RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP5F1D (Homo sapiens)

Ensembl gene IDs: ENSG00000099624

Ensembl transcript IDs: ENST00000215375.7, ENST00000395633.5, ENST00000588538.5, ENST00000589478.1, ENST00000590265.5, ENST00000591249.5, ENST00000591660.5, ENST00000592624.1, ENST00000614837.1

Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTaGCTCTGCAGGGCAGAGGGGATGGTAAGCGGCCCGTCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: SSSRGGSEAEVNLGG*LCRAEGMVSGPSGW
Trigger: CCAGCCTGACGGGCCGCTTACCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
3UTR-3UTR CCA 90 bp GGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGCTCTGGTGGCCTCCTTaGCAGGCGCGGCTTCCCCAG +
Preference number: 2 (lower is better)
Translates to: GLGAVHPEVAPKLRSTLALWWPP*QARLPQ
Trigger: CTGGGGAAGCCGCGCCTGCCAAGGAGGCCACCAGAG...CGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215375.7
3UTR-3UTR GCA 90 bp GGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGGCAGAAGCCTGCACTaGCCTCTGGTGGCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: GLGAVHPEVAPKLRSTLAGRSLH*PLVASL
Trigger: CAAGGAGGCCACCAGAGGGCAGTGCAGGCTTCTGCC...CGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215375.7
3UTR CCA 72 bp AGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTaGCTCTGCAGGGCAGAGGGGATGGTAAGCGGCCCG +
Preference number: 3 (lower is better)
Translates to: RGGSEAEVNLGG*LCRAEGMVSGP
Trigger: CGGGCCGCTTACCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
3UTR TCA 72 bp GGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTaGGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGA +
Preference number: 3 (lower is better)
Translates to: GWGQFIQRWLRS*GQPWRLALQGR
Trigger: TCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215375.7
3UTR-3UTR CAA 90 bp CTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTAAGCTGAGGTCAACCTaGGCGGCTGGCTCGCCTACT +
Preference number: 3 (lower is better)
Translates to: LGAVHPEVAPKLRSTLAAKLRST*AAGSPT
Trigger: AGTAGGCGAGCCAGCCGCCAAGGTTGACCTCAGCTT...AGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591249.5
3UTR CCA 72 bp TGGCAGCCACAGCTCAAAGCTGAGGAGGAGCTTCCCTaGCCCAGTCCCCAGAGCTTTCAACACAGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: WQPQLKAEEELP*PSPQSFQHRQG
Trigger: GCCCTGCCTGTGTTGAAAGCTCTGGGGACTGGGCCAGGGAAGCTCCTCCTCAGCTTTGAGCTGTGGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR CCA 90 bp GTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGACGCGGCTTCCCCAGGTaGCCGGGACCCCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VAPKLRSTLAAGSAGQRGRGFPR*PGPQEL
Trigger: CAGCTCCTGGGGTCCCGGCCACCTGGGGAAGCCGCG...TCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR CCA 90 bp CCCTCTGGTGGCCTCCTTGGCAGGCGCGGCTTCCCCAGGTGGCCGGGACCCCAGGAGGAGGAGCTTCCCTaGCCCAGTCCCCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PSGGLLGRRGFPRWPGPQEEELP*PSPQSF
Trigger: AAAGCTCTGGGGACTGGGCCAGGGAAGCTCCTCCTC...CTGGGGTCCCGGCCACCTGGGGAAGCCGCGCCTGCCAAGGAGGCCACCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR GCA 90 bp GGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGCGTGGGCCGCCAGGATaGCGAAGGCTCCGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GSEAEVNLGGWLCRAEGMRGPPG*RRLRSA
Trigger: CGCTGACCGGAGCCTTCGGCATCCTGGCGGCCCACG...CATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp GGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGCGTGGGCCGCCAGGATaGCGAAGGCTCCGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GLGAVHPEVAPKLRSTLARGPPG*RRLRSA
Trigger: CGCTGACCGGAGCCTTCGGCATCCTGGCGGCCCACG...CGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR GCA 90 bp GGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCGTGGGCCGCCAGGATaGCGAAGGCTCCGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GGSSSRGGSEAEVNLGGWRGPPG*RRLRSA
Trigger: CGCTGACCGGAGCCTTCGGCATCCTGGCGGCCCACG...CCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR GCA 90 bp CCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGGTGCCGTCCTCTGCATaGACCACGACCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PEVAPKLRSTLAAGSAGQVPSSA*TTTSPG
Trigger: GCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCAC...CTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp GGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGGTGCCGTCCTCTGCATaGACCACGACCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSEAEVNLGGWLCRAEGMVPSSA*TTTSPG
Trigger: GCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCAC...CATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGGAGGCTCCGGTCAGCGTaGGCACGTCCACCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: APKLRSTLAAGSAGQRGWRLRSA*ARPPAG
Trigger: TCCGGCAGGTGGACGTGCCCACGCTGACCGGAGCCT...CCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGTGCAGCGTGGGCACGTaGGCCGCCAGGATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GSEAEVNLGGWLCRAEGMCSVGT*AARMPK
Trigger: CTTCGGCATCCTGGCGGCCCACGTGCCCACGCTGCA...CATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGGAGCGGCCCGTCAGGCTaGGGGGATCTTGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: APKLRSTLAAGSAGQRGWSGPSG*GDLERR
Trigger: CCGCCTCTCAAGATCCCCCCAGCCTGACGGGCCGCT...CCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR GCA 90 bp GCGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGTGCCGTCCTCTGCATaGACCACGACCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGAGGSSSRGGSEAEVNLVPSSA*TTTSPG
Trigger: GCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCAC...AAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp GGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGGTGCCGTCCTCTGCATaGACCACGACCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GGSSSRGGSEAEVNLGGWVPSSA*TTTSPG
Trigger: GCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCAC...CCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp GCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGGGGTGGTGCCGTCCTCTaGATGCACCACGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: APKLRSTLAAGSAGQRGWGGAVL*MHHDQP
Trigger: GGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACC...CCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCCAGGAAGCGGGTAGCTaGCGGACAGCGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: AGGSSSRGGSEAEVNLGGQEAGS*RTADSG
Trigger: GCCGGAGTCCGCTGTCCGCCAGCTACCCGCTTCCTG...GCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR CCA 90 bp TCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAAGGCTCCGGTCAGCGTaGGCACGTCCACCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SRGGSEAEVNLGGWLCRARLRSA*ARPPAG
Trigger: TCCGGCAGGTGGACGTGCCCACGCTGACCGGAGCCT...TGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGAGGCTCCGGTCAGCGTaGGCACGTCCACCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GLGAVHPEVAPKLRSTLARLRSA*ARPPAG
Trigger: TCCGGCAGGTGGACGTGCCCACGCTGACCGGAGCCT...CGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR CCA 90 bp CGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGTGCAGCGTGGGCACGTaGGCCGCCAGGATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: RGLGAVHPEVAPKLRSTLCSVGT*AARMPK
Trigger: CTTCGGCATCCTGGCGGCCCACGTGCCCACGCTGCA...CAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp GGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTGCAGCGTGGGCACGTaGGCCGCCAGGATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GAVHPEVAPKLRSTLAAGCSVGT*AARMPK
Trigger: CTTCGGCATCCTGGCGGCCCACGTGCCCACGCTGCA...GCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp CCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGGTCAACCTTGGCGGCTaGCTCTGCAGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PEVAPKLRSTLAAGSAGQVNLGG*LCRAEG
Trigger: CCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGAC...CTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR TCA 90 bp GGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGGGACGTTGGCACCGTTaGAGAACACCTGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGSEAEVNLGGWLCRAEGGRWHR*RTPAWE
Trigger: CTCCCACGCAGGTGTTCTTCAACGGTGCCAACGTCC...CCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp GGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCGTGGGCACGTCCACCTaGCGGACGTTGGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: GAVHPEVAPKLRSTLAAGVGTST*RTLAPL
Trigger: CAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCAC...GCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR GCA 90 bp GCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCGGTGGTGCCGTCCTCTaGATGCACCACGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGGSSSRGGSEAEVNLGGGGAVL*MHHDQP
Trigger: GGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACC...GCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp TCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGCAGGAAGCGGGTAGCTaGCGGACAGCGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: SSRGGSEAEVNLGGWLCRQEAGS*RTADSG
Trigger: GCCGGAGTCCGCTGTCCGCCAGCTACCCGCTTCCTG...CCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR CCA 90 bp GGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGCGTGGGCACGTaGGCCGCCAGGATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GSSSRGGSEAEVNLGGWLCSVGT*AARMPK
Trigger: CTTCGGCATCCTGGCGGCCCACGTGCCCACGCTGCA...GAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp GAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGCCCACCAGCTCCGCCTaGGCCTTCTCCAAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: EVAPKLRSTLAAGSAGQRPTSSA*AFSKFA
Trigger: GGCAAACTTGGAGAAGGCCCAGGCGGAGCTGGTGGG...CCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGGCCTCGATTCGGATCTaGATCTCTGCCCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GSEAEVNLGGWLCRAEGMASIRI*ISARVA
Trigger: GGCCACGCGGGCAGAGATCCAGATCCGAATCGAGGC...CATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp CTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTCTCTGGTGGCCTCCTTaGCAGGCGCGGCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGAVHPEVAPKLRSTLAALWWPP*QARLPQ
Trigger: CTGGGGAAGCCGCGCCTGCCAAGGAGGCCACCAGAG...AGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR CCA 90 bp GCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCGTCAACCTTGGCGGCTaGCTCTGCAGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGGSSSRGGSEAEVNLGGVNLGG*LCRAEG
Trigger: CCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGAC...GCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR TCA 90 bp AGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGCCACAGCTCAAAGCTaGGGAGGAGCTTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RGGSEAEVNLGGWLCRAEATAQS*GGASLA
Trigger: GGCCAGGGAAGCTCCTCCTCAGCTTTGAGCTGTGGC...CTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR GCA 90 bp AGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGCCGGTGGTGCCGTCCTCTaGATGCACCACGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: SSSRGGSEAEVNLGGWLAGGAVL*MHHDQP
Trigger: GGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACC...GGCGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS-3UTR GCA 90 bp GGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGAGAGTCGGCGTTCACTaGGATGGAACCGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: GGSEAEVNLGGWLCRAEGRVGVH*DGTAAH
Trigger: GTGAGCAGCGGTTCCATCGCAGTGAACGCCGACTCT...CCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp GCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTCGGATCTGGATCTCTaGCCGCGTGGCCTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: AGGSSSRGGSEAEVNLGGSDLDL*PRGLVS
Trigger: GCTGACGAGGCCACGCGGGCAGAGATCCAGATCCGA...GCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp AGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGTCGGATCTGGATCTCTaGCCGCGTGGCCTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RGGSEAEVNLGGWLCRAESDLDL*PRGLVS
Trigger: GCTGACGAGGCCACGCGGGCAGAGATCCAGATCCGA...CTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp AGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGCCCACCAGCTCCGCCTaGGCCTTCTCCAAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RGGSEAEVNLGGWLCRAEPTSSA*AFSKFA
Trigger: GGCAAACTTGGAGAAGGCCCAGGCGGAGCTGGTGGG...CTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp CGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCCTCGATTCGGATCTaGATCTCTGCCCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RGLGAVHPEVAPKLRSTLASIRI*ISARVA
Trigger: GGCCACGCGGGCAGAGATCCAGATCCGAATCGAGGC...CAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp GCGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGCCTCGATTCGGATCTaGATCTCTGCCCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGAGGSSSRGGSEAEVNLASIRI*ISARVA
Trigger: GGCCACGCGGGCAGAGATCCAGATCCGAATCGAGGC...AAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp TCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGCCTACTCCGCCTCGATTCGGATCTaGATCTCTGCCCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRGGSEAEVNLGGWLAYSASIRI*ISARVA
Trigger: GGCCACGCGGGCAGAGATCCAGATCCGAATCGAGGC...GGAGTAGGCGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS-3UTR CCA 90 bp GGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGTCACCAGGGCCTCGTTaGCCTCGATTCGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: GGSEAEVNLGGWLCRAEGSPGPR*PRFGSG
Trigger: TCCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGA...CCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp CCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGGGAGAGCCCCATGGGTaGCAGCCACAGCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PEVAPKLRSTLAAGSAGQGEPHG*QPQLKA
Trigger: AGCTTTGAGCTGTGGCTGCCACCCATGGGGCTCTCC...CTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR CCA 90 bp AGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGCGGCCCGTCAGGCTaGGGGGATCGCCTACTCCAG +
Preference number: 4 (lower is better)
Translates to: SSSRGGSEAEVNLGGWLCSGPSG*GDRLLQ
Trigger: CTGGAGTAGGCGATCCCCCCAGCCTGACGGGCCGCT...GCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591660.5
CDS-3UTR TCA 90 bp GGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCGGACGTTGGCACCGTTaGAGAACACCTGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GAVHPEVAPKLRSTLAAGGRWHR*RTPAWE
Trigger: CTCCCACGCAGGTGTTCTTCAACGGTGCCAACGTCC...GCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR TCA 90 bp GGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGACGTTGGCACCGTTaGAGAACACCTGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GAGGSSSRGGSEAEVNLGGRWHR*RTPAWE
Trigger: CTCCCACGCAGGTGTTCTTCAACGGTGCCAACGTCC...GCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR TCA 90 bp GGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCAGGTGGCTCCGAAGCTaGGGTCAACCTTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GSSSRGGSEAEVNLGGWLRWLRS*GQPWRL
Trigger: CAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCT...GAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp CCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGCCGTTGAAGAACACCTaGGTGGGAGAGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PEVAPKLRSTLAAGSAGQPLKNT*VGEAKV
Trigger: CACCTTCGCCTCTCCCACGCAGGTGTTCTTCAACGG...CTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp GTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGACCGTTGAAGAACACCTaGGTGGGAGAGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VAPKLRSTLAAGSAGQRGPLKNT*VGEAKV
Trigger: CACCTTCGCCTCTCCCACGCAGGTGTTCTTCAACGG...TCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp AGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCGTGGGCACGTCCACCTaGCGGACGTTGGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: SSSRGGSEAEVNLGGWLCVGTST*RTLAPL
Trigger: CAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCAC...GCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp GTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGTGGTGCCGTCCTCTaGATGCACCACGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: VHPEVAPKLRSTLAAGSAGGAVL*MHHDQP
Trigger: GGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACC...TGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp GCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGTCGGATCTGGATCTCTaGCCGCGTGGCCTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: AVHPEVAPKLRSTLAAGSSDLDL*PRGLVS
Trigger: GCTGACGAGGCCACGCGGGCAGAGATCCAGATCCGA...CGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp GGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGCGGCGTTCACTGCGATaGAACCGCTGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: GGSEAEVNLGGWLCRAEGRRSLR*NRCSQS
Trigger: ACTTTGTGAGCAGCGGTTCCATCGCAGTGAACGCCG...CCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCCCCACCAGCTCCGCCTaGGCCTTCTCCAAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GSSSRGGSEAEVNLGGWLPTSSA*AFSKFA
Trigger: GGCAAACTTGGAGAAGGCCCAGGCGGAGCTGGTGGG...GAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp CTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTCCCACCAGCTCCGCCTaGGCCTTCTCCAAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LGAVHPEVAPKLRSTLAAPTSSA*AFSKFA
Trigger: GGCAAACTTGGAGAAGGCCCAGGCGGAGCTGGTGGG...AGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp GTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATCACCAGGGCCTCGTTaGCCTCGATTCGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: VAPKLRSTLAAGSAGQRGSPGPR*PRFGSG
Trigger: TCCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGA...TCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAAACACAGGCAGGGCCTaGGGCCCAGGCAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VHPEVAPKLRSTLAAGSANTGRA*GPGRSL
Trigger: CAGGCTTCTGCCTGGGCCCCAGGCCCTGCCTGTGTT...TGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR GCA 90 bp GGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCCCGTTGAAGAACACCTaGGTGGGAGAGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GAVHPEVAPKLRSTLAAGPLKNT*VGEAKV
Trigger: CACCTTCGCCTCTCCCACGCAGGTGTTCTTCAACGG...GCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR GCA 90 bp AGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGAGAGTCGGCGTTCACTaGGATGGAACCGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RGGSEAEVNLGGWLCRAERVGVH*DGTAAH
Trigger: GTGAGCAGCGGTTCCATCGCAGTGAACGCCGACTCT...CTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp CGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGAGAGTCGGCGTTCACTaGGATGGAACCGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RGLGAVHPEVAPKLRSTLRVGVH*DGTAAH
Trigger: GTGAGCAGCGGTTCCATCGCAGTGAACGCCGACTCT...CAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp GGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGAGAGTCGGCGTTCACTaGGATGGAACCGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: GLGAVHPEVAPKLRSTLARVGVH*DGTAAH
Trigger: GTGAGCAGCGGTTCCATCGCAGTGAACGCCGACTCT...CGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp GGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGTCTTCGGCCAACAACTaGACCGAAGAGTCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GSEAEVNLGGWLCRAEGMSSANN*TEESAF
Trigger: GAACGCCGACTCTTCGGTGCAGTTGTTGGCCGAAGA...CATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp GTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCATCGGATCTGGATCTCTaGCCGCGTGGCCTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: VHPEVAPKLRSTLAAGSASDLDL*PRGLVS
Trigger: GCTGACGAGGCCACGCGGGCAGAGATCCAGATCCGA...TGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp GGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGGCCTTCTCCAAGTTTaGCTTGGCCCCAGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: GLGAVHPEVAPKLRSTLAGLLQV*LGPRSN
Trigger: GTTGGACCTGGGGCCAAGGCAAACTTGGAGAAGGCC...CGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS-3UTR CCA 90 bp GGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCAAGGTGAAGGACATCTaGTTGGGGCCAGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GAVHPEVAPKLRSTLAAGKVKDI*LGPEAA
Trigger: TGCCGCCTCTGGCCCCAACCAGATGTCCTTCACCTT...GCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR CCA 90 bp TCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAAAGGTGAAGGACATCTaGTTGGGGCCAGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SRGGSEAEVNLGGWLCRAKVKDI*LGPEAA
Trigger: TGCCGCCTCTGGCCCCAACCAGATGTCCTTCACCTT...TGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGTCTCCAAGTTTGCCTTaGCTGCCCCCAGGTCCAACA +
Preference number: 4 (lower is better)
Translates to: EVAPKLRSTLAAGSAGQRSPSLP*LPPGPT
Trigger: TGTTGGACCTGGGGGCAGCCAAGGCAAACTTGGAGA...CCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GCGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTTCACCAGGGCCTCGTTaGCCTCGATTCGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: AGAGGSSSRGGSEAEVNLSPGPR*PRFGSG
Trigger: TCCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGA...AAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp GGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGTCACCAGGGCCTCGTTaGCCTCGATTCGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: GLGAVHPEVAPKLRSTLASPGPR*PRFGSG
Trigger: TCCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGA...CGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp GGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTTCGGCCAACAACTaGACCGAAGAGTCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GAVHPEVAPKLRSTLAAGSSANN*TEESAF
Trigger: GAACGCCGACTCTTCGGTGCAGTTGTTGGCCGAAGA...GCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp GGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGTCTTCGGCCAACAACTaGACCGAAGAGTCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GGSSSRGGSEAEVNLGGWSSANN*TEESAF
Trigger: GAACGCCGACTCTTCGGTGCAGTTGTTGGCCGAAGA...CCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp GCGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTTCTTCGGCCAACAACTaGACCGAAGAGTCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: AGAGGSSSRGGSEAEVNLSSANN*TEESAF
Trigger: GAACGCCGACTCTTCGGTGCAGTTGTTGGCCGAAGA...AAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp GGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCCAAGTTTGCCTTGGCTaGCCCCAGGTCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: GAGGSSSRGGSEAEVNLGQVCLG*PQVQHV
Trigger: GACATGTTGGACCTGGGGGCAGCCAAGGCAAACTTG...GCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR GCA 90 bp GCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCCAAGTTTGCCTTGGCTaGCCCCAGGTCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: AGGSSSRGGSEAEVNLGGQVCLG*PQVQHV
Trigger: GACATGTTGGACCTGGGGGCAGCCAAGGCAAACTTG...GCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR GCA 90 bp TCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCACAAGTTTGCCTTGGCTaGCCCCAGGTCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: SRGGSEAEVNLGGWLCRAQVCLG*PQVQHV
Trigger: GACATGTTGGACCTGGGGGCAGCCAAGGCAAACTTG...TGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCAAGGTGAAGGACATCTaGTTGGGGCCAGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GSSSRGGSEAEVNLGGWLKVKDI*LGPEAA
Trigger: TGCCGCCTCTGGCCCCAACCAGATGTCCTTCACCTT...GAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR CCA 90 bp GGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCCGGCGTTCACTGCGATaGAACCGCTGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: GAGGSSSRGGSEAEVNLGRRSLR*NRCSQS
Trigger: ACTTTGTGAGCAGCGGTTCCATCGCAGTGAACGCCG...GCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp GGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCGGCGTTCACTGCGATaGAACCGCTGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: GGSSSRGGSEAEVNLGGWRRSLR*NRCSQS
Trigger: ACTTTGTGAGCAGCGGTTCCATCGCAGTGAACGCCG...CCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp TCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCATCTCCAAGTTTGCCTTaGCTGCCCCCAGGTCCAACA +
Preference number: 4 (lower is better)
Translates to: SRGGSEAEVNLGGWLCRASPSLP*LPPGPT
Trigger: TGTTGGACCTGGGGGCAGCCAAGGCAAACTTGGAGA...TGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTCCAAGTTTGCCTTaGCTGCCCCCAGGTCCAACA +
Preference number: 4 (lower is better)
Translates to: GAVHPEVAPKLRSTLAAGSPSLP*LPPGPT
Trigger: TGTTGGACCTGGGGGCAGCCAAGGCAAACTTGGAGA...GCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR GCA 90 bp GCGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTAGTATTTGGAGGTGGTaGCGTCCTCTGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: AGAGGSSSRGGSEAEVNLSIWRW*RPLHAP
Trigger: TGGTGCATGCAGAGGACGGCACCACCTCCAAATACT...AAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR GCA 90 bp CCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGCCTACTCCAAGTATTTGGAGGTGGTaGCGTCCTCTGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: PEVAPKLRSTLAAGSPTPSIWRW*RPLHAP
Trigger: TGGTGCATGCAGAGGACGGCACCACCTCCAAATACT...TGGAGTAGGCGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS-3UTR CCA 90 bp GCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGGTGCTCACAAAGTATTTaGAGGTGGTGCCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: APKLRSTLAAGSAGQRGWCSQSI*RWCRPL
Trigger: CAGAGGACGGCACCACCTCCAAATACTTTGTGAGCA...CCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp TCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGCGGCGTTCACTGCGATaGAACCGCTGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: SSRGGSEAEVNLGGWLCRRRSLR*NRCSQS
Trigger: ACTTTGTGAGCAGCGGTTCCATCGCAGTGAACGCCG...CCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR GCA 90 bp TCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGAGTATTTGGAGGTGGTaGCGTCCTCTGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: SSRGGSEAEVNLGGWLCRSIWRW*RPLHAP
Trigger: TGGTGCATGCAGAGGACGGCACCACCTCCAAATACT...CCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp CGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGCAAAGTATTTGGAGGTaGTGCCGTCCTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: RGLGAVHPEVAPKLRSTLQSIWR*CRPLHA
Trigger: TGCATGCAGAGGACGGCACCACCTCCAAATACTTTG...CAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp CATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAAAGTATTTGGAGGTaGTGCCGTCCTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: HPEVAPKLRSTLAAGSAGQSIWR*CRPLHA
Trigger: TGCATGCAGAGGACGGCACCACCTCCAAATACTTTG...CCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp GCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGCTCACAAAGTATTTaGAGGTGGTGCCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGGSSSRGGSEAEVNLGGCSQSI*RWCRPL
Trigger: CAGAGGACGGCACCACCTCCAAATACTTTGTGAGCA...GCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp TCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGCAAAGTATTTGGAGGTaGTGCCGTCCTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: SSRGGSEAEVNLGGWLCRQSIWR*CRPLHA
Trigger: TGCATGCAGAGGACGGCACCACCTCCAAATACTTTG...CCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CCA 90 bp AGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGCCCAAAGTATTTGGAGGTaGTGCCGTCCTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: SSSRGGSEAEVNLGGWLAQSIWR*CRPLHA
Trigger: TGCATGCAGAGGACGGCACCACCTCCAAATACTTTG...GGCGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS-3UTR CCA 90 bp GGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCTCACAAAGTATTTaGAGGTGGTGCCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GSSSRGGSEAEVNLGGWLCSQSI*RWCRPL
Trigger: CAGAGGACGGCACCACCTCCAAATACTTTGTGAGCA...GAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CCA 90 bp AGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGCCTGCTCACAAAGTATTTaGAGGTGGTGCCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSSRGGSEAEVNLGGWLACSQSI*RWCRPL
Trigger: CAGAGGACGGCACCACCTCCAAATACTTTGTGAGCA...GGCGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS TCA 90 bp GGGTCCCGACCCGCAGCGCCCGAACCTGCGTGGGAGAGGCGAAGGTaGAGGACATCTGGTTGGGGCCAGAGGCGGCAGCCGGGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: GSRPAAPEPAWERRR*RTSGWGQRRQPGRR
Trigger: CCGCCGCCCCGGCTGCCGCCTCTGGCCCCAACCAGATGTCCTTCACCTTCGCCTCTCCCACGCAGGTTCGGGCGCTGCGGGTCGGGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS GCA 90 bp GTGCCGTCCTCTGCATGCACCACGACCAGCCCCGGCCGCAGGACCTaGAGCGTGGGCACGTGGGCCGCCAGGATGCCGAAGGCTCCGGTC +
Preference number: 5 (lower is better)
Translates to: VPSSACTTTSPGRRT*SVGTWAARMPKAPV
Trigger: GACCGGAGCCTTCGGCATCCTGGCGGCCCACGTGCCCACGCTGCAGGTCCTGCGGCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000588538.5
ENST00000590265.5
ENST00000591660.5
ENST00000592624.1
CDS GCA 90 bp CGGGGGCGGCGGCCACGGAGGGTCCCGACCCGCAGCGCCCGAACCTaGGTGGGAGAGGCGAAGGTGAAGGACATCTGGTTGGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RGRRPRRVPTRSART*VGEAKVKDIWLGPE
Trigger: CTCTGGCCCCAACCAGATGTCCTTCACCTTCGCCTCTCCCACGCAGGTTCGGGCGCTGCGGGTCGGGACCCTCCGTGGCCGCCGCCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS-3UTR CAA 90 bp CCCTCTGGTGGCCTCCTTGGCAGGCGCGGCTTCCCCAGGTGGCCGGGACCCCAGCGGACGTTGGCACCGTaGAAGAACACCTGCGTGGGA +
Preference number: 5 (lower is better)
Translates to: PSGGLLGRRGFPRWPGPQRTLAP*KNTCVG
Trigger: TCCCACGCAGGTGTTCTTCAACGGTGCCAACGTCCG...CTGGGGTCCCGGCCACCTGGGGAAGCCGCGCCTGCCAAGGAGGCCACCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS GCA 90 bp GCCGCCAGGATGCCGAAGGCTCCGGTCAGCGTGGGCACGTCCACCTaGCGGACGTTGGCACCGTTGAAGAACACCTGCGTGGGAGAGGCG +
Preference number: 5 (lower is better)
Translates to: AARMPKAPVSVGTST*RTLAPLKNTCVGEA
Trigger: CGCCTCTCCCACGCAGGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCACGCTGACCGGAGCCTTCGGCATCCTGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591660.5
CDS GCA 90 bp GGCCTTCACCAGGGCCTCGTTGGCCTCGATTCGGATCTGGATCTCTaGCCGCGTGGCCTCGTCAGCTGTCCCCACCAGCTCCGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GLHQGLVGLDSDLDL*PRGLVSCPHQLRLG
Trigger: GCCCAGGCGGAGCTGGTGGGGACAGCTGACGAGGCCACGCGGGCAGAGATCCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGAAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000588538.5
ENST00000589478.1
ENST00000590265.5
ENST00000591249.5
ENST00000591660.5
ENST00000614837.1
CDS-3UTR CAA 90 bp GGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGGTGAAGGACATCTGGTaGGGGCCAGAGGCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GGSEAEVNLGGWLCRAEGVKDIW*GPEAAA
Trigger: GGCTGCCGCCTCTGGCCCCAACCAGATGTCCTTCAC...CCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CAA 90 bp GGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGCCTCTGGTGGCCTCCTaGGCAGGCGCGGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: GLGAVHPEVAPKLRSTLAPLVAS*AGAASP
Trigger: TGGGGAAGCCGCGCCTGCCAAGGAGGCCACCAGAGG...CGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS GCA 90 bp GGCCCTGCAGCCCTCCACCGGACTCACCAAAGTATTTGGAGGTGGTaGCGTCCTCTGCATGCACCACGACCAGCCCCGGCCGCAGGACCT +
Preference number: 5 (lower is better)
Translates to: GPAALHRTHQSIWRW*RPLHAPRPAPAAGP
Trigger: AGGTCCTGCGGCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACCTCCAAATACTTTGGTGAGTCCGGTGGAGGGCTGCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592624.1
CDS CCA 90 bp CCTGGCCCTGCAGCCCTCCACCGGACTCACCAAAGTATTTGGAGGTaGTGCCGTCCTCTGCATGCACCACGACCAGCCCCGGCCGCAGGA +
Preference number: 5 (lower is better)
Translates to: PGPAALHRTHQSIWR*CRPLHAPRPAPAAG
Trigger: TCCTGCGGCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACCTCCAAATACTTTGGTGAGTCCGGTGGAGGGCTGCAGGGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592624.1
CDS GCA 90 bp GCCGCCAGGATGCCGAAGGCTCCGGTCAGCGTGGGCACGTCCACCTaGCGGACGTTGGCACCGTTGAAGAACACCTGCAGACAACAGCGT +
Preference number: 5 (lower is better)
Translates to: AARMPKAPVSVGTST*RTLAPLKNTCRQQR
Trigger: ACGCTGTTGTCTGCAGGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCACGCTGACCGGAGCCTTCGGCATCCTGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS-3UTR CAA 90 bp GGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCGTGAAGGACATCTGGTaGGGGCCAGAGGCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GAVHPEVAPKLRSTLAAGVKDIW*GPEAAA
Trigger: GGCTGCCGCCTCTGGCCCCAACCAGATGTCCTTCAC...GCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR CAA 90 bp GTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGAAAGCTGAGGTCAACCTaGGCGGCTGGCTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: VAPKLRSTLAAGSAGQRGKLRST*AAGSAG
Trigger: CCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTT...TCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS TCA 90 bp CTCCGGTCAGCGTGGGCACGTCCACCTGCCGGACGTTGGCACCGTTaGAGAACACCTGCAGACAACAGCGTGGGGAATGATGGCGGGGCA +
Preference number: 5 (lower is better)
Translates to: LRSAWARPPAGRWHR*RTPADNSVGNDGGA
Trigger: TGCCCCGCCATCATTCCCCACGCTGTTGTCTGCAGGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCACGCTGACCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CCA 90 bp ATCTCTGCCCGCGTGGCCTCGTCAGCTGTCCCCACCAGCTCCGCCTaGGCCTTCTCCAAGTTTGCCTTGGCCCCAGGTCCAACATGTCCA +
Preference number: 5 (lower is better)
Translates to: ISARVASSAVPTSSA*AFSKFALAPGPTCP
Trigger: TGGACATGTTGGACCTGGGGCCAAGGCAAACTTGGAGAAGGCCCAGGCGGAGCTGGTGGGGACAGCTGACGAGGCCACGCGGGCAGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS-3UTR CAA 90 bp GCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATGGCGGACGTTGGCACCGTaGAAGAACACCTGCGTGGGA +
Preference number: 5 (lower is better)
Translates to: APKLRSTLAAGSAGQRGWRTLAP*KNTCVG
Trigger: TCCCACGCAGGTGTTCTTCAACGGTGCCAACGTCCG...CCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CAA 90 bp GTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGATCCACCTGCCGGACGTaGGCACCGTTGAAGAACACC +
Preference number: 5 (lower is better)
Translates to: VAPKLRSTLAAGSAGQRGSTCRT*APLKNT
Trigger: GGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGA...TCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CAA 90 bp GGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGGGTTCTCCAAGTTTGCCTaGGCTGCCCCCAGGTCCAAC +
Preference number: 5 (lower is better)
Translates to: GGSEAEVNLGGWLCRAEGFSKFA*AAPRSN
Trigger: GTTGGACCTGGGGGCAGCCAAGGCAAACTTGGAGAA...CCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CAA 90 bp CCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGTTCACCAGGGCCTCGTaGGCCTCGATTCGGATCTGG +
Preference number: 5 (lower is better)
Translates to: PEVAPKLRSTLAAGSAGQFTRAS*ASIRIW
Trigger: CCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGAA...CTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CAA 90 bp GGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGAAGCTGAGGTCAACCTaGGCGGCTGGCTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GGSSSRGGSEAEVNLGGWKLRST*AAGSAG
Trigger: CCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTT...CCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215375.7
CDS-3UTR CAA 90 bp GCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCCGGACGTTGGCACCGTaGAAGAACACCTGCGTGGGA +
Preference number: 5 (lower is better)
Translates to: AGGSSSRGGSEAEVNLGGRTLAP*KNTCVG
Trigger: TCCCACGCAGGTGTTCTTCAACGGTGCCAACGTCCG...GCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR CAA 90 bp AGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGTCCACCTGCCGGACGTaGGCACCGTTGAAGAACACC +
Preference number: 5 (lower is better)
Translates to: RGGSEAEVNLGGWLCRAESTCRT*APLKNT
Trigger: GGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGA...CTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CAA 90 bp GAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCAGGGCAGAGGTTCTCCAAGTTTGCCTaGGCTGCCCCCAGGTCCAAC +
Preference number: 5 (lower is better)
Translates to: EVAPKLRSTLAAGSAGQRFSKFA*AAPRSN
Trigger: GTTGGACCTGGGGGCAGCCAAGGCAAACTTGGAGAA...CCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CAA 90 bp GCGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTTTCACCAGGGCCTCGTaGGCCTCGATTCGGATCTGG +
Preference number: 5 (lower is better)
Translates to: AGAGGSSSRGGSEAEVNLFTRAS*ASIRIW
Trigger: CCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGAA...AAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CAA 90 bp GGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCAAGCTGAGGTCAACCTaGGCGGCTGGCTCGCCTACT +
Preference number: 5 (lower is better)
Translates to: GAGGSSSRGGSEAEVNLGKLRST*AAGSPT
Trigger: AGTAGGCGAGCCAGCCGCCAAGGTTGACCTCAGCTT...GCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CAA 90 bp CCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGCCTACTCCAAAGCTGAGGTCAACCTaGGCGGCTGGCTCGCCTACT +
Preference number: 5 (lower is better)
Translates to: PEVAPKLRSTLAAGSPTPKLRST*AAGSPT
Trigger: AGTAGGCGAGCCAGCCGCCAAGGTTGACCTCAGCTT...TGGAGTAGGCGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS-3UTR CAA 90 bp GGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGGGCCTTCTCCAAGTTaGCCTTGGCCCCAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: GLGAVHPEVAPKLRSTLAGPSPS*PWPQVQ
Trigger: TTGGACCTGGGGCCAAGGCAAACTTGGAGAAGGCCC...CGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS-3UTR CAA 90 bp CTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTTCCACCTGCCGGACGTaGGCACCGTTGAAGAACACC +
Preference number: 5 (lower is better)
Translates to: LGAVHPEVAPKLRSTLAASTCRT*APLKNT
Trigger: GGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGA...AGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR CAA 90 bp GCGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTTTCTCCAAGTTTGCCTaGGCTGCCCCCAGGTCCAAC +
Preference number: 5 (lower is better)
Translates to: AGAGGSSSRGGSEAEVNLFSKFA*AAPRSN
Trigger: GTTGGACCTGGGGGCAGCCAAGGCAAACTTGGAGAA...AAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000395633.5
CDS-3UTR CAA 90 bp GGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTTCACCAGGGCCTCGTaGGCCTCGATTCGGATCTGG +
Preference number: 5 (lower is better)
Translates to: GSSSRGGSEAEVNLGGWLFTRAS*ASIRIW
Trigger: CCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGAA...GAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CAA 90 bp GCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGTTCACCAGGGCCTCGTaGGCCTCGATTCGGATCTGG +
Preference number: 5 (lower is better)
Translates to: AVHPEVAPKLRSTLAAGSFTRAS*ASIRIW
Trigger: CCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGAA...CGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395633.5
ENST00000591249.5
CDS GCA 90 bp CCCAGGTCCAACATGTCCAGCGTCACGGCCTCTTCGGCCAACAACTaGACCGAAGAGTCGGCGTTCACTGCGATGGAACCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: PRSNMSSVTASSANN*TEESAFTAMEPLLT
Trigger: TGTGAGCAGCGGTTCCATCGCAGTGAACGCCGACTCTTCGGTGCAGTTGTTGGCCGAAGAGGCCGTGACGCTGGACATGTTGGACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000588538.5
ENST00000590265.5
ENST00000591249.5
ENST00000591660.5
CDS GCA 90 bp CCCAGGTCCAACATGTCCAGCGTCACGGCCTCTTCGGCCAACAACTaGACCGAAGAGTCGGCGTTCACTGCGATGGAACCGCTGCTCACT +
Preference number: 5 (lower is better)
Translates to: PRSNMSSVTASSANN*TEESAFTAMEPLLT
Trigger: AGTGAGCAGCGGTTCCATCGCAGTGAACGCCGACTCTTCGGTGCAGTTGTTGGCCGAAGAGGCCGTGACGCTGGACATGTTGGACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589478.1
ENST00000614837.1
CDS-3UTR CAA 90 bp GGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTGCTCACAAAGTATTaGGAGGTGGTGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: GGSSSRGGSEAEVNLGGWLLTKY*EVVPSS
Trigger: AGAGGACGGCACCACCTCCAAATACTTTGTGAGCAG...CCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CAA 90 bp GGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCTTCTCCAAGTTTGCCTaGGCCCCAGGTCCAACATGT +
Preference number: 5 (lower is better)
Translates to: GAGGSSSRGGSEAEVNLGFSKFA*APGPTC
Trigger: ACATGTTGGACCTGGGGCCAAGGCAAACTTGGAGAA...GCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGCCCCCAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS-3UTR CAA 90 bp GCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGCTGCTCACAAAGTATTaGGAGGTGGTGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: AVHPEVAPKLRSTLAAGSLLTKY*EVVPSS
Trigger: AGAGGACGGCACCACCTCCAAATACTTTGTGAGCAG...CGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395633.5
ENST00000591249.5
CDS-3UTR CAA 90 bp GTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCACTGCTCACAAAGTATTaGGAGGTGGTGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: VHPEVAPKLRSTLAAGSALLTKY*EVVPSS
Trigger: AGAGGACGGCACCACCTCCAAATACTTTGTGAGCAG...TGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS-3UTR CAA 90 bp AGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCTGCCTGCTCACAAAGTATTaGGAGGTGGTGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: SSSRGGSEAEVNLGGWLCLLTKY*EVVPSS
Trigger: AGAGGACGGCACCACCTCCAAATACTTTGTGAGCAG...GCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCACCTCTGGATGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215375.7
ENST00000591660.5
CDS TCA 90 bp TCCGAAGTTGCAGCTTTGGTCCTCAACAGTTGCGCCTCATTCTACTaGTCCGCGAAATGGGAATGCAACGATCCGGCGACACCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: SEVAALVLNSCASFY*SAKWECNDPATPRL
Trigger: AAGCCTGGGTGTCGCCGGATCGTTGCATTCCCATTTCGCGGATCAGTAGAATGAGGCGCAACTGTTGAGGACCAAAGCTGCAACTTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS GCA 72 bp TCTGCATGCACCACGACCAGCCCCGGCCGCAGGACCTaGAGCGTGGGCACGTGGGCCGCCAGGATGCCGAAG +
Preference number: 6 (lower is better)
Translates to: SACTTTSPGRRT*SVGTWAARMPK
Trigger: CTTCGGCATCCTGGCGGCCCACGTGCCCACGCTGCAGGTCCTGCGGCCGGGGCTGGTCGTGGTGCATGCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000588538.5
ENST00000590265.5
ENST00000591249.5
ENST00000591660.5
ENST00000592624.1
CDS CCA 72 bp CGAACCTGCGTGGGAGAGGCGAAGGTGAAGGACATCTaGTTGGGGCCAGAGGCGGCAGCCGGGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RTCVGEAKVKDI*LGPEAAAGAAA
Trigger: CGCCGCCGCCCCGGCTGCCGCCTCTGGCCCCAACCAGATGTCCTTCACCTTCGCCTCTCCCACGCAGGTTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CCA 72 bp AACACCTGCGTGGGAGAGGCGAAGGTGAAGGACATCTaGTTGGGGCCAGAGGCGGCAGCCGGGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: NTCVGEAKVKDI*LGPEAAAGAAA
Trigger: CGCCGCCGCCCCGGCTGCCGCCTCTGGCCCCAACCAGATGTCCTTCACCTTCGCCTCTCCCACGCAGGTGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591660.5
CDS GCA 72 bp CGGCCACGGAGGGTCCCGACCCGCAGCGCCCGAACCTaGGTGGGAGAGGCGAAGGTGAAGGACATCTGGTTG +
Preference number: 6 (lower is better)
Translates to: RPRRVPTRSART*VGEAKVKDIWL
Trigger: CAACCAGATGTCCTTCACCTTCGCCTCTCCCACGCAGGTTCGGGCGCTGCGGGTCGGGACCCTCCGTGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CCA 72 bp CGCGTGGCCTCGTCAGCTGTCCCCACCAGCTCCGCCTaGGCCTTCTCCAAGTTTGCCTTGGCCCCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: RVASSAVPTSSA*AFSKFALAPGP
Trigger: TGGACCTGGGGCCAAGGCAAACTTGGAGAAGGCCCAGGCGGAGCTGGTGGGGACAGCTGACGAGGCCACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591249.5
CDS CAA 72 bp GCTCCGGTCAGCGTGGGCACGTCCACCTGCCGGACGTaGGCACCGTTGAAGAACACCTGCGTGGGAGAGGCG +
Preference number: 6 (lower is better)
Translates to: APVSVGTSTCRT*APLKNTCVGEA
Trigger: CGCCTCTCCCACGCAGGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCACGCTGACCGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591660.5
CDS GCA 72 bp CAGGGCCTCGTTGGCCTCGATTCGGATCTGGATCTCTaGCCGCGTGGCCTCGTCAGCTGTCCCCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: QGLVGLDSDLDL*PRGLVSCPHQL
Trigger: GAGCTGGTGGGGACAGCTGACGAGGCCACGCGGGCAGAGATCCAGATCCGAATCGAGGCCAACGAGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000588538.5
ENST00000589478.1
ENST00000590265.5
ENST00000591249.5
ENST00000591660.5
ENST00000614837.1
CDS GCA 72 bp ATGCCGAAGGCTCCGGTCAGCGTGGGCACGTCCACCTaGCGGACGTTGGCACCGTTGAAGAACACCTGCGTG +
Preference number: 6 (lower is better)
Translates to: MPKAPVSVGTST*RTLAPLKNTCV
Trigger: CACGCAGGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCACGCTGACCGGAGCCTTCGGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000591660.5
CDS GCA 72 bp GCCCTCCACCGGACTCACCAAAGTATTTGGAGGTGGTaGCGTCCTCTGCATGCACCACGACCAGCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: ALHRTHQSIWRW*RPLHAPRPAPA
Trigger: GGCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACCTCCAAATACTTTGGTGAGTCCGGTGGAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592624.1
CDS GCA 72 bp GCTGCTCACAAAGTATTTGGAGGTGGTGCCGTCCTCTaGATGCACCACGACCAGCCCCGGCCGCAGGACCTG +
Preference number: 6 (lower is better)
Translates to: AAHKVFGGGAVL*MHHDQPRPQDL
Trigger: CAGGTCCTGCGGCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACCTCCAAATACTTTGTGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000588538.5
ENST00000590265.5
ENST00000591249.5
ENST00000591660.5
CDS GCA 72 bp ATGCCGAAGGCTCCGGTCAGCGTGGGCACGTCCACCTaGCGGACGTTGGCACCGTTGAAGAACACCTGCAGA +
Preference number: 6 (lower is better)
Translates to: MPKAPVSVGTST*RTLAPLKNTCR
Trigger: TCTGCAGGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCACGCTGACCGGAGCCTTCGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS GCA 72 bp GGACTCACCAAAGTATTTGGAGGTGGTGCCGTCCTCTaGATGCACCACGACCAGCCCCGGCCGCAGGACCTG +
Preference number: 6 (lower is better)
Translates to: GLTKVFGGGAVL*MHHDQPRPQDL
Trigger: CAGGTCCTGCGGCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACCTCCAAATACTTTGGTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592624.1
CDS CCA 72 bp AAATGGGAATGCAACGATCCGGCGACACCCAGGCTTTaGCCAGGGAGATCGGGGAGGGCACCCAGGAGACGC +
Preference number: 6 (lower is better)
Translates to: KWECNDPATPRL*PGRSGRAPRRR
Trigger: GCGTCTCCTGGGTGCCCTCCCCGATCTCCCTGGCCAAAGCCTGGGTGTCGCCGGATCGTTGCATTCCCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CCA 72 bp GCAGCCCTCCACCGGACTCACCAAAGTATTTGGAGGTaGTGCCGTCCTCTGCATGCACCACGACCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: AALHRTHQSIWR*CRPLHAPRPAP
Trigger: CGGGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACCTCCAAATACTTTGGTGAGTCCGGTGGAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592624.1
CDS CAA 72 bp GAAATGGGAATGCAACGATCCGGCGACACCCAGGCTTaGGCCAGGGAGATCGGGGAGGGCACCCAGGAGACG +
Preference number: 6 (lower is better)
Translates to: EMGMQRSGDTQA*AREIGEGTQET
Trigger: CGTCTCCTGGGTGCCCTCCCCGATCTCCCTGGCCAAAGCCTGGGTGTCGCCGGATCGTTGCATTCCCATTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CAA 72 bp GCTCCGGTCAGCGTGGGCACGTCCACCTGCCGGACGTaGGCACCGTTGAAGAACACCTGCAGACAACAGCGT +
Preference number: 6 (lower is better)
Translates to: APVSVGTSTCRT*APLKNTCRQQR
Trigger: ACGCTGTTGTCTGCAGGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCACGCTGACCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CAA 90 bp CTGATCCGCGAAATGGGAATGCAACGATCCGGCGACACCCAGGCTTaGGCCAGGGAGATCGGGGAGGGCACCCAGGAGACGCTTATCTCG +
Preference number: 6 (lower is better)
Translates to: LIREMGMQRSGDTQA*AREIGEGTQETLIS
Trigger: CGAGATAAGCGTCTCCTGGGTGCCCTCCCCGATCTCCCTGGCCAAAGCCTGGGTGTCGCCGGATCGTTGCATTCCCATTTCGCGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS TCA 72 bp TGGGTCAGGGCAGGACCTGGCGCTGATGTGAGGCACTaGGACAACCCAGCGCAGGGATCCGAAGTTGCAGCT +
Preference number: 6 (lower is better)
Translates to: WVRAGPGADVRH*DNPAQGSEVAA
Trigger: AGCTGCAACTTCGGATCCCTGCGCTGGGTTGTCTCAGTGCCTCACATCAGCGCCAGGTCCTGCCCTGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS GCA 72 bp CGATGGAACCGCTGCTCACAAAGTATTTGGAGGTGGTaGCGTCCTCTGCATGCACCACGACCAGCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: RWNRCSQSIWRW*RPLHAPRPAPA
Trigger: GGCCGGGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACCTCCAAATACTTTGTGAGCAGCGGTTCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000588538.5
ENST00000590265.5
ENST00000591249.5
ENST00000591660.5
CDS CCA 72 bp GGCCCTGCAGCCCTCCACCGGACTCACCAAAGTATTTaGAGGTGGTGCCGTCCTCTGCATGCACCACGACCA +
Preference number: 6 (lower is better)
Translates to: GPAALHRTHQSI*RWCRPLHAPRP
Trigger: TGGTCGTGGTGCATGCAGAGGACGGCACCACCTCCAAATACTTTGGTGAGTCCGGTGGAGGGCTGCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592624.1
CDS TCA 72 bp GCGTGGGCACGTCCACCTGCCGGACGTTGGCACCGTTaGAGAACACCTGCAGACAACAGCGTGGGGAATGAT +
Preference number: 6 (lower is better)
Translates to: AWARPPAGRWHR*RTPADNSVGND
Trigger: ATCATTCCCCACGCTGTTGTCTGCAGGTGTTCTTCAACGGTGCCAACGTCCGGCAGGTGGACGTGCCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CCA 72 bp CTGCGATGGAACCGCTGCTCACAAAGTATTTGGAGGTaGTGCCGTCCTCTGCATGCACCACGACCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: LRWNRCSQSIWR*CRPLHAPRPAP
Trigger: CGGGGCTGGTCGTGGTGCATGCAGAGGACGGCACCACCTCCAAATACTTTGTGAGCAGCGGTTCCATCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000588538.5
ENST00000590265.5
ENST00000591249.5
ENST00000591660.5
CDS GCA 72 bp AACATGTCCAGCGTCACGGCCTCTTCGGCCAACAACTaGACCGAAGAGTCGGCGTTCACTGCGATGGAACCG +
Preference number: 6 (lower is better)
Translates to: NMSSVTASSANN*TEESAFTAMEP
Trigger: CGGTTCCATCGCAGTGAACGCCGACTCTTCGGTGCAGTTGTTGGCCGAAGAGGCCGTGACGCTGGACATGTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000215375.7
ENST00000395633.5
ENST00000588538.5
ENST00000589478.1
ENST00000590265.5
ENST00000591249.5
ENST00000591660.5
ENST00000614837.1
CDS GCA 72 bp GAGGCACTGAGACAACCCAGCGCAGGGATCCGAAGTTaGAGCTTTGGTCCTCAACAGTTGCGCCTCATTCTA +
Preference number: 6 (lower is better)
Translates to: EALRQPSAGIRS*SFGPQQLRLIL
Trigger: TAGAATGAGGCGCAACTGTTGAGGACCAAAGCTGCAACTTCGGATCCCTGCGCTGGGTTGTCTCAGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CAA 90 bp CAACCCAGCGCAGGGATCCGAAGTTGCAGCTTTGGTCCTCAACAGTaGCGCCTCATTCTACTGATCCGCGAAATGGGAATGCAACGATCC +
Preference number: 6 (lower is better)
Translates to: QPSAGIRSCSFGPQQ*RLILLIREMGMQRS
Trigger: GGATCGTTGCATTCCCATTTCGCGGATCAGTAGAATGAGGCGCAACTGTTGAGGACCAAAGCTGCAACTTCGGATCCCTGCGCTGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CAA 90 bp ACTGGGCCTGGGTGGTTTTACATCTCTTGCTTCGACCATCCTACATaGGTTGGTCCAGAGCCAGTCATAAACCGGCTGAGAGCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: TGPGWFYISCFDHPT*VGPEPVINRLRAGS
Trigger: GGACCCTGCTCTCAGCCGGTTTATGACTGGCTCTGGACCAACCAATGTAGGATGGTCGAAGCAAGAGATGTAAAACCACCCAGGCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592624.1
CDS TCA 72 bp GCAGCTTTGGTCCTCAACAGTTGCGCCTCATTCTACTaGTCCGCGAAATGGGAATGCAACGATCCGGCGACA +
Preference number: 6 (lower is better)
Translates to: AALVLNSCASFY*SAKWECNDPAT
Trigger: TGTCGCCGGATCGTTGCATTCCCATTTCGCGGATCAGTAGAATGAGGCGCAACTGTTGAGGACCAAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CAA 72 bp GGCATGAACCACTGGGCCTGGGTGGTTTTACATCTCTaGCTTCGACCATCCTACATTGGTTGGTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: GMNHWAWVVLHL*LRPSYIGWSRA
Trigger: GGCTCTGGACCAACCAATGTAGGATGGTCGAAGCAAGAGATGTAAAACCACCCAGGCCCAGTGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592624.1
CDS CAA 72 bp GCAGGGATCCGAAGTTGCAGCTTTGGTCCTCAACAGTaGCGCCTCATTCTACTGATCCGCGAAATGGGAATG +
Preference number: 6 (lower is better)
Translates to: AGIRSCSFGPQQ*RLILLIREMGM
Trigger: CATTCCCATTTCGCGGATCAGTAGAATGAGGCGCAACTGTTGAGGACCAAAGCTGCAACTTCGGATCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588538.5
ENST00000590265.5
ENST00000592624.1
CDS CCA 72 bp GTTTTACATCTCTTGCTTCGACCATCCTACATTGGTTaGTCCAGAGCCAGTCATAAACCGGCTGAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: VLHLLLRPSYIG*SRASHKPAESR
Trigger: CCTGCTCTCAGCCGGTTTATGACTGGCTCTGGACCAACCAATGTAGGATGGTCGAAGCAAGAGATGTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592624.1
CDS CAA 72 bp GGGTGGTTTTACATCTCTTGCTTCGACCATCCTACATaGGTTGGTCCAGAGCCAGTCATAAACCGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: GWFYISCFDHPT*VGPEPVINRLR
Trigger: TCTCAGCCGGTTTATGACTGGCTCTGGACCAACCAATGTAGGATGGTCGAAGCAAGAGATGTAAAACCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592624.1