Pregenerated sensors for ATP5PB (Homo sapiens)
Ensembl gene IDs: ENSG00000116459Ensembl transcript IDs: ENST00000369722.8, ENST00000464154.1, ENST00000493119.5
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACTACATTTTGCTTATCCATTCATCTACTGATGGCCGATTGGGCTaGTTCTATGTTTTAGCTATTGTGAACAATGGCTGCTATCACCAT | + |
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Preference number: 1 (lower is better) Translates to: YYILLIHSSTDGRLG*FYVLAIVNNGCYHH Trigger: ATGGTGATAGCAGCCATTGTTCACAATAGCTAAAACATAGAAGCAGCCCAATCGGCCATCAGTAGATGAATGGATAAGCAAAATGTAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTGCTCTCGGCCTTCCAAAGTaGAGGCATTACAGGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: VNNGCYHHGTQVSLQDPALGLPK*RHYRCE Trigger: CTCACACCTGTAATGCCTGCACTTTGGAAGGCCGAG...AGCAGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGAGGAGTCGAGGTCTGTTaGCCAGGCTGGAGTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SYCEQWLLSPWNTSISSRGVEVC*PGWSAV Trigger: CACTGCACTCCAGCCTGGGCAACAGACCTCGACTCC...TCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGAAGGTGTGAGCCACTGTaGCTGGCCTGCTGCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: SYCEQWLLSPWNTSISSRRCEPL*LACCMD Trigger: ATCCATGCAGCAGGCCAGGCACAGTGGCTCACACCT...TCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTGTGAGCCACTGTGCCTaGCCTGCTGCATGGATTCTT | + |
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Preference number: 2 (lower is better) Translates to: IVNNGCYHHGTQVSLQDPVSHCA*PAAWIL Trigger: AAGAATCCATGCAGCAGGCCAGGCACAGTGGCTCAC...AGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR CCA 90 bp | GCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCTGTGTTGGCCTGGCTaGTTTCAAACTCCTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: AIVNNGCYHHGTQVSLQDLCWPG*FQTPDL Trigger: GAGGTCAGGAGTTTGAAACCAGCCAGGCCAACACAG...GTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGGCTCACTGCAACCTTTaGCTCCTGCGTTCAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: SSRFIHAVASVRIFFLEVAHCNL*LLRSSN Trigger: ATTGCTTGAACGCAGGAGGCAAAGGTTGCAGTGAGC...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGAGGGTTTCACTGTGTTaGCCTGGCTGGTTTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: SSRFIHAVASVRIFFLEVRVSLC*PGWFQT Trigger: AGTTTGAAACCAGCCAGGCCAACACAGTGAAACCCT...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGGCCTGGCCTGCTGCATaGATTCTTAAGAGTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: SSRFIHAVASVRIFFLEVAWPAA*ILKSDF Trigger: AAAATCACTCTTAAGAATCCATGCAGCAGGCCAGGC...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTGCTTATTTCTACGAACAGTaGACAAGTGTTCCAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: VNNGCYHHGTQVSLQDPAYFYEQ*TSVPTS Trigger: AGAAGTTGGAACACTTGTGCACTGTTCGTAGAAATA...AGCAGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR CCA 90 bp | GCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACGTCGACTGGGATTGCTaGATCATGGTATTTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: AIVNNGCYHHGTQVSLQDVDWDC*IMVFPF Trigger: AAATGGAAATACCATGATCCAGCAATCCCAGTCGAC...GTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR CAA 90 bp | ATATTTCTACGAACAGTGCACAAGTGTTCCAACTTCTCCACTTCCTaGCCAACACTTGTTATTTTCTATGTTCCTGATAGGTGTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: IFLRTVHKCSNFSTS*PTLVIFYVPDRCLL Trigger: CAGCAGACACCTATCAGGAACATAGAAAATAACAAGTGTTGGCAAGGAAGTGGAGAAGTTGGAACACTTGTGCACTGTTCGTAGAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR CAA 90 bp | TGGATATACTACATTTTGCTTATCCATTCATCTACTGATGGCCGATaGGGCTGCTTCTATGTTTTAGCTATTGTGAACAATGGCTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: WIYYILLIHSSTDGR*GCFYVLAIVNNGCY Trigger: ATAGCAGCCATTGTTCACAATAGCTAAAACATAGAAGCAGCCCAATCGGCCATCAGTAGATGAATGGATAAGCAAAATGTAGTATATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTGCTCAGGGTTTCACTGTGTaGGCCTGGCTGGTTTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: VNNGCYHHGTQVSLQDPAQGFTV*AWLVSN Trigger: GTTTGAAACCAGCCAGGCCAACACAGTGAAACCCTG...AGCAGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGATGGAGTCGAGGTCTGTaGCCCAGGCTGGAGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: SYCEQWLLSPWNTSISSRWSRGL*PRLECS Trigger: ACTGCACTCCAGCCTGGGCAACAGACCTCGACTCCA...TCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR CAA 90 bp | ATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTAGCTCACTGCAACCTTaGCCTCCTGCGTTCAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: IVNNGCYHHGTQVSLQDPSSLQP*PPAFKQ Trigger: TTGCTTGAACGCAGGAGGCAAAGGTTGCAGTGAGCT...AGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR GCA 72 bp | TTGCTTATCCATTCATCTACTGATGGCCGATTGGGCTaGTTCTATGTTTTAGCTATTGTGAACAATGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LLIHSSTDGRLG*FYVLAIVNNGC Trigger: GCAGCCATTGTTCACAATAGCTAAAACATAGAAGCAGCCCAATCGGCCATCAGTAGATGAATGGATAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR GCA 72 bp | CATAATGGCTGTACCATTTCATATTTCTACGAACAGTaGACAAGTGTTCCAACTTCTCCACTTCCTTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: HNGCTISYFYEQ*TSVPTSPLPCQ Trigger: TTGGCAAGGAAGTGGAGAAGTTGGAACACTTGTGCACTGTTCGTAGAAATATGAAATGGTACAGCCATTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR GCA 72 bp | GGCTGCTTCTATGTTTTAGCTATTGTGAACAATGGCTaGTATCACCATGGAACACAAGTATCTCTTCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: GCFYVLAIVNNG*YHHGTQVSLQD Trigger: GTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCTAAAACATAGAAGCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACTTCCTTGCCAACACTaGTTATTTTCTATGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: SYCEQWLLSPWNTSISSRLPCQH*LFSMFL Trigger: CAGGAACATAGAAAATAACAAGTGTTGGCAAGGAAG...TCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR CCA 72 bp | ATTGGGCTGCTTCTATGTTTTAGCTATTGTGAACAATaGCTGCTATCACCATGGAACACAAGTATCTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: IGLLLCFSYCEQ*LLSPWNTSISS Trigger: TGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCTAAAACATAGAAGCAGCCCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR TCA 72 bp | CATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTaGAGTGGAATAATATTCCATTGCATGGATATACTA | + |
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Preference number: 3 (lower is better) Translates to: HSCCSQCQNFLP*SGIIFHCMDIL Trigger: TAGTATATCCATGCAATGGAATATTATTCCACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | ATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTGGAGTCGAGGTCTGTTaGCCAGGCTGGAGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: IVNNGCYHHGTQVSLQDPGVEVC*PGWSAV Trigger: CACTGCACTCCAGCCTGGGCAACAGACCTCGACTCC...AGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGAGGTGTGAGCCACTGTaGCTGGCCTGCTGCATGGAT | + |
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Preference number: 4 (lower is better) Translates to: SSRFIHAVASVRIFFLEVRCEPL*LACCMD Trigger: ATCCATGCAGCAGGCCAGGCACAGTGGCTCACACCT...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGGTGAGCCACTGTGCCTaGCCTGCTGCATGGATTCTT | + |
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Preference number: 4 (lower is better) Translates to: SSRFIHAVASVRIFFLEVVSHCA*PAAWIL Trigger: AAGAATCCATGCAGCAGGCCAGGCACAGTGGCTCAC...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | ATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTCTCGGCCTTCCAAAGTaGAGGCATTACAGGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: IVNNGCYHHGTQVSLQDPLGLPK*RHYRCE Trigger: CTCACACCTGTAATGCCTGCACTTTGGAAGGCCGAG...AGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGCTGTGTTGGCCTGGCTaGTTTCAAACTCCTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: SSRFIHAVASVRIFFLEVLCWPG*FQTPDL Trigger: GAGGTCAGGAGTTTGAAACCAGCCAGGCCAACACAG...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | GCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACGCTCACTGCAACCTTTaGCTCCTGCGTTCAAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: AIVNNGCYHHGTQVSLQDAHCNL*LLRSSN Trigger: ATTGCTTGAACGCAGGAGGCAAAGGTTGCAGTGAGC...GTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGTACAGGGACAAGGTGTaGCTGCCCTGTATGAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SSRFIHAVASVRIFFLEVYRDKV*LPCMKG Trigger: ACCTTTCATACAGGGCAGCCACACCTTGTCCCTGTA...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CCA 90 bp | GTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTGCTTGGCTGCTATCACCATaGAACACAAGTATCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VNNGCYHHGTQVSLQDPAWLLSP*NTSISS Trigger: TGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCA...AGCAGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | GTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTGCTATTGTGAACAATGGCTaGTATCACCATGGAACACAA | + |
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Preference number: 4 (lower is better) Translates to: VNNGCYHHGTQVSLQDPAIVNNG*YHHGTQ Trigger: TTGTGTTCCATGGTGATAGCAGCCATTGTTCACAAT...AGCAGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | GTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTGCTAATACATCCTTAATGTaGCACCATCACCACTATCCA | + |
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Preference number: 4 (lower is better) Translates to: VNNGCYHHGTQVSLQDPANTSLM*HHHHYP Trigger: TGGATAGTGGTGATGGTGGCACATTAAGGATGTATT...AGCAGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CCA 90 bp | AGCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGAAGGGTTTCACTGTGTTaGCCTGGCTGGTTTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: SYCEQWLLSPWNTSISSRRVSLC*PGWFQT Trigger: AGTTTGAAACCAGCCAGGCCAACACAGTGAAACCCT...TCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR CAA 72 bp | ACAAGTGTTCCAACTTCTCCACTTCCTTGCCAACACTaGTTATTTTCTATGTTCCTGATAGGTGTCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TSVPTSPLPCQH*LFSMFLIGVCW Trigger: CCAGCAGACACCTATCAGGAACATAGAAAATAACAAGTGTTGGCAAGGAAGTGGAGAAGTTGGAACACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR CAA 72 bp | CGAACAGTGCACAAGTGTTCCAACTTCTCCACTTCCTaGCCAACACTTGTTATTTTCTATGTTCCTGATAGG | + |
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Preference number: 4 (lower is better) Translates to: RTVHKCSNFSTS*PTLVIFYVPDR Trigger: CCTATCAGGAACATAGAAAATAACAAGTGTTGGCAAGGAAGTGGAGAAGTTGGAACACTTGTGCACTGTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | ATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTCTCAAGGTTCATTCATaGTGTAGCCAGTGTCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: IVNNGCYHHGTQVSLQDPLKVHS*CSQCQN Trigger: ATTCTGACACTGGCTACAGCATGAATGAACCTTGAG...AGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CCA 90 bp | AGCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGAGCCTGGCCTGCTGCATaGATTCTTAAGAGTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: SYCEQWLLSPWNTSISSRAWPAA*ILKSDF Trigger: AAAATCACTCTTAAGAATCCATGCAGCAGGCCAGGC...TCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGGTCGACTGGGATTGCTaGATCATGGTATTTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: SSRFIHAVASVRIFFLEVVDWDC*IMVFPF Trigger: AAATGGAAATACCATGATCCAGCAATCCCAGTCGAC...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CCA 90 bp | ATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCCTAGCTATTGTGAACAATaGCTGCTATCACCATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: IVNNGCYHHGTQVSLQDPSYCEQ*LLSPWN Trigger: GTTCCATGGTGATAGCAGCCATTGTTCACAATAGCT...AGGGTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGCTTCTCCGTATCAATTaGATTCTGGATGTGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SSRFIHAVASVRIFFLEVLLRIN*ILDVLD Trigger: ATCCAACACATCCAGAATGCAATTGATACGGAGAAG...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | AGCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGAGATGGCCGATTGGGCTaGTTCTATGTTTTAGCTATT | + |
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Preference number: 4 (lower is better) Translates to: SYCEQWLLSPWNTSISSRDGRLG*FYVLAI Trigger: AATAGCTAAAACATAGAAGCAGCCCAATCGGCCATC...TCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR GCA 90 bp | AGCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGATATTTCTACGAACAGTaGACAAGTGTTCCAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: SYCEQWLLSPWNTSISSRYFYEQ*TSVPTS Trigger: AGAAGTTGGAACACTTGTGCACTGTTCGTAGAAATA...TCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGATCCTTGTACAAGTATaGGAGAATCAAATGCAGATA | + |
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Preference number: 4 (lower is better) Translates to: SSRFIHAVASVRIFFLEVILVQV*ENQMQI Trigger: TATCTGCATTTGATTCTCCCATACTTGTACAAGGAT...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| 3UTR CAA 72 bp | TACATTTTGCTTATCCATTCATCTACTGATGGCCGATaGGGCTGCTTCTATGTTTTAGCTATTGTGAACAAT | + |
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Preference number: 4 (lower is better) Translates to: YILLIHSSTDGR*GCFYVLAIVNN Trigger: ATTGTTCACAATAGCTAAAACATAGAAGCAGCCCAATCGGCCATCAGTAGATGAATGGATAAGCAAAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS CCA 90 bp | TGCGGTTCCCTCGGGAGAGGGGCGGAGGCTCAGAGGTGCACCACGTaGGGTTTGCTGCCGGAGCGGAGTCTCCGGCCGGCGTCCAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: CGSLGRGAEAQRCTT*GLLPERSLRPASSL Trigger: CAAACTGGACGCCGGCCGGAGACTCCGCTCCGGCAGCAAACCCCACGTGGTGCACCTCTGAGCCTCCGCCCCTCTCCCGAGGGAACCGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493119.5 |
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| CDS TCA 90 bp | GAGAGGGGGCTGCAGATAGACAAGGCGAAGGTCAGCAAAGTCAAATaGAATCTGGTTTGCCCTTTCCTTACCCCCGCCAGGCTCTATCAC | + |
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Preference number: 5 (lower is better) Translates to: ERGLQIDKAKVSKVK*NLVCPFLTPARLYH Trigger: GTGATAGAGCCTGGCGGGGGTAAGGAAAGGGCAAACCAGATTTCATTTGACTTTGCTGACCTTCGCCTTGTCTATCTGCAGCCCCCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000464154.1 |
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| CDS-3UTR CAA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGTGGAGTCGAGGTCTGTaGCCCAGGCTGGAGTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: SSRFIHAVASVRIFFLEVWSRGL*PRLECS Trigger: ACTGCACTCCAGCCTGGGCAACAGACCTCGACTCCA...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CAA 90 bp | GCTATTGTGAACAATGGCTGCTATCACCATGGAACACAAGTATCTCTTCAAGACCAGGGTTTCACTGTGTaGGCCTGGCTGGTTTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: AIVNNGCYHHGTQVSLQDQGFTV*AWLVSN Trigger: GTTTGAAACCAGCCAGGCCAACACAGTGAAACCCTG...GTCTTGAAGAGATACTTGTGTTCCATGGTGATAGCAGCCATTGTTCACAATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS-3UTR CAA 90 bp | TCCTCAAGGTTCATTCATGCTGTAGCCAGTGTCAGAATTTTCTTCCTTGAAGTGAGCTCACTGCAACCTTaGCCTCCTGCGTTCAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SSRFIHAVASVRIFFLEVSSLQP*PPAFKQ Trigger: TTGCTTGAACGCAGGAGGCAAAGGTTGCAGTGAGCT...CACTTCAAGGAAGAAAATTCTGACACTGGCTACAGCATGAATGAACCTTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369722.8 |
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| CDS TCA 90 bp | TCTGTCAGGGCAGGACCAAGATGGCCGCTCACAAGTCTCGCGAGATaGAAATTTTGTACTCTTCCTTCAACTTTCCTTGGGAGATTTTTA | + |
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Preference number: 5 (lower is better) Translates to: SVRAGPRWPLTSLAR*KFCTLPSTFLGRFL Trigger: TAAAAATCTCCCAAGGAAAGTTGAAGGAAGAGTACAAAATTTTCATCTCGCGAGACTTGTGAGCGGCCATCTTGGTCCTGCCCTGACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493119.5 |
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| CDS GCA 72 bp | GAGGGGCGGAGGCTCAGAGGTGCACCACGTGGGGTTTaGTGCCGGAGCGGAGTCTCCGGCCGGCGTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: EGRRLRGAPRGV*CRSGVSGRRPV Trigger: AACTGGACGCCGGCCGGAGACTCCGCTCCGGCAGCAAACCCCACGTGGTGCACCTCTGAGCCTCCGCCCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493119.5 |
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| CDS CAA 72 bp | AGAGGGGCGGAGGCTCAGAGGTGCACCACGTGGGGTTaGCTGCCGGAGCGGAGTCTCCGGCCGGCGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: RGAEAQRCTTWG*LPERSLRPASS Trigger: ACTGGACGCCGGCCGGAGACTCCGCTCCGGCAGCAAACCCCACGTGGTGCACCTCTGAGCCTCCGCCCCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493119.5 |
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| CDS CAA 90 bp | TCCCTCGGGAGAGGGGCGGAGGCTCAGAGGTGCACCACGTGGGGTTaGCTGCCGGAGCGGAGTCTCCGGCCGGCGTCCAGTTTGAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLGRGAEAQRCTTWG*LPERSLRPASSLSP Trigger: AGGACTCAAACTGGACGCCGGCCGGAGACTCCGCTCCGGCAGCAAACCCCACGTGGTGCACCTCTGAGCCTCCGCCCCTCTCCCGAGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493119.5 |
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| CDS GCA 72 bp | TGCGGTTCCCTCGGGAGAGGGGCGGAGGCTCAGAGGTaGACCACGTGGGGTTTGCTGCCGGAGCGGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CGSLGRGAEAQR*TTWGLLPERSL Trigger: GAGACTCCGCTCCGGCAGCAAACCCCACGTGGTGCACCTCTGAGCCTCCGCCCCTCTCCCGAGGGAACCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493119.5 |
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| CDS TCA 72 bp | CTGCAGATAGACAAGGCGAAGGTCAGCAAAGTCAAATaGAATCTGGTTTGCCCTTTCCTTACCCCCGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LQIDKAKVSKVK*NLVCPFLTPAR Trigger: CCTGGCGGGGGTAAGGAAAGGGCAAACCAGATTTCATTTGACTTTGCTGACCTTCGCCTTGTCTATCTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464154.1 |
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