RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2C2 (Homo sapiens)

Ensembl gene IDs: ENSG00000064270

Ensembl transcript IDs: ENST00000262429.9, ENST00000416219.6, ENST00000420010.6, ENST00000563340.1, ENST00000564099.1, ENST00000565546.5, ENST00000565631.5, ENST00000565927.1, ENST00000566874.1, ENST00000567222.1, ENST00000567629.1, ENST00000567892.5, ENST00000568160.1, ENST00000569207.5, ENST00000624933.1

Found 490 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACGCTGGATGGATGTaGGCCTGGGTCCCTGGAGCCCACGAGGTTCCTGCAGCTTTCCTA +
Preference number: 1 (lower is better)
Translates to: PLPVCPTASGNAGWM*AWVPGAHEVPAAFL
Trigger: TAGGAAAGCTGCAGGAACCTCGTGGGCTCCAGGGACCCAGGCCCACATCCATCCAGCGTTCCCGCTGGCTGTGGGACAGACAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR GCA 90 bp GAGTGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTaGCACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGT +
Preference number: 1 (lower is better)
Translates to: ECDHPTHCLSGAPCI*HEWPASLQAVAQIR
Trigger: ACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR CCA 90 bp GGAGTTTTCCTTCTCTTAGGCAGTTACATTCTGGAGGAACCAGCTTaGTCAGCTCTTCCAGAGATTTCTCCGACCTGTACTCCTGGCAGG +
Preference number: 1 (lower is better)
Translates to: GVFLLLGSYILEEPA*SALPEISPTCTPGR
Trigger: CCTGCCAGGAGTACAGGTCGGAGAAATCTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAGAATGTAACTGCCTAAGAGAAGGAAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569207.5
3UTR GCA 90 bp GAGAGAGATACGACATCACCAGGAACCAGTTCTCGAGCAAGCAGGTaGTGGAGTTTTCCTTCTCTTAGGCAGTTACATTCTGGAGGAACC +
Preference number: 1 (lower is better)
Translates to: ERDTTSPGTSSRASR*WSFPSLRQLHSGGT
Trigger: GGTTCCTCCAGAATGTAACTGCCTAAGAGAAGGAAAACTCCAGCACCTGCTTGCTCGAGAACTGGTTCCTGGTGATGTCGTATCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569207.5
3UTR CCA 90 bp AGAGATACGACATCACCAGGAACCAGTTCTCGAGCAAGCAGGTGCTaGAGTTTTCCTTCTCTTAGGCAGTTACATTCTGGAGGAACCAGC +
Preference number: 1 (lower is better)
Translates to: RDTTSPGTSSRASRC*SFPSLRQLHSGGTS
Trigger: GCTGGTTCCTCCAGAATGTAACTGCCTAAGAGAAGGAAAACTCCAGCACCTGCTTGCTCGAGAACTGGTTCCTGGTGATGTCGTATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569207.5
3UTR-3UTR CCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGAGCGGGAACGCTGGATaGATGTGGGCCTGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: THCLSGAPCICHEWPASLSGNAG*MWAWVP
Trigger: AGGGACCCAGGCCCACATCCATCCAGCGTTCCCGCT...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR CCA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTAACGCTGGATGGATGTaGGCCTGGGTCCCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: ILPTASQEPLVSATSGLPNAGWM*AWVPGA
Trigger: GGCTCCAGGGACCCAGGCCCACATCCATCCAGCGTT...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR CCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTAGCGGGAACGCTGGATaGATGTGGGCCTGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: PLRSPLYLPRVACLTASCSGNAG*MWAWVP
Trigger: AGGGACCCAGGCCCACATCCATCCAGCGTTCCCGCT...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR TCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTCCTAAAAGTCTCCCCTaGCGAGGAGACACGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PLRSPLYLPRVACLTASCPKSLP*RGDTAG
Trigger: CCCTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGG...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR TCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTAAAAGTCTCCCCTaGCGAGGAGACACGGCAGGG +
Preference number: 2 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWPKSLP*RGDTAG
Trigger: CCCTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGG...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR TCA 90 bp ACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAGAAAAACTGATCCGGTaGTGGAAGGCTGCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: TVWCFCTGPSLSVPQPAGEKLIR*WKAAAS
Trigger: GGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTC...TCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR GCA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCCGGTGATGGAAGGCTaGGGCCTCCTAAAAGTCTCC +
Preference number: 2 (lower is better)
Translates to: ILPTASQEPLVSATSGLPPVMEG*GLLKVS
Trigger: GGAGACTTTTAGGAGGCCGCAGCCTTCCATCACCGG...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR CCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTGTGGGCCTGGGTCCCTaGAGCCCACGAGGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGVGLGP*SPRGSC
Trigger: GCAGGAACCTCGTGGGCTCCAGGGACCCAGGCCCAC...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR TCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGACAACCAGATCGAGATaGTTAGGGAAGGTGCCGCGG +
Preference number: 2 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQTTRSR*LGKVPR
Trigger: CCGCGGCACCTTCCCTAATCATCTCGATCTGGTTGT...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR GCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGCCGGTGATGGAAGGCTaGGGCCTCCTAAAAGTCTCC +
Preference number: 2 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRPVMEG*GLLKVS
Trigger: GGAGACTTTTAGGAGGCCGCAGCCTTCCATCACCGG...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR GCA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCAGCCCACGAGGTTCCTaGAGCTTTCCTAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: HPTHCLSGAPCICHEWPASPRGS*SFPKRK
Trigger: TTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCT...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR TCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACCTAAGAGGAAAAACTaGTCCGGTGATGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: QCGVSVQAPPCLSHSQREPKRKN*SGDGRL
Trigger: CAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGG...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR GCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTAGCCCACGAGGTTCCTaGAGCTTTCCTAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: PLRSPLYLPRVACLTASCSPRGS*SFPKRK
Trigger: TTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCT...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR TCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGCCTAAGAGGAAAAACTaGTCCGGTGATGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRPKRKN*SGDGRL
Trigger: CAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGG...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR TCA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGACAACCAGATCGAGATaGTTAGGGAAGGTGCCGCGG +
Preference number: 2 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMTTRSR*LGKVPR
Trigger: CCGCGGCACCTTCCCTAATCATCTCGATCTGGTTGT...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR CCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTAACGCTGGATGGATGTaGGCCTGGGTCCCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCNAGWM*AWVPGA
Trigger: GGCTCCAGGGACCCAGGCCCACATCCATCCAGCGTT...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR-3UTR CCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTAGCCAGCGGGAACGCTaGATGGATGTGGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCSQRER*MDVGLG
Trigger: ACCCAGGCCCACATCCATCCAGCGTTCCCGCTGGCT...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR CAA 90 bp TGGAGTTTTCCTTCTCTTAGGCAGTTACATTCTGGAGGAACCAGCTaGGTCAGCTCTTCCAGAGATTTCTCCGACCTGTACTCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: WSFPSLRQLHSGGTS*VSSSRDFSDLYSWQ
Trigger: CTGCCAGGAGTACAGGTCGGAGAAATCTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAGAATGTAACTGCCTAAGAGAAGGAAAACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569207.5
3UTR CCA 72 bp CTCCCTGTCTGTCCCACAGCCAGCGGGAACGCTGGATaGATGTGGGCCTGGGTCCCTGGAGCCCACGAGGTT +
Preference number: 3 (lower is better)
Translates to: LPVCPTASGNAG*MWAWVPGAHEV
Trigger: AACCTCGTGGGCTCCAGGGACCCAGGCCCACATCCATCCAGCGTTCCCGCTGGCTGTGGGACAGACAGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR CCA 72 bp CAGCGGGAACGCTGGATGGATGTGGGCCTGGGTCCCTaGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGG +
Preference number: 3 (lower is better)
Translates to: QRERWMDVGLGP*SPRGSCSFPKR
Trigger: CCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCCAGGGACCCAGGCCCACATCCATCCAGCGTTCCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR GCA 72 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTaGCACGAGTGGCCTGCCTCACTGCAAGCTGTGGCA +
Preference number: 3 (lower is better)
Translates to: HPTHCLSGAPCI*HEWPASLQAVA
Trigger: TGCCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR CCA 72 bp CACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTaGCCTGCCTCACTGCAAGCTGTGGCACAGATACGT +
Preference number: 3 (lower is better)
Translates to: HCLSGAPCICHE*PASLQAVAQIR
Trigger: ACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR GCA 72 bp GAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTaGAAGCTGTGGCACAGATACGTAGTTAGACATGGT +
Preference number: 3 (lower is better)
Translates to: EPLVSATSGLPH*KLWHRYVVRHG
Trigger: ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR TCA 72 bp CCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTaGTCCGGTGATGGAAGGCTGCGGCCTCCTAAAAGT +
Preference number: 3 (lower is better)
Translates to: PRGSCSFPKRKN*SGDGRLRPPKS
Trigger: ACTTTTAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
3UTR GCA 72 bp ACGACATCACCAGGAACCAGTTCTCGAGCAAGCAGGTaGTGGAGTTTTCCTTCTCTTAGGCAGTTACATTCT +
Preference number: 3 (lower is better)
Translates to: TTSPGTSSRASR*WSFPSLRQLHS
Trigger: AGAATGTAACTGCCTAAGAGAAGGAAAACTCCAGCACCTGCTTGCTCGAGAACTGGTTCCTGGTGATGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569207.5
3UTR CCA 72 bp CTTCTCTTAGGCAGTTACATTCTGGAGGAACCAGCTTaGTCAGCTCTTCCAGAGATTTCTCCGACCTGTACT +
Preference number: 3 (lower is better)
Translates to: LLLGSYILEEPA*SALPEISPTCT
Trigger: AGTACAGGTCGGAGAAATCTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAGAATGTAACTGCCTAAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS-3UTR GCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGGGCGCAGGCGTTGCCTaGGTCCCTAGGTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLGAGVA*VPRSPA
Trigger: CGCCGGGGACCTAGGGACGCAGGCAACGCCTGCGCC...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCCTTCTCCAGCGCCTaGTACTGGCGGCCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: HPTHCLSGAPCICHEWPASFSSA*YWRPPP
Trigger: GGGCGGGGGCCGCCAGTACCAGGCGCTGGAGAAGGA...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp ACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAGTCCCTCGACCATGGTaGGCGGGCGCAGGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: TVWCFCTGPSLSVPQPAGVPRPW*AGAGVA
Trigger: GGCAACGCCTGCGCCCGCTCACCATGGTCGAGGGAC...TCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGTCCAGCGCCTGGTACTaGCGGCCCCCGCCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGSSAWY*RPPPEK
Trigger: CTTCTCGGGCGGGGGCCGCCAGTACCAGGCGCTGGA...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGTGGCGGCCTCTTTGCTaGCGTCCGTCCCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLWRPLC*RPSLSA
Trigger: GGCAGACAGGGACGGACGTCAGCAAAGAGGCCGCCA...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGACGCCAGGGCCATCAATaGACCCTCGGTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TVWCFCTGPSLSVPQPAGRQGHQ*TLGGLP
Trigger: GGGCAGCCCACCGAGGGTGCATTGATGGCCCTGGCG...TCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGTCCAGCGCCTGGTACTaGCGGCCCCCGCCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWSSAWY*RPPPEK
Trigger: CTTCTCGGGCGGGGGCCGCCAGTACCAGGCGCTGGA...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AAAGTCTCCCCTGACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGATCCTTCTCCAGCGCCTaGTACTGGCGGCCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: KVSPDEETRQGPQSQPDRSFSSA*YWRPPP
Trigger: GGGCGGGGGCCGCCAGTACCAGGCGCTGGAGAAGGA...TCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGACTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGTGGGCCTGGGTCCCTaGAGCCCACGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLRSPLYLPRVACLTASCVGLGP*SPRGSC
Trigger: GCAGGAACCTCGTGGGCTCCAGGGACCCAGGCCCAC...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACTGGCGGCCTCTTTGCTaGCGTCCGTCCCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNWRPLC*RPSLSA
Trigger: GGCAGACAGGGACGGACGTCAGCAAAGAGGCCGCCA...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCTACCCCCAAGCTCTaGGCCGGTGGCCCATCCATG +
Preference number: 4 (lower is better)
Translates to: HPTHCLSGAPCICHEWPASTPKL*AGGPSM
Trigger: CATGGATGGGCCACCGGCGCAGAGCTTGGGGGTAGA...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262429.9
CDS-3UTR CCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGAACTCATTCCAGCCATaGGCCAGCCGGCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLNSFQP*ASRRCV
Trigger: GACGCAGCGCCGGCTGGCCCATGGCTGGAATGAGTT...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGGATGGGCAGACCCTCTaGAATGGCCGCCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLDGQTL*NGRHSQ
Trigger: CTGGCTGTGGCGGCCATTCCAGAGGGTCTGCCCATC...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGGTCCCGCACACTCCGTaGTGGCTGCCTGAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWVPHTP*WLPEGV
Trigger: GACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGAC...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGAACGCTGGATGGATGTaGGCCTGGGTCCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLNAGWM*AWVPGA
Trigger: GGCTCCAGGGACCCAGGCCCACATCCATCCAGCGTT...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACCTGCCGTGGCGATGCTaGCGGCGTCCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNLPWRC*RRPHTP
Trigger: AGGAGTATGAGGACGCCGTCAGCATCGCCACGGCAG...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAAGGACCAGCGTCACCATaGCGACGATGGGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQREGPASP*RRWADP
Trigger: AGGGTCTGCCCATCGTCGTCATGGTGACGCTGGTCC...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGGGACCAGCGTCACCATaGCGACGATGGGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQGPASP*RRWADP
Trigger: AGGGTCTGCCCATCGTCGTCATGGTGACGCTGGTCC...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGAGGCCACGATCGCCCCTaGCTCCTGCAGAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGGHDRP*LLQSLD
Trigger: ATCAAGGCTCTGCAGGAGTCAGGGGCGATCGTGGCC...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCATCCGTGGTGGCTGCCTaGAGGCGTCTTTGTCAACGG +
Preference number: 4 (lower is better)
Translates to: PTHCLSGAPCICHEWPASSVVAA*RRLCQR
Trigger: CCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGA...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGGCACCCTCGGTGGGCTaGCCCATCACGGCGTTCTTT +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQAPSVG*PITAFF
Trigger: AAAGAACGCCGTGATGGGGCAGCCCACCGAGGGTGC...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGTCAGCGGCAGGGGGATaGCCCCGTTGTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLSAAGG*PRCCTW
Trigger: CCATGTACAACAACGGGGGCATCCCCCTGCCGCTGA...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAAAGGCAGAATGACCTCTaGTGGGGCGTCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQRERQNDL*WGVSGR
Trigger: CCTGCCGCTGACGCCCCAGCAGAGGTCATTCTGCCT...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAGGCCCGGGATGGCTaGGCGCGCCCAAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMEARDG*ARPSLL
Trigger: CAGGAGGCTTGGGCGCGCGCAGCCATCCCGGGCCTC...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS-3UTR CCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGTCAATGCACCCTCGGTaGGCTGCCCCATCACGGCGT +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQSMHPR*AAPSRR
Trigger: ACGCCGTGATGGGGCAGCCCACCGAGGGTGCATTGA...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACCCTCCTCCCCGGACATaGCTTGCAGCTTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNPPPRT*LAASRC
Trigger: GCAACGGGAAGCTGCAAGCCATGTCCGGGGAGGAGG...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGCCAGCTGCCCCAGGATaGACCCCAGGACGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQPAAPG*TPGRSR
Trigger: TCTACTCCGTCCTGGGGTCCATCCTGGGGCAGCTGG...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGCCAGCTGCCCCAGGATaGACCCCAGGACGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWPAAPG*TPGRSR
Trigger: TCTACTCCGTCCTGGGGTCCATCCTGGGGCAGCTGG...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCCCAGGTTCTCCGTCTaGAAGACCCTCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ILPTASQEPLVSATSGLPPRFSV*KTLCSG
Trigger: CCCGCTGCAGAGGGTCTTCCAGACGGAGAACCTGGG...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTAGCCAGCGGGAACGCTaGATGGATGTGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PLRSPLYLPRVACLTASCSQRER*MDVGLG
Trigger: ACCCAGGCCCACATCCATCCAGCGTTCCCGCTGGCT...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTGTCCCTCGACCATGGTaGGCGGGCGCAGGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGVPRPW*AGAGVA
Trigger: GGCAACGCCTGCGCCCGCTCACCATGGTCGAGGGAC...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCTGCCGTGGCGATGCTaGCGGCGTCCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWLPWRC*RRPHTP
Trigger: AGGAGTATGAGGACGCCGTCAGCATCGCCACGGCAG...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGTCCGTGGTGGCTGCCTaGAGGCGTCTTTGTCAACGG +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQSVVAA*RRLCQR
Trigger: CCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGA...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTTGGCCCCTCCCATACTaGACCAGGGTCCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: PLRSPLYLPRVACLTASCWPLPY*TRVPMK
Trigger: CTTCATGGGGACCCTGGTGCAGTATGGGAGGGGCCA...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCGCCAGGGCCATCAATaGACCCTCGGTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLRQGHQ*TLGGLP
Trigger: GGGCAGCCCACCGAGGGTGCATTGATGGCCCTGGCG...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGTCAGCGGCAGGGGGATaGCCCCGTTGTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGSAAGG*PRCCTW
Trigger: CCATGTACAACAACGGGGGCATCCCCCTGCCGCTGA...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGAGACTTCAGGGCCACTaGGTCGTTCACCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWRLQGH*VVHPIP
Trigger: GGGGATGGGGTGAACGACGCAGTGGCCCTGAAGTCT...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACGTCCGTCCCTGTCTaGCCCATGGCGATCCCAATG +
Preference number: 4 (lower is better)
Translates to: TVWCFCTGPSLSVPQPAGTSVPV*PMAIPM
Trigger: CATTGGGATCGCCATGGGGCAGACAGGGACGGACGT...TCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCGAAGGTGCCGCGGAGTaGGGTCCACTACACATCTTC +
Preference number: 4 (lower is better)
Translates to: HPTHCLSGAPCICHEWPAEGAAE*GPLHIF
Trigger: GAAGATGTGTAGTGGACCGCACTCCGCGGCACCTTC...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCCCGGTGATGGAAGGCTaGGGCCTCCTAAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: HPTHCLSGAPCICHEWPAPVMEG*GLLKVS
Trigger: GGAGACTTTTAGGAGGCCGCAGCCTTCCATCACCGG...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGGGAGCCCCTTGTATCTaGCACGAGTGGCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWGAPCI*HEWPAS
Trigger: TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCC...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAATTCTGGGAACTCCTCTaGGCCGGTGGCCCATCCATG +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQREFWELL*AGGPSM
Trigger: CATGGATGGGCCACCGGCGCAGAGGAGTTCCCAGAA...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS-3UTR GCA 90 bp AAAGTCTCCCCTGACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGACCCCCAAGCCAGCTCTaGCGGCCCAGGTACTTTCTC +
Preference number: 4 (lower is better)
Translates to: KVSPDEETRQGPQSQPDRPPSQL*RPRYFL
Trigger: GAGAAAGTACCTGGGCCGGCAGAGCTGGCTTGGGGG...TCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS-3UTR CCA 90 bp AAAGTCTCCCCTGACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGGGCAGACCCTCTaGAATGGCCGCCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: KVSPDEETRQGPQSQPDRDGQTL*NGRHSQ
Trigger: CTGGCTGTGGCGGCCATTCCAGAGGGTCTGCCCATC...TCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGTCAATGCACCCTCGGTaGGCTGCCCCATCACGGCGT +
Preference number: 4 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWSMHPR*AAPSRR
Trigger: ACGCCGTGATGGGGCAGCCCACCGAGGGTGCATTGA...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGCCTCCTCCCCGGACATaGCTTGCAGCTTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRPPPRT*LAASRC
Trigger: GCAACGGGAAGCTGCAAGCCATGTCCGGGGAGGAGG...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGCCGCACACTCCGTGGTaGCTGCCTGAAGGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGPHTPW*LPEGVF
Trigger: AAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGG...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCGTGGGCCTGGGTCCCTaGAGCCCACGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLVGLGP*SPRGSC
Trigger: GCAGGAACCTCGTGGGCTCCAGGGACCCAGGCCCAC...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGCCTCATACTCCTTGGTaGGGACACTCACCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGPHTPW*GHSPGQ
Trigger: CTGCCCTGGTGAGTGTCCTCACCAAGGAGTATGAGG...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGCTCGGCTTCCCCGGTaGAACTGGATTCATCCACCA +
Preference number: 4 (lower is better)
Translates to: PLRSPLYLPRVACLTASCARLPR*NWIHPP
Trigger: TGGTGGATGAATCCAGTTTCACCGGGGAAGCCGAGC...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGGAAAAACTGATCCGGTaGTGGAAGGCTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGEKLIR*WKAAAS
Trigger: GGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTC...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTATGGGCCAGCCGGCGCTaGGTCACCGAGAACTCCGAC +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLWASRR*VTENSD
Trigger: GTCGGAGTTCTCGGTGACGCAGCGCCGGCTGGCCCA...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTTGGGCCAGCCGGCGCTaGGTCACCGAGAACTCCGAC +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGWASRR*VTENSD
Trigger: GTCGGAGTTCTCGGTGACGCAGCGCCGGCTGGCCCA...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGTGGCCCCTCCCATACTaGACCAGGGTCCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRWPLPY*TRVPMK
Trigger: CTTCATGGGGACCCTGGTGCAGTATGGGAGGGGCCA...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGGGTGCGGGGAGTGCTTaGTCTGTCTTCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWGAGSA*SVFRHL
Trigger: GAGATGCCTGAAGACAGAGCAAGCACTCCCCGCACC...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGATCGTGGTGCGGGGAGTaGTTGCTCTGTCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGSWCGE*LLCLQA
Trigger: TGCCTGAAGACAGAGCAAGCACTCCCCGCACCACGA...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGACGTCATCGTCGTGGTaGGGGGAGTGCTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWTSSSW*GECLLC
Trigger: ACAGAGCAAGCACTCCCCGCACCACGACGATGACGT...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGCCGGTGATGGAAGGCTaGGGCCTCCTAAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGPVMEG*GLLKVS
Trigger: GGAGACTTTTAGGAGGCCGCAGCCTTCCATCACCGG...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAACAGAATGACCTCTGCTaGGGCGTCAGCGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIREQNDLC*GVSGRG
Trigger: CCCCCTGCCGCTGACGCCCCAGCAGAGGTCATTCTG...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp TGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACGCTGGATGGATGTCAAGCTCTGCGCCGGTaGCCCATCCATGATGATGTT +
Preference number: 4 (lower is better)
Translates to: CTGPSLSVPQPAGTLDGCQALRR*PIHDDV
Trigger: AACATCATCATGGATGGGCCACCGGCGCAGAGCTTG...ACATCCATCCAGCGTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262429.9
CDS-3UTR CCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCGCACACTCCGTGGTaGCTGCCTGAAGGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWPHTPW*LPEGVF
Trigger: AAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGG...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp GGGATCCGGTCTCCGATCGAGAGAGATACGACATCACCAGGAACCAGTTCTCGACTGCCGTGGCGATGCTaGCGGCGTCCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: GIRSPIERDTTSPGTSSRLPWRC*RRPHTP
Trigger: AGGAGTATGAGGACGCCGTCAGCATCGCCACGGCAG...TCGAGAACTGGTTCCTGGTGATGTCGTATCTCTCTCGATCGGAGACCGGATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS-3UTR TCA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCGTAACTTCTTCACGATaGCCCGCTTCTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: HPTHCLSGAPCICHEWPAVTSSR*PASWPS
Trigger: GGATGGCCAAGAAGCGGGTCATCGTGAAGAAGTTAC...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCAGTAACTTCTTCACGATaGCCCGCTTCTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: PTHCLSGAPCICHEWPASVTSSR*PASWPS
Trigger: GGATGGCCAAGAAGCGGGTCATCGTGAAGAAGTTAC...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTAGACACACAGTCCCTTaGCCGTCATACCCAACTCCG +
Preference number: 4 (lower is better)
Translates to: ILPTASQEPLVSATSGLPRHTVP*PSYPTP
Trigger: CGGAGTTGGGTATGACGGTCAAGGGACTGTGTGTCT...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAGACACACAGTCCCTTaGCCGTCATACCCAACTCCG +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGRHTVP*PSYPTP
Trigger: CGGAGTTGGGTATGACGGTCAAGGGACTGTGTGTCT...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGCTTTGGGCTGGTCCTaGAGAACACGGACACCTTCC +
Preference number: 4 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRALGWS*RTRTPS
Trigger: GGAAGGTGTCCGTGTTCTTCAGGACCAGCCCAAAGC...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAAACAACCAGATCGAGATaGTTAGGGAAGGTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQRETTRSR*LGKVPR
Trigger: CCGCGGCACCTTCCCTAATCATCTCGATCTGGTTGT...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAGTGAGTCGGATGTCTaGAGGGATCCGGTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGSESDV*RDPVSD
Trigger: ATCGGAGACCGGATCCCTGCAGACATCCGACTCACT...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAAAGGCAGAATGACCTCTaGTGGGGCGTCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIRERQNDL*WGVSGR
Trigger: CCTGCCGCTGACGCCCCAGCAGAGGTCATTCTGCCT...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTACACTCCGTGGTGGCTaGCTGAAGGCGTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: ILPTASQEPLVSATSGLPTLRGG*LKASLS
Trigger: TGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGT...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AAAGTCTCCCCTGACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAACGTCATCGTCGTGGTaGGGGGAGTGCTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: KVSPDEETRQGPQSQPDRTSSSW*GECLLC
Trigger: ACAGAGCAAGCACTCCCCGCACCACGACGATGACGT...TCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAACTGCCACGAGTGGCCTaGCTCACTGCAAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIRELPRVA*LTASCG
Trigger: GCCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAG...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGATCCGACCTGTACTCCTaGATGAAGGCGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGSDLYS*MKATVT
Trigger: GGTCACTGTCGCCTTCATCCAGGAGTACAGGTCGGA...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGTCCGACCTGTACTCCTaGATGAAGGCGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQSDLYS*MKATVT
Trigger: GGTCACTGTCGCCTTCATCCAGGAGTACAGGTCGGA...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAACCAATCACGACCCCCTaGCCCCTCCCATACTGCACC +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIREPITTP*PLPYCT
Trigger: GGTGCAGTATGGGAGGGGCCAGGGGGTCGTGATTGG...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTACAGAATGACCTCTGCTaGGGCGTCAGCGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLQNDLC*GVSGRG
Trigger: CCCCCTGCCGCTGACGCCCCAGCAGAGGTCATTCTG...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGGACTCGGAGAGAACCTaGACTGCTTCCTTCACGCCA +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGDSERT*TASFTP
Trigger: TGGCGTGAAGGAAGCAGTCCAGGTTCTCTCCGAGTC...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTGACTCGGAGAGAACCTaGACTGCTTCCTTCACGCCA +
Preference number: 4 (lower is better)
Translates to: ILPTASQEPLVSATSGLPDSERT*TASFTP
Trigger: TGGCGTGAAGGAAGCAGTCCAGGTTCTCTCCGAGTC...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGACGATGTTTCTTCCTATaGCCAAGGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGRCFFL*PRPSPG
Trigger: CCCTGGAGACGGCCTTGGCCATAGGAAGAAACATCG...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGACGATGTTTCTTCCTATaGCCAAGGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TVWCFCTGPSLSVPQPAGRCFFL*PRPSPG
Trigger: CCCTGGAGACGGCCTTGGCCATAGGAAGAAACATCG...TCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGTCCCGCACACTCCGTaGTGGCTGCCTGAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMVPHTP*WLPEGV
Trigger: GACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGAC...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGATGTATCTGCCACGAGTaGCCTGCCTCACTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGCICHE*PASLQA
Trigger: AGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACA...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGCCTCCAGGAGGGCAATaGGCAGAGTGTGACCATCCT +
Preference number: 4 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRPPGGQ*AECDHP
Trigger: AGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGAACTCCTCTGCGCCGGTaGCCCATCCATGATGATGTT +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGTPLRR*PIHDDV
Trigger: AACATCATCATGGATGGGCCACCGGCGCAGAGGAGT...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS-3UTR TCA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCAACACTTCTCCGAACTaGGAGCTTTCCCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: HPTHCLSGAPCICHEWPANTSPN*ELSPVP
Trigger: TGGAACAGGGGAAAGCTCTCAGTTCGGAGAAGTGTT...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTAGGCCACGATCGCCCCTaGCTCCTGCAGAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLGHDRP*LLQSLD
Trigger: ATCAAGGCTCTGCAGGAGTCAGGGGCGATCGTGGCC...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCCTAAAAGTCTCCCCTaGCGAGGAGACACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLPKSLP*RGDTAG
Trigger: CCCTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGG...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGAGTGAGTCGGATGTCTaGAGGGATCCGGTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRSESDV*RDPVSD
Trigger: ATCGGAGACCGGATCCCTGCAGACATCCGACTCACT...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGAGGAGTTGTTTCCCTTaGGACCAGCCAATGAGCATG +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLRSCFP*DQPMSM
Trigger: CATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCT...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGCACCCTCGGTGGGCTaGCCCATCACGGCGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMAPSVG*PITAFF
Trigger: AAAGAACGCCGTGATGGGGCAGCCCACCGAGGGTGC...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGGGAGAGAACCTGGACTaGTTCCTTCACGCCAACTCT +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGGENLD*FLHANS
Trigger: AGAGTTGGCGTGAAGGAAGCAGTCCAGGTTCTCTCC...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGACTTGCAGCTTCCCGTTaGACAGGCCGATGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TVWCFCTGPSLSVPQPAGLAASR*TGRCFF
Trigger: GAAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAG...TCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCTCCCCGGACATGGCTTaGAGCTTCCCGTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLSPDMA*SFPLHR
Trigger: CCTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGA...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGATCGCCCCTGACTCCTaGAGAGCCTTGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLIAPDS*RALMIL
Trigger: CAAAATCATCAAGGCTCTGCAGGAGTCAGGGGCGAT...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTTTGATCCATAGGATCTaGATGGCGTTGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLRSPLYLPRVACLTASCLIHRI*MALRGL
Trigger: CAGCCCCCTCAACGCCATGCAGATCCTATGGATCAA...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGATTGATCCATAGGATCTaGATGGCGTTGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TVWCFCTGPSLSVPQPAGLIHRI*MALRGL
Trigger: CAGCCCCCTCAACGCCATGCAGATCCTATGGATCAA...TCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGAGTGGCCTGCCTCACTaGAAGCTGTGGCACAGATAC +
Preference number: 4 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWSGLPH*KLWHRY
Trigger: GTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACT...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTACTGCCACGAGTGGCCTaGCTCACTGCAAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLLPRVA*LTASCG
Trigger: GCCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAG...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTAACTCATTCCAGCCATaGGCCAGCCGGCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGNSFQP*ASRRCV
Trigger: GACGCAGCGCCGGCTGGCCCATGGCTGGAATGAGTT...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTACCAATCACGACCCCCTaGCCCCTCCCATACTGCACC +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLPITTP*PLPYCT
Trigger: GGTGCAGTATGGGAGGGGCCAGGGGGTCGTGATTGG...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGCCCCGTTGTTGTACATaGTGCAGTAGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGPRCCT*CSSGSP
Trigger: AGGTGATCCGCTACTGCACCATGTACAACAACGGGG...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTCCCAGGTTCTCCGTCTaGAAGACCCTCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGPRFSV*KTLCSG
Trigger: CCCGCTGCAGAGGGTCTTCCAGACGGAGAACCTGGG...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGATCTTCAGGGTGCATCTaGACTCTCTTGGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGSSGCI*TLLGLQ
Trigger: TTGCAGCCCCAAGAGAGTCCAGATGCACCCTGAAGA...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACTCTTCAGGGTGCATCTaGACTCTCTTGGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNSSGCI*TLLGLQ
Trigger: TTGCAGCCCCAAGAGAGTCCAGATGCACCCTGAAGA...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGAACGCTGGATGGATGTaGGCCTGGGTCCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMNAGWM*AWVPGA
Trigger: GGCTCCAGGGACCCAGGCCCACATCCATCCAGCGTT...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTAAGCGGGAACGCTGGATaGATGTGGGCCTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLSGNAG*MWAWVP
Trigger: AGGGACCCAGGCCCACATCCATCCAGCGTTCCCGCT...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTAAGCCAGCGGGAACGCTaGATGGATGTGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLSQRER*MDVGLG
Trigger: ACCCAGGCCCACATCCATCCAGCGTTCCCGCTGGCT...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGCACACTTCAGTTTTCTaGGAACTCCTCTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQHTSVF*ELLCAG
Trigger: ACCGGCGCAGAGGAGTTCCCAGAAAACTGAAGTGTG...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCCTCATACTCCTTGGTaGGGACACTCACCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLPHTPW*GHSPGQ
Trigger: CTGCCCTGGTGAGTGTCCTCACCAAGGAGTATGAGG...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CAGCTTGGTCAGCTCTTCCAGAGATTTCTCCGACCTGTACTCCTGGCAGGAAGCCCTCATACTCCTTGGTaGGGACACTCACCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QLGQLFQRFLRPVLLAGSPHTPW*GHSPGQ
Trigger: CTGCCCTGGTGAGTGTCCTCACCAAGGAGTATGAGG...GCTTCCTGCCAGGAGTACAGGTCGGAGAAATCTCTGGAAGAGCTGACCAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS-3UTR TCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAAAACACTTCTCCGAACTaGGAGCTTTCCCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQRENTSPN*ELSPVP
Trigger: TGGAACAGGGGAAAGCTCTCAGTTCGGAGAAGTGTT...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAAGGCACGAAGCCCATCTaGCGTTACAAGCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIREGTKPI*RYKLGH
Trigger: GTGACCCAGCTTGTAACGTCAGATGGGCTTCGTGCC...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCAGGCAGGTCAAGGCGTTaGAGAGATCGAAAAACACAA +
Preference number: 4 (lower is better)
Translates to: PTHCLSGAPCICHEWPASGRSRR*RDRKTQ
Trigger: TTGTGTTTTTCGATCTCTTCAACGCCTTGACCTGCC...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGAGCTCTGACAAAATaGAGACGGATGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: PLRSPLYLPRVACLTASCGALTK*RRMRPI
Trigger: GATTGGCCTCATCCGTCTTCATTTTGTCAGAGCTCC...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGGGAGCTCTGACAAAATaGAGACGGATGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQGALTK*RRMRPI
Trigger: GATTGGCCTCATCCGTCTTCATTTTGTCAGAGCTCC...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCGAAAAACTGATCCGGTaGTGGAAGGCTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLEKLIR*WKAAAS
Trigger: GGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTC...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTGGCGCAGGCGTTGCCTaGGTCCCTAGGTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCGAGVA*VPRSPA
Trigger: CGCCGGGGACCTAGGGACGCAGGCAACGCCTGCGCC...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCAGAGAAGAGTGTCAGTTaGTTTCCTAGCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: PTHCLSGAPCICHEWPASEKSVS*FPSLSM
Trigger: CATGGACAGGCTAGGAAAGCAACTGACACTCTTCTC...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGCCTCAGTCTTCAGACTaGATTTCACCGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQPQSSD*ISPPST
Trigger: AGTGGATGGCGGTGAAATGCAGTCTGAAGACTGAGG...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCCGTTGTTGTACATGGTaGAGTAGCGGATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: HPTHCLSGAPCICHEWPARCCTW*SSGSPL
Trigger: AAGAGGTGATCCGCTACTGCACCATGTACAACAACG...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCTTGCAGCTTCCCGTTaGACAGGCCGATGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWLAASR*TGRCFF
Trigger: GAAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAG...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTTCCCCGGACATGGCTTaGAGCTTCCCGTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGSPDMA*SFPLHR
Trigger: CCTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGA...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGATCGCCCCTGACTCCTaGAGAGCCTTGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQIAPDS*RALMIL
Trigger: CAAAATCATCAAGGCTCTGCAGGAGTCAGGGGCGAT...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGAGACTTCAGGGCCACTaGGTCGTTCACCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMRLQGH*VVHPIP
Trigger: GGGGATGGGGTGAACGACGCAGTGGCCCTGAAGTCT...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCGGCGATCCCAATGTCTaGAGACTTCAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLGDPNV*RLQGHC
Trigger: GCAGTGGCCCTGAAGTCTGCAGACATTGGGATCGCC...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTAACGTCCGTCCCTGTCTaGCCCATGGCGATCCCAATG +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLTSVPV*PMAIPM
Trigger: CATTGGGATCGCCATGGGGCAGACAGGGACGGACGT...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCGGTGCGGGGAGTGCTTaGTCTGTCTTCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLGAGSA*SVFRHL
Trigger: GAGATGCCTGAAGACAGAGCAAGCACTCCCCGCACC...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTAGGAGCCCCTTGTATCTaGCACGAGTGGCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLGAPCI*HEWPAS
Trigger: TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCC...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGCCACACAAAACGCTCTaGCCAAATCCTCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGPHKTL*PNPLSG
Trigger: GCCAGAAAGAGGATTTGGCCAGAGCGTTTTGTGTGG...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCTGGAGGAACCAGCTTaGTCAGCTCTTCCAGAGATT +
Preference number: 4 (lower is better)
Translates to: ILPTASQEPLVSATSGLPLEEPA*SALPEI
Trigger: AATCTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAG...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGCTGGAGGAACCAGCTTaGTCAGCTCTTCCAGAGATT +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGLEEPA*SALPEI
Trigger: AATCTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAG...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACGTCTGTTTTACTACATaGCTCGGCTTCCCCGGTGAA +
Preference number: 4 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNVCFTT*LGFPGE
Trigger: TTCACCGGGGAAGCCGAGCCATGTAGTAAAACAGAC...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAAGTCTGTTTTACTACATaGCTCGGCTTCCCCGGTGAA +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQREVCFTT*LGFPGE
Trigger: TTCACCGGGGAAGCCGAGCCATGTAGTAAAACAGAC...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAACCTCCAGGAGGGCAATaGGCAGAGTGTGACCATCCT +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIREPPGGQ*AECDHP
Trigger: AGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTGGCACGAAGCCCATCTaGCGTTACAAGCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGGTKPI*RYKLGH
Trigger: GTGACCCAGCTTGTAACGTCAGATGGGCTTCGTGCC...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp TGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACGCTGGATGGATGTCCAAGGCCCCTTTCATaGAGTAAATGTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: CTGPSLSVPQPAGTLDGCPRPLS*SKCLPD
Trigger: ATCAGGAAGACATTTACTTCATGAAAGGGGCCTTGG...ACATCCATCCAGCGTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAATGCATTCATGATGGCTaGGAAGTCATCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQRECIHDG*EVIIHQ
Trigger: CTGGTGGATGATGACTTCTCAGCCATCATGAATGCA...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACTGCATTCATGATGGCTaGGAAGTCATCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNCIHDG*EVIIHQ
Trigger: CTGGTGGATGATGACTTCTCAGCCATCATGAATGCA...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGCCTCCACTGCATTCATaGTGGCTGAGAAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWPPLHS*WLRSHH
Trigger: ATGATGACTTCTCAGCCATCATGAATGCAGTGGAGG...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGACCTCCACTGCATTCATaGTGGCTGAGAAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGPPLHS*WLRSHH
Trigger: ATGATGACTTCTCAGCCATCATGAATGCAGTGGAGG...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGGGAACATGTGGTTCCTaGGAAAGCCGATCTCAAATA +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLGTCGS*ESRSQI
Trigger: TATTTGAGATCGGCTTTCTCAGGAACCACATGTTCC...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTAAGAGGAAAAACTaGTCCGGTGATGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWPKRKN*SGDGRL
Trigger: CAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGG...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GGGATCCGGTCTCCGATCGAGAGAGATACGACATCACCAGGAACCAGTTCTCGAAGTGAGTCGGATGTCTaGAGGGATCCGGTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: GIRSPIERDTTSPGTSSRSESDV*RDPVSD
Trigger: ATCGGAGACCGGATCCCTGCAGACATCCGACTCACT...TCGAGAACTGGTTCCTGGTGATGTCGTATCTCTCTCGATCGGAGACCGGATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS-3UTR GCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGGAGAAGAGTGTCAGTTaGTTTCCTAGCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGEKSVS*FPSLSM
Trigger: CATGGACAGGCTAGGAAAGCAACTGACACTCTTCTC...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACAGAACAGAGAACGCTaGAGCAACCTAAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQREQNRER*SNLKSP
Trigger: TGGAGACTTTAGGTTGCTGCAGCGTTCTCTGTTCTG...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGACCGCCATCCACTTCTaGTCTGAACTGAATGGAATC +
Preference number: 4 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWTAIHF*SELNGI
Trigger: GATTCCATTCAGTTCAGAGCAGAAGTGGATGGCGGT...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGACCGCCATCCACTTCTaGTCTGAACTGAATGGAATC +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGTAIHF*SELNGI
Trigger: GATTCCATTCAGTTCAGAGCAGAAGTGGATGGCGGT...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAAACACTCCGTGGTGGCTaGCTGAAGGCGTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIRETLRGG*LKASLS
Trigger: TGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGT...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTTCGTGGTGCGGGGAGTaGTTGCTCTGTCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGSWCGE*LLCLQA
Trigger: TGCCTGAAGACAGAGCAAGCACTCCCCGCACCACGA...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTAGAAGGTGCCGCGGAGTaGGGTCCACTACACATCTTC +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLEGAAE*GPLHIF
Trigger: GAAGATGTGTAGTGGACCGCACTCCGCGGCACCTTC...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGAGCCCACGAGGTTCCTaGAGCTTTCCTAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRSPRGS*SFPKRK
Trigger: TTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCT...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCAGTGGCCTGCCTCACTaGAAGCTGTGGCACAGATAC +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLSGLPH*KLWHRY
Trigger: GTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACT...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAATCACTGTCATTTCATTaGCAGTCAGAGTCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQRESLSFH*QSESPS
Trigger: AGACGGGGACTCTGACTGCCAATGAAATGACAGTGA...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGATCACTGTCATTTCATTaGCAGTCAGAGTCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: TVWCFCTGPSLSVPQPAGSLSFH*QSESPS
Trigger: AGACGGGGACTCTGACTGCCAATGAAATGACAGTGA...TCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGTTTGAGCTTGTGCTTTaGGCTGGTCCTGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWFELVL*AGPEEH
Trigger: GTGTTCTTCAGGACCAGCCCAAAGCACAAGCTCAAA...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACCCTCACTGCAAGCTGTaGCACAGATACGTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNPHCKL*HRYVVR
Trigger: TCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGG...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGTTTATGATGAGGAAATaGGGCCTCCAGGAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQFMMRK*GLQEGN
Trigger: ATTGCCCTCCTGGAGGCCCCATTTCCTCATCATAAA...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGAAGGGGGTTCTTAAACTaGTCCAGGTATTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGRGFLN*SRYFFH
Trigger: GTGGAAGAAATACCTGGATCAGTTTAAGAACCCCCT...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCCAAGGCCCCTTTCATaGAGTAAATGTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ILPTASQEPLVSATSGLPPRPLS*SKCLPD
Trigger: ATCAGGAAGACATTTACTTCATGAAAGGGGCCTTGG...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAAAAAACACAAAACAAGTaGACGTCATCGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQREKTQNK*TSSSWC
Trigger: GCACCACGACGATGACGTTCACTTGTTTTGTGTTTT...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGAAAAACACAAAACAAGTaGACGTCATCGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGKTQNK*TSSSWC
Trigger: GCACCACGACGATGACGTTCACTTGTTTTGTGTTTT...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGAACATGTGGTTCCTaGGAAAGCCGATCTCAAATA +
Preference number: 4 (lower is better)
Translates to: PLRSPLYLPRVACLTASCGTCGS*ESRSQI
Trigger: TATTTGAGATCGGCTTTCTCAGGAACCACATGTTCC...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGGGTGTCTCTTCAGCCTaGATCATCTTAAACACTTCT +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLGVSSA*IILNTS
Trigger: AGAAGTGTTTAAGATGATGCAGGCTGAAGAGACACC...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAAGGAGAGAACCTGGACTaGTTCCTTCACGCCAACTCT +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIREGENLD*FLHANS
Trigger: AGAGTTGGCGTGAAGGAAGCAGTCCAGGTTCTCTCC...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTATGATTTTGAGCTTGTaGTTTGGGCTGGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ILPTASQEPLVSATSGLPMILSL*FGLVLK
Trigger: CTTCAGGACCAGCCCAAAGCACAAGCTCAAAATCAT...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGGGACTCTCTTGGGGCTaGAACAGTATTTTTCACATA +
Preference number: 4 (lower is better)
Translates to: THCLSGAPCICHEWPASLGLSWG*NSIFHI
Trigger: TATGTGAAAAATACTGTTGCAGCCCCAAGAGAGTCC...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp TGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACGCTGGATGGATGTTCTTCTCTTTCTCGATaGCTTTCAGCTCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: CTGPSLSVPQPAGTLDGCSSLSR*LSAHSV
Trigger: AACAGAGTGAGCTGAAAGCCATCGAGAAAGAGAAGA...ACATCCATCCAGCGTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AAAGTCTCCCCTGACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGCCAAATCCTCTTTCTaGCATTTGCACGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KVSPDEETRQGPQSQPDRAKSSF*HLHASL
Trigger: CAAGGAAGCGTGCAAATGCCAGAAAGAGGATTTGGC...TCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAACCCCGTTGTTGTACATaGTGCAGTAGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIREPRCCT*CSSGSP
Trigger: AGGTGATCCGCTACTGCACCATGTACAACAACGGGG...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AAAGTCTCCCCTGACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGATCTCAAATATCAGCTTaGTCTGAGAGCGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: KVSPDEETRQGPQSQPDRSQISA*SESGRS
Trigger: TGACCTGCCGCTCTCAGACCAAGCTGATATTTGAGA...TCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGTCTCAAATATCAGCTTaGTCTGAGAGCGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWSQISA*SESGRS
Trigger: TGACCTGCCGCTCTCAGACCAAGCTGATATTTGAGA...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGGCATCTGGACTCTCTTaGGGCTGCAACAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGASGLS*GCNSIF
Trigger: AAAAATACTGTTGCAGCCCCAAGAGAGTCCAGATGC...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTCACTGCAAGCTGTaGCACAGATACGTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWPHCKL*HRYVVR
Trigger: TCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGG...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGTGTATCTGCCACGAGTaGCCTGCCTCACTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMCICHE*PASLQA
Trigger: AGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACA...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACATCCACTTCTGCTCTaGACTGAATGGAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: QCGVSVQAPPCLSHSQREHPLLL*TEWNLF
Trigger: AAAGAGATTCCATTCAGTTCAGAGCAGAAGTGGATG...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACCTGTCCATGCTTTTCTaGAAAGGAGTTTTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNLSMLF*KGVLGV
Trigger: GACACCTAAAACTCCTTTGCAGAAAAGCATGGACAG...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCCTCAGTCTTCAGACTaGATTTCACCGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLPQSSD*ISPPST
Trigger: AGTGGATGGCGGTGAAATGCAGTCTGAAGACTGAGG...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCAGCCCACGAGGTTCCTaGAGCTTTCCTAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLSPRGS*SFPKRK
Trigger: TTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCT...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CCGGTCTCCGATCGAGAGAGATACGACATCACCAGGAACCAGTTCTCGAGCAAGCTGGAGGAACCAGCTTaGTCAGCTCTTCCAGAGATT +
Preference number: 4 (lower is better)
Translates to: PVSDRERYDITRNQFSSKLEEPA*SALPEI
Trigger: AATCTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAG...CTTGCTCGAGAACTGGTTCCTGGTGATGTCGTATCTCTCTCGATCGGAGACCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS-3UTR CCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGATGCTCGTGCTCAGCTaGAATCGGACAAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRMLVLS*NRTKFL
Trigger: CAAAAACTTTGTCCGATTCCAGCTGAGCACGAGCAT...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp AAAGTCTCCCCTGACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAATGCTCGTGCTCAGCTaGAATCGGACAAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KVSPDEETRQGPQSQPDRMLVLS*NRTKFL
Trigger: CAAAAACTTTGTCCGATTCCAGCTGAGCACGAGCAT...TCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGCATCCACTTCTGCTCTaGACTGAATGGAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRHPLLL*TEWNLF
Trigger: AAAGAGATTCCATTCAGTTCAGAGCAGAAGTGGATG...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTACCTAAGAGGAAAAACTaGTCCGGTGATGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLPKRKN*SGDGRL
Trigger: CAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGG...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AAAGTCTCCCCTGACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGGTGTCTCTTCAGCCTaGATCATCTTAAACACTTCT +
Preference number: 4 (lower is better)
Translates to: KVSPDEETRQGPQSQPDRGVSSA*IILNTS
Trigger: AGAAGTGTTTAAGATGATGCAGGCTGAAGAGACACC...TCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp AAAGTCTCCCCTGACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGATTCCTAGCCTGTCCATaGTTTTCTGCAAAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: KVSPDEETRQGPQSQPDRFLACP*FSAKEF
Trigger: AAACTCCTTTGCAGAAAAGCATGGACAGGCTAGGAA...TCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAACAGAACAGAGAACGCTaGAGCAACCTAAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIREQNRER*SNLKSP
Trigger: TGGAGACTTTAGGTTGCTGCAGCGTTCTCTGTTCTG...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAATACTCCCAGTCTCACTaGAGTGCAACACACTTCAGT +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIREYSQSH*SATHFS
Trigger: ACTGAAGTGTGTTGCACTGCAGTGAGACTGGGAGTA...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS-3UTR CCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTAGCGGGAACGCTGGATaGATGTGGGCCTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCSGNAG*MWAWVP
Trigger: AGGGACCCAGGCCCACATCCATCCAGCGTTCCCGCT...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp ACGACATCACCAGGAACCAGTTCTCGAGCAAGCAGGTGCTGGAGTTTTCCTTCTTCCGACCTGTACTCCTaGCAGGAAGCACATCAGATG +
Preference number: 4 (lower is better)
Translates to: TTSPGTSSRASRCWSFPSSDLYS*QEAHQM
Trigger: CATCTGATGTGCTTCCTGCCAGGAGTACAGGTCGGA...AGAAGGAAAACTCCAGCACCTGCTTGCTCGAGAACTGGTTCCTGGTGATGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS-3UTR TCA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAAAGGGGGTTCTTAAACTaGTCCAGGTATTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TRRHGRGHSHNQIEMIRERGFLN*SRYFFH
Trigger: GTGGAAGAAATACCTGGATCAGTTTAAGAACCCCCT...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTGGCAGGTCAAGGCGTTaGAGAGATCGAAAAACACAA +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGGRSRR*RDRKTQ
Trigger: TTGTGTTTTTCGATCTCTTCAACGCCTTGACCTGCC...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCTAAAAGTCTCCCCTaGCGAGGAGACACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCPKSLP*RGDTAG
Trigger: CCCTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGG...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTATCTCGAGCAAGCAGGTaGTGGAGTTTTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLSRASR*WSFPSL
Trigger: AAGAGAAGGAAAACTCCAGCACCTGCTTGCTCGAGA...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGTTTGAGCTTGTGCTTTaGGCTGGTCCTGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMFELVL*AGPEEH
Trigger: GTGTTCTTCAGGACCAGCCCAAAGCACAAGCTCAAA...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGTTTATGATGAGGAAATaGGGCCTCCAGGAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMFMMRK*GLQEGN
Trigger: ATTGCCCTCCTGGAGGCCCCATTTCCTCATCATAAA...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CTTCTCTTAGGCAGTTACATTCTGGAGGAACCAGCTTGGTCAGCTCTTCCAGAGGCACATCAGATGTGCTaGATGAAGGCGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: LLLGSYILEEPAWSALPEAHQMC*MKATVT
Trigger: GGTCACTGTCGCCTTCATCCAGCACATCTGATGTGC...CTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAGAATGTAACTGCCTAAGAGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS-3UTR TCA 90 bp GTCTCCGATCGAGAGAGATACGACATCACCAGGAACCAGTTCTCGAGCAAGCAGAGGGGGTTCTTAAACTaGTCCAGGTATTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VSDRERYDITRNQFSSKQRGFLN*SRYFFH
Trigger: GTGGAAGAAATACCTGGATCAGTTTAAGAACCCCCT...CTGCTTGCTCGAGAACTGGTTCCTGGTGATGTCGTATCTCTCTCGATCGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS-3UTR TCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTGCTCGGCTTCCCCGGTaGAACTGGATTCATCCACCA +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCARLPR*NWIHPP
Trigger: TGGTGGATGAATCCAGTTTCACCGGGGAAGCCGAGC...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR TCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTGCTTTGGGCTGGTCCTaGAGAACACGGACACCTTCC +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCALGWS*RTRTPS
Trigger: GGAAGGTGTCCGTGTTCTTCAGGACCAGCCCAAAGC...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTGTCCATGCTTTTCTaGAAAGGAGTTTTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLLSMLF*KGVLGV
Trigger: GACACCTAAAACTCCTTTGCAGAAAAGCATGGACAG...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTATGATTTTGAGCTTGTaGTTTGGGCTGGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGMILSL*FGLVLK
Trigger: CTTCAGGACCAGCCCAAAGCACAAGCTCAAAATCAT...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTGGCGATCCCAATGTCTaGAGACTTCAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCGDPNV*RLQGHC
Trigger: GCAGTGGCCCTGAAGTCTGCAGACATTGGGATCGCC...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTCCAGTCTCACTGCAGTaGAACACACTTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGPVSLQ*NTLQFS
Trigger: AGAAAACTGAAGTGTGTTGCACTGCAGTGAGACTGG...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS-3UTR TCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTACAACCAGATCGAGATaGTTAGGGAAGGTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCTTRSR*LGKVPR
Trigger: CCGCGGCACCTTCCCTAATCATCTCGATCTGGTTGT...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTATTCCTAGCCTGTCCATaGTTTTCTGCAAAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLFLACP*FSAKEF
Trigger: AAACTCCTTTGCAGAAAAGCATGGACAGGCTAGGAA...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTAGGAGTTGTTTCCCTTaGGACCAGCCAATGAGCATG +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCRSCFP*DQPMSM
Trigger: CATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCT...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCACACAAAACGCTCTaGCCAAATCCTCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCPHKTL*PNPLSG
Trigger: GCCAGAAAGAGGATTTGGCCAGAGCGTTTTGTGTGG...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR GCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCGTTGTTGTACATGGTaGAGTAGCGGATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCRCCTW*SSGSPL
Trigger: AAGAGGTGATCCGCTACTGCACCATGTACAACAACG...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTGCCAAATCCTCTTTCTaGCATTTGCACGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCAKSSF*HLHASL
Trigger: CAAGGAAGCGTGCAAATGCCAGAAAGAGGATTTGGC...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CCA 90 bp CATTGTGATTTAATAAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTGCATCTGGACTCTCTTaGGGCTGCAACAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: HCDLINSVVFLYRPLPVCASGLS*GCNSIF
Trigger: AAAAATACTGTTGCAGCCCCAAGAGAGTCCAGATGC...ACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTTATTAAATCACAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp GCCTCCCAGGCCAAGTTGGCACAGGGGGCAGGGCCAGGCATTTGCTaGACGCCCCCAGGCATCGCACCTGCCCTCCTCGGCACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ASQAKLAQGAGPGIC*TPPGIAPALLGTFQ
Trigger: CTGGAAGGTGCCGAGGAGGGCAGGTGCGATGCCTGGGGGCGTTCAGCAAATGCCTGGCCCTGCCCCCTGTGCCAACTTGGCCTGGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000567222.1
ENST00000624933.1
CDS GCA 90 bp TGCGGGCAGGGTCGGGGCGCTGCTGTCGAGAACACACAGCAGCTCTaGAGCGAGGAGGGTCAGCCCGGGTCTCACCTGAGAGCGGCAGGT +
Preference number: 5 (lower is better)
Translates to: CGQGRGAAVENTQQL*SEEGQPGSHLRAAG
Trigger: ACCTGCCGCTCTCAGGTGAGACCCGGGCTGACCCTCCTCGCTGCAGAGCTGCTGTGTGTTCTCGACAGCAGCGCCCCGACCCTGCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567629.1
CDS TCA 90 bp AGCCGAGTTTCTTCAGGAACTCGGAGACGCGTCCCTCGACCATGGTaGGCGGGCGCAGGCGTTGCCTGCGTCCCTAGGTCCCCGGCGAGG +
Preference number: 5 (lower is better)
Translates to: SRVSSGTRRRVPRPW*AGAGVACVPRSPAR
Trigger: CCTCGCCGGGGACCTAGGGACGCAGGCAACGCCTGCGCCCGCTCACCATGGTCGAGGGACGCGTCTCCGAGTTCCTGAAGAAACTCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp GTTGAGGCTAGACCCGCAGCAGGCGGTATGGTGGGAGTGGCCGGGTaGGGCCCTGCCGCTCAGACACAGCTGAGGCCAGCTTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: VEARPAAGGMVGVAG*GPAAQTQLRPASWS
Trigger: GGACCAGGAAGCTGGCCTCAGCTGTGTCTGAGCGGCAGGGCCTCACCCGGCCACTCCCACCATACCGCCTGCTGCGGGTCTAGCCTCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS GCA 90 bp ACGCTGAGCCAGAGCCGCTCAATGCTGCGGGCAGGGTCGGGGCGCTaGTGTCGAGAACACACAGCAGCTCTGCAGCGAGGAGGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: TLSQSRSMLRAGSGR*CREHTAALQRGGSA
Trigger: GGCTGACCCTCCTCGCTGCAGAGCTGCTGTGTGTTCTCGACAGCAGCGCCCCGACCCTGCCCGCAGCATTGAGCGGCTCTGGCTCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567629.1
CDS GCA 90 bp GATGTGAGCTGTGGCAGGAGGGCAGGGACTGCAGTCCCCAGCGTCTaGACCGCACCAGGGCTTGGAGAACAGGCCGGGGTGACCCTCGCT +
Preference number: 5 (lower is better)
Translates to: DVSCGRRAGTAVPSV*TAPGLGEQAGVTLA
Trigger: AGCGAGGGTCACCCCGGCCTGTTCTCCAAGCCCTGGTGCGGTGCAGACGCTGGGGACTGCAGTCCCTGCCCTCCTGCCACAGCTCACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS TCA 90 bp CCCGCTTCTTGGCCATCCGCAGCACTCCCAGGACCAGCGTCACCATaGCGACGATGGGCAGACCCTCTGGAATGGCCGCCACAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PASWPSAALPGPASP*RRWADPLEWPPQPG
Trigger: GCCTGGCTGTGGCGGCCATTCCAGAGGGTCTGCCCATCGTCGTCATGGTGACGCTGGTCCTGGGAGTGCTGCGGATGGCCAAGAAGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS CCA 90 bp GAGGGCAGGGACTGCAGTCCCCAGCGTCTGCACCGCACCAGGGCTTaGAGAACAGGCCGGGGTGACCCTCGCTCACCTCCTTCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: EGRDCSPQRLHRTRA*RTGRGDPRSPPSRR
Trigger: TCTTCTGGAAGGAGGTGAGCGAGGGTCACCCCGGCCTGTTCTCCAAGCCCTGGTGCGGTGCAGACGCTGGGGACTGCAGTCCCTGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS-3UTR CAA 90 bp ACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAGAGCGGGCGCAGGCGTaGCCTGCGTCCCTAGGTCCC +
Preference number: 5 (lower is better)
Translates to: TVWCFCTGPSLSVPQPAGERAQA*PASLGP
Trigger: GGGACCTAGGGACGCAGGCAACGCCTGCGCCCGCTC...TCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp TCCCCAGCGTCTGCACCGCACCAGGGCTTGGAGAACAGGCCGGGGTaGCCCTCGCTCACCTCCTTCCAGAAGATAAAGAGGGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SPASAPHQGLENRPG*PSLTSFQKIKRVPL
Trigger: CAGCGGGACCCTCTTTATCTTCTGGAAGGAGGTGAGCGAGGGTCACCCCGGCCTGTTCTCCAAGCCCTGGTGCGGTGCAGACGCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS GCA 90 bp CACCTTGATTCCCAGGCTGCCAGGCTCCTGTCCCCTCAGGGACTCTaGACCCTGCCCTCCAGCGACGCCCTCCATCCACATCCTCACATG +
Preference number: 5 (lower is better)
Translates to: HLDSQAARLLSPQGL*TLPSSDALHPHPHM
Trigger: CATGTGAGGATGTGGATGGAGGGCGTCGCTGGAGGGCAGGGTGCAGAGTCCCTGAGGGGACAGGAGCCTGGCAGCCTGGGAATCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565927.1
CDS TCA 90 bp AGAAACAGGCTCCAGGCTCCGCCCTCCGCAGAGCCCCTCATCAGCTaGGAGAGACCAGCCTCCAGCCAACTCCACACAGCAGGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: RNRLQAPPSAEPLIS*ERPASSQLHTAGLR
Trigger: CCTCAACCCTGCTGTGTGGAGTTGGCTGGAGGCTGGTCTCTCTCAGCTGATGAGGGGCTCTGCGGAGGGCGGAGCCTGGAGCCTGTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS GCA 90 bp ATGTTTGCCTCTCCCAGATGTGAGCTGTGGCAGGAGGGCAGGGACTaGAGTCCCCAGCGTCTGCACCGCACCAGGGCTTGGAGAACAGGC +
Preference number: 5 (lower is better)
Translates to: MFASPRCELWQEGRD*SPQRLHRTRAWRTG
Trigger: GCCTGTTCTCCAAGCCCTGGTGCGGTGCAGACGCTGGGGACTGCAGTCCCTGCCCTCCTGCCACAGCTCACATCTGGGAGAGGCAAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS GCA 90 bp GGAAAATGGAGGCAGGGTACCCGGCCAGGGTCCCCTCCCGCTTCCTaGACATGGGCAATCTGTGGTGTGGTCACATGGGTCACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GKWRQGTRPGSPPAS*TWAICGVVTWVTCL
Trigger: GAGGCAGGTGACCCATGTGACCACACCACAGATTGCCCATGTGCAGGAAGCGGGAGGGGACCCTGGCCGGGTACCCTGCCTCCATTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CCA 90 bp CAGGATGAGGGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTGGTaGCTGCCTGAAGGCGTCTTTGTCAACGGGCTCTACCCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: QDEGSAEDGVPHTPW*LPEGVFVNGLYPQA
Trigger: GGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCCCTCATCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS CCA 90 bp TGGAGGCAGGGTACCCGGCCAGGGTCCCCTCCCGCTTCCTGCACATaGGCAATCTGTGGTGTGGTCACATGGGTCACCTGCCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: WRQGTRPGSPPASCT*AICGVVTWVTCLIS
Trigger: GGAAATGAGGCAGGTGACCCATGTGACCACACCACAGATTGCCCATGTGCAGGAAGCGGGAGGGGACCCTGGCCGGGTACCCTGCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CCA 90 bp GCTGAAGGATGGCCGTCAGTAGTAGAGGGAGAGCTGGAGGGAAAATaGAGGCAGGGTACCCGGCCAGGGTCCCCTCCCGCTTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: AEGWPSVVEGELEGK*RQGTRPGSPPASCT
Trigger: TGTGCAGGAAGCGGGAGGGGACCCTGGCCGGGTACCCTGCCTCCATTTTCCCTCCAGCTCTCCCTCTACTACTGACGGCCATCCTTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS-3UTR CAA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCAAGGGGGCTGGGCAGGTaGAACACGGTGGACAGAGTG +
Preference number: 5 (lower is better)
Translates to: PTHCLSGAPCICHEWPASRGLGR*NTVDRV
Trigger: CACTCTGTCCACCGTGTTCAACCTGCCCAGCCCCCT...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS GCA 90 bp ATGAGGGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTGGTGGCTaGCTGAAGGCGTCTTTGTCAACGGGCTCTACCCCCAAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: MRALLRMVSRTLRGG*LKASLSTGSTPKLC
Trigger: GCAGAGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262429.9
ENST00000420010.6
ENST00000565631.5
CDS GCA 90 bp ATGAGGGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTGGTGGCTaGCTGAAGGCGTCTTTGTCAACGGGCTCTACCCCCAAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: MRALLRMVSRTLRGG*LKASLSTGSTPKPA
Trigger: AGCTGGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS GCA 90 bp TGGAGTTTGGGTGACGGGGCTGCACCTTCCCAACCCTTCCTATTCTaGAGCCTCCCCACCTTCTCTTGCGGCAGGGAAGGGCTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: WSLGDGAAPSQPFLF*SLPTFSCGREGLRA
Trigger: GGCTCTGAGCCCTTCCCTGCCGCAAGAGAAGGTGGGGAGGCTGCAGAATAGGAAGGGTTGGGAAGGTGCAGCCCCGTCACCCAAACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS GCA 90 bp ATGAGGGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTGGTGGCTaGCTGAAGGCGTCTTTGTCAACGGGCTCTACCCCCAAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: MRALLRMVSRTLRGG*LKASLSTGSTPKVL
Trigger: GAGCACCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567892.5
CDS GCA 90 bp ATGAGGGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTGGTGGCTaGCTGAAGGCGTCTTTGTCAACGGGCTCTACCCCCAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: MRALLRMVSRTLRGG*LKASLSTGSTPKLL
Trigger: GAGCAGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567222.1
ENST00000624933.1
CDS CCA 90 bp CACTCCCAGGACCAGCGTCACCATGACGACGATGGGCAGACCCTCTaGAATGGCCGCCACAGCCAGGCTGACCCCGATCGTGAACATACT +
Preference number: 5 (lower is better)
Translates to: HSQDQRHHDDDGQTL*NGRHSQADPDREHT
Trigger: AGTATGTTCACGATCGGGGTCAGCCTGGCTGTGGCGGCCATTCCAGAGGGTCTGCCCATCGTCGTCATGGTGACGCTGGTCCTGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CCA 90 bp CAGGATGAGGGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTGGTaGCTGCCTGAAGGCGTCTTTGTCAACGGGCTCTACCCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: QDEGSAEDGVPHTPW*LPEGVFVNGLYPQA
Trigger: AGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCCCTCATCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
ENST00000624933.1
CDS CCA 90 bp ACCAGGGCAGAGCCCAGCAGCAGCAGGATCAGGGGGTTCTTAAACTaGTCTGGGCACCTTGATTCCCAGGCTGCCAGGCTCCTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: TRAEPSSSRIRGFLN*SGHLDSQAARLLSP
Trigger: AGGGGACAGGAGCCTGGCAGCCTGGGAATCAAGGTGCCCAGACCAGTTTAAGAACCCCCTGATCCTGCTGCTGCTGGGCTCTGCCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565927.1
CDS CCA 90 bp CAGGATGAGGGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTGGTaGCTGCCTGAAGGCGTCTTTGTCAACGGGCTCTACCCCCAAGGT +
Preference number: 5 (lower is better)
Translates to: QDEGSAEDGVPHTPW*LPEGVFVNGLYPQG
Trigger: ACCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCCCTCATCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567892.5
CDS-3UTR CAA 90 bp GGAGCCCACGAGGTTCCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAGCGGGCGCAGGCGTaGCCTGCGTCCCTAGGTCCC +
Preference number: 5 (lower is better)
Translates to: GAHEVPAAFLRGKTDPVMERAQA*PASLGP
Trigger: GGGACCTAGGGACGCAGGCAACGCCTGCGCCCGCTC...CATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCTCGTGGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGAACGATGACCCGCTTCTaGGCCATCCGCAGCACTCCC +
Preference number: 5 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGTMTRF*AIRSTP
Trigger: GGGAGTGCTGCGGATGGCCAAGAAGCGGGTCATCGT...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTCTCCCCGGACATGGCTaGCAGCTTCCCGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: PLRSPLYLPRVACLTASCLPGHG*QLPVAQ
Trigger: CTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGAG...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGCTCCCCGGACATGGCTaGCAGCTTCCCGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQLPGHG*QLPVAQ
Trigger: CTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGAG...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp ATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTAGGATCTGCATGGCGTaGAGGGGGCTGGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ILPTASQEPLVSATSGLPRICMA*RGLGRL
Trigger: CAACCTGCCCAGCCCCCTCAACGCCATGCAGATCCT...AGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGAAGGATCTGCATGGCGTaGAGGGGGCTGGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGRICMA*RGLGRL
Trigger: CAACCTGCCCAGCCCCCTCAACGCCATGCAGATCCT...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCATGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCC +
Preference number: 5 (lower is better)
Translates to: PTHCLSGAPCICHEWPASCLKAS*STGSTP
Trigger: GGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCA...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGACCTCTCAGGAGCCCCTaGTATCTGCCACGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGPLRSP*YLPRVA
Trigger: GGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS GCA 90 bp AGCTCGCCCTTCTCCACGCTGTCCACCTCCTCCCCGGACATGGCTTaGAGCTTCCCGTTGCACAGGCCGATGTTTCTTCCTATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SSPFSTLSTSSPDMA*SFPLHRPMFLPMAK
Trigger: CTTGGCCATAGGAAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGAGGAGGTGGACAGCGTGGAGAAGGGCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CCA 90 bp CTTCAGGATGAGGGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTaGTGGCTGCCTGAAGGCGTCTTTGTCAACGGGCTCTACCCCCAA +
Preference number: 5 (lower is better)
Translates to: LQDEGSAEDGVPHTP*WLPEGVFVNGLYPQ
Trigger: TTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCCCTCATCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
ENST00000567892.5
ENST00000624933.1
CDS CCA 90 bp CGCTGCGTCACCGAGAACTCCGACAGCCCAGTGTGTAAGTCCACCTaGAAGGAGAGGTCAGGCACAAGCTCACTCATGGGCGCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: RCVTENSDSPVCKST*KERSGTSSLMGAAR
Trigger: CCTTGCTGCGCCCATGAGTGAGCTTGTGCCTGACCTCTCCTTCCAGGTGGACTTACACACTGGGCTGTCGGAGTTCTCGGTGACGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS CCA 90 bp CTCCAGCGGAAGCACTGGCTCTGTGCTCATACGGTTACGCACACGTaGCCAGATGGGTCCCCTGACTCCAAAGCGCATTCCTTCCCCCAC +
Preference number: 5 (lower is better)
Translates to: LQRKHWLCAHTVTHT*PDGSPDSKAHSFPH
Trigger: GTGGGGGAAGGAATGCGCTTTGGAGTCAGGGGACCCATCTGGCCACGTGTGCGTAACCGTATGAGCACAGAGCCAGTGCTTCCGCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CCA 90 bp TCCCCTCCCGCTTCCTGCACATGGGCAATCTGTGGTGTGGTCACATaGGTCACCTGCCTCATTTCCCACCTAGATCGTGGCCCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SPPASCTWAICGVVT*VTCLISHLDRGPSW
Trigger: CCAGGACGGGCCACGATCTAGGTGGGAAATGAGGCAGGTGACCCATGTGACCACACCACAGATTGCCCATGTGCAGGAAGCGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CCA 90 bp TACCCGGCCAGGGTCCCCTCCCGCTTCCTGCACATGGGCAATCTGTaGTGTGGTCACATGGGTCACCTGCCTCATTTCCCACCTAGATCG +
Preference number: 5 (lower is better)
Translates to: YPARVPSRFLHMGNL*CGHMGHLPHFPPRS
Trigger: CGATCTAGGTGGGAAATGAGGCAGGTGACCCATGTGACCACACCACAGATTGCCCATGTGCAGGAAGCGGGAGGGGACCCTGGCCGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS-3UTR CAA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCAGCGTCCTCATACTCCTaGGTGAGGACACTCACCAGG +
Preference number: 5 (lower is better)
Translates to: PTHCLSGAPCICHEWPASASSYS*VRTLTR
Trigger: CCTGGTGAGTGTCCTCACCAAGGAGTATGAGGACGC...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGACGATGACCCGCTTCTaGGCCATCCGCAGCACTCCC +
Preference number: 5 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWTMTRF*AIRSTP
Trigger: GGGAGTGCTGCGGATGGCCAAGAAGCGGGTCATCGT...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACTGATGACCGCATTGTaGGCAACACAGCCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: QCGVSVQAPPCLSHSQRELMTAL*ATQPAS
Trigger: GGAGGCGGGCTGTGTTGCCAACAATGCGGTCATCAG...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGATGTTGGCGGCCTCTTaGCTGACGTCCGTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQMLAAS*LTSVPV
Trigger: GACAGGGACGGACGTCAGCAAAGAGGCCGCCAACAT...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGAGGGGGCTGGGCAGGTaGAACACGGTGGACAGAGTG +
Preference number: 5 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRRGLGR*NTVDRV
Trigger: CACTCTGTCCACCGTGTTCAACCTGCCCAGCCCCCT...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACTGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCC +
Preference number: 5 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNCLKAS*STGSTP
Trigger: GGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCA...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp GCTCTGTGCTCATACGGTTACGCACACGTGGCCAGATGGGTCCCCTaGCTCCAAAGCGCATTCCTTCCCCCACACCACTTGGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ALCSYGYAHVARWVP*LQSAFLPPHHLASL
Trigger: CAAGCTGGCCAAGTGGTGTGGGGGAAGGAATGCGCTTTGGAGTCAGGGGACCCATCTGGCCACGTGTGCGTAACCGTATGAGCACAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS TCA 90 bp GAGCACAAAGGTGAGAGGTTAGGCGGGAAGAGACAACCTCCATCCTaGACCAAAGGGCACAGGCCTGCCTCACTGCTCCTGGGGCATGGC +
Preference number: 5 (lower is better)
Translates to: EHKGERLGGKRQPPS*TKGHRPASLLLGHG
Trigger: GCCATGCCCCAGGAGCAGTGAGGCAGGCCTGTGCCCTTTGGTTCAGGATGGAGGTTGTCTCTTCCCGCCTAACCTCTCACCTTTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS GCA 90 bp CTGTTGTCAGCAACAAACTCATTCCAGCCATGGGCCAGCCGGCGCTaGGTCACCGAGAACTCCGACAGCCCAGTGTGTAAGTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: LLSATNSFQPWASRR*VTENSDSPVCKSTW
Trigger: CCAGGTGGACTTACACACTGGGCTGTCGGAGTTCTCGGTGACGCAGCGCCGGCTGGCCCATGGCTGGAATGAGTTTGTTGCTGACAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS CCA 90 bp TCATCAATCAAGGCTTCCTCTTCGTCCTTCTCCAGCGCCTGGTACTaGCGGCCCCCGCCCGAGAAGCCGAGTTTCTTCAGGAACTCGGAG +
Preference number: 5 (lower is better)
Translates to: SSIKASSSSFSSAWY*RPPPEKPSFFRNSE
Trigger: CTCCGAGTTCCTGAAGAAACTCGGCTTCTCGGGCGGGGGCCGCCAGTACCAGGCGCTGGAGAAGGACGAAGAGGAAGCCTTGATTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS CCA 90 bp TTCCACACAGGTTCGCTGTTGTCAGCAACAAACTCATTCCAGCCATaGGCCAGCCGGCGCTGCGTCACCGAGAACTCCGACAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: FHTGSLLSATNSFQP*ASRRCVTENSDSPV
Trigger: CACTGGGCTGTCGGAGTTCTCGGTGACGCAGCGCCGGCTGGCCCATGGCTGGAATGAGTTTGTTGCTGACAACAGCGAACCTGTGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000565631.5
CDS CCA 90 bp GCAAGCATTCGCCGGGCACTCTGTACCTGTCGGAGAACATGCTATTaGGAGGCTGGAGTTTGGGTGACGGGGCTGCACCTTCCCAACCCT +
Preference number: 5 (lower is better)
Translates to: ASIRRALCTCRRTCY*EAGVWVTGLHLPNP
Trigger: AGGGTTGGGAAGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGAGTGCCCGGCGAATGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CCA 90 bp CACTCCCAGGACCAGCGTCACCATGACGACGATGGGCAGACCCTCTaGAATGGCCGCCACAGCCAGGCTGGATCGAAAGGTCAAATGAGT +
Preference number: 5 (lower is better)
Translates to: HSQDQRHHDDDGQTL*NGRHSQAGSKGQMS
Trigger: ACTCATTTGACCTTTCGATCCAGCCTGGCTGTGGCGGCCATTCCAGAGGGTCTGCCCATCGTCGTCATGGTGACGCTGGTCCTGGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564099.1
CDS CCA 90 bp CCTTCCCCCACACCACTTGGCCAGCTTGTTGAAGGGGATATTAAGTaGCGGAGCGGGTGGACTCCTGAGCACCTACTGAGTGGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: PSPTPLGQLVEGDIK*RSGWTPEHLLSGKP
Trigger: GGGCTTGCCACTCAGTAGGTGCTCAGGAGTCCACCCGCTCCGCCACTTAATATCCCCTTCAACAAGCTGGCCAAGTGGTGTGGGGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS-3UTR CAA 90 bp TGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACGCTGGATGGATGTTTTCTGATGACCGCATaGTTGGCAACACAGCCCGCC +
Preference number: 5 (lower is better)
Translates to: CTGPSLSVPQPAGTLDGCFLMTA*LATQPA
Trigger: GGCGGGCTGTGTTGCCAACAATGCGGTCATCAGAAA...ACATCCATCCAGCGTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTTTCTGATGACCGCATaGTTGGCAACACAGCCCGCC +
Preference number: 5 (lower is better)
Translates to: HPTHCLSGAPCICHEWPAFLMTA*LATQPA
Trigger: GGCGGGCTGTGTTGCCAACAATGCGGTCATCAGAAA...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp TGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACGCTGGATGGATGTGCTTGCAGCTTCCCGTaGCACAGGCCGATGTTTCTT +
Preference number: 5 (lower is better)
Translates to: CTGPSLSVPQPAGTLDGCACSFP*HRPMFL
Trigger: AAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAGC...ACATCCATCCAGCGTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp AAACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGATGTTGGCGGCCTCTTaGCTGACGTCCGTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: KQCGVSVQAPPCLSHSQRMLAAS*LTSVPV
Trigger: GACAGGGACGGACGTCAGCAAAGAGGCCGCCAACAT...CCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTCCAGGAGGGCAATGGGCAGAGTGTGACCATCCTACCCACTGCCTCTCAGGATGGTGCGGGGAGTGCTaGCTCTGTCTTCAGGCATCT +
Preference number: 5 (lower is better)
Translates to: PPGGQWAECDHPTHCLSGWCGEC*LCLQAS
Trigger: AGATGCCTGAAGACAGAGCAAGCACTCCCCGCACCA...TCCTGAGAGGCAGTGGGTAGGATGGTCACACTCTGCCCATTGCCCTCCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp GCATCACATTGTCCGGTGTGTGTACATGTTTGCCTCTCCCAGATGTaGGCTGTGGCAGGAGGGCAGGGACTGCAGTCCCCAGCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: ASHCPVCVHVCLSQM*AVAGGQGLQSPASA
Trigger: TGCAGACGCTGGGGACTGCAGTCCCTGCCCTCCTGCCACAGCTCACATCTGGGAGAGGCAAACATGTACACACACCGGACAATGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS GCA 90 bp CTCTGCGCCGGTGGCCCATCCATGATGATGTTGATCCATAGGATCTaGATGGCGTTGAGGGGGCTGGGCAGGTTGAACACGGTGGACAGA +
Preference number: 5 (lower is better)
Translates to: LCAGGPSMMMLIHRI*MALRGLGRLNTVDR
Trigger: TCTGTCCACCGTGTTCAACCTGCCCAGCCCCCTCAACGCCATGCAGATCCTATGGATCAACATCATCATGGATGGGCCACCGGCGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CCA 90 bp TCGCCGGGCACTCTGTACCTGTCGGAGAACATGCTATTGGGAGGCTaGAGTTTGGGTGACGGGGCTGCACCTTCCCAACCCTTCCTATTC +
Preference number: 5 (lower is better)
Translates to: SPGTLYLSENMLLGG*SLGDGAAPSQPFLF
Trigger: GAATAGGAAGGGTTGGGAAGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGAGTGCCCGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS-3UTR CAA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACAGGAGTTGTTTCCCTaGCGACCAGCCAATGAGCAT +
Preference number: 5 (lower is better)
Translates to: PTHCLSGAPCICHEWPASQELFP*RPANEH
Trigger: ATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTG...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGGTCAGAGTCCCCGTCTaGTCAGAACAGAGAACGCTG +
Preference number: 5 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGVRVPV*SEQRTL
Trigger: CAGCGTTCTCTGTTCTGACAAGACGGGGACTCTGAC...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGTCAGAGTCCCCGTCTaGTCAGAACAGAGAACGCTG +
Preference number: 5 (lower is better)
Translates to: PLRSPLYLPRVACLTASCVRVPV*SEQRTL
Trigger: CAGCGTTCTCTGTTCTGACAAGACGGGGACTCTGAC...ACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCAAAGACACACAGTCCCTaGACCGTCATACCCAACTCC +
Preference number: 5 (lower is better)
Translates to: PTHCLSGAPCICHEWPASKTHSP*TVIPNS
Trigger: GGAGTTGGGTATGACGGTCAAGGGACTGTGTGTCTT...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGTCCACCAGGATCATGTaGGCGGCCTCTTTGCTGACG +
Preference number: 5 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWSTRIM*AASLLT
Trigger: CGTCAGCAAAGAGGCCGCCAACATGATCCTGGTGGA...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGTGGTGCGGGGAGTGCTaGCTCTGTCTTCAGGCATCT +
Preference number: 5 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWWCGEC*LCLQAS
Trigger: AGATGCCTGAAGACAGAGCAAGCACTCCCCGCACCA...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCCTCTCAGGAGCCCCTaGTATCTGCCACGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLPLRSP*YLPRVA
Trigger: GGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGG...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp CGCTGCAGCAACCTAAAGTCTCCACGATGGGTAACTTCTTCACGATaGCCCGCTTCTTGGCCATCCGCAGCACTCCCAGGACCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: RCSNLKSPRWVTSSR*PASWPSAALPGPAS
Trigger: TGACGCTGGTCCTGGGAGTGCTGCGGATGGCCAAGAAGCGGGTCATCGTGAAGAAGTTACCCATCGTGGAGACTTTAGGTTGCTGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS TCA 90 bp TCTGTACCTGTCGGAGAACATGCTATTGGGAGGCTGGAGTTTGGGTaGCGGGGCTGCACCTTCCCAACCCTTCCTATTCTGCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SVPVGEHAIGRLEFG*RGCTFPTLPILQPP
Trigger: GGGAGGCTGCAGAATAGGAAGGGTTGGGAAGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS TCA 90 bp GAAGGAGAGGTCAGGCACAAGCTCACTCATGGGCGCAGCAAGGAATaGGGCAACAGGGTACAGACTCCCACTCTGAAAGGCAGCGGCTTC +
Preference number: 5 (lower is better)
Translates to: EGEVRHKLTHGRSKE*GNRVQTPTLKGSGF
Trigger: GAAGCCGCTGCCTTTCAGAGTGGGAGTCTGTACCCTGTTGCCTCATTCCTTGCTGCGCCCATGAGTGAGCTTGTGCCTGACCTCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS GCA 90 bp CTGTTGTCAGCAACAAACTCATTCCAGCCATGGGCCAGCCGGCGCTaGGTCACCGAGAACTCCGACAGCCCAGTGTGTAAGTCCACACAA +
Preference number: 5 (lower is better)
Translates to: LLSATNSFQPWASRR*VTENSDSPVCKSTQ
Trigger: TTGTGTGGACTTACACACTGGGCTGTCGGAGTTCTCGGTGACGCAGCGCCGGCTGGCCCATGGCTGGAATGAGTTTGTTGCTGACAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS GCA 90 bp CATTTTGCAAGCATTCGCCGGGCACTCTGTACCTGTCGGAGAACATaGTATTGGGAGGCTGGAGTTTGGGTGACGGGGCTGCACCTTCCC +
Preference number: 5 (lower is better)
Translates to: HFASIRRALCTCRRT*YWEAGVWVTGLHLP
Trigger: GGGAAGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGAGTGCCCGGCGAATGCTTGCAAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS GCA 90 bp GCTTCCTGCACATGGGCAATCTGTGGTGTGGTCACATGGGTCACCTaGCTCATTTCCCACCTAGATCGTGGCCCGTCCTGGCATAGAGCT +
Preference number: 5 (lower is better)
Translates to: ASCTWAICGVVTWVT*LISHLDRGPSWHRA
Trigger: AGCTCTATGCCAGGACGGGCCACGATCTAGGTGGGAAATGAGGCAGGTGACCCATGTGACCACACCACAGATTGCCCATGTGCAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CCA 90 bp GCACTCTGTACCTGTCGGAGAACATGCTATTGGGAGGCTGGAGTTTaGGTGACGGGGCTGCACCTTCCCAACCCTTCCTATTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: ALCTCRRTCYWEAGV*VTGLHLPNPSYSAA
Trigger: GGCTGCAGAATAGGAAGGGTTGGGAAGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CCA 90 bp GCTATCACTGGTGATAACAGCAGCACTGAGCTCCAGCGGAAGCACTaGCTCTGTGCTCATACGGTTACGCACACGTGGCCAGATGGGTCC +
Preference number: 5 (lower is better)
Translates to: AITGDNSSTELQRKH*LCAHTVTHTWPDGS
Trigger: GGACCCATCTGGCCACGTGTGCGTAACCGTATGAGCACAGAGCCAGTGCTTCCGCTGGAGCTCAGTGCTGCTGTTATCACCAGTGATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CCA 90 bp ATCCTGAACCAAAGGGCACAGGCCTGCCTCACTGCTCCTGGGGCATaGCTGGGAGCCACTTACAAGCTCATGAATCGGTCACACAGCTTC +
Preference number: 5 (lower is better)
Translates to: ILNQRAQACLTAPGA*LGATYKLMNRSHSF
Trigger: GAAGCTGTGTGACCGATTCATGAGCTTGTAAGTGGCTCCCAGCCATGCCCCAGGAGCAGTGAGGCAGGCCTGTGCCCTTTGGTTCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CCA 90 bp AACCTCCATCCTGAACCAAAGGGCACAGGCCTGCCTCACTGCTCCTaGGGCATGGCTGGGAGCCACTTACAAGCTCATGAATCGGTCACA +
Preference number: 5 (lower is better)
Translates to: NLHPEPKGTGLPHCS*GMAGSHLQAHESVT
Trigger: TGTGACCGATTCATGAGCTTGTAAGTGGCTCCCAGCCATGCCCCAGGAGCAGTGAGGCAGGCCTGTGCCCTTTGGTTCAGGATGGAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS-3UTR CAA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAAGAACATACTCAGGAGTaGTTTCCCTTGCGACCAGCC +
Preference number: 5 (lower is better)
Translates to: QCGVSVQAPPCLSHSQREEHTQE*FPLRPA
Trigger: GGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTC...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp GTGATGGAAGGCTGCGGCCTCCTAAAAGTCTCCCCTGACGAGGAGACACGGCAGAAGACACACAGTCCCTaGACCGTCATACCCAACTCC +
Preference number: 5 (lower is better)
Translates to: VMEGCGLLKVSPDEETRQKTHSP*TVIPNS
Trigger: GGAGTTGGGTATGACGGTCAAGGGACTGTGTGTCTT...CTGCCGTGTCTCCTCGTCAGGGGAGACTTTTAGGAGGCCGCAGCCTTCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAACTGATGACCGCATTGTaGGCAACACAGCCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: TRRHGRGHSHNQIEMIRELMTAL*ATQPAS
Trigger: GGAGGCGGGCTGTGTTGCCAACAATGCGGTCATCAG...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGGCTTGCAGCTTCCCGTaGCACAGGCCGATGTTTCTT +
Preference number: 5 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWACSFP*HRPMFL
Trigger: AAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAGC...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGGACTCCTGCAGAGCCTaGATGATTTTGAGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: THCLSGAPCICHEWPASLDSCRA*MILSLC
Trigger: GCACAAGCTCAAAATCATCAAGGCTCTGCAGGAGTC...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp ACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCGGCAGGTCAAGGCGTaGAAGAGATCGAAAAACACA +
Preference number: 5 (lower is better)
Translates to: THCLSGAPCICHEWPASLRQVKA*KRSKNT
Trigger: TGTGTTTTTCGATCTCTTCAACGCCTTGACCTGCCG...CAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp GCCCCAGGATGGACCCCAGGACGGAGTAGAGGAACATGTGGTTCCTaGGAAAGCCGATCTCAAATATCAGCTTGGTCTGAGAGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: APGWTPGRSRGTCGS*ESRSQISAWSESGR
Trigger: CCTGCCGCTCTCAGACCAAGCTGATATTTGAGATCGGCTTTCTCAGGAACCACATGTTCCTCTACTCCGTCCTGGGGTCCATCCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
ENST00000567892.5
CDS TCA 90 bp TGGCAGGAAGCACATCAGATGTGCTGTTTAAAGGTGGGGACTCCATaGAGCTCCTGTCCCGCCCAGCTTACCCTGACTGGGACCTCAGGA +
Preference number: 5 (lower is better)
Translates to: WQEAHQMCCLKVGTP*SSCPAQLTLTGTSG
Trigger: TCCTGAGGTCCCAGTCAGGGTAAGCTGGGCGGGACAGGAGCTTCATGGAGTCCCCACCTTTAAACAGCACATCTGATGTGCTTCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS TCA 90 bp ACACACAGCAGCTCTGCAGCGAGGAGGGTCAGCCCGGGTCTCACCTaGGAGCGGCAGGTCAAGGCGTTGAAGAGATCGAAAAACACAAAA +
Preference number: 5 (lower is better)
Translates to: THSSSAARRVSPGLT*ERQVKALKRSKNTK
Trigger: TTTTGTGTTTTTCGATCTCTTCAACGCCTTGACCTGCCGCTCTCAGGTGAGACCCGGGCTGACCCTCCTCGCTGCAGAGCTGCTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567629.1
CDS-3UTR CAA 90 bp CCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACACACAGGTTCGCTGTaGTCAGCAACAAACTCATTC +
Preference number: 5 (lower is better)
Translates to: PTHCLSGAPCICHEWPASHTGSL*SATNSF
Trigger: GAATGAGTTTGTTGCTGACAACAGCGAACCTGTGTG...TGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTGCATCTGGACTCTCTaGGGGCTGCAACAGTATTTT +
Preference number: 5 (lower is better)
Translates to: HPTHCLSGAPCICHEWPACIWTL*GLQQYF
Trigger: AAAATACTGTTGCAGCCCCAAGAGAGTCCAGATGCA...GGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp GCCCCAGGATGGACCCCAGGACGGAGTAGAGGAACATGTGGTTCCTaGGAAAGCCGATCTCAAATATCAGCTTGGTCTGCAGGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: APGWTPGRSRGTCGS*ESRSQISAWSAGRR
Trigger: CCTTCTCCCTGCAGACCAAGCTGATATTTGAGATCGGCTTTCTCAGGAACCACATGTTCCTCTACTCCGTCCTGGGGTCCATCCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567629.1
CDS GCA 90 bp CACAGTCACAACCAGATCGAGATGATTAGGGAAGGTGCCGCGGAGTaGGGTCCACTACACATCTTCAGGGTGCATCTGGACTCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: HSHNQIEMIREGAAE*GPLHIFRVHLDSLG
Trigger: CCCAAGAGAGTCCAGATGCACCCTGAAGATGTGTAGTGGACCGCACTCCGCGGCACCTTCCCTAATCATCTCGATCTGGTTGTGACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
CDS GCA 90 bp ATCCACATCCTCACATGGCTTTCCGTCTCATTTCACTCAGATCTCTaGCCAGATGCCACCTCCTCAGAGCACCAGCCTAGTGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: IHILTWLSVSFHSDL*PDATSSEHQPSASL
Trigger: CAGGGAGGCACTAGGCTGGTGCTCTGAGGAGGTGGCATCTGGGCAGAGATCTGAGTGAAATGAGACGGAAAGCCATGTGAGGATGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565927.1
CDS CCA 90 bp CCAACTCCGCTGACCTCGGCACGAAGCCCATCTGACGTTACAAGCTaGGTCACTGTCATTTCATTGGCAGTCAGAGTCCCCGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: PTPLTSARSPSDVTS*VTVISLAVRVPVLS
Trigger: TGACAAGACGGGGACTCTGACTGCCAATGAAATGACAGTGACCCAGCTTGTAACGTCAGATGGGCTTCGTGCCGAGGTCAGCGGAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS-3UTR CAA 90 bp AACAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGCACACAGGTTCGCTGTaGTCAGCAACAAACTCATTC +
Preference number: 5 (lower is better)
Translates to: NSVVFLYRPLPVCPTASGHTGSL*SATNSF
Trigger: GAATGAGTTTGTTGCTGACAACAGCGAACCTGTGTG...CCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTCCCATGAAGACGATGTaGCTGAGGGTGGTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGPMKTM*LRVVRS
Trigger: GGACCTCACCACCCTCAGCAACATCGTCTTCATGGG...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTACCCATGAAGACGATGTaGCTGAGGGTGGTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLPMKTM*LRVVRS
Trigger: GGACCTCACCACCCTCAGCAACATCGTCTTCATGGG...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp AGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAACAGAGCCTTGATGATTTaGAGCTTGTGCTTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SVVFLYRPLPVCPTASGNRALMI*SLCFGL
Trigger: CAGCCCAAAGCACAAGCTCAAAATCATCAAGGCTCT...GTTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp GCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCTATCCACCAGGATCATGTaGGCGGCCTCTTTGCTGACG +
Preference number: 5 (lower is better)
Translates to: AAFLRGKTDPVMEGCGLLSTRIM*AASLLT
Trigger: CGTCAGCAAAGAGGCCGCCAACATGATCCTGGTGGA...TAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAATGCATCTGGACTCTCTaGGGGCTGCAACAGTATTTT +
Preference number: 5 (lower is better)
Translates to: QCGVSVQAPPCLSHSQRECIWTL*GLQQYF
Trigger: AAAATACTGTTGCAGCCCCAAGAGAGTCCAGATGCA...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS CCA 90 bp CCACTTGGCCAGCTTGTTGAAGGGGATATTAAGTGGCGGAGCGGGTaGACTCCTGAGCACCTACTGAGTGGCAAGCCCTTTATCTCTAGA +
Preference number: 5 (lower is better)
Translates to: PLGQLVEGDIKWRSG*TPEHLLSGKPFISR
Trigger: TCTAGAGATAAAGGGCTTGCCACTCAGTAGGTGCTCAGGAGTCCACCCGCTCCGCCACTTAATATCCCCTTCAACAAGCTGGCCAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CCA 90 bp ACCAGCTTGGTCAGCTCTTCCAGAGATTTCTCCGACCTGTACTCCTaGCAGGAAGCACATCAGATGTGCTGGATGAAGGCGACAGTGACC +
Preference number: 5 (lower is better)
Translates to: TSLVSSSRDFSDLYS*QEAHQMCWMKATVT
Trigger: GGTCACTGTCGCCTTCATCCAGCACATCTGATGTGCTTCCTGCCAGGAGTACAGGTCGGAGAAATCTCTGGAAGAGCTGACCAAGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS-3UTR CAA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCGAACATACTCAGGAGTaGTTTCCCTTGCGACCAGCC +
Preference number: 5 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLEHTQE*FPLRPA
Trigger: GGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTC...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp AGCTCCCTGGCTCCTCCAGTGAACCAAAAAGTCCCAGGGAGGCTCTaGCTTACCAGTTACATTCTGGAGGAACCAGCTTGGTCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: SSLAPPVNQKVPGRL*LTSYILEEPAWSAL
Trigger: AAGAGCTGACCAAGCTGGTTCCTCCAGAATGTAACTGGTAAGTCAGAGCCTCCCTGGGACTTTTTGGTTCACTGGAGGAGCCAGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS GCA 90 bp GCCAGGCTGACCCCGATCGTGAACATACTCAGGAGTTGTTTCCCTTaGGACCAGCCAATGAGCATGATGAGACCGATTATGCCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: ARLTPIVNILRSCFP*DQPMSMMRPIMPKE
Trigger: CTCCTTTGGCATAATCGGTCTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGTCAGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS GCA 90 bp AACATGTGGTTCCTGAGAAAGCCGATCTCAAATATCAGCTTGGTCTaGAGGGAGAAGGTCACACGGGGGATTGTGTGCTGTCCACACCCC +
Preference number: 5 (lower is better)
Translates to: NMWFLRKPISNISLV*REKVTRGIVCCPHP
Trigger: GGGGTGTGGACAGCACACAATCCCCCGTGTGACCTTCTCCCTGCAGACCAAGCTGATATTTGAGATCGGCTTTCTCAGGAACCACATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567629.1
CDS-3UTR CAA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTCAGGAGTTGTTTCCCTaGCGACCAGCCAATGAGCAT +
Preference number: 5 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGQELFP*RPANEH
Trigger: ATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTG...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp TCTCAGGAGCCCCTTGTATCTGCCACGAGTGGCCTGCCTCACTGCAAGCTGTGGTCCTTAATGACTTCCTaGGATGGTAGAAGACACACA +
Preference number: 5 (lower is better)
Translates to: SQEPLVSATSGLPHCKLWSLMTS*DGRRHT
Trigger: TGTGTGTCTTCTACCATCCAAGGAAGTCATTAAGGA...CCACAGCTTGCAGTGAGGCAGGCCACTCGTGGCAGATACAAGGGGCTCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp ACGAGGAGACACGGCAGGGGCCACAGTCACAACCAGATCGAGATGATTAGGGAAGACTCCTGCAGAGCCTaGATGATTTTGAGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: TRRHGRGHSHNQIEMIREDSCRA*MILSLC
Trigger: GCACAAGCTCAAAATCATCAAGGCTCTGCAGGAGTC...TTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCCGGCAGGTCAAGGCGTaGAAGAGATCGAAAAACACA +
Preference number: 5 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLRQVKA*KRSKNT
Trigger: TGTGTTTTTCGATCTCTTCAACGCCTTGACCTGCCG...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp GCTGGCAGGAGAGGTAACCCTCACACTTGGCTTTGGGGACACAAATaGGGACTCTCTTTCCCTTGGCAGCTATCACTGGTGATAACAGCA +
Preference number: 5 (lower is better)
Translates to: AGRRGNPHTWLWGHK*GLSFPWQLSLVITA
Trigger: TGCTGTTATCACCAGTGATAGCTGCCAAGGGAAAGAGAGTCCTCATTTGTGTCCCCAAAGCCAAGTGTGAGGGTTACCTCTCCTGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS GCA 90 bp GAGAGAGATACGACATCACCAGGAACCAGTTCTCGAGCAAGCAGGTaGTGGAGTTTTCCTTCTCTTAGGCTGGATGAAGGCGACAGTGAC +
Preference number: 5 (lower is better)
Translates to: ERDTTSPGTSSRASR*WSFPSLRLDEGDSD
Trigger: GTCACTGTCGCCTTCATCCAGCCTAAGAGAAGGAAAACTCCAGCACCTGCTTGCTCGAGAACTGGTTCCTGGTGATGTCGTATCTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420010.6
CDS CCA 90 bp AAAACGCTCTGGCCAAATCCTCTTTCTGGCATTTGCACGCTTCCTTaGGGGGCAGGGCTGTCACCTTCTTCTCTTTCTCGATGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: KTLWPNPLSGICTLP*GAGLSPSSLSRWLS
Trigger: TGAAAGCCATCGAGAAAGAGAAGAAGGTGACAGCCCTGCCCCCCAAGGAAGCGTGCAAATGCCAGAAAGAGGATTTGGCCAGAGCGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS CCA 90 bp AAGGTGCCGCGGAGTGCGGTCCACTACACATCTTCAGGGTGCATCTaGACTCTCTTGGGGCTGCAACAGTATTTTTCACATAGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: KVPRSAVHYTSSGCI*TLLGLQQYFSHSLR
Trigger: CCTCAAACTATGTGAAAAATACTGTTGCAGCCCCAAGAGAGTCCAGATGCACCCTGAAGATGTGTAGTGGACCGCACTCCGCGGCACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
CDS CCA 90 bp AGAGATACGACATCACCAGGAACCAGTTCTCGAGCAAGCAGGTGCTaGAGTTTTCCTTCTCTTAGGCTGGATGAAGGCGACAGTGACCAC +
Preference number: 5 (lower is better)
Translates to: RDTTSPGTSSRASRC*SFPSLRLDEGDSDH
Trigger: GTGGTCACTGTCGCCTTCATCCAGCCTAAGAGAAGGAAAACTCCAGCACCTGCTTGCTCGAGAACTGGTTCCTGGTGATGTCGTATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420010.6
CDS CCA 90 bp ACCAGCTTGGTCAGCTCTTCCAGAGATTTCTCCGACCTGTACTCCTaGCAGGAAGCACATCAGATGTGCTGTTTAAAGGTGGGGACTCCA +
Preference number: 5 (lower is better)
Translates to: TSLVSSSRDFSDLYS*QEAHQMCCLKVGTP
Trigger: TGGAGTCCCCACCTTTAAACAGCACATCTGATGTGCTTCCTGCCAGGAGTACAGGTCGGAGAAATCTCTGGAAGAGCTGACCAAGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS-3UTR CAA 90 bp TGTGACCATCCTACCCACTGCCTCTCAGGAGCCCCTTGTATCTGCCACGAGTGGTCCTTAATGACTTCCTaGGATGGTAGAAGACACACA +
Preference number: 5 (lower is better)
Translates to: CDHPTHCLSGAPCICHEWSLMTS*DGRRHT
Trigger: TGTGTGTCTTCTACCATCCAAGGAAGTCATTAAGGA...CCACTCGTGGCAGATACAAGGGGCTCCTGAGAGGCAGTGGGTAGGATGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp AATTCCTTAATGACTTCCTTGGATGGTAGAAGACACACAGTCCCTTaGCCGTCATACCCAACTCCGCTGACCTCGGCACGAAGCCCATCT +
Preference number: 5 (lower is better)
Translates to: NSLMTSLDGRRHTVP*PSYPTPLTSARSPS
Trigger: AGATGGGCTTCGTGCCGAGGTCAGCGGAGTTGGGTATGACGGTCAAGGGACTGTGTGTCTTCTACCATCCAAGGAAGTCATTAAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS TCA 90 bp TTCCTAATGGTGAGACTCCTGAGACAGAGGAACAGGGCTGCCTTGTaGGGTGATGAGTTCCCTGTCACCAGAAGCCTATTTTGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: FLMVRLLRQRNRAAL*GDEFPVTRSLFCCQ
Trigger: TTGGCAGCAAAATAGGCTTCTGGTGACAGGGAACTCATCACCTCACAAGGCAGCCCTGTTCCTCTGTCTCAGGAGTCTCACCATTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565927.1
CDS TCA 90 bp AAGGGGATATTAAGTGGCGGAGCGGGTGGACTCCTGAGCACCTACTaGGTGGCAAGCCCTTTATCTCTAGACATCAGGGATGAAACACAA +
Preference number: 5 (lower is better)
Translates to: KGILSGGAGGLLSTY*VASPLSLDIRDETQ
Trigger: TTGTGTTTCATCCCTGATGTCTAGAGATAAAGGGCTTGCCACTCAGTAGGTGCTCAGGAGTCCACCCGCTCCGCCACTTAATATCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS-3UTR CAA 90 bp CAGTGTGGTGTTTCTGTACAGGCCCCTCCCTGTCTGTCCCACAGCCAGCGGGAATTTCCCACTGAGACATaGGAAAATTCCTTAATGACT +
Preference number: 5 (lower is better)
Translates to: QCGVSVQAPPCLSHSQREFPTET*ENSLMT
Trigger: AGTCATTAAGGAATTTTCCAATGTCTCAGTGGGAAA...TTCCCGCTGGCTGTGGGACAGACAGGGAGGGGCCTGTACAGAAACACCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS-3UTR CAA 90 bp ACGAGTGGCCTGCCTCACTGCAAGCTGTGGCACAGATACGTAGTTAGACATGGTAGAGCCTTGATGATTTaGAGCTTGTGCTTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TSGLPHCKLWHRYVVRHGRALMI*SLCFGL
Trigger: CAGCCCAAAGCACAAGCTCAAAATCATCAAGGCTCT...ACCATGTCTAACTACGTATCTGTGCCACAGCTTGCAGTGAGGCAGGCCACTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp ACTCCAGTTAAACCCAGAGTGAAGGTCATTTCCTACAAGGAAGGCTaGAGGATGGCCGTCAGTAGTAGAGGGAGAGCTCCTTCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: TPVKPRVKVISYKEG*RMAVSSRGRAPSRR
Trigger: TCTTCTGGAAGGAGCTCTCCCTCTACTACTGACGGCCATCCTTCAGCCTTCCTTGTAGGAAATGACCTTCACTCTGGGTTTAACTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566874.1
CDS TCA 90 bp ACTCCAGTTAAACCCAGAGTGAAGGTCATTTCCTACAAGGAAGGCTaGAGGATGGCCGTCAGTAGTAGAGGGAGAGCTGGAGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: TPVKPRVKVISYKEG*RMAVSSRGRAGGKM
Trigger: CATTTTCCCTCCAGCTCTCCCTCTACTACTGACGGCCATCCTTCAGCCTTCCTTGTAGGAAATGACCTTCACTCTGGGTTTAACTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS GCA 90 bp TCTTACCTGACCCCGATCGTGAACATACTCAGGAGTTGTTTCCCTTaGGACCAGCCAATGAGCATGATGAGACCGATTATGCCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SYLTPIVNILRSCFP*DQPMSMMRPIMPKE
Trigger: CTCCTTTGGCATAATCGGTCTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGTCAGGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS-3UTR CAA 90 bp CCTGCAGCTTTCCTAAGAGGAAAAACTGATCCGGTGATGGAAGGCTGCGGCCTCTTTCCCACTGAGACATaGGAAAATTCCTTAATGACT +
Preference number: 5 (lower is better)
Translates to: PAAFLRGKTDPVMEGCGLFPTET*ENSLMT
Trigger: AGTCATTAAGGAATTTTCCAATGTCTCAGTGGGAAA...GAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS TCA 90 bp TGTACATGGTGCAGTAGCGGATCACCTCTTCCAAGGCCCCTTTCATaGAGTAAATGTCTTCCTGATCCTCAGTCTTCAGACTGCATTTCA +
Preference number: 5 (lower is better)
Translates to: CTWCSSGSPLPRPLS*SKCLPDPQSSDCIS
Trigger: TGAAATGCAGTCTGAAGACTGAGGATCAGGAAGACATTTACTTCATGAAAGGGGCCTTGGAAGAGGTGATCCGCTACTGCACCATGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS GCA 90 bp TTCTCTTGTCCGACACTACCAAGGATACAACTTTCAGCAAACATTTaGCAAACTCTCCAGCTCCCTGGCTCCTCCAGTGAACCAAAAAGT +
Preference number: 5 (lower is better)
Translates to: FSCPTLPRIQLSANI*QTLQLPGSSSEPKS
Trigger: ACTTTTTGGTTCACTGGAGGAGCCAGGGAGCTGGAGAGTTTGGCAAATGTTTGCTGAAAGTTGTATCCTTGGTAGTGTCGGACAAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS TCA 90 bp AAAGAAAATGCTGACACGTGCTACAACATGGATACACCTTTAAGTTaGACCTTGAGGATGAAGTTAAGTGAAATAAACCAGTCACAAAAA +
Preference number: 5 (lower is better)
Translates to: KENADTCYNMDTPLS*TLRMKLSEINQSQK
Trigger: TTTTTGTGACTGGTTTATTTCACTTAACTTCATCCTCAAGGTTCAACTTAAAGGTGTATCCATGTTGTAGCACGTGTCAGCATTTTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS TCA 90 bp AAAGCAAAAAGGAGGAAACAACCCACCAATCTTTCAAGGGATGAATaGATGCATGAAACATGGTGTACACACACAATGAAATACTATTTA +
Preference number: 5 (lower is better)
Translates to: KAKRRKQPTNLSRDE*MHETWCTHTMKYYL
Trigger: TAAATAGTATTTCATTGTGTGTGTACACCATGTTTCATGCATTCATTCATCCCTTGAAAGATTGGTGGGTTGTTTCCTCCTTTTTGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS CAA 72 bp GACGCGTCCCTCGACCATGGTGAGCGGGCGCAGGCGTaGCCTGCGTCCCTAGGTCCCCGGCGAGGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: DASLDHGERAQA*PASLGPRRGPG
Trigger: TCCCGGGCCTCGCCGGGGACCTAGGGACGCAGGCAACGCCTGCGCCCGCTCACCATGGTCGAGGGACGCGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS CAA 90 bp GAACTCGGAGACGCGTCCCTCGACCATGGTGAGCGGGCGCAGGCGTaGCCTGCGTCCCTAGGTCCCCGGCGAGGCCCGGGATGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: ELGDASLDHGERAQA*PASLGPRRGPGWLR
Trigger: GCGCAGCCATCCCGGGCCTCGCCGGGGACCTAGGGACGCAGGCAACGCCTGCGCCCGCTCACCATGGTCGAGGGACGCGTCTCCGAGTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS GCA 72 bp TGTGGCAGGAGGGCAGGGACTGCAGTCCCCAGCGTCTaGACCGCACCAGGGCTTGGAGAACAGGCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: CGRRAGTAVPSV*TAPGLGEQAGV
Trigger: CACCCCGGCCTGTTCTCCAAGCCCTGGTGCGGTGCAGACGCTGGGGACTGCAGTCCCTGCCCTCCTGCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CCA 72 bp GCAGGGTTGAGGCTAGACCCGCAGCAGGCGGTATGGTaGGAGTGGCCGGGTGAGGCCCTGCCGCTCAGACAC +
Preference number: 6 (lower is better)
Translates to: AGLRLDPQQAVW*EWPGEALPLRH
Trigger: GTGTCTGAGCGGCAGGGCCTCACCCGGCCACTCCCACCATACCGCCTGCTGCGGGTCTAGCCTCAACCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CAA 90 bp CTGAGCCTCCCAGGCCAAGTTGGCACAGGGGGCAGGGCCAGGCATTaGCTGAACGCCCCCAGGCATCGCACCTGCCCTCCTCGGCACCTT +
Preference number: 6 (lower is better)
Translates to: LSLPGQVGTGGRARH*LNAPRHRTCPPRHL
Trigger: AAGGTGCCGAGGAGGGCAGGTGCGATGCCTGGGGGCGTTCAGCAAATGCCTGGCCCTGCCCCCTGTGCCAACTTGGCCTGGGAGGCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000567222.1
ENST00000624933.1
CDS GCA 72 bp AGCAGGCGGTATGGTGGGAGTGGCCGGGTGAGGCCCTaGCGCTCAGACACAGCTGAGGCCAGCTTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: SRRYGGSGRVRP*RSDTAEASFLV
Trigger: GACCAGGAAGCTGGCCTCAGCTGTGTCTGAGCGGCAGGGCCTCACCCGGCCACTCCCACCATACCGCCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CCA 72 bp ACAGCAGGGTTGAGGCTAGACCCGCAGCAGGCGGTATaGTGGGAGTGGCCGGGTGAGGCCCTGCCGCTCAGA +
Preference number: 6 (lower is better)
Translates to: TAGLRLDPQQAV*WEWPGEALPLR
Trigger: TCTGAGCGGCAGGGCCTCACCCGGCCACTCCCACCATACCGCCTGCTGCGGGTCTAGCCTCAACCCTGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CCA 72 bp GACTGCAGTCCCCAGCGTCTGCACCGCACCAGGGCTTaGAGAACAGGCCGGGGTGACCCTCGCTCACCTCCT +
Preference number: 6 (lower is better)
Translates to: DCSPQRLHRTRA*RTGRGDPRSPP
Trigger: AGGAGGTGAGCGAGGGTCACCCCGGCCTGTTCTCCAAGCCCTGGTGCGGTGCAGACGCTGGGGACTGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS TCA 72 bp TCTTCAGGAACTCGGAGACGCGTCCCTCGACCATGGTaGGCGGGCGCAGGCGTTGCCTGCGTCCCTAGGTCC +
Preference number: 6 (lower is better)
Translates to: SSGTRRRVPRPW*AGAGVACVPRS
Trigger: GGACCTAGGGACGCAGGCAACGCCTGCGCCCGCTCACCATGGTCGAGGGACGCGTCTCCGAGTTCCTGAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS GCA 72 bp CAGAGCCGCTCAATGCTGCGGGCAGGGTCGGGGCGCTaGTGTCGAGAACACACAGCAGCTCTGCAGCGAGGA +
Preference number: 6 (lower is better)
Translates to: QSRSMLRAGSGR*CREHTAALQRG
Trigger: TCCTCGCTGCAGAGCTGCTGTGTGTTCTCGACAGCAGCGCCCCGACCCTGCCCGCAGCATTGAGCGGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567629.1
CDS CAA 90 bp AGGATGGTGTCCCGCACACTCCGTGGTGGCTGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCCAAGCTCTGCGCCGGTGGCCCATCC +
Preference number: 6 (lower is better)
Translates to: RMVSRTLRGGCLKAS*STGSTPKLCAGGPS
Trigger: GGATGGGCCACCGGCGCAGAGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262429.9
ENST00000420010.6
ENST00000565631.5
CDS GCA 72 bp AGGCAGGGTACCCGGCCAGGGTCCCCTCCCGCTTCCTaGACATGGGCAATCTGTGGTGTGGTCACATGGGTC +
Preference number: 6 (lower is better)
Translates to: RQGTRPGSPPAS*TWAICGVVTWV
Trigger: GACCCATGTGACCACACCACAGATTGCCCATGTGCAGGAAGCGGGAGGGGACCCTGGCCGGGTACCCTGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CCA 72 bp GACCAGCGTCACCATGACGACGATGGGCAGACCCTCTaGAATGGCCGCCACAGCCAGGCTGACCCCGATCGT +
Preference number: 6 (lower is better)
Translates to: DQRHHDDDGQTL*NGRHSQADPDR
Trigger: ACGATCGGGGTCAGCCTGGCTGTGGCGGCCATTCCAGAGGGTCTGCCCATCGTCGTCATGGTGACGCTGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CCA 72 bp GGTACCCGGCCAGGGTCCCCTCCCGCTTCCTGCACATaGGCAATCTGTGGTGTGGTCACATGGGTCACCTGC +
Preference number: 6 (lower is better)
Translates to: GTRPGSPPASCT*AICGVVTWVTC
Trigger: GCAGGTGACCCATGTGACCACACCACAGATTGCCCATGTGCAGGAAGCGGGAGGGGACCCTGGCCGGGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CAA 72 bp TCCCGCACACTCCGTGGTGGCTGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCCAAGCTCTGCGCCGGT +
Preference number: 6 (lower is better)
Translates to: SRTLRGGCLKAS*STGSTPKLCAG
Trigger: ACCGGCGCAGAGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262429.9
ENST00000420010.6
ENST00000565631.5
CDS CAA 72 bp TCCCGCACACTCCGTGGTGGCTGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCCAAGCCAGCTCTGCCG +
Preference number: 6 (lower is better)
Translates to: SRTLRGGCLKAS*STGSTPKPALP
Trigger: CGGCAGAGCTGGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS CAA 90 bp AGGATGGTGTCCCGCACACTCCGTGGTGGCTGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCCAAGCCAGCTCTGCCGGCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: RMVSRTLRGGCLKAS*STGSTPKPALPAQV
Trigger: TACCTGGGCCGGCAGAGCTGGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416219.6
CDS GCA 72 bp ACCCGCAAACCGAGCGACCCCATCCTCTTCTCTTCCTaGAGGCAGAATGACCTCTGCTGGGGCGTCAGCGGC +
Preference number: 6 (lower is better)
Translates to: TRKPSDPILFSS*RQNDLCWGVSG
Trigger: GCCGCTGACGCCCCAGCAGAGGTCATTCTGCCTGCAGGAAGAGAAGAGGATGGGGTCGCTCGGTTTGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS GCA 72 bp CTGCTGAGGATGGTGTCCCGCACACTCCGTGGTGGCTaGCTGAAGGCGTCTTTGTCAACGGGCTCTACCCCC +
Preference number: 6 (lower is better)
Translates to: LLRMVSRTLRGG*LKASLSTGSTP
Trigger: GGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
ENST00000567892.5
ENST00000624933.1
CDS GCA 72 bp GGTGACGGGGCTGCACCTTCCCAACCCTTCCTATTCTaGAGCCTCCCCACCTTCTCTTGCGGCAGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: GDGAAPSQPFLF*SLPTFSCGREG
Trigger: CCCTTCCCTGCCGCAAGAGAAGGTGGGGAGGCTGCAGAATAGGAAGGGTTGGGAAGGTGCAGCCCCGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CCA 72 bp AAGGCTTCCTCTTCGTCCTTCTCCAGCGCCTGGTACTaGCGGCCCCCGCCCGAGAAGCCGAGTTTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: KASSSSFSSAWY*RPPPEKPSFFR
Trigger: CCTGAAGAAACTCGGCTTCTCGGGCGGGGGCCGCCAGTACCAGGCGCTGGAGAAGGACGAAGAGGAAGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS CCA 72 bp GAGGGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTaGTGGCTGCCTGAAGGCGTCTTTGTCAACGGGCTC +
Preference number: 6 (lower is better)
Translates to: EGSAEDGVPHTP*WLPEGVFVNGL
Trigger: GAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
ENST00000567892.5
ENST00000624933.1
CDS CAA 72 bp TCCCGCACACTCCGTGGTGGCTGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCCAAGGTGCTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SRTLRGGCLKAS*STGSTPKVLSW
Trigger: CCAGCTGAGCACCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567892.5
CDS CAA 90 bp TCCACGCTGTCCACCTCCTCCCCGGACATGGCTTGCAGCTTCCCGTaGCACAGGCCGATGTTTCTTCCTATGGCCAAGGCCGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: STLSTSSPDMACSFP*HRPMFLPMAKAVSR
Trigger: CCTGGAGACGGCCTTGGCCATAGGAAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGAGGAGGTGGACAGCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS GCA 72 bp CCACCTCCTCCCCGGACATGGCTTGCAGCTTCCCGTTaGACAGGCCGATGTTTCTTCCTATGGCCAAGGCCG +
Preference number: 6 (lower is better)
Translates to: PPPPRTWLAASR*TGRCFFLWPRP
Trigger: CGGCCTTGGCCATAGGAAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGAGGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CCA 72 bp GGCTCTGCTGAGGATGGTGTCCCGCACACTCCGTGGTaGCTGCCTGAAGGCGTCTTTGTCAACGGGCTCTAC +
Preference number: 6 (lower is better)
Translates to: GSAEDGVPHTPW*LPEGVFVNGLY
Trigger: GTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCTCAGCAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
ENST00000567892.5
ENST00000624933.1
CDS CCA 72 bp GACCAGCGTCACCATGACGACGATGGGCAGACCCTCTaGAATGGCCGCCACAGCCAGGCTGGATCGAAAGGT +
Preference number: 6 (lower is better)
Translates to: DQRHHDDDGQTL*NGRHSQAGSKG
Trigger: ACCTTTCGATCCAGCCTGGCTGTGGCGGCCATTCCAGAGGGTCTGCCCATCGTCGTCATGGTGACGCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564099.1
CDS CAA 72 bp TCCCGCACACTCCGTGGTGGCTGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCCAAGCTGCTCCGAACA +
Preference number: 6 (lower is better)
Translates to: SRTLRGGCLKAS*STGSTPKLLRT
Trigger: TGTTCGGAGCAGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567222.1
ENST00000624933.1
CDS CAA 90 bp AGGATGGTGTCCCGCACACTCCGTGGTGGCTGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCCAAGGTGCTCAGCTGGAATCGGACA +
Preference number: 6 (lower is better)
Translates to: RMVSRTLRGGCLKAS*STGSTPKVLSWNRT
Trigger: TGTCCGATTCCAGCTGAGCACCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567892.5
CDS TCA 72 bp GACACGGCAGGGGCCACAGTCACAACCAGATCGAGATaGTTAGGGAAGGTGCCGCGGAGTGCGGTCCACTAC +
Preference number: 6 (lower is better)
Translates to: DTAGATVTTRSR*LGKVPRSAVHY
Trigger: GTAGTGGACCGCACTCCGCGGCACCTTCCCTAATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
CDS TCA 72 bp AGCTCTGCAGCGAGGAGGGTCAGCCCGGGTCTCACCTaGGAGCGGCAGGTCAAGGCGTTGAAGAGATCGAAA +
Preference number: 6 (lower is better)
Translates to: SSAARRVSPGLT*ERQVKALKRSK
Trigger: TTTCGATCTCTTCAACGCCTTGACCTGCCGCTCTCAGGTGAGACCCGGGCTGACCCTCCTCGCTGCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567629.1
CDS GCA 72 bp GCAACAAACTCATTCCAGCCATGGGCCAGCCGGCGCTaGGTCACCGAGAACTCCGACAGCCCAGTGTGTAAG +
Preference number: 6 (lower is better)
Translates to: ATNSFQPWASRR*VTENSDSPVCK
Trigger: CTTACACACTGGGCTGTCGGAGTTCTCGGTGACGCAGCGCCGGCTGGCCCATGGCTGGAATGAGTTTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000565631.5
CDS CCA 72 bp CGCCGGGCACTCTGTACCTGTCGGAGAACATGCTATTaGGAGGCTGGAGTTTGGGTGACGGGGCTGCACCTT +
Preference number: 6 (lower is better)
Translates to: RRALCTCRRTCY*EAGVWVTGLHL
Trigger: AAGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGAGTGCCCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CCA 72 bp GAGCCCAGCAGCAGCAGGATCAGGGGGTTCTTAAACTaGTCTGGGCACCTTGATTCCCAGGCTGCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: EPSSSRIRGFLN*SGHLDSQAARL
Trigger: GAGCCTGGCAGCCTGGGAATCAAGGTGCCCAGACCAGTTTAAGAACCCCCTGATCCTGCTGCTGCTGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565927.1
CDS CAA 72 bp CTCCCATACTGCACCAGGGTCCCCATGAAGACGATGTaGCTGAGGGTGGTGAGGTCCCCACCGCCTGTCAAG +
Preference number: 6 (lower is better)
Translates to: LPYCTRVPMKTM*LRVVRSPPPVK
Trigger: CTTGACAGGCGGTGGGGACCTCACCACCCTCAGCAACATCGTCTTCATGGGGACCCTGGTGCAGTATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000563340.1
ENST00000565546.5
ENST00000565631.5
CDS CAA 72 bp TCCACCTCCTCCCCGGACATGGCTTGCAGCTTCCCGTaGCACAGGCCGATGTTTCTTCCTATGGCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: STSSPDMACSFP*HRPMFLPMAKA
Trigger: GGCCTTGGCCATAGGAAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGAGGAGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CAA 72 bp CTTCTCCACGCTGTCCACCTCCTCCCCGGACATGGCTaGCAGCTTCCCGTTGCACAGGCCGATGTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: LLHAVHLLPGHG*QLPVAQADVSS
Trigger: GGAAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGAGGAGGTGGACAGCGTGGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CAA 72 bp TCGCCGGGCACTCTGTACCTGTCGGAGAACATGCTATaGGGAGGCTGGAGTTTGGGTGACGGGGCTGCACCT +
Preference number: 6 (lower is better)
Translates to: SPGTLYLSENML*GGWSLGDGAAP
Trigger: AGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGAGTGCCCGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CAA 90 bp TGCAAGCATTCGCCGGGCACTCTGTACCTGTCGGAGAACATGCTATaGGGAGGCTGGAGTTTGGGTGACGGGGCTGCACCTTCCCAACCC +
Preference number: 6 (lower is better)
Translates to: CKHSPGTLYLSENML*GGWSLGDGAAPSQP
Trigger: GGGTTGGGAAGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGAGTGCCCGGCGAATGCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CAA 90 bp AGGATGGTGTCCCGCACACTCCGTGGTGGCTGCCTGAAGGCGTCTTaGTCAACGGGCTCTACCCCCAAGCTGCTCCGAACAAGACACAGA +
Preference number: 6 (lower is better)
Translates to: RMVSRTLRGGCLKAS*STGSTPKLLRTRHR
Trigger: TCTGTGTCTTGTTCGGAGCAGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCAGCCACCACGGAGTGTGCGGGACACCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567222.1
ENST00000624933.1
CDS TCA 72 bp TGTCCGGTGTGTGTACATGTTTGCCTCTCCCAGATGTaGGCTGTGGCAGGAGGGCAGGGACTGCAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: CPVCVHVCLSQM*AVAGGQGLQSP
Trigger: TGGGGACTGCAGTCCCTGCCCTCCTGCCACAGCTCACATCTGGGAGAGGCAAACATGTACACACACCGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS TCA 72 bp GGTGAGAGGTTAGGCGGGAAGAGACAACCTCCATCCTaGACCAAAGGGCACAGGCCTGCCTCACTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: GERLGGKRQPPS*TKGHRPASLLL
Trigger: CAGGAGCAGTGAGGCAGGCCTGTGCCCTTTGGTTCAGGATGGAGGTTGTCTCTTCCCGCCTAACCTCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS GCA 72 bp TTCTCCACGCTGTCCACCTCCTCCCCGGACATGGCTTaGAGCTTCCCGTTGCACAGGCCGATGTTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: FSTLSTSSPDMA*SFPLHRPMFLP
Trigger: AGGAAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAGCCATGTCCGGGGAGGAGGTGGACAGCGTGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS GCA 72 bp AGCATTCGCCGGGCACTCTGTACCTGTCGGAGAACATaGTATTGGGAGGCTGGAGTTTGGGTGACGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SIRRALCTCRRT*YWEAGVWVTGL
Trigger: CAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGAGTGCCCGGCGAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CCA 72 bp TGTGTGTACATGTTTGCCTCTCCCAGATGTGAGCTGTaGCAGGAGGGCAGGGACTGCAGTCCCCAGCGTCTG +
Preference number: 6 (lower is better)
Translates to: CVYMFASPRCEL*QEGRDCSPQRL
Trigger: CAGACGCTGGGGACTGCAGTCCCTGCCCTCCTGCCACAGCTCACATCTGGGAGAGGCAAACATGTACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CCA 72 bp AGGGTCCCCTCCCGCTTCCTGCACATGGGCAATCTGTaGTGTGGTCACATGGGTCACCTGCCTCATTTCCCA +
Preference number: 6 (lower is better)
Translates to: RVPSRFLHMGNL*CGHMGHLPHFP
Trigger: TGGGAAATGAGGCAGGTGACCCATGTGACCACACCACAGATTGCCCATGTGCAGGAAGCGGGAGGGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CAA 72 bp CATAGGATCTGCATGGCGTTGAGGGGGCTGGGCAGGTaGAACACGGTGGACAGAGTGATGAGACTCAGGGCG +
Preference number: 6 (lower is better)
Translates to: HRICMALRGLGR*NTVDRVMRLRA
Trigger: CGCCCTGAGTCTCATCACTCTGTCCACCGTGTTCAACCTGCCCAGCCCCCTCAACGCCATGCAGATCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CAA 72 bp CCAGGGACACAGGCTTGTCCACCAAGGTGCTGGGACTaGTTCAAAGACCCCGTGCAGATGGGGCAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: PGTQACPPRCWD*FKDPVQMGQRE
Trigger: CTCTCTCTGCCCCATCTGCACGGGGTCTTTGAACAAGTCCCAGCACCTTGGTGGACAAGCCTGTGTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS CAA 72 bp GGCGACCTCCCTTCTTTCAAGGGTCACCCAGTCCCTTaGCCTCATGCACCCCACGCCTCTGATGGCATCACA +
Preference number: 6 (lower is better)
Translates to: GDLPSFKGHPVP*PHAPHASDGIT
Trigger: TGTGATGCCATCAGAGGCGTGGGGTGCATGAGGCAAAGGGACTGGGTGACCCTTGAAAGAAGGGAGGTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CAA 90 bp CCCCACGCCTCTGATGGCATCACATTGTCCGGTGTGTGTACATGTTaGCCTCTCCCAGATGTGAGCTGTGGCAGGAGGGCAGGGACTGCA +
Preference number: 6 (lower is better)
Translates to: PHASDGITLSGVCTC*PLPDVSCGRRAGTA
Trigger: TGCAGTCCCTGCCCTCCTGCCACAGCTCACATCTGGGAGAGGCAAACATGTACACACACCGGACAATGTGATGCCATCAGAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CAA 90 bp CCTAAAGTCTCCACGATGGGTAACTTCTTCACGATGACCCGCTTCTaGGCCATCCGCAGCACTCCCAGGACCAGCGTCACCATGACGACG +
Preference number: 6 (lower is better)
Translates to: PKVSTMGNFFTMTRF*AIRSTPRTSVTMTT
Trigger: CGTCGTCATGGTGACGCTGGTCCTGGGAGTGCTGCGGATGGCCAAGAAGCGGGTCATCGTGAAGAAGTTACCCATCGTGGAGACTTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS TCA 72 bp TCATACGGTTACGCACACGTGGCCAGATGGGTCCCCTaGCTCCAAAGCGCATTCCTTCCCCCACACCACTTG +
Preference number: 6 (lower is better)
Translates to: SYGYAHVARWVP*LQSAFLPPHHL
Trigger: CAAGTGGTGTGGGGGAAGGAATGCGCTTTGGAGTCAGGGGACCCATCTGGCCACGTGTGCGTAACCGTATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS GCA 72 bp CACCAAGAGGTCCGTGACCTCAGTGAGTCGGATGTCTaGAGGGATCCGGTCTCCGATCGAGAGAGATACGAC +
Preference number: 6 (lower is better)
Translates to: HQEVRDLSESDV*RDPVSDRERYD
Trigger: GTCGTATCTCTCTCGATCGGAGACCGGATCCCTGCAGACATCCGACTCACTGAGGTCACGGACCTCTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565546.5
ENST00000565631.5
CDS CCA 72 bp ACTCTGTACCTGTCGGAGAACATGCTATTGGGAGGCTaGAGTTTGGGTGACGGGGCTGCACCTTCCCAACCC +
Preference number: 6 (lower is better)
Translates to: TLYLSENMLLGG*SLGDGAAPSQP
Trigger: GGGTTGGGAAGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGACAGGTACAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CCA 72 bp ACCGAGAACTCCGACAGCCCAGTGTGTAAGTCCACCTaGAAGGAGAGGTCAGGCACAAGCTCACTCATGGGC +
Preference number: 6 (lower is better)
Translates to: TENSDSPVCKST*KERSGTSSLMG
Trigger: GCCCATGAGTGAGCTTGTGCCTGACCTCTCCTTCCAGGTGGACTTACACACTGGGCTGTCGGAGTTCTCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS CCA 72 bp AAGCACTGGCTCTGTGCTCATACGGTTACGCACACGTaGCCAGATGGGTCCCCTGACTCCAAAGCGCATTCC +
Preference number: 6 (lower is better)
Translates to: KHWLCAHTVTHT*PDGSPDSKAHS
Trigger: GGAATGCGCTTTGGAGTCAGGGGACCCATCTGGCCACGTGTGCGTAACCGTATGAGCACAGAGCCAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CCA 72 bp GGTGATAACAGCAGCACTGAGCTCCAGCGGAAGCACTaGCTCTGTGCTCATACGGTTACGCACACGTGGCCA +
Preference number: 6 (lower is better)
Translates to: GDNSSTELQRKH*LCAHTVTHTWP
Trigger: TGGCCACGTGTGCGTAACCGTATGAGCACAGAGCCAGTGCTTCCGCTGGAGCTCAGTGCTGCTGTTATCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CAA 72 bp AGCGCATTCCTTCCCCCACACCACTTGGCCAGCTTGTaGAAGGGGATATTAAGTGGCGGAGCGGGTGGACTC +
Preference number: 6 (lower is better)
Translates to: SAFLPPHHLASL*KGILSGGAGGL
Trigger: GAGTCCACCCGCTCCGCCACTTAATATCCCCTTCAACAAGCTGGCCAAGTGGTGTGGGGGAAGGAATGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CAA 90 bp ATGTTGATCCATAGGATCTGCATGGCGTTGAGGGGGCTGGGCAGGTaGAACACGGTGGACAGAGTGATGAGACTCAGGGCGGAGATGCTC +
Preference number: 6 (lower is better)
Translates to: MLIHRICMALRGLGR*NTVDRVMRLRAEML
Trigger: GAGCATCTCCGCCCTGAGTCTCATCACTCTGTCCACCGTGTTCAACCTGCCCAGCCCCCTCAACGCCATGCAGATCCTATGGATCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS TCA 72 bp GTCGGAGAACATGCTATTGGGAGGCTGGAGTTTGGGTaGCGGGGCTGCACCTTCCCAACCCTTCCTATTCTG +
Preference number: 6 (lower is better)
Translates to: VGEHAIGRLEFG*RGCTFPTLPIL
Trigger: CAGAATAGGAAGGGTTGGGAAGGTGCAGCCCCGTCACCCAAACTCCAGCCTCCCAATAGCATGTTCTCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS TCA 72 bp GTCAGGCACAAGCTCACTCATGGGCGCAGCAAGGAATaGGGCAACAGGGTACAGACTCCCACTCTGAAAGGC +
Preference number: 6 (lower is better)
Translates to: VRHKLTHGRSKE*GNRVQTPTLKG
Trigger: GCCTTTCAGAGTGGGAGTCTGTACCCTGTTGCCTCATTCCTTGCTGCGCCCATGAGTGAGCTTGTGCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS TCA 72 bp GGACTCCATGAAGCTCCTGTCCCGCCCAGCTTACCCTaGCTGGGACCTCAGGAAATACTCACCTGGATGAAG +
Preference number: 6 (lower is better)
Translates to: GLHEAPVPPSLP*LGPQEILTWMK
Trigger: CTTCATCCAGGTGAGTATTTCCTGAGGTCCCAGTCAGGGTAAGCTGGGCGGGACAGGAGCTTCATGGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS TCA 72 bp GCACATCAGATGTGCTGTTTAAAGGTGGGGACTCCATaGAGCTCCTGTCCCGCCCAGCTTACCCTGACTGGG +
Preference number: 6 (lower is better)
Translates to: AHQMCCLKVGTP*SSCPAQLTLTG
Trigger: CCCAGTCAGGGTAAGCTGGGCGGGACAGGAGCTTCATGGAGTCCCCACCTTTAAACAGCACATCTGATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS GCA 72 bp GGTGGCCCATCCATGATGATGTTGATCCATAGGATCTaGATGGCGTTGAGGGGGCTGGGCAGGTTGAACACG +
Preference number: 6 (lower is better)
Translates to: GGPSMMMLIHRI*MALRGLGRLNT
Trigger: CGTGTTCAACCTGCCCAGCCCCCTCAACGCCATGCAGATCCTATGGATCAACATCATCATGGATGGGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CCA 72 bp TGCCCTCCAGCGACGCCCTCCATCCACATCCTCACATaGCTTTCCGTCTCATTTCACTCAGATCTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: CPPATPSIHILT*LSVSFHSDLCP
Trigger: TGGGCAGAGATCTGAGTGAAATGAGACGGAAAGCCATGTGAGGATGTGGATGGAGGGCGTCGCTGGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565927.1
CDS CCA 72 bp GCTTCCTGCACATGGGCAATCTGTGGTGTGGTCACATaGGTCACCTGCCTCATTTCCCACCTAGATCGTGGC +
Preference number: 6 (lower is better)
Translates to: ASCTWAICGVVT*VTCLISHLDRG
Trigger: GCCACGATCTAGGTGGGAAATGAGGCAGGTGACCCATGTGACCACACCACAGATTGCCCATGTGCAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CAA 72 bp CAAAGCGCATTCCTTCCCCCACACCACTTGGCCAGCTaGTTGAAGGGGATATTAAGTGGCGGAGCGGGTGGA +
Preference number: 6 (lower is better)
Translates to: QSAFLPPHHLAS*LKGILSGGAGG
Trigger: TCCACCCGCTCCGCCACTTAATATCCCCTTCAACAAGCTGGCCAAGTGGTGTGGGGGAAGGAATGCGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CAA 90 bp GGCCGCCACAGCCAGGCTGACCCCGATCGTGAACATACTCAGGAGTaGTTTCCCTTGCGACCAGCCAATGAGCATGATGAGACCGATTAT +
Preference number: 6 (lower is better)
Translates to: GRHSQADPDREHTQE*FPLRPANEHDETDY
Trigger: ATAATCGGTCTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGTCAGCCTGGCTGTGGCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS GCA 72 bp AACCAGATCGAGATGATTAGGGAAGGTGCCGCGGAGTaGGGTCCACTACACATCTTCAGGGTGCATCTGGAC +
Preference number: 6 (lower is better)
Translates to: NQIEMIREGAAE*GPLHIFRVHLD
Trigger: GTCCAGATGCACCCTGAAGATGTGTAGTGGACCGCACTCCGCGGCACCTTCCCTAATCATCTCGATCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
CDS CCA 72 bp CTGACCTCGGCACGAAGCCCATCTGACGTTACAAGCTaGGTCACTGTCATTTCATTGGCAGTCAGAGTCCCC +
Preference number: 6 (lower is better)
Translates to: LTSARSPSDVTS*VTVISLAVRVP
Trigger: GGGGACTCTGACTGCCAATGAAATGACAGTGACCCAGCTTGTAACGTCAGATGGGCTTCGTGCCGAGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS CCA 72 bp CAGCTTGTTGAAGGGGATATTAAGTGGCGGAGCGGGTaGACTCCTGAGCACCTACTGAGTGGCAAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: QLVEGDIKWRSG*TPEHLLSGKPF
Trigger: AAAGGGCTTGCCACTCAGTAGGTGCTCAGGAGTCCACCCGCTCCGCCACTTAATATCCCCTTCAACAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CCA 72 bp ACACCACTTGGCCAGCTTGTTGAAGGGGATATTAAGTaGCGGAGCGGGTGGACTCCTGAGCACCTACTGAGT +
Preference number: 6 (lower is better)
Translates to: TPLGQLVEGDIK*RSGWTPEHLLS
Trigger: ACTCAGTAGGTGCTCAGGAGTCCACCCGCTCCGCCACTTAATATCCCCTTCAACAAGCTGGCCAAGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CAA 90 bp CCCTCACACTTGGCTTTGGGGACACAAATGAGGACTCTCTTTCCCTaGGCAGCTATCACTGGTGATAACAGCAGCACTGAGCTCCAGCGG +
Preference number: 6 (lower is better)
Translates to: PSHLALGTQMRTLFP*AAITGDNSSTELQR
Trigger: CCGCTGGAGCTCAGTGCTGCTGTTATCACCAGTGATAGCTGCCAAGGGAAAGAGAGTCCTCATTTGTGTCCCCAAAGCCAAGTGTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CAA 90 bp CCCAGGGAGGCTCTGACTTACCAGTTACATTCTGGAGGAACCAGCTaGGTCAGCTCTTCCAGAGATTTCTCCGACCTGTACTCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: PREALTYQLHSGGTS*VSSSRDFSDLYSWQ
Trigger: CTGCCAGGAGTACAGGTCGGAGAAATCTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAGAATGTAACTGGTAAGTCAGAGCCTCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS TCA 72 bp AACCTAAAGTCTCCACGATGGGTAACTTCTTCACGATaGCCCGCTTCTTGGCCATCCGCAGCACTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: NLKSPRWVTSSR*PASWPSAALPG
Trigger: TCCTGGGAGTGCTGCGGATGGCCAAGAAGCGGGTCATCGTGAAGAAGTTACCCATCGTGGAGACTTTAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS TCA 72 bp ATACCCAACTCCGCTGACCTCGGCACGAAGCCCATCTaGCGTTACAAGCTGGGTCACTGTCATTTCATTGGC +
Preference number: 6 (lower is better)
Translates to: IPNSADLGTKPI*RYKLGHCHFIG
Trigger: GCCAATGAAATGACAGTGACCCAGCTTGTAACGTCAGATGGGCTTCGTGCCGAGGTCAGCGGAGTTGGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS TCA 72 bp ATGACTTCCTTGGATGGTAGAAGACACACAGTCCCTTaGCCGTCATACCCAACTCCGCTGACCTCGGCACGA +
Preference number: 6 (lower is better)
Translates to: MTSLDGRRHTVP*PSYPTPLTSAR
Trigger: TCGTGCCGAGGTCAGCGGAGTTGGGTATGACGGTCAAGGGACTGTGTGTCTTCTACCATCCAAGGAAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS GCA 72 bp CTCACATGGCTTTCCGTCTCATTTCACTCAGATCTCTaGCCAGATGCCACCTCCTCAGAGCACCAGCCTAGT +
Preference number: 6 (lower is better)
Translates to: LTWLSVSFHSDL*PDATSSEHQPS
Trigger: ACTAGGCTGGTGCTCTGAGGAGGTGGCATCTGGGCAGAGATCTGAGTGAAATGAGACGGAAAGCCATGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565927.1
CDS GCA 72 bp CCTGACTCCTGCAGAGCCTTGATGATTTTGAGCTTGTaGTTTGGGCTGGTCCTGAAGAACACGGACACCTGG +
Preference number: 6 (lower is better)
Translates to: PDSCRALMILSL*FGLVLKNTDTW
Trigger: CCAGGTGTCCGTGTTCTTCAGGACCAGCCCAAAGCACAAGCTCAAAATCATCAAGGCTCTGCAGGAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567892.5
CDS CCA 72 bp TGGCCAAATCCTCTTTCTGGCATTTGCACGCTTCCTTaGGGGGCAGGGCTGTCACCTTCTTCTCTTTCTCGA +
Preference number: 6 (lower is better)
Translates to: WPNPLSGICTLP*GAGLSPSSLSR
Trigger: TCGAGAAAGAGAAGAAGGTGACAGCCCTGCCCCCCAAGGAAGCGTGCAAATGCCAGAAAGAGGATTTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262429.9
ENST00000416219.6
CDS CCA 72 bp CTCCTGCAGAGCCTTGATGATTTTGAGCTTGTGCTTTaGGCTGGTCCTGAAGAACACGGACACCTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: LLQSLDDFELVL*AGPEEHGHLPH
Trigger: GTGGGGAAGGTGTCCGTGTTCTTCAGGACCAGCCCAAAGCACAAGCTCAAAATCATCAAGGCTCTGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CCA 72 bp CTCCTGCAGAGCCTTGATGATTTTGAGCTTGTGCTTTaGGCTGGTCCTGAAGAACACGGACACCTGGACACG +
Preference number: 6 (lower is better)
Translates to: LLQSLDDFELVL*AGPEEHGHLDT
Trigger: CGTGTCCAGGTGTCCGTGTTCTTCAGGACCAGCCCAAAGCACAAGCTCAAAATCATCAAGGCTCTGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567892.5
CDS CCA 72 bp GTCAGCTCTTCCAGAGATTTCTCCGACCTGTACTCCTaGCAGGAAGCACATCAGATGTGCTGGATGAAGGCG +
Preference number: 6 (lower is better)
Translates to: VSSSRDFSDLYS*QEAHQMCWMKA
Trigger: CGCCTTCATCCAGCACATCTGATGTGCTTCCTGCCAGGAGTACAGGTCGGAGAAATCTCTGGAAGAGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569207.5
CDS CAA 72 bp AGCCAGGCTGACCCCGATCGTGAACATACTCAGGAGTaGTTTCCCTTGCGACCAGCCAATGAGCATGATGAG +
Preference number: 6 (lower is better)
Translates to: SQADPDREHTQE*FPLRPANEHDE
Trigger: CTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGTCAGCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CAA 72 bp TCTGATGGCATCACATTGTCCGGTGTGTGTACATGTTaGCCTCTCCCAGATGTGAGCTGTGGCAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: SDGITLSGVCTC*PLPDVSCGRRA
Trigger: TGCCCTCCTGCCACAGCTCACATCTGGGAGAGGCAAACATGTACACACACCGGACAATGTGATGCCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CAA 72 bp TTGCCTCATGCACCCCACGCCTCTGATGGCATCACATaGTCCGGTGTGTGTACATGTTTGCCTCTCCCAGAT +
Preference number: 6 (lower is better)
Translates to: LPHAPHASDGIT*SGVCTCLPLPD
Trigger: ATCTGGGAGAGGCAAACATGTACACACACCGGACAATGTGATGCCATCAGAGGCGTGGGGTGCATGAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624933.1
CDS CAA 90 bp GCACGAAGCCCATCTGACGTTACAAGCTGGGTCACTGTCATTTCATaGGCAGTCAGAGTCCCCGTCTTGTCAGAACAGAGAACGCTGCAG +
Preference number: 6 (lower is better)
Translates to: ARSPSDVTSWVTVIS*AVRVPVLSEQRTLQ
Trigger: CTGCAGCGTTCTCTGTTCTGACAAGACGGGGACTCTGACTGCCAATGAAATGACAGTGACCCAGCTTGTAACGTCAGATGGGCTTCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS TCA 72 bp CCCTGGGAGGTGATGCCACTCCAGTTAAACCCAGAGTaGAGGTCATTTCCTACAAGGAAGGCTGAAGGATGG +
Preference number: 6 (lower is better)
Translates to: PWEVMPLQLNPE*RSFPTRKAEGW
Trigger: CCATCCTTCAGCCTTCCTTGTAGGAAATGACCTTCACTCTGGGTTTAACTGGAGTGGCATCACCTCCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566874.1
ENST00000624933.1
CDS TCA 72 bp GCTCCTCCAGTGAACCAAAAAGTCCCAGGGAGGCTCTaGCTTACCAGTTACATTCTGGAGGAACCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: APPVNQKVPGRL*LTSYILEEPAW
Trigger: CCAAGCTGGTTCCTCCAGAATGTAACTGGTAAGTCAGAGCCTCCCTGGGACTTTTTGGTTCACTGGAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS GCA 72 bp CCTGACTCCTGCAGAGCCTTGATGATTTTGAGCTTGTaGTTTGGGCTGGTCCTGAAGAACACGGACACCTTC +
Preference number: 6 (lower is better)
Translates to: PDSCRALMILSL*FGLVLKNTDTF
Trigger: GAAGGTGTCCGTGTTCTTCAGGACCAGCCCAAAGCACAAGCTCAAAATCATCAAGGCTCTGCAGGAGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS GCA 72 bp ACGACATCACCAGGAACCAGTTCTCGAGCAAGCAGGTaGTGGAGTTTTCCTTCTCTTAGGCTGGATGAAGGC +
Preference number: 6 (lower is better)
Translates to: TTSPGTSSRASR*WSFPSLRLDEG
Trigger: GCCTTCATCCAGCCTAAGAGAAGGAAAACTCCAGCACCTGCTTGCTCGAGAACTGGTTCCTGGTGATGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420010.6
CDS GCA 72 bp TTTAAGGAGTGTGTGACTCTCAGCTGGGGCTGGCAATaGTTTTGGCTGGTGAAGCTTGTCTTAGGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: FKECVTLSWGWQ*FWLVKLVLGVP
Trigger: GGGGACACCTAAGACAAGCTTCACCAGCCAAAAGCATTGCCAGCCCCAGCTGAGAGTCACACACTCCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564099.1
CDS CCA 72 bp TTGTGCTTTGGGCTGGTCCTGAAGAACACGGACACCTaGACACGGAGACGGGGAAGACGAAGAATCAGATTT +
Preference number: 6 (lower is better)
Translates to: LCFGLVLKNTDT*TRRRGRRRIRF
Trigger: AAATCTGATTCTTCGTCTTCCCCGTCTCCGTGTCCAGGTGTCCGTGTTCTTCAGGACCAGCCCAAAGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567892.5
CDS CAA 90 bp AGCCAGGCTGACCCCGATCGTGAACATACTCAGGAGTTGTTTCCCTaGCGACCAGCCAATGAGCATGATGAGACCGATTATGCCAAAGGA +
Preference number: 6 (lower is better)
Translates to: SQADPDREHTQELFP*RPANEHDETDYAKG
Trigger: TCCTTTGGCATAATCGGTCTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGTCAGCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS CAA 90 bp ACAAGCTGGGTCACTGTCATTTCATTGGCAGTCAGAGTCCCCGTCTaGTCAGAACAGAGAACGCTGCAGCAACCTAAAGTCTCCACGATG +
Preference number: 6 (lower is better)
Translates to: TSWVTVISLAVRVPV*SEQRTLQQPKVSTM
Trigger: CATCGTGGAGACTTTAGGTTGCTGCAGCGTTCTCTGTTCTGACAAGACGGGGACTCTGACTGCCAATGAAATGACAGTGACCCAGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS TCA 72 bp TGGACCCCAGGACGGAGTAGAGGAACATGTGGTTCCTaGGAAAGCCGATCTCAAATATCAGCTTGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: WTPGRSRGTCGS*ESRSQISAWSE
Trigger: CTCAGACCAAGCTGATATTTGAGATCGGCTTTCTCAGGAACCACATGTTCCTCTACTCCGTCCTGGGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
ENST00000567222.1
ENST00000567892.5
CDS TCA 72 bp ATGGCCGCCACAGCCAGGCTGGATCGAAAGGTCAAATaGGTCCCCTCTAACACATTTAAGGAGTGTGTGACT +
Preference number: 6 (lower is better)
Translates to: MAATARLDRKVK*VPSNTFKECVT
Trigger: AGTCACACACTCCTTAAATGTGTTAGAGGGGACTCATTTGACCTTTCGATCCAGCCTGGCTGTGGCGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564099.1
CDS TCA 72 bp TGGACCCCAGGACGGAGTAGAGGAACATGTGGTTCCTaGGAAAGCCGATCTCAAATATCAGCTTGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: WTPGRSRGTCGS*ESRSQISAWSA
Trigger: TGCAGACCAAGCTGATATTTGAGATCGGCTTTCTCAGGAACCACATGTTCCTCTACTCCGTCCTGGGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567629.1
CDS GCA 72 bp TTCCTGAGAAAGCCGATCTCAAATATCAGCTTGGTCTaGAGGGAGAAGGTCACACGGGGGATTGTGTGCTGT +
Preference number: 6 (lower is better)
Translates to: FLRKPISNISLV*REKVTRGIVCC
Trigger: ACAGCACACAATCCCCCGTGTGACCTTCTCCCTGCAGACCAAGCTGATATTTGAGATCGGCTTTCTCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567629.1
CDS CAA 72 bp CTCTTACCTGACCCCGATCGTGAACATACTCAGGAGTaGTTTCCCTTGCGACCAGCCAATGAGCATGATGAG +
Preference number: 6 (lower is better)
Translates to: LLPDPDREHTQE*FPLRPANEHDE
Trigger: CTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGTCAGGTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CAA 90 bp CTCTTACCTGACCCCGATCGTGAACATACTCAGGAGTTGTTTCCCTaGCGACCAGCCAATGAGCATGATGAGACCGATTATGCCAAAGGA +
Preference number: 6 (lower is better)
Translates to: LLPDPDREHTQELFP*RPANEHDETDYAKG
Trigger: TCCTTTGGCATAATCGGTCTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGTCAGGTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS CAA 90 bp GCCATAGCACTCTTACCTGACCCCGATCGTGAACATACTCAGGAGTaGTTTCCCTTGCGACCAGCCAATGAGCATGATGAGACCGATTAT +
Preference number: 6 (lower is better)
Translates to: AIALLPDPDREHTQE*FPLRPANEHDETDY
Trigger: ATAATCGGTCTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGTCAGGTAAGAGTGCTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563340.1
CDS GCA 72 bp ACCCCGATCGTGAACATACTCAGGAGTTGTTTCCCTTaGGACCAGCCAATGAGCATGATGAGACCGATTATG +
Preference number: 6 (lower is better)
Translates to: TPIVNILRSCFP*DQPMSMMRPIM
Trigger: CATAATCGGTCTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000563340.1
ENST00000565631.5
CDS CCA 72 bp GTCAGCTCTTCCAGAGATTTCTCCGACCTGTACTCCTaGCAGGAAGCACATCAGATGTGCTGTTTAAAGGTG +
Preference number: 6 (lower is better)
Translates to: VSSSRDFSDLYS*QEAHQMCCLKV
Trigger: CACCTTTAAACAGCACATCTGATGTGCTTCCTGCCAGGAGTACAGGTCGGAGAAATCTCTGGAAGAGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS CCA 72 bp AAGTCCCAGGGAGGCTCTGACTTACCAGTTACATTCTaGAGGAACCAGCTTGGTCAGCTCTTCCAGAGATTT +
Preference number: 6 (lower is better)
Translates to: KSQGGSDLPVTF*RNQLGQLFQRF
Trigger: AAATCTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAGAATGTAACTGGTAAGTCAGAGCCTCCCTGGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568160.1
CDS CAA 72 bp GACCCCGATCGTGAACATACTCAGGAGTTGTTTCCCTaGCGACCAGCCAATGAGCATGATGAGACCGATTAT +
Preference number: 6 (lower is better)
Translates to: DPDREHTQELFP*RPANEHDETDY
Trigger: ATAATCGGTCTCATCATGCTCATTGGCTGGTCGCAAGGGAAACAACTCCTGAGTATGTTCACGATCGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000563340.1
ENST00000565631.5
CDS CAA 72 bp CCATCTGACGTTACAAGCTGGGTCACTGTCATTTCATaGGCAGTCAGAGTCCCCGTCTTGTCAGAACAGAGA +
Preference number: 6 (lower is better)
Translates to: PSDVTSWVTVIS*AVRVPVLSEQR
Trigger: TCTCTGTTCTGACAAGACGGGGACTCTGACTGCCAATGAAATGACAGTGACCCAGCTTGTAACGTCAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS CAA 90 bp TGGAGTTTTCCTTCTCTTAGGCAGTTACATTCTGGAGGAACCAGCTaGGTCAGCTCTTCCAGAGATTTCTCCGACCTGTACTCCTGGATG +
Preference number: 6 (lower is better)
Translates to: WSFPSLRQLHSGGTS*VSSSRDFSDLYSWM
Trigger: CATCCAGGAGTACAGGTCGGAGAAATCTCTGGAAGAGCTGACCAAGCTGGTTCCTCCAGAATGTAACTGCCTAAGAGAAGGAAAACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000565546.5
ENST00000565631.5
ENST00000565927.1
CDS CCA 72 bp CATCTGACGTTACAAGCTGGGTCACTGTCATTTCATTaGCAGTCAGAGTCCCCGTCTTGTCAGAACAGAGAA +
Preference number: 6 (lower is better)
Translates to: HLTLQAGSLSFH*QSESPSCQNRE
Trigger: TTCTCTGTTCTGACAAGACGGGGACTCTGACTGCCAATGAAATGACAGTGACCCAGCTTGTAACGTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000564099.1
ENST00000565631.5
CDS TCA 72 bp CTGAGTGGCAAGCCCTTTATCTCTAGACATCAGGGATaGAACACAAACTCCGCCTCCATGAAACTGATGTTC +
Preference number: 6 (lower is better)
Translates to: LSGKPFISRHQG*NTNSASMKLMF
Trigger: GAACATCAGTTTCATGGAGGCGGAGTTTGTGTTTCATCCCTGATGTCTAGAGATAAAGGGCTTGCCACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567222.1
CDS CCA 72 bp TTAAAAAGGGAGCTACCAGATCCAGCAATTCCACTTTaGGGTATATACCCAAAGGAACTGCTAGTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: LKRELPDPAIPL*GIYPKELLVGL
Trigger: GAGCCCCACTAGCAGTTCCTTTGGGTATATACCCCAAAGTGGAATTGCTGGATCTGGTAGCTCCCTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS CAA 90 bp TTGTTGGCAACACAGCCCGCCTCCACTAACTTTCCCACTGAGACATaGGAAAATTCCTTAATGACTTCCTTGGATGGTAGAAGACACACA +
Preference number: 6 (lower is better)
Translates to: LLATQPASTNFPTET*ENSLMTSLDGRRHT
Trigger: TGTGTGTCTTCTACCATCCAAGGAAGTCATTAAGGAATTTTCCAATGTCTCAGTGGGAAAGTTAGTGGAGGCGGGCTGTGTTGCCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS GCA 72 bp ATGAGACCGATTATGCCAAAGGAGAAGAGTGTCAGTTaGTTTCCTAGCCTGTCCATGCTTTTCTGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: MRPIMPKEKSVS*FPSLSMLFCKG
Trigger: TCCTTTGCAGAAAAGCATGGACAGGCTAGGAAAGCAACTGACACTCTTCTCCTTTGGCATAATCGGTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000563340.1
ENST00000565631.5
CDS CAA 72 bp ACACAGCCCGCCTCCACTAACTTTCCCACTGAGACATaGGAAAATTCCTTAATGACTTCCTTGGATGGTAGA +
Preference number: 6 (lower is better)
Translates to: TQPASTNFPTET*ENSLMTSLDGR
Trigger: TCTACCATCCAAGGAAGTCATTAAGGAATTTTCCAATGTCTCAGTGGGAAAGTTAGTGGAGGCGGGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262429.9
ENST00000416219.6
ENST00000420010.6
ENST00000565631.5
CDS TCA 72 bp GCTGACACGTGCTACAACATGGATACACCTTTAAGTTaGACCTTGAGGATGAAGTTAAGTGAAATAAACCAG +
Preference number: 6 (lower is better)
Translates to: ADTCYNMDTPLS*TLRMKLSEINQ
Trigger: CTGGTTTATTTCACTTAACTTCATCCTCAAGGTTCAACTTAAAGGTGTATCCATGTTGTAGCACGTGTCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS TCA 72 bp AGGAGGAAACAACCCACCAATCTTTCAAGGGATGAATaGATGCATGAAACATGGTGTACACACACAATGAAA +
Preference number: 6 (lower is better)
Translates to: RRKQPTNLSRDE*MHETWCTHTMK
Trigger: TTTCATTGTGTGTGTACACCATGTTTCATGCATTCATTCATCCCTTGAAAGATTGGTGGGTTGTTTCCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565631.5
CDS TCA 72 bp ACATGGTGTACACACACAATGAAATACTATTTAGCCTaGGAACGAAAGAAAATGCTGACACGTGCTACAACA +
Preference number: 6 (lower is better)
Translates to: TWCTHTMKYYLA*ERKKMLTRATT
Trigger: TGTTGTAGCACGTGTCAGCATTTTCTTTCGTTCTCAGGCTAAATAGTATTTCATTGTGTGTGTACACCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565631.5