RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2C1 (Homo sapiens)

Ensembl gene IDs: ENSG00000017260

Ensembl transcript IDs: ENST00000328560.12, ENST00000359644.7, ENST00000422190.6, ENST00000428331.6, ENST00000504381.5, ENST00000504571.5, ENST00000504612.5, ENST00000504948.5, ENST00000505072.5, ENST00000505330.5, ENST00000507194.1, ENST00000507488.6, ENST00000508297.2, ENST00000508532.5, ENST00000508660.5, ENST00000509150.1, ENST00000509662.5, ENST00000510168.6, ENST00000510774.1, ENST00000513636.1, ENST00000513801.5, ENST00000514654.5, ENST00000515854.5, ENST00000533801.6

Found 1026 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGGGTTAAGTAGAATAAACTGCAGCCAGCTCCTTACACTCAACTaGCTCAGTAACAATGACTCAAAGAATAGATATTTTCCCTATCAA +
Preference number: 1 (lower is better)
Translates to: KGLSRINCSQLLTLN*LSNNDSKNRYFPYQ
Trigger: TTGATAGGGAAAATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCTGCAGTTTATTCTACTTAACCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR CCA 90 bp AGCAAAGAATCTTCCACATATACTCTGGTTCATAAACCATTTGTTTaGGTTTGGGGACTTTTTATTCTAAGTCCAGTAGCCTATACTTCC +
Preference number: 1 (lower is better)
Translates to: SKESSTYTLVHKPFV*VWGLFILSPVAYTS
Trigger: GGAAGTATAGGCTACTGGACTTAGAATAAAAAGTCCCCAAACCCAAACAAATGGTTTATGAACCAGAGTATATGTGGAAGATTCTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCACATCTTCTGTCAGTaGCAGTCCTGTCTCCAGATG +
Preference number: 2 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDHIFCQ*QSCLQM
Trigger: CATCTGGAGACAGGACTGCCACTGACAGAAGATGTG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
3UTR CAA 90 bp CTTTATTTAGGTAAGGAAGAGCTGCAGGAAGATGGTGCTAAGATGTaGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: LYLGKEELQEDGAKM*YAEFQRVKAQTRLG
Trigger: GCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACATCTTAGCACCATCTTCCTGCAGCTCTTCCTTACCTAAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR TCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACAGAGTTCCAAAGAGTaGAGGCGCAGACACGGCTGG +
Preference number: 2 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREQSSKE*RRRHGW
Trigger: CCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACAGAGTTCCAAAGAGTaGAGGCGCAGACACGGCTGG +
Preference number: 2 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILQSSKE*RRRHGW
Trigger: CCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCAGAGTTCCAAAGAGTaGAGGCGCAGACACGGCTGG +
Preference number: 2 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYQSSKE*RRRHGW
Trigger: CCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR CCA 90 bp ACAACAGATCCAGTATGCTTAGGCTCTCAGTCTGAAAAACCTTCTGAAGCGGAGAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 2 (lower is better)
Translates to: TTDPVCLGSQSEKPSEAENTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...CTCCGCTTCAGAAGGTTTTTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507194.1
3UTR-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACAAAGAAGCTTCAGATaGACACAGAGCAAGACCAGC +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEQRSFR*TQSKTS
Trigger: GCTGGTCTTGCTCTGTGTGCATCTGAAGCTTCTTTG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp GCCTTCAGAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTGAATTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 2 (lower is better)
Translates to: AFRATASFTPSPVMATTEFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...TTCAGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTCTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504571.5
3UTR-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAGGAAATACAGTAGCTaGAATATGGCACTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNERKYSS*NMALLG
Trigger: TCCCAGGAGTGCCATATTTCAGCTACTGTATTTCCT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAGGAAATACAGTAGCTaGAATATGGCACTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYRKYSS*NMALLG
Trigger: TCCCAGGAGTGCCATATTTCAGCTACTGTATTTCCT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAAAAGAACAGTGATCTaGCAGTGGTCACATCCTGTG +
Preference number: 2 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYKRTVI*QWSHPV
Trigger: CACAGGATGTGACCACTGTCAGATCACTGTTCTTTT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCTTGATAGCCCTGCATaGATTCTGCCAAACCAAAGA +
Preference number: 2 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLDSPA*ILPNQR
Trigger: TCTTTGGTTTGGCAGAATTCATGCAGGGCTATCAAG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACTTGATAGCCCTGCATaGATTCTGCCAAACCAAAGA +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELDSPA*ILPNQR
Trigger: TCTTTGGTTTGGCAGAATTCATGCAGGGCTATCAAG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGCCCTGCATGAATTCTaGCAAACCAAAGACATACCT +
Preference number: 2 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYALHEF*QTKDIP
Trigger: AGGTATGTCTTTGGTTTGGCAGAATTCATGCAGGGC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGCCCTGCATGAATTCTaGCAAACCAAAGACATACCT +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEALHEF*QTKDIP
Trigger: AGGTATGTCTTTGGTTTGGCAGAATTCATGCAGGGC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACAAAGAAGCTTCAGATaGACACAGAGCAAGACCAGC +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALQRSFR*TQSKTS
Trigger: GCTGGTCTTGCTCTGTGTGCATCTGAAGCTTCTTTG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 2 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACTTGCCCTTCTAAATaGTCCTCAGACTGCAATTCC +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTCPSK*SSDCNS
Trigger: GGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAGGAAATACAGTAGCTaGAATATGGCACTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALRKYSS*NMALLG
Trigger: TCCCAGGAGTGCCATATTTCAGCTACTGTATTTCCT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAATAGCACATGGTATCTaGGCTGCTTACATTACAAGA +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEIAHGI*AAYITR
Trigger: TCTTGTAATGTAAGCAGCTCAGATACCATGTGCTAT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGCCCTGCATGAATTCTaGCAAACCAAAGACATACCT +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALALHEF*QTKDIP
Trigger: AGGTATGTCTTTGGTTTGGCAGAATTCATGCAGGGC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGAAATATGGCACTCCTaGGAATCAACTTCTAAACCA +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEEIWHS*ESTSKP
Trigger: TGGTTTAGAAGTTGATTCCCAGGAGTGCCATATTTC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCACTTGCCCTTCTAAATaGTCCTCAGACTGCAATTCC +
Preference number: 2 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFTCPSK*SSDCNS
Trigger: GGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAATTTCATTTGGGACTaGCAGCAGGTTAAAGTCTTA +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNENFIWD*QQVKVL
Trigger: TAAGACTTTAACCTGCTGGCAGTCCCAAATGAAATT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTAGACTTCTTTAAGTaGAGAAGGTGGTTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELDFFK*RRWFRF
Trigger: AAACCTGAACCACCTTCTGCACTTAAAGAAGTCTAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTAGACTTCTTTAAGTaGAGAAGGTGGTTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLDFFK*RRWFRF
Trigger: AAACCTGAACCACCTTCTGCACTTAAAGAAGTCTAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTGCATAATTTCATTTaGGACTGCCAGCAGGTTAAA +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELHNFI*DCQQVK
Trigger: TTTAACCTGCTGGCAGTCCCAAATGAAATTATGCAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTGCATAATTTCATTTaGGACTGCCAGCAGGTTAAA +
Preference number: 2 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLHNFI*DCQQVK
Trigger: TTTAACCTGCTGGCAGTCCCAAATGAAATTATGCAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTTAAGTGCAGAAGGTaGTTCAGGTTTTGCCTTTTT +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEFKCRR*FRFCLF
Trigger: AAAAAGGCAAAACCTGAACCACCTTCTGCACTTAAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 2 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAATAGCACATGGTATCTaGGCTGCTTACATTACAAGA +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALIAHGI*AAYITR
Trigger: TCTTGTAATGTAAGCAGCTCAGATACCATGTGCTAT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATACATGGTATCTGAGCTaGTTACATTACAAGAAAAAG +
Preference number: 2 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYTWYLS*LHYKKK
Trigger: CTTTTTCTTGTAATGTAAGCAGCTCAGATACCATGT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGAAATATGGCACTCCTaGGAATCAACTTCTAAACCA +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALEIWHS*ESTSKP
Trigger: TGGTTTAGAAGTTGATTCCCAGGAGTGCCATATTTC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAAAAATGATAGCACATaGTATCTGAGCTGCTTACAT +
Preference number: 2 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYKNDST*YLSCLH
Trigger: ATGTAAGCAGCTCAGATACCATGTGCTATCATTTTT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAAAAATGATAGCACATaGTATCTGAGCTGCTTACAT +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEKNDST*YLSCLH
Trigger: ATGTAAGCAGCTCAGATACCATGTGCTATCATTTTT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACCATTTGTTTGGGTTTaGGGACTTTTTATTCTAAGT +
Preference number: 2 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEPFVWV*GLFILS
Trigger: ACTTAGAATAAAAAGTCCCCAAACCCAAACAAATGG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACATACTCAAAACAAATaGCCTATACCTCATCAAGCT +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALHTQNK*PIPHQA
Trigger: AGCTTGATGAGGTATAGGTCATTTGTTTTGAGTATG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAATTTCATTTGGGACTaGCAGCAGGTTAAAGTCTTA +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALNFIWD*QQVKVL
Trigger: TAAGACTTTAACCTGCTGGCAGTCCCAAATGAAATT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAATTTCATTTGGGACTaGCAGCAGGTTAAAGTCTTA +
Preference number: 2 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFNFIWD*QQVKVL
Trigger: TAAGACTTTAACCTGCTGGCAGTCCCAAATGAAATT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACATGGTATCTGAGCTaGTTACATTACAAGAAAAAG +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTWYLS*LHYKKK
Trigger: CTTTTTCTTGTAATGTAAGCAGCTCAGATACCATGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTTGCATAATTTCATTTaGGACTGCCAGCAGGTTAAA +
Preference number: 2 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLHNFI*DCQQVK
Trigger: TTTAACCTGCTGGCAGTCCCAAATGAAATTATGCAA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACCATTTGTTTGGGTTTaGGGACTTTTTATTCTAAGT +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALPFVWV*GLFILS
Trigger: ACTTAGAATAAAAAGTCCCCAAACCCAAACAAATGG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAATAAAAGCTAAGGAGTaGTTCATCCTGACAGATTAT +
Preference number: 2 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALIKAKE*FILTDY
Trigger: ATAATCTGTCAGGATGAACCACTCCTTAGCTTTTAT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR TCA 72 bp ATGGTGCTAAGATGTTGTATGCAGAGTTCCAAAGAGTaGAGGCGCAGACACGGCTGGGCACAAGACTGGACT +
Preference number: 3 (lower is better)
Translates to: MVLRCCMQSSKE*RRRHGWAQDWT
Trigger: AGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACATCTTAGCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
3UTR-3UTR CAA 90 bp ATTGTTGTGTCTCGAGGTGTAATCACATTGTCTCGTAGCTCACGCCAGAAGACAATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 3 (lower is better)
Translates to: IVVSRGVITLSRSSRQKTMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...TGTCTTCTGGCGTGAGCTACGAGACAATGTGATTACACCTCGAGACACAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507194.1
3UTR-3UTR CAA 90 bp CCAAAAGAAACAACAGATCCAGTATGCTTAGGCTCTCAGTCTGAAAAACCTTCTCGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 3 (lower is better)
Translates to: PKETTDPVCLGSQSEKPSRGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...AGAAGGTTTTTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGTTTCTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507194.1
3UTR-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATACCCTAGAACACCACTaGATAGCCCTGCATGAATTC +
Preference number: 3 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYTLEHH*IALHEF
Trigger: GAATTCATGCAGGGCTATCAAGTGGTGTTCTAGGGT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAACCCTAGAACACCACTaGATAGCCCTGCATGAATTC +
Preference number: 3 (lower is better)
Translates to: KLMALHTKSTYFPSMPNETLEHH*IALHEF
Trigger: GAATTCATGCAGGGCTATCAAGTGGTGTTCTAGGGT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGATGGTGCTAAGATGTaGTATGCAGAGTTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGDGAKM*YAEFQR
Trigger: TCTTTGGAACTCTGCATACAACATCTTAGCACCATC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGATGGTGCTAAGATGTaGTATGCAGAGTTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSDGAKM*YAEFQR
Trigger: TCTTTGGAACTCTGCATACAACATCTTAGCACCATC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATGGTTCATAAACCATTaGTTTGGGTTTGGGGACTTT +
Preference number: 3 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEWFINH*FGFGDF
Trigger: AAAGTCCCCAAACCCAAACAAATGGTTTATGAACCA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTGGTTCATAAACCATTaGTTTGGGTTTGGGGACTTT +
Preference number: 3 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYWFINH*FGFGDF
Trigger: AAAGTCCCCAAACCCAAACAAATGGTTTATGAACCA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR TCA 72 bp CACTGTTACCCTAGAACACCACTTGATAGCCCTGCATaGATTCTGCCAAACCAAAGACATACCTTTTTAAAA +
Preference number: 3 (lower is better)
Translates to: HCYPRTPLDSPA*ILPNQRHTFLK
Trigger: TTTTAAAAAGGTATGTCTTTGGTTTGGCAGAATTCATGCAGGGCTATCAAGTGGTGTTCTAGGGTAACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGATGGTGCTAAGATGTaGTATGCAGAGTTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYDGAKM*YAEFQR
Trigger: TCTTTGGAACTCTGCATACAACATCTTAGCACCATC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGTAAATTCCGATGGGTaGAATAAAGTTAGGTCATCA +
Preference number: 3 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGVNSDG*NKVRSS
Trigger: TGATGACCTAACTTTATTCAACCCATCGGAATTTAC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATACCATTTGTTTGGGTTaGGGGACTTTTTATTCTAAG +
Preference number: 3 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYTICLG*GTFYSK
Trigger: CTTAGAATAAAAAGTCCCCAAACCCAAACAAATGGT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR GCA 72 bp TTCATAGACACAGATTTAGGGTTTAGAGAATTCAAATaGAGACATGTTTATGGTCAGGTAGTAGACCAGTGG +
Preference number: 3 (lower is better)
Translates to: FIDTDLGFREFK*RHVYGQVVDQW
Trigger: CCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTCTCTAAACCCTAAATCTGTGTCTATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR CCA 72 bp TCTTCCACATATACTCTGGTTCATAAACCATTTGTTTaGGTTTGGGGACTTTTTATTCTAAGTCCAGTAGCC +
Preference number: 3 (lower is better)
Translates to: SSTYTLVHKPFV*VWGLFILSPVA
Trigger: GGCTACTGGACTTAGAATAAAAAGTCCCCAAACCCAAACAAATGGTTTATGAACCAGAGTATATGTGGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGTAAATTCCGATGGGTaGAATAAAGTTAGGTCATCA +
Preference number: 3 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSVNSDG*NKVRSS
Trigger: TGATGACCTAACTTTATTCAACCCATCGGAATTTAC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
3UTR-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATGGTTCATAAACCATTaGTTTGGGTTTGGGGACTTT +
Preference number: 3 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALWFINH*FGFGDF
Trigger: AAAGTCCCCAAACCCAAACAAATGGTTTATGAACCA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR CCA 72 bp GAAAAAGGAAATACAGTAGCTGAAATATGGCACTCCTaGGAATCAACTTCTAAACCAAATAGAATGCCTTTG +
Preference number: 3 (lower is better)
Translates to: EKGNTVAEIWHS*ESTSKPNRMPL
Trigger: CAAAGGCATTCTATTTGGTTTAGAAGTTGATTCCCAGGAGTGCCATATTTCAGCTACTGTATTTCCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACCATTTGTTTGGGTTaGGGGACTTTTTATTCTAAG +
Preference number: 3 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTICLG*GTFYSK
Trigger: CTTAGAATAAAAAGTCCCCAAACCCAAACAAATGGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCGGCTCCGCGAGGCCGTaGTGGTCTGCTCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHIGSARP*WSAPAS
Trigger: GGAGGCGGGAGCAGACCAGCACGGCCTCGCGGAGCC...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAGCCCTCCTCCAGGCTaGGGGGTCTCAGCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSPPPG*GVSAAG
Trigger: CCCCGCGGCTGAGACCCCGCAGCCTGGAGGAGGGCT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGAAGCCCTCCTCCAGGCTaGGGGGTCTCAGCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: RVPKSEGADTAGHKTGLRSPPPG*GVSAAG
Trigger: CCCCGCGGCTGAGACCCCGCAGCCTGGAGGAGGGCT...TCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAGCGCTGACGAGAGGCTaGGGAAGGAGTTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGALTRG*GRSSPP
Trigger: GGGCGGGGAACTCCTTCCTCAGCCTCTCGTCAGCGC...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328560.12
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACGGGAGAAGAGGAGCTaGTCGCGGGGCAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRREKRS*SRGSGA
Trigger: CGCACCGCTGCCCCGCGAGCAGCTCCTCTTCTCCCG...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAACCCGCCCCGTCGTGTaGCCGCAACGTCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPTRPVV*PQRPQL
Trigger: GAGCTGGGGACGTTGCGGGCACACGACGGGGCGGGT...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328560.12
CDS-3UTR TCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDNSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGGGAGAGAAGAGGAGGTaGGGGGACCCGTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: LDTAHIFCQWQSCLQMGMGEKRR*GDPSRS
Trigger: GGACCGTGACGGGTCCCCTCACCTCCTCTTCTCTCC...CATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533801.6
CDS-3UTR TCA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHIELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAAACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTNSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTT...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCCAAAGCAAGAACTCTaGGTCCCGCTGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDPKQEL*VPLSPC
Trigger: GCATGGGCTCAGCGGGACTCAGAGTTCTTGCTTTGG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAGAGTTCCAAAGAGTaGAGGCGCAGACACGGCTGG +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGQSSKE*RRRHGW
Trigger: CCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: VPKSEGADTAGHKTGLRHVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...GTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCACCAAAGCAAGAACTCTaGGTCCCGCTGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: ADTAGHKTGLRHSSHLLSPKQEL*VPLSPC
Trigger: GCATGGGCTCAGCGGGACTCAGAGTTCTTGCTTTGG...TGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGATCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCACAGAGTTCCAAAGAGTaGAGGCGCAGACACGGCTGG +
Preference number: 4 (lower is better)
Translates to: ADTAGHKTGLRHSSHLLSQSSKE*RRRHGW
Trigger: CCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTG...TGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: PKSEGADTAGHKTGLRHSISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...GCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGRNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDRNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGATGTATCTCAACCAGCTaGTGTCCACTCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGCISTS*CPLLSQ
Trigger: CTGGGAGAGGAGTGGACAGCAGCTGGTTGAGATACA...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTGTATCTCAACCAGCTaGTGTCCACTCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDCISTS*CPLLSQ
Trigger: CTGGGAGAGGAGTGGACAGCAGCTGGTTGAGATACA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAAAGAGGGTCCTTGTCTaGACCTCCTTGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGKRVLV*TSLSAT
Trigger: GGTTGCTGACAAGGAGGTGCAGACAAGGACCCTCTT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACGGGAGAAGAGGAGCTaGTCGCGGGGCAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQREKRS*SRGSGA
Trigger: CGCACCGCTGCCCCGCGAGCAGCTCCTCTTCTCCCG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504948.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: PKSEGADTAGHKTGLRHSSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...GCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCCTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHILQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHITSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp AGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: RVKAQTRLGTRLDLDTAHTSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...GTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTTTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: AQTRLGTRLDLDTAHIFCLVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...ACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDLVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGTSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: LDTAHIFCQWQSCLQMGMSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...CATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTCACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EQLHHLLHLLSWLQLNRSHSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTG...AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTGTATCTCAACCAGCTaGTGTCCACTCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTCISTS*CPLLSQ
Trigger: CTGGGAGAGGAGTGGACAGCAGCTGGTTGAGATACA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCCCAGAGCCAGACATaGTTCTGGATCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSQSQT*FWIFSL
Trigger: CAGGGAAAAGATCCAGAAGCATGTCTGGCTCTGGGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422190.6
ENST00000507488.6
ENST00000513801.5
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACGGGAGAAGAGGAGCTaGTCGCGGGGCAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEREKRS*SRGSGA
Trigger: CGCACCGCTGCCCCGCGAGCAGCTCCTCTTCTCCCG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504948.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGLQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDLQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCCTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: PKSEGADTAGHKTGLRHSLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...GCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGTSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDTSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAGTCCTGTCTCCAGATaGGGATGTATCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSPVSR*GCISTS
Trigger: GCTGGTTGAGATACATCCCCATCTGGAGACAGGACT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACAGTCCTGTCTCCAGATaGGGATGTATCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: EFQRVKAQTRLGTRLDLDSPVSR*GCISTS
Trigger: GCTGGTTGAGATACATCCCCATCTGGAGACAGGACT...GTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCCAGACAGCCAAGTATaGACACTGTCTAGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTPDSQV*TLSRSV
Trigger: GACGCTTCTAGACAGTGTTCATACTTGGCTGTCTGG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGGAGAGAAGAGGAGGTaGGGGGACCCGTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQGEKRR*GDPSRS
Trigger: GGACCGTGACGGGTCCCCTCACCTCCTCTTCTCTCC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCATTTTCCATCGAAACTaGACTCGGGTTGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHIIFHRN*TRVDGY
Trigger: GTAGCCATCAACCCGAGTGCAGTTTCGATGGAAAAT...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSRASV*SNFPSR
Trigger: GCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCAGAGGGGTTTTTGGTaGCTCTTCTGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDQRGFW*LFCLHH
Trigger: ATGATGCAAGCAGAAGAGGCACCAAAAACCCCTCTG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGATTCCTAAGAGGTCCATaGTCTTCTGCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGFLRGP*SSAEGF
Trigger: AAACCCCTCTGCAGAAGAGCATGGACCTCTTAGGAA...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHIVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp TTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGCGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: LDTAHIFCQWQSCLQMGMRNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...CATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGAGCCAGACCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTEPDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGGTCTGGCTC...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGAGCCAGACCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTEPDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGGTCTGGCTC...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATGCGAGGCGGGAGCCTaGTCCCGGCGTGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQCEAGA*SRREKK
Trigger: CTTCTTCTCACGCCGGGAGCAGGCTCCCGCCTCGCA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504948.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAGCCCTCCTCCAGGCTaGGGGGTCTCAGCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALSPPPG*GVSAAG
Trigger: CCCCGCGGCTGAGACCCCGCAGCCTGGAGGAGGGCT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504948.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTLQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTTSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCCAAGGCTCTGAGCTaGGGGTCCATCCATAATAAT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSKALS*GSIHNN
Trigger: ATTATTATGGATGGACCCCCAGCTCAGAGCCTTGGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTAGTCCTGTCTCCAGATaGGGATGTATCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSPVSR*GCISTS
Trigger: GCTGGTTGAGATACATCCCCATCTGGAGACAGGACT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCACATCTTCTGTCAGTaGCAGTCCTGTCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTHIFCQ*QSCLQM
Trigger: CATCTGGAGACAGGACTGCCACTGACAGAAGATGTG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRLVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRTSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GTGAAGGTCATTGTTGTGTCTCGAGGTGTAATCACATTGTCTCGTAGCTCACGCTCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: VKVIVVSRGVITLSRSSRSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...GCGTGAGCTACGAGACAATGTGATTACACCTCGAGACACAACAATGACCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR TCA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCGAGGAGGTTTACGAATaGCATCTTTATCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHIEEVYE*HLYPLV
Trigger: AACCAGTGGATAAAGATGTCATTCGTAAACCTCCTC...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSRASV*SNFPSR
Trigger: GCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTAAGATCTCCATTAGTTaGAGCTGGCTGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTKISIS*SWLRSC
Trigger: ACAGCTCCTCAGCCAGCTGCAACTAATGGAGATCTT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAATGACAACACCCTTTaGTTTGCCACATCTGACCAG +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDNDNTL*FATSDQ
Trigger: CTGGTCAGATGTGGCAAAGCAAAGGGTGTTGTCATT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCAGAGGGGTTTTTGGTaGCTCTTCTGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTQRGFW*LFCLHH
Trigger: ATGATGCAAGCAGAAGAGGCACCAAAAACCCCTCTG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTTCCTAAGAGGTCCATaGTCTTCTGCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTFLRGP*SSAEGF
Trigger: AAACCCCTCTGCAGAAGAGCATGGACCTCTTAGGAA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTTCCTAAGAGGTCCATaGTCTTCTGCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GHKTGLRHSSHLLSVAVLFLRGP*SSAEGF
Trigger: AAACCCCTCTGCAGAAGAGCATGGACCTCTTAGGAA...CAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp CCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCACCTTCAGGAATTGCTaGTACAGCCAAACTTACACT +
Preference number: 4 (lower is better)
Translates to: PKSEGADTAGHKTGLRHSTFRNC*YSQTYT
Trigger: AGTGTAAGTTTGGCTGTAGCAGCAATTCCTGAAGGT...GCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CATTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: HLLHLLSWLQLNRSSVATVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...AGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTGTCTGCTGCCTCTTTaGAAACATCTGTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDCLLPL*KHLYQS
Trigger: AGACTGGTACAGATGTTTGCAAAGAGGCAGCAGACA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCATGTATCTCAACCAGCTaGTGTCCACTCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPCISTS*CPLLSQ
Trigger: CTGGGAGAGGAGTGGACAGCAGCTGGTTGAGATACA...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATGCGAGGCGGGAGCCTaGTCCCGGCGTGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNECEAGA*SRREKK
Trigger: CTTCTTCTCACGCCGGGAGCAGGCTCCCGCCTCGCA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504948.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACGGGAGAAGAGGAGCTaGTCGCGGGGCAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALREKRS*SRGSGA
Trigger: CGCACCGCTGCCCCGCGAGCAGCTCCTCTTCTCCCG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504948.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACGGGAGAAGAGGAGCTaGTCGCGGGGCAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILREKRS*SRGSGA
Trigger: CGCACCGCTGCCCCGCGAGCAGCTCCTCTTCTCCCG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAGCCCTCCTCCAGGCTaGGGGGTCTCAGCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSPPPG*GVSAAG
Trigger: CCCCGCGGCTGAGACCCCGCAGCCTGGAGGAGGGCT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504948.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGGCTCCGCGAGGCCGTaGTGGTCTGCTCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFGSARP*WSAPAS
Trigger: GGAGGCGGGAGCAGACCAGCACGGCCTCGCGGAGCC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508532.5
CDS-3UTR CCA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCCACACAATGGCATTCTaGTGGCACAAGTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHIHTMAF*WHKFTQ
Trigger: TTGAGTAAACTTGTGCCACCAGAATGCCATTGTGTG...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp AGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGCCTTCACGCACACAATaGCATTCTGGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: RLDLDTAHIFCQWQSCLQPSRTQ*HSGGTS
Trigger: ACTTGTGCCACCAGAATGCCATTGTGTGCGTGAAGG...CTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACCTTCACGCACACAATaGCATTCTGGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRPSRTQ*HSGGTS
Trigger: ACTTGTGCCACCAGAATGCCATTGTGTGCGTGAAGG...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRANCIT*NQVSGK
Trigger: CTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGC...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: LDTAHIFCQWQSCLQMGMSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...CATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRLQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDNTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: EFQRVKAQTRLGTRLDLDNTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...GTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAAGTCCTGTCTCCAGATaGGGATGTATCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRSPVSR*GCISTS
Trigger: GCTGGTTGAGATACATCCCCATCTGGAGACAGGACT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACACATCTTCTGTCAGTaGCAGTCCTGTCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRHIFCQ*QSCLQM
Trigger: CATCTGGAGACAGGACTGCCACTGACAGAAGATGTG...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATCCGCGAGGCCGTGCTaGTCTGCTCCCGCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALSARPC*SAPASD
Trigger: GTCGGAGGCGGGAGCAGACCAGCACGGCCTCGCGGA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508532.5
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCCGCGAGGCCGTGCTaGTCTGCTCCCGCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILSARPC*SAPASD
Trigger: GTCGGAGGCGGGAGCAGACCAGCACGGCCTCGCGGA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533801.6
CDS-3UTR TCA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTCTGAACGATATTCCTaGACAAAGGCAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHISERYS*TKATVT
Trigger: TGTTACAGTTGCCTTTGTTCAGGAATATCGTTCAGA...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPTSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQNSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACCTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: VPKSEGADTAGHKTGLRHLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...GTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAAACAACGATAAGTATTaGCACAGTGATACTGACGGC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGNNDKY*HSDTDG
Trigger: GCCGTCAGTATCACTGTGGCAATACTTATCGTTGTT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAAAGATCTCCATTAGTTaGAGCTGGCTGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRKISIS*SWLRSC
Trigger: ACAGCTCCTCAGCCAGCTGCAACTAATGGAGATCTT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATTCCTAAGAGGTCCATaGTCTTCTGCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRFLRGP*SSAEGF
Trigger: AAACCCCTCTGCAGAAGAGCATGGACCTCTTAGGAA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAACAGCCATCCACTTTTaGTCAGAGCTAAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGTAIHF*SELKGY
Trigger: ATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACACAGCCATCCACTTTTaGTCAGAGCTAAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDTAIHF*SELKGY
Trigger: ATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAACAACAGATCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGTTDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
CDS-3UTR CCA 90 bp CCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCACAATGGCATTCTGGTaGCACAAGTTTACTCAATTC +
Preference number: 4 (lower is better)
Translates to: PKSEGADTAGHKTGLRHSTMAFW*HKFTQF
Trigger: GAATTGAGTAAACTTGTGCCACCAGAATGCCATTGT...GCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACACACAATGGCATTCTaGTGGCACAAGTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGHTMAF*WHKFTQ
Trigger: TTGAGTAAACTTGTGCCACCAGAATGCCATTGTGTG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCACCTTCACGCACACAATaGCATTCTGGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPPSRTQ*HSGGTS
Trigger: ACTTGTGCCACCAGAATGCCATTGTGTGCGTGAAGG...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGATCTCACCTGTCAAGCTaGACTCATCAATGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGSHLSS*THQWKD
Trigger: ATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGA...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCTCACCTGTCAAGCTaGACTCATCAATGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSHLSS*THQWKD
Trigger: ATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: VPKSEGADTAGHKTGLRHAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...GTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACACTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGCTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: GHKTGLRHSSHLLSVAVLLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...CAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp GACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATCTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: DTAHIFCQWQSCLQMGMYLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...ATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATCCAAGGCTCTGAGCTaGGGGTCCATCCATAATAAT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRSKALS*GSIHNN
Trigger: ATTATTATGGATGGACCCCCAGCTCAGAGCCTTGGA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GHKTGLRHSSHLLSVAVLDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...CAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACATGCAGACATGTTTATaGTCAGGTAGTAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDMQTCL*SGSRPV
Trigger: CACTGGTCTACTACCTGACCATAAACATGTCTGCAT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACGAACTAACATGCTTCTaGATCTTTTCCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDELTCF*IFSLLL
Trigger: AAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTC...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359644.7
ENST00000504381.5
ENST00000504612.5
CDS-3UTR TCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTGCTTGCAACTTCACTaGCTGGTAATTCACTTGCTT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTCLQLH*LVIHLL
Trigger: AAGCAAGTGAATTACCAGTCAGTGAAGTTGCAAGCA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTGTTTAGACCATTCTaGAGATCAGCTTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDLFRPF*RSAWRM
Trigger: CATTCTCCAAGCTGATCTTCAGAATGGTCTAAACAA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACTTGTTTAGACCATTCTaGAGATCAGCTTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: EFQRVKAQTRLGTRLDLDLFRPF*RSAWRM
Trigger: CATTCTCCAAGCTGATCTTCAGAATGGTCTAAACAA...GTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCTGAACGATATTCCTaGACAAAGGCAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSERYS*TKATVT
Trigger: TGTTACAGTTGCCTTTGTTCAGGAATATCGTTCAGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: EFQRVKAQTRLGTRLDLDSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...GTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: VPKSEGADTAGHKTGLRHGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...GTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNENSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYNSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACCAAAGCAAGAACTCTaGGTCCCGCTGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQPKQEL*VPLSPC
Trigger: GCATGGGCTCAGCGGGACTCAGAGTTCTTGCTTTGG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGAGAGGAGGTTTACGAATaGCATCTTTATCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: RVPKSEGADTAGHKTGLREEVYE*HLYPLV
Trigger: AACCAGTGGATAAAGATGTCATTCGTAAACCTCCTC...TCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGGAGAGAAGAGGAGGTaGGGGGACCCGTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALGEKRR*GDPSRS
Trigger: GGACCGTGACGGGTCCCCTCACCTCCTCTTCTCTCC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTAACAACGATAAGTATTaGCACAGTGATACTGACGGC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTNNDKY*HSDTDG
Trigger: GCCGTCAGTATCACTGTGGCAATACTTATCGTTGTT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCATCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPSRASV*SNFPSR
Trigger: GCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGA...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCACAGAGGGGTTTTTGGTaGCTCTTCTGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPQRGFW*LFCLHH
Trigger: ATGATGCAAGCAGAAGAGGCACCAAAAACCCCTCTG...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTACCTTCAGGAATTGCTaGTACAGCCAAACTTACACT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTTFRNC*YSQTYT
Trigger: AGTGTAAGTTTGGCTGTAGCAGCAATTCCTGAAGGT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTACAGCCATCCACTTTTaGTCAGAGCTAAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTTAIHF*SELKGY
Trigger: ATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATGTCTGCTGCCTCTTTaGAAACATCTGTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRCLLPL*KHLYQS
Trigger: AGACTGGTACAGATGTTTGCAAAGAGGCAGCAGACA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCTGGATCTTTTCCCTaGTCCTTTCAACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSGSFP*SFQPSL
Trigger: TAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAGCAAATGTTCTCCTTaGTGTTTCCTCTTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSKCSP*CFLFWV
Trigger: TACCCAAAAGAGGAAACAGCAAGGAGAACATTTGCT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTGCGAGGCGGGAGCCTaGTCCCGGCGTGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYCEAGA*SRREKK
Trigger: CTTCTTCTCACGCCGGGAGCAGGCTCCCGCCTCGCA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGCGAGGCGGGAGCCTaGTCCCGGCGTGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILCEAGA*SRREKK
Trigger: CTTCTTCTCACGCCGGGAGCAGGCTCCCGCCTCGCA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCACACAATGGCATTCTaGTGGCACAAGTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTHTMAF*WHKFTQ
Trigger: TTGAGTAAACTTGTGCCACCAGAATGCCATTGTGTG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTCTCACCTGTCAAGCTaGACTCATCAATGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSHLSS*THQWKD
Trigger: ATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTTTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: AQTRLGTRLDLDTAHIFCFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...ACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp AGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLDLDTAHIFCQWQSCLQDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...CTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRNTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCATCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: ADTAGHKTGLRHSSHLLSSQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...TGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCAGGTAGTAGACCAGTaGAAAAGATCTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDQVVDQ*KRSYFR
Trigger: CCTGAAATAAGATCTTTTCCACTGGTCTACTACCTG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTATGCAGACATGTTTATaGTCAGGTAGTAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTMQTCL*SGSRPV
Trigger: CACTGGTCTACTACCTGACCATAAACATGTCTGCAT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGAACTAACATGCTTCTaGATCTTTTCCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTELTCF*IFSLLL
Trigger: AAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTC...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359644.7
ENST00000504381.5
ENST00000504612.5
CDS-3UTR TCA 90 bp GCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCAACGGCATCATCAAACTaGTGCATTAAAACACTGATG +
Preference number: 4 (lower is better)
Translates to: ADTAGHKTGLRHSSHLLSTASSN*CIKTLM
Trigger: CATCAGTGTTTTAATGCATCAGTTTGATGATGCCGT...TGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAACGGCATCATCAAACTaGTGCATTAAAACACTGATG +
Preference number: 4 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTTASSN*CIKTLM
Trigger: CATCAGTGTTTTAATGCATCAGTTTGATGATGCCGT...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSNSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRENSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCCAAAGCAAGAACTCTaGGTCCCGCTGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYPKQEL*VPLSPC
Trigger: GCATGGGCTCAGCGGGACTCAGAGTTCTTGCTTTGG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAAACTGCAGTCTCCTGTaGATCTCCAGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTNCSLL*ISSNHF
Trigger: AAAATGATTACTGGAGATTCACAGGAGACTGCAGTT...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTAACTGCAGTCTCCTGTaGATCTCCAGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTNCSLL*ISSNHF
Trigger: AAAATGATTACTGGAGATTCACAGGAGACTGCAGTT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp GCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCAAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ADTAGHKTGLRHSSHLLSKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...TGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGCTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: LDTAHIFCQWQSCLQMGMLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...CATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACAGAGTTCCAAAGAGTaGAGGCGCAGACACGGCTGG +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGQSSKE*RRRHGW
Trigger: CCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGAACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: RVPKSEGADTAGHKTGLRTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...TCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: GHKTGLRHSSHLLSVAVLTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...CAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp CTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAATACAAGATACACTCTaGGTCCCGCTGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: LHHLLHLLSWLQLNRSSVIQDTL*VPLSPC
Trigger: GCATGGGCTCAGCGGGACTCAGAGTGTATCTTGTAT...TACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAAATGTTACTTCTCGATaGAAGATCTCCATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGNVTSR*KISISC
Trigger: GCAACTAATGGAGATCTTGCATCGAGAAGTAACATT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAATGTTACTTCTCGATaGAAGATCTCCATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDNVTSR*KISISC
Trigger: GCAACTAATGGAGATCTTGCATCGAGAAGTAACATT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAACCTTCAGGAATTGCTaGTACAGCCAAACTTACACT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRTFRNC*YSQTYT
Trigger: AGTGTAAGTTTGGCTGTAGCAGCAATTCCTGAAGGT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATCCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: DTAHIFCQWQSCLQMGMYPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...ATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAACAGCCATCCACTTTTaGTCAGAGCTAAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRTAIHF*SELKGY
Trigger: ATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCATGTCTGCTGCCTCTTTaGAAACATCTGTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPCLLPL*KHLYQS
Trigger: AGACTGGTACAGATGTTTGCAAAGAGGCAGCAGACA...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGATTGATCCACAAAATCTaGATGGCATTGAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGLIHKI*MALRGL
Trigger: TAATCCTCTCAATGCCATGCAGATTTTGTGGATCAA...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAGATGTCGAACTAACATaGTTCTGGATCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRDVELT*FWIFSL
Trigger: CAGGGAAAAGATCCAGAAGCATGTTAGTTCGACATC...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359644.7
ENST00000504381.5
ENST00000504612.5
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTAGCAAATGTTCTCCTTaGTGTTTCCTCTTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSKCSP*CFLFWV
Trigger: TACCCAAAAGAGGAAACAGCAAGGAGAACATTTGCT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTGCGAGGCGGGAGCCTaGTCCCGGCGTGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFCEAGA*SRREKK
Trigger: CTTCTTCTCACGCCGGGAGCAGGCTCCCGCCTCGCA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504948.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTACAATGGCATTCTGGTaGCACAAGTTTACTCAATTC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTTMAFW*HKFTQF
Trigger: GAATTGAGTAAACTTGTGCCACCAGAATGCCATTGT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATCTCACCTGTCAAGCTaGACTCATCAATGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRSHLSS*THQWKD
Trigger: ATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: DTAHIFCQWQSCLQMGMYVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...ATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTCTCCTGAGACTGACTaGGAAGTTTTGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSPETD*EVLEYN
Trigger: ATTGTATTCCAAAACTTCCCAGTCAGTCTCAGGAGA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTCTGCAGCCTTCAGAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTCTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: MSAAFRATASFTPSPVMALHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...AGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTCTGAAGGCTGCAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CCA 90 bp GACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATATGCAGACATGTTTATaGTCAGGTAGTAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: DTAHIFCQWQSCLQMGMYMQTCL*SGSRPV
Trigger: CACTGGTCTACTACCTGACCATAAACATGTCTGCAT...ATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAATGCAGACATGTTTATaGTCAGGTAGTAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRMQTCL*SGSRPV
Trigger: CACTGGTCTACTACCTGACCATAAACATGTCTGCAT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACATAAGAGAATCTAGATaGAGGCAACAGACTATCCAT +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDIRESR*RQQTIH
Trigger: ATGGATAGTCTGTTGCCTCCATCTAGATTCTCTTAT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATGTTCTTCGGCTCTTTaGTTTCTCAGCGTCGATAAA +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRCSSAL*FLSVDK
Trigger: TTTATCGACGCTGAGAAACCAAAGAGCCGAAGAACA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR TCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAACGGCATCATCAAACTaGTGCATTAAAACACTGATG +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRTASSN*CIKTLM
Trigger: CATCAGTGTTTTAATGCATCAGTTTGATGATGCCGT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp ACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAATAACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: TPSPVMATTEPFFCSDLITSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...TATTAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATAACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYNSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAAACTCTGAGTCCCGCTaGGCCCATGCGTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILNSESR*AHACLL
Trigger: GAGAAGGCACGCATGGGCTCAGCGGGACTCAGAGTT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCCAAAGCAAGAACTCTaGGTCCCGCTGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSPKQEL*VPLSPC
Trigger: GCATGGGCTCAGCGGGACTCAGAGTTCTTGCTTTGG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAAACTGCAGTCTCCTGTaGATCTCCAGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRNCSLL*ISSNHF
Trigger: AAAATGATTACTGGAGATTCACAGGAGACTGCAGTT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGAATTTGTGAAAGCTGCTaGACATCCATTGCATCTATT +
Preference number: 4 (lower is better)
Translates to: RVPKSEGADTAGHKTGLRICESC*TSIASI
Trigger: AATAGATGCAATGGATGTTCAGCAGCTTTCACAAAT...TCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: RLDLDTAHIFCQWQSCLQKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...CTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCAGAGTTCCAAAGAGTaGAGGCGCAGACACGGCTGG +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSQSSKE*RRRHGW
Trigger: CCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAAATGTTACTTCTCGATaGAAGATCTCCATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTNVTSR*KISISC
Trigger: GCAACTAATGGAGATCTTGCATCGAGAAGTAACATT...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR GCA 90 bp TTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: FTPSPVMATTEPFFCSDLISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...TAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQRNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTTGATCCACAAAATCTaGATGGCATTGAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTLIHKI*MALRGL
Trigger: TAATCCTCTCAATGCCATGCAGATTTTGTGGATCAA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATCTGGATCTTTTCCCTaGTCCTTTCAACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRSGSFP*SFQPSL
Trigger: TAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
CDS-3UTR CCA 90 bp AGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGTCTCCTGAGACTGACTaGGAAGTTTTGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: RLDLDTAHIFCQWQSCLQSPETD*EVLEYN
Trigger: ATTGTATTCCAAAACTTCCCAGTCAGTCTCAGGAGA...CTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATTTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: DTAHIFCQWQSCLQMGMYFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...ATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ACAACAGATCCAGTATGCTTAGGCTCTCAGTCTGAAAAACCTTCTGAAGCGGAGTCCAAGGCTCTGAGCTaGGGGTCCATCCATAATAAT +
Preference number: 4 (lower is better)
Translates to: TTDPVCLGSQSEKPSEAESKALS*GSIHNN
Trigger: ATTATTATGGATGGACCCCCAGCTCAGAGCCTTGGA...CTCCGCTTCAGAAGGTTTTTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR CCA 90 bp GTGAAGGTCATTGTTGTGTCTCGAGGTGTAATCACATTGTCTCGTAGCTCACGCAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: VKVIVVSRGVITLSRSSRNTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...GCGTGAGCTACGAGACAATGTGATTACACCTCGAGACACAACAATGACCTTCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQTSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACCAAAGCAAGAACTCTaGGTCCCGCTGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILPKQEL*VPLSPC
Trigger: GCATGGGCTCAGCGGGACTCAGAGTTCTTGCTTTGG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCCAAAGCAAGAACTCTaGGTCCCGCTGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYPKQEL*VPLSPC
Trigger: GCATGGGCTCAGCGGGACTCAGAGTTCTTGCTTTGG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATATTTGTGAAAGCTGCTaGACATCCATTGCATCTATT +
Preference number: 4 (lower is better)
Translates to: DTAHIFCQWQSCLQMGMYICESC*TSIASI
Trigger: AATAGATGCAATGGATGTTCAGCAGCTTTCACAAAT...ATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR TCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRESTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GTGAAGGTCATTGTTGTGTCTCGAGGTGTAATCACATTGTCTCGTAGCTCACGCGAGGAGGTTTACGAATaGCATCTTTATCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: VKVIVVSRGVITLSRSSREEVYE*HLYPLV
Trigger: AACCAGTGGATAAAGATGTCATTCGTAAACCTCCTC...GCGTGAGCTACGAGACAATGTGATTACACCTCGAGACACAACAATGACCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR GCA 90 bp GCAGCCTTCAGAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTCCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: AAFRATASFTPSPVMATTPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...AGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTCTGAAGGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGTCCCGCTGAGCCCATaGGTGCCTTCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYVPLSP*VPSLVG
Trigger: ACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGAC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGRNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYRNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNERNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATTGATCCACAAAATCTaGATGGCATTGAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRLIHKI*MALRGL
Trigger: TAATCCTCTCAATGCCATGCAGATTTTGTGGATCAA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATGTATCTCAACCAGCTaGTGTCCACTCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGCISTS*CPLLSQ
Trigger: CTGGGAGAGGAGTGGACAGCAGCTGGTTGAGATACA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAAGAGGGTCCTTGTCTaGACCTCCTTGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEKRVLV*TSLSAT
Trigger: GGTTGCTGACAAGGAGGTGCAGACAAGGACCCTCTT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505330.5
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACCTTCACGCACACAATaGCATTCTGGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQPSRTQ*HSGGTS
Trigger: ACTTGTGCCACCAGAATGCCATTGTGTGCGTGAAGG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQANCIT*NQVSGK
Trigger: CTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp ATGTCTGCAGCCTTCAGAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: MSAAFRATASFTPSPVMAAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...AGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTCTGAAGGCTGCAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CCA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGLVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNETSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYTSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCCAAAGCAAGAACTCTaGGTCCCGCTGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFPKQEL*VPLSPC
Trigger: GCATGGGCTCAGCGGGACTCAGAGTTCTTGCTTTGG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCCAGACAGCCAAGTATaGACACTGTCTAGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYPDSQV*TLSRSV
Trigger: GACGCTTCTAGACAGTGTTCATACTTGGCTGTCTGG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505330.5
CDS-3UTR TCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACCAGACAGCCAAGTATaGACACTGTCTAGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGPDSQV*TLSRSV
Trigger: GACGCTTCTAGACAGTGTTCATACTTGGCTGTCTGG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQSRASV*SNFPSR
Trigger: GCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAAGATCTCCATTAGTTaGAGCTGGCTGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQKISIS*SWLRSC
Trigger: ACAGCTCCTCAGCCAGCTGCAACTAATGGAGATCTT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACAGAGGGGTTTTTGGTaGCTCTTCTGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQQRGFW*LFCLHH
Trigger: ATGATGCAAGCAGAAGAGGCACCAAAAACCCCTCTG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSRNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACCTTCACGCACACAATaGCATTCTGGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGPSRTQ*HSGGTS
Trigger: ACTTGTGCCACCAGAATGCCATTGTGTGCGTGAAGG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGANCIT*NQVSGK
Trigger: CTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGLQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYTSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNETSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp GACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: DTAHIFCQWQSCLQMGMYILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...ATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATCCAAGGCTCTGAGCTaGGGGTCCATCCATAATAAT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQSKALS*GSIHNN
Trigger: ATTATTATGGATGGACCCCCAGCTCAGAGCCTTGGA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
3UTR CAA 72 bp GCGTTAATTATGGACACTGTTACCCTAGAACACCACTaGATAGCCCTGCATGAATTCTGCCAAACCAAAGAC +
Preference number: 4 (lower is better)
Translates to: ALIMDTVTLEHH*IALHEFCQTKD
Trigger: GTCTTTGGTTTGGCAGAATTCATGCAGGGCTATCAAGTGGTGTTCTAGGGTAACAGTGTCCATAATTAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRELVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSLVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGAGCTAGCGTCACTGTaGCCACAATGGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFELASL*PQWGDL
Trigger: AAGGTCTCCCCATTGTGGTCACAGTGACGCTAGCTC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTCTACTCCAAGGCTCTaGGCTGGGGGTCCATCCATA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSTPRL*AGGPSI
Trigger: TATGGATGGACCCCCAGCTCAGAGCCTTGGAGTAGA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CTATTACTGCAGAGTCCAATCTCAAACACAGACTTGGTCTGGGATCTGGAACTTCTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: LLLQSPISNTDLVWDLELLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGATTGGACTCTGCAGTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAACTTGCCCTTCTAAATaGTCCTCAGACTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQTCPSK*SSDCNS
Trigger: GGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAGGAAATACAGTAGCTaGAATATGGCACTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQRKYSS*NMALLG
Trigger: TCCCAGGAGTGCCATATTTCAGCTACTGTATTTCCT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACTTGATAGCCCTGCATaGATTCTGCCAAACCAAAGA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLDSPA*ILPNQR
Trigger: TCTTTGGTTTGGCAGAATTCATGCAGGGCTATCAAG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGSRASV*SNFPSR
Trigger: GCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSRASV*SNFPSR
Trigger: GCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAAGATCTCCATTAGTTaGAGCTGGCTGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYKISIS*SWLRSC
Trigger: ACAGCTCCTCAGCCAGCTGCAACTAATGGAGATCTT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAAGATCTCCATTAGTTaGAGCTGGCTGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEKISIS*SWLRSC
Trigger: ACAGCTCCTCAGCCAGCTGCAACTAATGGAGATCTT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAATGACAACACCCTTTaGTTTGCCACATCTGACCAG +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQNDNTL*FATSDQ
Trigger: CTGGTCAGATGTGGCAAAGCAAAGGGTGTTGTCATT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACAGAGGGGTTTTTGGTaGCTCTTCTGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGQRGFW*LFCLHH
Trigger: ATGATGCAAGCAGAAGAGGCACCAAAAACCCCTCTG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCAGAGGGGTTTTTGGTaGCTCTTCTGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYQRGFW*LFCLHH
Trigger: ATGATGCAAGCAGAAGAGGCACCAAAAACCCCTCTG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATTCCTAAGAGGTCCATaGTCTTCTGCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGFLRGP*SSAEGF
Trigger: AAACCCCTCTGCAGAAGAGCATGGACCTCTTAGGAA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTCCTAAGAGGTCCATaGTCTTCTGCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYFLRGP*SSAEGF
Trigger: AAACCCCTCTGCAGAAGAGCATGGACCTCTTAGGAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTCCTAAGAGGTCCATaGTCTTCTGCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEFLRGP*SSAEGF
Trigger: AAACCCCTCTGCAGAAGAGCATGGACCTCTTAGGAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYRNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATGTCTGCTGCCTCTTTaGAAACATCTGTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQCLLPL*KHLYQS
Trigger: AGACTGGTACAGATGTTTGCAAAGAGGCAGCAGACA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTGTATCTCAACCAGCTaGTGTCCACTCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYCISTS*CPLLSQ
Trigger: CTGGGAGAGGAGTGGACAGCAGCTGGTTGAGATACA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGCTGTCTTTCCAGTTGCGAGGAGGTTTACGAATGACATCTTTATCCACTGGTACAACAGATCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: MLSFQLRGGLRMTSLSTGTTDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT...ACCAGTGGATAAAGATGTCATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR GCA 90 bp ACAACAGATCCAGTATGCTTAGGCTCTCAGTCTGAAAAACCTTCTGAAGCGGAGTCTGGATCTTTTCCCTaGTCCTTTCAACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: TTDPVCLGSQSEKPSEAESGSFP*SFQPSL
Trigger: TAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGA...CTCCGCTTCAGAAGGTTTTTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR GCA 90 bp TTACTGCAGAGTCCAATCTCAAACACAGACTTGGTCTGGGATCTGGAACTTAGTGATGTCGAACTAACATaGTTCTGGATCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLQSPISNTDLVWDLELSDVELT*FWIFSL
Trigger: CAGGGAAAAGATCCAGAAGCATGTTAGTTCGACATC...ACTAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGATTGGACTCTGCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGCCCTGCATGAATTCTaGCAAACCAAAGACATACCT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQALHEF*QTKDIP
Trigger: AGGTATGTCTTTGGTTTGGCAGAATTCATGCAGGGC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCAAAGAAGCTTCAGATaGACACAGAGCAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYQRSFR*TQSKTS
Trigger: GCTGGTCTTGCTCTGTGTGCATCTGAAGCTTCTTTG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAAAGAGGGTCCTTGTCTaGACCTCCTTGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILKRVLV*TSLSAT
Trigger: GGTTGCTGACAAGGAGGTGCAGACAAGGACCCTCTT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR CCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACCTTCACGCACACAATaGCATTCTGGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREPSRTQ*HSGGTS
Trigger: ACTTGTGCCACCAGAATGCCATTGTGTGCGTGAAGG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSANCIT*NQVSGK
Trigger: CTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: FTPSPVMATTEPFFCSDLVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...TAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATCCAAGGCTCTGAGCTaGGGGTCCATCCATAATAAT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGSKALS*GSIHNN
Trigger: ATTATTATGGATGGACCCCCAGCTCAGAGCCTTGGA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATCCAAGGCTCTGAGCTaGGGGTCCATCCATAATAAT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNESKALS*GSIHNN
Trigger: ATTATTATGGATGGACCCCCAGCTCAGAGCCTTGGA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACACATCTTCTGTCAGTaGCAGTCCTGTCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREHIFCQ*QSCLQM
Trigger: CATCTGGAGACAGGACTGCCACTGACAGAAGATGTG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCACATCTTCTGTCAGTaGCAGTCCTGTCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSHIFCQ*QSCLQM
Trigger: CATCTGGAGACAGGACTGCCACTGACAGAAGATGTG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CTATTACTGCAGAGTCCAATCTCAAACACAGACTTGGTCTGGGATCTGGAACTTGAACTAACATGCTTCTaGATCTTTTCCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLLQSPISNTDLVWDLELELTCF*IFSLLL
Trigger: AAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTC...AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGATTGGACTCTGCAGTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYLVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATTAGTTGCAGCTGGCTaGGGAGCTGTCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALLVAAG*GAVTLE
Trigger: TTCTAAGGTGACAGCTCCTCAGCCAGCTGCAACTAA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: TASFTPSPVMATTEPFFCSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...ACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYTSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILTSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAACTTGCCCTTCTAAATaGTCCTCAGACTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNETCPSK*SSDCNS
Trigger: GGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAAAAGAACAGTGATCTaGCAGTGGTCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEKRTVI*QWSHPV
Trigger: CACAGGATGTGACCACTGTCAGATCACTGTTCTTTT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATTTTCCATCGAAACTaGACTCGGGTTGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGIFHRN*TRVDGY
Trigger: GTAGCCATCAACCCGAGTGCAGTTTCGATGGAAAAT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000533801.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAATTTTCCATCGAAACTaGACTCGGGTTGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEIFHRN*TRVDGY
Trigger: GTAGCCATCAACCCGAGTGCAGTTTCGATGGAAAAT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428331.6
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAACAACGATAAGTATTaGCACAGTGATACTGACGGC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQNNDKY*HSDTDG
Trigger: GCCGTCAGTATCACTGTGGCAATACTTATCGTTGTT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSSRASV*SNFPSR
Trigger: GCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAAGATCTCCATTAGTTaGAGCTGGCTGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREKISIS*SWLRSC
Trigger: ACAGCTCCTCAGCCAGCTGCAACTAATGGAGATCTT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAAGATCTCCATTAGTTaGAGCTGGCTGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSKISIS*SWLRSC
Trigger: ACAGCTCCTCAGCCAGCTGCAACTAATGGAGATCTT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAATGACAACACCCTTTaGTTTGCCACATCTGACCAG +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGNDNTL*FATSDQ
Trigger: CTGGTCAGATGTGGCAAAGCAAAGGGTGTTGTCATT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAATGACAACACCCTTTaGTTTGCCACATCTGACCAG +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNENDNTL*FATSDQ
Trigger: CTGGTCAGATGTGGCAAAGCAAAGGGTGTTGTCATT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAATGACAACACCCTTTaGTTTGCCACATCTGACCAG +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYNDNTL*FATSDQ
Trigger: CTGGTCAGATGTGGCAAAGCAAAGGGTGTTGTCATT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACAGAGGGGTTTTTGGTaGCTCTTCTGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREQRGFW*LFCLHH
Trigger: ATGATGCAAGCAGAAGAGGCACCAAAAACCCCTCTG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTTCCTAAGAGGTCCATaGTCTTCTGCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSFLRGP*SSAEGF
Trigger: AAACCCCTCTGCAGAAGAGCATGGACCTCTTAGGAA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAACCTTCAGGAATTGCTaGTACAGCCAAACTTACACT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQTFRNC*YSQTYT
Trigger: AGTGTAAGTTTGGCTGTAGCAGCAATTCCTGAAGGT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAATAATTACAGCCATCCACTTTTaGTCAGAGCTAAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: PSPVMATTEPFFCSDLIITAIHF*SELKGY
Trigger: ATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGT...AATTATTAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR GCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFRNSNV*SLQSNC
Trigger: GCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAACAACAGATCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQTTDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGATGTCGAACTAACATaGTTCTGGATCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQDVELT*FWIFSL
Trigger: CAGGGAAAAGATCCAGAAGCATGTTAGTTCGACATC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACACACAATGGCATTCTaGTGGCACAAGTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQHTMAF*WHKFTQ
Trigger: TTGAGTAAACTTGTGCCACCAGAATGCCATTGTGTG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACCTTCACGCACACAATaGCATTCTGGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILPSRTQ*HSGGTS
Trigger: ACTTGTGCCACCAGAATGCCATTGTGTGCGTGAAGG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILANCIT*NQVSGK
Trigger: CTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGC...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALANCIT*NQVSGK
Trigger: CTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYANCIT*NQVSGK
Trigger: CTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATCTCACCTGTCAAGCTaGACTCATCAATGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQSHLSS*THQWKD
Trigger: ATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILLQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACTGCAGAGGGGTTTTTaGTGCCTCTTCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALLQRGF*CLFCLH
Trigger: ATGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILTSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYTSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCAAAAGAAACAACAGATCCAGTATGCTTAGGCTCTCAGTCTGAAAAACCTTCTGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PKETTDPVCLGSQSEKPSDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...AGAAGGTTTTTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGTTTCTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYNTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGNTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNENTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATAGTCCTGTCTCCAGATaGGGATGTATCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYSPVSR*GCISTS
Trigger: GCTGGTTGAGATACATCCCCATCTGGAGACAGGACT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAAGTCCTGTCTCCAGATaGGGATGTATCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILSPVSR*GCISTS
Trigger: GCTGGTTGAGATACATCCCCATCTGGAGACAGGACT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACACATCTTCTGTCAGTaGCAGTCCTGTCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILHIFCQ*QSCLQM
Trigger: CATCTGGAGACAGGACTGCCACTGACAGAAGATGTG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGAACTAACATGCTTCTaGATCTTTTCCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQELTCF*IFSLLL
Trigger: AAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATGCTTGCAACTTCACTaGCTGGTAATTCACTTGCTT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNECLQLH*LVIHLL
Trigger: AAGCAAGTGAATTACCAGTCAGTGAAGTTGCAAGCA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATTGTTTAGACCATTCTaGAGATCAGCTTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLFRPF*RSAWRM
Trigger: CATTCTCCAAGCTGATCTTCAGAATGGTCTAAACAA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAACGGCATCATCAAACTaGTGCATTAAAACACTGATG +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQTASSN*CIKTLM
Trigger: CATCAGTGTTTTAATGCATCAGTTTGATGATGCCGT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATCTGAACGATATTCCTaGACAAAGGCAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQSERYS*TKATVT
Trigger: TGTTACAGTTGCCTTTGTTCAGGAATATCGTTCAGA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAATAATTGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: PSPVMATTEPFFCSDLIIGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...AATTATTAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFTSLCC*VSVKVC
Trigger: GCAGACCTTGACACTTACTCAGCAGCAGAGAGATGT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAACTGCAGTCTCCTGTaGATCTCCAGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQNCSLL*ISSNHF
Trigger: AAAATGATTACTGGAGATTCACAGGAGACTGCAGTT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGAGGAGGTTTACGAATaGCATCTTTATCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEEEVYE*HLYPLV
Trigger: AACCAGTGGATAAAGATGTCATTCGTAAACCTCCTC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGAGGAGGTTTACGAATaGCATCTTTATCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGEEVYE*HLYPLV
Trigger: AACCAGTGGATAAAGATGTCATTCGTAAACCTCCTC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAACAACGATAAGTATTaGCACAGTGATACTGACGGC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYNNDKY*HSDTDG
Trigger: GCCGTCAGTATCACTGTGGCAATACTTATCGTTGTT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAACAACGATAAGTATTaGCACAGTGATACTGACGGC +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGNNDKY*HSDTDG
Trigger: GCCGTCAGTATCACTGTGGCAATACTTATCGTTGTT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYSRASV*SNFPSR
Trigger: GCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAAGATCTCCATTAGTTaGAGCTGGCTGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALKISIS*SWLRSC
Trigger: ACAGCTCCTCAGCCAGCTGCAACTAATGGAGATCTT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAATGACAACACCCTTTaGTTTGCCACATCTGACCAG +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSNDNTL*FATSDQ
Trigger: CTGGTCAGATGTGGCAAAGCAAAGGGTGTTGTCATT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAACCTTCAGGAATTGCTaGTACAGCCAAACTTACACT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNETFRNC*YSQTYT
Trigger: AGTGTAAGTTTGGCTGTAGCAGCAATTCCTGAAGGT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCATCTCTGGTCTGTCCTaGTGTGTTCGGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFISGLS*CVRCTH
Trigger: GTGTGTACACCGAACACAGCAGGACAGACCAGAGAT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAATAATTTTCATCTTGTGCGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: MATTEPFFCSDLIIFILCVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...GCACAAGATGAAAATTATTAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATGTCTGCTGCCTCTTTaGAAACATCTGTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRECLLPL*KHLYQS
Trigger: AGACTGGTACAGATGTTTGCAAAGAGGCAGCAGACA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTGTCTGCTGCCTCTTTaGAAACATCTGTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSCLLPL*KHLYQS
Trigger: AGACTGGTACAGATGTTTGCAAAGAGGCAGCAGACA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATACAACAGATCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYTTDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATCTGGATCTTTTCCCTaGTCCTTTCAACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQSGSFP*SFQPSL
Trigger: TAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGATGTCGAACTAACATaGTTCTGGATCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEDVELT*FWIFSL
Trigger: CAGGGAAAAGATCCAGAAGCATGTTAGTTCGACATC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGATGTCGAACTAACATaGTTCTGGATCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYDVELT*FWIFSL
Trigger: CAGGGAAAAGATCCAGAAGCATGTTAGTTCGACATC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCTCCTTACACTCAACTaGCTCAGTAACAATGACTCA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLLTLN*LSNNDS
Trigger: TGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACTCCTTACACTCAACTaGCTCAGTAACAATGACTCA +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELLTLN*LSNNDS
Trigger: TGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATTAAGTAGAATAAACTaGAGCCAGCTCCTTACACTC +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLSRIN*SQLLTL
Trigger: GAGTGTAAGGAGCTGGCTGCAGTTTATTCTACTTAA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCACACAATGGCATTCTaGTGGCACAAGTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYHTMAF*WHKFTQ
Trigger: TTGAGTAAACTTGTGCCACCAGAATGCCATTGTGTG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCCTTCACGCACACAATaGCATTCTGGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFPSRTQ*HSGGTS
Trigger: ACTTGTGCCACCAGAATGCCATTGTGTGCGTGAAGG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFANCIT*NQVSGK
Trigger: CTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATCTCACCTGTCAAGCTaGACTCATCAATGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGSHLSS*THQWKD
Trigger: ATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCTCACCTGTCAAGCTaGACTCATCAATGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSHLSS*THQWKD
Trigger: ATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTCCATTAGTTGCAGCTaGCTGAGGAGCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSISCS*LRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATCTCCTGAGACTGACTaGGAAGTTTTGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQSPETD*EVLEYN
Trigger: ATTGTATTCCAAAACTTCCCAGTCAGTCTCAGGAGA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAATAATTTTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: PSPVMATTEPFFCSDLIIFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...AATTATTAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCACATCTGTACCAGTCTaGCCCATCGCAACTCCAATG +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFTSVPV*PIATPM
Trigger: CATTGGAGTTGCGATGGGCCAGACTGGTACAGATGT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTCCAAGGCTCTGAGCTaGGGGTCCATCCATAATAAT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYSKALS*GSIHNN
Trigger: ATTATTATGGATGGACCCCCAGCTCAGAGCCTTGGA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATCCAAGGCTCTGAGCTaGGGGTCCATCCATAATAAT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALSKALS*GSIHNN
Trigger: ATTATTATGGATGGACCCCCAGCTCAGAGCCTTGGA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRENTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAACACAGACTTGGTCTaGGATCTGGAACTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSNTDLV*DLELSA
Trigger: TGCACTAAGTTCCAGATCCCAGACCAAGTCTGTGTT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTGTCCCATGATGGATCCAAGAACTGCATAGCAAAACATTCTATTACTGCAGAGTCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: LSHDGSKNCIAKHSITAESQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...CTCTGCAGTAATAGAATGTTTTGCTATGCAGTTCTTGGATCCATCATGGGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATGCAGACATGTTTATaGTCAGGTAGTAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGMQTCL*SGSRPV
Trigger: CACTGGTCTACTACCTGACCATAAACATGTCTGCAT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGAACTAACATGCTTCTaGATCTTTTCCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEELTCF*IFSLLL
Trigger: AAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTGCTTGCAACTTCACTaGCTGGTAATTCACTTGCTT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSCLQLH*LVIHLL
Trigger: AAGCAAGTGAATTACCAGTCAGTGAAGTTGCAAGCA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTGTTTAGACCATTCTaGAGATCAGCTTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLFRPF*RSAWRM
Trigger: CATTCTCCAAGCTGATCTTCAGAATGGTCTAAACAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATACGGCATCATCAAACTaGTGCATTAAAACACTGATG +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYTASSN*CIKTLM
Trigger: CATCAGTGTTTTAATGCATCAGTTTGATGATGCCGT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAACGGCATCATCAAACTaGTGCATTAAAACACTGATG +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNETASSN*CIKTLM
Trigger: CATCAGTGTTTTAATGCATCAGTTTGATGATGCCGT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATCTGAACGATATTCCTaGACAAAGGCAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGSERYS*TKATVT
Trigger: TGTTACAGTTGCCTTTGTTCAGGAATATCGTTCAGA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCTGAACGATATTCCTaGACAAAGGCAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSERYS*TKATVT
Trigger: TGTTACAGTTGCCTTTGTTCAGGAATATCGTTCAGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNESMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAACTGCAGTCTCCTGTaGATCTCCAGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYNCSLL*ISSNHF
Trigger: AAAATGATTACTGGAGATTCACAGGAGACTGCAGTT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAATTTGTGAAAGCTGCTaGACATCCATTGCATCTATT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQICESC*TSIASI
Trigger: AATAGATGCAATGGATGTTCAGCAGCTTTCACAAAT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGAGGAGGTTTACGAATaGCATCTTTATCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSEEVYE*HLYPLV
Trigger: AACCAGTGGATAAAGATGTCATTCGTAAACCTCCTC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAAAAGAACAGTGATCTaGCAGTGGTCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALKRTVI*QWSHPV
Trigger: CACAGGATGTGACCACTGTCAGATCACTGTTCTTTT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACATACTCAAAACAAATaGCCTATACCTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQHTQNK*PIPHQA
Trigger: AGCTTGATGAGGTATAGGTCATTTGTTTTGAGTATG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAATTTTCCATCGAAACTaGACTCGGGTTGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALIFHRN*TRVDGY
Trigger: GTAGCCATCAACCCGAGTGCAGTTTCGATGGAAAAT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428331.6
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAACAACGATAAGTATTaGCACAGTGATACTGACGGC +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRENNDKY*HSDTDG
Trigger: GCCGTCAGTATCACTGTGGCAATACTTATCGTTGTT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSRASV*SNFPSR
Trigger: GCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATAATGACAACACCCTTTaGTTTGCCACATCTGACCAG +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYNDNTL*FATSDQ
Trigger: CTGGTCAGATGTGGCAAAGCAAAGGGTGTTGTCATT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCAGAGGGGTTTTTGGTaGCTCTTCTGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFQRGFW*LFCLHH
Trigger: ATGATGCAAGCAGAAGAGGCACCAAAAACCCCTCTG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTTCCTAAGAGGTCCATaGTCTTCTGCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFFLRGP*SSAEGF
Trigger: AAACCCCTCTGCAGAAGAGCATGGACCTCTTAGGAA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAACCTTCAGGAATTGCTaGTACAGCCAAACTTACACT +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRETFRNC*YSQTYT
Trigger: AGTGTAAGTTTGGCTGTAGCAGCAATTCCTGAAGGT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTACCTTCAGGAATTGCTaGTACAGCCAAACTTACACT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSTFRNC*YSQTYT
Trigger: AGTGTAAGTTTGGCTGTAGCAGCAATTCCTGAAGGT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTACAGCCATCCACTTTTaGTCAGAGCTAAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSTAIHF*SELKGY
Trigger: ATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGTCTGCTGCCTCTTTaGAAACATCTGTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILCLLPL*KHLYQS
Trigger: AGACTGGTACAGATGTTTGCAAAGAGGCAGCAGACA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATTGATCCACAAAATCTaGATGGCATTGAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLIHKI*MALRGL
Trigger: TAATCCTCTCAATGCCATGCAGATTTTGTGGATCAA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTACAACAGATCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSTTDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCTGGATCTTTTCCCTaGTCCTTTCAACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSGSFP*SFQPSL
Trigger: TAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGATGTCGAACTAACATaGTTCTGGATCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSDVELT*FWIFSL
Trigger: CAGGGAAAAGATCCAGAAGCATGTTAGTTCGACATC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359644.7
ENST00000504381.5
ENST00000504612.5
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAATTTCATTTGGGACTaGCAGCAGGTTAAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQNFIWD*QQVKVL
Trigger: TAAGACTTTAACCTGCTGGCAGTCCCAAATGAAATT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATTAGACTTCTTTAAGTaGAGAAGGTGGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLDFFK*RRWFRF
Trigger: AAACCTGAACCACCTTCTGCACTTAAAGAAGTCTAA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCAAAGAAGCTTCAGATaGACACAGAGCAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFQRSFR*TQSKTS
Trigger: GCTGGTCTTGCTCTGTGTGCATCTGAAGCTTCTTTG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTAAGTAGAATAAACTaGAGCCAGCTCCTTACACTC +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLSRIN*SQLLTL
Trigger: GAGTGTAAGGAGCTGGCTGCAGTTTATTCTACTTAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTAAGTAGAATAAACTaGAGCCAGCTCCTTACACTC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELSRIN*SQLLTL
Trigger: GAGTGTAAGGAGCTGGCTGCAGTTTATTCTACTTAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAGCAAATGTTCTCCTTaGTGTTTCCTCTTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSKCSP*CFLFWV
Trigger: TACCCAAAAGAGGAAACAGCAAGGAGAACATTTGCT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505330.5
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAACAATGGCATTCTGGTaGCACAAGTTTACTCAATTC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNETMAFW*HKFTQF
Trigger: GAATTGAGTAAACTTGTGCCACCAGAATGCCATTGT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACACACAATGGCATTCTaGTGGCACAAGTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREHTMAF*WHKFTQ
Trigger: TTGAGTAAACTTGTGCCACCAGAATGCCATTGTGTG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTCTCACCTGTCAAGCTaGACTCATCAATGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSSHLSS*THQWKD
Trigger: ATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCTCCTGAGACTGACTaGGAAGTTTTGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSPETD*EVLEYN
Trigger: ATTGTATTCCAAAACTTCCCAGTCAGTCTCAGGAGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATCTCCTGAGACTGACTaGGAAGTTTTGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGSPETD*EVLEYN
Trigger: ATTGTATTCCAAAACTTCCCAGTCAGTCTCAGGAGA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCTCCATCTCCTGTCATaGCTACAACTGAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLHLLS*LQLNRS
Trigger: AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTCCAAGGCTCTGAGCTaGGGGTCCATCCATAATAAT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSKALS*GSIHNN
Trigger: ATTATTATGGATGGACCCCCAGCTCAGAGCCTTGGA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSSQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACAGGTAGTAGACCAGTaGAAAAGATCTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGQVVDQ*KRSYFR
Trigger: CCTGAAATAAGATCTTTTCCACTGGTCTACTACCTG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTATGCAGACATGTTTATaGTCAGGTAGTAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSMQTCL*SGSRPV
Trigger: CACTGGTCTACTACCTGACCATAAACATGTCTGCAT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATTTAAGTGCAGAAGGTaGTTCAGGTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQFKCRR*FRFCLF
Trigger: AAAAAGGCAAAACCTGAACCACCTTCTGCACTTAAA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGAAATATGGCACTCCTaGGAATCAACTTCTAAACCA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYEIWHS*ESTSKP
Trigger: TGGTTTAGAAGTTGATTCCCAGGAGTGCCATATTTC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATGCTGTTTCCTCTTTTaGGTAGAGTTCCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRECCFLF*VEFLVK
Trigger: TTTCACCAGGAACTCTACCCAAAAGAGGAAACAGCA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAATAAGAGAATCTAGATaGAGGCAACAGACTATCCAT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQIRESR*RQQTIH
Trigger: ATGGATAGTCTGTTGCCTCCATCTAGATTCTCTTAT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505330.5
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGCTTGCAACTTCACTaGCTGGTAATTCACTTGCTT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILCLQLH*LVIHLL
Trigger: AAGCAAGTGAATTACCAGTCAGTGAAGTTGCAAGCA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATTGTTTAGACCATTCTaGAGATCAGCTTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRELFRPF*RSAWRM
Trigger: CATTCTCCAAGCTGATCTTCAGAATGGTCTAAACAA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAACGGCATCATCAAACTaGTGCATTAAAACACTGATG +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRETASSN*CIKTLM
Trigger: CATCAGTGTTTTAATGCATCAGTTTGATGATGCCGT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATCTGAACGATATTCCTaGACAAAGGCAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRESERYS*TKATVT
Trigger: TGTTACAGTTGCCTTTGTTCAGGAATATCGTTCAGA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAACTGCAGTCTCCTGTaGATCTCCAGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRENCSLL*ISSNHF
Trigger: AAAATGATTACTGGAGATTCACAGGAGACTGCAGTT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAACTGCAGTCTCCTGTaGATCTCCAGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSNCSLL*ISSNHF
Trigger: AAAATGATTACTGGAGATTCACAGGAGACTGCAGTT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATATTTGTGAAAGCTGCTaGACATCCATTGCATCTATT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYICESC*TSIASI
Trigger: AATAGATGCAATGGATGTTCAGCAGCTTTCACAAAT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAATTTGTGAAAGCTGCTaGACATCCATTGCATCTATT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEICESC*TSIASI
Trigger: AATAGATGCAATGGATGTTCAGCAGCTTTCACAAAT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGAGGAGGTTTACGAATaGCATCTTTATCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYEEVYE*HLYPLV
Trigger: AACCAGTGGATAAAGATGTCATTCGTAAACCTCCTC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTTTTAGTCAAAATGCTGTCTTTCCAGTTGCGAGGAGGTTTACGAATGACATCTAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FLVKMLSFQLRGGLRMTSKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...AGATGTCATTCGTAAACCTCCTCGCAACTGGAAAGACAGCATTTTGACTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR TCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCTTGATAGCCCTGCATaGATTCTGCCAAACCAAAGA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLDSPA*ILPNQR
Trigger: TCTTTGGTTTGGCAGAATTCATGCAGGGCTATCAAG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACATACTCAAAACAAATaGCCTATACCTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEHTQNK*PIPHQA
Trigger: AGCTTGATGAGGTATAGGTCATTTGTTTTGAGTATG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAAACAACGATAAGTATTaGCACAGTGATACTGACGGC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILNNDKY*HSDTDG
Trigger: GCCGTCAGTATCACTGTGGCAATACTTATCGTTGTT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAATGACAACACCCTTTaGTTTGCCACATCTGACCAG +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFNDNTL*FATSDQ
Trigger: CTGGTCAGATGTGGCAAAGCAAAGGGTGTTGTCATT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATACCTTCAGGAATTGCTaGTACAGCCAAACTTACACT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYTFRNC*YSQTYT
Trigger: AGTGTAAGTTTGGCTGTAGCAGCAATTCCTGAAGGT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACCTTCAGGAATTGCTaGTACAGCCAAACTTACACT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTFRNC*YSQTYT
Trigger: AGTGTAAGTTTGGCTGTAGCAGCAATTCCTGAAGGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAACAGCCATCCACTTTTaGTCAGAGCTAAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILTAIHF*SELKGY
Trigger: ATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACAGCCATCCACTTTTaGTCAGAGCTAAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTAIHF*SELKGY
Trigger: ATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGTAAGTGTCAAGGTCTaGCCTTTGCTCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFVSVKV*PLLWYV
Trigger: TACATACCAGAGCAAAGGGCAGACCTTGACACTTAC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTGTCTGCTGCCTCTTTaGAAACATCTGTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFCLLPL*KHLYQS
Trigger: AGACTGGTACAGATGTTTGCAAAGAGGCAGCAGACA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATTGATCCACAAAATCTaGATGGCATTGAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGLIHKI*MALRGL
Trigger: TAATCCTCTCAATGCCATGCAGATTTTGTGGATCAA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTGATCCACAAAATCTaGATGGCATTGAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELIHKI*MALRGL
Trigger: TAATCCTCTCAATGCCATGCAGATTTTGTGGATCAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTGATCCACAAAATCTaGATGGCATTGAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLIHKI*MALRGL
Trigger: TAATCCTCTCAATGCCATGCAGATTTTGTGGATCAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATACAACAGATCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYTTDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACAACAGATCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTTDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATCTGGATCTTTTCCCTaGTCCTTTCAACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRESGSFP*SFQPSL
Trigger: TAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTCTGGATCTTTTCCCTaGTCCTTTCAACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSSGSFP*SFQPSL
Trigger: TAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
CDS-3UTR GCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAATTTCATTTGGGACTaGCAGCAGGTTAAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYNFIWD*QQVKVL
Trigger: TAAGACTTTAACCTGCTGGCAGTCCCAAATGAAATT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAACATGGTATCTGAGCTaGTTACATTACAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQTWYLS*LHYKKK
Trigger: CTTTTTCTTGTAATGTAAGCAGCTCAGATACCATGT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTACAATGGCATTCTGGTaGCACAAGTTTACTCAATTC +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSTMAFW*HKFTQF
Trigger: GAATTGAGTAAACTTGTGCCACCAGAATGCCATTGT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCACACAATGGCATTCTaGTGGCACAAGTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYHTMAF*WHKFTQ
Trigger: TTGAGTAAACTTGTGCCACCAGAATGCCATTGTGTG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCTGACTGGGAAGTTTTaGAATACAATCCCAGACGAC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLTGKF*NTIPDD
Trigger: GTCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTCTCCTGAGACTGACTaGGAAGTTTTGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSSPETD*EVLEYN
Trigger: ATTGTATTCCAAAACTTCCCAGTCAGTCTCAGGAGA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFDIFIH*FYSKAL
Trigger: CAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILSQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALSQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYSQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACAGGTAGTAGACCAGTaGAAAAGATCTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREQVVDQ*KRSYFR
Trigger: CCTGAAATAAGATCTTTTCCACTGGTCTACTACCTG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCAGGTAGTAGACCAGTaGAAAAGATCTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSQVVDQ*KRSYFR
Trigger: CCTGAAATAAGATCTTTTCCACTGGTCTACTACCTG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGAACTAACATGCTTCTaGATCTTTTCCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYELTCF*IFSLLL
Trigger: AAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359644.7
ENST00000504381.5
ENST00000504612.5
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTTAAGTGCAGAAGGTaGTTCAGGTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYFKCRR*FRFCLF
Trigger: AAAAAGGCAAAACCTGAACCACCTTCTGCACTTAAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACCATTTGTTTGGGTTTaGGGACTTTTTATTCTAAGT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQPFVWV*GLFILS
Trigger: ACTTAGAATAAAAAGTCCCCAAACCCAAACAAATGG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAATAAAAGCTAAGGAGTaGTTCATCCTGACAGATTAT +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQIKAKE*FILTDY
Trigger: ATAATCTGTCAGGATGAACCACTCCTTAGCTTTTAT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATTCCATCTAACGACATaGAACAATGTACATTTGACA +
Preference number: 4 (lower is better)
Translates to: PLELALLNDPQTAIPSLQFHLTT*NNVHLT
Trigger: TGTCAAATGTACATTGTTCCATGTCGTTAGATGGAA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGCTGTTTCCTCTTTTaGGTAGAGTTCCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILCCFLF*VEFLVK
Trigger: TTTCACCAGGAACTCTACCCAAAAGAGGAAACAGCA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATAAGAGAATCTAGATaGAGGCAACAGACTATCCAT +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGIRESR*RQQTIH
Trigger: ATGGATAGTCTGTTGCCTCCATCTAGATTCTCTTAT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATGTTCTTCGGCTCTTTaGTTTCTCAGCGTCGATAAA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALCSSAL*FLSVDK
Trigger: TTTATCGACGCTGAGAAACCAAAGAGCCGAAGAACA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505330.5
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTGTTCTTCGGCTCTTTaGTTTCTCAGCGTCGATAAA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYCSSAL*FLSVDK
Trigger: TTTATCGACGCTGAGAAACCAAAGAGCCGAAGAACA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTGTTTAGACCATTCTaGAGATCAGCTTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILLFRPF*RSAWRM
Trigger: CATTCTCCAAGCTGATCTTCAGAATGGTCTAAACAA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTGTTTAGACCATTCTaGAGATCAGCTTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYLFRPF*RSAWRM
Trigger: CATTCTCCAAGCTGATCTTCAGAATGGTCTAAACAA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATACGGCATCATCAAACTaGTGCATTAAAACACTGATG +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYTASSN*CIKTLM
Trigger: CATCAGTGTTTTAATGCATCAGTTTGATGATGCCGT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACGGCATCATCAAACTaGTGCATTAAAACACTGATG +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTASSN*CIKTLM
Trigger: CATCAGTGTTTTAATGCATCAGTTTGATGATGCCGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCTGAACGATATTCCTaGACAAAGGCAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILSERYS*TKATVT
Trigger: TGTTACAGTTGCCTTTGTTCAGGAATATCGTTCAGA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTCTGAACGATATTCCTaGACAAAGGCAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYSERYS*TKATVT
Trigger: TGTTACAGTTGCCTTTGTTCAGGAATATCGTTCAGA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAGGTATTCAGCTTTTCTaGTGTAGTCTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILGIQLF*CSLVEV
Trigger: GACTTCAACAAGACTACATCAGAAAAGCTGAATACC...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAACTGCAGTCTCCTGTaGATCTCCAGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALNCSLL*ISSNHF
Trigger: AAAATGATTACTGGAGATTCACAGGAGACTGCAGTT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAAACTGCAGTCTCCTGTaGATCTCCAGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILNCSLL*ISSNHF
Trigger: AAAATGATTACTGGAGATTCACAGGAGACTGCAGTT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTATTTGTGAAAGCTGCTaGACATCCATTGCATCTATT +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSICESC*TSIASI
Trigger: AATAGATGCAATGGATGTTCAGCAGCTTTCACAAAT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGAGGAGGTTTACGAATaGCATCTTTATCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFEEVYE*HLYPLV
Trigger: AACCAGTGGATAAAGATGTCATTCGTAAACCTCCTC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAAAACACAAAGCATGTaGAGGTCATTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALKTQSM*RSLLCL
Trigger: GAGACACAACAATGACCTTCACATGCTTTGTGTTTT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCTAGTAATTGTCCCATaGTGGATCCAAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLVIVP*WIQELH
Trigger: ATGCAGTTCTTGGATCCATCATGGGACAATTACTAG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAACAGCAAGGCATTTATaGAGCCAGAAGAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILTARHL*SQKRKT
Trigger: TGTTTTTCTCTTCTGGCTTCATAAATGCCTTGCTGT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAATGTTACTTCTCGATaGAAGATCTCCATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSNVTSR*KISISC
Trigger: GCAACTAATGGAGATCTTGCATCGAGAAGTAACATT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAATGTTACTTCTCGATaGAAGATCTCCATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRENVTSR*KISISC
Trigger: GCAACTAATGGAGATCTTGCATCGAGAAGTAACATT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCCAGTAACCTCAGCATaGAGACCATCTGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFPVTSA*RPSEVN
Trigger: ATTTACTTCAGATGGTCTGCATGCTGAGGTTACTGG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCACAGCCATCCACTTTTaGTCAGAGCTAAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFTAIHF*SELKGY
Trigger: ATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATTGATCCACAAAATCTaGATGGCATTGAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRELIHKI*MALRGL
Trigger: TAATCCTCTCAATGCCATGCAGATTTTGTGGATCAA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTTGATCCACAAAATCTaGATGGCATTGAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSLIHKI*MALRGL
Trigger: TAATCCTCTCAATGCCATGCAGATTTTGTGGATCAA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCACAACAGATCCAGTATaGTTAGGCTCTCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFTTDPV*LGSQSE
Trigger: TTCAGACTGAGAGCCTAAGCATACTGGATCTGTTGT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATCTGGATCTTTTCCCTaGTCCTTTCAACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALSGSFP*SFQPSL
Trigger: TAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCTCCTTACACTCAACTaGCTCAGTAACAATGACTCA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLLTLN*LSNNDS
Trigger: TGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCACACAATGGCATTCTaGTGGCACAAGTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFHTMAF*WHKFTQ
Trigger: TTGAGTAAACTTGTGCCACCAGAATGCCATTGTGTG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTCTCACCTGTCAAGCTaGACTCATCAATGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSHLSS*THQWKD
Trigger: ATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGCAGCTTTTTCACAATaGCCCTTTTCTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFAAFSQ*PFSSPF
Trigger: GAATGGTGAAGAAAAGGGCCATTGTGAAAAAGCTGC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGTCTGCCCTTTGCTCTaGTATGTAGTACAGTACTTA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFVCPLL*YVVQYL
Trigger: TAAGTACTGTACTACATACCAGAGCAAAGGGCAGAC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCTCCTGAGACTGACTaGGAAGTTTTGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILSPETD*EVLEYN
Trigger: ATTGTATTCCAAAACTTCCCAGTCAGTCTCAGGAGA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATCTCCTGAGACTGACTaGGAAGTTTTGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALSPETD*EVLEYN
Trigger: ATTGTATTCCAAAACTTCCCAGTCAGTCTCAGGAGA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTCTCCTGAGACTGACTaGGAAGTTTTGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYSPETD*EVLEYN
Trigger: ATTGTATTCCAAAACTTCCCAGTCAGTCTCAGGAGA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTCTCAAACACAGACTTaGTCTGGGATCTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSQTQT*SGIWNL
Trigger: TAAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCAGGTAGTAGACCAGTaGAAAAGATCTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYQVVDQ*KRSYFR
Trigger: CCTGAAATAAGATCTTTTCCACTGGTCTACTACCTG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACAGGTAGTAGACCAGTaGAAAAGATCTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILQVVDQ*KRSYFR
Trigger: CCTGAAATAAGATCTTTTCCACTGGTCTACTACCTG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGAACTAACATGCTTCTaGATCTTTTCCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFELTCF*IFSLLL
Trigger: AAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCCATTTGTTTGGGTTTaGGGACTTTTTATTCTAAGT +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYPFVWV*GLFILS
Trigger: ACTTAGAATAAAAAGTCCCCAAACCCAAACAAATGG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTCCATCTAACGACATaGAACAATGTACATTTGACA +
Preference number: 4 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYFHLTT*NNVHLT
Trigger: TGTCAAATGTACATTGTTCCATGTCGTTAGATGGAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTGCTGTTTCCTCTTTTaGGTAGAGTTCCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFCCFLF*VEFLVK
Trigger: TTTCACCAGGAACTCTACCCAAAAGAGGAAACAGCA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505330.5
3UTR CAA 72 bp AGTATCAAGTTTTTAGTCAAAATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATGACATCTTTATCCACT +
Preference number: 4 (lower is better)
Translates to: SIKFLVKMLSFQ*RGGLRMTSLST
Trigger: AGTGGATAAAGATGTCATTCGTAAACCTCCTCGCAACTGGAAAGACAGCATTTTGACTAAAAACTTGATACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAGCATGCAGACCATCTaGAGTAAATATGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSMQTI*SKYVSN
Trigger: GTTACTCACATATTTACTTCAGATGGTCTGCATGCT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATATTTGTGAAAGCTGCTaGACATCCATTGCATCTATT +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYICESC*TSIASI
Trigger: AATAGATGCAATGGATGTTCAGCAGCTTTCACAAAT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAATTTGTGAAAGCTGCTaGACATCCATTGCATCTATT +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILICESC*TSIASI
Trigger: AATAGATGCAATGGATGTTCAGCAGCTTTCACAAAT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCATAGCACATGGTATCTaGGCTGCTTACATTACAAGA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFIAHGI*AAYITR
Trigger: TCTTGTAATGTAAGCAGCTCAGATACCATGTGCTAT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAATGTTACTTCTCGATaGAAGATCTCCATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALNVTSR*KISISC
Trigger: GCAACTAATGGAGATCTTGCATCGAGAAGTAACATT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATAATGTTACTTCTCGATaGAAGATCTCCATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYNVTSR*KISISC
Trigger: GCAACTAATGGAGATCTTGCATCGAGAAGTAACATT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTCTGGATCTTTTCCCTaGTCCTTTCAACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSGSFP*SFQPSL
Trigger: TAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATTAGACTTCTTTAAGTaGAGAAGGTGGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALLDFFK*RRWFRF
Trigger: AAACCTGAACCACCTTCTGCACTTAAAGAAGTCTAA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTTAAGTAGAATAAACTaGAGCCAGCTCCTTACACTC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLSRIN*SQLLTL
Trigger: GAGTGTAAGGAGCTGGCTGCAGTTTATTCTACTTAA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCACAATGGCATTCTGGTaGCACAAGTTTACTCAATTC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFTMAFW*HKFTQF
Trigger: GAATTGAGTAAACTTGTGCCACCAGAATGCCATTGT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTTTCATCTTGTGCCTTaGGCTAGCTCTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFFHLVP*ASSVKY
Trigger: GTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATTTAAGTGCAGAAGGTaGTTCAGGTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALFKCRR*FRFCLF
Trigger: AAAAAGGCAAAACCTGAACCACCTTCTGCACTTAAA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGAAATATGGCACTCCTaGGAATCAACTTCTAAACCA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFEIWHS*ESTSKP
Trigger: TGGTTTAGAAGTTGATTCCCAGGAGTGCCATATTTC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCATTTGTGAAAGCTGCTaGACATCCATTGCATCTATT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFICESC*TSIASI
Trigger: AATAGATGCAATGGATGTTCAGCAGCTTTCACAAAT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR TCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCATACTCAAAACAAATaGCCTATACCTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFHTQNK*PIPHQA
Trigger: AGCTTGATGAGGTATAGGTCATTTGTTTTGAGTATG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAATGTTACTTCTCGATaGAAGATCTCCATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFNVTSR*KISISC
Trigger: GCAACTAATGGAGATCTTGCATCGAGAAGTAACATT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR GCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTTAGACTTCTTTAAGTaGAGAAGGTGGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLDFFK*RRWFRF
Trigger: AAACCTGAACCACCTTCTGCACTTAAAGAAGTCTAA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAATACTCGTGCTCAGCTaGAATCTAACGAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALILVLS*NLTKFL
Trigger: TAAAAATTTCGTTAGATTCCAGCTGAGCACGAGTAT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAAAAATGATAGCACATaGTATCTGAGCTGCTTACAT +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALKNDST*YLSCLH
Trigger: ATGTAAGCAGCTCAGATACCATGTGCTATCATTTTT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATTCCATCTAACGACATaGAACAATGTACATTTGACA +
Preference number: 4 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALFHLTT*NNVHLT
Trigger: TGTCAAATGTACATTGTTCCATGTCGTTAGATGGAA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATAGGGGATTTTTAAATTaGAGAATGCTTGCAACTTCA +
Preference number: 4 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYRGFLN*RMLATS
Trigger: TGAAGTTGCAAGCATTCTCCAATTTAAAAATCCCCT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504381.5
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAAAAATGATAGCACATaGTATCTGAGCTGCTTACAT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFKNDST*YLSCLH
Trigger: ATGTAAGCAGCTCAGATACCATGTGCTATCATTTTT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCCATTTGTTTGGGTTTaGGGACTTTTTATTCTAAGT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFPFVWV*GLFILS
Trigger: ACTTAGAATAAAAAGTCCCCAAACCCAAACAAATGG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCATAAAAGCTAAGGAGTaGTTCATCCTGACAGATTAT +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFIKAKE*FILTDY
Trigger: ATAATCTGTCAGGATGAACCACTCCTTAGCTTTTAT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CCA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTTCCATCTAACGACATaGAACAATGTACATTTGACA +
Preference number: 4 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFFHLTT*NNVHLT
Trigger: TGTCAAATGTACATTGTTCCATGTCGTTAGATGGAA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS GCA 90 bp GTGAGGGGACCCGTCACGGTCCGCCGGGCCGGCTCCGCGAGGCCGTaGTGGTCTGCTCCCGCCTCCGACTCCTGCGCTCCGCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: VRGPVTVRRAGSARP*WSAPASDSCAPPLP
Trigger: GGGGAGGGGCGGAGCGCAGGAGTCGGAGGCGGGAGCAGACCAGCACGGCCTCGCGGAGCCGGCCCGGCGGACCGTGACGGGTCCCCTCAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508532.5
ENST00000533801.6
CDS GCA 90 bp GCCCCGCGCGCCTCGGGAGAAGAGGAGCTGCTCGCGGGGCAGCGGTaGGAGGCGGGAGCCTGCTCCCGGCGTGAGAAGAAGCGAGCGGGA +
Preference number: 5 (lower is better)
Translates to: APRASGEEELLAGQR*EAGACSRREKKRAG
Trigger: TCCCGCTCGCTTCTTCTCACGCCGGGAGCAGGCTCCCGCCTCGCACCGCTGCCCCGCGAGCAGCTCCTCTTCTCCCGAGGCGCGCGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000504948.5
ENST00000505072.5
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCAGACGACTGGCGATaGCAACTGCAGTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGPDDWR*QLQSPV
Trigger: CACAGGAGACTGCAGTTGCAATCGCCAGTCGTCTGG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACACCAGACGACTGGCGATaGCAACTGCAGTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTPDDWR*QLQSPV
Trigger: CACAGGAGACTGCAGTTGCAATCGCCAGTCGTCTGG...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCCAGACGACTGGCGATaGCAACTGCAGTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTPDDWR*QLQSPV
Trigger: CACAGGAGACTGCAGTTGCAATCGCCAGTCGTCTGG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCCGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHIRGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCTGCAGAGGGGTTTTaGGTGCCTCTTCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSAEGF*VPLLLA
Trigger: TGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGATCTGCAGAGGGGTTTTaGGTGCCTCTTCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGSAEGF*VPLLLA
Trigger: TGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAGA...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACCTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: RVKAQTRLGTRLDLDTAHLITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...GTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAAAAGCAAGAGGGTCCTaGTCTGCACCTCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGKARGS*SAPPCQ
Trigger: CTGACAAGGAGGTGCAGACAAGGACCCTCTTGCTTT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS CCA 90 bp CTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTaGCAGTCCTGTCTCCAGATGGGGATGTATCTCAACCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGTRLDLDTAHIFCQ*QSCLQMGMYLNQLL
Trigger: CAGCAGCTGGTTGAGATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTCTGCAGAGGGGTTTTaGGTGCCTCTTCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSAEGF*VPLLLA
Trigger: TGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAGA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: RVKAQTRLGTRLDLDTAHMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...GTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS GCA 90 bp GTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATCTCAACCAGCTaGTGTCCACTCCTCTCCCAGAGCCAGACTTCAAGAAAAGATGAT +
Preference number: 5 (lower is better)
Translates to: VSGSPVSRWGCISTS*CPLLSQSQTSRKDD
Trigger: ATCATCTTTTCTTGAAGTCTGGCTCTGGGAGAGGAGTGGACAGCAGCTGGTTGAGATACATCCCCATCTGGAGACAGGACTGCCACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359644.7
ENST00000504381.5
ENST00000504612.5
CDS-3UTR CAA 90 bp GAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAACACCCTTTGCTTaGCCACATCTGACCAGTGTT +
Preference number: 5 (lower is better)
Translates to: EFQRVKAQTRLGTRLDLDTTPFA*PHLTSV
Trigger: AACACTGGTCAGATGTGGCAAAGCAAAGGGTGTTGT...GTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAACAACACCCTTTGCTTaGCCACATCTGACCAGTGTT +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGTTPFA*PHLTSV
Trigger: AACACTGGTCAGATGTGGCAAAGCAAAGGGTGTTGT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTLITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGATTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGLRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDLRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACCAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: EFQRVKAQTRLGTRLDLDQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...GTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RLDLDTAHIFCQWQSCLQACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...CTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: AQTRLGTRLDLDTAHIFCMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...ACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATCGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: DTAHIFCQWQSCLQMGMYRGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...ATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAAAAGCAAGAGGGTCCTaGTCTGCACCTCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRKARGS*SAPPCQ
Trigger: CTGACAAGGAGGTGCAGACAAGGACCCTCTTGCTTT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS TCA 90 bp GAGCCCATGCGTGCCTTCTCTTGTTGGTACACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGCCCTTTGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: EPMRAFSCWYTSLCC*VSVKVCPLLWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGACACTTACTCAGCAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGCATGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504571.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACGAAACTGCACTCGGGTaGATGGCTACAAAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: EFQRVKAQTRLGTRLDLDETALG*MATKSL
Trigger: TAAAGACTTTGTAGCCATCAACCCGAGTGCAGTTTC...GTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACATTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTLRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTCAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGNSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: LDTAHIFCQWQSCLQMGMVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...CATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGAGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACATCTCAAACACAGACTaGGTCTGGGATCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDISNTD*VWDLEL
Trigger: AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGAT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTATCTCAAACACAGACTaGGTCTGGGATCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: AQTRLGTRLDLDTAHIFCISNTD*VWDLEL
Trigger: AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGAT...ACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGAAACTGCACTCGGGTaGATGGCTACAAAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTETALG*MATKSL
Trigger: TAAAGACTTTGTAGCCATCAACCCGAGTGCAGTTTC...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000533801.6
CDS-3UTR CAA 90 bp GAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACATTCTGAAGATCAGCTaGGAGAATGCTTGCAACTTC +
Preference number: 5 (lower is better)
Translates to: EFQRVKAQTRLGTRLDLDILKIS*ENACNF
Trigger: GAAGTTGCAAGCATTCTCCAAGCTGATCTTCAGAAT...GTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAACAACACCCTTTGCTTaGCCACATCTGACCAGTGTT +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRTTPFA*PHLTSV
Trigger: AACACTGGTCAGATGTGGCAAAGCAAAGGGTGTTGT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRLRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATCAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: DTAHIFCQWQSCLQMGMYQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...ATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGATCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GCAGCCTTCAGAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: AAFRATASFTPSPVMATTACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...AGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTCTGAAGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCACATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAACTGACTGGGAAGTTTaGGAATACAATCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: FQRVKAQTRLGTRLDLDTTDWEV*EYNPRR
Trigger: TCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAGT...TGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACTTAATAATTTTCATCTaGTGCCTTGGGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RVKAQTRLGTRLDLDTAHLIIFI*CLGLAL
Trigger: CAGAGCTAGCCCAAGGCACAAGATGAAAATTATTAA...GTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACCTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: RVKAQTRLGTRLDLDTAHLYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...GTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp CCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCAAAATCTGCATGGCATaGAGAGGATTAGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: PKSEGADTAGHKTGLRHSKICMA*RGLGKF
Trigger: GAACTTTCCTAATCCTCTCAATGCCATGCAGATTTT...GCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCAAAATCTGCATGGCATaGAGAGGATTAGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: VKAQTRLGTRLDLDTAHIKICMA*RGLGKF
Trigger: GAACTTTCCTAATCCTCTCAATGCCATGCAGATTTT...GATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTATCTCAAACACAGACTaGGTCTGGGATCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTISNTD*VWDLEL
Trigger: AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGAT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS GCA 90 bp GAAAGGCAAACTGTATCACCTGGAACCAAGTCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGCACACAATGGCATTCTGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: ERQTVSPGTKSRASV*SNFPSRTQWHSGGT
Trigger: TGTGCCACCAGAATGCCATTGTGTGCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS GCA 90 bp GCCACATCTGACCAGTGTTCCCATAAAGGCAATGTTACTTCTCGATaGAAGATCTCCATTAGTTGCAGCTGGCTGAGGAGCTGTCACCTT +
Preference number: 5 (lower is better)
Translates to: ATSDQCSHKGNVTSR*KISISCSWLRSCHL
Trigger: AAGGTGACAGCTCCTCAGCCAGCTGCAACTAATGGAGATCTTGCATCGAGAAGTAACATTGCCTTTATGGGAACACTGGTCAGATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000510168.6
ENST00000513636.1
ENST00000513801.5
ENST00000533801.6
CDS CCA 90 bp GTCAGCAGGAACTCTATCCCCAACAGAAAGGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAGTGTATGCTCCAATTTTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: VSRNSIPNRKANCIT*NQVSGKCMLQFSFT
Trigger: CGTGAAGGAAAATTGGAGCATACACTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGCCTTTCTGTTGGGGATAGAGTTCCTGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGACAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: EFQRVKAQTRLGTRLDLDNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...GTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGATCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: RVPKSEGADTAGHKTGLRSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...TCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GCAGCCTTCAGAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTCATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: AAFRATASFTPSPVMATTHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...AGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTCTGAAGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACCAGACGACTGGCGATaGCAACTGCAGTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQPDDWR*QLQSPV
Trigger: CACAGGAGACTGCAGTTGCAATCGCCAGTCGTCTGG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAACTGACTGGGAAGTTTaGGAATACAATCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRTDWEV*EYNPRR
Trigger: TCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAGT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDLYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: VCRVPKSEGADTAGHKTGLYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...TCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGATGGTGCTAAGATGTaGTATGCAGAGTTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTDGAKM*YAEFQR
Trigger: TCTTTGGAACTCTGCATACAACATCTTAGCACCATC...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTAAGCAAATGTTCTCCTaGCTGTTTCCTCTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTKQMFS*LFPLLG
Trigger: ACCCAAAAGAGGAAACAGCAAGGAGAACATTTGCTT...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACCAGATGCCTAAAGATTaGTTTGTAGCTCGACAACTT +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDQMPKD*FVARQL
Trigger: AAGTTGTCGAGCTACAAACAAATCTTTAGGCATCTG...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS GCA 90 bp TTTGCAAACATCTGTACCAGTCTGGCCCATCGCAACTCCAATGTCTaGAGCCTTCAGAGCAACTGCATCATTTACTCCATCTCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: FANICTSLAHRNSNV*SLQSNCIIYSISCH
Trigger: ATGACAGGAGATGGAGTAAATGATGCAGTTGCTCTGAAGGCTGCAGACATTGGAGTTGCGATGGGCCAGACTGGTACAGATGTTTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000510774.1
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTCTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: EQLHHLLHLLSWLQLNRSLITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...AGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTTTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: VVCRVPKSEGADTAGHKTFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...AGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACCAGACGACTGGCGATaGCAACTGCAGTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGPDDWR*QLQSPV
Trigger: CACAGGAGACTGCAGTTGCAATCGCCAGTCGTCTGG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCCAGACGACTGGCGATaGCAACTGCAGTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYPDDWR*QLQSPV
Trigger: CACAGGAGACTGCAGTTGCAATCGCCAGTCGTCTGG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp GCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTCACTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: ADTAGHKTGLRHSSHLLSLYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...TGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAGATGGTGCTAAGATGTaGTATGCAGAGTTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRDGAKM*YAEFQR
Trigger: TCTTTGGAACTCTGCATACAACATCTTAGCACCATC...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACGTAAATTCCGATGGGTaGAATAAAGTTAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: YAEFQRVKAQTRLGTRLDVNSDG*NKVRSS
Trigger: TGATGACCTAACTTTATTCAACCCATCGGAATTTAC...GTCCAGTCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GCGCAGACACGGCTGGGCACAAGACTGGACTTAGACACAGCTCACATCTTCTGTGTAAATTCCGATGGGTaGAATAAAGTTAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: AQTRLGTRLDLDTAHIFCVNSDG*NKVRSS
Trigger: TGATGACCTAACTTTATTCAACCCATCGGAATTTAC...ACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTTGTGCCCAGCCGTGTCTGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS GCA 90 bp GTAGCTCGACAACTTCCCTCCTACAAACAAAGCAAATGTTCTCCTTaGTGTTTCCTCTTTTGGGTAGAGTTCCTGGTGAAACCAGACAGC +
Preference number: 5 (lower is better)
Translates to: VARQLPSYKQSKCSP*CFLFWVEFLVKPDS
Trigger: GCTGTCTGGTTTCACCAGGAACTCTACCCAAAAGAGGAAACAGCAAGGAGAACATTTGCTTTGTTTGTAGGAGGGAAGTTGTCGAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504381.5
ENST00000505330.5
ENST00000507488.6
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GCCTTCAGAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTGAATTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: AFRATASFTPSPVMATTELRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...TTCAGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTCTGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp CCTTCAGAGCAACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTGAACCAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: PSEQLHHLLHLLSWLQLNQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...GTTCAGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGTTGCTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGATTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACCAGACGACTGGCGATaGCAACTGCAGTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREPDDWR*QLQSPV
Trigger: CACAGGAGACTGCAGTTGCAATCGCCAGTCGTCTGG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQRGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGTGCTAAGATGTaGTATGCAGAGTTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: KTGLRHSSHLLSVAVLSPDGAKM*YAEFQR
Trigger: TCTTTGGAACTCTGCATACAACATCTTAGCACCATC...TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328560.12
ENST00000533801.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATCTGCAGAGGGGTTTTaGGTGCCTCTTCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGSAEGF*VPLLLA
Trigger: TGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAGA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATCTGCAGAGGGGTTTTaGGTGCCTCTTCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNESAEGF*VPLLLA
Trigger: TGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAGA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCTGCAGAGGGGTTTTaGGTGCCTCTTCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSAEGF*VPLLLA
Trigger: TGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCCAGACGACTGGCGATaGCAACTGCAGTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYPDDWR*QLQSPV
Trigger: CACAGGAGACTGCAGTTGCAATCGCCAGTCGTCTGG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTGTCCCATGATGGATCCAAGAACTGCATAGCAAAACATTCTATTACTGCAGAGCGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: LSHDGSKNCIAKHSITAERGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...CTCTGCAGTAATAGAATGTTTTGCTATGCAGTTCTTGGATCCATCATGGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNERGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGRGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp ATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGAGTAAATTCCGATGGGTaGAATAAAGTTAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: MLYAEFQRVKAQTRLGTRVNSDG*NKVRSS
Trigger: TGATGACCTAACTTTATTCAACCCATCGGAATTTAC...TCTTGTGCCCAGCCGTGTCTGCGCCTTCACTCTTTGGAACTCTGCATACAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAACAACACCCTTTGCTTaGCCACATCTGACCAGTGTT +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQTTPFA*PHLTSV
Trigger: AACACTGGTCAGATGTGGCAAAGCAAAGGGTGTTGT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATCTGCAGAGGGGTTTTaGGTGCCTCTTCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRESAEGF*VPLLLA
Trigger: TGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAGA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCCAGACGACTGGCGATaGCAACTGCAGTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFPDDWR*QLQSPV
Trigger: CACAGGAGACTGCAGTTGCAATCGCCAGTCGTCTGG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRERGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp ATGCTGTCTTTCCAGTTGCGAGGAGGTTTACGAATGACATCTTTATCCACTGGTATCTCAAACACAGACTaGGTCTGGGATCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: MLSFQLRGGLRMTSLSTGISNTD*VWDLEL
Trigger: AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGAT...ACCAGTGGATAAAGATGTCATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAACCCTAGAACACCACTaGATAGCCCTGCATGAATTC +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQTLEHH*IALHEF
Trigger: GAATTCATGCAGGGCTATCAAGTGGTGTTCTAGGGT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATACAACACCCTTTGCTTaGCCACATCTGACCAGTGTT +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYTTPFA*PHLTSV
Trigger: AACACTGGTCAGATGTGGCAAAGCAAAGGGTGTTGT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACAACACCCTTTGCTTaGCCACATCTGACCAGTGTT +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGTTPFA*PHLTSV
Trigger: AACACTGGTCAGATGTGGCAAAGCAAAGGGTGTTGT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCTGCAGAGGGGTTTTaGGTGCCTCTTCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILSAEGF*VPLLLA
Trigger: TGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAGA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp CATTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: HLLHLLSWLQLNRSSVATNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...AGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSLITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRELITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAACTGCATCATTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTTCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: QLHHLLHLLSWLQLNRSSSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...AGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAATGATGCAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp CCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAATAATTAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: PSPVMATTEPFFCSDLIINSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...AATTATTAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQNSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp ATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAATAATTTTCATCTTGTGCGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: MATTEPFFCSDLIIFILCVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...GCACAAGATGAAAATTATTAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CATTTACTCCATCTCCTGTCATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTTAATAATTTTCATCTaGTGCCTTGGGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: HLLHLLSWLQLNRSSVATLIIFI*CLGLAL
Trigger: CAGAGCTAGCCCAAGGCACAAGATGAAAATTATTAA...AGTCGCTACAGAAGAACGGTTCAGTTGTAGCCATGACAGGAGATGGAGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYRGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALRGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAAAGCAAGAGGGTCCTaGTCTGCACCTCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALKARGS*SAPPCQ
Trigger: CTGACAAGGAGGTGCAGACAAGGACCCTCTTGCTTT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505330.5
CDS TCA 90 bp ACAACGATAAGTATTGCCACAGTGATACTGACGGCATCATCAAACTaGTGCATTAAAACACTGATGACTGCAGAAGCCAGAAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: TTISIATVILTASSN*CIKTLMTAEARSSI
Trigger: TATGCTGCTTCTGGCTTCTGCAGTCATCAGTGTTTTAATGCATCAGTTTGATGATGCCGTCAGTATCACTGTGGCAATACTTATCGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505072.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGAAACTGCACTCGGGTaGATGGCTACAAAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYETALG*MATKSL
Trigger: TAAAGACTTTGTAGCCATCAACCCGAGTGCAGTTTC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428331.6
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTACAACACCCTTTGCTTaGCCACATCTGACCAGTGTT +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSTTPFA*PHLTSV
Trigger: AACACTGGTCAGATGTGGCAAAGCAAAGGGTGTTGT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTCTGCAGAGGGGTTTTaGGTGCCTCTTCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSAEGF*VPLLLA
Trigger: TGCAAGCAGAAGAGGCACCAAAAACCCCTCTGCAGA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATCTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYLITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALLITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRELRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNENSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYNSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGCGTGCCTTCTCTTGTaGGTACACATCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFACLLL*VHISLL
Trigger: CAGCAGAGAGATGTGTACCAACAAGAGAAGGCACGC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACTGACTGGGAAGTTTaGGAATACAATCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGTDWEV*EYNPRR
Trigger: TCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAGT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAACTGACTGGGAAGTTTaGGAATACAATCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNETDWEV*EYNPRR
Trigger: TCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAGT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCGAGGTGTAATCACATaGTCTCGTAGCTCACGCCAG +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFRGVIT*SRSSRQ
Trigger: CTGGCGTGAGCTACGAGACAATGTGATTACACCTCG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAATCTCAAACACAGACTaGGTCTGGGATCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEISNTD*VWDLEL
Trigger: AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGAT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATCTCAAACACAGACTaGGTCTGGGATCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGISNTD*VWDLEL
Trigger: AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGAT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATACAACACCCTTTGCTTaGCCACATCTGACCAGTGTT +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYTTPFA*PHLTSV
Trigger: AACACTGGTCAGATGTGGCAAAGCAAAGGGTGTTGT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACAACACCCTTTGCTTaGCCACATCTGACCAGTGTT +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTTPFA*PHLTSV
Trigger: AACACTGGTCAGATGTGGCAAAGCAAAGGGTGTTGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCTAATTACAGCATCATaGCACACACAGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLITAS*HTQPAS
Trigger: TGAGGCGGGCTGTGTGTGCAATGATGCTGTAATTAG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYLRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALLRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTACAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTACAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNESDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSNSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRENSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGTCAAGGTCTGCCCTTaGCTCTGGTATGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFVKVCP*LWYVVQ
Trigger: CTGTACTACATACCAGAGCAAAGGGCAGACCTTGAC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCATGCGTGCCTTCTCTaGTTGGTACACATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFHACLL*LVHISL
Trigger: CAGAGAGATGTGTACCAACAAGAGAAGGCACGCATG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTACTGACTGGGAAGTTTaGGAATACAATCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSTDWEV*EYNPRR
Trigger: TCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAGT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAACTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQLYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAAAAAATCTGCATGGCATaGAGAGGATTAGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQKICMA*RGLGKF
Trigger: GAACTTTCCTAATCCTCTCAATGCCATGCAGATTTT...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TATCAAGTTTTTAGTCAAAATGCTGTCTTTCCAGTTGCGAGGAGGTTTACGAATATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: YQVFSQNAVFPVARRFTNMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...ATTCGTAAACCTCCTCGCAACTGGAAAGACAGCATTTTGACTAAAAACTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTATCTCAAACACAGACTaGGTCTGGGATCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSISNTD*VWDLEL
Trigger: AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGAT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATGGTTCATAAACCATTaGTTTGGGTTTGGGGACTTT +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQWFINH*FGFGDF
Trigger: AAAGTCCCCAAACCCAAACAAATGGTTTATGAACCA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS GCA 90 bp TCCCAGAGCCAGACTTCAAGAAAAGATGATGATGTCGAACTAACATaGTTCTGGATCTTTTCCCTGCTCCTTTCAACCTTCTTTATAATT +
Preference number: 5 (lower is better)
Translates to: SQSQTSRKDDDVELT*FWIFSLLLSTFFII
Trigger: AATTATAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTCGACATCATCATCTTTTCTTGAAGTCTGGCTCTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359644.7
ENST00000504381.5
ENST00000504612.5
CDS CCA 90 bp AGCCAGACTTCAAGAAAAGATGATGATGTCGAACTAACATGCTTCTaGATCTTTTCCCTGCTCCTTTCAACCTTCTTTATAATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SQTSRKDDDVELTCF*IFSLLLSTFFIISA
Trigger: GGCAGAAATTATAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTCGACATCATCATCTTTTCTTGAAGTCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359644.7
ENST00000504381.5
ENST00000504612.5
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGAAACTGCACTCGGGTaGATGGCTACAAAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALETALG*MATKSL
Trigger: TAAAGACTTTGTAGCCATCAACCCGAGTGCAGTTTC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428331.6
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTTAAGGCCCCTTCTGTaGGCTTCCCCATTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLRPLL*ASPLEY
Trigger: ATACTCTAATGGGGAAGCCAACAGAAGGGGCCTTAA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCAAGACCCATCTTCATaGCAAGAGCAATTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFQDPSS*QEQLRP
Trigger: GGGCCTTAATTGCTCTTGCAATGAAGATGGGTCTTG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATTTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYNSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILNSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATACTGACTGGGAAGTTTaGGAATACAATCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYTDWEV*EYNPRR
Trigger: TCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAGT...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAACTGACTGGGAAGTTTaGGAATACAATCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILTDWEV*EYNPRR
Trigger: TCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAGT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAACTGACTGGGAAGTTTaGGAATACAATCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALTDWEV*EYNPRR
Trigger: TCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAGT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAATTAATAATTTTCATCTaGTGCCTTGGGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELIIFI*CLGLAL
Trigger: CAGAGCTAGCCCAAGGCACAAGATGAAAATTATTAA...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGATTAATAATTTTCATCTaGTGCCTTGGGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGLIIFI*CLGLAL
Trigger: CAGAGCTAGCCCAAGGCACAAGATGAAAATTATTAA...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCATGTCTGCTGCCTCTTaGCAAACATCTGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFMSAAS*QTSVPV
Trigger: GACTGGTACAGATGTTTGCAAAGAGGCAGCAGACAT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNELYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGCCAGCTCCTTACACTCAACTGCCTCAGTAACAATGACTCAAAGAATAGATATCTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: SQLLTLNCLSNNDSKNRYLYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...ATATCTATTCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAAATCTGCATGGCATaGAGAGGATTAGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGKICMA*RGLGKF
Trigger: GAACTTTCCTAATCCTCTCAATGCCATGCAGATTTT...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAAAAAATCTGCATGGCATaGAGAGGATTAGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEKICMA*RGLGKF
Trigger: GAACTTTCCTAATCCTCTCAATGCCATGCAGATTTT...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCATGCTGTCTTTCCAGTaGCGAGGAGGTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFMLSFQ*RGGLRM
Trigger: CATTCGTAAACCTCCTCGCAACTGGAAAGACAGCAT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAATCTCAAACACAGACTaGGTCTGGGATCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILISNTD*VWDLEL
Trigger: AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGAT...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAATCTCAAACACAGACTaGGTCTGGGATCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALISNTD*VWDLEL
Trigger: AAGTTCCAGATCCCAGACCAAGTCTGTGTTTGAGAT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAGATGGTGCTAAGATGTaGTATGCAGAGTTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREDGAKM*YAEFQR
Trigger: TCTTTGGAACTCTGCATACAACATCTTAGCACCATC...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCACCCTAGAACACCACTaGATAGCCCTGCATGAATTC +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFTLEHH*IALHEF
Trigger: GAATTCATGCAGGGCTATCAAGTGGTGTTCTAGGGT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp CCTCTTGAACTTGCCCTTCTAAATGATCCTCAGACTGCAATTCCTAGTTTGCAATCACTAATGATAGAGTaGATTAGACAATGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: PLELALLNDPQTAIPSLQSLMIE*IRQWLP
Trigger: TGGAAGCCATTGTCTAATCAACTCTATCATTAGTGA...TTGCAAACTAGGAATTGCAGTCTGAGGATCATTTAGAAGGGCAAGTTCAAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAAGCAAATGTTCTCCTaGCTGTTTCCTCTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREKQMFS*LFPLLG
Trigger: ACCCAAAAGAGGAAACAGCAAGGAGAACATTTGCTT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR CAA 90 bp CAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGACAGATGCCTAAAGATTaGTTTGTAGCTCGACAACTT +
Preference number: 5 (lower is better)
Translates to: QTCLWSGSRPVEKILFQGQMPKD*FVARQL
Trigger: AAGTTGTCGAGCTACAAACAAATCTTTAGGCATCTG...TCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504381.5
ENST00000507488.6
CDS-3UTR CAA 90 bp AAACTGATGGCATTACACACAAAATCCACCTATTTCCCTAGCATGCCCAATGAACAGATGCCTAAAGATTaGTTTGTAGCTCGACAACTT +
Preference number: 5 (lower is better)
Translates to: KLMALHTKSTYFPSMPNEQMPKD*FVARQL
Trigger: AAGTTGTCGAGCTACAAACAAATCTTTAGGCATCTG...TTCATTGGGCATGCTAGGGAAATAGGTGGATTTTGTGTGTAATGCCATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505330.5
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRENHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALSDVVL*KSIKTH
Trigger: ATGGGTCTTGATGGACTTCAACAAGACTACATCAGA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp ATGGCTACAACTGAACCGTTCTTCTGTAGCGACTTAATAATTTTCATCTTGTGCTTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: MATTEPFFCSDLIIFILCFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...GCACAAGATGAAAATTATTAAGTCGCTACAGAAGAACGGTTCAGTTGTAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFNSHPL*LRAKRV
Trigger: TACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCACTGACTGGGAAGTTTaGGAATACAATCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFTDWEV*EYNPRR
Trigger: TCGTCTGGGATTGTATTCCAAAACTTCCCAGTCAGT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCGCTGCTGAACATCCATaGCATCTATTTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFAAEHP*HLFLLL
Trigger: CAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGC...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAATTAATAATTTTCATCTaGTGCCTTGGGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRELIIFI*CLGLAL
Trigger: CAGAGCTAGCCCAAGGCACAAGATGAAAATTATTAA...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTTAATAATTTTCATCTaGTGCCTTGGGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSLIIFI*CLGLAL
Trigger: CAGAGCTAGCCCAAGGCACAAGATGAAAATTATTAA...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTCTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSLYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAACTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFRELYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTTTTAGTCAAAATGCTGTCTTTCCAGTTGCGAGGAGGTTTACGAATGACATCTCTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: FLVKMLSFQLRGGLRMTSLYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...AGATGTCATTCGTAAACCTCCTCGCAACTGGAAAGACAGCATTTTGACTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507194.1
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAAAAATCTGCATGGCATaGAGAGGATTAGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREKICMA*RGLGKF
Trigger: GAACTTTCCTAATCCTCTCAATGCCATGCAGATTTT...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp GAATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTAAAATCTGCATGGCATaGAGAGGATTAGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: EFKCRHVYGQVVDQWKRSKICMA*RGLGKF
Trigger: GAACTTTCCTAATCCTCTCAATGCCATGCAGATTTT...AGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTAGATGGTGCTAAGATGTaGTATGCAGAGTTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILDGAKM*YAEFQR
Trigger: TCTTTGGAACTCTGCATACAACATCTTAGCACCATC...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS CCA 90 bp CATCATACTTCAAGAAAAGATGATGATGTCGAACTAACATGCTTCTaGATCTTTTCCCTGCTCCTTTCAACCTTCTTTATAATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HHTSRKDDDVELTCF*IFSLLLSTFFIISA
Trigger: GGCAGAAATTATAAAGAAGGTTGAAAGGAGCAGGGAAAAGATCCAGAAGCATGTTAGTTCGACATCATCATCTTTTCTTGAAGTATGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
ENST00000514654.5
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp ATTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACC +
Preference number: 5 (lower is better)
Translates to: IQMQTCLWSGSRPVEKILFSDVV*LKSIKT
Trigger: GGTCTTGATGGACTTCAACAAGACTACATCAGAAAA...TAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCAAATGCAGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTAATAATTTTCATCTaGTGCCTTGGGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: FKCRHVYGQVVDQWKRSYLIIFI*CLGLAL
Trigger: CAGAGCTAGCCCAAGGCACAAGATGAAAATTATTAA...ATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCTGCATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTATTAATAATTTTCATCTaGTGCCTTGGGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALLIIFI*CLGLAL
Trigger: CAGAGCTAGCCCAAGGCACAAGATGAAAATTATTAA...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp TTCCATGTTCCATCTAACGACATGGAACAATGTACATTTGACAATTCAGCCTTAAAAATCTGCATGGCATaGAGAGGATTAGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: FHVPSNDMEQCTFDNSALKICMA*RGLGKF
Trigger: GAACTTTCCTAATCCTCTCAATGCCATGCAGATTTT...TAAGGCTGAATTGTCAAATGTACATTGTTCCATGTCGTTAGATGGAACATGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AGACATGTTTATGGTCAGGTAGTAGACCAGTGGAAAAGATCTTATTTCAGGGAAGTAAATTCCGATGGGTaGAATAAAGTTAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: RHVYGQVVDQWKRSYFREVNSDG*NKVRSS
Trigger: TGATGACCTAACTTTATTCAACCCATCGGAATTTAC...TTCCCTGAAATAAGATCTTTTCCACTGGTCTACTACCTGACCATAAACATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAAGCAAATGTTCTCCTaGCTGTTTCCTCTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFKQMFS*LFPLLG
Trigger: ACCCAAAAGAGGAAACAGCAAGGAGAACATTTGCTT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505330.5
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAATCACTTCCCCAAATaGATTATAGCCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFNHFPK*IIANSS
Trigger: ACTGGAGTTGGCTATAATCAATTTGGGGAAGTGATT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTTAATAATTTTCATCTaGTGCCTTGGGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLIIFI*CLGLAL
Trigger: CAGAGCTAGCCCAAGGCACAAGATGAAAATTATTAA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCCTTTACCCTCTTCGATaGCAGACATTATGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFLYPLR*QTLWFE
Trigger: TTCAAACCATAATGTCTGCAATCGAAGAGGGTAAAG...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCAAAATCTGCATGGCATaGAGAGGATTAGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFKICMA*RGLGKF
Trigger: GAACTTTCCTAATCCTCTCAATGCCATGCAGATTTT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCACCATTTGTTTGGGTTaGGGGACTTTTTATTCTAAG +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFTICLG*GTFYSK
Trigger: CTTAGAATAAAAAGTCCCCAAACCCAAACAAATGGT...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS-3UTR CAA 90 bp AAGATAGATAGTGTATTTGTACTGTTAGACTTCTTTAAGTGCAGAAGGTGGTTCTCACTAATGATAGAGTaGATTAGACAATGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: KIDSVFVLLDFFKCRRWFSLMIE*IRQWLP
Trigger: TGGAAGCCATTGTCTAATCAACTCTATCATTAGTGA...GAACCACCTTCTGCACTTAAAGAAGTCTAACAGTACAAATACACTATCTATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428331.6
ENST00000504948.5
ENST00000505330.5
ENST00000508532.5
ENST00000510168.6
CDS GCA 72 bp GAGCTGCTCGCGGGGCAGCGGTGCGAGGCGGGAGCCTaGTCCCGGCGTGAGAAGAAGCGAGCGGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: ELLAGQRCEAGA*SRREKKRAGGR
Trigger: CCTCCCTCCCGCTCGCTTCTTCTCACGCCGGGAGCAGGCTCCCGCCTCGCACCGCTGCCCCGCGAGCAGCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000504948.5
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS GCA 72 bp GCCTCGGGAGAAGAGGAGCTGCTCGCGGGGCAGCGGTaGGAGGCGGGAGCCTGCTCCCGGCGTGAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: ASGEEELLAGQR*EAGACSRREKK
Trigger: CTTCTTCTCACGCCGGGAGCAGGCTCCCGCCTCGCACCGCTGCCCCGCGAGCAGCTCCTCTTCTCCCGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000504948.5
ENST00000505072.5
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS CCA 72 bp CTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATaGGGATGTATCTCAACCAGCTGCTGTCCACTCCTC +
Preference number: 6 (lower is better)
Translates to: LTSSVSGSPVSR*GCISTSCCPLL
Trigger: GAGGAGTGGACAGCAGCTGGTTGAGATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS TCA 72 bp TGCAACCTTCATTTTCCATCGAAACTGCACTCGGGTTaGTGGCTACAAAGTCCAAAGCCCCGGACAGCCCTC +
Preference number: 6 (lower is better)
Translates to: CNLHFPSKLHSG*WLQSPKPRTAL
Trigger: GAGGGCTGTCCGGGGCTTTGGACTTTGTAGCCATCAACCCGAGTGCAGTTTCGATGGAAAATGAAGGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505072.5
CDS CAA 72 bp GTGCAACCTTCATTTTCCATCGAAACTGCACTCGGGTaGATGGCTACAAAGTCCAAAGCCCCGGACAGCCCT +
Preference number: 6 (lower is better)
Translates to: VQPSFSIETALG*MATKSKAPDSP
Trigger: AGGGCTGTCCGGGGCTTTGGACTTTGTAGCCATCAACCCGAGTGCAGTTTCGATGGAAAATGAAGGTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505072.5
CDS CCA 72 bp GTTGCGAGGAGGTTTACGAATGACATCTTTATCCACTaGTTCTACTCCAAGGCTCTGAGCTGGGGGTCCATC +
Preference number: 6 (lower is better)
Translates to: VARRFTNDIFIH*FYSKALSWGSI
Trigger: GATGGACCCCCAGCTCAGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTCATTCGTAAACCTCCTCGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507194.1
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS TCA 72 bp CGTGCCTTCTCTTGTTGGTACACATCTCTCTGCTGCTaGGTAAGTGTCAAGGTCTGCCCTTTGCTCTGGTAT +
Preference number: 6 (lower is better)
Translates to: RAFSCWYTSLCC*VSVKVCPLLWY
Trigger: ATACCAGAGCAAAGGGCAGACCTTGACACTTACTCAGCAGCAGAGAGATGTGTACCAACAAGAGAAGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504571.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS CCA 72 bp AGACTGGACTTAGACACAGCTCACATCTTCTGTCAGTaGCAGTCCTGTCTCCAGATGGGGATGTATCTCAAC +
Preference number: 6 (lower is better)
Translates to: RLDLDTAHIFCQ*QSCLQMGMYLN
Trigger: GTTGAGATACATCCCCATCTGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTCTAAGTCCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000504381.5
ENST00000504612.5
ENST00000507488.6
ENST00000513801.5
ENST00000533801.6
CDS CAA 72 bp GTGCAACCTTCATTTTCCATCGAAACTGCACTCGGGTaGATGGCTACAAAGTCTTTAGTGTCAGCCACGGCC +
Preference number: 6 (lower is better)
Translates to: VQPSFSIETALG*MATKSLVSATA
Trigger: GGCCGTGGCTGACACTAAAGACTTTGTAGCCATCAACCCGAGTGCAGTTTCGATGGAAAATGAAGGTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000508532.5
ENST00000509662.5
ENST00000510168.6
ENST00000533801.6
CDS CCA 72 bp AAGGCGTTGTCTCACCTGTCAAGCTGGACTCATCAATaGAAAGATCCACAGCCTCAAACAAGCGTAAGTCAG +
Preference number: 6 (lower is better)
Translates to: KALSHLSSWTHQ*KDPQPQTSVSQ
Trigger: CTGACTTACGCTTGTTTGAGGCTGTGGATCTTTCCATTGATGAGTCCAGCTTGACAGGTGAGACAACGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS CAA 90 bp TTTGAAAACGTGCAACCTTCATTTTCCATCGAAACTGCACTCGGGTaGATGGCTACAAAGTCTTTAGTGTCAGCCACGGCCACACTGGGA +
Preference number: 6 (lower is better)
Translates to: FENVQPSFSIETALG*MATKSLVSATATLG
Trigger: TCCCAGTGTGGCCGTGGCTGACACTAAAGACTTTGTAGCCATCAACCCGAGTGCAGTTTCGATGGAAAATGAAGGTTGCACGTTTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000509662.5
ENST00000510168.6
ENST00000533801.6
CDS CAA 90 bp TTTGAAAACGTGCAACCTTCATTTTCCATCGAAACTGCACTCGGGTaGATGGCTACAAAGTCTTTAGTGTCAGCCACGGCCACACCAAAG +
Preference number: 6 (lower is better)
Translates to: FENVQPSFSIETALG*MATKSLVSATATPK
Trigger: CTTTGGTGTGGCCGTGGCTGACACTAAAGACTTTGTAGCCATCAACCCGAGTGCAGTTTCGATGGAAAATGAAGGTTGCACGTTTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508532.5
CDS GCA 72 bp ACTGTATCACCTGGAACCAAGTCTCGGGCAAGTGTATaGTCCAATTTTCCTTCACGCACACAATGGCATTCT +
Preference number: 6 (lower is better)
Translates to: TVSPGTKSRASV*SNFPSRTQWHS
Trigger: AGAATGCCATTGTGTGCGTGAAGGAAAATTGGAGCATACACTTGCCCGAGACTTGGTTCCAGGTGATACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS CAA 72 bp GCCTGGATTTGTATCCCTGGCTTCACCATCTCTTACTaGTGTGATCCTGGGCTACTTACTAATCTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: AWICIPGFTISY*CDPGLLTNLAL
Trigger: CAGAGCTAGATTAGTAAGTAGCCCAGGATCACACAAGTAAGAGATGGTGAAGCCAGGGATACAAATCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514654.5
CDS CAA 90 bp TGTAGCTCGACAACTTCCCTCCTACAAACAAAGCAAATGTTCTCCTaGCTGTTTCCTCTTTTGGGTAGAGTTCCTGGTGAAACCAGACAG +
Preference number: 6 (lower is better)
Translates to: CSSTTSLLQTKQMFS*LFPLLGRVPGETRQ
Trigger: CTGTCTGGTTTCACCAGGAACTCTACCCAAAAGAGGAAACAGCAAGGAGAACATTTGCTTTGTTTGTAGGAGGGAAGTTGTCGAGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504381.5
ENST00000505330.5
ENST00000507488.6
CDS GCA 72 bp TTTGAGGAAAAATCTGTTCTCCCTCCTACCAACCACTaGAGGACTTCATTACCATCAGCTGCTCTCTCACTT +
Preference number: 6 (lower is better)
Translates to: FEEKSVLPPTNH*RTSLPSAALSL
Trigger: AAGTGAGAGAGCAGCTGATGGTAATGAAGTCCTGCAGTGGTTGGTAGGAGGGAGAACAGATTTTTCCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515854.5
CDS CCA 72 bp AACTCTATCCCCAACAGAAAGGCAAACTGTATCACCTaGAACCAAGTCTCGGGCAAGTGTATGCTCCAATTT +
Preference number: 6 (lower is better)
Translates to: NSIPNRKANCIT*NQVSGKCMLQF
Trigger: AAATTGGAGCATACACTTGCCCGAGACTTGGTTCCAGGTGATACAGTTTGCCTTTCTGTTGGGGATAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS CAA 90 bp TCTGTCCTGCTGTGTTCGGTGTACACACTTAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTATTCAGCTTTTCTGATGTAGTCTTG +
Preference number: 6 (lower is better)
Translates to: SVLLCSVYTLNSHPL*LRAKRVFSFSDVVL
Trigger: CAAGACTACATCAGAAAAGCTGAATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTTAAGTGTGTACACCGAACACAGCAGGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504571.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS CAA 90 bp GATGGAGGCAACAGACTATCCATAGTGAGGAAAGCAAGAGGGTCCTaGTCTGCACCTCCTTGTCAGCAACCATATGAAATTAGAAACTTA +
Preference number: 6 (lower is better)
Translates to: DGGNRLSIVRKARGS*SAPPCQQPYEIRNL
Trigger: TAAGTTTCTAATTTCATATGGTTGCTGACAAGGAGGTGCAGACAAGGACCCTCTTGCTTTCCTCACTATGGATAGTCTGTTGCCTCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504381.5
ENST00000505330.5
ENST00000507488.6
CDS TCA 72 bp AAATGCTGTCTTTCCAGTTGCGAGGAGGTTTACGAATaGCATCTTTATCCACTGGTTCTACTCCAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: KCCLSSCEEVYE*HLYPLVLLQGS
Trigger: AGAGCCTTGGAGTAGAACCAGTGGATAAAGATGTCATTCGTAAACCTCCTCGCAACTGGAAAGACAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507194.1
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS TCA 72 bp AGTATTGCCACAGTGATACTGACGGCATCATCAAACTaGTGCATTAAAACACTGATGACTGCAGAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: SIATVILTASSN*CIKTLMTAEAR
Trigger: TCTGGCTTCTGCAGTCATCAGTGTTTTAATGCATCAGTTTGATGATGCCGTCAGTATCACTGTGGCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505072.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000510168.6
ENST00000513801.5
ENST00000533801.6
CDS CAA 72 bp CTGTGTTCGGTGTACACACTTAACAGCCATCCACTTTaGCTCAGAGCTAAAAGGGTATTCAGCTTTTCTGAT +
Preference number: 6 (lower is better)
Translates to: LCSVYTLNSHPL*LRAKRVFSFSD
Trigger: ATCAGAAAAGCTGAATACCCTTTTAGCTCTGAGCAAAAGTGGATGGCTGTTAAGTGTGTACACCGAACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504571.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS CAA 72 bp CTTCTACATATGTGGGGATTTGGCTTTGTGAAACACTaGCTGCAAGAGAATCTGTTCTTCGGCTCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: LLHMWGFGFVKH*LQENLFFGSLV
Trigger: AACCAAAGAGCCGAAGAACAGATTCTCTTGCAGCAAGTGTTTCACAAAGCCAAATCCCCACATATGTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509150.1
CDS CAA 72 bp GCTAAAAGGGTATTCAGCTTTTCTGATGTAGTCTTGTaGAAGTCCATCAAGACCCATCTTCATTGCAAGAGC +
Preference number: 6 (lower is better)
Translates to: AKRVFSFSDVVL*KSIKTHLHCKS
Trigger: GCTCTTGCAATGAAGATGGGTCTTGATGGACTTCAACAAGACTACATCAGAAAAGCTGAATACCCTTTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504571.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS CAA 90 bp CAAGGTCTGCCCTTTGCTCTGGTATGTAGTACAGTACTTAATTACTaGTTCGTAAGCACCTTTCATAAAACAAATCTCTGGTCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: QGLPFALVCSTVLNY*FVSTFHKTNLWSVL
Trigger: CAGGACAGACCAGAGATTTGTTTTATGAAAGGTGCTTACGAACAAGTAATTAAGTACTGTACTACATACCAGAGCAAAGGGCAGACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504571.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS TCA 72 bp CGGTGCCCAGCTAGAACACAAAATTTTCACATTGAATaGAAAGCACGCTATTTCTCCACCAACATAAGAGTA +
Preference number: 6 (lower is better)
Translates to: RCPARTQNFHIE*KARYFSTNIRV
Trigger: TACTCTTATGTTGGTGGAGAAATAGCGTGCTTTTCATTCAATGTGAAAATTTTGTGTTCTAGCTGGGCACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508297.2
CDS GCA 72 bp TTTCATCTTGTGCCTTGGGCTAGCTCTGTAAAATACTaGAACCTGTTAAAATACAAGATACACTCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: FHLVPWASSVKY*NLLKYKIHSES
Trigger: GGACTCAGAGTGTATCTTGTATTTTAACAGGTTGCAGTATTTTACAGAGCTAGCCCAAGGCACAAGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504571.5
CDS CAA 72 bp AGAGCTAAAAGGGTATTCAGCTTTTCTGATGTAGTCTaGTTGAAGTCCATCAAGACCCATCTTCATTGCAAG +
Preference number: 6 (lower is better)
Translates to: RAKRVFSFSDVV*LKSIKTHLHCK
Trigger: CTTGCAATGAAGATGGGTCTTGATGGACTTCAACAAGACTACATCAGAAAAGCTGAATACCCTTTTAGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504571.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS TCA 72 bp AATACTGCAACCTTTGGTACTATTTGTGAAAGCTGCTaGACATCCATTGCATCTATTTCTTCTCCTGAGACT +
Preference number: 6 (lower is better)
Translates to: NTATFGTICESC*TSIASISSPET
Trigger: AGTCTCAGGAGAAGAAATAGATGCAATGGATGTTCAGCAGCTTTCACAAATAGTACCAAAGGTTGCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000510774.1
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS TCA 72 bp AGCTCTGTAAAATACTGCAACCTTTGGTACTATTTGTaGAAGCTGCTGAACATCCATTGCATCTATTTCTTC +
Preference number: 6 (lower is better)
Translates to: SSVKYCNLWYYL*KLLNIHCIYFF
Trigger: GAAGAAATAGATGCAATGGATGTTCAGCAGCTTTCACAAATAGTACCAAAGGTTGCAGTATTTTACAGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000510774.1
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS TCA 72 bp TCTACTTTTCATATAATTTATCCAGAAGACCCATGGTaGCAAATTTCTTGCAAACTTACGTGCTCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: STFHIIYPEDPW*QISCKLTCSAG
Trigger: TCCAGCTGAGCACGTAAGTTTGCAAGAAATTTGTCACCATGGGTCTTCTGGATAAATTATATGAAAAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510774.1
CDS CAA 72 bp CCCTTTGCTCTGGTATGTAGTACAGTACTTAATTACTaGTTCGTAAGCACCTTTCATAAAACAAATCTCTGG +
Preference number: 6 (lower is better)
Translates to: PFALVCSTVLNY*FVSTFHKTNLW
Trigger: CCAGAGATTTGTTTTATGAAAGGTGCTTACGAACAAGTAATTAAGTACTGTACTACATACCAGAGCAAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000328560.12
ENST00000359644.7
ENST00000422190.6
ENST00000428331.6
ENST00000504381.5
ENST00000504571.5
ENST00000504612.5
ENST00000504948.5
ENST00000505330.5
ENST00000507488.6
ENST00000508532.5
ENST00000508660.5
ENST00000510168.6
ENST00000513801.5
ENST00000514654.5
ENST00000533801.6
CDS CAA 72 bp ATTAGAAACTTAGCAATTCCTCAGATGCCTAAAGATTaGTTTGTAGCTCGACAACTTCCCTCCTACAAACAA +
Preference number: 6 (lower is better)
Translates to: IRNLAIPQMPKD*FVARQLPSYKQ
Trigger: TTGTTTGTAGGAGGGAAGTTGTCGAGCTACAAACAAATCTTTAGGCATCTGAGGAATTGCTAAGTTTCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504381.5
ENST00000505330.5
ENST00000507488.6
CDS CAA 72 bp TATAATTTATCCAGAAGACCCATGGTGACAAATTTCTaGCAAACTTACGTGCTCAGCTGGAATCTAACGAAA +
Preference number: 6 (lower is better)
Translates to: YNLSRRPMVTNF*QTYVLSWNLTK
Trigger: TTTCGTTAGATTCCAGCTGAGCACGTAAGTTTGCAAGAAATTTGTCACCATGGGTCTTCTGGATAAATTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510774.1
CDS TCA 72 bp CATGCAATGGAGTATTACTTTAGCCACAAAAAGGAATaGAGTACTAACACATGCTACAACATGAATAAACCT +
Preference number: 6 (lower is better)
Translates to: HAMEYYFSHKKE*STNTCYNMNKP
Trigger: AGGTTTATTCATGTTGTAGCATGTGTTAGTACTTCATTCCTTTTTGTGGCTAAAGTAATACTCCATTGCATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514654.5
CDS CCA 72 bp CTTCTGAACTATTTATGTAGCGATGTTATACTCTTATaGGCTCCATGTAATACTGATCTCCATAATAAAACG +
Preference number: 6 (lower is better)
Translates to: LLNYLCSDVILL*APCNTDLHNKT
Trigger: CGTTTTATTATGGAGATCAGTATTACATGGAGCCCATAAGAGTATAACATCGCTACATAAATAGTTCAGAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513636.1