Pregenerated sensors for ATP5MK (Homo sapiens)
Ensembl gene IDs: ENSG00000173915Ensembl transcript IDs: ENST00000337003.4, ENST00000369811.5, ENST00000369815.6, ENST00000369825.6
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCATGACCGCCTATCTACCACGACCGACGCCACGCCGAGTCGATTaGCAACACAGACGAGCCGGTCGAGGTCCGGTCGAGATTGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: CMTAYLPRPTPRRVD*QHRRAGRGPVEIGR Trigger: CCTACCAATCTCGACCGGACCTCGACCGGCTCGTCTGTGTTGCCAATCGACTCGGCGTGGCGTCGGTCGTGGTAGATAGGCGGTCATGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000337003.4 ENST00000369825.6 |
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| CDS CCA 90 bp | AGCTCGGTGGGAACAAACAGCTGCCAAAGCCGCAAATTCCGCAGCTaGTGTCCTTCAACGAATGTAACCACCTCTCGGCCCGGCCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSVGTNSCQSRKFRS*CPSTNVTTSRPGRK Trigger: CTTCCGGCCGGGCCGAGAGGTGGTTACATTCGTTGAAGGACACCAGCTGCGGAATTTGCGGCTTTGGCAGCTGTTTGTTCCCACCGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369825.6 |
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| CDS TCA 90 bp | CGTATTCAAAAGGTCACCAGAACAAGAGCTGAAAATTCGTATGCATaGCCGCCTATCTACCACGACCGACGCCACGCCGAGTCGATTGGC | + |
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Preference number: 5 (lower is better) Translates to: RIQKVTRTRAENSYA*PPIYHDRRHAESIG Trigger: GCCAATCGACTCGGCGTGGCGTCGGTCGTGGTAGATAGGCGGTCATGCATACGAATTTTCAGCTCTTGTTCTGGTGACCTTTTGAATACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000337003.4 ENST00000369825.6 |
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| CDS TCA 90 bp | TCTTTTATAGACAAGACGTATTCAAAAGGTCACCAGAACAAGAGCTaGAAATTCGTATGCATGACCGCCTATCTACCACGACCGACGCCA | + |
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Preference number: 5 (lower is better) Translates to: SFIDKTYSKGHQNKS*KFVCMTAYLPRPTP Trigger: TGGCGTCGGTCGTGGTAGATAGGCGGTCATGCATACGAATTTTCAGCTCTTGTTCTGGTGACCTTTTGAATACGTCTTGTCTATAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000337003.4 ENST00000369825.6 |
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| CDS CCA 72 bp | GCCTATCTACCACGACCGACGCCACGCCGAGTCGATTaGCAACACAGACGAGCCGGTCGAGGTCCGGTCGAG | + |
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Preference number: 6 (lower is better) Translates to: AYLPRPTPRRVD*QHRRAGRGPVE Trigger: CTCGACCGGACCTCGACCGGCTCGTCTGTGTTGCCAATCGACTCGGCGTGGCGTCGGTCGTGGTAGATAGGC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000337003.4 ENST00000369825.6 |
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| CDS CAA 72 bp | CGCCTATCTACCACGACCGACGCCACGCCGAGTCGATaGGCAACACAGACGAGCCGGTCGAGGTCCGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: RLSTTTDATPSR*ATQTSRSRSGR Trigger: TCGACCGGACCTCGACCGGCTCGTCTGTGTTGCCAATCGACTCGGCGTGGCGTCGGTCGTGGTAGATAGGCG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000337003.4 ENST00000369825.6 |
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| CDS GCA 72 bp | AGGGGCCGGGCCACATTCACTCGCTTTGAAAAAGGCTaGAGCGCACCTAAAGGAGGCCCGGCTGGCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RGRATFTRFEKG*SAPKGGPAGQL Trigger: AAGCTGGCCAGCCGGGCCTCCTTTAGGTGCGCTGCAGCCTTTTTCAAAGCGAGTGAATGTGGCCCGGCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000369811.5 ENST00000369815.6 ENST00000369825.6 |
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| CDS CAA 72 bp | GGCAACACAGACGAGCCGGTCGAGGTCCGGTCGAGATaGGTAGGCAGTGACAGTGACTCAGCTGGGTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GNTDEPVEVRSR*VGSDSDSAGSA Trigger: GGCAGACCCAGCTGAGTCACTGTCACTGCCTACCAATCTCGACCGGACCTCGACCGGCTCGTCTGTGTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337003.4 |
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| CDS CAA 72 bp | GGCAACACAGACGAGCCGGTCGAGGTCCGGTCGAGATaGGTAGGCAGTGACAGTGACTCAGCTGGGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GNTDEPVEVRSR*VGSDSDSAGSG Trigger: TCCAGACCCAGCTGAGTCACTGTCACTGCCTACCAATCTCGACCGGACCTCGACCGGCTCGTCTGTGTTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369825.6 |
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| CDS CAA 90 bp | GAGTCGATTGGCAACACAGACGAGCCGGTCGAGGTCCGGTCGAGATaGGTAGGCAGTGACAGTGACTCAGCTGGGTCTGCCAAAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: ESIGNTDEPVEVRSR*VGSDSDSAGSAKAA Trigger: TGCGGCTTTGGCAGACCCAGCTGAGTCACTGTCACTGCCTACCAATCTCGACCGGACCTCGACCGGCTCGTCTGTGTTGCCAATCGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337003.4 |
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| CDS CAA 90 bp | GAGTCGATTGGCAACACAGACGAGCCGGTCGAGGTCCGGTCGAGATaGGTAGGCAGTGACAGTGACTCAGCTGGGTCTGGAATGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ESIGNTDEPVEVRSR*VGSDSDSAGSGMVR Trigger: TCTCACCATTCCAGACCCAGCTGAGTCACTGTCACTGCCTACCAATCTCGACCGGACCTCGACCGGCTCGTCTGTGTTGCCAATCGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369825.6 |
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| CDS TCA 72 bp | AAGGTCACCAGAACAAGAGCTGAAAATTCGTATGCATaGCCGCCTATCTACCACGACCGACGCCACGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: KVTRTRAENSYA*PPIYHDRRHAE Trigger: CTCGGCGTGGCGTCGGTCGTGGTAGATAGGCGGTCATGCATACGAATTTTCAGCTCTTGTTCTGGTGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000337003.4 ENST00000369825.6 |
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| CDS CCA 72 bp | CTTCCTAAAGCACAGCTCGGTGGGAACAAACAGCTATaGACATACAGAAGAAAAGAGGTTAATTCGGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: LPKAQLGGNKQL*TYRRKEVNSAG Trigger: ACCGGCCGAATTAACCTCTTTTCTTCTGTATGTCCATAGCTGTTTGTTCCCACCGAGCTGTGCTTTAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369811.5 |
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