCTGGCGTAGGAGAACTGGTGGCCAGGTCCACATaGAAGGGGCTGGCCCCGAGC +
Preference number: 2 (lower is better)
Translates to: HPDAGGEEAGTVAGVGELVARST*KGLAPS
Trigger: GCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCAC...CAGTTCTCCTACGCCAGCGACTGTGCCAGCTTCTTCTCCCCCGGCATCTGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp GTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCGCAGCCCCATCCAGATaGCGGGGGAGAAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: VRCRVGKQQHGHRPTLNPAAPSR*RGRRSW
Trigger: CCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGC...GGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 2 (lower is better)
Translates to: RHSRWEHAKQPAIAPSPPQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...AGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: PMLLPGTPGGNMPNSRRSEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...CGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: PARHSRWEHAKQPAIAPSPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...GCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp TGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAG +
Preference number: 2 (lower is better)
Translates to: CPALPVGTCQTAGDRTQPEGRCV*DIFGLE
Trigger: CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTC...GGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp GCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGACATACTCGCAGTGCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: AGHEETTLLAQAADILAVPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...CACTGCGAGTATGTCAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp AAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGAAGGGCGGACCGCTGTaGGGGCCGCTGTGTATGGGA +
Preference number: 2 (lower is better)
Translates to: KETTKHPMLLPGTPGGNMKGGPL*GPLCMG
Trigger: TCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTT...CATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp AAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCG +
Preference number: 2 (lower is better)
Translates to: KETTKHPMLLPGTPGGNMQPSTP*SCPALP
Trigger: CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG...CATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp GGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: GTCQTAGDRTQPTCRGGPEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...GGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CGACGGCAGGAAGCACCAGTGAGGAGGGGGCCAGGTCCAGGGCATTCTCTAGGTCCAGCCCACCTGTCGTaGAGGTCCCTTCCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: RRQEAPVRRGPGPGHSLGPAHLS*RSLPSQ
Trigger: CTGAGAAGGAAGGGACCTCCACGACAGGTGGGCTGG...ACCTAGAGAATGCCCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCCGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CCA 90 bp AACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAAGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: NNQAPHAPARHSRWEHAKVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...TTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CAA 90 bp GGGCGGACCGCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTaGAGTGTGCTCAGGACCTGCCCGATGACCTCATCGTTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: GRTAVRAAVYGTSSD*SVLRTCPMTSSLPV
Trigger: CACAGGCAACGATGAGGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGTCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR TCA 90 bp ACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: TCQTAGDRTQPTCRGGPFGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...GAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR TCA 90 bp TCCTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: SLYATEKFWAQNRIRGAVPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...CACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp ACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 2 (lower is better)
Translates to: TCQTAGDRTQPTCRGGPFRSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...GAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp GGAGAGGGCTGCGTGCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGTGTCGCCATGCCCACTaGAGCGTTTACTACAGGCCT +
Preference number: 2 (lower is better)
Translates to: GEGCVRATRRLPFLLRLLCRHAH*SVYYRP
Trigger: AGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACA...CAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGCACGCAGCCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR TCA 90 bp CCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: PMLLPGTPGGNMPNSRRSAPPLR*KPGSGS
Trigger: ACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGC...CGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp CTGCGTGCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGACATACTCCTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 2 (lower is better)
Translates to: LRAGHEETTLLAQAADILLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...GAGTATGTCAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGCACGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCGCTGCCTTGGGTCCTTaGAGCCACCTGAAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: TCQTAGDRTQPTCRGGPFAALGP*SHLKKQ
Trigger: CTGCTTCTTCAGGTGGCTGCAAGGACCCAAGGCAGC...GAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677342.1
3UTR CAA 90 bp GGGCGGACCGCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTaGAGTGTGCTCAGGACCTGCCCGATGACCTCATCTGAGGGTCAA +
Preference number: 2 (lower is better)
Translates to: GRTAVRAAVYGTSSD*SVLRTCPMTSSEGQ
Trigger: TTGACCCTCAGATGAGGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGTCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677332.1
3UTR-3UTR TCA 90 bp GCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTTCGTTCATAGGTCAGTaGGAGCCTAAGCTGCCTTGG +
Preference number: 2 (lower is better)
Translates to: ALPVGTCQTAGDRTQPTCSFIGQ*EPKLPW
Trigger: CCAAGGCAGCTTAGGCTCTCACTGACCTATGAACGA...ACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677342.1
3UTR-3UTR GCA 90 bp GCTGGCTGTGTAGGGCAGGCGAATGAGCAGCAGAGCAGGGAGGCTGGCATTGAGAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: AGCVGQANEQQSREAGIESSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...CTCAATGCCAGCCTCCCTGCTCTGCTGCTCATTCGCCTGCCCTACACAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp ACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAACTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 2 (lower is better)
Translates to: TPCWERWGQPKKAPQRAELPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...TTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGAGGAGTCAGCCGCCTTaGCCACCCTACAGACAAGAG +
Preference number: 2 (lower is better)
Translates to: GDGAIAVDFEALHGKPVPRSQPP*PPYRQE
Trigger: CTCTTGTCTGTAGGGTGGGCAAGGCGGCTGACTCCT...CGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp GCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGTAGAGGACTTCCCTGGGTaGCATCAGACCAGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: AVDFEALHGKPVPGRHWVEDFPG*HQTRAG
Trigger: GCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC...TACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp CTGGGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCGCAGCCCCATCCAGATaGCGGGGGAGAAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: LGSIEVGDGAIAVDFEALAAPSR*RGRRSW
Trigger: CCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGC...GAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: MPNSRRSHPAHLSWRSLPPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...AGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CTGCACCCCAAAGGTGAGGGGAGTCAGGTCCTCCCACTGGTCCTTGTACGCCACTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: LHPKGEGSQVLPLVLVRHCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...GTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp GTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: VGRDGGSPRKLLSGLKRECFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...CTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp TTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAAGCTGGCACAGTCGCTaGCGTAGGAGAACTGCTCCC +
Preference number: 2 (lower is better)
Translates to: LGRKQPSTPCSCPALPVGSWHSR*RRRTAP
Trigger: GGGAGCAGTTCTCCTACGCCAGCGACTGTGCCAGCT...TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CAA 90 bp TTCCTTGAGCTGGCCAAGAGCACACCTCGCCCAGGACCCTCGCATTaGCTGTTCCAGGAATGTCCTTCCCCAAACGGCTCCCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: FLELAKSTPRPGPSH*LFQECPSPNGSLPP
Trigger: TGGAGGGAGGGAGCCGTTTGGGGAAGGACATTCCTGGAACAGCAAATGCGAGGGTCCTGGGCGAGGTGTGCTCTTGGCCAGCTCAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR TCA 90 bp AACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAAAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 2 (lower is better)
Translates to: NNQAPHAPARHSRWEHAKRSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...TTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp GGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: GLASTQNMYTLLGEMGAAGRKHQ*GGGQVQ
Trigger: CTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCC...GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp GTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGAAGTGGTCAGAGTGCTaGCTGCATACCAGTCGACGG +
Preference number: 2 (lower is better)
Translates to: VGRDGGSPRKLLSGLKREKWSEC*LHTSRR
Trigger: CCGTCGACTGGTATGCAGTCAGCACTCTGACCACTT...CTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp TGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCTTCAGTCCAGTGCGCTaGAGGGTGGGAAAGCAACAA +
Preference number: 2 (lower is better)
Translates to: WEHAKQPAIAPSPPVVEVFSPVR*RVGKQQ
Trigger: TTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAA...GACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTCGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: AKQPAIAPSPPVVEVPSFGACSS*CSRKRE
Trigger: TTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC...GAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 2 (lower is better)
Translates to: IVGPLWSSKRSMVLRLRISTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...GATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ATAGCATCCCAGTCACTCTGTCCCCTTAGCCTGCTTCCTTCCCTAAAGGCCGTAAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 2 (lower is better)
Translates to: IASQSLCPLSLLPSLKAVSTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...TACGGCCTTTAGGGAAGGAAGCAGGCTAAGGGGACAGAGTGACTGGGATGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR GCA 90 bp ATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAAAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 2 (lower is better)
Translates to: IEVGDGAIAVDFEALHGKSTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...TTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp GTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: VGRDGGSPRKLLSGLKREPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...CTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ACTGCATACCAGTCGACGGCAGGAAGCACCAGTGAGGAGGGGGCCAGGTCCAGGATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: TAYQSTAGSTSEEGARSRICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...CCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCCGTCGACTGGTATGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp CATCCAGATGCCGGGGGAGAAGAAGCTGGCACAGTCGCTGGCGTAGGAGAACTGCACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: HPDAGGEEAGTVAGVGELHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...CAGTTCTCCTACGCCAGCGACTGTGCCAGCTTCTTCTCCCCCGGCATCTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp TGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGCCCGATGACCTCGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: CVWDIFGLECAQDLPDDLVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...GAGGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp ACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCACATGGAAGGCAGTCATaGGGTGGGGAGATCTGCAGG +
Preference number: 2 (lower is better)
Translates to: TEPLLWTSRRSMVNQCRAHGRQS*GGEICR
Trigger: CCTGCAGATCTCCCCACCCCATGACTGCCTTCCATG...TGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CCA 90 bp GTAGATGCTGGGCCCTGTGACCTGGGAAGCATTGAAGTAGGCGACGGAGCCATTCCACATGCAAGGGGCTaGCCCCGAGCTTCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: VDAGPCDLGSIEVGDGAIPHARG*PRASPA
Trigger: TGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGG...AATGGCTCCGTCGCCTACTTCAATGCTTCCCAGGTCACAGGGCCCAGCATCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR CAA 90 bp TTCCCTAACCTGTTTGGTATACACACTCGCCCAGCCTCCCCTCCCTaGTGGGCAGGACCTTGCTGCTGTTTGGCCACCGGGGTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: FPNLFGIHTRPASPP*WAGPCCCLATGVLS
Trigger: ACTGAGAACCCCGGTGGCCAAACAGCAGCAAGGTCCTGCCCACAAGGGAGGGGAGGCTGGGCGAGTGTGTATACCAAACAGGTTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR TCA 90 bp GATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCGACCTAGCCCTCCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: DGSQVILAVFVAAGDLALPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...GAGGGCTAGGTCGCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp GCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCTGTCGCCATGCCCACTaGAGCGTTTACTACAGGCCT +
Preference number: 2 (lower is better)
Translates to: ALQSSALQGGKATTRTPSCRHAH*SVYYRP
Trigger: AGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACA...GGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR TCA 90 bp AACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGAGATCTGCAGGCAGCTaGCTTGTGGTAACTCAGGAG +
Preference number: 2 (lower is better)
Translates to: NQAPHAPARHSRWEHAKQRSAGS*LVVTQE
Trigger: CTCCTGAGTTACCACAAGTCAGCTGCCTGCAGATCT...CTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp CTGCACCCCAAAGGTGAGGGGAGTCAGGTCCTCCCACTGGTCCTTGTACGCCACTTCAGTCCAGTGCGCTaGAGGGTGGGAAAGCAACAA +
Preference number: 2 (lower is better)
Translates to: LHPKGEGSQVLPLVLVRHFSPVR*RVGKQQ
Trigger: TTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAA...GTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp ACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 2 (lower is better)
Translates to: TPCWERWGQPKKAPQRAEGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...TTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCCAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCG +
Preference number: 2 (lower is better)
Translates to: TQNMYTLLGEMGAAQESSQPSTP*SCPALP
Trigger: CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG...GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACGTGGCCAGGTCCACATaGAAGGGGCTGGCCCCGAGC +
Preference number: 2 (lower is better)
Translates to: TATNPGKLVGLASTQNMYVARST*KGLAPS
Trigger: GCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCAC...GTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp GAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 2 (lower is better)
Translates to: EALQSSALQGGKATTRTPQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...CGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 2 (lower is better)
Translates to: TQNMYTLLGEMGAAQESSARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp GAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 2 (lower is better)
Translates to: EPLLWTSRRSMVNQCRADATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...GTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp GAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 2 (lower is better)
Translates to: EALQSSALQGGKATTRTPTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...CGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAACCATCAGACCAGAGCTaGCTGTGTAGGGCAGGCGAA +
Preference number: 2 (lower is better)
Translates to: TPCWERWGQPKKAPQRAEPSDQS*LCRAGE
Trigger: TTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGG...TTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR CAA 90 bp GGGAGTCAGGTCCTCCCACTGGTCCTTGTACGCCACAGAGAAGTTTaGGGCCCAGAACAGGATCCGGGGAGCGGTGTCATTGTAACTCAC +
Preference number: 2 (lower is better)
Translates to: GSQVLPLVLVRHREV*GPEQDPGSGVIVTH
Trigger: GTGAGTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp GCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCTTCAGTCCAGTGCGCTaGAGGGTGGGAAAGCAACAA +
Preference number: 2 (lower is better)
Translates to: ALQSSALQGGKATTRTPSFSPVR*RVGKQQ
Trigger: TTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAA...GGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAAGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: GRDGGSPRKLLSGLKREQACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...TTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp AGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGAGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 2 (lower is better)
Translates to: RGKLFSPVRCRVGKQQHGGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...TCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp TGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 2 (lower is better)
Translates to: CPLRLTATNPGKLVGLASGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...AGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ATTTTATTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGCTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 2 (lower is better)
Translates to: ILLGRKQPSTPCSCPALPLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp CACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTACAAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 2 (lower is better)
Translates to: HTPKLREPYNLKEGAFATSTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...TGTAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp AAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: KQPSTPCSCPALPVGTCQICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...TTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CATCCAGATGCCGGGGGAGAAGAAGCTGGCACAGTCGCTGGCGTAGGAGAACTGCCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 2 (lower is better)
Translates to: HPDAGGEEAGTVAGVGELPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...CAGTTCTCCTACGCCAGCGACTGTGCCAGCTTCTTCTCCCCCGGCATCTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp GTAGATGCTGGGCCCTGTGACCTGGGAAGCATTGAAGTAGGCGACGGAGCCATTCACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: VDAGPCDLGSIEVGDGAIHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...AATGGCTCCGTCGCCTACTTCAATGCTTCCCAGGTCACAGGGCCCAGCATCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp AGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 2 (lower is better)
Translates to: RICTPCWERWGQPKKAPQARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...CTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp GGCCCAGAACAGGATCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: GPEQDPGSGVIVTHRRMDCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...ATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp CGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 2 (lower is better)
Translates to: RLTATNPGKLVGLASTQNVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...ATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp TTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATGTGCAGGCCAGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: LWSSKRSMVLRLRIMCRPVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...TGGCCTGCACATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ATTTTATTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGTCAGCTCCCGCAGGGTaGCCAGGTCCACATGCAAGG +
Preference number: 2 (lower is better)
Translates to: ILLGRKQPSTPCSCPALPSAPAG*PGPHAR
Trigger: CCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTGA...CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp CCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGAGGCTGGAACCAAAGTaGTATCTATCAACTGTAGTG +
Preference number: 2 (lower is better)
Translates to: PMLLPGTPGGNMPNSRRSRLEPK*YLSTVV
Trigger: CACTACAGTTGATAGATACCACTTTGGTTCCAGCCT...CGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CAA 90 bp CCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTaGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: PGKLVGLASTQNMYT*LGEMGAAQESSSAG
Trigger: GCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CAA 90 bp CTCAATGCTCAGCTGGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTaGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTA +
Preference number: 2 (lower is better)
Translates to: LNAQLASGPSLPPIK*VPFPRLSPCPLKRL
Trigger: TAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGCTGAGCATTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446552.1
3UTR CAA 90 bp CTCAGTAGGTACCTGGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTaGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTA +
Preference number: 2 (lower is better)
Translates to: LSRYLASGPSLPPIK*VPFPRLSPCPLKRL
Trigger: TAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGGTACCTACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR TCA 90 bp GAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: EFMSLTPHSDEPWEAGWSGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...AGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR TCA 90 bp AGTAGTACTTCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: SSTSTLPNSGSPITLRREPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...CTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGAAGTACTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp GTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGGCACCCGTTGCCTGTaGGGACTTCCCTGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: VGLASTQNMYTLLGEMGAGTRCL*GLPWVP
Trigger: TGGCACCCAGGGAAGTCCTCACAGGCAACGGGTGCC...TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677332.1
3UTR-3UTR TCA 90 bp GAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTTTCCTCTGGTTCCCCTaGGCTCACTGCCCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: ETLEFMSLTPHSDEPWEAFLWFP*AHCPSF
Trigger: AAAGGAGGGGCAGTGAGCTCAGGGGAACCAGAGGAA...AGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677342.1
3UTR-3UTR GCA 90 bp GCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGACATACTCGCAGTGGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: AGHEETTLLAQAADILAVACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...CACTGCGAGTATGTCAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp TTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LGRKQPSTPCSCPALPVGGACSS*CSRKRE
Trigger: TTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC...TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: EPLLWTSRRSMVNQCRADGACSS*CSRKRE
Trigger: TTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC...GTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp AGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAAGATGGGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: RWGQPKKAPQRAEEGARWGACSS*CSRKRE
Trigger: TTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC...CCATCTTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: GSIEVGDGAIAVDFEALHVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...ATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp AGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 2 (lower is better)
Translates to: SGALVVIKAIHGLEAEDHRRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...ATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 2 (lower is better)
Translates to: GLASTQNMYTLLGEMGAARRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp AAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAAGGATCCAGTCACATTaGAAGGTCGGAACAGAGCTG +
Preference number: 2 (lower is better)
Translates to: KQPSTPCSCPALPVGTCQRIQSH*KVGTEL
Trigger: CAGCTCTGTTCCGACCTTGCAATGTGACTGGATCCT...TTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677342.1
3UTR-3UTR CCA 90 bp CTGGCAAAGGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCACAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 2 (lower is better)
Translates to: LAKESFQKEPVRLSSCTPQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...TGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCCTTTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp CGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGCCCGATGACCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: RCVWDIFGLECAQDLPDDPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...GTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp AGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 2 (lower is better)
Translates to: SSSVQCAAGWESNNTDTVPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...GACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp AGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 2 (lower is better)
Translates to: RIHVPYASQRRTLGSWLVTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...GACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp GAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAG +
Preference number: 2 (lower is better)
Translates to: EEGSSSVQCAAGWESNNTEGRCV*DIFGLE
Trigger: CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTC...CGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR CAA 90 bp AGACAAGAGGAACTGGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTaGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTA +
Preference number: 2 (lower is better)
Translates to: RQEELASGPSLPPIK*VPFPRLSPCPLKRL
Trigger: TAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGTTCCTCTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439372.6
3UTR-3UTR TCA 90 bp AGGGGAGCTTGCAGTTCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: RGACSSCCSRKREALQSSGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...ACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR TCA 90 bp GGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCATCGGACATCTTCGGACTTaGGTGTGCTCAGGACCTGCC +
Preference number: 2 (lower is better)
Translates to: GTGSHNLGQRNSGALVVIGHLRT*VCSGPA
Trigger: GGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCC...GATGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp GAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: EIVGPLWSSKRSMVLRLRSSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...CCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp CCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: PLLWTSRRSMVNQCRADTACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...AGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp AGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 2 (lower is better)
Translates to: SGALVVIKAIHGLEAEDHGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...ATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ATAGCATCCCAGTCACTCTGTCCCCTTAGCCTGCTTCCTTCCCTAAAGGCCGTATGGGGTGGGGAGATCTaGAGGCAGCTGACTTGTGGT +
Preference number: 2 (lower is better)
Translates to: IASQSLCPLSLLPSLKAVWGGEI*RQLTCG
Trigger: ACCACAAGTCAGCTGCCTGCAGATCTCCCCACCCCA...TACGGCCTTTAGGGAAGGAAGCAGGCTAAGGGGACAGAGTGACTGGGATGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CCA 90 bp CACCTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: HLSWRSLPSQATEINPCTEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...AGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp GAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: EVGDGAIAVDFEALHGKPICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...TGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp TCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: SLTPHSDEPWEAGWSSIYICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...GTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ACTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCCACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: TGTGSHNLGQRNSGALVVHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...GACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCATGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: LAQGHTIWVKEIVGPLWSCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...TGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp ATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAAGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 2 (lower is better)
Translates to: IEVGDGAIAVDFEALHGKVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...TTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp TCCTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGAGGTCAGTGAGAGCCTaGCAAAGGAGTCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: SLYATEKFWAQNRIRGAVRSVRA*QRSHSR
Trigger: TCTGGAATGACTCCTTTGCCAGGCTCTCACTGACCT...CACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp ACTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 2 (lower is better)
Translates to: TGTGSHNLGQRNSGALVVTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...GACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR TCA 90 bp GTCGCTGGCGTAGGAGAACTGCTCCCCCATTACGTTGAAAGCCTGGATCTGGAAAGATCTGCAGGCAGCTaGCTTGTGGTAACTCAGGAG +
Preference number: 2 (lower is better)
Translates to: VAGVGELLPHYVESLDLERSAGS*LVVTQE
Trigger: CTCCTGAGTTACCACAAGTCAGCTGCCTGCAGATCT...TTCCAGATCCAGGCTTTCAACGTAATGGGGGAGCAGTTCTCCTACGCCAGCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp TACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 2 (lower is better)
Translates to: YAEYVHLVGRDGGSPRKLGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...GAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GAGAAAGGAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: EKGDPRIHVPYASQRRTLVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...CAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTCCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp GGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCGGTCAGAGTGCTGACTaGATACCAGTCGACGGCAGG +
Preference number: 2 (lower is better)
Translates to: GWSSIYAEYVHLVGRDGGGQSAD*IPVDGR
Trigger: CCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACC...GCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp ACTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCAGTGTGCTCAGGACCTaGCCGATGACCTCATCGTTG +
Preference number: 2 (lower is better)
Translates to: TGTGSHNLGQRNSGALVVSVLRT*PMTSSL
Trigger: CAACGATGAGGTCATCGGGCAGGTCCTGAGCACACT...GACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CCA 90 bp TACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: YAEYVHLVGRDGGSPRKLEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...GAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: IEVGDGAIAVDFEALHGKPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...TTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp AGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCCCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 2 (lower is better)
Translates to: RIHVPYASQRRTLGSWLVPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...GACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCAGAGGAACTGGCCTCTaGTCCGTCGCTTCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: TQNMYTLLGEMGAAQESSRGTGL*SVASSN
Trigger: ATTGGAGGAAGCGACGGACCAGAGGCCAGTTCCTCT...GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439372.6
3UTR-3UTR CCA 90 bp TACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCATGGAAGGCAGTCATaGGGTGGGGAGATCTGCAGG +
Preference number: 2 (lower is better)
Translates to: YAEYVHLVGRDGGSPRKLHGRQS*GGEICR
Trigger: CCTGCAGATCTCCCCACCCCATGACTGCCTTCCATG...GAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR CAA 90 bp TACTGGCCACCCTCACAAGAATGTCAGCTTCCTGAGGGTGGGGGCTaGGGTTCTTCTGCTCACTGCCATATCCCCAACACTTCACAATAC +
Preference number: 2 (lower is better)
Translates to: YWPPSQECQLPEGGG*GSSAHCHIPNTSQY
Trigger: GTATTGTGAAGTGTTGGGGATATGGCAGTGAGCAGAAGAACCCAAGCCCCCACCCTCAGGAAGCTGACATTCTTGTGAGGGTGGCCAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR TCA 90 bp GTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: VGLASTQNMYTLLGEMGAGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR TCA 90 bp ATTTTATTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: ILLGRKQPSTPCSCPALPAPPLR*KPGSGS
Trigger: ACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGC...CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR TCA 90 bp ATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAAAGACTACAAGGGCAATaGGCCATACAGGCCACCAAC +
Preference number: 2 (lower is better)
Translates to: IEVGDGAIAVDFEALHGKRLQGQ*AIQATN
Trigger: GTTGGTGGCCTGTATGGCTCATTGCCCTTGTAGTCT...TTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR GCA 90 bp ATTTTATTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGTTCAGTCCAGTGCGCTaGAGGGTGGGAAAGCAACAA +
Preference number: 2 (lower is better)
Translates to: ILLGRKQPSTPCSCPALPFSPVR*RVGKQQ
Trigger: TTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAA...CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp AGTAGTACTTCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: SSTSTLPNSGSPITLRRESSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...CTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGAAGTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GAGGACTTCCCTGGGTGCCATCAGACCAGAGCTGGCTGTGTAGGGCAGGCGAATAAACACACCGCCATATaGTGTGAAATCCTCAATGCT +
Preference number: 2 (lower is better)
Translates to: EDFPGCHQTRAGCVGQANKHTAI*CEILNA
Trigger: AGCATTGAGGATTTCACAGCATATGGCGGTGTGTTT...ATTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp AGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGAGTGTGCTCAGGACCTaGCCGATGACCTCATCGTTG +
Preference number: 2 (lower is better)
Translates to: RICTPCWERWGQPKKAPQSVLRT*PMTSSL
Trigger: CAACGATGAGGTCATCGGGCAGGTCCTGAGCACACT...CTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp CTGCTTGTTTCCAAACACACCGCCATATGCTGTGAAATCCTCAATGCTCAGCTCTGGGCAGGACCTTGCTaGTGTTTGGCCACCGGGGTT +
Preference number: 2 (lower is better)
Translates to: LLVSKHTAICCEILNAQLWAGPC*CLATGV
Trigger: AACCCCGGTGGCCAAACAGCAGCAAGGTCCTGCCCA...GAGCTGAGCATTGAGGATTTCACAGCATATGGCGGTGTGTTTGGAAACAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CCA 90 bp ATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCCCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 2 (lower is better)
Translates to: IVGPLWSSKRSMVLRLRIPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...GATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp AGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCATAGTGGGGCCCTTGTaGTCATCAAAGCGATCCATG +
Preference number: 2 (lower is better)
Translates to: RIHVPYASQRRTLGSWLVIVGPL*SSKRSM
Trigger: CATGGATCGCTTTGATGACCACAAGGGCCCCACTAT...GACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CAA 90 bp CTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTaGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATG +
Preference number: 2 (lower is better)
Translates to: LAQGHTIWVKEIVGP*WSSKRSMVLRLRIM
Trigger: CATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp TCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTTCAGTCCAGTGCGCTaGAGGGTGGGAAAGCAACAA +
Preference number: 2 (lower is better)
Translates to: STQNMYTLLGEMGAAQESFSPVR*RVGKQQ
Trigger: TTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAA...GCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: TQNMYTLLGEMGAAQESSACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: IVGPLWSSKRSMVLRLRIGACSS*CSRKRE
Trigger: TTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC...GATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp CCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: PGKLVGLASTQNMYTLLGVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...TCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR GCA 90 bp ACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCATCAAAGGTCAGAGTGCTGACTaGATACCAGTCGACGGCAGG +
Preference number: 2 (lower is better)
Translates to: TGSHNLGQRNSGALVVIKGQSAD*IPVDGR
Trigger: CCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACC...TTTGATGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp ACAAAAGCACTATCCACAGCCAGGGATGATGTAGCCACAAGAATAAATAAGGAGGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 2 (lower is better)
Translates to: TKALSTARDDVATRINKEARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...CTCCTTATTTATTCTTGTGGCTACATCATCCCTGGCTGTGGATAGTGCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ATTTGCTACACAAAAGCACTATCCACAGCCAGGGATGATGTAGCCACAAGAATAGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 2 (lower is better)
Translates to: ICYTKALSTARDDVATRIARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...TATTCTTGTGGCTACATCATCCCTGGCTGTGGATAGTGCTTTTGTGTAGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp TCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTAGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 2 (lower is better)
Translates to: STLPNSGSPITLRREHLLATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...TAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp GGGAGCATTTGCTACACAAAAGCACTATCCACAGCCAGGGATGATGTAGCCACAGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 2 (lower is better)
Translates to: GSICYTKALSTARDDVATATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...TGTGGCTACATCATCCCTGGCTGTGGATAGTGCTTTTGTGTAGCAAATGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp GGCAGACACTGGGTAGAGGCGGTTGGCCAGAATGAACTTGAATGTCACTGTGGTAGGTCAGTGAGAGCCTaGCAAAGGAGTCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: GRHWVEAVGQNELECHCGRSVRA*QRSHSR
Trigger: TCTGGAATGACTCCTTTGCCAGGCTCTCACTGACCT...ACCACAGTGACATTCAAGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp AGGGGAGCTTGCAGTTCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTAGGTCAGTGAGAGCCTaGCAAAGGAGTCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: RGACSSCCSRKREALQSSRSVRA*QRSHSR
Trigger: TCTGGAATGACTCCTTTGCCAGGCTCTCACTGACCT...ACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp ACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTACTTCCACACTCCCAAAGGCAGTCATGGGGTaGGGAGATCTGCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: TITTAKQDRQLSSTSTLPKAVMG*GDLQAA
Trigger: AGCTGCCTGCAGATCTCCCCACCCCATGACTGCCTT...TGGGAGTGTGGAAGTACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR CAA 90 bp GCCAGGTCCAGGGCATTCTCTAGGTTAGAAAAGGCGCTGTCCTGCTaGTTTCCAAACACACCGCCATATGCTGTGAAATCCTCAATGCTC +
Preference number: 2 (lower is better)
Translates to: ARSRAFSRLEKALSC*FPNTPPYAVKSSML
Trigger: GAGCATTGAGGATTTCACAGCATATGGCGGTGTGTTTGGAAACAAGCAGGACAGCGCCTTTTCTAACCTAGAGAATGCCCTGGACCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR TCA 90 bp AAAGGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAAAGGTCACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: KGVIPEGASQVEFLHPKGHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...ACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp TCCACAGCCAGGGATGATGTAGCCACAAGAATAAATAAGGAGAAAGGAGACCCTAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: STARDDVATRINKEKGDPSSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...AGGGTCTCCTTTCTCCTTATTTATTCTTGTGGCTACATCATCCCTGGCTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp AAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTACTTCCACACTCAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 2 (lower is better)
Translates to: KTITTAKQDRQLSSTSTLRRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...GAGTGTGGAAGTACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTACACCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 2 (lower is better)
Translates to: HTPKLREPYNLKEGAFATPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...TGTAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTACTTCCACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 2 (lower is better)
Translates to: HQKTITTAKQDRQLSSTSTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...GGAAGTACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTAGCTGGCACAGTCGCTaGCGTAGGAGAACTGCTCCC +
Preference number: 2 (lower is better)
Translates to: QHHQKTITTAKQDRQLSSSWHSR*RRRTAP
Trigger: GGGAGCAGTTCTCCTACGCCAGCGACTGTGCCAGCT...ACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACATAGTGGGGCCCTTGTaGTCATCAAAGCGATCCATG +
Preference number: 2 (lower is better)
Translates to: TATNPGKLVGLASTQNMYIVGPL*SSKRSM
Trigger: CATGGATCGCTTTGATGACCACAAGGGCCCCACTAT...GTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp TGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGCCCGATGACCTCGATATCCAAAGTGCTTaGTACTCAGTAGGTACCTGG +
Preference number: 2 (lower is better)
Translates to: CVWDIFGLECAQDLPDDLDIQSA*YSVGTW
Trigger: CCAGGTACCTACTGAGTACCAAGCACTTTGGATATC...GAGGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455205.5
ENST00000677332.1
3UTR CAA 90 bp GAGACTTGCTATCTTAGAGTCATCTCATGGTCTCCACGCCTGCTTTaGGGGCAAAGATCCTGGATGGGAAGGAAAACAGCATGCGGGTTA +
Preference number: 2 (lower is better)
Translates to: ETCYLRVISWSPRLL*GQRSWMGRKTACGL
Trigger: TAACCCGCATGCTGTTTTCCTTCCCATCCAGGATCTTTGCCCCAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAGATAGCAAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR TCA 90 bp AAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTACTTCCACACTCGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: KTITTAKQDRQLSSTSTLGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...GAGTGTGGAAGTACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR TCA 90 bp CAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTGAGGGTGCAGTGAGCTaGGCTGACATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: QHHQKTITTAKQDRQLSSEGAVS*ADIAPL
Trigger: CAGTGGTGCAATGTCAGCTCAGCTCACTGCACCCTC...ACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR GCA 90 bp AAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTACTTCCACACTCAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: KTITTAKQDRQLSSTSTLSSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...GAGTGTGGAAGTACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAAAGGTGAGGTCAGATATCCAAAGTaGTTGGTACTCAGTAGGTAC +
Preference number: 2 (lower is better)
Translates to: GVIPEGASQVEFLHPKGEVRYPK*LVLSRY
Trigger: GTACCTACTGAGTACCAAGCACTTTGGATATCTGAC...CTCACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp GAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATTGTTACACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: EVPSFSGHRNKPVYFLLLHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...TAACAATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp TTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACCCAGCCCACCTGTCGTaGAGGTCCCTTCCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: FLLLAQHHQKTITTAKQDPAHLS*RSLPSQ
Trigger: CTGAGAAGGAAGGGACCTCCACGACAGGTGGGCTGG...GTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 2 (lower is better)
Translates to: QHHQKTITTAKQDRQLSSVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...ACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp CAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTAAGGCAGTCATGGGGTaGGGAGATCTGCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: QHHQKTITTAKQDRQLSSKAVMG*GDLQAA
Trigger: AGCTGCCTGCAGATCTCCCCACCCCATGACTGCCTT...ACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CCA 90 bp GGCCACAGAAATAAACCCGTGTACTTCTTATTGTTAGCACAACATCACCAGAAACCACATGCAAGGGGCTaGCCCCGAGCTTCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: GHRNKPVYFLLLAQHHQKPHARG*PRASPA
Trigger: TGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGG...TTTCTGGTGATGTTGTGCTAACAATAAGAAGTACACGGGTTTATTTCTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp TACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTTAGAGTCATCTCATaGTCTCCACGCCTGCTTTTG +
Preference number: 2 (lower is better)
Translates to: YAEYVHLVGRDGGSPRKLLRVIS*SPRLLL
Trigger: CAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAG...GAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR TCA 90 bp CACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTACTTCCTCGTTCATAGGTCAGTaGGAGCCTGGCAAAGGAGTC +
Preference number: 2 (lower is better)
Translates to: HQKTITTAKQDRQLSSTSSFIGQ*EPGKGV
Trigger: GACTCCTTTGCCAGGCTCTCACTGACCTATGAACGA...GGAAGTACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR TCA 90 bp GTTTCCAAACACACCGCCATATGCTGTGAAATCCTCAATGCTCAGCTCTTCCCTCACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VSKHTAICCEILNAQLFPHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...AGGGAAGAGCTGAGCATTGAGGATTTCACAGCATATGGCGGTGTGTTTGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp ACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCATCAAAGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: TGSHNLGQRNSGALVVIKACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...TTTGATGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp GGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCGTCAGATATCCAAAGTaGTTGGTACTCAGTAGGTAC +
Preference number: 2 (lower is better)
Translates to: GLASTQNMYTLLGEMGAAVRYPK*LVLSRY
Trigger: GTACCTACTGAGTACCAAGCACTTTGGATATCTGAC...GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CCA 90 bp ACCCGTGTACTTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 2 (lower is better)
Translates to: TRVLLIVSTTSPENDNDSQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...GCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAAGTACACGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp ACCCGTGTACTTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: TRVLLIVSTTSPENDNDSEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...GCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAAGTACACGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CCA 90 bp CACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTACTTCCATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: HQKTITTAKQDRQLSSTSICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...GGAAGTACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR TCA 90 bp GGCCACAGAAATAAACCCGTGTACTTCTTATTGTTAGCACAACATCACCAGAAAGTCCTTGCAGCCACCTaGAGAAGCAGTGTCCCCACT +
Preference number: 2 (lower is better)
Translates to: GHRNKPVYFLLLAQHHQKVLAAT*RSSVPT
Trigger: AGTGGGGACACTGCTTCTTCAGGTGGCTGCAAGGAC...TTTCTGGTGATGTTGTGCTAACAATAAGAAGTACACGGGTTTATTTCTGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677342.1
3UTR-3UTR GCA 90 bp ATTTGCTACACAAAAGCACTATCCACAGCCAGGGATGATGTAGCCACAAGAATACCGAGGCTGTCGCCATaGCCACTGAAGCGTTTACTA +
Preference number: 2 (lower is better)
Translates to: ICYTKALSTARDDVATRIPRLSP*PLKRLL
Trigger: TAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGG...TATTCTTGTGGCTACATCATCCCTGGCTGTGGATAGTGCTTTTGTGTAGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CCA 90 bp GGCCACAGAAATAAACCCGTGTACTTCTTATTGTTAGCACAACATCACCAGAAACACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: GHRNKPVYFLLLAQHHQKHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...TTTCTGGTGATGTTGTGCTAACAATAAGAAGTACACGGGTTTATTTCTGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR TCA 90 bp GAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATTGTTAAGCAGTGTCCCCACTTaGCAGATAGGAAAACTGAGG +
Preference number: 2 (lower is better)
Translates to: EVPSFSGHRNKPVYFLLLSSVPT*QIGKLR
Trigger: CCTCAGTTTTCCTATCTGTCAAGTGGGGACACTGCT...TAACAATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677342.1
3UTR CAA 90 bp GTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATaGTTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGCAG +
Preference number: 2 (lower is better)
Translates to: VPSFSGHRNKPVYFL*LAQHHQKTITTAKQ
Trigger: CTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR GCA 90 bp ACCCGTGTACTTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCGAAAAGGCGCTGTCCTaGTTGTTTCCAAACACACCG +
Preference number: 2 (lower is better)
Translates to: TRVLLIVSTTSPENDNDSEKALS*LFPNTP
Trigger: CGGTGTGTTTGGAAACAAGCAGGACAGCGCCTTTTC...GCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAAGTACACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR GCA 90 bp CAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTAAACACACCGCCATATaGTGTGAAATCCTCAATGCT +
Preference number: 2 (lower is better)
Translates to: QHHQKTITTAKQDRQLSSKHTAI*CEILNA
Trigger: AGCATTGAGGATTTCACAGCATATGGCGGTGTGTTT...ACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CCA 90 bp CAGACTCAGGCTGGAACCAAAGTGGTATCTATCAACTGTAGTGAAACATTGTATGATATCCAAAGTGCTTaGTACTCAGTAGGTACCTGG +
Preference number: 2 (lower is better)
Translates to: QTQAGTKVVSINCSETLYDIQSA*YSVGTW
Trigger: CCAGGTACCTACTGAGTACCAAGCACTTTGGATATC...ATACAATGTTTCACTACAGTTGATAGATACCACTTTGGTTCCAGCCTGAGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp GGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGACCCAGGTCCCCCTaGCCACCAGCATGGGGGTCC +
Preference number: 3 (lower is better)
Translates to: GDGAIAVDFEALHGKPVPGPRSP*PPAWGS
Trigger: GGACCCCCATGCTGGTGGCAAGGGGGACCTGGGTCC...CGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677342.1
3UTR CCA 72 bp AACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCGGCGATCGCACCCAGC +
Preference number: 3 (lower is better)
Translates to: NQAPHAPARHSR*EHAKQPAIAPS
Trigger: GCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 72 bp GCTCCCGCAGGGTGGCCAGGTCCACATGCAAGGGGCTaGCCCCGAGCTTCTCCTGCAGGTAAGTGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: APAGWPGPHARG*PRASPAGKWSE
Trigger: CTCTGACCACTTACCTGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCACCCTGCGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR TCA 72 bp TGGCGGGCGCCCTGTAATCCTAGCTACTCGGGAGGCTaGGGCAGAGAACTGCTTGAACCCGGGAGGCGGAGG +
Preference number: 3 (lower is better)
Translates to: WRAPCNPSYSGG*GRELLEPGRRR
Trigger: CCTCCGCCTCCCGGGTTCAAGCAGTTCTCTGCCTCAGCCTCCCGAGTAGCTAGGATTACAGGGCGCCCGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp TGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCAAGGAGCCAGTCAGGTaGAGTTCCTGCACCCCAAAG +
Preference number: 3 (lower is better)
Translates to: CPALPVGTCQTAGDRTQPKEPVR*SSCTPK
Trigger: CTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTT...GGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR CCA 72 bp CCTCCCCTCCCTTGTGGGCAGGACCTTGCTGCTGTTTaGCCACCGGGGTTCTCAGTCGGAAAGCCCAGGAAC +
Preference number: 3 (lower is better)
Translates to: PPLPCGQDLAAV*PPGFSVGKPRN
Trigger: GTTCCTGGGCTTTCCGACTGAGAACCCCGGTGGCCAAACAGCAGCAAGGTCCTGCCCACAAGGGAGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp CGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTAAGGCGCTGTCCTGCTaGTTTCCAAACACACCGCCA +
Preference number: 3 (lower is better)
Translates to: RHSRWEHAKQPAIAPSPPKALSC*FPNTPP
Trigger: TGGCGGTGTGTTTGGAAACAAGCAGGACAGCGCCTT...AGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CAA 90 bp GTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGGTCACCAGGCACCCGTaGCCTGTGAGGACTTCCCTG +
Preference number: 3 (lower is better)
Translates to: VGRDGGSPRKLLSGLKREVTRHP*PVRTSL
Trigger: CAGGGAAGTCCTCACAGGCAACGGGTGCCTGGTGAC...CTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677332.1
3UTR CCA 72 bp CCTGGAAGGGCGGACCGCTGTGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAGTGTGCTCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: PGRADRCEGRCV*DIFGLECAQDL
Trigger: CAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp CGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTCAGAATATGTACACCTaGTTGGGAGAGATGGGGGCA +
Preference number: 3 (lower is better)
Translates to: RHSRWEHAKQPAIAPSPPQNMYT*LGEMGA
Trigger: TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTG...AGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp CGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATGCAGGGAGGCTGGCATaGAGCTTCAGCTCCCGCAGG +
Preference number: 3 (lower is better)
Translates to: RLTATNPGKLVGLASTQNAGRLA*SFSSRR
Trigger: CCTGCGGGAGCTGAAGCTCAATGCCAGCCTCCCTGC...ATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR GCA 72 bp GATGACCTCATCGTTGCCTGTGAGGACTTCCCTGGGTaGCATCAGACCAGAGCTGGCTGTGTAGGGCAGGCG +
Preference number: 3 (lower is better)
Translates to: DDLIVACEDFPG*HQTRAGCVGQA
Trigger: CGCCTGCCCTACACAGCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTCACAGGCAACGATGAGGTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR CCA 72 bp TCACTGTGCTCCAGCCACACCAGCTCTTCCTTGAGCTaGCCAAGAGCACACCTCGCCCAGGACCCTCGCATT +
Preference number: 3 (lower is better)
Translates to: SLCSSHTSSSLS*PRAHLAQDPRI
Trigger: AATGCGAGGGTCCTGGGCGAGGTGTGCTCTTGGCCAGCTCAAGGAAGAGCTGGTGTGGCTGGAGCACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp TCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCAAGGAGCCAGTCAGGTaGAGTTCCTGCACCCCAAAG +
Preference number: 3 (lower is better)
Translates to: SVQCAAGWESNNTDTVPPKEPVR*SSCTPK
Trigger: CTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTT...GGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR TCA 72 bp CCCCGAGCTTCTCCTGCAGGTAAGTGGTCAGAGTGCTaGCTGCATACCAGTCGACGGCAGGAAGCACCAGTG +
Preference number: 3 (lower is better)
Translates to: PRASPAGKWSEC*LHTSRRQEAPV
Trigger: CACTGGTGCTTCCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACCACTTACCTGCAGGAGAAGCTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR TCA 72 bp GGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTaGCATACTCGCAGTGGAAGGAGTAGATGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: GPRGDYPSCSGC*HTRSGRSRCWA
Trigger: GGCCCAGCATCTACTCCTTCCACTGCGAGTATGTCAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR TCA 72 bp GCTGACTGCATACCAGTCGACGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAGGGCATTCATATTGGA +
Preference number: 3 (lower is better)
Translates to: ADCIPVDGRKHQ*GGGQVQGIHIG
Trigger: TCCAATATGAATGCCCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCCGTCGACTGGTATGCAGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677332.1
3UTR CCA 72 bp GAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGACACCGTCCCACCCTCA +
Preference number: 3 (lower is better)
Translates to: EEGSSSVQCAAG*ESNNTDTVPPS
Trigger: TGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 72 bp CCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTaGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAAC +
Preference number: 3 (lower is better)
Translates to: PNSRRSHPAHLS*RSLPSQATEIN
Trigger: GTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 72 bp GTCAGCCGCCTTGCCCACCCTACAGACAAGAGGAACTaGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTTGG +
Preference number: 3 (lower is better)
Translates to: VSRLAHPTDKRN*PLVRRFLQSSW
Trigger: CCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGTTCCTCTTGTCTGTAGGGTGGGCAAGGCGGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439372.6
3UTR-3UTR CAA 90 bp GTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGTCCTCCCACTGGTCCTaGTACGCCACAGAGAAGTTT +
Preference number: 3 (lower is better)
Translates to: VGRDGGSPRKLLSGLKRESSHWS*YATEKF
Trigger: AAACTTCTCTGTGGCGTACAAGGACCAGTGGGAGGA...CTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp CCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCTTGGCCAGAATGAACTaGAATGTCACTGTGGTACCA +
Preference number: 3 (lower is better)
Translates to: PCSCPALPVGTCQTAGDRLARMN*NVTVVP
Trigger: TGGTACCACAGTGACATTCAAGTTCATTCTGGCCAA...GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp GTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGTGCTCCCCCATTACGTaGAAAGCCTGGATCTGGAAG +
Preference number: 3 (lower is better)
Translates to: VGRDGGSPRKLLSGLKRECSPIT*KAWIWK
Trigger: CTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGCA...CTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp CTGCGTGCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGACATACTCTCTCCACGCCTGCTTTaGGGGCAAAGATCCTGGATG +
Preference number: 3 (lower is better)
Translates to: LRAGHEETTLLAQAADILSPRLL*GQRSWM
Trigger: CATCCAGGATCTTTGCCCCAAAAGCAGGCGTGGAGA...GAGTATGTCAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGCACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp GGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCCCCGTGTACTTCTTATaGTTAGCACAACATCACCAG +
Preference number: 3 (lower is better)
Translates to: GTCQTAGDRTQPTCRGGPPVYFL*LAQHHQ
Trigger: CTGGTGATGTTGTGCTAACAATAAGAAGTACACGGG...GGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp CGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGCCCGATGACCGCCACAGAGAAGTTTaGGGCCCAGAACAGGATCCG +
Preference number: 3 (lower is better)
Translates to: RCVWDIFGLECAQDLPDDRHREV*GPEQDP
Trigger: CGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCG...GTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp GAGGACTTCCCTGGGTGCCATCAGACCAGAGCTGGCTGTGTAGGGCAGGCGAATTCCTCCCACTGGTCCTaGTACGCCACAGAGAAGTTT +
Preference number: 3 (lower is better)
Translates to: EDFPGCHQTRAGCVGQANSSHWS*YATEKF
Trigger: AAACTTCTCTGTGGCGTACAAGGACCAGTGGGAGGA...ATTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp GTAGATGCTGGGCCCTGTGACCTGGGAAGCATTGAAGTAGGCGACGGAGCCATTCCGATGACCTCATCGTaGCCTGTGAGGACTTCCCTG +
Preference number: 3 (lower is better)
Translates to: VDAGPCDLGSIEVGDGAIPMTSS*PVRTSL
Trigger: CAGGGAAGTCCTCACAGGCAACGATGAGGTCATCGG...AATGGCTCCGTCGCCTACTTCAATGCTTCCCAGGTCACAGGGCCCAGCATCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CAA 90 bp ACTTCAGGCCACCACCATCTGCCCACACAGCAACCAAGGGAGACTACAAGGGCACCGATGACCTCATCGTaGCCTGTGAGGACTTCCCTG +
Preference number: 3 (lower is better)
Translates to: TSGHHHLPTQQPRETTRAPMTSS*PVRTSL
Trigger: CAGGGAAGTCCTCACAGGCAACGATGAGGTCATCGG...TGCCCTTGTAGTCTCCCTTGGTTGCTGTGTGGGCAGATGGTGGTGGCCTGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR TCA 72 bp TGCCCACACAGCAACCAAGGGAGACTACAAGGGCAATaGGCCATACAGGCCACCAACAAGGGAGGGCCTAGC +
Preference number: 3 (lower is better)
Translates to: CPHSNQGRLQGQ*AIQATNKGGPS
Trigger: GCTAGGCCCTCCCTTGTTGGTGGCCTGTATGGCTCATTGCCCTTGTAGTCTCCCTTGGTTGCTGTGTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp CCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGAATATGTACACCTTGTaGGGAGAGATGGGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: PLRLTATNPGKLVGLASTNMYTL*GEMGAA
Trigger: GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATT...CGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp CCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTAATATGTACACCTTGTaGGGAGAGATGGGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: PLLWTSRRSMVNQCRADTNMYTL*GEMGAA
Trigger: GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATT...AGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp AAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAACAGAATATGTACACCTaGTTGGGAGAGATGGGGGCA +
Preference number: 3 (lower is better)
Translates to: KQPSTPCSCPALPVGTCQQNMYT*LGEMGA
Trigger: TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTG...TTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp ATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTCCCGTGTACTTCTTATaGTTAGCACAACATCACCAG +
Preference number: 3 (lower is better)
Translates to: MPNSRRSHPAHLSWRSLPPVYFL*LAQHHQ
Trigger: CTGGTGATGTTGTGCTAACAATAAGAAGTACACGGG...AGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp ACCGCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGAAGCGATCCATGGTCTaGAGGCTGAGGATCATGTGC +
Preference number: 3 (lower is better)
Translates to: TAVRAAVYGTSSDLSVLRKRSMV*RLRIMC
Trigger: GCACATGATCCTCAGCCTCAAGACCATGGATCGCTT...CCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp CTGGGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCAAGCGATCCATGGTCTaGAGGCTGAGGATCATGTGC +
Preference number: 3 (lower is better)
Translates to: LGSIEVGDGAIAVDFEALKRSMV*RLRIMC
Trigger: GCACATGATCCTCAGCCTCAAGACCATGGATCGCTT...GAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR TCA 72 bp AGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTaGAGCGTTTACTACAGGCCTTCCCATGAGACGACC +
Preference number: 3 (lower is better)
Translates to: SWCHFRGCRHAH*SVYYRPSHETT
Trigger: GGTCGTCTCATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
3UTR GCA 72 bp TTATTAGGAAGGAAACAACCAAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGAACATGCCAAACAGCC +
Preference number: 3 (lower is better)
Translates to: LLGRKQPSTPCS*PALPVGTCQTA
Trigger: GGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 72 bp GAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAGAATGAACTTGAATGT +
Preference number: 3 (lower is better)
Translates to: EALHGKPVPGRH*VEAVGQNELEC
Trigger: ACATTCAAGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 72 bp GCCTTGCCCACCCTACAGACAAGAGGAACTGGCCTCTaGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATT +
Preference number: 3 (lower is better)
Translates to: ALPTLQTRGTGL*SVASSNQVGAI
Trigger: AATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGTTCCTCTTGTCTGTAGGGTGGGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439372.6
3UTR CCA 72 bp TGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCCACCACGGCTACATCA +
Preference number: 3 (lower is better)
Translates to: WITGDTGCFCSS*RPSPPATTATS
Trigger: TGATGTAGCCGTGGTGGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp GTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCTTAAGGAGGGAGCATTaGCTACACAAAAGCACTATC +
Preference number: 3 (lower is better)
Translates to: VRCRVGKQQHGHRPTLNPLRREH*LHKSTI
Trigger: GATAGTGCTTTTGTGTAGCAAATGCTCCCTCCTTAA...GGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR GCA 72 bp AGGGAGCAAGATGGGCTGAGGGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: REQDGLRGACSS*CSRKREALQSS
Trigger: ACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR GCA 72 bp TATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTaGCCGATGACCTCATCGTTGCCTGTGAGGACTTCC +
Preference number: 3 (lower is better)
Translates to: YGTSSDLSVLRT*PMTSSLPVRTS
Trigger: GGAAGTCCTCACAGGCAACGATGAGGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CAA 90 bp TCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCACAGAATATGTACACCTaGTTGGGAGAGATGGGGGCA +
Preference number: 3 (lower is better)
Translates to: SCPLRLTATNPGKLVGLAQNMYT*LGEMGA
Trigger: TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTG...TGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp GTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGTAGAGAGATATCCAAAGTGCTaGGTACTCAGTAGGTACCTG +
Preference number: 3 (lower is better)
Translates to: VDFEALHGKPVPGRHWVERYPKC*VLSRYL
Trigger: CAGGTACCTACTGAGTACCAAGCACTTTGGATATCT...CTCTACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp GCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTCAACTGTAGTGAAACATaGTATCTCGACAAACCTTAC +
Preference number: 3 (lower is better)
Translates to: AKQPAIAPSPPVVEVPSFNCSET*YLDKPY
Trigger: GTAAGGTTTGTCGAGATACAATGTTTCACTACAGTT...GAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp CTGGGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCAAGCAGTGTCCCCACTaGACAGATAGGAAAACTGAG +
Preference number: 3 (lower is better)
Translates to: LGSIEVGDGAIAVDFEALKQCPH*TDRKTE
Trigger: CTCAGTTTTCCTATCTGTCAAGTGGGGACACTGCTT...GAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677342.1
3UTR TCA 72 bp TATTTACTGGCCACCCTCACAAGAATGTCAGCTTCCTaGGGGTGGGGGCTTGGGTTCTTCTGCTCACTGCCA +
Preference number: 3 (lower is better)
Translates to: YLLATLTRMSAS*GWGLGFFCSLP
Trigger: TGGCAGTGAGCAGAAGAACCCAAGCCCCCACCCTCAGGAAGCTGACATTCTTGTGAGGGTGGCCAGTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR GCA 72 bp TACAGGCCACCAACAAGGGAGGGCCTAGCAGAGACTTaGTATCTTAGAGTCATCTCATGGTCTCCACGCCTG +
Preference number: 3 (lower is better)
Translates to: YRPPTREGLAET*YLRVISWSPRL
Trigger: CAGGCGTGGAGACCATGAGATGACTCTAAGATAGCAAGTCTCTGCTAGGCCCTCCCTTGTTGGTGGCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR GCA 72 bp CTTCCTGAGGGTGGGGGCTTGGGTTCTTCTGCTCACTaGCATATCCCCAACACTTCACAATACCTGGCACAT +
Preference number: 3 (lower is better)
Translates to: LPEGGGLGSSAH*HIPNTSQYLAH
Trigger: ATGTGCCAGGTATTGTGAAGTGTTGGGGATATGGCAGTGAGCAGAAGAACCCAAGCCCCCACCCTCAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR GCA 72 bp TATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTaGCCGATGACCTCATCTGAGGGTCAACAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: YGTSSDLSVLRT*PMTSSEGQQGE
Trigger: CTCTCCTTGTTGACCCTCAGATGAGGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677332.1
3UTR CCA 72 bp CATCTACGCAGAATATGTACACCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAA +
Preference number: 3 (lower is better)
Translates to: HLRRICTPCWER*GQPKKAPQRAE
Trigger: TTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 72 bp ACACCGCCATATGCTGTGAAATCCTCAATGCTCAGCTaGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTTGG +
Preference number: 3 (lower is better)
Translates to: TPPYAVKSSMLS*PLVRRFLQSSW
Trigger: CCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGCTGAGCATTGAGGATTTCACAGCATATGGCGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446552.1
3UTR-3UTR CAA 90 bp AGGGGAGCTTGCAGTTCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTAATATGTACACCTTGTaGGGAGAGATGGGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: RGACSSCCSRKREALQSSNMYTL*GEMGAA
Trigger: GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATT...ACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp AGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCCAGAATATGTACACCTaGTTGGGAGAGATGGGGGCA +
Preference number: 3 (lower is better)
Translates to: RIHVPYASQRRTLGSWLVQNMYT*LGEMGA
Trigger: TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTG...GACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp AGGGGAGCTTGCAGTTCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTCTTCCTCCAATCAAGTaGGTGCCATTTCCGAGGCTG +
Preference number: 3 (lower is better)
Translates to: RGACSSCCSRKREALQSSLPPIK*VPFPRL
Trigger: CAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAG...ACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CAA 90 bp TTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAGCAGGGAGGCTGGCATaGAGCTTCAGCTCCCGCAGG +
Preference number: 3 (lower is better)
Translates to: LAQHHQKTITTAKQDRQLAGRLA*SFSSRR
Trigger: CCTGCGGGAGCTGAAGCTCAATGCCAGCCTCCCTGC...TAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR TCA 72 bp AGTCGCTGGCGTAGGAGAACTGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGTCCTGAAGCATCATCT +
Preference number: 3 (lower is better)
Translates to: SRWRRRTAPPLR*KPGSGSPEASS
Trigger: AGATGATGCTTCAGGACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGCAGTTCTCCTACGCCAGCGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR GCA 72 bp GGCGCTGTCCTGCTTGTTTCCAAACACACCGCCATATaGTGTGAAATCCTCAATGCTCAGCTCTTCCCTCCA +
Preference number: 3 (lower is better)
Translates to: GAVLLVSKHTAI*CEILNAQLFPP
Trigger: TGGAGGGAAGAGCTGAGCATTGAGGATTTCACAGCATATGGCGGTGTGTTTGGAAACAAGCAGGACAGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR CCA 72 bp GGCCTAGCAGAGACTTGCTATCTTAGAGTCATCTCATaGTCTCCACGCCTGCTTTTGGGGCAAAGATCCTGG +
Preference number: 3 (lower is better)
Translates to: GLAETCYLRVIS*SPRLLLGQRSW
Trigger: CCAGGATCTTTGCCCCAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAGATAGCAAGTCTCTGCTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp ATTTTATTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGCAGAATATGTACACCTaGTTGGGAGAGATGGGGGCA +
Preference number: 3 (lower is better)
Translates to: ILLGRKQPSTPCSCPALPQNMYT*LGEMGA
Trigger: TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTG...CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp ATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACAGAATATGTACACCTaGTTGGGAGAGATGGGGGCA +
Preference number: 3 (lower is better)
Translates to: IEVGDGAIAVDFEALHGKQNMYT*LGEMGA
Trigger: TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTG...TTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp AAAGGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAAAGGTTCCTCCCACTGGTCCTaGTACGCCACAGAGAAGTTT +
Preference number: 3 (lower is better)
Translates to: KGVIPEGASQVEFLHPKGSSHWS*YATEKF
Trigger: AAACTTCTCTGTGGCGTACAAGGACCAGTGGGAGGA...ACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp CTGTGGTACCAAAGAGTCGTTCATAGGTCAGTGAGAGCCTGGCAAAGGAGTCATAATATGTACACCTTGTaGGGAGAGATGGGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: LWYQRVVHRSVRAWQRSHNMYTL*GEMGAA
Trigger: GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATT...ATGACTCCTTTGCCAGGCTCTCACTGACCTATGAACGACTCTTTGGTACCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp GCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGCCCGATGACCTTAAGGAGGGAGCATTaGCTACACAAAAGCACTATC +
Preference number: 3 (lower is better)
Translates to: AVYGTSSDLSVLRTCPMTLRREH*LHKSTI
Trigger: GATAGTGCTTTTGTGTAGCAAATGCTCCCTCCTTAA...GGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp CCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGATCCTCCCACTGGTCCTaGTACGCCACAGAGAAGTTT +
Preference number: 3 (lower is better)
Translates to: PGKLVGLASTQNMYTLLGSSHWS*YATEKF
Trigger: AAACTTCTCTGTGGCGTACAAGGACCAGTGGGAGGA...TCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR TCA 72 bp AGGAACTGCTGGTGGGTCCTGTGGGCTTTCTTTAATTaGGAAATCACACCACTCCCTGCTCCACGTTACCCA +
Preference number: 3 (lower is better)
Translates to: RNCWWVLWAFFN*EITPLPAPRYP
Trigger: TGGGTAACGTGGAGCAGGGAGTGGTGTGATTTCTCAATTAAAGAAAGCCCACAGGACCCACCAGCAGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR GCA 72 bp TTTATTTTATTAGGAAGGAAACAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCGGTGGGAACATGCCAA +
Preference number: 3 (lower is better)
Translates to: FILLGRKQPSTP*SCPALPVGTCQ
Trigger: TTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR GCA 72 bp ATGGCCTACAAGGTCCTACTTCATCGCCTAGCCACCTaGAAACCATCTCCTACATCTCCTACCCCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: MAYKVLLHRLAT*KPSPTSPTPFS
Trigger: AGAGAAAGGGGTAGGAGATGTAGGAGATGGTTTGCAGGTGGCTAGGCGATGAAGTAGGACCTTGTAGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CCA 72 bp CTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAATATGTACACCTTGTT +
Preference number: 3 (lower is better)
Translates to: LTPHSDEPWEAG*SSIYAEYVHLV
Trigger: AACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 72 bp GAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGCATCTACGCAGAATAT +
Preference number: 3 (lower is better)
Translates to: EFMSLTPHSDEP*EAGWSSIYAEY
Trigger: ATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 72 bp CACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTaGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: HTIWVKEIVGPL*SSKRSMVLRLR
Trigger: CCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CCA 72 bp TCAGATATCCAAAGTGCTTGGTACTCAGTAGGTACCTaGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTTGG +
Preference number: 3 (lower is better)
Translates to: SDIQSAWYSVGT*PLVRRFLQSSW
Trigger: CCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGGTACCTACTGAGTACCAAGCACTTTGGATATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CCA 72 bp CCACCATATTGGACTAAGTCAGATATCCAAAGTGCTTaGTACTCAGTAGGTACCTGGCCTCTGGTCCGTCGC +
Preference number: 3 (lower is better)
Translates to: PPYWTKSDIQSA*YSVGTWPLVRR
Trigger: GCGACGGACCAGAGGCCAGGTACCTACTGAGTACCAAGCACTTTGGATATCTGACTTAGTCCAATATGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CCA 72 bp CCAGTGAGGAGGGGGCCAGGTCCAGGGCATTCATATTaGACTAAGTCAGATATCCAAAGTGCTTGGTACTCA +
Preference number: 3 (lower is better)
Translates to: PVRRGPGPGHSY*TKSDIQSAWYS
Trigger: TGAGTACCAAGCACTTTGGATATCTGACTTAGTCCAATATGAATGCCCTGGACCTGGCCCCCTCCTCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677332.1
3UTR-3UTR CAA 90 bp AGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTTAAGGAGGGAGCATTaGCTACACAAAAGCACTATC +
Preference number: 3 (lower is better)
Translates to: RIHVPYASQRRTLGSWLVLRREH*LHKSTI
Trigger: GATAGTGCTTTTGTGTAGCAAATGCTCCCTCCTTAA...GACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp TTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTACGCCACAGAGAAGTTTaGGGCCCAGAACAGGATCCG +
Preference number: 3 (lower is better)
Translates to: LAQHHQKTITTAKQDRQLRHREV*GPEQDP
Trigger: CGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCG...TAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp CCTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTGGCCAGAATGAACTaGAATGTCACTGTGGTACCA +
Preference number: 3 (lower is better)
Translates to: PVVEVPSFSGHRNKPVYFLARMN*NVTVVP
Trigger: TGGTACCACAGTGACATTCAAGTTCATTCTGGCCAA...GAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp TCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATCTTCCTCCAATCAAGTaGGTGCCATTTCCGAGGCTG +
Preference number: 3 (lower is better)
Translates to: SWRSLPSQATEINPCTSYLPPIK*VPFPRL
Trigger: CAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAG...ATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR-3UTR CAA 90 bp ACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTACTTCCACACTCCCACAGAATATGTACACCTaGTTGGGAGAGATGGGGGCA +
Preference number: 3 (lower is better)
Translates to: TITTAKQDRQLSSTSTLPQNMYT*LGEMGA
Trigger: TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTG...TGGGAGTGTGGAAGTACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp CCTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTAAGGAGGGAGCATTaGCTACACAAAAGCACTATC +
Preference number: 3 (lower is better)
Translates to: PVVEVPSFSGHRNKPVYFLRREH*LHKSTI
Trigger: GATAGTGCTTTTGTGTAGCAAATGCTCCCTCCTTAA...GAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp CACCTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTATTAGCTGTATGAGCTaGGACAAGTCACTTAACCTC +
Preference number: 3 (lower is better)
Translates to: HLSWRSLPSQATEINPCTISCMS*DKSLNL
Trigger: GAGGTTAAGTGACTTGTCCAAGCTCATACAGCTAAT...AGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR GCA 72 bp TCCAGGGCATTCTCTAGGTTAGAAAAGGCGCTGTCCTaGTTGTTTCCAAACACACCGCCATATGCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: SRAFSRLEKALS*LFPNTPPYAVK
Trigger: TTTCACAGCATATGGCGGTGTGTTTGGAAACAAGCAGGACAGCGCCTTTTCTAACCTAGAGAATGCCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR GCA 72 bp CTTGCTATCTTAGAGTCATCTCATGGTCTCCACGCCTaGTTTTGGGGCAAAGATCCTGGATGGGAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: LAILESSHGLHA*FWGKDPGWEGK
Trigger: TTTTCCTTCCCATCCAGGATCTTTGCCCCAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAGATAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CCA 72 bp ATCTTAGAGTCATCTCATGGTCTCCACGCCTGCTTTTaGGGCAAAGATCCTGGATGGGAAGGAAAACAGCAT +
Preference number: 3 (lower is better)
Translates to: ILESSHGLHACF*GKDPGWEGKQH
Trigger: ATGCTGTTTTCCTTCCCATCCAGGATCTTTGCCCCAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp TCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTACCCGTGTACTTCTTATaGTTAGCACAACATCACCAG +
Preference number: 3 (lower is better)
Translates to: STLPNSGSPITLRREHLLPVYFL*LAQHHQ
Trigger: CTGGTGATGTTGTGCTAACAATAAGAAGTACACGGG...TAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp GTCAAAGAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGTTGGCCAGAATGAACTaGAATGTCACTGTGGTACCA +
Preference number: 3 (lower is better)
Translates to: VKEIVGPLWSSKRSMVLRLARMN*NVTVVP
Trigger: TGGTACCACAGTGACATTCAAGTTCATTCTGGCCAA...CCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTCTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp CCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGATTGGCCAGAATGAACTaGAATGTCACTGTGGTACCA +
Preference number: 3 (lower is better)
Translates to: PGKLVGLASTQNMYTLLGLARMN*NVTVVP
Trigger: TGGTACCACAGTGACATTCAAGTTCATTCTGGCCAA...TCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp GTGTACTTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGGGGACATCTTCGGACTaGAGTGTGCTCAGGACCTGC +
Preference number: 3 (lower is better)
Translates to: VYFLLLAQHHQKTITTAKGTSSD*SVLRTC
Trigger: GCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCC...CTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAAGTACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp TCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTATTAAGGAGGGAGCATTaGCTACACAAAAGCACTATC +
Preference number: 3 (lower is better)
Translates to: STLPNSGSPITLRREHLLLRREH*LHKSTI
Trigger: GATAGTGCTTTTGTGTAGCAAATGCTCCCTCCTTAA...TAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp ACAAAAGCACTATCCACAGCCAGGGATGATGTAGCCACAAGAATAAATAAGGAGGAAATAGTGGGGCCCTaGTGGTCATCAAAGCGATCC +
Preference number: 3 (lower is better)
Translates to: TKALSTARDDVATRINKEEIVGP*WSSKRS
Trigger: GGATCGCTTTGATGACCACAAGGGCCCCACTATTTC...CTCCTTATTTATTCTTGTGGCTACATCATCCCTGGCTGTGGATAGTGCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR TCA 72 bp CAGCTAGAATTACAACTCTGCCACCCATTAGCTGTATaGGCTTGGACAAGTCACTTAACCTCCAGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: QLELQLCHPLAV*AWTSHLTSSLS
Trigger: ACTGAGGCTGGAGGTTAAGTGACTTGTCCAAGCTCATACAGCTAATGGGTGGCAGAGTTGTAATTCTAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR-3UTR CAA 90 bp GTGTACTTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGAATATGTACACCTTGTaGGGAGAGATGGGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: VYFLLLAQHHQKTITTAKNMYTL*GEMGAA
Trigger: GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATT...CTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAAGTACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp GTGTACTTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGAGGAGACTACCCTTCTaGCTCAGGCTGCTGACATAC +
Preference number: 3 (lower is better)
Translates to: VYFLLLAQHHQKTITTAKRRLPF*LRLLTY
Trigger: GTATGTCAGCAGCCTGAGCAAGAAGGGTAGTCTCCT...CTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAAGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR-3UTR CAA 90 bp TTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGATATCCAAAGTGCTaGGTACTCAGTAGGTACCTG +
Preference number: 3 (lower is better)
Translates to: LAQHHQKTITTAKQDRQLRYPKC*VLSRYL
Trigger: CAGGTACCTACTGAGTACCAAGCACTTTGGATATCT...TAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455205.5
ENST00000677332.1
3UTR-3UTR CAA 90 bp CAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTAGGAAGCATCGAGCATaGAAGTCTTTTGAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: QHHQKTITTAKQDRQLSSRKHRA*KSFELL
Trigger: TAAGAGCTCAAAAGACTTCAATGCTCGATGCTTCCT...ACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CCA 72 bp TGTCATTCACAAAGATTATTTCATGCCTCCAATGGCTaGTTACATGGTAGAACTAGGACTCAGTTCCTATTT +
Preference number: 3 (lower is better)
Translates to: CHSQRLFHASNG*LHGRTRTQFLF
Trigger: AAATAGGAACTGAGTCCTAGTTCTACCATGTAACCAGCCATTGGAGGCATGAAATAATCTTTGTGAATGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp CCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGGGGAGGGGGCCTGGCTaGCTCCCGATGACCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PMLLPGTPGGNMPNSRRSGRGPG*LPMTGG
Trigger: TCCCCCGGTCATCGGGAGGCAGCCAGGCCCCCTCCC...CGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp GCAGGGTGGCCAGGTCCACATGCAAGGGGCTGGCCCCGAGCTTCTCCTGCAGGTCGGGGGAGAGTGGGCTaGGGCGGGCGCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AGWPGPHARGWPRASPAGRGRVG*GGRTLS
Trigger: GGACAAGGTGCGCCCGCCCCAGCCCACTCTCCCCCG...ACCTGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCACCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR TCA 90 bp CCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PARHSRWEHAKQPAIAPSGRKHQ*GGGQVQ
Trigger: CTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCC...GCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GCAGGGTGGCCAGGTCCACATGCAAGGGGCTGGCCCCGAGCTTCTCCTGCAGGTCTGGCTGCCTCCCGATaGCCGGGGGAGAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGWPGPHARGWPRASPAGLAASR*PGESGL
Trigger: CAGCCCACTCTCCCCCGGTCATCGGGAGGCAGCCAG...ACCTGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCACCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp CATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCATGCGCCAGAGCGCCTaGGCGCACCGCGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: HAKQPAIAPSPPVVEVPSMRQSA*AHRGPI
Trigger: GATGGGGCCGCGGTGCGCCCAGGCGCTCTGGCGCAT...GGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCCTGGCTGCCTCCCGATaGCCGGGGGAGAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GTCQTAGDRTQPTCRGGPLAASR*PGESGL
Trigger: CAGCCCACTCTCCCCCGGTCATCGGGAGGCAGCCAG...GGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp TGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCCAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCG +
Preference number: 4 (lower is better)
Translates to: CPALPVGTCQTAGDRTQPQPSTP*SCPALP
Trigger: CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG...GGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PCSCPALPVGTCQTAGDRPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCAGCACCAGCGGGACCTaGTGCTCCGCCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SVQCAAGWESNNTDTVPPSTSGT*CSAAAA
Trigger: GGCGGCAGCGGCGGAGCAGCAGGTCCCGCTGGTGCT...GGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCGCAGCCCCATCCAGATaGCGGGGGAGAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PARHSRWEHAKQPAIAPSAAPSR*RGRRSW
Trigger: CCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGC...GCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCG +
Preference number: 4 (lower is better)
Translates to: PMLLPGTPGGNMPNSRRSQPSTP*SCPALP
Trigger: CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG...CGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 4 (lower is better)
Translates to: PCSCPALPVGTCQTAGDRARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp ATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: MPNSRRSHPAHLSWRSLPGRKHQ*GGGQVQ
Trigger: CTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCC...AGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCCCTCATCGTTGCCTGTaGGGACTTCCCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: CPALPVGTCQTAGDRTQPPHRCL*GLPWVP
Trigger: TGGCACCCAGGGAAGTCCTCACAGGCAACGATGAGG...GGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRWEHAKQPAIAPSPPVVVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...CACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCAGCCCACCTGTCGTaGAGGTCCCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PARHSRWEHAKQPAIAPSPAHLS*RSLPSQ
Trigger: CTGAGAAGGAAGGGACCTCCACGACAGGTGGGCTGG...GCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCACGGGGGAGAGTGGGCTaGGGCGGGCGCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TEPLLWTSRRSMVNQCRARGRVG*GGRTLS
Trigger: GGACAAGGTGCGCCCGCCCCAGCCCACTCTCCCCCG...TGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR TCA 90 bp CCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCGAGGGTGCAGTGAGCTaGGCTGACATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: PARHSRWEHAKQPAIAPSEGAVS*ADIAPL
Trigger: CAGTGGTGCAATGTCAGCTCAGCTCACTGCACCCTC...GCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp CTCTGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCAGCACCAGCGGGACCTaGTGCTCCGCCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LWSVASSNQVGAISEAVASTSGT*CSAAAA
Trigger: GGCGGCAGCGGCGGAGCAGCAGGTCCCGCTGGTGCT...GGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR GCA 90 bp TCCTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGAGCACCAGCGGGACCTaGTGCTCCGCCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLYATEKFWAQNRIRGAVSTSGT*CSAAAA
Trigger: GGCGGCAGCGGCGGAGCAGCAGGTCCCGCTGGTGCT...CACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp ACCACGGCTACATCACGGGCCACCCTGGAAGGGCGGACCGCTGTGAGGGCCGCTGGTCAGAGTGCTGACTaGATACCAGTCGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: TTATSRATLEGRTAVRAAGQSAD*IPVDGR
Trigger: CCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACC...AGCGGCCCTCACAGCGGTCCGCCCTTCCAGGGTGGCCCGTGATGTAGCCGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp GCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTCGCAGCCCCATCCAGATaGCGGGGGAGAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: AKQPAIAPSPPVVEVPSFAAPSR*RGRRSW
Trigger: CCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGC...GAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAAAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GRDGGSPRKLLSGLKREQSTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...TTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ACTGCATACCAGTCGACGGCAGGAAGCACCAGTGAGGAGGGGGCCAGGTCCAGGCAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCG +
Preference number: 4 (lower is better)
Translates to: TAYQSTAGSTSEEGARSRQPSTP*SCPALP
Trigger: CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG...CCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCCGTCGACTGGTATGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp CCTCTGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCATGCGCCAGAGCGCCTaGGCGCACCGCGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: PLVRRFLQSSWCHFRGCRMRQSA*AHRGPI
Trigger: GATGGGGCCGCGGTGCGCCCAGGCGCTCTGGCGCAT...GCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR CCA 90 bp TGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 4 (lower is better)
Translates to: WEHAKQPAIAPSPPVVEVARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...GACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGCTTCAGCTCCCGCAGGGTGGCCAGGTCCACATGCAAGGGGCTGGCCCCGAGCAGCCAAGAGCATTTGTaGCAGGCCTCCCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SFSSRRVARSTCKGLAPSSQEHL*QASQPE
Trigger: CTCTGGCTGGGAGGCCTGCCACAAATGCTCTTGGCT...GCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp GGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAACAGGGAGGCTGGCATTaGGCTTCAGCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRDGGSPRKLLSGLKREQQGGWH*ASAPAG
Trigger: CCCTGCGGGAGCTGAAGCTCAATGCCAGCCTCCCTG...TTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp AGAGTGCTGACTGCATACCAGTCGACGGCAGGAAGCACCAGTGAGGAGGGGGCCAAGGGCGGACCGCTGTaGGGGCCGCTGTGTATGGGA +
Preference number: 4 (lower is better)
Translates to: RVLTAYQSTAGSTSEEGAKGGPL*GPLCMG
Trigger: TCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTT...GGCCCCCTCCTCACTGGTGCTTCCTGCCGTCGACTGGTATGCAGTCAGCACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp GGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCGACCTAGCCCTCCGGAGCACCAGCGGGACCTaGTGCTCCGCCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSQVILAVFVAAGDLALRSTSGT*CSAAAA
Trigger: GGCGGCAGCGGCGGAGCAGCAGGTCCCGCTGGTGCT...CCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp GCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCGTGGCCAGGTCCACATaGAAGGGGCTGGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: ALQSSALQGGKATTRTPSVARST*KGLAPS
Trigger: GCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCAC...GGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGTAGTGGCCAGGTCCACATaGAAGGGGCTGGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: AVDFEALHGKPVPGRHWVVARST*KGLAPS
Trigger: GCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCAC...TACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTGAGGACTTCCCTGGGTaGCATCAGACCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALPVGTCQTAGDRTQPTCEDFPG*HQTRAG
Trigger: GCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC...ACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NQAPHAPARHSRWEHAKQVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...CTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCGGGGGAGAGTGGGCTaGGGCGGGCGCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WSVASSNQVGAISEAVAMRGRVG*GGRTLS
Trigger: GGACAAGGTGCGCCCGCCCCAGCCCACTCTCCCCCG...CATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR CCA 90 bp GCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCATGACCGGGGGAGAGTaGGCTGGGGCGGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: AISEAVAMPTEAFTTGLPMTGGE*AGAGAP
Trigger: AGGTGCGCCCGCCCCAGCCCACTCTCCCCCGGTCAT...GGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR TCA 90 bp GGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGTGATGTGGCCTTCATaGGTGTCGGCCGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GDGAIAVDFEALHGKPVPVMWPS*VSAAGA
Trigger: GGCTCCTGCGGCCGACACTCATGAAGGCCACATCAC...CGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTGCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGACATACTCGCAGCAGGGAGGCTGGCATTaGGCTTCAGCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: VRATRRLPFLLRLLTYSQQGGWH*ASAPAG
Trigger: CCCTGCGGGAGCTGAAGCTCAATGCCAGCCTCCCTG...CTGCGAGTATGTCAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCCCTCATCGTTGCCTGTaGGGACTTCCCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: VRCRVGKQQHGHRPTLNPPHRCL*GLPWVP
Trigger: TGGCACCCAGGGAAGTCCTCACAGGCAACGATGAGG...GGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTCTGGCTGCCTCCCGATaGCCGGGGGAGAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VASSNQVGAISEAVAMPTLAASR*PGESGL
Trigger: CAGCCCACTCTCCCCCGGTCATCGGGAGGCAGCCAG...AGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR TCA 90 bp CTGCACCCCAAAGGTGAGGGGAGTCAGGTCCTCCCACTGGTCCTTGTACGCCACAGGCAGAGAACTGCTTaGACCCGGGAGGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LHPKGEGSQVLPLVLVRHRQRTA*TREAEG
Trigger: ACCCTCCGCCTCCCGGGTTCAAGCAGTTCTCTGCCT...GTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCGTGCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGTTCCTCTGGTTCCCCTaGGCTCACTGCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GEGCVRATRRLPFLLRLLFLWFP*AHCPSF
Trigger: AAAGGAGGGGCAGTGAGCTCAGGGGAACCAGAGGAA...CAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGCACGCAGCCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677342.1
CDS-3UTR GCA 90 bp ACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGTGGCCAGGTCCACATaGAAGGGGCTGGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TPCWERWGQPKKAPQRAEVARST*KGLAPS
Trigger: GCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCAC...TTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp AGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCGTGGCCAGGTCCACATaGAAGGGGCTGGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SSSVQCAAGWESNNTDTVVARST*KGLAPS
Trigger: GCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCAC...GACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTAGTGTGCTCAGGACCTaGCCGATGACCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: RHSRWEHAKQPAIAPSPPSVLRT*PMTSSL
Trigger: CAACGATGAGGTCATCGGGCAGGTCCTGAGCACACT...AGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RHSRWEHAKQPAIAPSPPVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...AGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PVGTCQTAGDRTQPTCRGGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...TCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TPCWERWGQPKKAPQRAESTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...TTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCTCTGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PLVRRFLQSSWCHFRGCRSTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...GCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp GAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAAGACAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCG +
Preference number: 4 (lower is better)
Translates to: ERWGQPKKAPQRAEEGARQPSTP*SCPALP
Trigger: CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG...TCTTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCGGGCGCACCTTGTCCTaGAGGAACAGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: GTCQTAGDRTQPTCRGGPGRTLS*RNSSTF
Trigger: GAATGTGCTGCTGTTCCTGCAGGACAAGGTGCGCCC...GGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp ACCGCCATATGCTGTGAAATCCTCAATGCTCAGCTGGCCTCTGGTCCGTCGCTTGGGAGGGGGCCTGGCTaGCTCCCGATGACCGGGGGA +
Preference number: 4 (lower is better)
Translates to: TAICCEILNAQLASGPSLGRGPG*LPMTGG
Trigger: TCCCCCGGTCATCGGGAGGCAGCCAGGCCCCCTCCC...AAGCGACGGACCAGAGGCCAGCTGAGCATTGAGGATTTCACAGCATATGGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446552.1
CDS-3UTR CCA 90 bp ACCGCCATATGCTGTGAAATCCTCAATGCTCAGCTGGCCTCTGGTCCGTCGCTTATGCGCCAGAGCGCCTaGGCGCACCGCGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: TAICCEILNAQLASGPSLMRQSA*AHRGPI
Trigger: GATGGGGCCGCGGTGCGCCCAGGCGCTCTGGCGCAT...AAGCGACGGACCAGAGGCCAGCTGAGCATTGAGGATTTCACAGCATATGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446552.1
CDS-3UTR CCA 90 bp GAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTATGCGCCAGAGCGCCTaGGCGCACCGCGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: ETLEFMSLTPHSDEPWEAMRQSA*AHRGPI
Trigger: GATGGGGCCGCGGTGCGCCCAGGCGCTCTGGCGCAT...AGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGAAGGGCGGACCGCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTCAGCTCCCGCAGGGTaGCCAGGTCCACATGCAAGG +
Preference number: 4 (lower is better)
Translates to: GRADRCEGRCVWDIFGLESAPAG*PGPHAR
Trigger: CCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTGA...CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GGAGAGGGCTGCGTGCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGCCATCAGACCAGAGCTaGCTGTGTAGGGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: GEGCVRATRRLPFLLRLLPSDQS*LCRAGE
Trigger: TTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGG...CAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGCACGCAGCCCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGCCATCAGACCAGAGCTaGCTGTGTAGGGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: SRWEHAKQPAIAPSPPVVPSDQS*LCRAGE
Trigger: TTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGG...CACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: HAKQPAIAPSPPVVEVPSCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...GGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTCGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: AKQPAIAPSPPVVEVPSFVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...GAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGTAGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AVDFEALHGKPVPGRHWVVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...TACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SRWEHAKQPAIAPSPPVVTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...CACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTCCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 4 (lower is better)
Translates to: AKQPAIAPSPPVVEVPSFQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...GAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGACACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: PVGTCQTAGDRTQPTCRGHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...TCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: CEGRCVWDIFGLECAQDLGRKHQ*GGGQVQ
Trigger: CTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCC...CAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp GGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCAAGTGGTCAGAGTGCTaGCTGCATACCAGTCGACGG +
Preference number: 4 (lower is better)
Translates to: GTCQTAGDRTQPTCRGGPKWSEC*LHTSRR
Trigger: CCGTCGACTGGTATGCAGTCAGCACTCTGACCACTT...GGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGGGAGGCTGGCATTaGGCTTCAGCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLRLTATNPGKLVGLASTQGGWH*ASAPAG
Trigger: CCCTGCGGGAGCTGAAGCTCAATGCCAGCCTCCCTG...CGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTCCTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTAAGGGCGGACCGCTGTaGGGGCCGCTGTGTATGGGA +
Preference number: 4 (lower is better)
Translates to: VLVRHREVLGPEQDPGSGKGGPL*GPLCMG
Trigger: TCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTT...ACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp TCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAGGGCGGACCGCTGTaGGGGCCGCTGTGTATGGGA +
Preference number: 4 (lower is better)
Translates to: SCCSRKREALQSSALQGGKGGPL*GPLCMG
Trigger: TCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTT...CCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VGDGAIAVDFEALHGKPVPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...CACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTCAGCTACTCGGGAGGCTaGGGCAGAGAACTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: AKQPAIAPSPPVVEVPSFSYSGG*GRELLE
Trigger: TTCAAGCAGTTCTCTGCCTCAGCCTCCCGAGTAGCT...GAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp GTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCGGTCAGAGTGCTGACTaGATACCAGTCGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: VRCRVGKQQHGHRPTLNPGQSAD*IPVDGR
Trigger: CCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACC...GGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CTGCACCCCAAAGGTGAGGGGAGTCAGGTCCTCCCACTGGTCCTTGTACGCCACAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LHPKGEGSQVLPLVLVRHRRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...GTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp ACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGCAGCCCCATCCAGATaGCGGGGGAGAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TEPLLWTSRRSMVNQCRAAAPSR*RGRRSW
Trigger: CCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGC...TGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAAGAGCAGCCCCATCCAGATaGCGGGGGAGAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ERWGQPKKAPQRAEEGARAAPSR*RGRRSW
Trigger: CCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGC...TCTTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CATCCAGATGCCGGGGGAGAAGAAGCTGGCACAGTCGCTGGCGTAGGAGAACTGCCACATGCAAGGGGCTaGCCCCGAGCTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HPDAGGEEAGTVAGVGELPHARG*PRASPA
Trigger: TGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGG...CAGTTCTCCTACGCCAGCGACTGTGCCAGCTTCTTCTCCCCCGGCATCTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CTGCGTGCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGACATACTCCCACATGCAAGGGGCTaGCCCCGAGCTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRAGHEETTLLAQAADILPHARG*PRASPA
Trigger: TGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGG...GAGTATGTCAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGCACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAAGACCACATGCAAGGGGCTaGCCCCGAGCTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ERWGQPKKAPQRAEEGARPHARG*PRASPA
Trigger: TGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGG...TCTTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: TCQTAGDRTQPTCRGGPFVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...GAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCCACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: CAAGWESNNTDTVPPSTPTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...GGGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: MPNSRRSHPAHLSWRSLPTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...AGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 4 (lower is better)
Translates to: WEHAKQPAIAPSPPVVEVQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...GACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSCPALPVGTCQTAGDRTPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...GGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CTGCACCCCAAAGGTGAGGGGAGTCAGGTCCTCCCACTGGTCCTTGTACGCCACCCAGCCCACCTGTCGTaGAGGTCCCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LHPKGEGSQVLPLVLVRHPAHLS*RSLPSQ
Trigger: CTGAGAAGGAAGGGACCTCCACGACAGGTGGGCTGG...GTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp AACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCAGCCCACCTGTCGTaGAGGTCCCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NQAPHAPARHSRWEHAKQPAHLS*RSLPSQ
Trigger: CTGAGAAGGAAGGGACCTCCACGACAGGTGGGCTGG...CTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGTGGGCGTCAGTGTCATaGGGGGAGGGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CEGRCVWDIFGLECAQDLWASVS*GEGAWL
Trigger: CAGCCAGGCCCCCTCCCCCCATGACACTGACGCCCA...CAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp CGACGGCAGGAAGCACCAGTGAGGAGGGGGCCAGGTCCAGGGCATTCTCTAGGTAAGCCCAGGAACTGCTaGTGGGTCCTGTGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RRQEAPVRRGPGPGHSLGKPRNC*WVLWAF
Trigger: GAAAGCCCACAGGACCCACCAGCAGTTCCTGGGCTT...ACCTAGAGAATGCCCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCCGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CAA 72 bp CTGTTTGGTATACACACTCGCCCAGCCTCCCCTCCCTaGTGGGCAGGACCTTGCTGCTGTTTGGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: LFGIHTRPASPP*WAGPCCCLATG
Trigger: CCCGGTGGCCAAACAGCAGCAAGGTCCTGCCCACAAGGGAGGGGAGGCTGGGCGAGTGTGTATACCAAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp CCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCCACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PCSCPALPVGTCQTAGDRHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp AGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAAGATGGCCTCATCGTTGCCTGTaGGGACTTCCCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RWGQPKKAPQRAEEGARWPHRCL*GLPWVP
Trigger: TGGCACCCAGGGAAGTCCTCACAGGCAACGATGAGG...CCATCTTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAGGACATCTTCGGACTTaGGTGTGCTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: VQCAAGWESNNTDTVPPSGHLRT*VCSGPA
Trigger: GGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCC...TGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCAAAGGGCGGACCGCTGTaGGGGCCGCTGTGTATGGGA +
Preference number: 4 (lower is better)
Translates to: SCPLRLTATNPGKLVGLAKGGPL*GPLCMG
Trigger: TCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTT...TGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PVGTCQTAGDRTQPTCRGAPPLR*KPGSGS
Trigger: ACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGC...TCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CGACGGCAGGAAGCACCAGTGAGGAGGGGGCCAGGTCCAGGGCATTCTCTAGGTACAGCATGCGGGTTATaGGCTCCAATTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RRQEAPVRRGPGPGHSLGTACGL*APIGRE
Trigger: CTCCCTCCCAATTGGAGCTCATAACCCGCATGCTGT...ACCTAGAGAATGCCCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCCGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp GCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGCCCGATGACCGGCACCCGTTGCCTGTaGGGACTTCCCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: AVYGTSSDLSVLRTCPMTGTRCL*GLPWVP
Trigger: TGGCACCCAGGGAAGTCCTCACAGGCAACGGGTGCC...GGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677332.1
CDS-3UTR TCA 90 bp GCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTCTCGTTCATAGGTCAGTaGGAGCCTAAGCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AKQPAIAPSPPVVEVPSFSFIGQ*EPKLPW
Trigger: CCAAGGCAGCTTAGGCTCTCACTGACCTATGAACGA...GAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGGAAAAGGCGCTGTCCTaGTTGTTTCCAAACACACCG +
Preference number: 4 (lower is better)
Translates to: PMLLPGTPGGNMPNSRRSEKALS*LFPNTP
Trigger: CGGTGTGTTTGGAAACAAGCAGGACAGCGCCTTTTC...CGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VRCRVGKQQHGHRPTLNPVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...GGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CTGCACCCCAAAGGTGAGGGGAGTCAGGTCCTCCCACTGGTCCTTGTACGCCACAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LHPKGEGSQVLPLVLVRHSSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...GTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp CGGGCCACCCTGGAAGGGCGGACCGCTGTGAGGGCCGCTGTGTATGGGACATCTGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RATLEGRTAVRAAVYGTSGACSS*CSRKRE
Trigger: TTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC...AGATGTCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTTCCAGGGTGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp GGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GDGAIAVDFEALHGKPVPGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...CGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp AATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTGGGAGGGGGCCTGGCTaGCTCCCGATGACCGGGGGA +
Preference number: 4 (lower is better)
Translates to: NQVGAISEAVAMPTEAFTGRGPG*LPMTGG
Trigger: TCCCCCGGTCATCGGGAGGCAGCCAGGCCCCCTCCC...AGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR CCA 90 bp AGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACATGCAAGGGGCTaGCCCCGAGCTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSSVQCAAGWESNNTDTVPHARG*PRASPA
Trigger: TGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGG...GACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGTCTCAGCTCCCGCAGGGTaGCCAGGTCCACATGCAAGG +
Preference number: 4 (lower is better)
Translates to: LVRHREVLGPEQDPGSGVSAPAG*PGPHAR
Trigger: CCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTGA...GACACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCATGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: VQCAAGWESNNTDTVPPSCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...TGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CGGCACTCCCGGTGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTATAGTGGGGCCCTTGTaGTCATCAAAGCGATCCATG +
Preference number: 4 (lower is better)
Translates to: RHSRWEHAKQPAIAPSPPIVGPL*SSKRSM
Trigger: CATGGATCGCTTTGATGACCACAAGGGCCCCACTAT...AGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 4 (lower is better)
Translates to: SPVRCRVGKQQHGHRPTLQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...GAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAACAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 4 (lower is better)
Translates to: GRDGGSPRKLLSGLKREQQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...TTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGACCAGCCCACCTGTCGTaGAGGTCCCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LGRKQPSTPCSCPALPVGPAHLS*RSLPSQ
Trigger: CTGAGAAGGAAGGGACCTCCACGACAGGTGGGCTGG...TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCATGACCGGGGGAGAGTaGGCTGGGGCGGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: GLASTQNMYTLLGEMGAAMTGGE*AGAGAP
Trigger: AGGTGCGCCCGCCCCAGCCCACTCTCCCCCGGTCAT...GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp CTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGTGGGCGTCAGTGTCATaGGGGGAGGGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPPIKLVPFPRLSPCPLKWASVS*GEGAWL
Trigger: CAGCCAGGCCCCCTCCCCCCATGACACTGACGCCCA...CTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
3UTR CAA 72 bp CAGCTGGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTaGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: QLASGPSLPPIK*VPFPRLSPCPL
Trigger: CAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446552.1
3UTR CAA 72 bp TCTCACTCACTGTGCTCCAGCCACACCAGCTCTTCCTaGAGCTGGCCAAGAGCACACCTCGCCCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: SHSLCSSHTSSS*SWPRAHLAQDP
Trigger: AGGGTCCTGGGCGAGGTGTGCTCTTGGCCAGCTCAAGGAAGAGCTGGTGTGGCTGGAGCACAGTGAGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp AGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACAGTGATGTGGCCTTCATaGGTGTCGGCCGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: REALQSSALQGGKATTRTVMWPS*VSAAGA
Trigger: GGCTCCTGCGGCCGACACTCATGAAGGCCACATCAC...TGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTCCACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AKQPAIAPSPPVVEVPSFHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...GAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GGAGAGGGCTGCGTGCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGCACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GEGCVRATRRLPFLLRLLHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...CAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGCACGCAGCCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp ACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TQNMYTLLGEMGAAQESSGRKHQ*GGGQVQ
Trigger: CTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCC...GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp ATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCATGAAGGGCGGACCGCTGTaGGGGCCGCTGTGTATGGGA +
Preference number: 4 (lower is better)
Translates to: ISEAVAMPTEAFTTGLPMKGGPL*GPLCMG
Trigger: TCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTT...CATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR TCA 90 bp GTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: VRCRVGKQQHGHRPTLNPAPPLR*KPGSGS
Trigger: ACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGC...GGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp AAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: KETTKHPMLLPGTPGGNMGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...CATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp AAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: KQPSTPCSCPALPVGTCQGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...TTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GGAAGGGCGGACCGCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTCGCCATGCCCACTaGAGCGTTTACTACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRADRCEGRCVWDIFGLECRHAH*SVYYRP
Trigger: AGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACA...CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp CATCCAGATGCCGGGGGAGAAGAAGCTGGCACAGTCGCTGGCGTAGGAGAACTGGTCCTTGCAGCCACCTaGAGAAGCAGTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: HPDAGGEEAGTVAGVGELVLAAT*RSSVPT
Trigger: AGTGGGGACACTGCTTCTTCAGGTGGCTGCAAGGAC...CAGTTCTCCTACGCCAGCGACTGTGCCAGCTTCTTCTCCCCCGGCATCTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGTAGTCCTTGCAGCCACCTaGAGAAGCAGTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: AVDFEALHGKPVPGRHWVVLAAT*RSSVPT
Trigger: AGTGGGGACACTGCTTCTTCAGGTGGCTGCAAGGAC...TACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp AAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAGGTCAGAGTGCTGACTaGATACCAGTCGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: KQPSTPCSCPALPVGTCQGQSAD*IPVDGR
Trigger: CCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACC...TTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAGGTCAGAGTGCTGACTaGATACCAGTCGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGRKQPSTPCSCPALPVGGQSAD*IPVDGR
Trigger: CCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACC...TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCGTGGCCAGGTCCACATaGAAGGGGCTGGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TQNMYTLLGEMGAAQESSVARST*KGLAPS
Trigger: GCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCAC...GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ATTTTATTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGCCAGGTCCACATaGAAGGGGCTGGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: ILLGRKQPSTPCSCPALPVARST*KGLAPS
Trigger: GCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCAC...CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGGAGGACTTCCCTGGGTaGCATCAGACCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PLRLTATNPGKLVGLASTEDFPG*HQTRAG
Trigger: GCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC...CGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGAGTGTGCTCAGGACCTaGCCGATGACCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: VGRDGGSPRKLLSGLKRESVLRT*PMTSSL
Trigger: CAACGATGAGGTCATCGGGCAGGTCCTGAGCACACT...CTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGAGTGTGCTCAGGACCTaGCCGATGACCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: GDGAIAVDFEALHGKPVPSVLRT*PMTSSL
Trigger: CAACGATGAGGTCATCGGGCAGGTCCTGAGCACACT...CGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VGRDGGSPRKLLSGLKREVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...CTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: TPCWERWGQPKKAPQRAERRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...TTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CGACGGCAGGAAGCACCAGTGAGGAGGGGGCCAGGTCCAGGGCATTCTCTAGGTTTCAGTCCAGTGCGCTaGAGGGTGGGAAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: RRQEAPVRRGPGPGHSLGFSPVR*RVGKQQ
Trigger: TTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAA...ACCTAGAGAATGCCCTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCCGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp ATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTTCAGTCCAGTGCGCTaGAGGGTGGGAAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: MPNSRRSHPAHLSWRSLPFSPVR*RVGKQQ
Trigger: TTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAA...AGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: ALQSSALQGGKATTRTPSGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...GGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGCTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 4 (lower is better)
Translates to: CEGRCVWDIFGLECAQDLLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...CAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp CTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCAAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LAQGHTIWVKEIVGPLWSSTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...TGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TGCAGTTCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGCAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCG +
Preference number: 4 (lower is better)
Translates to: CSSCCSRKREALQSSALQQPSTP*SCPALP
Trigger: CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG...CTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCTTCTCTCACTCACTGTaGTCCAGCCACACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VRCRVGKQQHGHRPTLNPFSHSL*SSHTSS
Trigger: AGAGCTGGTGTGGCTGGAGCACAGTGAGTGAGAGAA...GGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp GTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCACACCTCCCTTGTCCTaGAGGAACAGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: VRCRVGKQQHGHRPTLNPTPPLS*RNSSTF
Trigger: GAATGTGCTGCTGTTCCTGCAGGACAAGGGAGGTGT...GGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677332.1
CDS-3UTR CCA 90 bp TCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTAATGCGCCAGAGCGCCTaGGCGCACCGCGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: STLPNSGSPITLRREHLLMRQSA*AHRGPI
Trigger: GATGGGGCCGCGGTGCGCCCAGGCGCTCTGGCGCAT...TAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCACATGCAAGGGGCTaGCCCCGAGCTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GAISEAVAMPTEAFTTGLPHARG*PRASPA
Trigger: TGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGG...AAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp TGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTTCAGCTCCCGCAGGGTaGCCAGGTCCACATGCAAGG +
Preference number: 4 (lower is better)
Translates to: CPLRLTATNPGKLVGLASSAPAG*PGPHAR
Trigger: CCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTGA...AGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: SPVRCRVGKQQHGHRPTLEGRCV*DIFGLE
Trigger: CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTC...GAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGTATGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: AVDFEALHGKPVPGRHWVCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...TACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LLWTSRRSMVNQCRADTGCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...CCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: VGRDGGSPRKLLSGLKREATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...CTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: EPLLWTSRRSMVNQCRADVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...GTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGAGCTGGCACAGTCGCTaGCGTAGGAGAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PLRLTATNPGKLVGLASTSWHSR*RRRTAP
Trigger: GGGAGCAGTTCTCCTACGCCAGCGACTGTGCCAGCT...CGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TEPLLWTSRRSMVNQCRAEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...TGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CACATGCAAGGGGCTGGCCCCGAGCTTCTCCTGCAGGTAAGTGGTCAGAGTGCTCACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: HMQGAGPELLLQVSGQSAHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...AGCACTCTGACCACTTACCTGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp CCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGTCATTGTAACGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 4 (lower is better)
Translates to: PQRSFGPRTGSGERCHCNARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...GTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAAAGGTGAGGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 4 (lower is better)
Translates to: GVIPEGASQVEFLHPKGEARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...CTCACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp ACTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCTGGGCGTCAGTGTCATaGGGGGAGGGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGTGSHNLGQRNSGALVVWASVS*GEGAWL
Trigger: CAGCCAGGCCCCCTCCCCCCATGACACTGACGCCCA...GACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp ACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAAAGGCAGTCATGGGGTaGGGAGATCTGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TEPLLWTSRRSMVNQCRAKAVMG*GDLQAA
Trigger: AGCTGCCTGCAGATCTCCCCACCCCATGACTGCCTT...TGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp CTGGAAGGGCGGACCGCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGCTCCACGCCTGCTTTTaGGGCAAAGATCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LEGRTAVRAAVYGTSSDLLHACF*GKDPGW
Trigger: CCATCCAGGATCTTTGCCCCAAAAGCAGGCGTGGAG...CAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR CCA 90 bp GCAGGGTGGCCAGGTCCACATGCAAGGGGCTGGCCCCGAGCTTCTCCTGCAGGTCTTAGAGTCATCTCATaGTCTCCACGCCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: AGWPGPHARGWPRASPAGLRVIS*SPRLLL
Trigger: CAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAG...ACCTGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR CCA 90 bp GCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCCTGAGGGTGGGGGCTTaGGTTCTTCTGCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: AISEAVAMPTEAFTTGLPLRVGA*VLLLTA
Trigger: GGCAGTGAGCAGAAGAACCCAAGCCCCCACCCTCAG...GGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR CCA 90 bp AACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAAGACCTTGCTGCTGTTTaGCCACCGGGGTTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: NNQAPHAPARHSRWEHAKDLAAV*PPGFSV
Trigger: GACTGAGAACCCCGGTGGCCAAACAGCAGCAAGGTC...TTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR CCA 90 bp GAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACCTCTTAGGACCACAGTaGCCCCGACCCCATCCCTTT +
Preference number: 4 (lower is better)
Translates to: EPLLWTSRRSMVNQCRADLLGPQ*PRPHPF
Trigger: AAAGGGATGGGGTCGGGGCCACTGTGGTCCTAAGAG...GTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
3UTR CAA 72 bp GAACTGGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTaGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: ELASGPSLPPIK*VPFPRLSPCPL
Trigger: CAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439372.6
3UTR CAA 72 bp GCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTaGAGTGTGCTCAGGACCTGCCCGATGACCTCATCG +
Preference number: 4 (lower is better)
Translates to: AVRAAVYGTSSD*SVLRTCPMTSS
Trigger: CGATGAGGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR CAA 72 bp TACCTGGCCTCTGGTCCGTCGCTTCCTCCAATCAAGTaGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: YLASGPSLPPIK*VPFPRLSPCPL
Trigger: CAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGGCCAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp GCTGTGAAATCCTCAATGCTCAGCTGGCCTCTGGTCCGTCGCTTCCTCCAATCAGTGATGTGGCCTTCATaGGTGTCGGCCGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AVKSSMLSWPLVRRFLQSVMWPS*VSAAGA
Trigger: GGCTCCTGCGGCCGACACTCATGAAGGCCACATCAC...TGATTGGAGGAAGCGACGGACCAGAGGCCAGCTGAGCATTGAGGATTTCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446552.1
CDS-3UTR TCA 90 bp AAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGGCTGCAAGTCGCTGGTaGTGTGGCCTTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: KETTKHPMLLPGTPGGNMAASRW*CGLHEC
Trigger: ACACTCATGAAGGCCACATCACCAGCGACTTGCAGC...CATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TGGGAACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WEHAKQPAIAPSPPVVEVHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...GACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: STQNMYTLLGEMGAAQESGRKHQ*GGGQVQ
Trigger: CTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCC...GCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GAGTCATCTCATGGTCTCCACGCCTGCTTTTGGGGCAAAGATCCTGGATGGGAACAGGGAGGCTGGCATTaGGCTTCAGCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ESSHGLHACFWGKDPGWEQGGWH*ASAPAG
Trigger: CCCTGCGGGAGCTGAAGCTCAATGCCAGCCTCCCTG...TTCCCATCCAGGATCTTTGCCCCAAAAGCAGGCGTGGAGACCATGAGATGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp AGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCTCATCGTTGCCTGTaGGGACTTCCCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: REALQSSALQGGKATTRTPHRCL*GLPWVP
Trigger: TGGCACCCAGGGAAGTCCTCACAGGCAACGATGAGG...TGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CTGGGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCGGACATCTTCGGACTTaGGTGTGCTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: LGSIEVGDGAIAVDFEALGHLRT*VCSGPA
Trigger: GGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCC...GAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp AGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCGGACATCTTCGGACTTaGGTGTGCTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: SSSVQCAAGWESNNTDTVGHLRT*VCSGPA
Trigger: GGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCC...GACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp AGGGGAGCTTGCAGTTCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGACSSCCSRKREALQSSPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...ACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GGCAGACACTGGGTAGAGGCGGTTGGCCAGAATGAACTTGAATGTCACTGTGGTCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GRHWVEAVGQNELECHCGPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...ACCACAGTGACATTCAAGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GLASTQNMYTLLGEMGAAPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GGAGGATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCGACCTAGCCCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGWITGDTGCFCSSWRPSPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...GCTAGGTCGCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp CTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCACCTGCACCCCAAAGGTaGGGGGAGTCAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LAQGHTIWVKEIVGPLWSPAPQR*GESGPP
Trigger: GGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAGG...TGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VGDGAIAVDFEALHGKPVRSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...CACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGTCAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LVRHREVLGPEQDPGSGVRSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...GACACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp ACCGCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: TAVRAAVYGTSSDLSVLRGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...CCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp TGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAACCCCCATGCTCAGCTTGTCCTaGAGGAACAGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: CAAGWESNNTDTVPPSTPMLSLS*RNSSTF
Trigger: GAATGTGCTGCTGTTCCTGCAGGACAAGCTGAGCAT...GGGGGTTGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369762.7
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTGAGGACTTCCCTGGGTaGCATCAGACCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CPLRLTATNPGKLVGLASEDFPG*HQTRAG
Trigger: GCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC...AGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAAGTGTGCTCAGGACCTaGCCGATGACCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: LGRKQPSTPCSCPALPVGSVLRT*PMTSSL
Trigger: CAACGATGAGGTCATCGGGCAGGTCCTGAGCACACT...TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCATGAGACGAAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: EAVAMPTEAFTTGLPMRRRRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...TCGTCTCATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp GAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: EEGSSSVQCAAGWESNNTRRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...CGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp AGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACAGCAGCCCCATCCAGATaGCGGGGGAGAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RKREALQSSALQGGKATTAAPSR*RGRRSW
Trigger: CCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGC...TGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCATGGCAGCCCCATCCAGATaGCGGGGGAGAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ISEAVAMPTEAFTTGLPMAAPSR*RGRRSW
Trigger: CCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGC...CATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp AGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCAGGAGTCAGCCGCCTTaGCCACCCTACAGACAAGAG +
Preference number: 4 (lower is better)
Translates to: SSSVQCAAGWESNNTDTVRSQPP*PPYRQE
Trigger: CTCTTGTCTGTAGGGTGGGCAAGGCGGCTGACTCCT...GACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp TCCTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGAGGAGTCAGCCGCCTTaGCCACCCTACAGACAAGAG +
Preference number: 4 (lower is better)
Translates to: SLYATEKFWAQNRIRGAVRSQPP*PPYRQE
Trigger: CTCTTGTCTGTAGGGTGGGCAAGGCGGCTGACTCCT...CACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp CTGGGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCTGGGGTGGGGAGATCTaGAGGCAGCTGACTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LGSIEVGDGAIAVDFEALWGGEI*RQLTCG
Trigger: ACCACAAGTCAGCTGCCTGCAGATCTCCCCACCCCA...GAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp GCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGTATTAGGGTCACTAAGGTaGCTGGGCTGGGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: AVDFEALHGKPVPGRHWVLGSLR*LGWAGK
Trigger: TTTGCCAGCCCAGCCCAGGCACCTTAGTGACCCTAA...TACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677342.1
CDS-3UTR CCA 90 bp TGCAGTTCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGTCAGCTCCCGCAGGGTaGCCAGGTCCACATGCAAGG +
Preference number: 4 (lower is better)
Translates to: CSSCCSRKREALQSSALQSAPAG*PGPHAR
Trigger: CCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTGA...CTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGTAGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: AVDFEALHGKPVPGRHWVEGRCV*DIFGLE
Trigger: CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTC...TACCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: KQPSTPCSCPALPVGTCQATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...TTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGCCGGGGGAGAAGAAGCTGGCACAGTCGCTGGCGTAGGAGAACTGCTCCCCCAAGGTCAGTGAGAGCCTaGCAAAGGAGTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: CRGRRSWHSRWRRRTAPPRSVRA*QRSHSR
Trigger: TCTGGAATGACTCCTTTGCCAGGCTCTCACTGACCT...TGGGGGAGCAGTTCTCCTACGCCAGCGACTGTGCCAGCTTCTTCTCCCCCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GGATCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATCACAGGTGATAGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSGERCHCNSQEDGSQVIVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...TATCACCTGTGATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EIVGPLWSSKRSMVLRLRVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...CCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GTCCTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VLVRHREVLGPEQDPGSGTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...ACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp ACCGCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: TAVRAAVYGTSSDLSVLRTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...CCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCATGAGACGAAGCTGGCACAGTCGCTaGCGTAGGAGAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: EAVAMPTEAFTTGLPMRRSWHSR*RRRTAP
Trigger: GGGAGCAGTTCTCCTACGCCAGCGACTGTGCCAGCT...TCGTCTCATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp CCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PLRLTATNPGKLVGLASTEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...CGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: ALQSSALQGGKATTRTPSPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...GGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGCTATCTTAGAGTCATCTCATGGTCTCCACGCCTGCTTTTGGGGCAAAGATCCATGACCGGGGGAGAGTaGGCTGGGGCGGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: CYLRVISWSPRLLLGQRSMTGGE*AGAGAP
Trigger: AGGTGCGCCCGCCCCAGCCCACTCTCCCCCGGTCAT...GGATCTTTGCCCCAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAGATAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR CCA 90 bp TCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGGCTTCCCTTGGGGAATaGGCGTCAGTGTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SLPPIKLVPFPRLSPCPLASLGE*ASVSWG
Trigger: CCCCCATGACACTGACGCCCATTCCCCAAGGGAAGC...CAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR TCA 90 bp TCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGGCTGCAAGTCGCTGGTaGTGTGGCCTTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: SCCSRKREALQSSALQGGAASRW*CGLHEC
Trigger: ACACTCATGAAGGCCACATCACCAGCGACTTGCAGC...CCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TCCTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGGCTGCAAGTCGCTGGTaGTGTGGCCTTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLYATEKFWAQNRIRGAVAASRW*CGLHEC
Trigger: ACACTCATGAAGGCCACATCACCAGCGACTTGCAGC...CACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
CDS-3UTR TCA 90 bp GTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGGCTGCAAGTCGCTGGTaGTGTGGCCTTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: VGDGAIAVDFEALHGKPVAASRW*CGLHEC
Trigger: ACACTCATGAAGGCCACATCACCAGCGACTTGCAGC...CACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VGLASTQNMYTLLGEMGAGRKHQ*GGGQVQ
Trigger: CTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCC...TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTAGGAGAACTGCTCCCCCATTACGTTGAAAGCCTGGATCTGGAAGTCCTGAAGCAGGGAGGCTGGCATTaGGCTTCAGCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: VGELLPHYVESLDLEVLKQGGWH*ASAPAG
Trigger: CCCTGCGGGAGCTGAAGCTCAATGCCAGCCTCCCTG...CTTCAGGACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGCAGTTCTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTAAGGGCGGACCGCTGTaGGGGCCGCTGTGTATGGGA +
Preference number: 4 (lower is better)
Translates to: LSWRSLPSQATEINPCTSKGGPL*GPLCMG
Trigger: TCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTT...AGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCAAGGGCGGACCGCTGTaGGGGCCGCTGTGTATGGGA +
Preference number: 4 (lower is better)
Translates to: STQNMYTLLGEMGAAQESKGGPL*GPLCMG
Trigger: TCCCATACACAGCGGCCCTCACAGCGGTCCGCCCTT...GCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGAGCAAGATCGTTCATAGGTCAGTaGGAGCCTGGCAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ERWGQPKKAPQRAEEGARSFIGQ*EPGKGV
Trigger: GACTCCTTTGCCAGGCTCTCACTGACCTATGAACGA...TCTTGCTCCCTCTTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
CDS-3UTR TCA 90 bp AACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAAGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: NNQAPHAPARHSRWEHAKAPPLR*KPGSGS
Trigger: ACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGC...TTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: CEGRCVWDIFGLECAQDLGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...CAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp GCGGGCCACGAGGAGACTACCCTTCTTGCTCAGGCTGCTGACATACTCGCAGTGTTGGGACAAGGTCACTaGAGCTTCCCTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: AGHEETTLLAQAADILAVLGQGH*SFPWGM
Trigger: CATTCCCCAAGGGAAGCTTCAGTGACCTTGTCCCAA...CACTGCGAGTATGTCAGCAGCCTGAGCAAGAAGGGTAGTCTCCTCGTGGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR TCA 90 bp GTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCTGTCGCCATGCCCACTaGAGCGTTTACTACAGGCCT +
Preference number: 4 (lower is better)
Translates to: VRRFLQSSWCHFRGCRHACRHAH*SVYYRP
Trigger: AGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACA...GGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR TCA 90 bp GGCCCAGAACAGGATCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATAGAATGTCAGCTTCCTaGGGGTGGGGGCTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GPEQDPGSGVIVTHRRMDRMSAS*GWGLGF
Trigger: GAACCCAAGCCCCCACCCTCAGGAAGCTGACATTCT...ATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp GCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCTTCTTCCCAGTTAGGCCCTaGGGAGATTTTAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: AKQPAIAPSPPVVEVPSFFPVRP*GDFNQL
Trigger: AAGCTGATTAAAATCTCCTCAGGGCCTAACTGGGAA...GAAGGAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp GTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCCACCCTCAGAAAAGGCGCTGTCCTaGTTGTTTCCAAACACACCG +
Preference number: 4 (lower is better)
Translates to: VQCAAGWESNNTDTVPPSEKALS*LFPNTP
Trigger: CGGTGTGTTTGGAAACAAGCAGGACAGCGCCTTTTC...TGAGGGTGGGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGTCATTGTAACGAGGACTTCCCTGGGTaGCATCAGACCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PQRSFGPRTGSGERCHCNEDFPG*HQTRAG
Trigger: GCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC...GTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp ACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: TLEFMSLTPHSDEPWEAGRRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...ACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACTTCAGTCCAGTGCGCTaGAGGGTGGGAAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: EPLLWTSRRSMVNQCRADFSPVR*RVGKQQ
Trigger: TTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAA...GTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCAGTGCCGGGCAGACACTGGGTAGAGGCGGTTGGCCAGAATGAACTTGAATGTAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PVPGRHWVEAVGQNELECSSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...ACATTCAAGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCCTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 4 (lower is better)
Translates to: TQNMYTLLGEMGAAQESSLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp AGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATCTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 4 (lower is better)
Translates to: SGALVVIKAIHGLEAEDHLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...ATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp AACTCACAGGAGGATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NSQEDGSQVILAVFVAAGSTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...GCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATCCTCCTGTGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp AGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACAGGAAAGCCCAGGAACTaGTGGTGGGTCCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RKREALQSSALQGGKATTGKPRN*WWVLWA
Trigger: AGCCCACAGGACCCACCAGCAGTTCCTGGGCTTTCC...TGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp GAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTTGGGCAGGACCTTGCTaGTGTTTGGCCACCGGGGTT +
Preference number: 4 (lower is better)
Translates to: ETLEFMSLTPHSDEPWEAWAGPC*CLATGV
Trigger: AACCCCGGTGGCCAAACAGCAGCAAGGTCCTGCCCA...AGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp GGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAAAGGTGAGTTGTGGGCAGGACCTTaGTGCTGTTTGGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: GVIPEGASQVEFLHPKGELWAGP*CCLATG
Trigger: CCCGGTGGCCAAACAGCAGCAAGGTCCTGCCCACAA...CTCACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR CCA 90 bp TCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCACCATCAGACCAGAGCTaGCTGTGTAGGGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: SCPLRLTATNPGKLVGLAPSDQS*LCRAGE
Trigger: TTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGG...TGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGCGGGCTGAAGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: TPCWERWGQPKKAPQRAEEGRCV*DIFGLE
Trigger: CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTC...TTCAGCCCGCTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: EEGSSSVQCAAGWESNNTCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...CGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: GSIEVGDGAIAVDFEALHVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...ATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACAACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: REALQSSALQGGKATTRTTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...TGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTAGCTGGCACAGTCGCTaGCGTAGGAGAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ETLEFMSLTPHSDEPWEASWHSR*RRRTAP
Trigger: GGGAGCAGTTCTCCTACGCCAGCGACTGTGCCAGCT...AGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CTGCACCCCAAAGGTGAGGGGAGTCAGGTCCTCCCACTGGTCCTTGTACGCCACATAGTGGGGCCCTTGTaGTCATCAAAGCGATCCATG +
Preference number: 4 (lower is better)
Translates to: LHPKGEGSQVLPLVLVRHIVGPL*SSKRSM
Trigger: CATGGATCGCTTTGATGACCACAAGGGCCCCACTAT...GTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCCCTCACCTTTGGGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp ACATGCCAAACAGCCGGCGATCGCACCCAGCCCACCTGTCGTGGAGGTCCCTTCCAGGGTCACACAATCTaGGTCAAAGAAATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TCQTAGDRTQPTCRGGPFQGHTI*VKEIVG
Trigger: CCCCACTATTTCTTTGACCCAGATTGTGTGACCCTG...GAAGGGACCTCCACGACAGGTGGGCTGGGTGCGATCGCCGGCTGTTTGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 4 (lower is better)
Translates to: REALQSSALQGGKATTRTQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...TGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCAGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SCPLRLTATNPGKLVGLAEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...TGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAAATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: NNQAPHAPARHSRWEHAKICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...TTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 4 (lower is better)
Translates to: KETTKHPMLLPGTPGGNMPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...CATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGACCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGRKQPSTPCSCPALPVGPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 4 (lower is better)
Translates to: TATNPGKLVGLASTQNMYARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...GTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
3UTR CAA 72 bp CCAAAGGTGAGGGGAGTCAGGTCCTCCCACTGGTCCTaGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: PKVRGVRSSHWS*YATEKFWAQNR
Trigger: CCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCCCTCACCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
3UTR CAA 72 bp GCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTaGAGTGTGCTCAGGACCTGCCCGATGACCTCATCT +
Preference number: 4 (lower is better)
Translates to: AVRAAVYGTSSD*SVLRTCPMTSS
Trigger: AGATGAGGTCATCGGGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677332.1
CDS-3UTR TCA 90 bp AGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAGTGATGTGGCCTTCATaGGTGTCGGCCGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SIYAEYVHLVGRDGGSPRVMWPS*VSAAGA
Trigger: GGCTCCTGCGGCCGACACTCATGAAGGCCACATCAC...TCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCATGAGAGCTGCAAGTCGCTGGTaGTGTGGCCTTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: SEAVAMPTEAFTTGLPMRAASRW*CGLHEC
Trigger: ACACTCATGAAGGCCACATCACCAGCGACTTGCAGC...TCTCATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR TCA 90 bp AGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RIHVPYASQRRTLGSWLVGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...GACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp ACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCCTACAGGCCTTCCCATaGGACGACCCACACCTCCCT +
Preference number: 4 (lower is better)
Translates to: TQNMYTLLGEMGAAQESSLQAFP*DDPHLP
Trigger: AGGGAGGTGTGGGTCGTCTCATGGGAAGGCCTGTAG...GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp TCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATCACAGGTGATACTGCTACAGGCCTTCCCATaGGACGACCCACACCTCCCT +
Preference number: 4 (lower is better)
Translates to: SGERCHCNSQEDGSQVILLQAFP*DDPHLP
Trigger: AGGGAGGTGTGGGTCGTCTCATGGGAAGGCCTGTAG...CAGTATCACCTGTGATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp GCAGTGGAAGGAGTAGATGCTGGGCCCTGTGACCTGGGAAGCATTGAAGTAGGCTGTCGCCATGCCCACTaGAGCGTTTACTACAGGCCT +
Preference number: 4 (lower is better)
Translates to: AVEGVDAGPCDLGSIEVGCRHAH*SVYYRP
Trigger: AGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACA...GCCTACTTCAATGCTTCCCAGGTCACAGGGCCCAGCATCTACTCCTTCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp GCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCATGAGACGACCCAGATCTGCAGGCAGCTaGCTTGTGGTAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: AVAMPTEAFTTGLPMRRPRSAGS*LVVTQE
Trigger: CTCCTGAGTTACCACAAGTCAGCTGCCTGCAGATCT...GGGTCGTCTCATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR TCA 90 bp ACCGCTGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGAGACTACAAGGGCAATaGGCCATACAGGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: TAVRAAVYGTSSDLSVLRRLQGQ*AIQATN
Trigger: GTTGGTGGCCTGTATGGCTCATTGCCCTTGTAGTCT...CCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACAGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp ACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTGGTCAGAGTGCTGACTaGATACCAGTCGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLEFMSLTPHSDEPWEAGGQSAD*IPVDGR
Trigger: CCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACC...ACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp AGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGAGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RGKLFSPVRCRVGKQQHGVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...TCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTAAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PIKLVPFPRLSPCPLKRLRRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...TAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp TGTGACCTGGGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: CDLGSIEVGDGAIAVDFESSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...CTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCCCAGGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LGRKQPSTPCSCPALPVGACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACCTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 4 (lower is better)
Translates to: TATNPGKLVGLASTQNMYLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...GTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTTCAACCAAGCACCCCATaGTCCTGCCCGGCACTCCCG +
Preference number: 4 (lower is better)
Translates to: DEPWEAGWSSIYAEYVHLQPSTP*SCPALP
Trigger: CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTG...AAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGGGGCGCACCTTGTCCTaGAGGAACAGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: LPPIKLVPFPRLSPCPLKGRTLS*RNSSTF
Trigger: GAATGTGCTGCTGTTCCTGCAGGACAAGGTGCGCCC...CTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR GCA 90 bp TTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCAGTGCCGGGCAGACACTGGGAGGATCCAGTCACATTaGAAGGTCGGAACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLWTSRRSMVNQCRADTGRIQSH*KVGTEL
Trigger: CAGCTCTGTTCCGACCTTGCAATGTGACTGGATCCT...CCCAGTGTCTGCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677342.1
CDS-3UTR CCA 90 bp TACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCCACATGCAAGGGGCTaGCCCCGAGCTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: YAEYVHLVGRDGGSPRKLPHARG*PRASPA
Trigger: TGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGG...GAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTCAGCTCCCGCAGGGTaGCCAGGTCCACATGCAAGG +
Preference number: 4 (lower is better)
Translates to: LSWRSLPSQATEINPCTSSAPAG*PGPHAR
Trigger: CCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTGA...AGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TLEFMSLTPHSDEPWEAGCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...ACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: VASSNQVGAISEAVAMPTATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...AGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp AGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGAGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: RGKLFSPVRCRVGKQQHGATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...TCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: IWVKEIVGPLWSSKRSMVVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...GACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTCTTTGACCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGAGCTTGCAGTTCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTGCGACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GACSSCCSRKREALQSSATEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...CGCACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATAGCTGGCACAGTCGCTaGCGTAGGAGAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGALVVIKAIHGLEAEDHSWHSR*RRRTAP
Trigger: GGGAGCAGTTCTCCTACGCCAGCGACTGTGCCAGCT...ATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GAGAAAGGAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGAGCTGGCACAGTCGCTaGCGTAGGAGAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: EKGDPRIHVPYASQRRTLSWHSR*RRRTAP
Trigger: GGGAGCAGTTCTCCTACGCCAGCGACTGTGCCAGCT...CAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTCCTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAACATGCCAAAATAGTGGGGCCCTTGTaGTCATCAAAGCGATCCATG +
Preference number: 4 (lower is better)
Translates to: NNQAPHAPARHSRWEHAKIVGPL*SSKRSM
Trigger: CATGGATCGCTTTGATGACCACAAGGGCCCCACTAT...TTTGGCATGTTCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRLTATNPGKLVGLASTQPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...CTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CCTCTGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PLVRRFLQSSWCHFRGCRICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...GCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp AGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SSSVQCAAGWESNNTDTVICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...GACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: RKREALQSSALQGGKATTHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...TGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATGCTTCCCTTGGGGAATaGGCGTCAGTGTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SGALVVIKAIHGLEAEDHASLGE*ASVSWG
Trigger: CCCCCATGACACTGACGCCCATTCCCCAAGGGAAGC...ATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp GATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCGACCTAGCCCTCGCTTCCCTTGGGGAATaGGCGTCAGTGTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: DGSQVILAVFVAAGDLALASLGE*ASVSWG
Trigger: CCCCCATGACACTGACGCCCATTCCCCAAGGGAAGC...GAGGGCTAGGTCGCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp GCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACACGGACACCGTCCACACCTCCCTACAGTTaGGACAAGGTCACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ALQSSALQGGKATTRTPSTPPYS*DKVTEA
Trigger: AGCTTCAGTGACCTTGTCCCAACTGTAGGGAGGTGT...GGACGGTGTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp TGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGAGAGGAACTGGCCTCTaGTCCGTCGCTTCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: WSVASSNQVGAISEAVAMRGTGL*SVASSN
Trigger: ATTGGAGGAAGCGACGGACCAGAGGCCAGTTCCTCT...CATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439372.6
CDS-3UTR CCA 90 bp ATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCATGCATGGAAGGCAGTCATaGGGTGGGGAGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ISEAVAMPTEAFTTGLPMHGRQS*GGEICR
Trigger: CCTGCAGATCTCCCCACCCCATGACTGCCTTCCATG...CATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
3UTR CAA 72 bp CTGGCAAAGGAGTCATTCCAGAAGGAGCCAGTCAGGTaGAGTTCCTGCACCCCAAAGGTGAGGGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LAKESFQKEPVR*SSCTPKVRGVR
Trigger: CCTGACTCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCCTTTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp AACTCACAGGAGGATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCGTGATGTGGCCTTCATaGGTGTCGGCCGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: NSQEDGSQVILAVFVAAGVMWPS*VSAAGA
Trigger: GGCTCCTGCGGCCGACACTCATGAAGGCCACATCAC...GCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATCCTCCTGTGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
CDS-3UTR TCA 90 bp AGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGCTGCAAGTCGCTGGTaGTGTGGCCTTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: SFGPRTGSGERCHCNSQEAASRW*CGLHEC
Trigger: ACACTCATGAAGGCCACATCACCAGCGACTTGCAGC...CTCCTGTGAGTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
CDS-3UTR TCA 90 bp AAAGGTGAGGGGAGTCAGGTCCTCCCACTGGTCCTTGTACGCCACAGAGAAGTTAAGTGGTCAGAGTGCTaGCTGCATACCAGTCGACGG +
Preference number: 4 (lower is better)
Translates to: KGEGSQVLPLVLVRHREVKWSEC*LHTSRR
Trigger: CCGTCGACTGGTATGCAGTCAGCACTCTGACCACTT...AACTTCTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGACTCCCCTCACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp CTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTCCTCATCGTTGCCTGTaGGGACTTCCCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LSWRSLPSQATEINPCTSPHRCL*GLPWVP
Trigger: TGGCACCCAGGGAAGTCCTCACAGGCAACGATGAGG...AGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp ATTTTATTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGGACATCTTCGGACTTaGGTGTGCTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: ILLGRKQPSTPCSCPALPGHLRT*VCSGPA
Trigger: GGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCC...CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGGGACATCTTCGGACTTaGGTGTGCTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: EIVGPLWSSKRSMVLRLRGHLRT*VCSGPA
Trigger: GGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCC...CCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCCATGGTAAACCATCGTTCATAGGTCAGTaGGAGCCTGGCAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: EVGDGAIAVDFEALHGKPSFIGQ*EPGKGV
Trigger: GACTCCTTTGCCAGGCTCTCACTGACCTATGAACGA...TGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp TGTGAGGGCCGCTGTGTATGGGACATCTTCGGACTTGAGTGTGCTCAGGACCTGGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: CEGRCVWDIFGLECAQDLAPPLR*KPGSGS
Trigger: ACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGC...CAGGTCCTGAGCACACTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp GCAGTGGAAGGAGTAGATGCTGGGCCCTGTGACCTGGGAAGCATTGAAGTAGGCGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: AVEGVDAGPCDLGSIEVGAPPLR*KPGSGS
Trigger: ACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGC...GCCTACTTCAATGCTTCCCAGGTCACAGGGCCCAGCATCTACTCCTTCCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: EIVGPLWSSKRSMVLRLRGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...CCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp AGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACATGTCGCCATGCCCACTaGAGCGTTTACTACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RKREALQSSALQGGKATTCRHAH*SVYYRP
Trigger: AGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACA...TGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp GGCCCAGAACAGGATCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATTGCAGTGAGCTGAGCTaGCATTGCACCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: GPEQDPGSGVIVTHRRMDCSELS*HCTTAF
Trigger: GAATGCAGTGGTGCAATGTCAGCTCAGCTCACTGCA...ATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp CCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGATGCTCAGCTTGTCCTaGAGGAACAGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: PLRLTATNPGKLVGLASTMLSLS*RNSSTF
Trigger: GAATGTGCTGCTGTTCCTGCAGGACAAGCTGAGCAT...CGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369762.7
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GTAGGAGAACTGCTCCCCCATTACGTTGAAAGCCTGGATCTGGAAGTCCTGAAGGAGGACTTCCCTGGGTaGCATCAGACCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VGELLPHYVESLDLEVLKEDFPG*HQTRAG
Trigger: GCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC...CTTCAGGACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGCAGTTCTCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTAGTGTGCTCAGGACCTaGCCGATGACCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: TLEFMSLTPHSDEPWEAGSVLRT*PMTSSL
Trigger: CAACGATGAGGTCATCGGGCAGGTCCTGAGCACACT...ACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ETLEFMSLTPHSDEPWEAVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...AGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTACAGCAGCCCCATCCAGATaGCGGGGGAGAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: HTPKLREPYNLKEGAFATAAPSR*RGRRSW
Trigger: CCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGC...TGTAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GAGAAAGGAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGAGCTCTTCAGTCCAGTaGGCTGCAGGGTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: EKGDPRIHVPYASQRRTLSSSVQ*AAGWES
Trigger: GCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCT...CAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTCCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CTGGGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCGCTCGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LGSIEVGDGAIAVDFEALGACSS*CSRKRE
Trigger: TTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC...GAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GLASTQNMYTLLGEMGAAGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGACTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 4 (lower is better)
Translates to: PGKLVGLASTQNMYTLLGLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...TCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GGGAGCATTTGCTACACAAAAGCACTATCCACAGCCAGGGATGATGTAGCCACACTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 4 (lower is better)
Translates to: GSICYTKALSTARDDVATLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...TGTGGCTACATCATCCCTGGCTGTGGATAGTGCTTTTGTGTAGCAAATGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCCGAGGCTGTCGCCATaGCCACTGAAGCGTTTACTA +
Preference number: 4 (lower is better)
Translates to: LPPIKLVPFPRLSPCPLKPRLSP*PLKRLL
Trigger: TAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGG...CTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR GCA 90 bp TTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGGTGGGAGGTTCTTCTGCTCACTaGCATATCCCCAACACTTCA +
Preference number: 4 (lower is better)
Translates to: LGRKQPSTPCSCPALPVGGSSAH*HIPNTS
Trigger: TGAAGTGTTGGGGATATGGCAGTGAGCAGAAGAACC...TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR CCA 90 bp AGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACAGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: RKREALQSSALQGGKATTEGRCV*DIFGLE
Trigger: CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTC...TGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATCACAGGTGATACTGTGTTTTTGTAGCAGCTaGCGACCTAGCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: SGERCHCNSQEDGSQVILCFCSS*RPSPPA
Trigger: GGCCGGAGGGCTAGGTCGCCAGCTGCTACAAAAACA...CAGTATCACCTGTGATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp AGGAAGAGGGAAGCTCTTCAGTCCAGTGCGCTGCAGGGTGGGAAAGCAACAACAGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: RKREALQSSALQGGKATTATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...TGTTGTTGCTTTCCCACCCTGCAGCGCACTGGACTGAAGAGCTTCCCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATCACAGGTGATACTGGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SGERCHCNSQEDGSQVILVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...CAGTATCACCTGTGATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GGCAGACACTGGGTAGAGGCGGTTGGCCAGAATGAACTTGAATGTCACTGTGGTGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: GRHWVEAVGQNELECHCGVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...ACCACAGTGACATTCAAGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GAGGACTTCCCTGGGTGCCATCAGACCAGAGCTGGCTGTGTAGGGCAGGCGAATCAGGGTCACACAATCTaGGTCAAAGAAATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: EDFPGCHQTRAGCVGQANQGHTI*VKEIVG
Trigger: CCCCACTATTTCTTTGACCCAGATTGTGTGACCCTG...ATTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ATNPGKLVGLASTQNMYTEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...GGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACCCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 4 (lower is better)
Translates to: SLTPHSDEPWEAGWSSIYPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...GTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGCCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 4 (lower is better)
Translates to: LRLTATNPGKLVGLASTQPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...CTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATCACAGGTGATACTGCACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: SGERCHCNSQEDGSQVILHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...CAGTATCACCTGTGATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp TCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCGTTATGAGCTCCAATTaGGAGGGAGGATTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SVASSNQVGAISEAVAMPVMSSN*EGGLAD
Trigger: GTCTGCCAATCCTCCCTCCCAATTGGAGCTCATAAC...GGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp CCAGTGCCGGGCAGACACTGGGTAGAGGCGGTTGGCCAGAATGAACTTGAATGTCACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PVPGRHWVEAVGQNELECHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...ACATTCAAGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTGGCAGGAAGCACCAGTaGGGAGGGGGCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QHHQKTITTAKQDRQLSSGRKHQ*GGGQVQ
Trigger: CTGGACCTGGCCCCCTCCTCACTGGTGCTTCCTGCC...ACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTCAAAGAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCCTCATCGTTGCCTGTaGGGACTTCCCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: VKEIVGPLWSSKRSMVLRPHRCL*GLPWVP
Trigger: TGGCACCCAGGGAAGTCCTCACAGGCAACGATGAGG...CCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTCTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LSWRSLPSQATEINPCTSRSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...AGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TGTGACCTGGGAAGCATTGAAGTAGGCGACGGAGCCATTGCTGTGGACTTCGAGGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: CDLGSIEVGDGAIAVDFEAPPLR*KPGSGS
Trigger: ACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGC...CTCGAAGTCCACAGCAATGGCTCCGTCGCCTACTTCAATGCTTCCCAGGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp AGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGGGGAGCAAGATGGGCTaGGGGGAGCTTGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RICTPCWERWGQPKKAPQGSKMG*GELAVH
Trigger: ATGAACTGCAAGCTCCCCTCAGCCCATCTTGCTCCC...CTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TCCTTGTACGCCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGGGACATCTTCGGACTTaGGTGTGCTCTAGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: SLYATEKFWAQNRIRGAVGHLRT*VCSRLE
Trigger: TTCTAACCTAGAGCACACTCAAGTCCGAAGATGTCC...CACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGCGTACAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429585.5
CDS-3UTR TCA 90 bp ATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTACAGGCCTTCCCATGTTGGGACAAGGTCACTaGAGCTTCCCTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: ISEAVAMPTEAFTTGLPMLGQGH*SFPWGM
Trigger: CATTCCCCAAGGGAAGCTTCAGTGACCTTGTCCCAA...CATGGGAAGGCCTGTAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR TCA 90 bp GTTTCCAAACACACCGCCATATGCTGTGAAATCCTCAATGCTCAGCTGGCCTCTCTACAGGCCTTCCCATaGGACGACCCACACCTCCCT +
Preference number: 4 (lower is better)
Translates to: VSKHTAICCEILNAQLASLQAFP*DDPHLP
Trigger: AGGGAGGTGTGGGTCGTCTCATGGGAAGGCCTGTAG...AGAGGCCAGCTGAGCATTGAGGATTTCACAGCATATGGCGGTGTGTTTGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446552.1
CDS-3UTR TCA 90 bp GAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGCCCGATGACCTCATCTaGGGGTCAACAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: EIVGPLWSSKRSMVLRLRPDDLI*GSTRRA
Trigger: TGCTCTCCTTGTTGACCCTCAGATGAGGTCATCGGG...CCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677332.1
CDS-3UTR TCA 90 bp GTAGGAGAACTGCTCCCCCATTACGTTGAAAGCCTGGATCTGGAAGTCCTGAAGTCAGGACCTGCCCGATaGCCTCATCTGAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: VGELLPHYVESLDLEVLKSGPAR*PHLRVN
Trigger: GTTGACCCTCAGATGAGGTCATCGGGCAGGTCCTGA...CTTCAGGACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGCAGTTCTCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677332.1
CDS-3UTR GCA 90 bp GTGTACTTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGAGCACCAGCGGGACCTaGTGCTCCGCCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: VYFLLLAQHHQKTITTAKSTSGT*CSAAAA
Trigger: GGCGGCAGCGGCGGAGCAGCAGGTCCCGCTGGTGCT...CTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAAGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACGGTCAGAGTGCTGACTaGATACCAGTCGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: TATNPGKLVGLASTQNMYGQSAD*IPVDGR
Trigger: CCTGCCGTCGACTGGTATGCAGTCAGCACTCTGACC...GTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp ACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TQNMYTLLGEMGAAQESSVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GGATCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATCACAGGTGATAGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GSGERCHCNSQEDGSQVIVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...TATCACCTGTGATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp ACTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCGTCAGGTTGAGTTCCTaGACCCCAAAGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TGTGSHNLGQRNSGALVVVRLSS*TPKVRG
Trigger: TCCCCTCACCTTTGGGGTGCAGGAACTCAACCTGAC...GACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCTAGCAGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SCPLRLTATNPGKLVGLAGACSS*CSRKRE
Trigger: TTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC...TGCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: WSSIYAEYVHLVGRDGGSGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...GCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: STQNMYTLLGEMGAAQESGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...GCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATCTCCCGGTGGGAACATaGCAAACAGCCGGCGATCGC +
Preference number: 4 (lower is better)
Translates to: SWRSLPSQATEINPCTSYLPVGT*QTAGDR
Trigger: GCGATCGCCGGCTGTTTGGCATGTTCCCACCGGGAG...ATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGCACCCCATGCTCCTaGCCGGCACTCCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LAQHHQKTITTAKQDRQLSTPCS*PALPVG
Trigger: TCCCACCGGGAGTGCCGGGCAGGAGCATGGGGTGCT...TAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGCCGAGGCTGTCGCCATaGCCACTGAAGCGTTTACTA +
Preference number: 4 (lower is better)
Translates to: EIVGPLWSSKRSMVLRLRPRLSP*PLKRLL
Trigger: TAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGG...CCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp GGCAGACACTGGGTAGAGGCGGTTGGCCAGAATGAACTTGAATGTCACTGTGGTCCGAGGCTGTCGCCATaGCCACTGAAGCGTTTACTA +
Preference number: 4 (lower is better)
Translates to: GRHWVEAVGQNELECHCGPRLSP*PLKRLL
Trigger: TAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGG...ACCACAGTGACATTCAAGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp GTAGGAGAACTGCTCCCCCATTACGTTGAAAGCCTGGATCTGGAAGTCCTGAAGGCTGCCTTGGGTCCTTaGAGCCACCTGAAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VGELLPHYVESLDLEVLKAALGP*SHLKKQ
Trigger: CTGCTTCTTCAGGTGGCTGCAAGGACCCAAGGCAGC...CTTCAGGACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGCAGTTCTCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: GLASTQNMYTLLGEMGAAEGRCV*DIFGLE
Trigger: CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTC...GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CCTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: PVVEVPSFSGHRNKPVYFATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...GAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCCTCAGACGGAGCCATTGCTGTaGACTTCGAGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: RICTPCWERWGQPKKAPQTEPLL*TSRRSM
Trigger: CATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGT...CTGAGGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGTAGTACTTCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGAGCTGGCACAGTCGCTaGCGTAGGAGAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSTSTLPNSGSPITLRRESWHSR*RRRTAP
Trigger: GGGAGCAGTTCTCCTACGCCAGCGACTGTGCCAGCT...CTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGAAGTACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SGALVVIKAIHGLEAEDHPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...ATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGCAGACACTGGGTAGAGGCGGTTGGCCAGAATGAACTTGAATGTCACTGTGGTCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GRHWVEAVGQNELECHCGPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...ACCACAGTGACATTCAAGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GAGAAAGGAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: EKGDPRIHVPYASQRRTLPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...CAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTCCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCCCTTGTTGGGAGAGATaGGGGCAGCCCAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: ATNPGKLVGLASTQNMYTPCWER*GQPKKA
Trigger: AGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGG...GGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: WSSIYAEYVHLVGRDGGSHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...GCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTACCAGCCCACCTGTCGTaGAGGTCCCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: STLPNSGSPITLRREHLLPAHLS*RSLPSQ
Trigger: CTGAGAAGGAAGGGACCTCCACGACAGGTGGGCTGG...TAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATTGTGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 4 (lower is better)
Translates to: WRSLPSQATEINPCTSYCARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...ACAATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AAAGGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAAAGGTTTTGGGAGGCTGAGGTaGGTGGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KGVIPEGASQVEFLHPKGFGRLR*VDHEVR
Trigger: CCTGACCTCGTGATCCACCCACCTCAGCCTCCCAAA...ACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR CCA 90 bp GCAGGGTGGCCAGGTCCACATGCAAGGGGCTGGCCCCGAGCTTCTCCTGCAGGTGCTAGATGTTTTATGTaGATTATAAGAATTCCCCCT +
Preference number: 4 (lower is better)
Translates to: AGWPGPHARGWPRASPAGARCFM*IIRIPP
Trigger: AGGGGGAATTCTTATAATCCACATAAAACATCTAGC...ACCTGCAGGAGAAGCTCGGGGCCAGCCCCTTGCATGTGGACCTGGCCACCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR CCA 90 bp AGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAGTGCCTGGGCTGGGCTaGCAAAGGAGTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: SIYAEYVHLVGRDGGSPRVPGLG*QRSHSR
Trigger: TCTGGAATGACTCCTTTGCCAGCCCAGCCCAGGCAC...TCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677342.1
CDS-3UTR TCA 90 bp TCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCGCTGCAAGTCGCTGGTaGTGTGGCCTTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: STQNMYTLLGEMGAAQESAASRW*CGLHEC
Trigger: ACACTCATGAAGGCCACATCACCAGCGACTTGCAGC...GCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAAGTGGTCAGAGTGCTaGCTGCATACCAGTCGACGG +
Preference number: 4 (lower is better)
Translates to: GWSSIYAEYVHLVGRDGGKWSEC*LHTSRR
Trigger: CCGTCGACTGGTATGCAGTCAGCACTCTGACCACTT...GCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCAAGTGGTCAGAGTGCTaGCTGCATACCAGTCGACGG +
Preference number: 4 (lower is better)
Translates to: STQNMYTLLGEMGAAQESKWSEC*LHTSRR
Trigger: CCGTCGACTGGTATGCAGTCAGCACTCTGACCACTT...GCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp CAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTCAGGGAGGCTGGCATTaGGCTTCAGCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: QHHQKTITTAKQDRQLSSQGGWH*ASAPAG
Trigger: CCCTGCGGGAGCTGAAGCTCAATGCCAGCCTCCCTG...ACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp ACTTCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGGGACATCTTCGGACTTaGGTGTGCTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: TSTLPNSGSPITLRREHLGHLRT*VCSGPA
Trigger: GGCAGGTCCTGAGCACACTCAAGTCCGAAGATGTCC...CAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TTCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FHTPKLREPYNLKEGAFARSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...AGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTCAAAGAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VKEIVGPLWSSKRSMVLRRSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...CCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTCTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTAAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: STLPNSGSPITLRREHLLRSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...TAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GGATCCGGGGAGCGGTGTCATTGTAACTCACAGGAGGATGGATCACAGGTGATATCGTTCATAGGTCAGTaGGAGCCTGGCAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GSGERCHCNSQEDGSQVISFIGQ*EPGKGV
Trigger: GACTCCTTTGCCAGGCTCTCACTGACCTATGAACGA...TATCACCTGTGATCCATCCTCCTGTGAGTTACAATGACACCGCTCCCCGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR TCA 90 bp GAGAAAGGAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGCTCCCCCATTACGTTaGAAGCCTGGATCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: EKGDPRIHVPYASQRRTLAPPLR*KPGSGS
Trigger: ACTTCCAGATCCAGGCTTTCAACGTAATGGGGGAGC...CAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTCCTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp ACTTCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGACACCAGCTCTTCCTTaGGCTGGCCAAGAGCACACC +
Preference number: 4 (lower is better)
Translates to: TSTLPNSGSPITLRREHLTPALP*AGQEHT
Trigger: GGTGTGCTCTTGGCCAGCTCAAGGAAGAGCTGGTGT...CAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp TGCTATCTTAGAGTCATCTCATGGTCTCCACGCCTGCTTTTGGGGCAAAGATCCGCGGAAGGGGAGAGGTaGGGATCTCAGAACATGCTG +
Preference number: 4 (lower is better)
Translates to: CYLRVISWSPRLLLGQRSAEGER*GSQNML
Trigger: CAGCATGTTCTGAGATCCTCACCTCTCCCCTTCCGC...GGATCTTTGCCCCAAAAGCAGGCGTGGAGACCATGAGATGACTCTAAGATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp CTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCATCGTTCATAGGTCAGTaGGAGCCTAAGCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LAQGHTIWVKEIVGPLWSSFIGQ*EPKLPW
Trigger: CCAAGGCAGCTTAGGCTCTCACTGACCTATGAACGA...TGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CTGGCAAAGGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAATGCTCAGCTTGTCCTaGAGGAACAGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: LAKESFQKEPVRLSSCTPMLSLS*RNSSTF
Trigger: GAATGTGCTGCTGTTCCTGCAGGACAAGCTGAGCAT...TGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCCTTTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429585.5
CDS-3UTR GCA 90 bp AGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTTGGTCATGCTCAGCTTGTCCTaGAGGAACAGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: RIHVPYASQRRTLGSWLVMLSLS*RNSSTF
Trigger: GAATGTGCTGCTGTTCCTGCAGGACAAGCTGAGCAT...GACCAACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369762.7
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CCACAGAGAAGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGTCATTGTAACGAAAAGGCGCTGTCCTaGTTGTTTCCAAACACACCG +
Preference number: 4 (lower is better)
Translates to: PQRSFGPRTGSGERCHCNEKALS*LFPNTP
Trigger: CGGTGTGTTTGGAAACAAGCAGGACAGCGCCTTTTC...GTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp TCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SWRSLPSQATEINPCTSYRRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...ATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp CTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LPPIKLVPFPRLSPCPLKACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...CTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp AACTCACAGGAGGATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCGGGCTGAGGGGAGCTTaGAGTTCATGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: NSQEDGSQVILAVFVAAGGLRGA*SSCCSR
Trigger: CCTACTGCAGCATGAACTGCAAGCTCCCCTCAGCCC...GCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATCCTCCTGTGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp TCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTAGGGCGCACCTTGTCCTaGAGGAACAGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: STLPNSGSPITLRREHLLGRTLS*RNSSTF
Trigger: GAATGTGCTGCTGTTCCTGCAGGACAAGGTGCGCCC...TAGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp GAGGACTTCCCTGGGTGCCATCAGACCAGAGCTGGCTGTGTAGGGCAGGCGAATCATCAGTGTAGCAAGTaGCTACAAAGCACTAAACAG +
Preference number: 4 (lower is better)
Translates to: EDFPGCHQTRAGCVGQANHQCSK*LQSTKQ
Trigger: CTGTTTAGTGCTTTGTAGGCACTTGCTACACTGATG...ATTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp TTCCACACTCCCAAACTCAGGGAGCCCTATAACCTTAAGGAGGGAGCATTTGCTGAGGACTTCCCTGGGTaGCATCAGACCAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: FHTPKLREPYNLKEGAFAEDFPG*HQTRAV
Trigger: GACTGCTCTGGTCTGATGGCACCCAGGGAAGTCCTC...AGCAAATGCTCCCTCCTTAAGGTTATAGGGCTCCCTGAGTTTGGGAGTGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619046.5
CDS-3UTR CCA 90 bp GGGAGCATTTGCTACACAAAAGCACTATCCACAGCCAGGGATGATGTAGCCACACCATCAGACCAGAGCTaGCTGTGTAGGGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: GSICYTKALSTARDDVATPSDQS*LCRAGE
Trigger: TTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGG...TGTGGCTACATCATCCCTGGCTGTGGATAGTGCTTTTGTGTAGCAAATGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCACCATCAGACCAGAGCTaGCTGTGTAGGGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: VGLASTQNMYTLLGEMGAPSDQS*LCRAGE
Trigger: TTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGG...TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: WSSIYAEYVHLVGRDGGSATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...GCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PGKLVGLASTQNMYTLLGVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...TCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAAAGGTGAGATAGTGGGGCCCTTGTaGTCATCAAAGCGATCCATG +
Preference number: 4 (lower is better)
Translates to: GVIPEGASQVEFLHPKGEIVGPL*SSKRSM
Trigger: CATGGATCGCTTTGATGACCACAAGGGCCCCACTAT...CTCACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GTAGATGCTGGGCCCTGTGACCTGGGAAGCATTGAAGTAGGCGACGGAGCCATTCAGGGTCACACAATCTaGGTCAAAGAAATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VDAGPCDLGSIEVGDGAIQGHTI*VKEIVG
Trigger: CCCCACTATTTCTTTGACCCAGATTGTGTGACCCTG...AATGGCTCCGTCGCCTACTTCAATGCTTCCCAGGTCACAGGGCCCAGCATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AACTCACAGGAGGATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 4 (lower is better)
Translates to: NSQEDGSQVILAVFVAAGQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...GCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATCCTCCTGTGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp CCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAAGAGGGAGCAAGATaGGCTGAGGGGAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PGKLVGLASTQNMYTLLGEEGAR*AEGSLQ
Trigger: CTGCAAGCTCCCCTCAGCCCATCTTGCTCCCTCTTC...TCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CACCTGTCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HLSWRSLPSQATEINPCTICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...AGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGACAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGACACAGCGACGAACCCTaGGAAGCTGGTTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: PGKLVGLASTQNMYTLLGHSDEP*EAGWSS
Trigger: GCTAGACCAACCAGCTTCCCAGGGTTCGTCGCTGTG...TCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGACACCTCCCTACAGTTaGGACAAGGTCACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LPPIKLVPFPRLSPCPLKTPPYS*DKVTEA
Trigger: AGCTTCAGTGACCTTGTCCCAACTGTAGGGAGGTGT...CTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
3UTR CAA 72 bp CTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTaGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVGLASTQNMYT*LGEMGAAQESS
Trigger: GGAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp ATTTTATTAGGAAGGAAACAACCAAGCACCCCATGCTCCTGCCCGGCACTCCCGCACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ILLGRKQPSTPCSCPALPHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAAAGTGGTCAGAGTGCTaGCTGCATACCAGTCGACGG +
Preference number: 4 (lower is better)
Translates to: VGLASTQNMYTLLGEMGAKWSEC*LHTSRR
Trigger: CCGTCGACTGGTATGCAGTCAGCACTCTGACCACTT...TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SWRSLPSQATEINPCTSYRSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...ATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp GGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGATCTGCAGGCAGCTaGCTTGTGGTAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GWSSIYAEYVHLVGRDGGRSAGS*LVVTQE
Trigger: CTCCTGAGTTACCACAAGTCAGCTGCCTGCAGATCT...GCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR TCA 90 bp GAGAAAGGAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGAGCAGTGTCCCCACTTaGCAGATAGGAAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: EKGDPRIHVPYASQRRTLSSVPT*QIGKLR
Trigger: CCTCAGTTTTCCTATCTGTCAAGTGGGGACACTGCT...CAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTCCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677342.1
CDS-3UTR GCA 90 bp CTCTGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCAAACACACCGCCATATaGTGTGAAATCCTCAATGCT +
Preference number: 4 (lower is better)
Translates to: LWSVASSNQVGAISEAVAKHTAI*CEILNA
Trigger: AGCATTGAGGATTTCACAGCATATGGCGGTGTGTTT...GGCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR GCA 90 bp CCTCTGGTCCGTCGCTTCCTCCAATCAAGTTGGTGCCATTTCCGAGGCTGTCGCAAACACACCGCCATATaGTGTGAAATCCTCAATGCT +
Preference number: 4 (lower is better)
Translates to: PLVRRFLQSSWCHFRGCRKHTAI*CEILNA
Trigger: AGCATTGAGGATTTCACAGCATATGGCGGTGTGTTT...GCGACAGCCTCGGAAATGGCACCAACTTGATTGGAGGAAGCGACGGACCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR GCA 90 bp GGAGGATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCGACCTAGCGAAAAGGCGCTGTCCTaGTTGTTTCCAAACACACCG +
Preference number: 4 (lower is better)
Translates to: GGWITGDTGCFCSSWRPSEKALS*LFPNTP
Trigger: CGGTGTGTTTGGAAACAAGCAGGACAGCGCCTTTTC...GCTAGGTCGCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
CDS-3UTR GCA 90 bp TGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATTGTAGGCGACGGAGCCATTaGTGTGGACTTCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: WRSLPSQATEINPCTSYCRRRSH*CGLRGA
Trigger: AGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCT...ACAATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp AGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SGALVVIKAIHGLEAEDHACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...ATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GAGAAAGGAGACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: EKGDPRIHVPYASQRRTLACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...CAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGTCTCCTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCTTCCGAGGCTGTCGCCATaGCCACTGAAGCGTTTACTA +
Preference number: 4 (lower is better)
Translates to: DEPWEAGWSSIYAEYVHLPRLSP*PLKRLL
Trigger: TAGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGG...AAGGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR GCA 90 bp TCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCGGGCTTGGGTTCTTCTaGTCACTGCCATATCCCCAA +
Preference number: 4 (lower is better)
Translates to: STQNMYTLLGEMGAAQESGLGFF*SLPYPQ
Trigger: TTGGGGATATGGCAGTGAGCAGAAGAACCCAAGCCC...GCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp ACTGGCACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCGAGGATCTCAGAACATaGTGGAGGAAGCATCGAGCA +
Preference number: 4 (lower is better)
Translates to: TGTGSHNLGQRNSGALVVEDLRT*WRKHRA
Trigger: TGCTCGATGCTTCCTCCAGCATGTTCTGAGATCCTC...GACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp GTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAAGTGTGCTCAGGACCTaGCCGATGACCTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: VGLASTQNMYTLLGEMGASVLRT*PMTSSE
Trigger: CTCAGATGAGGTCATCGGGCAGGTCCTGAGCACACT...TGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677332.1
CDS-3UTR CCA 90 bp CAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACAGACAGTTAAGTAGTTCAGCTCCCGCAGGGTaGCCAGGTCCACATGCAAGG +
Preference number: 4 (lower is better)
Translates to: QHHQKTITTAKQDRQLSSSAPAG*PGPHAR
Trigger: CCTTGCATGTGGACCTGGCCACCCTGCGGGAGCTGA...ACTACTTAACTGTCTGTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ACAGGGTCACACAATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCATCAAACCATCAGACCAGAGCTaGCTGTGTAGGGCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: TGSHNLGQRNSGALVVIKPSDQS*LCRAGE
Trigger: TTCGCCTGCCCTACACAGCCAGCTCTGGTCTGATGG...TTTGATGACCACAAGGGCCCCACTATTTCTTTGACCCAGATTGTGTGACCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ATCTGGGTCAAAGAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCGAGGGCCGCTGTGTATaGGACATCTTCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: IWVKEIVGPLWSSKRSMVEGRCV*DIFGLE
Trigger: CTCAAGTCCGAAGATGTCCCATACACAGCGGCCCTC...GACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTCTTTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AACTCACAGGAGGATGGATCACAGGTGATACTGGCTGTTTTTGTAGCAGCTGGCGCCACAGAGAAGTTTTaGGCCCAGAACAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: NSQEDGSQVILAVFVAAGATEKF*AQNRIR
Trigger: CCGGATCCTGTTCTGGGCCCAAAACTTCTCTGTGGC...GCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGATCCATCCTCCTGTGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp TCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATGTCAGGTCCTCCCACTaGTCCTTGTACGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SWRSLPSQATEINPCTSYVRSSH*SLYATE
Trigger: CTCTGTGGCGTACAAGGACCAGTGGGAGGACCTGAC...ATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCAGGTCAGTGAGAGCCTaGCAAAGGAGTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: GLASTQNMYTLLGEMGAARSVRA*QRSHSR
Trigger: TCTGGAATGACTCCTTTGCCAGGCTCTCACTGACCT...GGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
CDS-3UTR CCA 90 bp TTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FLLLAQHHQKTITTAKQDVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...GTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GCGACGAACCCTGGGAAGCTGGTTGGTCTAGCATCTACGCAGAATATGTACACCATAGTGGGGCCCTTGTaGTCATCAAAGCGATCCATG +
Preference number: 4 (lower is better)
Translates to: ATNPGKLVGLASTQNMYTIVGPL*SSKRSM
Trigger: CATGGATCGCTTTGATGACCACAAGGGCCCCACTAT...GGTGTACATATTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGGTTCGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp ACCCTAGAATTCATGTCCCTTACGCCTCACAGCGACGAACCCTGGGAAGCTGGTCAGGGTCACACAATCTaGGTCAAAGAAATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TLEFMSLTPHSDEPWEAGQGHTI*VKEIVG
Trigger: CCCCACTATTTCTTTGACCCAGATTGTGTGACCCTG...ACCAGCTTCCCAGGGTTCGTCGCTGTGAGGCGTAAGGGACATGAATTCTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GTCGCTGGCGTAGGAGAACTGCTCCCCCATTACGTTGAAAGCCTGGATCTGGAACAGGGTCACACAATCTaGGTCAAAGAAATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VAGVGELLPHYVESLDLEQGHTI*VKEIVG
Trigger: CCCCACTATTTCTTTGACCCAGATTGTGTGACCCTG...TTCCAGATCCAGGCTTTCAACGTAATGGGGGAGCAGTTCTCCTACGCCAGCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TCGTGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATCAGTGCGCTGCAGGGTaGGAAAGCAACAACACGGAC +
Preference number: 4 (lower is better)
Translates to: SWRSLPSQATEINPCTSYQCAAG*ESNNTD
Trigger: GTCCGTGTTGTTGCTTTCCCACCCTGCAGCGCACTG...ATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 4 (lower is better)
Translates to: WSSIYAEYVHLVGRDGGSPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...GCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp TTCTTATTGTTAGCACAACATCACCAGAAAACGATAACGACAGCCAAGCAGGACGCCCGGCACTCCCGGTaGGAACATGCCAAACAGCCG +
Preference number: 4 (lower is better)
Translates to: FLLLAQHHQKTITTAKQDARHSR*EHAKQP
Trigger: CGGCTGTTTGGCATGTTCCCACCGGGAGTGCCGGGC...GTCCTGCTTGGCTGTCGTTATCGTTTTCTGGTGATGTTGTGCTAACAATAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp CTGCTTGTTTCCAAACACACCGCCATATGCTGTGAAATCCTCAATGCTCAGCTCAAGGCAGTCATGGGGTaGGGAGATCTGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLVSKHTAICCEILNAQLKAVMG*GDLQAA
Trigger: AGCTGCCTGCAGATCTCCCCACCCCATGACTGCCTT...GAGCTGAGCATTGAGGATTTCACAGCATATGGCGGTGTGTTTGGAAACAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439372.6
ENST00000455205.5
CDS-3UTR CCA 90 bp GGCACAGTCGCTGGCGTAGGAGAACTGCTCCCCCATTACGTTGAAAGCCTGGATGATATCCAAAGTGCTTaGTACTCAGTAGGTACCTGG +
Preference number: 4 (lower is better)
Translates to: GTVAGVGELLPHYVESLDDIQSA*YSVGTW
Trigger: CCAGGTACCTACTGAGTACCAAGCACTTTGGATATC...ATCCAGGCTTTCAACGTAATGGGGGAGCAGTTCTCCTACGCCAGCGACTGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp GGAGCTTGCAGTTCATGCTGCAGTAGGAAGAGGGAAGCTCTTCAGTCCAGTGCGGATCTCAGAACATGCTaGAGGAAGCATCGAGCATTG +
Preference number: 4 (lower is better)
Translates to: GACSSCCSRKREALQSSADLRTC*RKHRAL
Trigger: CAATGCTCGATGCTTCCTCCAGCATGTTCTGAGATC...CGCACTGGACTGAAGAGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp AATCAAGTTGGTGCCATTTCCGAGGCTGTCGCCATGCCCACTGAAGCGTTTACTCACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: NQVGAISEAVAMPTEAFTHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...AGTAAACGCTTCAGTGGGCATGGCGACAGCCTCGGAAATGGCACCAACTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439372.6
ENST00000446552.1
ENST00000455205.5
CDS-3UTR TCA 90 bp AGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGACACCGCCATATGCTGTaGAATCCTCAATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SIYAEYVHLVGRDGGSPRHRHML*NPQCSA
Trigger: AGCTGAGCATTGAGGATTTCACAGCATATGGCGGTG...TCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp TGGAGGTCCCTTCCTTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATTGTAGGAGCCAGTCAGGTTaGGTTCCTGCACCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: WRSLPSQATEINPCTSYCRSQSG*VPAPQR
Trigger: CCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCT...ACAATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAAGGAAGGGACCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR TCA 90 bp AGTTTTGGGCCCAGAACAGGATCCGGGGAGCGGTGTCATTGTAACTCACAGGAGCACCCATTAGCTGTATaGGCTTGGACAAGTCACTTA +
Preference number: 4 (lower is better)
Translates to: SFGPRTGSGERCHCNSQEHPLAV*AWTSHL
Trigger: TAAGTGACTTGTCCAAGCTCATACAGCTAATGGGTG...CTCCTGTGAGTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp TTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATGTGCAGGCCACCACTCACAGCCCTCTaGTATAGGTGGTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LWSSKRSMVLRLRIMCRPPLTAL*YRWCLH
Trigger: ATGAAGACACCACCTATATCAGAGGGCTGTGAGTGG...TGGCCTGCACATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR TCA 90 bp CTGGCAAAGGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAAGCATTGAAGTCTTTTaGGCTCTTAGGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: LAKESFQKEPVRLSSCTPSIEVF*ALRTTV
Trigger: CACTGTGGTCCTAAGAGCTCAAAAGACTTCAATGCT...TGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCCTTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455205.5
CDS-3UTR GCA 90 bp TACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCCCAAGAAAGCTCGAAAAGGCGCTGTCCTaGTTGTTTCCAAACACACCG +
Preference number: 4 (lower is better)
Translates to: YAEYVHLVGRDGGSPRKLEKALS*LFPNTP
Trigger: CGGTGTGTTTGGAAACAAGCAGGACAGCGCCTTTTC...GAGCTTTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp TGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCAGCGCTTGCAGTTCATGCTaGAGTAGGAAGAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: WSSIYAEYVHLVGRDGGSACSSC*SRKREA
Trigger: AGCTTCCCTCTTCCTACTGCAGCATGAACTGCAAGC...GCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR GCA 90 bp GGTTGGTCTAGCATCTACGCAGAATATGTACACCTTGTTGGGAGAGATGGGGGCGGAGCTTGCAGTTCATaGTGCAGTAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GWSSIYAEYVHLVGRDGGGACSS*CSRKRE
Trigger: TTCCCTCTTCCTACTGCAGCATGAACTGCAAGCTCC...GCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAGATGCTAGACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp AAAGGAGTCATTCCAGAAGGAGCCAGTCAGGTTGAGTTCCTGCACCCCAAAGGTAGGTCAGTGAGAGCCTaGCAAAGGAGTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: KGVIPEGASQVEFLHPKGRSVRA*QRSHSR
Trigger: TCTGGAATGACTCCTTTGCCAGGCTCTCACTGACCT...ACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTTCTGGAATGACTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429585.5
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
CDS-3UTR CCA 90 bp TTCTCAGGCCACAGAAATAAACCCGTGTACTTCTTATTGTTAGCACAACATCACGTGCCGGGCAGACACTaGGTAGAGGCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FSGHRNKPVYFLLLAQHHVPGRH*VEAVGQ
Trigger: CTGGCCAACCGCCTCTACCCAGTGTCTGCCCGGCAC...GTGATGTTGTGCTAACAATAAGAAGTACACGGGTTTATTTCTGTGGCCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GTCAAAGAAATAGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGATATGTACACCTTGTTaGGAGAGATGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VKEIVGPLWSSKRSMVLRICTPC*ERWGQP
Trigger: GGGCTGCCCCCATCTCTCCCAACAAGGTGTACATAT...CCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACTATTTCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000439372.6
ENST00000455205.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGGAGCATTTGCTACACAAAAGCACTATCCACAGCCAGGGATGATGTAGCCACACCCTGGGAAGCTGGTTaGTCTAGCATCTACGCAGAA +
Preference number: 4 (lower is better)
Translates to: GSICYTKALSTARDDVATPWEAG*SSIYAE
Trigger: TTCTGCGTAGATGCTAGACCAACCAGCTTCCCAGGG...TGTGGCTACATCATCCCTGGCTGTGGATAGTGCTTTTGTGTAGCAAATGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369762.7
ENST00000439372.6
ENST00000455205.5
ENST00000619046.5
ENST00000677332.1
ENST00000677342.1
ENST00000679241.1
CDS-3UTR CCA 90 bp GGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTGAGGCTGAGGATCATGTGGATATCCAAAGTGCTTaGTACTCAGTAGGTACCTGG +