Pregenerated sensors for ATP5PF (Homo sapiens)
Ensembl gene IDs: ENSG00000154723Ensembl transcript IDs: ENST00000400087.7, ENST00000400093.3, ENST00000400099.5, ENST00000486002.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTCACCACGAGTCAGGGATCGGCAAACATTTTCTTCTGTAGCTACAAGGCTAGCCTCTCCAGCTCTTGCTaGTACTCTGAACTAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: FTTSQGSANIFFCSYKASLSSSC*YSELAS Trigger: TGATGCTAGTTCAGAGTATCAGCAAGAGCTGGAGAG...GCTAGCCTTGTAGCTACAGAAGAAAATGTTTGCCGATCCCTGACTCGTGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400099.5 |
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| CDS-3UTR TCA 90 bp | ATTTTCACCACGAGTCAGGGATCGGCAAACATTTTCTTCTGTAGCTACAAGGCTTCTGAAGAATCATGCTaGTTCGGACAGGAAGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: IFTTSQGSANIFFCSYKASEESC*FGQEAS Trigger: AGACGCTTCCTGTCCGAATCAGCATGATTCTTCAGA...AGCCTTGTAGCTACAGAAGAAAATGTTTGCCGATCCCTGACTCGTGGTGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400099.5 |
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| CDS-3UTR CCA 90 bp | AAATTTTCACCACGAGTCAGGGATCGGCAAACATTTTCTTCTGTAGCTACAAGGGTCATCATCTCTGGATaGCTGCCAACTTCTCAAATG | + |
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Preference number: 4 (lower is better) Translates to: KFSPRVRDRQTFSSVATRVIISG*LPTSQM Trigger: CATTTGAGAAGTTGGCAGCCATCCAGAGATGATGAC...CCTTGTAGCTACAGAAGAAAATGTTTGCCGATCCCTGACTCGTGGTGAAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400099.5 |
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| CDS CCA 90 bp | ATTGGGGCGTTGTGCTTCCTTGTACCTCGTGAGCCTCCGTTGCCTTaGGCGGTCGTTTTGCGCACCCTGCCGGGAGTTGTAGTCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: IGALCFLVPREPPLP*AVVLRTLPGVVVLD Trigger: GTCCAGGACTACAACTCCCGGCAGGGTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS GCA 90 bp | GCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTTGTaGTTCCTTGTACCTCGTGAGCCTCCGTTGCCTTGGGCGGTCGTT | + |
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Preference number: 5 (lower is better) Translates to: AGKVRLCKTKRIGAL*FLVPREPPLPWAVV Trigger: AACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTTGTTTTACACAGTCTCACTTTCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS TCA 90 bp | TCCTGTTCGTTAGGGTTATCGAAGTGTATAAAGGTGCAGGGAAAGTaGGACTGTGTAAAACAAAGCGGATTGGGGCGTTGTGCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SCSLGLSKCIKVQGK*DCVKQSGLGRCASL Trigger: CAAGGAAGCACAACGCCCCAATCCGCTTTGTTTTACACAGTCTCACTTTCCCTGCACCTTTATACACTTCGATAACCCTAACGAACAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS GCA 90 bp | TCAGATCCCCACCATTTAATCACTATGTTATGTGATCTCCTATACTaGTCTTATTCTAACAGCAAACATTTAGCCGGCAGCTTCTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SDPHHLITMLCDLLY*SYSNSKHLAGSFSG Trigger: GCCTGAGAAGCTGCCGGCTAAATGTTTGCTGTTAGAATAAGAGCAGTATAGGAGATCACATAACATAGTGATTAAATGGTGGGGATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486002.1 |
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| CDS GCA 72 bp | GGGCGTTGTGCTTCCTTGTACCTCGTGAGCCTCCGTTaGCTTGGGCGGTCGTTTTGCGCACCCTGCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: GRCASLYLVSLR*LGRSFCAPCRE Trigger: CTCCCGGCAGGGTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS CAA 72 bp | GGGGCGTTGTGCTTCCTTGTACCTCGTGAGCCTCCGTaGCCTTGGGCGGTCGTTTTGCGCACCCTGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: GALCFLVPREPP*PWAVVLRTLPG Trigger: TCCCGGCAGGGTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS CAA 90 bp | TGCTTCCTTGTACCTCGTGAGCCTCCGTTGCCTTGGGCGGTCGTTTaGCGCACCCTGCCGGGAGTTGTAGTCCTGGACCCGAAGGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: CFLVPREPPLPWAVV*RTLPGVVVLDPKVP Trigger: AGGCACCTTCGGGTCCAGGACTACAACTCCCGGCAGGGTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS CAA 90 bp | AAGCGGATTGGGGCGTTGTGCTTCCTTGTACCTCGTGAGCCTCCGTaGCCTTGGGCGGTCGTTTTGCGCACCCTGCCGGGAGTTGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: KRIGALCFLVPREPP*PWAVVLRTLPGVVV Trigger: GACTACAACTCCCGGCAGGGTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS CAA 90 bp | AATCATGCTGATTCTCGTGAGCCTCCGTTGCCTTGGGCGGTCGTTTaGCGCACCCTGCCGGGAGTTGTAGTCCTGGACCCGAAGGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: NHADSREPPLPWAVV*RTLPGVVVLDPKVP Trigger: AGGCACCTTCGGGTCCAGGACTACAACTCCCGGCAGGGTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGAATCAGCATGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400087.7 |
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| CDS TCA 72 bp | AAAGCGGATTGGGGCGTTGTGCTTCCTTGTACCTCGTaGGCCTCCGTTGCCTTGGGCGGTCGTTTTGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: KADWGVVLPCTS*ASVALGGRFAH Trigger: GTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS CCA 72 bp | TTGTGCTTCCTTGTACCTCGTGAGCCTCCGTTGCCTTaGGCGGTCGTTTTGCGCACCCTGCCGGGAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LCFLVPREPPLP*AVVLRTLPGVV Trigger: TACAACTCCCGGCAGGGTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS CAA 72 bp | CCTCTGAAGAATCATGCTGATTCTCGTGAGCCTCCGTaGCCTTGGGCGGTCGTTTTGCGCACCCTGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: PLKNHADSREPP*PWAVVLRTLPG Trigger: TCCCGGCAGGGTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGAATCAGCATGATTCTTCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400087.7 |
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| CDS CAA 90 bp | GGTGCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTaGTGCTTCCTTGTACCTCGTGAGCCTCCGTTGCCTTGGGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: GAGKVRLCKTKRIGA*CFLVPREPPLPWAV Trigger: GACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTTGTTTTACACAGTCTCACTTTCCCTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS GCA 72 bp | ATGCTGATTCGGACAGGAAGCGTCTCGGAGACAGTCTaGGACCGGACGGGTCTAGGTGAGACAGAAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: MLIRTGSVSETV*DRTGLGETEAK Trigger: TTTGGCTTCTGTCTCACCTAGACCCGTCCGGTCGCAGACTGTCTCCGAGACGCTTCCTGTCCGAATCAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS CCA 72 bp | AAGAATCATGCTGATTCTCGTGAGCCTCCGTTGCCTTaGGCGGTCGTTTTGCGCACCCTGCCGGGAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: KNHADSREPPLP*AVVLRTLPGVV Trigger: TACAACTCCCGGCAGGGTGCGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGAATCAGCATGATTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400087.7 |
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| CDS CAA 72 bp | TGTGTAAAACAAAGCGGATTGGGGCGTTGTGCTTCCTaGTACCTCGTGAGCCTCCGTTGCCTTGGGCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: CVKQSGLGRCAS*YLVSLRCLGRS Trigger: CGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTTGTTTTACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS GCA 72 bp | GTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTTGTaGTTCCTTGTACCTCGTGAGCCTCCGTTGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VRLCKTKRIGAL*FLVPREPPLPW Trigger: CCAAGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTTGTTTTACACAGTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS CAA 72 bp | AAAGTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTaGTGCTTCCTTGTACCTCGTGAGCCTCCGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KVRLCKTKRIGA*CFLVPREPPLP Trigger: AGGCAACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTTGTTTTACACAGTCTCACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS TCA 72 bp | TTAGGGTTATCGAAGTGTATAAAGGTGCAGGGAAAGTaGGACTGTGTAAAACAAAGCGGATTGGGGCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LGLSKCIKVQGK*DCVKQSGLGRC Trigger: ACAACGCCCCAATCCGCTTTGTTTTACACAGTCTCACTTTCCCTGCACCTTTATACACTTCGATAACCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400093.3 |
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| CDS CCA 72 bp | CTGGTTAGCTGCTTAAGATTAGAATGTCATCATCTCTaGATGGCTGCCAACTTCTCAAATGCTGAGAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LVSCLRLECHHL*MAANFSNAEKN Trigger: ATTTTTCTCAGCATTTGAGAAGTTGGCAGCCATCCAGAGATGATGACATTCTAATCTTAAGCAGCTAACCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400099.5 |
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| CDS GCA 72 bp | CACCATTTAATCACTATGTTATGTGATCTCCTATACTaGTCTTATTCTAACAGCAAACATTTAGCCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HHLITMLCDLLY*SYSNSKHLAGS Trigger: GCTGCCGGCTAAATGTTTGCTGTTAGAATAAGAGCAGTATAGGAGATCACATAACATAGTGATTAAATGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486002.1 |
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| CDS TCA 72 bp | AATATTCTTCACTTATCCCCCACAAGAATGAATCTGTaGTTTATAAGACGTACCTTCAAATTTGAAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: NILHLSPTRMNL*FIRRTFKFEGG Trigger: CCCACCTTCAAATTTGAAGGTACGTCTTATAAATCACAGATTCATTCTTGTGGGGGATAAGTGAAGAATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486002.1 |
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