Pregenerated sensors for ATP5F1B (Homo sapiens)
Ensembl gene IDs: ENSG00000110955Ensembl transcript IDs: ENST00000262030.8, ENST00000547250.5, ENST00000547808.5, ENST00000548647.1, ENST00000551020.5, ENST00000551570.5, ENST00000552959.5, ENST00000553007.2
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCCTGACAGGATGGACCGCCGTCGGAGCGGCCCGCAGTAAGAGCTaGGCTGGGGGCAGCGACGCTGAAGGGGTGAGTCTCCGCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SLTGWTAVGAARSKS*AGGSDAEGVSLRKA Trigger: GGCCTTGCGGAGACTCACCCCTTCAGCGTCGCTGCCCCCAGCTCAGCTCTTACTGCGGGCCGCTCCGACGGCGGTCCATCCTGTCAGGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000262030.8 ENST00000547808.5 ENST00000548647.1 ENST00000553007.2 |
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| CDS TCA 90 bp | CTCTCACCAGGATGGACCGCCGTCGGAGCGGCCCGCAGTAAGAGCTaGGCTGGGGGCAGCGACGCTGAAGGGGTGAGTCTCCGCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LSPGWTAVGAARSKS*AGGSDAEGVSLRKA Trigger: GGCCTTGCGGAGACTCACCCCTTCAGCGTCGCTGCCCCCAGCTCAGCTCTTACTGCGGGCCGCTCCGACGGCGGTCCATCCTGGTGAGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000551020.5 ENST00000552959.5 |
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| CDS GCA 90 bp | CACCACTGCGCCAATGACCGCCACGATGCGCCCGGTGGCGGCGCCTaGTTTTGGCGAAGGAGATGTTTGCGCCGCATAGTCCCTGACAGG | + |
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Preference number: 5 (lower is better) Translates to: HHCANDRHDAPGGGA*FWRRRCLRRIVPDR Trigger: CCTGTCAGGGACTATGCGGCGCAAACATCTCCTTCGCCAAAAGCAGGCGCCGCCACCGGGCGCATCGTGGCGGTCATTGGCGCAGTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262030.8 ENST00000547808.5 ENST00000548647.1 ENST00000553007.2 |
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| CDS CCA 90 bp | TGCGCCAATGACCGCCACGATGCGCCCGGTGGCGGCGCCTGCTTTTaGCGAAGGAGATGTTTGCGCCGCATAGTCCCTGACAGGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: CANDRHDAPGGGACF*RRRCLRRIVPDRMD Trigger: GTCCATCCTGTCAGGGACTATGCGGCGCAAACATCTCCTTCGCCAAAAGCAGGCGCCGCCACCGGGCGCATCGTGGCGGTCATTGGCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262030.8 ENST00000547808.5 ENST00000548647.1 ENST00000553007.2 |
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| CDS CCA 90 bp | AAAGATGTTATCAATAAGTTGATAACACCAGATTCAATCATTTCATaGTATAAATCATTGCCTTCACGGGTCCTCTCACCAACACCAGCA | + |
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Preference number: 5 (lower is better) Translates to: KDVINKLITPDSIIS*YKSLPSRVLSPTPA Trigger: TGCTGGTGTTGGTGAGAGGACCCGTGAAGGCAATGATTTATACCATGAAATGATTGAATCTGGTGTTATCAACTTATTGATAACATCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547250.5 |
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| CDS TCA 72 bp | GGATGGACCGCCGTCGGAGCGGCCCGCAGTAAGAGCTaGGCTGGGGGCAGCGACGCTGAAGGGGTGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GWTAVGAARSKS*AGGSDAEGVSL Trigger: GAGACTCACCCCTTCAGCGTCGCTGCCCCCAGCTCAGCTCTTACTGCGGGCCGCTCCGACGGCGGTCCATCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000262030.8 ENST00000547808.5 ENST00000548647.1 ENST00000551020.5 ENST00000552959.5 ENST00000553007.2 |
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| CDS CCA 72 bp | GACCGCCACGATGCGCCCGGTGGCGGCGCCTGCTTTTaGCGAAGGAGATGTTTGCGCCGCATAGTCCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: DRHDAPGGGACF*RRRCLRRIVPD Trigger: GTCAGGGACTATGCGGCGCAAACATCTCCTTCGCCAAAAGCAGGCGCCGCCACCGGGCGCATCGTGGCGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262030.8 ENST00000547808.5 ENST00000548647.1 ENST00000553007.2 |
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| CDS GCA 72 bp | GCCAATGACCGCCACGATGCGCCCGGTGGCGGCGCCTaGTTTTGGCGAAGGAGATGTTTGCGCCGCATAGTC | + |
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Preference number: 6 (lower is better) Translates to: ANDRHDAPGGGA*FWRRRCLRRIV Trigger: GACTATGCGGCGCAAACATCTCCTTCGCCAAAAGCAGGCGCCGCCACCGGGCGCATCGTGGCGGTCATTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262030.8 ENST00000547808.5 ENST00000548647.1 ENST00000553007.2 |
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| CDS CAA 72 bp | CCCGGTGGCGGCGCCTGCTTTTGGCGAAGGAGATGTTaGCGCCGCATAGTCCCTGACAGGATGGACCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: PGGGACFWRRRC*RRIVPDRMDRR Trigger: ACGGCGGTCCATCCTGTCAGGGACTATGCGGCGCAAACATCTCCTTCGCCAAAAGCAGGCGCCGCCACCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262030.8 ENST00000547808.5 ENST00000548647.1 ENST00000553007.2 |
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| CDS CAA 90 bp | AATGCAGACACCTCTGAACCAGCCTTAGAGGTGGCATCTTTTAAGTaGATAACACCAGATTCAATCATTTCATGGTATAAATCATTGCCT | + |
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Preference number: 6 (lower is better) Translates to: NADTSEPALEVASFK*ITPDSIISWYKSLP Trigger: AGGCAATGATTTATACCATGAAATGATTGAATCTGGTGTTATCAACTTAAAAGATGCCACCTCTAAGGCTGGTTCAGAGGTGTCTGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551570.5 |
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| CDS CCA 72 bp | ATCAATAAGTTGATAACACCAGATTCAATCATTTCATaGTATAAATCATTGCCTTCACGGGTCCTCTCACCA | + |
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Preference number: 6 (lower is better) Translates to: INKLITPDSIIS*YKSLPSRVLSP Trigger: TGGTGAGAGGACCCGTGAAGGCAATGATTTATACCATGAAATGATTGAATCTGGTGTTATCAACTTATTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547250.5 |
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| CDS CAA 72 bp | TATACCAGCGCTACCTTAGAGGTGGCATCTTTTAAGTaGATAACACCAGATTCAATCATTTCATGGTATAAA | + |
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Preference number: 6 (lower is better) Translates to: YTSATLEVASFK*ITPDSIISWYK Trigger: TTTATACCATGAAATGATTGAATCTGGTGTTATCAACTTAAAAGATGCCACCTCTAAGGTAGCGCTGGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262030.8 ENST00000552959.5 ENST00000553007.2 |
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