RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP4A (Homo sapiens)

Ensembl gene IDs: ENSG00000105675

Ensembl transcript IDs: ENST00000262623.4, ENST00000590916.1, ENST00000592131.5, ENST00000592767.2

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTaGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGC +
Preference number: 1 (lower is better)
Translates to: SGQLYSLSEPHRHHR*RLSRGQPRGLPRRC
Trigger: GCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR GCA 90 bp AGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTaGTGCTCCAGGAGGTGCGAACCTTGGGAATGGGGGAGGGGAGTG +
Preference number: 1 (lower is better)
Translates to: RWRLSRGQPRGLPRR*CSRRCEPWEWGRGV
Trigger: CACTCCCCTCCCCCATTCCCAAGGTTCGCACCTCCTGGAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR GCA 90 bp ACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTaGCCAGGCGCTGCTGCTCCAGGAGGTGCGAACCTTGGGAATGGG +
Preference number: 1 (lower is better)
Translates to: TATTGGGFPEASPED*PGAAAPGGANLGNG
Trigger: CCCATTCCCAAGGTTCGCACCTCCTGGAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR GCA 90 bp GATCAGTCGACCAGCCGCTGGCAGCTCTCCACGATCACCAGCTTCTaGTGGGGGCTGGTGCGCGCAAACACCATCTCGGGGTGGGTGCGC +
Preference number: 1 (lower is better)
Translates to: DQSTSRWQLSTITSF*WGLVRANTISGWVR
Trigger: GCGCACCCACCCCGAGATGGTGTTTGCGCGCACCAGCCCCCAGCAGAAGCTGGTGATCGTGGAGAGCTGCCAGCGGCTGGTCGACTGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR GCA 90 bp GTTGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCTaGCCCCACCTGCTGTGGCAGTTGCAGGGATGCTTGAAGGCAGTC +
Preference number: 1 (lower is better)
Translates to: VAQISWWLSRGSHEP*PHLLWQLQGCLKAV
Trigger: GACTGCCTTCAAGCATCCCTGCAACTGCCACAGCAGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR GCA 90 bp CCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGGGACTCTTGGTTaGTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCTG +
Preference number: 1 (lower is better)
Translates to: PWATEADTGGAGTLG*SDILVAVQRVPRAL
Trigger: CAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 90 bp GGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGGGACTCTTaGTTGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGC +
Preference number: 1 (lower is better)
Translates to: GAVGYRSRYWWGWDS*LLRYLGGCPEGPTS
Trigger: GCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 90 bp CACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCCAGCCTaGACTGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAG +
Preference number: 1 (lower is better)
Translates to: HKRVFNEGPSGSRPA*TGVLRTETPSRSGQ
Trigger: CTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTCCAGGCTGGACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 90 bp GTAGGAGTAGGCAGCCAGGGGCTCGTTGACCAATCTGTCACGCTTTaGGTTGCGTGGACGCAGGTGCATGATGTCACTCTCGGCCTTTTC +
Preference number: 1 (lower is better)
Translates to: VGVGSQGLVDQSVTL*VAWTQVHDVTLGLF
Trigger: GAAAAGGCCGAGAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCCTACTCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR CCA 90 bp CAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTaGGACTCTTGGTTGCTCAGATATCTTGGTGGCTGTCCAGAGGGT +
Preference number: 1 (lower is better)
Translates to: QVWGAVGYRSRYWWG*DSWLLRYLGGCPEG
Trigger: ACCCTCTGGACAGCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 90 bp TCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTaGGGCTGGGACTCTTGGTTGCTCAGATATCTTGGTGGCTGTCCA +
Preference number: 1 (lower is better)
Translates to: SLQVWGAVGYRSRYW*GWDSWLLRYLGGCP
Trigger: TGGACAGCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 90 bp AGGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTaGTGGGGCTGGGACTCTTGGTTGCTCAGATATCTTGGTGGCTGT +
Preference number: 1 (lower is better)
Translates to: RSLQVWGAVGYRSRY*WGWDSWLLRYLGGC
Trigger: ACAGCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 90 bp CTGAGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTaGTTTTATTACCATCGCCCAGGACACAAGCGTGTCTTTAACGAA +
Preference number: 1 (lower is better)
Translates to: LRTVPGTRYSTVSMS*FYYHRPGHKRVFNE
Trigger: TTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 90 bp TGTGGGAGATCACAAGCACTAATGAGAGACGCTGAGGACAGTGCCTaGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCA +
Preference number: 1 (lower is better)
Translates to: CGRSQALMRDAEDSA*HQIQHSQHELVLLP
Trigger: TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGATCTCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR GCA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGGGGTCCCACGAGCCCTaGCCCCACCTGCTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQGSHEP*PHLLWQ
Trigger: CTGCCACAGCAGGTGGGGGCAGGGCTCGTGGGACCC...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR GCA 90 bp ACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCCTGCCCAGGCGCTGCTaGTCCAGGAGGTGCGAACCT +
Preference number: 2 (lower is better)
Translates to: TIAQDTSVSLTKGPQAAVLPRRC*SRRCEP
Trigger: AGGTTCGCACCTCCTGGAGCAGCAGCGCCTGGGCAG...GACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR GCA 90 bp ACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCGGACTGCCCAGGCGCTaGTGCTCCAGGAGGTGCGAA +
Preference number: 2 (lower is better)
Translates to: TIAQDTSVSLTKGPQAAVGLPRR*CSRRCE
Trigger: TTCGCACCTCCTGGAGCAGCAGCGCCTGGGCAGTCC...GACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR GCA 90 bp AAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTGGCAGTTGCAGGGATaGTTGAAGGCAGTCGTCCCT +
Preference number: 2 (lower is better)
Translates to: KRSAVLPVRAPPPPQVAAWQLQG*LKAVVP
Trigger: AGGGACGACTGCCTTCAAGCATCCCTGCAACTGCCA...AGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGAGATACTGGTGGGGCTaGGACTCTTGGTTGCTCAGA +
Preference number: 2 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQRYWWG*DSWLLR
Trigger: TCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCT...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CAA 90 bp GAAGCAGATACTGGTGGGGCTGGGACTCTTGGTTGCTCAGATATCTaGGTGGCTGTCCAGAGGGTCCCACGAGCCCTGCCCCCACCTGCT +
Preference number: 2 (lower is better)
Translates to: EADTGGAGTLGCSDI*VAVQRVPRALPPPA
Trigger: AGCAGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp GGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTTGCCCCCACCTGCTGTaGCAGTTGCAGGGATGCTTG +
Preference number: 2 (lower is better)
Translates to: GPSKFGVPWATEADTGGACPHLL*QLQGCL
Trigger: CAAGCATCCCTGCAACTGCCACAGCAGGTGGGGGCA...AGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CAA 90 bp GCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGGGACTCTTGGTaGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCT +
Preference number: 2 (lower is better)
Translates to: AVGYRSRYWWGWDSW*LRYLGGCPEGPTSP
Trigger: AGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CAA 90 bp GGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGGGACTCTaGGTTGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAG +
Preference number: 2 (lower is better)
Translates to: GCRGLQKQILVGLGL*VAQISWWLSRGSHE
Trigger: CTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp CCGTCCAGCCTGGACTGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCATGCGAACCTTGGGAATaGGGGAGGGGAGTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PSSLDWSPKNRNTLQKRSCEPWE*GRGVGR
Trigger: CCTGCCCACTCCCCTCCCCCATTCCCAAGGTTCGCA...TGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTCCAGGCTGGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp GTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCACCGCCACCACAGGTaGCGGCTTTCCCGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: VLRTETPSRSGQLYSLSEHRHHR*RLSRGQ
Trigger: CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTG...CTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp GTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTACAGGACTGAGGTCCCTCCAAGTTTaGGGTGCCGTGGGCTACAGA +
Preference number: 2 (lower is better)
Translates to: VLGTGGAALDKQPPCTGLRSLQV*GAVGYR
Trigger: TCTGTAGCCCACGGCACCCCAAACTTGGAGGGACCT...CAGTCCTGTACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp CCGTCCAGCCTGGACTGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAAATGGGGGAGGGGAGTaGGCAGGTCCCTCCAAGTTT +
Preference number: 2 (lower is better)
Translates to: PSSLDWSPKNRNTLQKRSNGGGE*AGPSKF
Trigger: AAACTTGGAGGGACCTGCCCACTCCCCTCCCCCATT...TGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTCCAGGCTGGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR TCA 90 bp TTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCACTCCGCTGCCTTCCGAGATaGTGCCCACACTGGCTGCAA +
Preference number: 2 (lower is better)
Translates to: LTNLSRFGLRGRRCMMSLRCLPR*CPHWLQ
Trigger: TTGCAGCCAGTGTGGGCATCATCTCGGAAGGCAGCG...GAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR-3UTR GCA 90 bp AGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACAGCCCTGCCCCCACCTaGTGTGGCAGTTGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: RTVPGTRYSTVSMSWFYYSPAPT*CGSCRD
Trigger: ATCCCTGCAACTGCCACAGCAGGTGGGGGCAGGGCT...GTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp CCAGGCTGTGTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTAAGTTTGGGGTGCCGTaGGCTACAGAAGCAGATACT +
Preference number: 2 (lower is better)
Translates to: PGCVLGTGGAALDKQPPCKFGVP*ATEADT
Trigger: AGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTT...ACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTACACAGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp TTTATTACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAAGGAGGTGCGAACCTTaGGAATGGGGGAGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: FITIAQDTSVSLTKGPQARRCEP*EWGRGV
Trigger: CACTCCCCTCCCCCATTCCCAAGGTTCGCACCTCCT...TGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGTAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR GCA 90 bp AGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGACCTCCAAGTTTGGGGTaGCGTGGGCTACAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: SPKNRNTLQKRSAVLPVRPPSLG*RGLQKQ
Trigger: CTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGG...TCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp GTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGGCTCAGATATCTTGGTaGCTGTCCAGAGGGTCCCAC +
Preference number: 2 (lower is better)
Translates to: VLRTETPSRSGQLYSLSEAQISW*LSRGSH
Trigger: GTGGGACCCTCTGGACAGCCACCAAGATATCTGAGC...CTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp TCGTTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCATCCTTGCGATTAACCTaGTCTACGGGCACACGGAGG +
Preference number: 2 (lower is better)
Translates to: SLTNLSRFGLRGRRCMMSSLRLT*STGTRR
Trigger: CCTCCGTGTGCCCGTAGACCAGGTTAATCGCAAGGA...TGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR-3UTR CCA 90 bp TGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAAGCAGATACTGGTaGGGCTGGGACTCTTGGTTG +
Preference number: 2 (lower is better)
Translates to: WSPKNRNTLQKRSAVLPVRSRYW*GWDSWL
Trigger: CAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCT...GACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp GCCTTTTCATATGCCAGGGACACAGATGGGAAAATGTCAGTGCAGAGTTCGATGATCACCAGCTTCTGCTaGGGGCTGGTGCGCGCAAAC +
Preference number: 2 (lower is better)
Translates to: AFSYARDTDGKMSVQSSMITSFC*GLVRAN
Trigger: GTTTGCGCGCACCAGCCCCCAGCAGAAGCTGGTGAT...CATCGAACTCTGCACTGACATTTTCCCATCTGTGTCCCTGGCATATGAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR-3UTR CCA 90 bp CAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAAGCGTGTGTTGCTCAGATATCTTaGTGGCTGTCCAGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: QHSQHELVLLPSPRTQACVAQIS*WLSRGS
Trigger: GGACCCTCTGGACAGCCACCAAGATATCTGAGCAAC...ACACGCTTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CCA 90 bp GACTGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTTGGGGCTGGGACTCTTaGTTGCTCAGATATCTTGGT +
Preference number: 2 (lower is better)
Translates to: DWSPKNRNTLQKRSAVLPWGWDS*LLRYLG
Trigger: ACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCA...AGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR TCA 90 bp GCCTTTTCATATGCCAGGGACACAGATGGGAAAATGTCAGTGCAGAGTTCGATGTCAGCTGCATGCCATTaGTCACACAGGCACGGGCAT +
Preference number: 2 (lower is better)
Translates to: AFSYARDTDGKMSVQSSMSAACH*SHRHGH
Trigger: ATGCCCGTGCCTGTGTGATCAATGGCATGCAGCTGA...CATCGAACTCTGCACTGACATTTTCCCATCTGTGTCCCTGGCATATGAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR-3UTR CCA 90 bp TCTCGGCCTTTTCATATGCCAGGGACACAGATGGGAAAATGTCAGTGCAGAGTTCTCGACCAGTTCCGATaGGTCCATGTCCTTCAGCTG +
Preference number: 2 (lower is better)
Translates to: SRPFHMPGTQMGKCQCRVLDQFR*VHVLQL
Trigger: CAGCTGAAGGACATGGACCCATCGGAACTGGTCGAG...AACTCTGCACTGACATTTTCCCATCTGTGTCCCTGGCATATGAAAAGGCCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR CCA 72 bp TGCTGGGGGCTGGTGCGCGCAAACACCATCTCGGGGTaGGTGCGCAGGGCCTCGACCAGTTCCGATGGGTCC +
Preference number: 3 (lower is better)
Translates to: CWGLVRANTISG*VRRASTSSDGS
Trigger: GGACCCATCGGAACTGGTCGAGGCCCTGCGCACCCACCCCGAGATGGTGTTTGCGCGCACCAGCCCCCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR GCA 72 bp CTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTaGTGCTCCAGGAGGTGCGAACCTTGGGAATGGGGG +
Preference number: 3 (lower is better)
Translates to: LSRGQPRGLPRR*CSRRCEPWEWG
Trigger: CCCCCATTCCCAAGGTTCGCACCTCCTGGAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR GCA 72 bp ACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTaGCCAGGCGCTGCTGCTCCAGGAGGTGCGAACCTT +
Preference number: 3 (lower is better)
Translates to: TGGGFPEASPED*PGAAAPGGANL
Trigger: AAGGTTCGCACCTCCTGGAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR GCA 72 bp GGGGGCTGGTGCGCGCAAACACCATCTCGGGGTGGGTaGGCAGGGCCTCGACCAGTTCCGATGGGTCCATGT +
Preference number: 3 (lower is better)
Translates to: GGWCAQTPSRGG*AGPRPVPMGPC
Trigger: ACATGGACCCATCGGAACTGGTCGAGGCCCTGCGCACCCACCCCGAGATGGTGTTTGCGCGCACCAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR GCA 72 bp ACCAGCCGCTGGCAGCTCTCCACGATCACCAGCTTCTaGTGGGGGCTGGTGCGCGCAAACACCATCTCGGGG +
Preference number: 3 (lower is better)
Translates to: TSRWQLSTITSF*WGLVRANTISG
Trigger: CCCCGAGATGGTGTTTGCGCGCACCAGCCCCCAGCAGAAGCTGGTGATCGTGGAGAGCTGCCAGCGGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR-3UTR CAA 90 bp GCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTGGCTGGGACTCTTGGTaGCTCAGATATCTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: AVSCTPCQSPTATTGGGFGWDSW*LRYLGG
Trigger: GCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCC...AAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR GCA 72 bp ATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCTaGCCCCACCTGCTGTGGCAGTTGCAGGGATGCTTG +
Preference number: 3 (lower is better)
Translates to: ISWWLSRGSHEP*PHLLWQLQGCL
Trigger: CAAGCATCCCTGCAACTGCCACAGCAGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 72 bp GGCAGCCAGGGGCTCGTTGACCAATCTGTCACGCTTTaGGTTGCGTGGACGCAGGTGCATGATGTCACTCTC +
Preference number: 3 (lower is better)
Translates to: GSQGLVDQSVTL*VAWTQVHDVTL
Trigger: GAGAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR TCA 72 bp CAATCTGGAAGTAGGAGTAGGCAGCCAGGGGCTCGTTaGCCAATCTGTCACGCTTTGGGTTGCGTGGACGCA +
Preference number: 3 (lower is better)
Translates to: QSGSRSRQPGAR*PICHALGCVDA
Trigger: TGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCCTACTCCTACTTCCAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR CCA 72 bp GGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTaGGACTCTTGGTTGCTCAGATATCTTGGTGGCTGT +
Preference number: 3 (lower is better)
Translates to: GAVGYRSRYWWG*DSWLLRYLGGC
Trigger: ACAGCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 72 bp GTCTTTAACGAAGGGCCCTCAGGCAGCCGTCCAGCCTaGACTGGAGTCCTAAGAACAGAAACACCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: VFNEGPSGSRPA*TGVLRTETPSR
Trigger: TCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTCCAGGCTGGACGGCTGCCTGAGGGCCCTTCGTTAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 72 bp GGGCTCGTTGACCAATCTGTCACGCTTTGGGTTGCGTaGACGCAGGTGCATGATGTCACTCTCGGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: GLVDQSVTLWVA*TQVHDVTLGLF
Trigger: GAAAAGGCCGAGAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR-3UTR CAA 90 bp TTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCACTCCAGGCACGGGCATCCTaGCGATTAACCTGGTCTACG +
Preference number: 3 (lower is better)
Translates to: LTNLSRFGLRGRRCMMSLQARAS*RLTWST
Trigger: CGTAGACCAGGTTAATCGCAAGGATGCCCGTGCCTG...GAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR CCA 72 bp GTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTaGGGCTGGGACTCTTGGTTGCTCAGATATCTTGGT +
Preference number: 3 (lower is better)
Translates to: VWGAVGYRSRYW*GWDSWLLRYLG
Trigger: ACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CAA 90 bp CAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAACAGGTCCCTCCAAGTTaGGGGTGCCGTGGGCTACAG +
Preference number: 3 (lower is better)
Translates to: QIQHSQHELVLLPSPRTQQVPPS*GCRGLQ
Trigger: CTGTAGCCCACGGCACCCCAAACTTGGAGGGACCTG...TTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR TCA 72 bp GGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATaGGCTGGTTTTATTACCATCGCCCAGGACACAAGC +
Preference number: 3 (lower is better)
Translates to: GQCLAPDTAQSA*AGFITIAQDTS
Trigger: GCTTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR TCA 72 bp GGACTGTGGGAGATCACAAGCACTAATGAGAGACGCTaGGGACAGTGCCTGGCACCAGATACAGCACAGTCA +
Preference number: 3 (lower is better)
Translates to: GLWEITSTNERR*GQCLAPDTAQS
Trigger: TGACTGTGCTGTATCTGGTGCCAGGCACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGATCTCCCACAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR TCA 72 bp ATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATaGTGTCACTCTCGGCCTTTTCATATGCCAGGGACA +
Preference number: 3 (lower is better)
Translates to: ICHALGCVDAGA*CHSRPFHMPGT
Trigger: TGTCCCTGGCATATGAAAAGGCCGAGAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
3UTR CCA 72 bp CAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTaGTGGGGCTGGGACTCTTGGTTGCTCAGATATCTT +
Preference number: 3 (lower is better)
Translates to: QVWGAVGYRSRY*WGWDSWLLRYL
Trigger: AAGATATCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CAA 90 bp CAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAAGCGTGTGGTTGCTCAGATATCTaGGTGGCTGTCCAGAGGGTC +
Preference number: 3 (lower is better)
Translates to: QHSQHELVLLPSPRTQACGCSDI*VAVQRV
Trigger: GACCCTCTGGACAGCCACCAAGATATCTGAGCAACC...ACACGCTTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CCA 72 bp TCACAAGCACTAATGAGAGACGCTGAGGACAGTGCCTaGCACCAGATACAGCACAGTCAGCATGAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: SQALMRDAEDSA*HQIQHSQHELV
Trigger: AACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CAA 90 bp CAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAACACCTGCTGTGGCAGTaGCAGGGATGCTTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: QIQHSQHELVLLPSPRTQHLLWQ*QGCLKA
Trigger: TGCCTTCAAGCATCCCTGCAACTGCCACAGCAGGTG...TTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR-3UTR CAA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCAGTGGGGCTGGGACTCTaGGTTGCTCAGATATCTTGG +
Preference number: 3 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPVGLGL*VAQISW
Trigger: CCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCAC...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCGCGGTTGCACAGGGTaGGCACCCGGCACAGCGCCC +
Preference number: 4 (lower is better)
Translates to: APPPPQVAAFPRPAQRTARGCTG*APGTAP
Trigger: GGGCGCTGTGCCGGGTGCTCACCCTGTGCAACCGCG...GGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp ACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTCCGTGGTGGCCGCAGTaGGTTGGGCCCATCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TTGGGFPEASPEDCPGAAPWWPQ*VGPIPQ
Trigger: CTGCGGGATGGGCCCAACGCACTGCGGCCACCACGG...AGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp ACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTTGGTGGTCCTCCCACTaGGCCCGCAGCCCCACGCAC +
Preference number: 4 (lower is better)
Translates to: TTGGGFPEASPEDCPGAAWWSSH*ARSPTH
Trigger: GTGCGTGGGGCTGCGGGCGCAGTGGGAGGACCACCA...AGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAAGGCCCCCGGCCAGCTaGCTCGCGAACTTGACGTAC +
Preference number: 4 (lower is better)
Translates to: PTATTGGGFPEASPEDCPRPPAS*LANLTY
Trigger: GTACGTCAAGTTCGCGAGGCAGCTGGCCGGGGGCCT...TGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GGAGGGGAGTGGGCAGGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCACGGCGGCAACCCACATaGGGCACTGCAGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: GGEWAGPSKFGVPWATEARRQPT*GTAGPR
Trigger: CCGGGGGCCTGCAGTGCCTCATGTGGGTTGCCGCCG...TGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACCTGCCCACTCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGGCTGCCTCGCGAACTTaGCGTACTCTGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQAASRT*RTLGCP
Trigger: GGGGCACCCCAGAGTACGTCAAGTTCGCGAGGCAGC...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp GCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCGTCTCCAATCACGATaGGCTTGGGCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: APPPPQVAAFPRPAQRTARLQSR*AWAQAL
Trigger: CAGTGCCTGTGCCCAAGCGCATCGTGATTGGAGACG...GGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTGCTCCAGCGCCGTCTCCGATaGGTCTCCAATCACGATGCG +
Preference number: 4 (lower is better)
Translates to: QVAAFPRPAQRTAQALLLQRRLR*VSNHDA
Trigger: CGCATCGTGATTGGAGACGCATCGGAGACGGCGCTG...GAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTGCTCGATCACCCGGATGCCTaGGGTGCGACACTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: QVAAFPRPAQRTAQALLLDHPDA*GATLEH
Trigger: GTGCTCAAGTGTCGCACCGCAGGCATCCGGGTGATC...GAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTGCTCGCTTCTGCTGGGGGCTaGTGCGCGCAAACACCATCT +
Preference number: 4 (lower is better)
Translates to: QVAAFPRPAQRTAQALLLASAGG*CAQTPS
Trigger: AGATGGTGTTTGCGCGCACCAGCCCCCAGCAGAAGC...GAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCTCAGCTGCATGCCATTaGTCACACAGGCACGGGCAT +
Preference number: 4 (lower is better)
Translates to: APPPPQVAAFPRPAQRTASAACH*SHRHGH
Trigger: ATGCCCGTGCCTGTGTGATCAATGGCATGCAGCTGA...GGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp GCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTTCCAGAGGGCTCTCGTaGGTGCACTCGGGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: AVSCTPCQSPTATTGGGFSRGLS*VHSGER
Trigger: CCGCTCACCCGAGTGCACGCACGAGAGCCCTCTGGA...AAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGCCATCTCGGGGTGGGTaGGCAGGGCCTCGACCAGTT +
Preference number: 4 (lower is better)
Translates to: PSRSGQLYSLSEPHRHHRPSRGG*AGPRPV
Trigger: AACTGGTCGAGGCCCTGCGCACCCACCCCGAGATGG...CCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCACACGTCTCCGAGGACTaGTCAAACGTCTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PTATTGGGFPEASPEDCPHVSED*SNVCPD
Trigger: GTCAGGGCAGACGTTTGACCAGTCCTCGGAGACGTG...TGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAATCTGTCACGCTTTaGGTTGCGTGGACGCAGGTG +
Preference number: 4 (lower is better)
Translates to: APPPPQVAAFPRPAQRTAQSVTL*VAWTQV
Trigger: CACCTGCGTCCACGCAACCCAAAGCGTGACAGATTG...GGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTGCTCCAGCCGATGCAGACCTaGAACACGATGGCGATCACC +
Preference number: 4 (lower is better)
Translates to: QVAAFPRPAQRTAQALLLQPMQT*NTMAIT
Trigger: GGTGATCGCCATCGTGTTCCAGGTCTGCATCGGCTG...GAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GCGCGCAAACACCATCTCGGGGTGGGTGCGCAGGGCCTCGACCAGTTCCGATGGCAGTCGACCAGCCGCTaGCAGCTCTCCACGATCACC +
Preference number: 4 (lower is better)
Translates to: ARKHHLGVGAQGLDQFRWQSTSR*QLSTIT
Trigger: GGTGATCGTGGAGAGCTGCCAGCGGCTGGTCGACTG...CCATCGGAACTGGTCGAGGCCCTGCGCACCCACCCCGAGATGGTGTTTGCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR GCA 90 bp ACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGCTTCTCCTTCCTCTTaGCACCCCCGCCACCCGCCT +
Preference number: 4 (lower is better)
Translates to: TLQKRSAVLPVRAPPPPQASPSS*HPRHPP
Trigger: AGGCGGGTGGCGGGGGTGGCAAGAGGAAGGAGAAGC...CTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp GGAGGGGAGTGGGCAGGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGAGGGCTCTCGTGCGTaGACTCGGGTGAGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GGEWAGPSKFGVPWATEAEGSRA*TRVSGS
Trigger: AGACCCGCTCACCCGAGTGCACGCACGAGAGCCCTC...TGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACCTGCCCACTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCTACTCCGATGTCTaGCTTCTTCAGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PTATTGGGFPEASPEDCPGYSDV*LLQSWG
Trigger: TCCCCAGCTCTGAAGAAGGCAGACATCGGAGTAGCC...TGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp GCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTAGCCCTGCCCCCACCTaGTGTGGCAGTTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: AVSCTPCQSPTATTGGGFSPAPT*CGSCRD
Trigger: ATCCCTGCAACTGCCACAGCAGGTGGGGGCAGGGCT...AAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp ACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTCCTCCAAGTTTGGGGTaGCGTGGGCTACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TTGGGFPEASPEDCPGAAPPSLG*RGLQKQ
Trigger: CTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGG...AGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCACAATCACGATGCGCTTaGGCACAGGCACTGCATCCT +
Preference number: 4 (lower is better)
Translates to: PTATTGGGFPEASPEDCPQSRCA*AQALHP
Trigger: AGGATGCAGTGCCTGTGCCCAAGCGCATCGTGATTG...TGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp ACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGGATGGCAAAGGCGATaGGGCAGATGGCGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: TLQKRSAVLPVRAPPPPQGWQRR*GRWRRQ
Trigger: TTGCCGCCGCCATCTGCCTCATCGCCTTTGCCATCC...CTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGTGGCCAGGCCCGCGATaGTGTCCACAAAATGCTCGA +
Preference number: 4 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQWPGPR*CPQNAR
Trigger: TCGAGCATTTTGTGGACATCATCGCGGGCCTGGCCA...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GCCCTGCCCCCACCTGCTGTGGCAGTTGCAGGGATGCTTGAAGGCAGTCGTCCCCCACCACGATGGCCATaGAGAAGACCATGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ALPPPAVAVAGMLEGSRPPPRWP*RRPWPA
Trigger: TGCGGGCCATGGTCTTCTTCATGGCCATCGTGGTGG...GGGACGACTGCCTTCAAGCATCCCTGCAACTGCCACAGCAGGTGGGGGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCAAGCCAGCAAAGGACTaGATGGCACCAATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: APPPPQVAAFPRPAQRTAKPAKD*MAPIWK
Trigger: CTTCCAGATTGGTGCCATTCAGTCCTTTGCTGGCTT...GGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTGCTCAAGATCAGTCGACCCTaGTCCACGCCTGTCACAATG +
Preference number: 4 (lower is better)
Translates to: QVAAFPRPAQRTAQALLLKISRP*STPVTM
Trigger: CATTGTGACAGGCGTGGAGCAGGGTCGACTGATCTT...GAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CCAGGCTGTGTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTGGGTCCCACGAGCCCTaGCCCCACCTGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PGCVLGTGGAALDKQPPCGSHEP*PHLLWQ
Trigger: CTGCCACAGCAGGTGGGGGCAGGGCTCGTGGGACCC...ACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTACACAGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp TGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCTGCCCCCACCTCTGCCCAGGCGCTGCTaGTCCAGGAGGTGCGAACCT +
Preference number: 4 (lower is better)
Translates to: CSDILVAVQRVPRALPPPLPRRC*SRRCEP
Trigger: AGGTTCGCACCTCCTGGAGCAGCAGCGCCTGGGCAG...AGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGCCACTGACAGCTGGTaGTCGTTAATCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: PTATTGGGFPEASPEDCPATDSW*SLISIS
Trigger: GGAGATGGAGATTAACGACCACCAGCTGTCAGTGGC...TGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GGAGGGGAGTGGGCAGGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAACAGGCACTGCATCCTaGCCGGACTTGAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GGEWAGPSKFGVPWATEATGTAS*PDLKAA
Trigger: CGCCGCCTTCAAGTCCGGCCAGGATGCAGTGCCTGT...TGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACCTGCCCACTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGGACGGTGGCCCGGGGTaGGTCAATCATGGATACAAG +
Preference number: 4 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQDGGPG*VNHGYK
Trigger: CTTGTATCCATGATTGACCCACCCCGGGCCACCGTC...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTGCTCAGGACATCGGCGATCTaGCACACCTCAATGCTGATG +
Preference number: 4 (lower is better)
Translates to: QVAAFPRPAQRTAQALLLRTSAI*HTSMLM
Trigger: CATCAGCATTGAGGTGTGCCAGATCGCCGATGTCCT...GAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp ACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGTGCGAACCTTGGGAATaGGGGAGGGGAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLQKRSAVLPVRAPPPPQCEPWE*GRGVGR
Trigger: CCTGCCCACTCCCCTCCCCCATTCCCAAGGTTCGCA...CTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGTGCGTGCACTCGGGTaGGCGGGTCTGTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GPSKFGVPWATEADTGGAVRALG*AGLWLR
Trigger: TCTGAGCCACAGACCCGCTCACCCGAGTGCACGCAC...AGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGGGACAGGCAGACTGTaGCAGTGGCCAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GPSKFGVPWATEADTGGAGTGRL*QWPAAP
Trigger: AGGGGCTGCTGGCCACTGTCACAGTCTGCCTGTCCC...AGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp ACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGTCAGCTCCGAGAACTTaGGCAGCGCCGTCTCCGATG +
Preference number: 4 (lower is better)
Translates to: TLQKRSAVLPVRAPPPPQSAPRT*AAPSPM
Trigger: CATCGGAGACGGCGCTGCTCAAGTTCTCGGAGCTGA...CTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGATTTTTGGCAGCATCTaGGCCAGCGATGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQIFGSI*ASDAHG
Trigger: GCCATGGGCATCGCTGGCTCAGATGCTGCCAAAAAT...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp AAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTCAGCCAGGGGCTCGTTaGCCAATCTGTCACGCTTTG +
Preference number: 4 (lower is better)
Translates to: KRSAVLPVRAPPPPQVAAQPGAR*PICHAL
Trigger: CAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTG...AGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp CCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCACCAGGATCTTATTCCTaGAGAAGCCTTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PTATTGGGFPEASPEDCPPGSYS*RSLAGR
Trigger: CCTTCCAGCAAGGCTTCTTCAGGAATAAGATCCTGG...TGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp TGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCTGCCCCCACCTACGATCACCAGCTTCTaGTGGGGGCTGGTGCGCGCA +
Preference number: 4 (lower is better)
Translates to: CSDILVAVQRVPRALPPPTITSF*WGLVRA
Trigger: TGCGCGCACCAGCCCCCAGCAGAAGCTGGTGATCGT...AGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp AAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTGCGTGGACGCAGGTaGATGATGTCACTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KRSAVLPVRAPPPPQVAALRGRR*MMSLSA
Trigger: GGCCGAGAGTGACATCATGCACCTGCGTCCACGCAA...AGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTTCTCGGCCTTCCCCATaGTGCCCGGTGCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GPSKFGVPWATEADTGGASRPSP*CPVPVL
Trigger: GAGCACAGGCACCGGGCACCATGGGGAAGGCCGAGA...AGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp ACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCTCCACCTTGCAGCCCTaGGCCGCCAGGATGCGGATG +
Preference number: 4 (lower is better)
Translates to: TIAQDTSVSLTKGPQAAVSTLQP*AARMRM
Trigger: CATCCGCATCCTGGCGGCCCAGGGCTGCAAGGTGGA...GACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGGTCCCGGTAGCCCATaGCGTTGCCCAGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GPSKFGVPWATEADTGGAGPGSP*RCPASA
Trigger: AGCTGACGCTGGGCAACGCCATGGGCTACCGGGACC...AGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGGGGTCCTCCAGCGTATaGATGGACAGCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQGSSSV*MDSWNL
Trigger: CAAGTTCCAGCTGTCCATCCATACGCTGGAGGACCC...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp AGCCAGGGGCTCGTTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGAACACCATCTCGGGGTaGGTGCGCAGGGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: SQGLVDQSVTLWVAWTQVNTISG*VRRAST
Trigger: GGTCGAGGCCCTGCGCACCCACCCCGAGATGGTGTT...CACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp CCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGAGGTCCCTCCAAGTTTaGGGTGCCGTGGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: PSRSGQLYSLSEPHRHHRRSLQV*GAVGYR
Trigger: TCTGTAGCCCACGGCACCCCAAACTTGGAGGGACCT...CCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGATGCGATGCGCCCAATaGTGGTGCGGTCGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: VPPSLGCRGLQKQILVGLMRCAQ*WCGRPC
Trigger: ACACGGGCGACCGCACCATCATTGGGCGCATCGCAT...CAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp GTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGCCCCGACGCCAGCGATaGGATGCGCCCAATGATGGT +
Preference number: 4 (lower is better)
Translates to: VPPSLGCRGLQKQILVGLPRRQR*DAPNDG
Trigger: ACCATCATTGGGCGCATCGCATCGCTGGCGTCGGGG...CAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CTGGAAGTAGGAGTAGGCAGCCAGGGGCTCGTTGACCAATCTGTCACGCTTTGGAAGGCCTCGCGCCACTaGTCGTCCAGCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LEVGVGSQGLVDQSVTLWKASRH*SSSGSS
Trigger: GGAGCTGCCGCTGGACGAGCAGTGGCGCGAGGCCTT...CCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCCTACTCCTACTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR GCA 90 bp AGCCAGGGGCTCGTTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGACGATCACCAGCTTCTaGTGGGGGCTGGTGCGCGCA +
Preference number: 4 (lower is better)
Translates to: SQGLVDQSVTLWVAWTQVTITSF*WGLVRA
Trigger: TGCGCGCACCAGCCCCCAGCAGAAGCTGGTGATCGT...CACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp GTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGTGGGGTGCCCCGTGGTaGCCGCAGTGCGTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VLRTETPSRSGQLYSLSEWGAPW*PQCVGP
Trigger: GGGCCCAACGCACTGCGGCCACCACGGGGCACCCCA...CTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp ACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCGAACTTGACGTACTCTaGGGTGCCCCGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TIAQDTSVSLTKGPQAAVELDVL*GAPWWP
Trigger: CGGCCACCACGGGGCACCCCAGAGTACGTCAAGTTC...GACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GGAGGGGAGTGGGCAGGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCATCCCCCTCACTAGCCTaGATGGCAAAGGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: GGEWAGPSKFGVPWATEASPSLA*MAKAMR
Trigger: CCTCATCGCCTTTGCCATCCAGGCTAGTGAGGGGGA...TGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACCTGCCCACTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGGCTCAGATATCTTGGTaGCTGTCCAGAGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PSRSGQLYSLSEPHRHHRAQISW*LSRGSH
Trigger: GTGGGACCCTCTGGACAGCCACCAAGATATCTGAGC...CCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp ACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCTGCTGGTACAGGCGCTaGCCGAATGTCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: TIAQDTSVSLTKGPQAAVCWYRR*PNVHSW
Trigger: CCAGGAGTGGACATTCGGGCAGCGCCTGTACCAGCA...GACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp GGAGGGGAGTGGGCAGGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAACAGGAAGCAGCCGATaGAGACCTGGAACACGATGG +
Preference number: 4 (lower is better)
Translates to: GGEWAGPSKFGVPWATEATGSSR*RPGTRW
Trigger: CCATCGTGTTCCAGGTCTGCATCGGCTGCTTCCTGT...TGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACCTGCCCACTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCTGACTGGTCTTCCGTaGTGTCAGCTGTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: AVSCTPCQSPTATTGGGFLTGLP*CQLCGC
Trigger: ACATCCACACAGCTGACACCACGGAAGACCAGTCAG...AAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp ACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGCTCGACCAGTTCCGATaGGTCCATGTCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TLQKRSAVLPVRAPPPPQLDQFR*VHVLQL
Trigger: CAGCTGAAGGACATGGACCCATCGGAACTGGTCGAG...CTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp AGCCAGGGGCTCGTTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGATCACCAGCTTCTGCTaGGGGCTGGTGCGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: SQGLVDQSVTLWVAWTQVITSFC*GLVRAN
Trigger: GTTTGCGCGCACCAGCCCCCAGCAGAAGCTGGTGAT...CACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp GGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGTCCCACCAGCTCCCTaGGCAACAGCGAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: GPSKFGVPWATEADTGGAVPPAP*ATANSK
Trigger: CTTGGAGTTCGCTGTTGCCCAGGGAGCTGGTGGGAC...AGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGTGCCCCCACCTGCTGTaGCAGTTGCAGGGATGCTTG +
Preference number: 4 (lower is better)
Translates to: VPPSLGCRGLQKQILVGLCPHLL*QLQGCL
Trigger: CAAGCATCCCTGCAACTGCCACAGCAGGTGGGGGCA...CAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGAAGTTTGGGGTGCCGTaGGCTACAGAAGCAGATACT +
Preference number: 4 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQKFGVP*ATEADT
Trigger: AGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTT...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
3UTR CAA 72 bp GCCAGGGGCTCGTTGACCAATCTGTCACGCTTTGGGTaGCGTGGACGCAGGTGCATGATGTCACTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: ARGSLTNLSRFG*RGRRCMMSLSA
Trigger: GGCCGAGAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR TCA 90 bp GGCAGCCAGGGGCTCGTTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGTCAGCTGCATGCCATTaGTCACACAGGCACGGGCAT +
Preference number: 4 (lower is better)
Translates to: GSQGLVDQSVTLWVAWTQSAACH*SHRHGH
Trigger: ATGCCCGTGCCTGTGTGATCAATGGCATGCAGCTGA...CTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR GCA 90 bp CTGGAAGTAGGAGTAGGCAGCCAGGGGCTCGTTGACCAATCTGTCACGCTTTGGTCTGCTGGGGGCTGGTaGGCGCAAACACCATCTCGG +
Preference number: 4 (lower is better)
Translates to: LEVGVGSQGLVDQSVTLWSAGGW*AQTPSR
Trigger: CCGAGATGGTGTTTGCGCGCACCAGCCCCCAGCAGA...CCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCCTACTCCTACTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp ACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGTCCGCCACTGACAGCTaGTGGTCGTTAATCTCCATC +
Preference number: 4 (lower is better)
Translates to: TLQKRSAVLPVRAPPPPQSATDS*WSLISI
Trigger: GATGGAGATTAACGACCACCAGCTGTCAGTGGCGGA...CTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp AGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGACTCTGGGGTGCCCCGTaGTGGCCGCAGTGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: SPKNRNTLQKRSAVLPVRLWGAP*WPQCVG
Trigger: CCCAACGCACTGCGGCCACCACGGGGCACCCCAGAG...TCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGCTGAAGAAGCCTTGCTaGAAGGCAGAGAGACGGCGC +
Preference number: 4 (lower is better)
Translates to: VPPSLGCRGLQKQILVGLLKKPC*KAERRR
Trigger: GCGCCGTCTCTCTGCCTTCCAGCAAGGCTTCTTCAG...CAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp TGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCCATCCTGGCCGGACTTaGAGGCGGCGCGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: WSPKNRNTLQKRSAVLPVHPGRT*RRRGCT
Trigger: TGTGCAACCGCGCCGCCTTCAAGTCCGGCCAGGATG...GACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTACAGGACTGCGCTGCCTTCCGAGATaGTGCCCACACTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VLGTGGAALDKQPPCTGLRCLPR*CPHWLQ
Trigger: TTGCAGCCAGTGTGGGCATCATCTCGGAAGGCAGCG...CAGTCCTGTACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp TGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGCGGCCTTCCCCATGGTaGCCGGTGCCTGTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: WHQIQHSQHELVLLPSPRRPSPW*PVPVLP
Trigger: TGGGAGCACAGGCACCGGGCACCATGGGGAAGGCCG...CCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp AGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCCTGGGCCGCCAGGATaGGGATGTCGGCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: RTVPGTRYSTVSMSWFYYPGPPG*GCRRAL
Trigger: GAGTGCCCGCCGACATCCGCATCCTGGCGGCCCAGG...GTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp TTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCACTCCCATCTCGGGGTGGGTaGGCAGGGCCTCGACCAGTT +
Preference number: 4 (lower is better)
Translates to: LTNLSRFGLRGRRCMMSLPSRGG*AGPRPV
Trigger: AACTGGTCGAGGCCCTGCGCACCCACCCCGAGATGG...GAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp GCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTGTATGGATGGACAGCTaGAACTTGTTGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AVSCTPCQSPTATTGGGFVWMDS*NLLVEL
Trigger: CAACTCCACCAACAAGTTCCAGCTGTCCATCCATAC...AAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGCACCGCCACCACAGGTaGCGGCTTTCCCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: WHQIQHSQHELVLLPSPRHRHHR*RLSRGQ
Trigger: CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTG...CCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp CCAGGCTGTGTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTGTGGACGCAGGTGCATaGTGTCACTCTCGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: PGCVLGTGGAALDKQPPCVDAGA*CHSRPF
Trigger: AAAAGGCCGAGAGTGACATCATGCACCTGCGTCCAC...ACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTACACAGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp TGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCTGCCCCCACCTCCGCCTTCTTCTTCTTaGTCATCTTGGCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: CSDILVAVQRVPRALPPPPPSSS*SSWQPC
Trigger: ACATGGCTGCCAAGATGAGCAAGAAGAAGAAGGCGG...AGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCAACCCACATGAGGCACTaGAGGCCCCCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPTHMRH*RPPASC
Trigger: GCAGCTGGCCGGGGGCCTGCAGTGCCTCATGTGGGT...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp TGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCTTCACCACCAGGCCCTaGACGGTGCCCTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: WSPKNRNTLQKRSAVLPVFTTRP*TVPSRH
Trigger: GTGCCTTGAGGGCACCGTGCAGGGCCTGGTGGTGAA...GACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp GTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTACAGGACTGCTTGGGCACAGGCACTaGATCCTGGCCGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: VLGTGGAALDKQPPCTGLLGHRH*ILAGLE
Trigger: TTCAAGTCCGGCCAGGATGCAGTGCCTGTGCCCAAG...CAGTCCTGTACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp AGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACAAGGCCTCGCGCCACTaGTCGTCCAGCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTVPGTRYSTVSMSWFYYKASRH*SSSGSS
Trigger: GGAGCTGCCGCTGGACGAGCAGTGGCGCGAGGCCTT...GTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGCCTCAAGGCACATGGTaGAGAAGAAGGCGATGTTGC +
Preference number: 4 (lower is better)
Translates to: VPPSLGCRGLQKQILVGLPQGTW*RRRRCC
Trigger: GCAACATCGCCTTCTTCTCCACCATGTGCCTTGAGG...CAGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CAAACACCATCTCGGGGTGGGTGCGCAGGGCCTCGACCAGTTCCGATGGGTCCAGTAGGGTGTCAGCTCTaGGATGTTCTTGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: QTPSRGGCAGPRPVPMGPVGCQL*DVLGQC
Trigger: ACATTGACCAAGAACATCCCAGAGCTGACACCCTAC...TGGACCCATCGGAACTGGTCGAGGCCCTGCGCACCCACCCCGAGATGGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp ACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCTACAGAAGCAGATACTaGTGGGGCTGGGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: TIAQDTSVSLTKGPQAAVYRSRY*WGWDSW
Trigger: CCAAGAGTCCCAGCCCCACCAGTATCTGCTTCTGTA...GACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp AGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACGGACTGCCCAGGCGCTaGTGCTCCAGGAGGTGCGAA +
Preference number: 4 (lower is better)
Translates to: RTVPGTRYSTVSMSWFYYGLPRR*CSRRCE
Trigger: TTCGCACCTCCTGGAGCAGCAGCGCCTGGGCAGTCC...GTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CCAGGCTGTGTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTGGCCCTTGGTGGCACTaGTCTGGTATTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PGCVLGTGGAALDKQPPCGPWWH*SGISVP
Trigger: TGGAACAGAAATACCAGACCAGTGCCACCAAGGGCC...ACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTACACAGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCTACTGGCCAGGCGCTTaGCTGTCAGGGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WSPKNRNTLQKRSAVLPVYWPGA*LSGTGR
Trigger: TCTGCCTGTCCCTGACAGCCAAGCGCCTGGCCAGTA...GACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CCGTCCAGCCTGGACTGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAAACGTCTGCCCTGACTaGTCTTCCGTGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PSSLDWSPKNRNTLQKRSNVCPD*SSVVSA
Trigger: AGCTGACACCACGGAAGACCAGTCAGGGCAGACGTT...TGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTCCAGGCTGGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CCAGGCTGTGTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTCCTCCAGCGTATGGATaGACAGCTGGAACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PGCVLGTGGAALDKQPPCPPAYG*TAGTCW
Trigger: CCAACAAGTTCCAGCTGTCCATCCATACGCTGGAGG...ACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTACACAGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CATGTACAGGACTGTGGGAGATCACAAGCACTAATGAGAGACGCTGAGGACAGTAACACCATCTCGGGGTaGGTGCGCAGGGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: HVQDCGRSQALMRDAEDSNTISG*VRRAST
Trigger: GGTCGAGGCCCTGCGCACCCACCCCGAGATGGTGTT...ACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGATCTCCCACAGTCCTGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp AATCTGGAAGTAGGAGTAGGCAGCCAGGGGCTCGTTGACCAATCTGTCACGCTTGCTTCTGCTGGGGGCTaGTGCGCGCAAACACCATCT +
Preference number: 4 (lower is better)
Translates to: NLEVGVGSQGLVDQSVTLASAGG*CAQTPS
Trigger: AGATGGTGTTTGCGCGCACCAGCCCCCAGCAGAAGC...AAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCCTACTCCTACTTCCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp TGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGGAGGTGCGAACCTTaGGAATGGGGGAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: WSPKNRNTLQKRSAVLPVRRCEP*EWGRGV
Trigger: CACTCCCCTCCCCCATTCCCAAGGTTCGCACCTCCT...GACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGTGTCTCCATCGCGGATaGCAGTGGCTTGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLRTETPSRSGQLYSLSECLHRG*QWLAVA
Trigger: TGCCACAGCAAGCCACTGTCATCCGCGATGGAGACA...CTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp TCGTTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCACAGCCAGGGGCTCGTTaGCCAATCTGTCACGCTTTG +
Preference number: 4 (lower is better)
Translates to: SLTNLSRFGLRGRRCMMSQPGAR*PICHAL
Trigger: CAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTG...TGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR TCA 90 bp CAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAAGGCGCGTCTTGCGGATaGGGACATCGGCGATCTGGC +
Preference number: 4 (lower is better)
Translates to: QIQHSQHELVLLPSPRTQGASCG*GHRRSG
Trigger: GCCAGATCGCCGATGTCCTCATCCGCAAGACGCGCC...TTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp AGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACGGTAGCCCATGGCGTTaGCCAGCGTCAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RTVPGTRYSTVSMSWFYYGSPWR*PASAPR
Trigger: TCTCGGAGCTGACGCTGGGCAACGCCATGGGCTACC...GTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp TCGTTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCATTGCGTGGACGCAGGTaGATGATGTCACTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SLTNLSRFGLRGRRCMMSLRGRR*MMSLSA
Trigger: GGCCGAGAGTGACATCATGCACCTGCGTCCACGCAA...TGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR GCA 90 bp CCGTCCAGCCTGGACTGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCATTCCTGAAGAAGCCTTaGTGGAAGGCAGAGAGACGG +
Preference number: 4 (lower is better)
Translates to: PSSLDWSPKNRNTLQKRSFLKKP*WKAERR
Trigger: CCGTCTCTCTGCCTTCCAGCAAGGCTTCTTCAGGAA...TGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTCCAGGCTGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp ACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCTCAGCTGTGTGGATGTaGTTGTCAAACCACAGATGG +
Preference number: 4 (lower is better)
Translates to: TIAQDTSVSLTKGPQAAVSAVWM*LSNHRW
Trigger: CCATCTGTGGTTTGACAACCACATCCACACAGCTGA...GACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp AGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAATCACCAGCTTCTGCTaGGGGCTGGTGCGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: SPKNRNTLQKRSAVLPVRITSFC*GLVRAN
Trigger: GTTTGCGCGCACCAGCCCCCAGCAGAAGCTGGTGAT...TCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGTGCAGATCTTGTAGGTaGTGGTCCTCCCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: VLRTETPSRSGQLYSLSECRSCR*WSSHCA
Trigger: GGCGCAGTGGGAGGACCACCACCTACAAGATCTGCA...CTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CCAGGCTGTGTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTTGGGGCTGGGACTCTTaGTTGCTCAGATATCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGCVLGTGGAALDKQPPCWGWDS*LLRYLG
Trigger: ACCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCA...ACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTACACAGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAATGGGGGAGGGGAGTaGGCAGGTCCCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: WSPKNRNTLQKRSAVLPVNGGGE*AGPSKF
Trigger: AAACTTGGAGGGACCTGCCCACTCCCCTCCCCCATT...GACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCGGCAGCCGTCCAGCCTaGACTGGAGTCCTAAGAACA +
Preference number: 4 (lower is better)
Translates to: WSPKNRNTLQKRSAVLPVGSRPA*TGVLRT
Trigger: TGTTCTTAGGACTCCAGTCCAGGCTGGACGGCTGCC...GACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAAAGGAGTTGTCCACCTTaGAGCCCTGGGCCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QIQHSQHELVLLPSPRTQRSCPP*SPGPPG
Trigger: TCCTGGCGGCCCAGGGCTGCAAGGTGGACAACTCCT...TTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp TGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCTGCCCCCACCTATGATGTCCACAAAATaGTCGATCTCGATAGCGATG +
Preference number: 4 (lower is better)
Translates to: CSDILVAVQRVPRALPPPMMSTK*SISIAM
Trigger: CATCGCTATCGAGATCGAGCATTTTGTGGACATCAT...AGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAATCTGCTGGGGGCTGGTaGGCGCAAACACCATCTCGG +
Preference number: 4 (lower is better)
Translates to: QIQHSQHELVLLPSPRTQSAGGW*AQTPSR
Trigger: CCGAGATGGTGTTTGCGCGCACCAGCCCCCAGCAGA...TTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp GTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGTGGCAGTTGCAGGGATaGTTGAAGGCAGTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: VLRTETPSRSGQLYSLSEWQLQG*LKAVVP
Trigger: AGGGACGACTGCCTTCAAGCATCCCTGCAACTGCCA...CTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GACTGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTTCCTTGCGATTAACCTaGTCTACGGGCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: DWSPKNRNTLQKRSAVLPSLRLT*STGTRR
Trigger: CCTCCGTGTGCCCGTAGACCAGGTTAATCGCAAGGA...AGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TCGTTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCACTCGACCAGTTCCGATaGGTCCATGTCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLTNLSRFGLRGRRCMMSLDQFR*VHVLQL
Trigger: CAGCTGAAGGACATGGACCCATCGGAACTGGTCGAG...TGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp CAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAAATCGCACCCAGCCGCTaGCAGCTCTCCACGATCACC +
Preference number: 4 (lower is better)
Translates to: QIQHSQHELVLLPSPRTQIAPSR*QLSTIT
Trigger: GGTGATCGTGGAGAGCTGCCAGCGGCTGGGTGCGAT...TTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCACTCACGCTTTGGGTTGCGTaGACGCAGGTGCATGATGTC +
Preference number: 4 (lower is better)
Translates to: LTNLSRFGLRGRRCMMSLTLWVA*TQVHDV
Trigger: GACATCATGCACCTGCGTCCACGCAACCCAAAGCGT...GAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp TCGTTGACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCACAATCTGTCACGCTTTaGGTTGCGTGGACGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLTNLSRFGLRGRRCMMSQSVTL*VAWTQV
Trigger: CACCTGCGTCCACGCAACCCAAAGCGTGACAGATTG...TGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp CCAGGCTGTGTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTCAGCAAAGGACTGAATaGCACCAATCTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PGCVLGTGGAALDKQPPCQQRTE*HQSGSR
Trigger: CCTACTTCCAGATTGGTGCCATTCAGTCCTTTGCTG...ACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTACACAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGGGGACCAGCCACCACTaGAACCGAATGGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: WHQIQHSQHELVLLPSPRGTSHH*NRMGMK
Trigger: CTTCATGCCCATTCGGTTCCAGTGGTGGCTGGTCCC...CCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GCCTTTTCATATGCCAGGGACACAGATGGGAAAATGTCAGTGCAGAGTTCGATGCGCTGCCTTCCGAGATaGTGCCCACACTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: AFSYARDTDGKMSVQSSMRCLPR*CPHWLQ
Trigger: TTGCAGCCAGTGTGGGCATCATCTCGGAAGGCAGCG...CATCGAACTCTGCACTGACATTTTCCCATCTGTGTCCCTGGCATATGAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR TCA 90 bp TTTATTACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCACATCATAGACGAAGATaGGGATGCCGTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FITIAQDTSVSLTKGPQAHHRRR*GCRRAG
Trigger: CCCTGCCCTACGGCATCCTCATCTTCGTCTATGATG...TGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CTGGAAGTAGGAGTAGGCAGCCAGGGGCTCGTTGACCAATCTGTCACGCTTTGGTCCATGTCCTTCAGCTaGATGCCATTGATCACACAG +
Preference number: 4 (lower is better)
Translates to: LEVGVGSQGLVDQSVTLWSMSFS*MPLITQ
Trigger: CTGTGTGATCAATGGCATGCAGCTGAAGGACATGGA...CCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCCTACTCCTACTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp TGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGTCGCAGAGAGGCCCTTaGTGGCACTGGTCTGGTATT +
Preference number: 4 (lower is better)
Translates to: WHQIQHSQHELVLLPSPRSQRGP*WHWSGI
Trigger: AATACCAGACCAGTGCCACCAAGGGCCTCTCTGCGA...CCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CATGTACAGGACTGTGGGAGATCACAAGCACTAATGAGAGACGCTGAGGACAGTTCCAGCGGCAGCTCCTaGCCCTTGATAAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: HVQDCGRSQALMRDAEDSSSGSS*PLIRME
Trigger: CTCCATCCTTATCAAGGGCCAGGAGCTGCCGCTGGA...ACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGATCTCCCACAGTCCTGTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCGCAGAGGCCGCTAGATaGAAAGTTCATGGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: WSPKNRNTLQKRSAVLPVAEAAR*KVHGLY
Trigger: GTAGAGGCCATGAACTTTCCATCTAGCGGCCTCTGC...GACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGAGAAGCAGATACTGGTaGGGCTGGGACTCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: VLRTETPSRSGQLYSLSERSRYW*GWDSWL
Trigger: CAACCAAGAGTCCCAGCCCCACCAGTATCTGCTTCT...CTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATTCCAGCTCCGCCACTaGCAGCTGGTGGTCGTTAAT +
Preference number: 4 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPFQLRH*QLVVVN
Trigger: ATTAACGACCACCAGCTGTCAGTGGCGGAGCTGGAA...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp AGCTGCATGCCATTGATCACACAGGCACGGGCATCCTTGCGATTAACCTGGTCTCTCGGCCTTTTCATATaGCAGGGACACAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: SCMPLITQARASLRLTWSLGLFI*QGHRWE
Trigger: TTCCCATCTGTGTCCCTGGCATATGAAAAGGCCGAG...AGACCAGGTTAATCGCAAGGATGCCCGTGCCTGTGTGATCAATGGCATGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CCA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCTTCTTGCTCATCTTaGCAGCCATGTCCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPSSCSS*QPCPRQ
Trigger: CTGGCGGGGACATGGCTGCCAAGATGAGCAAGAAGA...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp AGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGACAGAGAGGCCCTTGGTaGCACTGGTCTGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: SPKNRNTLQKRSAVLPVRQRGPW*HWSGIS
Trigger: AGAAATACCAGACCAGTGCCACCAAGGGCCTCTCTG...TCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCAAGCAGATCACCGAAGTaGAGCCCAATGTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPSRSPK*SPMSPP
Trigger: CGGTGGAGACATTGGGCTCCACTTCGGTGATCTGCT...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp AGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACTATCTCGCAGACTTTTaGGAAGCGGTCCCGGTAGCC +
Preference number: 4 (lower is better)
Translates to: RTVPGTRYSTVSMSWFYYYLADF*EAVPVA
Trigger: GGCTACCGGGACCGCTTCCCAAAAGTCTGCGAGATA...GTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CATGTACAGGACTGTGGGAGATCACAAGCACTAATGAGAGACGCTGAGGACAGTACGCTTTGGGTTGCGTaGACGCAGGTGCATGATGTC +
Preference number: 4 (lower is better)
Translates to: HVQDCGRSQALMRDAEDSTLWVA*TQVHDV
Trigger: GACATCATGCACCTGCGTCCACGCAACCCAAAGCGT...ACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGATCTCCCACAGTCCTGTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp AGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGTTGCTCAGATATCTTaGTGGCTGTCCAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPKNRNTLQKRSAVLPVRVAQIS*WLSRGS
Trigger: GGACCCTCTGGACAGCCACCAAGATATCTGAGCAAC...TCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp TTTATTACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCACCGTCCAGCCTGGACTaGAGTCCTAAGAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: FITIAQDTSVSLTKGPQAPSSLD*SPKNRN
Trigger: GTTTCTGTTCTTAGGACTCCAGTCCAGGCTGGACGG...TGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CCGTCCAGCCTGGACTGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAACAGTCAGCATGAGCTaGTTTTATTACCATCGCCCA +
Preference number: 4 (lower is better)
Translates to: PSSLDWSPKNRNTLQKRSTVSMS*FYYHRP
Trigger: TGGGCGATGGTAATAAAACCAGCTCATGCTGACTGT...TGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTCCAGGCTGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp TCTCGGCCTTTTCATATGCCAGGGACACAGATGGGAAAATGTCAGTGCAGAGTTGTGGACGCAGGTGCATaGTGTCACTCTCGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SRPFHMPGTQMGKCQCRVVDAGA*CHSRPF
Trigger: AAAAGGCCGAGAGTGACATCATGCACCTGCGTCCAC...AACTCTGCACTGACATTTTCCCATCTGTGTCCCTGGCATATGAAAAGGCCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR GCA 90 bp AGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGACTCGGCCTTTTCATATaGCAGGGACACAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: SPKNRNTLQKRSAVLPVRLGLFI*QGHRWE
Trigger: TTCCCATCTGTGTCCCTGGCATATGAAAAGGCCGAG...TCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp AGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACTGCCCTCAAGGCACATaGTGGAGAAGAAGGCGATGT +
Preference number: 4 (lower is better)
Translates to: RTVPGTRYSTVSMSWFYYCPQGT*WRRRRC
Trigger: ACATCGCCTTCTTCTCCACCATGTGCCTTGAGGGCA...GTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GACTGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTAGACCTGGAACACGATaGCGATCACCAGGATCTTAT +
Preference number: 4 (lower is better)
Translates to: DWSPKNRNTLQKRSAVLPRPGTR*RSPGSY
Trigger: ATAAGATCCTGGTGATCGCCATCGTGTTCCAGGTCT...AGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCAAGATACTGGTGGGGCTaGGACTCTTGGTTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPRYWWG*DSWLLR
Trigger: TCTGAGCAACCAAGAGTCCCAGCCCCACCAGTATCT...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR TCA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCACCAGTTGGTCAGCGTTaGTCTGGAATTTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPPVGQR*SGICLH
Trigger: ATGGAGACAAATTCCAGATCAACGCTGACCAACTGG...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp AGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACAGCAATGAGAGCGATTaGCAGGTACAGATTGTCGTC +
Preference number: 4 (lower is better)
Translates to: RTVPGTRYSTVSMSWFYYSNESD*QVQIVV
Trigger: GACGACAATCTGTACCTGGCAATCGCTCTCATTGCT...GTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp CAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAACGGATGACAGTGGCTTaGTGTGGCACAAGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: QIQHSQHELVLLPSPRTQRMTVA*CGTRFL
Trigger: TAAGAACCTTGTGCCACAGCAAGCCACTGTCATCCG...TTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR GCA 90 bp AGGACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACTCCATGTCCTTCAGCTaGATGCCATTGATCACACAG +
Preference number: 4 (lower is better)
Translates to: RTVPGTRYSTVSMSWFYYSMSFS*MPLITQ
Trigger: CTGTGTGATCAATGGCATGCAGCTGAAGGACATGGA...GTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CATGTACAGGACTGTGGGAGATCACAAGCACTAATGAGAGACGCTGAGGACAGTGTAGGGTGTCAGCTCTaGGATGTTCTTGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: HVQDCGRSQALMRDAEDSVGCQL*DVLGQC
Trigger: ACATTGACCAAGAACATCCCAGAGCTGACACCCTAC...ACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGATCTCCCACAGTCCTGTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CCA 90 bp CAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACACAAGACAGTGGCTTGCTGTaGCACAAGGTTCTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: QIQHSQHELVLLPSPRTQDSGLL*HKVLKA
Trigger: AGCTTTAAGAACCTTGTGCCACAGCAAGCCACTGTC...TTGTGTCCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCTCGCAGAGAGGCCCTaGGTGGCACTGGTCTGGTAT +
Preference number: 5 (lower is better)
Translates to: APPPPQVAAFPRPAQRTALAERP*VALVWY
Trigger: ATACCAGACCAGTGCCACCAAGGGCCTCTCTGCGAG...GGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS GCA 90 bp GCAAAGGCGATGAGGCAGATGGCGGCGGCAACCCACATGAGGCACTaGAGGCCCCCGGCCAGCTGCCTCGCGAACTTGACGTACTCTGGG +
Preference number: 5 (lower is better)
Translates to: AKAMRQMAAATHMRH*RPPASCLANLTYSG
Trigger: CCCAGAGTACGTCAAGTTCGCGAGGCAGCTGGCCGGGGGCCTGCAGTGCCTCATGTGGGTTGCCGCCGCCATCTGCCTCATCGCCTTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000590916.1
CDS GCA 90 bp ACAATCGCACCCAGCCGCTGGCAGCTCTCCACGATCACCAGCTTCTaGTGGGGGCTGGTGCGCGCAAACACCATCTCGGGGTGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: TIAPSRWQLSTITSF*WGLVRANTISGWVR
Trigger: GCGCACCCACCCCGAGATGGTGTTTGCGCGCACCAGCCCCCAGCAGAAGCTGGTGATCGTGGAGAGCTGCCAGCGGCTGGGTGCGATTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS-3UTR CAA 90 bp ACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCGGTGGCCGCAGTGCGTaGGGCCCATCCCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TIAQDTSVSLTKGPQAAVGGRSA*GPSRSS
Trigger: GCTGCTGCGGGATGGGCCCAACGCACTGCGGCCACC...GACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGCCTGTCAGCGAGGAGTaGTCCACCTTGCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQPVSEE*STLQPW
Trigger: CCAGGGCTGCAAGGTGGACAACTCCTCGCTGACAGG...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp CAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTGCTCGTATCTCGCAGACTTTaGGGAAGCGGTCCCGGTAGC +
Preference number: 5 (lower is better)
Translates to: QVAAFPRPAQRTAQALLLVSRRL*GSGPGS
Trigger: GCTACCGGGACCGCTTCCCAAAAGTCTGCGAGATAC...GAGCAGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp CCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGAGCTGCCTCGCGAACTaGACGTACTCTGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: PSRSGQLYSLSEPHRHHRSCLAN*TYSGVP
Trigger: GGGCACCCCAGAGTACGTCAAGTTCGCGAGGCAGCT...CCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp TACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCCCGAGGCCAGGGCAGCTCCTGGCCCTaGATAAGGATGGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: YSLSEPHRHHRWRLSRGQGSSWP*IRMELQ
Trigger: CTGCAGCTCCATCCTTATCAAGGGCCAGGAGCTGCC...CTGGCCTCGGGAAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS TCA 90 bp GGTCCCGGTAGCCCATGGCGTTGCCCAGCGTCAGCTCCGAGAACTTaGGCAGCGCCGTCTCCGATGCGTCTCCAATCACGATGCGCTTGG +
Preference number: 5 (lower is better)
Translates to: GPGSPWRCPASAPRT*AAPSPMRLQSRCAW
Trigger: CCAAGCGCATCGTGATTGGAGACGCATCGGAGACGGCGCTGCTCAAGTTCTCGGAGCTGACGCTGGGCAACGCCATGGGCTACCGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp CAAACACCATCTCGGGGTGGGTGCGCAGGGCCTCGACCAGTTCCGATGGGTCCACTGTCACGCTTTGGGTaGCGTGGACGCAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: QTPSRGGCAGPRPVPMGPLSRFG*RGRRCM
Trigger: CATGCACCTGCGTCCACGCAACCCAAAGCGTGACAG...TGGACCCATCGGAACTGGTCGAGGCCCTGCGCACCCACCCCGAGATGGTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS TCA 90 bp GCCCTTGGTGGCACTGGTCTGGTATTTCTGTTCCAGCTCCGCCACTaGCAGCTGGTGGTCGTTCTGTGTGGTGGGGTGGGGCAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: ALGGTGLVFLFQLRH*QLVVVLCGGVGQGA
Trigger: AGCACCCTGCCCCACCCCACCACACAGAACGACCACCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCAGACCAGTGCCACCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590916.1
CDS GCA 90 bp GTTGCCCAGCGTCAGCTCCGAGAACTTGAGCAGCGCCGTCTCCGATaGGTCTCCAATCACGATGCGCTTGGGCACAGGCACTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: VAQRQLRELEQRRLR*VSNHDALGHRHCIL
Trigger: CAGGATGCAGTGCCTGTGCCCAAGCGCATCGTGATTGGAGACGCATCGGAGACGGCGCTGCTCAAGTTCTCGGAGCTGACGCTGGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CCA 90 bp GCCAGGTACAGATTGTCGTCGGTGGTGAGGTCCCCCTCACTAGCCTaGATGGCAAAGGCGATGAGGCAGATGGCGGCGGCAACCCACATG +
Preference number: 5 (lower is better)
Translates to: ARYRLSSVVRSPSLA*MAKAMRQMAAATHM
Trigger: CATGTGGGTTGCCGCCGCCATCTGCCTCATCGCCTTTGCCATCCAGGCTAGTGAGGGGGACCTCACCACCGACGACAATCTGTACCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000590916.1
CDS CCA 90 bp GCACTGGTCTGGTATTTCTGTTCCAGCTCCGCCACTGACAGCTGGTaGTCGTTCTGTGTGGTGGGGTGGGGCAGGGTGCTTGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: ALVWYFCSSSATDSW*SFCVVGWGRVLALG
Trigger: GCCCAGAGCAAGCACCCTGCCCCACCCCACCACACAGAACGACCACCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCAGACCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590916.1
CDS-3UTR CAA 90 bp AAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTCAGCTGCATGCCATaGATCACACAGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: KRSAVLPVRAPPPPQVAAFSCMP*ITQARA
Trigger: TGCCCGTGCCTGTGTGATCAATGGCATGCAGCTGAA...AGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp CCAGGCTGTGTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTGAGAGACGGCGCGTCTaGCGGATGAGGACATCGGCG +
Preference number: 5 (lower is better)
Translates to: PGCVLGTGGAALDKQPPCERRRV*RMRTSA
Trigger: CGCCGATGTCCTCATCCGCAAGACGCGCCGTCTCTC...ACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTACACAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTGTGGGGCTGGGACTCTaGGTTGCTCAGATATCTTGG +
Preference number: 5 (lower is better)
Translates to: AVSCTPCQSPTATTGGGFVGLGL*VAQISW
Trigger: CCAAGATATCTGAGCAACCAAGAGTCCCAGCCCCAC...AAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp ACCATCGCCCAGGACACAAGCGTGTCTTTAACGAAGGGCCCTCAGGCAGCCGTCCAGGTCCCTCCAAGTTaGGGGTGCCGTGGGCTACAG +
Preference number: 5 (lower is better)
Translates to: TIAQDTSVSLTKGPQAAVQVPPS*GCRGLQ
Trigger: CTGTAGCCCACGGCACCCCAAACTTGGAGGGACCTG...GACGGCTGCCTGAGGGCCCTTCGTTAAAGACACGCTTGTGTCCTGGGCGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp ACCACAGGTGGCGGCTTTCCCGAGGCCAGCCCAGAGGACTGCCCAGGCGCTGCTCCCAAGGCAGGTTTATaGAGGACCTACTATGTGCCA +
Preference number: 5 (lower is better)
Translates to: TTGGGFPEASPEDCPGAAPKAGL*RTYYVP
Trigger: TGGCACATAGTAGGTCCTCAATAAACCTGCCTTGGG...AGCAGCGCCTGGGCAGTCCTCTGGGCTGGCCTCGGGAAAGCCGCCACCTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CCA 90 bp TGGTGGCTGTCCAGAGGGTCCCACGAGCCCTGCCCCCACCTGCTGTaGCAGTTGCAGGGATGCTTGAAGGCAGTCGTCCCTCTAATAGTA +
Preference number: 5 (lower is better)
Translates to: WWLSRGSHEPCPHLL*QLQGCLKAVVPLIV
Trigger: TACTATTAGAGGGACGACTGCCTTCAAGCATCCCTGCAACTGCCACAGCAGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS CCA 90 bp GTGGCACTGGTCTGGTATTTCTGTTCCAGCTCCGCCACTGACAGCTaGTGGTCGTTCTGTGTGGTGGGGTGGGGCAGGGTGCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: VALVWYFCSSSATDS*WSFCVVGWGRVLAL
Trigger: CAGAGCAAGCACCCTGCCCCACCCCACCACACAGAACGACCACCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCAGACCAGTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590916.1
CDS-3UTR CAA 90 bp GGAGGGGAGTGGGCAGGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGCGGATGACAGTGGCTaGCTGTGGCACAAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: GGEWAGPSKFGVPWATEAADDSG*LWHKVL
Trigger: AAGAACCTTGTGCCACAGCAAGCCACTGTCATCCGC...TGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACCTGCCCACTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGTCAGCTCCGAGAACTaGAGCAGCGCCGTCTCCGAT +
Preference number: 5 (lower is better)
Translates to: GPSKFGVPWATEADTGGAVSSEN*SSAVSD
Trigger: ATCGGAGACGGCGCTGCTCAAGTTCTCGGAGCTGAC...AGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTATGTCAGCTGCATTTTaGGCAGCATCTGAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: AVSCTPCQSPTATTGGGFMSAAF*AASEPA
Trigger: CGCTGGCTCAGATGCTGCCAAAAATGCAGCTGACAT...AAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp TGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCTGCCCCCACCTCACCTGCTGTGGCAGTaGCAGGGATGCTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: CSDILVAVQRVPRALPPPHLLWQ*QGCLKA
Trigger: TGCCTTCAAGCATCCCTGCAACTGCCACAGCAGGTG...AGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp ACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGGTTGCTCAGATATCTaGGTGGCTGTCCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: TLQKRSAVLPVRAPPPPQGCSDI*VAVQRV
Trigger: GACCCTCTGGACAGCCACCAAGATATCTGAGCAACC...CTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp TGCTCAGATATCTTGGTGGCTGTCCAGAGGGTCCCACGAGCCCTGCCCCCACCTATTGCCAGGTACAGATaGTCGTCGGTGGTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: CSDILVAVQRVPRALPPPIARYR*SSVVRS
Trigger: GGACCTCACCACCGACGACAATCTGTACCTGGCAAT...AGGTGGGGGCAGGGCTCGTGGGACCCTCTGGACAGCCACCAAGATATCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GCGGTCAGCTGTACTCCCTGTCAGAGCCCCACCGCCACCACAGGTGGCGGCTTTGCGTTGATCTGGAATTaGTCTCCATCGCGGATGACA +
Preference number: 5 (lower is better)
Translates to: AVSCTPCQSPTATTGGGFALIWN*SPSRMT
Trigger: TGTCATCCGCGATGGAGACAAATTCCAGATCAACGC...AAAGCCGCCACCTGTGGTGGCGGTGGGGCTCTGACAGGGAGTACAGCTGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGTTGAAGGCGGCGCGGTaGCACAGGGTGAGCACCCGG +
Preference number: 5 (lower is better)
Translates to: VLRTETPSRSGQLYSLSELKAAR*HRVSTR
Trigger: CCGGGTGCTCACCCTGTGCAACCGCGCCGCCTTCAA...CTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp CGCAGGGCCTCGACCAGTTCCGATGGGTCCATGTCCTTCAGCTGCATGCCATTGCAGGCACGGGCATCCTaGCGATTAACCTGGTCTACG +
Preference number: 5 (lower is better)
Translates to: RRASTSSDGSMSFSCMPLQARAS*RLTWST
Trigger: CGTAGACCAGGTTAATCGCAAGGATGCCCGTGCCTG...CAATGGCATGCAGCTGAAGGACATGGACCCATCGGAACTGGTCGAGGCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CAA 90 bp GGTCCCTCCAAGTTTGGGGTGCCGTGGGCTACAGAAGCAGATACTGGTGGGGCTGCAGCCAGGGGCTCGTaGACCAATCTGTCACGCTTT +
Preference number: 5 (lower is better)
Translates to: GPSKFGVPWATEADTGGAAARGS*TNLSRF
Trigger: AAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGC...AGCCCCACCAGTATCTGCTTCTGTAGCCCACGGCACCCCAAACTTGGAGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp CATGTACAGGACTGTGGGAGATCACAAGCACTAATGAGAGACGCTGAGGACAGTAGCTTCTCCTTCCTCTaGCCACCCCCGCCACCCGCC +
Preference number: 5 (lower is better)
Translates to: HVQDCGRSQALMRDAEDSSFSFL*PPPPPA
Trigger: GGCGGGTGGCGGGGGTGGCAAGAGGAAGGAGAAGCT...ACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGATCTCCCACAGTCCTGTACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS GCA 90 bp GTGGCACCGAAGAGAATGGCCAGGCCCGCGATGATGTCCACAAAATaGTCGATCTCGATAGCGATGGGTGTCTTCTCGTTTTCCACCCCC +
Preference number: 5 (lower is better)
Translates to: VAPKRMARPAMMSTK*SISIAMGVFSFSTP
Trigger: GGGGGTGGAAAACGAGAAGACACCCATCGCTATCGAGATCGAGCATTTTGTGGACATCATCGCGGGCCTGGCCATTCTCTTCGGTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GTACTAGGCACTGGAGGTGCAGCCCTGGATAAACAGCCCCCATGTACAGGACTGGGCTGGGACTCTTGGTaGCTCAGATATCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: VLGTGGAALDKQPPCTGLGWDSW*LRYLGG
Trigger: GCCACCAAGATATCTGAGCAACCAAGAGTCCCAGCC...CAGTCCTGTACATGGGGGCTGTTTATCCAGGGCTGCACCTCCAGTGCCTAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGAGGTCGCCCACCACCAGTaGGTCAGCGTTGATCTGGAA +
Preference number: 5 (lower is better)
Translates to: VLRTETPSRSGQLYSLSEVAHHQ*VSVDLE
Trigger: TTCCAGATCAACGCTGACCAACTGGTGGTGGGCGAC...CTCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp ACCAATCTGTCACGCTTTGGGTTGCGTGGACGCAGGTGCATGATGTCACTCTCGTTCAGCTGCATGCCATaGATCACACAGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: TNLSRFGLRGRRCMMSLSFSCMP*ITQARA
Trigger: TGCCCGTGCCTGTGTGATCAATGGCATGCAGCTGAA...CGAGAGTGACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CAA 90 bp TGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGCTGTCACGCTTTGGGTaGCGTGGACGCAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: WHQIQHSQHELVLLPSPRLSRFG*RGRRCM
Trigger: CATGCACCTGCGTCCACGCAACCCAAAGCGTGACAG...CCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp AATCTGGAAGTAGGAGTAGGCAGCCAGGGGCTCGTTGACCAATCTGTCACGCTTCCAATCTGTCACGCTTaGGGTTGCGTGGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: NLEVGVGSQGLVDQSVTLPICHA*GCVDAG
Trigger: ACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGG...AAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCCTACTCCTACTTCCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CAA 90 bp TCCTTCAGCTGCATGCCATTGATCACACAGGCACGGGCATCCTTGCGATTAACCGCAGCCAGGGGCTCGTaGACCAATCTGTCACGCTTT +
Preference number: 5 (lower is better)
Translates to: SFSCMPLITQARASLRLTAARGS*TNLSRF
Trigger: AAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGC...GGTTAATCGCAAGGATGCCCGTGCCTGTGTGATCAATGGCATGCAGCTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592767.2
CDS-3UTR CAA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCACCAATCACGATGCGCTaGGGCACAGGCACTGCATCC +
Preference number: 5 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPPITMR*GTGTAS
Trigger: GGATGCAGTGCCTGTGCCCAAGCGCATCGTGATTGG...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp AGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCAGACAGGCACGGGCATCCTaGCGATTAACCTGGTCTACG +
Preference number: 5 (lower is better)
Translates to: SPKNRNTLQKRSAVLPVRQARAS*RLTWST
Trigger: CGTAGACCAGGTTAATCGCAAGGATGCCCGTGCCTG...TCTGACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp TGGAGTCCTAAGAACAGAAACACCCTCCAGAAGCGGTCAGCTGTACTCCCTGTCCAGTTGCAGGGATGCTaGAAGGCAGTCGTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: WSPKNRNTLQKRSAVLPVQLQGC*KAVVPL
Trigger: TAGAGGGACGACTGCCTTCAAGCATCCCTGCAACTG...GACAGGGAGTACAGCTGACCGCTTCTGGAGGGTGTTTCTGTTCTTAGGACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS TCA 90 bp GCCCTTGGTGGCACTGGTCTGGTATTTCTGTTCCAGCTCCGCCACTaGCAGCTGGTGGTCGTTAATCTCCATCTCCTTCTTCATGTTCTC +
Preference number: 5 (lower is better)
Translates to: ALGGTGLVFLFQLRH*QLVVVNLHLLLHVL
Trigger: GAGAACATGAAGAAGGAGATGGAGATTAACGACCACCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCAGACCAGTGCCACCAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp CATGTACAGGACTGTGGGAGATCACAAGCACTAATGAGAGACGCTGAGGACAGTCCAATCTGTCACGCTTaGGGTTGCGTGGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: HVQDCGRSQALMRDAEDSPICHA*GCVDAG
Trigger: ACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGG...ACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGATCTCCCACAGTCCTGTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CCA 90 bp GCACTGGTCTGGTATTTCTGTTCCAGCTCCGCCACTGACAGCTGGTaGTCGTTAATCTCCATCTCCTTCTTCATGTTCTCCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ALVWYFCSSSATDSW*SLISISFFMFSSFS
Trigger: GGAGAAGCTGGAGAACATGAAGAAGGAGATGGAGATTAACGACCACCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCAGACCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CCA 90 bp GTGGCACTGGTCTGGTATTTCTGTTCCAGCTCCGCCACTGACAGCTaGTGGTCGTTAATCTCCATCTCCTTCTTCATGTTCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: VALVWYFCSSSATDS*WSLISISFFMFSSF
Trigger: GAAGCTGGAGAACATGAAGAAGGAGATGGAGATTAACGACCACCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCAGACCAGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATTCTTCTTGCTCATCTaGGCAGCCATGTCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPFFLLI*AAMSPP
Trigger: TGGCGGGGACATGGCTGCCAAGATGAGCAAGAAGAA...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp CATGTACAGGACTGTGGGAGATCACAAGCACTAATGAGAGACGCTGAGGACAGTATTCCTGAAGAAGCCTaGCTGGAAGGCAGAGAGACG +
Preference number: 5 (lower is better)
Translates to: HVQDCGRSQALMRDAEDSIPEEA*LEGRET
Trigger: CGTCTCTCTGCCTTCCAGCAAGGCTTCTTCAGGAAT...ACTGTCCTCAGCGTCTCTCATTAGTGCTTGTGATCTCCCACAGTCCTGTACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp GACAGTGCCTGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCACGAATGGGCATGAAGTaGAAGATGTTGGGCATGCCG +
Preference number: 5 (lower is better)
Translates to: DSAWHQIQHSQHELVLLPRMGMK*KMLGMP
Trigger: CGGCATGCCCAACATCTTCAACTTCATGCCCATTCG...TGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCAGGCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS-3UTR CAA 90 bp TGGCACCAGATACAGCACAGTCAGCATGAGCTGGTTTTATTACCATCGCCCAGGACCAGTTGGTCAGCGTaGATCTGGAATTTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: WHQIQHSQHELVLLPSPRTSWSA*IWNLSP
Trigger: TGGAGACAAATTCCAGATCAACGCTGACCAACTGGT...CCTGGGCGATGGTAATAAAACCAGCTCATGCTGACTGTGCTGTATCTGGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CCA 72 bp GCCCCCGGCCAGCTGCCTCGCGAACTTGACGTACTCTaGGGTGCCCCGTGGTGGCCGCAGTGCGTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: APGQLPRELDVL*GAPWWPQCVGP
Trigger: GGGCCCAACGCACTGCGGCCACCACGGGGCACCCCAGAGTACGTCAAGTTCGCGAGGCAGCTGGCCGGGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000590916.1
CDS CAA 72 bp GGCACTGCATCCTGGCCGGACTTGAAGGCGGCGCGGTaGCACAGGGTGAGCACCCGGCACAGCGCCCGCCAC +
Preference number: 6 (lower is better)
Translates to: GTASWPDLKAAR*HRVSTRHSARH
Trigger: GTGGCGGGCGCTGTGCCGGGTGCTCACCCTGTGCAACCGCGCCGCCTTCAAGTCCGGCCAGGATGCAGTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CAA 90 bp TTGGGCACAGGCACTGCATCCTGGCCGGACTTGAAGGCGGCGCGGTaGCACAGGGTGAGCACCCGGCACAGCGCCCGCCACGTCTCCGAG +
Preference number: 6 (lower is better)
Translates to: LGTGTASWPDLKAAR*HRVSTRHSARHVSE
Trigger: CTCGGAGACGTGGCGGGCGCTGTGCCGGGTGCTCACCCTGTGCAACCGCGCCGCCTTCAAGTCCGGCCAGGATGCAGTGCCTGTGCCCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CAA 90 bp CCAATCACGATGCGCTTGGGCACAGGCACTGCATCCTGGCCGGACTaGAAGGCGGCGCGGTTGCACAGGGTGAGCACCCGGCACAGCGCC +
Preference number: 6 (lower is better)
Translates to: PITMRLGTGTASWPD*KAARLHRVSTRHSA
Trigger: GGCGCTGTGCCGGGTGCTCACCCTGTGCAACCGCGCCGCCTTCAAGTCCGGCCAGGATGCAGTGCCTGTGCCCAAGCGCATCGTGATTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS GCA 72 bp ATGAGGCAGATGGCGGCGGCAACCCACATGAGGCACTaGAGGCCCCCGGCCAGCTGCCTCGCGAACTTGACG +
Preference number: 6 (lower is better)
Translates to: MRQMAAATHMRH*RPPASCLANLT
Trigger: CGTCAAGTTCGCGAGGCAGCTGGCCGGGGGCCTGCAGTGCCTCATGTGGGTTGCCGCCGCCATCTGCCTCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000590916.1
CDS GCA 72 bp CCCAGCCGCTGGCAGCTCTCCACGATCACCAGCTTCTaGTGGGGGCTGGTGCGCGCAAACACCATCTCGGGG +
Preference number: 6 (lower is better)
Translates to: PSRWQLSTITSF*WGLVRANTISG
Trigger: CCCCGAGATGGTGTTTGCGCGCACCAGCCCCCAGCAGAAGCTGGTGATCGTGGAGAGCTGCCAGCGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS CAA 72 bp TCGCGCCACTGCTCGTCCAGCGGCAGCTCCTGGCCCTaGATAAGGATGGAGCTGCAGCGCTCCAGCACGCGC +
Preference number: 6 (lower is better)
Translates to: SRHCSSSGSSWP*IRMELQRSSTR
Trigger: GCGCGTGCTGGAGCGCTGCAGCTCCATCCTTATCAAGGGCCAGGAGCTGCCGCTGGACGAGCAGTGGCGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS GCA 72 bp CTGTCCTGCAGATCTTGTAGGTGGTGGTCCTCCCACTaGGCCCGCAGCCCCACGCACAGCAGTGGGAACCAG +
Preference number: 6 (lower is better)
Translates to: LSCRSCRWWSSH*ARSPTHSSGNQ
Trigger: CTGGTTCCCACTGCTGTGCGTGGGGCTGCGGGCGCAGTGGGAGGACCACCACCTACAAGATCTGCAGGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS TCA 72 bp AGCCCATGGCGTTGCCCAGCGTCAGCTCCGAGAACTTaGGCAGCGCCGTCTCCGATGCGTCTCCAATCACGA +
Preference number: 6 (lower is better)
Translates to: SPWRCPASAPRT*AAPSPMRLQSR
Trigger: TCGTGATTGGAGACGCATCGGAGACGGCGCTGCTCAAGTTCTCGGAGCTGACGCTGGGCAACGCCATGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS GCA 72 bp CGTCAGCTCCGAGAACTTGAGCAGCGCCGTCTCCGATaGGTCTCCAATCACGATGCGCTTGGGCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: RQLRELEQRRLR*VSNHDALGHRH
Trigger: GTGCCTGTGCCCAAGCGCATCGTGATTGGAGACGCATCGGAGACGGCGCTGCTCAAGTTCTCGGAGCTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CCA 72 bp GCCAGGCTCGCAGAGAGGCCCTTGGTGGCACTGGTCTaGTATTTCTGTTCCAGCTCCGCCACTGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: ARLAERPLVALV*YFCSSSATDSW
Trigger: CCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCAGACCAGTGCCACCAAGGGCCTCTCTGCGAGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000590916.1
CDS CCA 72 bp AGATTGTCGTCGGTGGTGAGGTCCCCCTCACTAGCCTaGATGGCAAAGGCGATGAGGCAGATGGCGGCGGCA +
Preference number: 6 (lower is better)
Translates to: RLSSVVRSPSLA*MAKAMRQMAAA
Trigger: TGCCGCCGCCATCTGCCTCATCGCCTTTGCCATCCAGGCTAGTGAGGGGGACCTCACCACCGACGACAATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000590916.1
CDS CAA 72 bp AAGAAGCCTTGCTGGAAGGCAGAGAGACGGCGCGTCTaGCGGATGAGGACATCGGCGATCTGGCACACCTCA +
Preference number: 6 (lower is better)
Translates to: KKPCWKAERRRV*RMRTSAIWHTS
Trigger: TGAGGTGTGCCAGATCGCCGATGTCCTCATCCGCAAGACGCGCCGTCTCTCTGCCTTCCAGCAAGGCTTCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS GCA 72 bp GAGCCCTGCCCCCACCTGCTGTGGCAGTTGCAGGGATaGTTGAAGGCAGTCGTCCCTCTAATAGTAGAGTTC +
Preference number: 6 (lower is better)
Translates to: EPCPHLLWQLQG*LKAVVPLIVEF
Trigger: GAACTCTACTATTAGAGGGACGACTGCCTTCAAGCATCCCTGCAACTGCCACAGCAGGTGGGGGCAGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS CAA 72 bp CCCTGCCCCCACCTGCTGTGGCAGTTGCAGGGATGCTaGAAGGCAGTCGTCCCTCTAATAGTAGAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: PCPHLLWQLQGC*KAVVPLIVEFL
Trigger: CAGGAACTCTACTATTAGAGGGACGACTGCCTTCAAGCATCCCTGCAACTGCCACAGCAGGTGGGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS CCA 72 bp GCGATCACCAGGATCTTATTCCTGAAGAAGCCTTGCTaGAAGGCAGAGAGACGGCGCGTCTTGCGGATGAGG +
Preference number: 6 (lower is better)
Translates to: AITRILFLKKPC*KAERRRVLRMR
Trigger: CCTCATCCGCAAGACGCGCCGTCTCTCTGCCTTCCAGCAAGGCTTCTTCAGGAATAAGATCCTGGTGATCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS CAA 90 bp TTATTCCTGAAGAAGCCTTGCTGGAAGGCAGAGAGACGGCGCGTCTaGCGGATGAGGACATCGGCGATCTGGCACACCTCAATGCTGATG +
Preference number: 6 (lower is better)
Translates to: LFLKKPCWKAERRRV*RMRTSAIWHTSMLM
Trigger: CATCAGCATTGAGGTGTGCCAGATCGCCGATGTCCTCATCCGCAAGACGCGCCGTCTCTCTGCCTTCCAGCAAGGCTTCTTCAGGAATAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262623.4
ENST00000592131.5
CDS CCA 72 bp CATGGATACAAGTCCCGCAAAGCAGAGGCCGCTAGATaGAAAGTTCATGGCCTCTACGTCGAAGGCATAGCC +
Preference number: 6 (lower is better)
Translates to: HGYKSRKAEAAR*KVHGLYVEGIA
Trigger: GGCTATGCCTTCGACGTAGAGGCCATGAACTTTCCATCTAGCGGCCTCTGCTTTGCGGGACTTGTATCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS GCA 72 bp AAGAGAATGGCCAGGCCCGCGATGATGTCCACAAAATaGTCGATCTCGATAGCGATGGGTGTCTTCTCGTTT +
Preference number: 6 (lower is better)
Translates to: KRMARPAMMSTK*SISIAMGVFSF
Trigger: AAACGAGAAGACACCCATCGCTATCGAGATCGAGCATTTTGTGGACATCATCGCGGGCCTGGCCATTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CCA 72 bp TGGTATTTCTGTTCCAGCTCCGCCACTGACAGCTGGTaGTCGTTAATCTCCATCTCCTTCTTCATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: WYFCSSSATDSW*SLISISFFMFS
Trigger: GGAGAACATGAAGAAGGAGATGGAGATTAACGACCACCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4
CDS CCA 72 bp GTCTGGTATTTCTGTTCCAGCTCCGCCACTGACAGCTaGTGGTCGTTAATCTCCATCTCCTTCTTCATGTTC +
Preference number: 6 (lower is better)
Translates to: VWYFCSSSATDS*WSLISISFFMF
Trigger: GAACATGAAGAAGGAGATGGAGATTAACGACCACCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262623.4