RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2B3 (Homo sapiens)

Ensembl gene IDs: ENSG00000067842

Ensembl transcript IDs: ENST00000263519.4, ENST00000263519.5, ENST00000349466.6, ENST00000359149.7, ENST00000359149.8, ENST00000370186.5, ENST00000393842.5, ENST00000683064.1, ENST00000684004.1

Found 714 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTAGTTTTTGCAGAGGGCGGGTTGCTTTGTGGCTGCAGGGCCGCTTaGAGGCGGCTCCCTCAGGTGGCACCCTTCACAGGCCTGCAGAGC +
Preference number: 1 (lower is better)
Translates to: LVFAEGGLLCGCRAA*RRLPQVAPFTGLQS
Trigger: GCTCTGCAGGCCTGTGAAGGGTGCCACCTGAGGGAGCCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAAAACTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 90 bp CGCACTGCGGATGTGCCTAGTTTTTGCAGAGGGCGGGTTGCTTTGTaGCTGCAGGGCCGCTTGCAGGCGGCTCCCTCAGGTGGCACCCTT +
Preference number: 1 (lower is better)
Translates to: RTADVPSFCRGRVAL*LQGRLQAAPSGGTL
Trigger: AAGGGTGCCACCTGAGGGAGCCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAAAACTAGGCACATCCGCAGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 90 bp CTGCGGATGTGCCTAGTTTTTGCAGAGGGCGGGTTGCTTTGTGGCTaGAGGGCCGCTTGCAGGCGGCTCCCTCAGGTGGCACCCTTCACA +
Preference number: 1 (lower is better)
Translates to: LRMCLVFAEGGLLCG*RAACRRLPQVAPFT
Trigger: TGTGAAGGGTGCCACCTGAGGGAGCCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAAAACTAGGCACATCCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 90 bp CCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTaGGCAGGACCCACAACTCCAAGAGTGCTTCATGCTCTTGAAGGT +
Preference number: 1 (lower is better)
Translates to: PPPRTCAQLRLLSGL*AGPTTPRVLHALEG
Trigger: ACCTTCAAGAGCATGAAGCACTCTTGGAGTTGTGGGTCCTGCCCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 90 bp CTCCCAGTGGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTaGCACCTGCAAGTGTGGAAGGCAAGGGTCCCCCATGGCATCACT +
Preference number: 1 (lower is better)
Translates to: LPVAEPKAQTPPCKT*HLQVWKARVPHGIT
Trigger: AGTGATGCCATGGGGGACCCTTGCCTTCCACACTTGCAGGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 90 bp CATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCAGTGGCTaGGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCTGCA +
Preference number: 1 (lower is better)
Translates to: HSDPLSLRSQLSPSG*AQGPNTSLQNVTPA
Trigger: TGCAGGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 90 bp TGGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCTaGAAGTGTGGAAGGCAAGGGTCCCCCATGGCATCACTGTGTGGA +
Preference number: 1 (lower is better)
Translates to: WLSPRPKHLPAKRDT*KCGRQGSPMASLCG
Trigger: TCCACACAGTGATGCCATGGGGGACCCTTGCCTTCCACACTTGCAGGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 90 bp CCTGTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTaGACCCTTGTTGAATGGATTTGGGTCCTTGCAAATGCCCTGCCA +
Preference number: 1 (lower is better)
Translates to: PVLVFLSPDEEPVAG*TLVEWIWVLANALP
Trigger: TGGCAGGGCATTTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR GCA 90 bp TCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAATTATACCTaGTCCAGACCTGGAGCGCCCCCTCTCGGCCTTCTCCTTGGGAAT +
Preference number: 1 (lower is better)
Translates to: SPLWQGSQCKCSNYT*SRPGAPPLGLLLGN
Trigger: ATTCCCAAGGAGAAGGCCGAGAGGGGGCGCTCCAGGTCTGGAGCAGGTATAATTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 90 bp TTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCAGTaGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACC +
Preference number: 1 (lower is better)
Translates to: FPFRSSVPQVPTVSQ*LSPRPKHLPAKRDT
Trigger: GGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 90 bp GATGACGCCTGCTCCTGTTTGGTTTTGTGTGGATGCCGGTGGAGGTaGGACAAGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCA +
Preference number: 1 (lower is better)
Translates to: DDACSCLVLCGCRWR*DKPSEGASARWWFP
Trigger: TGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTTGTCTCACCTCCACCGGCATCCACACAAAACCAAACAGGAGCAGGCGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 90 bp GTCACAGCAGACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTTaGCAAAGCAAACAGTGGGAGTCCATCCAGGTGCTGAGGGGACAG +
Preference number: 1 (lower is better)
Translates to: VTADIKVVYRGLLGI*QSKQWESIQVLRGQ
Trigger: CTGTCCCCTCAGCACCTGGATGGACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGTCTGCTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 90 bp TCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTaGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAAATG +
Preference number: 1 (lower is better)
Translates to: SSSLSSSSSVRMRSL*QAAPLLNGFGSLQM
Trigger: CATTTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR TCA 90 bp GACACAAAGACTAGGGTGGGAAGAGTGCTTTGGTGGTGGCACCTCTaGTGTCACAGCAGACATCAAGGTGGTCTACCGAGGACTCCTCGG +
Preference number: 1 (lower is better)
Translates to: DTKTRVGRVLWWWHL*CHSRHQGGLPRTPR
Trigger: CCGAGGAGTCCTCGGTAGACCACCTTGATGTCTGCTGTGACATCAGAGGTGCCACCACCAAAGCACTCTTCCCACCCTAGTCTTTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 90 bp CCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTaGGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTA +
Preference number: 1 (lower is better)
Translates to: PDEEPVAGCTLVEWI*VLANALPERSSATL
Trigger: TAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR TCA 90 bp CTGTTTGGTTTTGTGTGGATGCCGGTGGAGGTGAGACAAGCCTTCTaGGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGT +
Preference number: 1 (lower is better)
Translates to: LFGFVWMPVEVRQAF*GCQCTLVVSIPILC
Trigger: ACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTTGTCTCACCTCCACCGGCATCCACACAAAACCAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 90 bp GTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCGTGTaGGTCCGAGTGTGCGTGTGCGCATGTGCTGAGACAAGTTCTTGT +
Preference number: 1 (lower is better)
Translates to: VPICVCACMCACDFV*VRVCVCACAETSSC
Trigger: ACAAGAACTTGTCTCAGCACATGCGCACACGCACACTCGGACTCACACGAAGTCACACGCACACATGCACGCACACACACATATGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR CCA 90 bp GTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCTaGACACAAAGACTAGGGTGGGAAGAGTGCTTTGGTGGTGGCACC +
Preference number: 1 (lower is better)
Translates to: VLSHKSMTSWLKLGR*TQRLGWEECFGGGT
Trigger: GGTGCCACCACCAAAGCACTCTTCCCACCCTAGTCTTTGTGTCCAGCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 90 bp GACATGGCATTCATGGGAATAGTGGGGATGACGCCTGCTCCTGTTTaGTTTTGTGTGGATGCCGGTGGAGGTGAGACAAGCCTTCTGAGG +
Preference number: 1 (lower is better)
Translates to: DMAFMGIVGMTPAPV*FCVDAGGGETSLLR
Trigger: CCTCAGAAGGCTTGTCTCACCTCCACCGGCATCCACACAAAACCAAACAGGAGCAGGCGTCATCCCCACTATTCCCATGAATGCCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 90 bp ATGACTTCATGGCTTAAGCTTGGCCGCTGGACACAAAGACTAGGGTaGGAAGAGTGCTTTGGTGGTGGCACCTCTGATGTCACAGCAGAC +
Preference number: 1 (lower is better)
Translates to: MTSWLKLGRWTQRLG*EECFGGGTSDVTAD
Trigger: GTCTGCTGTGACATCAGAGGTGCCACCACCAAAGCACTCTTCCCACCCTAGTCTTTGTGTCCAGCGGCCAAGCTTAAGCCATGAAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 90 bp AGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTaGAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACT +
Preference number: 1 (lower is better)
Translates to: RKVFSHLSCSLVLQV*RSPYVCVRACVRVT
Trigger: AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR GCA 90 bp GTACAGATCCACACACATACACATATGTGCATGCACGCACACACATaGGCACTGCGGATGTGCCTAGTTTTTGCAGAGGGCGGGTTGCTT +
Preference number: 1 (lower is better)
Translates to: VQIHTHTHMCMHAHT*ALRMCLVFAEGGLL
Trigger: AAGCAACCCGCCCTCTGCAAAAACTAGGCACATCCGCAGTGCGCATGTGTGTGCGTGCATGCACATATGTGTATGTGTGTGGATCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 90 bp GGGAACTCAGCTCTTCGCACTTTCTACTTCTTCTCCTTCCTCCTTTaGACGAAGAACCTTCTCCTCCCCCTTTTTGTCCTCCTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: GNSALRTFYFFSFLL*TKNLLLPLFVLLFL
Trigger: GAGGAAGAGGAGGACAAAAAGGGGGAGGAGAAGGTTCTTCGTCCAAAGGAGGAAGGAGAAGAAGTAGAAAGTGCGAAGAGCTGAGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 90 bp ATATCTATTGGCCATTGGTCCTATCGGTGTGTCTACGACAGAGAGTaGGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAA +
Preference number: 1 (lower is better)
Translates to: ISIGHWSYRCVYDRE*EEAGECSSTQLQFQ
Trigger: TTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGTCGTAGACACACCGATAGGACCAATGGCCAATAGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 90 bp GGCCAGGATGAAGGATGTGGAATTGGAGTAGGAACCAAAGAAAGCTaGAAACGAAACTCCCCTTTCACTAACTGGAGGACTCCTTCTCAT +
Preference number: 1 (lower is better)
Translates to: GQDEGCGIGVGTKES*KRNSPFTNWRTPSH
Trigger: ATGAGAAGGAGTCCTCCAGTTAGTGAAAGGGGAGTTTCGTTTTCAGCTTTCTTTGGTTCCTACTCCAATTCCACATCCTTCATCCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 90 bp TTGAATACGTTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTaGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAG +
Preference number: 1 (lower is better)
Translates to: LNTFHKRIWLSRDTV*AGRTGQGGKERTEK
Trigger: CTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAACGTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
3UTR-3UTR CCA 90 bp TTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAGCGAAAGGTGGGGGCGGGGGGCGGCTCCCTCAGGTaGCACCCTTCACAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: LGISVGPGRGQERKVGAGGGSLR*HPSQAC
Trigger: GCAGGCCTGTGAAGGGTGCCACCTGAGGGAGCCGCC...CCCCGCCCCCACCTTTCGCTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTGAGCCACGGGCGGGTTGCTTTGTaGCTGCAGGGCCGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: PGAHTARIRSPQDLVLSHGRVAL*LQGRLQ
Trigger: CTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCC...GTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR TCA 90 bp TCCTTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAGCGAAAGGTGGGGGCGCTTCCTCAGTCCGGATaGGGAGCCTGTGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SLGISVGPGRGQERKVGALPQSG*GACGRL
Trigger: CAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAG...CGCCCCCACCTTTCGCTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CAA 90 bp CCTAGTTTTTGCAGAGGGCGGGTTGCTTTGTGGCTGCAGGGCCGCTaGCAGGCGGCTCCCTCAGGTGGCACCCTTCACAGGCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: PSFCRGRVALWLQGR*QAAPSGGTLHRPAE
Trigger: CTCTGCAGGCCTGTGAAGGGTGCCACCTGAGGGAGCCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAAAACTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR TCA 90 bp CTGCCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGAGGCTGCACCCTTGTTaGATGGATTTGGGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: LPPPPRTCAQLRLLSGLWRLHPC*MDLGPC
Trigger: GCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCT...CCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CTGCCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGTGCCAAAGCAAACAGTaGGAGTCCATCCAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: LPPPPRTCAQLRLLSGLWCQSKQ*ESIQVL
Trigger: CAGCACCTGGATGGACTCCCACTGTTTGCTTTGGCA...CCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CAA 90 bp ATTATACCTGCTCCAGACCTGGAGCGCCCCCTCTCGGCCTTCTCCTaGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAGCGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: IIPAPDLERPLSAFS*GISVGPGRGQERKV
Trigger: CACCTTTCGCTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAAGGAGAAGGCCGAGAGGGGGCGCTCCAGGTCTGGAGCAGGTATAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp CCTGGAGCGCCCCCTCTCGGCCTTCTCCTTGGGAATCTCAGTAGGGCCGGGCAGTCCTTGCAAATGCCCTaGCAGAAAGGTCTTCAGCCA +
Preference number: 2 (lower is better)
Translates to: PGAPPLGLLLGNLSRAGQSLQMP*QKGLQP
Trigger: TGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGA...CTGCCCGGCCCTACTGAGATTCCCAAGGAGAAGGCCGAGAGGGGGCGCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp TTGGCCACCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTCTGATTGCCCCTGCATaGGTGCAACAAAAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LATRCPHCQDTLPSGPGALIAPA*VQQKLP
Trigger: GGGGAGCTTTTGTTGCACCCATGCAGGGGCAATCAG...AGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGGTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp GGGGCCCGGAGGCGCTCCTCGTTCTCGTCCACGTCCGTGTCGTCAATGAGCGGGGGAGGTCTTGGATTCTaGTTTCTCCAGGCCTTCATA +
Preference number: 2 (lower is better)
Translates to: GARRRSSFSSTSVSSMSGGGLGF*FLQAFI
Trigger: TATGAAGGCCTGGAGAAACCAGAATCCAAGACCTCC...CCCGCTCATTGACGACACGGACGTGGACGAGAACGAGGAGCGCCTCCGGGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR TCA 90 bp TTAGAGGGACGTCTCCACGCTGTGGAGCGGGCTCCCGGGACTGGAGGAAAACACACTCGGGCGTGGCCATaGAGTTGTGAATGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: LEGRLHAVERAPGTGGKHTRAWP*SCEWRS
Trigger: AGACCTCCATTCACAACTTCATGGCCACGCCCGAGT...GTGTTTTCCTCCAGTCCCGGGAGCCCGCTCCACAGCGTGGAGACGTCCCTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp GAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGTCGCCCCCTCGGACCTGTaGTCAGCTGAGGCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: ESEKKPVSAAARSSNFNVAPSDL*SAEAAL
Trigger: GAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGC...GACGTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCGGCAGGAGCGAAAGGTaGGGGCGGGGTGATGAGGGA +
Preference number: 2 (lower is better)
Translates to: QDLVLSHKSMTSWLKLGRGRSER*GRGDEG
Trigger: TCCCTCATCACCCCGCCCCCACCTTTCGCTCCTGCC...GCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR TCA 90 bp GAGGCGCTCCTCGTTCTCGTCCACGTCCGTGTCGTCAATGAGCGGGATGTTGTGACTCGGGCGTGGCCATaGAGTTGTGAATGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: EALLVLVHVRVVNERDVVTRAWP*SCEWRS
Trigger: AGACCTCCATTCACAACTTCATGGCCACGCCCGAGT...CACAACATCCCGCTCATTGACGACACGGACGTGGACGAGAACGAGGAGCGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp TTAGAGGGACGTCTCCACGCTGTGGAGCGGGCTCCCGGGACTGGAGGAAAACACGAGCCTGTGGCAGGCTaGACCCTTGTTGAATGGATT +
Preference number: 2 (lower is better)
Translates to: LEGRLHAVERAPGTGGKHEPVAG*TLVEWI
Trigger: AATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTC...GTGTTTTCCTCCAGTCCCGGGAGCCCGCTCCACAGCGTGGAGACGTCCCTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGCCCCCTCGGACCTGTaGTCAGCTGAGGCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: TESEKKPVSAAARSSNFNAPSDL*SAEAAL
Trigger: GAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGC...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CGCCCCCTCTCGGCCTTCTCCTTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGCTTGTTGAATGGATTTaGGTCCTTGCAAATGCCCTG +
Preference number: 2 (lower is better)
Translates to: RPLSAFSLGISVGPGRGQLVEWI*VLANAL
Trigger: CAGGGCATTTGCAAGGACCCAAATCCATTCAACAAG...CTGCCCTCTGCCCGGCCCTACTGAGATTCCCAAGGAGAAGGCCGAGAGGGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACTACCTGCTCCAGACCTaGAGCGCCCCCTCTCGGCCT +
Preference number: 2 (lower is better)
Translates to: TESEKKPVSAAARSSNFNYLLQT*SAPSRP
Trigger: AGGCCGAGAGGGGGCGCTCCAGGTCTGGAGCAGGTA...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp GCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCGCTTCCTCAGGAGGGTaGCAAAAGTCGGGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: ARWWFPFRSSVPQVPTVSASSGG*QKSGPS
Trigger: AGAGGGGCCCGACTTTTGCCACCCTCCTGAGGAAGC...GGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR TCA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACCTGTCTCCCAGTGGCTaGGCCCAAGGCCCAAACACC +
Preference number: 2 (lower is better)
Translates to: TESEKKPVSAAARSSNFNLSPSG*AQGPNT
Trigger: GGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGACAG...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR TCA 90 bp GCCAGGATACGCTCCCCTCAGGACCTGGTGCTGAGCCACAAATCCATGACTTCACGTCCGTGTCGTCAATaGGCGGGATGTTGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: ARIRSPQDLVLSHKSMTSRPCRQ*AGCCGC
Trigger: ACACCCACAACATCCCGCTCATTGACGACACGGACG...TGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
3UTR-3UTR CCA 90 bp TCCCTTGAAAGGGTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAATACCTGCTCCAGACCTaGAGCGCCCCCTCTCGGCCT +
Preference number: 2 (lower is better)
Translates to: SLERVFSSLAGVSVQMLQYLLQT*SAPSRP
Trigger: AGGCCGAGAGGGGGCGCTCCAGGTCTGGAGCAGGTA...TTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAACCCTTTCAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGATGGCGTTGTTGTTCTaGTTGGGGGACGGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVMALLF*LGDGGG
Trigger: CCCGCCCCCGTCCCCCAACCAGAACAACAACGCCAT...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR TCA 90 bp AGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCCTCCCTGCAAAACGTaGCACCTGCAAGTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: SLLRVPVHVGGFHSDPLSPPCKT*HLQVWK
Trigger: CTTCCACACTTGCAGGTGTCACGTTTTGCAGGGAGG...GGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp GACATGGCATTCATGGGAATAGTGGGGATGACGCCTGCTCCTGTTTGGTTTTGTGGGTTGCTTTGTGGCTaGAGGGCCGCTTGCAGGCGG +
Preference number: 2 (lower is better)
Translates to: DMAFMGIVGMTPAPVWFCGLLCG*RAACRR
Trigger: CCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCC...ACAAAACCAAACAGGAGCAGGCGTCATCCCCACTATTCCCATGAATGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp AGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTAGGGTGGGAAGAGTaGTTTGGTGGTGGCACCTCT +
Preference number: 2 (lower is better)
Translates to: SLLRVPVHVGGFHSDPLSLGWEE*FGGGTS
Trigger: AGAGGTGCCACCACCAAAGCACTCTTCCCACCCTAG...GGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp GTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAATTATACCTGCTCGGGCGGGTTGCTTTGTaGCTGCAGGGCCGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: VFSSLAGVSVQMLQLYLLGRVAL*LQGRLQ
Trigger: CTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCC...GAGCAGGTATAATTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CAA 90 bp TGTCACAGCAGACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTaGCCAAAGCAAACAGTGGGAGTCCATCCAGGTGCTGAGGGGACA +
Preference number: 2 (lower is better)
Translates to: CHSRHQGGLPRTPRH*PKQTVGVHPGAEGT
Trigger: TGTCCCCTCAGCACCTGGATGGACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGTCTGCTGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR TCA 90 bp GCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCTGGTGGTGGCACCTCTaGTGTCACAGCAGACATCAA +
Preference number: 2 (lower is better)
Translates to: ARWWFPFRSSVPQVPTVSWWWHL*CHSRHQ
Trigger: TTGATGTCTGCTGTGACATCAGAGGTGCCACCACCA...GGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp GCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCGTTGTTCCCTCGTTTTaGAGGTGTGCAGGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: ARWWFPFRSSVPQVPTVSVVPSF*RCAGPH
Trigger: ATGGGGACCTGCACACCTGCAAAACGAGGGAACAAC...GGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGGAGCCTGTGGCAGGCTaGACCCTTGTTGAATGGATT +
Preference number: 2 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMREPVAG*TLVEWI
Trigger: AATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTC...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp GTCTCCCAGTGGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCGGGTCTCAGTGCAAATaGTCCAATTATACCTGCTCC +
Preference number: 2 (lower is better)
Translates to: VSQWLSPRPKHLPAKRDTGSQCK*SNYTCS
Trigger: GGAGCAGGTATAATTGGAGCATTTGCACTGAGACCC...GGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CAAGTTCTTGTTAGAGGGACGTCTCCACGCTGTGGAGCGGGCTCCCGGGACTGGCTTGTTGAATGGATTTaGGTCCTTGCAAATGCCCTG +
Preference number: 2 (lower is better)
Translates to: QVLVRGTSPRCGAGSRDWLVEWI*VLANAL
Trigger: CAGGGCATTTGCAAGGACCCAAATCCATTCAACAAG...CCAGTCCCGGGAGCCCGCTCCACAGCGTGGAGACGTCCCTCTAACAAGAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR CCA 90 bp TATAAAGAGGGGCTTCCCAATGAGACAGGGCCCCCAGCCTTGAAGACTGCAAAACGGATGAGGAGCCTGTaGCAGGCTGCACCCTTGTTG +
Preference number: 2 (lower is better)
Translates to: YKEGLPNETGPPALKTAKRMRSL*QAAPLL
Trigger: CAACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCG...TTTTGCAGTCTTCAAGGCTGGGGGCCCTGTCTCATTGGGAAGCCCCTCTTTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp AGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCGGGTTTTCTCCTCTCTaGCAGGGGTCTCAGTGCAAA +
Preference number: 2 (lower is better)
Translates to: SLLRVPVHVGGFHSDPLSGFSPL*QGSQCK
Trigger: TTTGCACTGAGACCCCTGCCAGAGAGGAGAAAACCC...GGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp TCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCAGTGGCTGAGCCCACACAAAGACTAGGGTaGGAAGAGTGCTTTGGTGGT +
Preference number: 2 (lower is better)
Translates to: SIPILCPSGPNCLPVAEPTQRLG*EECFGG
Trigger: ACCACCAAAGCACTCTTCCCACCCTAGTCTTTGTGT...GGGCTCAGCCACTGGGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp AGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTTAAGCTTGGCCGCTaGACACAAAGACTAGGGTGG +
Preference number: 2 (lower is better)
Translates to: SLLRVPVHVGGFHSDPLSLKLGR*TQRLGW
Trigger: CCACCCTAGTCTTTGTGTCCAGCGGCCAAGCTTAAG...GGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGCGGGCTCCCGGGACTaGAGGAAAACACTGAAGAGG +
Preference number: 2 (lower is better)
Translates to: LPERSSATLVVPSFCRCAAGSRD*RKTLKR
Trigger: CCTCTTCAGTGTTTTCCTCCAGTCCCGGGAGCCCGC...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCGGACTCCTCGGCATTTaGCAAAGCAAACAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: QDLVLSHKSMTSWLKLGRGLLGI*QSKQWE
Trigger: CTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCC...GCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp GCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCTGCCCAAGATTTGACTaGTTCTGCTCAGGGGTGACA +
Preference number: 2 (lower is better)
Translates to: ARWWFPFRSSVPQVPTVSCPRFD*FCSGVT
Trigger: TGTCACCCCTGAGCAGAAGCAGTCAAATCTTGGGCA...GGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCGCGTGGTCAGGTAGATaGCGCTGTCTATGGCGTTGT +
Preference number: 2 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPAWSGR*RCLWRC
Trigger: ACAACGCCATAGACAGCGGCATCTACCTGACCACGC...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR CCA 90 bp GTCTCCCAGTGGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCCTTGTTGAATGGATTTaGGTCCTTGCAAATGCCCTG +
Preference number: 2 (lower is better)
Translates to: VSQWLSPRPKHLPAKRDTLVEWI*VLANAL
Trigger: CAGGGCATTTGCAAGGACCCAAATCCATTCAACAAG...GGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp AAAGATTCCAGGTCATGGTACCCCGTTTCTGAACTCCACAGCACAGCACAAAGGGCTTCCTCAGGAGGGTaGCAAAAGTCGGGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: KDSRSWYPVSELHSTAQRASSGG*QKSGPS
Trigger: AGAGGGGCCCGACTTTTGCCACCCTCCTGAGGAAGC...CCTTTGTGCTGTGCTGTGGAGTTCAGAAACGGGGTACCATGACCTGGAATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGGGACGGTGTGAATGGAGGTCTTaGATTCTGGTTTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: RGQVDAAVYGVVVLVGGRCEWRS*ILVSPG
Trigger: GCCTGGAGAAACCAGAATCCAAGACCTCCATTCACA...CCGTCCCCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR TCA 90 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCCGTGTGCGCATGTGCTaGGACAAGTTCTTGTTAGAG +
Preference number: 2 (lower is better)
Translates to: QDLVLSHKSMTSWLKLGRRVRMC*DKFLLE
Trigger: CTCTAACAAGAACTTGTCTCAGCACATGCGCACACG...GCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
3UTR-3UTR GCA 90 bp GACATGCGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGTCCTTGCAAATGCCCTaGCAGAAAGGTCTTCAGCCA +
Preference number: 2 (lower is better)
Translates to: DMRGQVDAAVYGVVVLVGSLQMP*QKGLQP
Trigger: TGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGA...CCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACGCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp GAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGTCGATGTGCCTAGTTTTTaGAGAGGGCGGGTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: ESEKKPVSAAARSSNFNVDVPSF*RGRVAL
Trigger: CAAAGCAACCCGCCCTCTGCAAAAACTAGGCACATC...GACGTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp GACATGGCATTCATGGGAATAGTGGGGATGACGCCTGCTCCTGTTTGGTTTTGTGGTCTGAACTGTGGCTaGGTCCCTGCCGTCATTCTC +
Preference number: 2 (lower is better)
Translates to: DMAFMGIVGMTPAPVWFCGLNCG*VPAVIL
Trigger: GAGAATGACGGCAGGGACGCAGCCACAGTTCAGACC...ACAAAACCAAACAGGAGCAGGCGTCATCCCCACTATTCCCATGAATGCCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR TCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGAGGCTGCACCCTTGTTaGATGGATTTGGGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: NALPERSSATLVVPSFCRRLHPC*MDLGPC
Trigger: GCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCT...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR TCA 90 bp GCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGGAACCAAAGAAAGCTaGAAACGAAACTCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: ASARWWFPFRSSVPQVPTGTKES*KRNSPF
Trigger: GAAAGGGGAGTTTCGTTTTCAGCTTTCTTTGGTTCC...AGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGGTTGTTCCCTCGTTTTaGAGGTGTGCAGGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: NALPERSSATLVVPSFCRVVPSF*RCAGPH
Trigger: ATGGGGACCTGCACACCTGCAAAACGAGGGAACAAC...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp TGTGCGCATGTGCTGAGACAAGTTCTTGTTAGAGGGACGTCTCCACGCTGTGGATCCTTGCAAATGCCCTaGCAGAAAGGTCTTCAGCCA +
Preference number: 2 (lower is better)
Translates to: CAHVLRQVLVRGTSPRCGSLQMP*QKGLQP
Trigger: TGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGA...TCCACAGCGTGGAGACGTCCCTCTAACAAGAACTTGTCTCAGCACATGCGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGGAGCCTGTGGCAGGCTaGACCCTTGTTGAATGGATT +
Preference number: 2 (lower is better)
Translates to: NALPERSSATLVVPSFCREPVAG*TLVEWI
Trigger: AATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTC...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp AAAGATTCCAGGTCATGGTACCCCGTTTCTGAACTCCACAGCACAGCACAAAGGTGCGCACTGCGGATGTaGCTAGTTTTTGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: KDSRSWYPVSELHSTAQRCALRM*LVFAEG
Trigger: GCCCTCTGCAAAAACTAGGCACATCCGCAGTGCGCA...CCTTTGTGCTGTGCTGTGGAGTTCAGAAACGGGGTACCATGACCTGGAATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp GACATGGCATTCATGGGAATAGTGGGGATGACGCCTGCTCCTGTTTGGTTTTGTTGCTCCAATTATACCTaGTCCAGACCTGGAGCGCCC +
Preference number: 2 (lower is better)
Translates to: DMAFMGIVGMTPAPVWFCCSNYT*SRPGAP
Trigger: GGGCGCTCCAGGTCTGGAGCAGGTATAATTGGAGCA...ACAAAACCAAACAGGAGCAGGCGTCATCCCCACTATTCCCATGAATGCCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp CAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGAGTCTGGCAGGGGTCTCAGTaGAAATGCTCCAATTATACC +
Preference number: 2 (lower is better)
Translates to: QGGLPRTPRHLPKQTVGVWQGSQ*KCSNYT
Trigger: GGTATAATTGGAGCATTTGCACTGAGACCCCTGCCA...GACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp AAGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCTCCCTCTCCCTCCATTaGCTTCTTTTGAACTCTTGG +
Preference number: 2 (lower is better)
Translates to: KPSEGASARWWFPFRSSVSLSLH*LLLNSW
Trigger: CCAAGAGTTCAAAAGAAGCCAATGGAGGGAGAGGGA...GACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp AAGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCAAATCCATGACTTCATaGCTTAAGCTTGGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: KPSEGASARWWFPFRSSVKSMTS*LKLGRW
Trigger: CCAGCGGCCAAGCTTAAGCCATGAAGTCATGGATTT...GACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCACTCGTTTTGCAGGTGTaGAGGTCCCCATATGTGTGT +
Preference number: 2 (lower is better)
Translates to: LPERSSATLVVPSFCRCALVLQV*RSPYVC
Trigger: ACACACATATGGGGACCTGCACACCTGCAAAACGAG...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR GCA 90 bp TATAAAGAGGGGCTTCCCAATGAGACAGGGCCCCCAGCCTTGAAGACTGCAAAAAGTGGGGATGACGCCTaGTCCTGTTTGGTTTTGTGT +
Preference number: 2 (lower is better)
Translates to: YKEGLPNETGPPALKTAKSGDDA*SCLVLC
Trigger: ACACAAAACCAAACAGGAGCAGGCGTCATCCCCACT...TTTTGCAGTCTTCAAGGCTGGGGGCCCTGTCTCATTGGGAAGCCCCTCTTTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp GCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTGTGAATGGAGGTCTTaGATTCTGGTTTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: ARKVFSHLSCSLVLQVCRCEWRS*ILVSPG
Trigger: GCCTGGAGAAACCAGAATCCAAGACCTCCATTCACA...CCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR TCA 90 bp AAGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCAGTTTACAAATGGGTaGCATTCTCAATGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: KPSEGASARWWFPFRSSVQFTNG*HSQCAL
Trigger: AAGGGCACATTGAGAATGTCACCCATTTGTAAACTG...GACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGGACGTCTCCACGCTGTaGAGCGGGCTCCCGGGACTG +
Preference number: 2 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWDVSTL*SGLPGL
Trigger: CAGTCCCGGGAGCCCGCTCCACAGCGTGGAGACGTC...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
3UTR-3UTR GCA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGGGGTTGCTTTGTGGCTaGAGGGCCGCTTGCAGGCGG +
Preference number: 2 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWGLLCG*RAACRR
Trigger: CCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCC...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCATTGAAATACGCATCTaGCCATATATACGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: QDLVLSHKSMTSWLKLGRIEIRI*PYIRVC
Trigger: ACACACACGTATATATGGCCAGATGCGTATTTCAAT...GCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp TTCTTTTCTAACCGAAATTCTTTTGCCCAAGATTTGACTGCTTCTGCTCAGGGGCAGCAGACATCAAGGTaGTCTACCGAGGACTCCTCG +
Preference number: 2 (lower is better)
Translates to: FFSNRNSFAQDLTASAQGQQTSR*STEDSS
Trigger: CGAGGAGTCCTCGGTAGACCACCTTGATGTCTGCTG...CCCCTGAGCAGAAGCAGTCAAATCTTGGGCAAAAGAATTTCGGTTAGAAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR TCA 90 bp AAAGATTCCAGGTCATGGTACCCCGTTTCTGAACTCCACAGCACAGCACAAAGGCAGTTTACAAATGGGTaGCATTCTCAATGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: KDSRSWYPVSELHSTAQRQFTNG*HSQCAL
Trigger: AAGGGCACATTGAGAATGTCACCCATTTGTAAACTG...CCTTTGTGCTGTGCTGTGGAGTTCAGAAACGGGGTACCATGACCTGGAATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp GTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAATTATACCTGCTCACCACACAGCTCAAATaGCAAACACACGGTAAAACT +
Preference number: 2 (lower is better)
Translates to: VFSSLAGVSVQMLQLYLLTTQLK*QTHGKT
Trigger: AGTTTTACCGTGTGTTTGCCATTTGAGCTGTGTGGT...GAGCAGGTATAATTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp TTCTTTTCTAACCGAAATTCTTTTGCCCAAGATTTGACTGCTTCTGCTCAGGGGCTCGTTTTGCAGGTGTaGAGGTCCCCATATGTGTGT +
Preference number: 2 (lower is better)
Translates to: FFSNRNSFAQDLTASAQGLVLQV*RSPYVC
Trigger: ACACACATATGGGGACCTGCACACCTGCAAAACGAG...CCCCTGAGCAGAAGCAGTCAAATCTTGGGCAAAAGAATTTCGGTTAGAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp CTCATTGAAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTAATGCACGCACACACATaGGCACTGCGGATGTGCCTA +
Preference number: 2 (lower is better)
Translates to: LIEEHKDPQQMELPFFLLMHAHT*ALRMCL
Trigger: TAGGCACATCCGCAGTGCGCATGTGTGTGCGTGCAT...TAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTTCAATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGCTGATTGCCCCTGCATaGGTGCAACAAAAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PQQMELPFFLLSFKQGHQLIAPA*VQQKLP
Trigger: GGGGAGCTTTTGTTGCACCCATGCAGGGGCAATCAG...CTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp CCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGCAAAACGTGACACCTaGAAGTGTGGAAGGCAAGGG +
Preference number: 2 (lower is better)
Translates to: PQQMELPFFLLSFKQGHQAKRDT*KCGRQG
Trigger: CCCTTGCCTTCCACACTTGCAGGTGTCACGTTTTGC...CTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp CAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACACTCGTTTTGCAGGTGTaGAGGTCCCCATATGTGTGT +
Preference number: 2 (lower is better)
Translates to: QMELPFFLLSFKQGHQGTLVLQV*RSPYVC
Trigger: ACACACATATGGGGACCTGCACACCTGCAAAACGAG...TGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR GCA 90 bp CCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGGTCTCAGTGCAAATaGTCCAATTATACCTGCTCC +
Preference number: 2 (lower is better)
Translates to: PQQMELPFFLLSFKQGHQGSQCK*SNYTCS
Trigger: GGAGCAGGTATAATTGGAGCATTTGCACTGAGACCC...CTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACATTCTCCTTCCTCCTTTaGACGAAGAACCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: QMELPFFLLSFKQGHQGTFSFLL*TKNLLL
Trigger: GAGGAGAAGGTTCTTCGTCCAAAGGAGGAAGGAGAA...TGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGACACAAAGACTAGGGTaGGAAGAGTGCTTTGGTGGT +
Preference number: 2 (lower is better)
Translates to: PQQMELPFFLLSFKQGHQTQRLG*EECFGG
Trigger: ACCACCAAAGCACTCTTCCCACCCTAGTCTTTGTGT...CTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp AAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAGATGCCGCTGTCTATaGCGTTGTTGTTCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: KNTKTLNKWSCPFSYYRLRCRCL*RCCSGW
Trigger: CCAACCAGAACAACAACGCCATAGACAGCGGCATCT...TAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
3UTR-3UTR CCA 90 bp AAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAACCACACAGCTCAAATaGCAAACACACGGTAAAACT +
Preference number: 2 (lower is better)
Translates to: KNTKTLNKWSCPFSYYRLTTQLK*QTHGKT
Trigger: AGTTTTACCGTGTGTTTGCCATTTGAGCTGTGTGGT...TAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CCA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGATTGAAATACGCATCTaGCCATATATACGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWIEIRI*PYIRVC
Trigger: ACACACACGTATATATGGCCAGATGCGTATTTCAAT...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp CTGCCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGAGAGGGCGGGTTGCTTaGTGGCTGCAGGGCCGCTTG +
Preference number: 3 (lower is better)
Translates to: LPPPPRTCAQLRLLSGLWRGRVA*WLQGRL
Trigger: CAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCT...CCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 72 bp GCAGAGGGCGGGTTGCTTTGTGGCTGCAGGGCCGCTTaGAGGCGGCTCCCTCAGGTGGCACCCTTCACAGGC +
Preference number: 3 (lower is better)
Translates to: AEGGLLCGCRAA*RRLPQVAPFTG
Trigger: GCCTGTGAAGGGTGCCACCTGAGGGAGCCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 72 bp TGCCTAGTTTTTGCAGAGGGCGGGTTGCTTTGTGGCTaGAGGGCCGCTTGCAGGCGGCTCCCTCAGGTGGCA +
Preference number: 3 (lower is better)
Translates to: CLVFAEGGLLCG*RAACRRLPQVA
Trigger: TGCCACCTGAGGGAGCCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAAAACTAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp GTCTCCCAGTGGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCTTTGCAGAGGGCGGGTaGCTTTGTGGCTGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: VSQWLSPRPKHLPAKRDTFAEGG*LCGCRA
Trigger: GGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAA...GGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp GATGTGCCTAGTTTTTGCAGAGGGCGGGTTGCTTTGTaGCTGCAGGGCCGCTTGCAGGCGGCTCCCTCAGGT +
Preference number: 3 (lower is better)
Translates to: DVPSFCRGRVAL*LQGRLQAAPSG
Trigger: ACCTGAGGGAGCCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAAAACTAGGCACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp CAAGTTCTTGTTAGAGGGACGTCTCCACGCTGTGGAGCGGGCTCCCGGGACTGGGAAGAGGTAGCTGACTaGGTGACATGCGTGGTCAGG +
Preference number: 3 (lower is better)
Translates to: QVLVRGTSPRCGAGSRDWEEVAD*VTCVVR
Trigger: CCTGACCACGCATGTCACCAAGTCAGCTACCTCTTC...CCAGTCCCGGGAGCCCGCTCCACAGCGTGGAGACGTCCCTCTAACAAGAACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR GCA 72 bp TGGCAGGGGTCTCAGTGCAAATGCTCCAATTATACCTaGTCCAGACCTGGAGCGCCCCCTCTCGGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: WQGSQCKCSNYT*SRPGAPPLGLL
Trigger: GAGAAGGCCGAGAGGGGGCGCTCCAGGTCTGGAGCAGGTATAATTGGAGCATTTGCACTGAGACCCCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp CGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTaGGCAGGACCCACAACTCCAAGAGTGCTTCATGCT +
Preference number: 3 (lower is better)
Translates to: RTCAQLRLLSGL*AGPTTPRVLHA
Trigger: AGCATGAAGCACTCTTGGAGTTGTGGGTCCTGCCCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp GTGACACCTGCAAGTGTGGAAGGCAAGGGTCCCCCATaGCATCACTGTGTGGACCTAGGGGCTTCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: VTPASVEGKGPP*HHCVDLGASSG
Trigger: TCCTGAGGAAGCCCCTAGGTCCACACAGTGATGCCATGGGGGACCCTTGCCTTCCACACTTGCAGGTGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp CGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCAGTaGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAA +
Preference number: 3 (lower is better)
Translates to: RSSVPQVPTVSQ*LSPRPKHLPAK
Trigger: TTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGACAGTTGGGACCTGAGGGACAGAGGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACTTTGCAGAGGGCGGGTaGCTTTGTGGCTGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: TESEKKPVSAAARSSNFNFAEGG*LCGCRA
Trigger: GGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAA...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 72 bp GGCCATTGGTCCTATCGGTGTGTCTACGACAGAGAGTaGGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTC +
Preference number: 3 (lower is better)
Translates to: GHWSYRCVYDRE*EEAGECSSTQL
Trigger: GAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGTCGTAGACACACCGATAGGACCAATGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 72 bp CCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCTaGAAGTGTGGAAGGCAAGGGTCCCCCATGGCATCA +
Preference number: 3 (lower is better)
Translates to: PRPKHLPAKRDT*KCGRQGSPMAS
Trigger: TGATGCCATGGGGGACCCTTGCCTTCCACACTTGCAGGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp TACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTaGGAGTCCATCCAGGTGCTGAGGGGACAGGGTCTG +
Preference number: 3 (lower is better)
Translates to: YRGLLGICQSKQ*ESIQVLRGQGL
Trigger: CAGACCCTGTCCCCTCAGCACCTGGATGGACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGAGTTGTTCCCTCGTTTaGCAGGTGTGCAGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRSCSLV*QVCRSP
Trigger: TGGGGACCTGCACACCTGCAAAACGAGGGAACAACT...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR CAA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGTGGCAGGCTGCACCCTaGTTGAATGGATTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRWQAAP*LNGFGS
Trigger: GGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCA...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR CAA 90 bp GAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGTCGGGTGCCAGTGCACGTaGGTGGTTTCCATTCCGATC +
Preference number: 3 (lower is better)
Translates to: ESEKKPVSAAARSSNFNVGCQCT*VVSIPI
Trigger: GATCGGAATGGAAACCACCAACGTGCACTGGCACCC...GACGTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp GAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGTCCTGTCTATGGCGTTGTaGTTCTGGTTGGGGGACGGG +
Preference number: 3 (lower is better)
Translates to: ESEKKPVSAAARSSNFNVLSMAL*FWLGDG
Trigger: CCCGTCCCCCAACCAGAACAACAACGCCATAGACAG...GACGTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
3UTR TCA 72 bp TTTGTGTGGATGCCGGTGGAGGTGAGACAAGCCTTCTaGGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCG +
Preference number: 3 (lower is better)
Translates to: FVWMPVEVRQAF*GCQCTLVVSIP
Trigger: CGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTTGTCTCACCTCCACCGGCATCCACACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 72 bp TGCTCCTGTTTGGTTTTGTGTGGATGCCGGTGGAGGTaGGACAAGCCTTCTGAGGGTGCCAGTGCACGTTGG +
Preference number: 3 (lower is better)
Translates to: CSCLVLCGCRWR*DKPSEGASARW
Trigger: CCAACGTGCACTGGCACCCTCAGAAGGCTTGTCTCACCTCCACCGGCATCCACACAAAACCAAACAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 72 bp GGGTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATaGTCCAATTATACCTGCTCCAGACCTGGAGCGCCC +
Preference number: 3 (lower is better)
Translates to: GFSPLWQGSQCK*SNYTCSRPGAP
Trigger: GGGCGCTCCAGGTCTGGAGCAGGTATAATTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp TTTATCCCCTTTGCTCATTTGGGGGAAACTGAGGCTTaGCCACCAGGTGCCCACACTGCCAGGATACGCTCC +
Preference number: 3 (lower is better)
Translates to: FIPFAHLGETEA*PPGAHTARIRS
Trigger: GGAGCGTATCCTGGCAGTGTGGGCACCTGGTGGCCAAGCCTCAGTTTCCCCCAAATGAGCAAAGGGGATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp AGCGGGCTCCCGGGACTGGAGGAAAACACTGAAGAGGTAGCTGACTTGGTGACACAGGCTGCACCCTTGTaGAATGGATTTGGGTCCTTG +
Preference number: 3 (lower is better)
Translates to: SGLPGLEENTEEVADLVTQAAPL*NGFGSL
Trigger: CAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTG...TGTCACCAAGTCAGCTACCTCTTCAGTGTTTTCCTCCAGTCCCGGGAGCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR CAA 90 bp TCCTTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAGCGAAAGGTGGGGGCGAGGGACAAAAATGGGTaGACCAGAAAGATATTCTTG +
Preference number: 3 (lower is better)
Translates to: SLGISVGPGRGQERKVGARDKNG*TRKIFL
Trigger: CAAGAATATCTTTCTGGTCAACCCATTTTTGTCCCT...CGCCCCCACCTTTCGCTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 72 bp ACTAGGGTGGGAAGAGTGCTTTGGTGGTGGCACCTCTaGTGTCACAGCAGACATCAAGGTGGTCTACCGAGG +
Preference number: 3 (lower is better)
Translates to: TRVGRVLWWWHL*CHSRHQGGLPR
Trigger: CCTCGGTAGACCACCTTGATGTCTGCTGTGACATCAGAGGTGCCACCACCAAAGCACTCTTCCCACCCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 72 bp GACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTTaGCAAAGCAAACAGTGGGAGTCCATCCAGGTGCTG +
Preference number: 3 (lower is better)
Translates to: DIKVVYRGLLGI*QSKQWESIQVL
Trigger: CAGCACCTGGATGGACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp TCAGTGCAAATGCTCCAATTATACCTGCTCCAGACCTaGAGCGCCCCCTCTCGGCCTTCTCCTTGGGAATCT +
Preference number: 3 (lower is better)
Translates to: SVQMLQLYLLQT*SAPSRPSPWES
Trigger: AGATTCCCAAGGAGAAGGCCGAGAGGGGGCGCTCCAGGTCTGGAGCAGGTATAATTGGAGCATTTGCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp GTGGTGGCACCTCTGATGTCACAGCAGACATCAAGGTaGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCA +
Preference number: 3 (lower is better)
Translates to: VVAPLMSQQTSR*STEDSSAFAKA
Trigger: TGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGTCTGCTGTGACATCAGAGGTGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACTGGCAGGCTGCACCCTaGTTGAATGGATTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: TESEKKPVSAAARSSNFNWQAAP*LNGFGS
Trigger: GGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCA...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACCTCCATTGGCTTCTTTaGAACTCTTGGCCCTGCCCC +
Preference number: 3 (lower is better)
Translates to: TESEKKPVSAAARSSNFNLHWLL*NSWPCP
Trigger: GGGGCAGGGCCAAGAGTTCAAAAGAAGCCAATGGAG...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp GAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGTCAGGACTCCTCGGCATTaGCCAAAGCAAACAGTGGGA +
Preference number: 3 (lower is better)
Translates to: ESEKKPVSAAARSSNFNVRTPRH*PKQTVG
Trigger: TCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCT...GACGTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 72 bp TCGGTGTGTCTACGACAGAGAGTGAGAAGAAGCCGGTaGGTGCAGCAGCACGCAGCTCCAATTTCAACGTCT +
Preference number: 3 (lower is better)
Translates to: SVCLRQRVRRSR*VQQHAAPISTS
Trigger: AGACGTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGTCGTAGACACACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 72 bp GTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTaGACCCTTGTTGAATGGATTTGGGTCCTTGCAAAT +
Preference number: 3 (lower is better)
Translates to: VFLSPDEEPVAG*TLVEWIWVLAN
Trigger: ATTTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR CCA 72 bp GAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTaGGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: EPVAGCTLVEWI*VLANALPERSS
Trigger: TGAAGACCTTTCTGGCAGGGCATTTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR CCA 72 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATaGCTTAAGCTTGGCCGCTGGACACAAAGACTAGGG +
Preference number: 3 (lower is better)
Translates to: QDLVLSHKSMTS*LKLGRWTQRLG
Trigger: CCCTAGTCTTTGTGTCCAGCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp TTCATGGGAATAGTGGGGATGACGCCTGCTCCTGTTTaGTTTTGTGTGGATGCCGGTGGAGGTGAGACAAGC +
Preference number: 3 (lower is better)
Translates to: FMGIVGMTPAPV*FCVDAGGGETS
Trigger: GCTTGTCTCACCTCCACCGGCATCCACACAAAACCAAACAGGAGCAGGCGTCATCCCCACTATTCCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp CTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCTGCAAGTGTGGAAATGGATTTGGGTCCTaGCAAATGCCCTGCCAGAAA +
Preference number: 3 (lower is better)
Translates to: LSPRPKHLPAKRDTCKCGNGFGS*QMPCQK
Trigger: TTTCTGGCAGGGCATTTGCAAGGACCCAAATCCATT...TCCACACTTGCAGGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACCAGGCTGCACCCTTGTaGAATGGATTTGGGTCCTTG +
Preference number: 3 (lower is better)
Translates to: TESEKKPVSAAARSSNFNQAAPL*NGFGSL
Trigger: CAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTG...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCATGGCAGGCTGCACCCTaGTTGAATGGATTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: LPERSSATLVVPSFCRCAWQAAP*LNGFGS
Trigger: GGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCA...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR TCA 72 bp GGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTaGGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCG +
Preference number: 3 (lower is better)
Translates to: GQGGKERTEKPR*AECKTAKERRP
Trigger: CGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
3UTR GCA 72 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTaGAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTG +
Preference number: 3 (lower is better)
Translates to: ERSSATLVVPSF*RCAGPHMCVCV
Trigger: CACGCACACACACATATGGGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR GCA 72 bp CACACACATACACATATGTGCATGCACGCACACACATaGGCACTGCGGATGTGCCTAGTTTTTGCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: HTHTHMCMHAHT*ALRMCLVFAEG
Trigger: GCCCTCTGCAAAAACTAGGCACATCCGCAGTGCGCATGTGTGTGCGTGCATGCACATATGTGTATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCAATGGATTTGGGTCCTaGCAAATGCCCTGCCAGAAA +
Preference number: 3 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPNGFGS*QMPCQK
Trigger: TTTCTGGCAGGGCATTTGCAAGGACCCAAATCCATT...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR CAA 90 bp TGTGCGCATGTGCTGAGACAAGTTCTTGTTAGAGGGACGTCTCCACGCTGTGGAAATGGATTTGGGTCCTaGCAAATGCCCTGCCAGAAA +
Preference number: 3 (lower is better)
Translates to: CAHVLRQVLVRGTSPRCGNGFGS*QMPCQK
Trigger: TTTCTGGCAGGGCATTTGCAAGGACCCAAATCCATT...TCCACAGCGTGGAGACGTCCCTCTAACAAGAACTTGTCTCAGCACATGCGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359149.7
ENST00000370186.5
3UTR-3UTR CAA 90 bp GTCTCCCAGTGGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCGTAAATAGTTCCTTATaGAAATACGCATCTGGCCAT +
Preference number: 3 (lower is better)
Translates to: VSQWLSPRPKHLPAKRDTVNSSL*KYASGH
Trigger: ATGGCCAGATGCGTATTTCAATAAGGAACTATTTAC...GGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 72 bp TTGAAAGGGTTTTCTCCTCTCTGGCAGGGGTCTCAGTaGAAATGCTCCAATTATACCTGCTCCAGACCTGGA +
Preference number: 3 (lower is better)
Translates to: LKGFSPLWQGSQ*KCSNYTCSRPG
Trigger: TCCAGGTCTGGAGCAGGTATAATTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAACCCTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp CACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCTaGACACAAAGACTAGGGTGGGAAGAGTGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: HKSMTSWLKLGR*TQRLGWEECFG
Trigger: ACCAAAGCACTCTTCCCACCCTAGTCTTTGTGTCCAGCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR CCA 72 bp TTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTaGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGA +
Preference number: 3 (lower is better)
Translates to: FHKRIWLSRDTV*AGRTGQGGKER
Trigger: TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
3UTR-3UTR CAA 90 bp ATGCCAGTAAATAGTTCCTTATTGAAATACGCATCTGGCCATATATACGTGTGTCTCTCGGCCTTCTCCTaGGGAATCTCAGTAGGGCCG +
Preference number: 3 (lower is better)
Translates to: MPVNSSLLKYASGHIYVCLSAFS*GISVGP
Trigger: CGGCCCTACTGAGATTCCCAAGGAGAAGGCCGAGAG...ACACACGTATATATGGCCAGATGCGTATTTCAATAAGGAACTATTTACTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp GTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAATTATACCTGCTCACCAGAAAGATATTCTaGCAGTCTAGTTCCCTGAAA +
Preference number: 3 (lower is better)
Translates to: VFSSLAGVSVQMLQLYLLTRKIF*QSSSLK
Trigger: TTTCAGGGAACTAGACTGCAAGAATATCTTTCTGGT...GAGCAGGTATAATTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGCTCTCGGCCTTCTCCTaGGGAATCTCAGTAGGGCCG +
Preference number: 3 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWLSAFS*GISVGP
Trigger: CGGCCCTACTGAGATTCCCAAGGAGAAGGCCGAGAG...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp GAAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTGGGTGCCAGTGCACGTaGGTGGTTTCCATTCCGATC +
Preference number: 3 (lower is better)
Translates to: EEHKDPQQMELPFFLLSFGCQCT*VVSIPI
Trigger: GATCGGAATGGAAACCACCAACGTGCACTGGCACCC...AAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp AAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAGACGCCTGCTCCTGTTaGGTTTTGTGTGGATGCCGG +
Preference number: 3 (lower is better)
Translates to: KNTKTLNKWSCPFSYYRLDACSC*VLCGCR
Trigger: CCGGCATCCACACAAAACCAAACAGGAGCAGGCGTC...TAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGAGTTGTTCCCTCGTTTaGCAGGTGTGCAGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWSCSLV*QVCRSP
Trigger: TGGGGACCTGCACACCTGCAAAACGAGGGAACAACT...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp AAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTACTTCATGGCTTAAGCTaGGCCGCTGGACACAAAGAC +
Preference number: 3 (lower is better)
Translates to: KNTKTLNKWSCPFSYYRLLHGLS*AAGHKD
Trigger: GTCTTTGTGTCCAGCGGCCAAGCTTAAGCCATGAAG...TAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp CCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGTCTTTTGCCCAAGATTaGACTGCTTCTGCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: PQQMELPFFLLSFKQGHQSFAQD*TASAQG
Trigger: CCCCTGAGCAGAAGCAGTCAAATCTTGGGCAAAAGA...CTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR TCA 72 bp CAGCAGCACGCAGCTCCAATTTCAACGTCTCAAATTTaGTTTCTCATTGAAGAACACAAAGACCCTCAACAA +
Preference number: 3 (lower is better)
Translates to: QQHAAPISTSQI*FLIEEHKDPQQ
Trigger: TTGTTGAGGGTCTTTGTGTTCTTCAATGAGAAATCAAATTTGAGACGTTGAAATTGGAGCTGCGTGCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR-3UTR CAA 90 bp AAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAACCAGAAAGATATTCTaGCAGTCTAGTTCCCTGAAA +
Preference number: 3 (lower is better)
Translates to: KNTKTLNKWSCPFSYYRLTRKIF*QSSSLK
Trigger: TTTCAGGGAACTAGACTGCAAGAATATCTTTCTGGT...TAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
3UTR GCA 72 bp TCATTGAAGAACACAAAGACCCTCAACAAATGGAGTTaGCCTTTTTCTTATTATCGTTTAAACAAGGACATC +
Preference number: 3 (lower is better)
Translates to: SLKNTKTLNKWS*PFSYYRLNKDI
Trigger: GATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTTCAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
CDS-3UTR CCA 90 bp TTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAGCGAAAGGTGGGGGCGGGGAAGGATGGAAAGGCCTaGGCACGGGGCGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGISVGPGRGQERKVGAGKDGKA*ARGGLA
Trigger: GGCCAGGCCGCCCCGTGCCCAGGCCTTTCCATCCTT...CCCCGCCCCCACCTTTCGCTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370186.5
3UTR CAA 72 bp GCTCCAGACCTGGAGCGCCCCCTCTCGGCCTTCTCCTaGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: APDLERPLSAFS*GISVGPGRGQE
Trigger: CTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAAGGAGAAGGCCGAGAGGGGGCGCTCCAGGTCTGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
CDS-3UTR TCA 90 bp CTGCCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGGCACGGCTAGCTTTGTaGGCTTCCCCTGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: LPPPPRTCAQLRLLSGLWARLAL*ASPEGQ
Trigger: CTGTCCTTCAGGGGAAGCTCACAAAGCTAGCCGTGC...CCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAGCGAAAGGTGGGGGCGGGGCTTCCTTCAGGCACTTaGGCTGGCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LGISVGPGRGQERKVGAGLPSGT*AGWWGW
Trigger: CCATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAG...CCCCGCCCCCACCTTTCGCTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CAAGTTCTTGTTAGAGGGACGTCTCCACGCTGTGGAGCGGGCTCCCGGGACTGGTCCTTCCCGGGCCCGTaGCCGGCTTCCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QVLVRGTSPRCGAGSRDWSFPGP*PASFRH
Trigger: GTGCCTGAAGGAAGCCGGGCACGGGCCCGGGAAGGA...CCAGTCCCGGGAGCCCGCTCCACAGCGTGGAGACGTCCCTCTAACAAGAACTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTGAGCCACTTGCAGAGGGCGGGTTaGTTTGTGGCTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PGAHTARIRSPQDLVLSHLQRAG*FVAAGP
Trigger: CGGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAA...GTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp TTGGCCACCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTTTGAACTCTTGGCCCTaGCCCCGCCCCCTCGGACCT +
Preference number: 4 (lower is better)
Translates to: LATRCPHCQDTLPSGPGALNSWP*PRPLGP
Trigger: AGGTCCGAGGGGGCGGGGGCAGGGCCAAGAGTTCAA...AGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGGTGGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGGCAGAAGAAGCCGGTGAGTaGAGCAGCACGCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PPPPRTCAQLRLLSGLWAEEAGE*SSTQLQ
Trigger: TTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTC...TGCCCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TTGGCCACCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTGGGCCGGCCCATCGTTaGTGCCATCCCCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: LATRCPHCQDTLPSGPGAGPAHR*CHPLSQ
Trigger: CTGTGACAGGGGATGGCACCAACGATGGGCCGGCCC...AGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGGTGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTCCACGTCCGCCTTCTTaGGGGCCGGCCCATCGTTGG +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVPRPPS*GPAHRW
Trigger: CCAACGATGGGCCGGCCCTCAAGAAGGCGGACGTGG...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GGGGCCCGGAGGCGCTCCTCGTTCTCGTCCACGTCCGTGTCGTCAATGAGCGGGCAGGGCCCCCAGCCTTaGAGACTGCAAAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: GARRRSSFSSTSVSSMSGQGPQP*RLQKQE
Trigger: CTCTTGTTTTTGCAGTCTTCAAGGCTGGGGGCCCTG...CCCGCTCATTGACGACACGGACGTGGACGAGAACGAGGAGCGCCTCCGGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGGGACGGAGGGCTGCGGCCGAGTaGTCCCCACGCTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: RGQVDAAVYGVVVLVGGRRAAAE*SPRSAP
Trigger: CGGTGCAGAGCGTGGGGAGCACTCGGCCGCAGCCCT...CCGTCCCCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGACGTCTCCACGCTGTaGAGCGGGCTCCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVDVSTL*SGLPGL
Trigger: CAGTCCCGGGAGCCCGCTCCACAGCGTGGAGACGTC...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
3UTR CAA 72 bp GCGGATGTGCCTAGTTTTTGCAGAGGGCGGGTTGCTTaGTGGCTGCAGGGCCGCTTGCAGGCGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ADVPSFCRGRVA*WLQGRLQAAPS
Trigger: TGAGGGAGCCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAAAACTAGGCACATCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
CDS-3UTR TCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAACCACGTCCGCCTTCTTaGGGGCCGGCCCATCGTTGG +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKPRPPS*GPAHRW
Trigger: CCAACGATGGGCCGGCCCTCAAGAAGGCGGACGTGG...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp CCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTGAGCCACCCATGTCGCCCATGCTaGCTGTCAGGCCTTCTCACA +
Preference number: 4 (lower is better)
Translates to: PGAHTARIRSPQDLVLSHPCRPC*LSGLLT
Trigger: TGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGG...GTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTGAGCCACGCCCGTAGATCTGCCTaGGCTTCTCCAGGTCATTGG +
Preference number: 4 (lower is better)
Translates to: PGAHTARIRSPQDLVLSHARRSA*ASPGHW
Trigger: CCAATGACCTGGAGAAGCGCAGGCAGATCTACGGGC...GTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp TTGGCCACCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTTTGTCTTCCGGGATCTaGTCGCGCACGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LATRCPHCQDTLPSGPGALSSGI*SRTGWK
Trigger: CTTCCAGCCCGTGCGCGAGCAGATCCCGGAAGACAA...AGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGGTGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp TATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGTCCTTCCCGGGCCCGTaGCCGGCTTCCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: YGFRETPSGREGLDRAVKSFPGP*PASFRH
Trigger: GTGCCTGAAGGAAGCCGGGCACGGGCCCGGGAAGGA...CTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp TTAGAGGGACGTCTCCACGCTGTGGAGCGGGCTCCCGGGACTGGAGGAAAACACGATCCGCTCCAAGGATaGAAAGGCCTGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: LEGRLHAVERAPGTGGKHDPLQG*KGLGTG
Trigger: CCCCGTGCCCAGGCCTTTCCATCCTTGGAGCGGATC...GTGTTTTCCTCCAGTCCCGGGAGCCCGCTCCACAGCGTGGAGACGTCCCTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGCAGCCACGGGGACCTaGAGGAGCTGCCCGTTCCGG +
Preference number: 4 (lower is better)
Translates to: KEYGFRETPSGREGLDRAAATGT*RSCPFR
Trigger: CCGGAACGGGCAGCTCCTCCAGGTCCCCGTGGCTGC...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTTCCCTGCGATGCCCATaGCGAAGCCCACGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVSLRCP*RSPRPP
Trigger: AGGCGGACGTGGGCTTCGCCATGGGCATCGCAGGGA...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGCAGCGACTCTGTGGGTaGCTCCGTCGCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: YGFRETPSGREGLDRAVKQRLCG*LRRQGQ
Trigger: CTGGCCCTGGCGACGGAGCCACCCACAGAGTCGCTG...CTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp CCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGGCAGCCAGTGCACGTTGGTaGTTTCCATTCCGATCCTCT +
Preference number: 4 (lower is better)
Translates to: PPPPRTCAQLRLLSGLWAASARW*FPFRSS
Trigger: AGAGGATCGGAATGGAAACCACCAACGTGCACTGGC...TGCCCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAACAGGCCCTCTGTGGGTaGGGTCTTCAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKQALCG*GLQPPA
Trigger: TGCCGGAGGCTGAAGACCTCACCCACAGAGGGCCTG...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GTCTCCCAGTGGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCGCAGGTCGCCGTACTTaGCCTGGGCAATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VSQWLSPRPKHLPAKRDTAGRRT*PGQCPP
Trigger: TGGGGGACATTGCCCAGGTCAAGTACGGCGACCTGC...GGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGGGTCATTGGCCTGGATaGGCACGCCGTCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YGFRETPSGREGLDRAVKGHWPG*ARRRLA
Trigger: TGCCAGCCGACGGCGTGCTCATCCAGGCCAATGACC...CTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GGGGCCCGGAGGCGCTCCTCGTTCTCGTCCACGTCCGTGTCGTCAATGAGCGGGCGCCAAACTGGACGATaGCAATCTGAATCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: GARRRSSFSSTSVSSMSGRQTGR*QSESRK
Trigger: CTTTCGGGATTCAGATTGTCATCGTCCAGTTTGGCG...CCCGCTCATTGACGACACGGACGTGGACGAGAACGAGGAGCGCCTCCGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TCCTTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAGCGAAAGGTGGGGGCGCCTCCCTGCAAAACGTaGCACCTGCAAGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLGISVGPGRGQERKVGAPPCKT*HLQVWK
Trigger: CTTCCACACTTGCAGGTGTCACGTTTTGCAGGGAGG...CGCCCCCACCTTTCGCTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TGCAGGCGGCTCCCTCAGGTGGCACCCTTCACAGGCCTGCAGAGCACTCAACTTGGATGCCGGTGGAGGTaGGACAAGCCTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: CRRLPQVAPFTGLQSTQLGCRWR*DKPSEG
Trigger: ACCCTCAGAAGGCTTGTCTCACCTCCACCGGCATCC...AAGTTGAGTGCTCTGCAGGCCTGTGAAGGGTGCCACCTGAGGGAGCCGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp TATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGCACCCACGGTCCCAGTaGCCAGGCAAGGTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: YGFRETPSGREGLDRAVKHPRSQ*PGKVWR
Trigger: CCGCCAAACCTTGCCTGGGCACTGGGACCGTGGGTG...CTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGGGGACATCCCGCTGCTaGTGGGGCTTGGGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: YGFRETPSGREGLDRAVKGTSRC*WGLGWN
Trigger: GTTCCACCCCAAGCCCCAGCAGCAGCGGGATGTCCC...CTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCGCCTCCTCGATCTTCTaGAGCGCCTCGGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFASSIF*SASAPR
Trigger: GCGAGGGGCCGAGGCGCTGCAGAAGATCGAGGAGGC...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAGCCTCCTCGATCTTCTaGAGCGCCTCGGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERASSIF*SASAPR
Trigger: GCGAGGGGCCGAGGCGCTGCAGAAGATCGAGGAGGC...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGACCGGCGTGCACTCTaGCAGCCATGTCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKDRRAL*QPCPAF
Trigger: GAAGGCCGGACATGGCTGGCAGAGTGCACGCCGGTC...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCAGTGGCTGAGCCCCCGGCCCATCGTTGGTaGCATCCCCTGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SIPILCPSGPNCLPVAEPPAHRW*HPLSQP
Trigger: TGGCTGTGACAGGGGATGGCACCAACGATGGGCCGG...GGGCTCAGCCACTGGGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CTGCCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGCTCGTTTTGCAGGTGTaGAGGTCCCCATATGTGTGT +
Preference number: 4 (lower is better)
Translates to: LPPPPRTCAQLRLLSGLWLVLQV*RSPYVC
Trigger: ACACACATATGGGGACCTGCACACCTGCAAAACGAG...CCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTCAGCGACTCTGTGGGTaGCTCCGTCGCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASARWWFPFRSSVPQVPTQRLCG*LRRQGQ
Trigger: CTGGCCCTGGCGACGGAGCCACCCACAGAGTCGCTG...AGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGCAGCAGCGACTCTGTaGGTGGCTCCGTCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KEYGFRETPSGREGLDRAAAATL*VAPSPG
Trigger: CCCTGGCGACGGAGCCACCCACAGAGTCGCTGCTGC...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp CTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCTGCAAGTGTGGAGGTCATTGGCCTGGATaGGCACGCCGTCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSPRPKHLPAKRDTCKCGGHWPG*ARRRLA
Trigger: TGCCAGCCGACGGCGTGCTCATCCAGGCCAATGACC...TCCACACTTGCAGGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGATGGTGTAGTGCTCTaGGGGTGGCGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKDGVVL*GWRVQG
Trigger: CCCCTGCACTCGCCACCCTCAGAGCACTACACCATC...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTCTTCCTTCAGGCACTTaGGCTGGCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVLPSGT*AGWWGW
Trigger: CCATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAG...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGCCTGGAGGAATGAGTaGATGGGGGCCTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKAWRNE*MGAWPT
Trigger: TGTGGGCCAGGCCCCCATTCACTCATTCCTCCAGGC...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCGCAGCTCCGCCAGCGTaGACCCAAAGCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFAAPPA*TQSLQP
Trigger: AGGCTGGAGGCTTTGGGTGCACGCTGGCGGAGCTGC...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp AGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCGACCGGCGTGCACTCTaGCAGCCATGTCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SLLRVPVHVGGFHSDPLSDRRAL*QPCPAF
Trigger: GAAGGCCGGACATGGCTGGCAGAGTGCACGCCGGTC...GGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTCGGGCTCCTGGCCTaGAGAGAAGTCCCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: KEYGFRETPSGREGLDRAVGLLA*REVPVG
Trigger: GCCTACCGGGACTTCTCTGCAGGCCAGGAGCCCGAC...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAGCCACCACCTGCCGCTaGTCACCAGTGGTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERATTCR*SPVVLS
Trigger: CGACAGCACCACTGGTGAGCAGCGGCAGGTGGTGGC...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TCCTTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAGCGAAAGGTGGGGGCGGAGCCTGTGGCAGGCTaGACCCTTGTTGAATGGATT +
Preference number: 4 (lower is better)
Translates to: SLGISVGPGRGQERKVGAEPVAG*TLVEWI
Trigger: AATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTC...CGCCCCCACCTTTCGCTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCCGCCAGGCCCTCTGTaGGTGAGGTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ARWWFPFRSSVPQVPTVSPPGPL*VRSSAS
Trigger: GGAGGCTGAAGACCTCACCCACAGAGGGCCTGGCGG...GGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCGAGCACGCCGTCGGCTaGCAGCAGGTCGCCGTACTT +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFEHAVG*QQVAVL
Trigger: AAGTACGGCGACCTGCTGCCAGCCGACGGCGTGCTC...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp CGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGGGACGGGTCTTATTGCCCACCTaGCGTGGGAGGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RGQVDAAVYGVVVLVGGRVLLPT*RGRAPS
Trigger: GGAAGGCGCCCTCCCACGCCAGGTGGGCAATAAGAC...CCGTCCCCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGTCCCAGTCGGGCTCCTaGCCTGCAGAGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: KEYGFRETPSGREGLDRASQSGS*PAEKSR
Trigger: CCGGGACTTCTCTGCAGGCCAGGAGCCCGACTGGGA...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGGGCCGGCCCATCGTTaGTGCCATCCCCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: KEYGFRETPSGREGLDRAGPAHR*CHPLSQ
Trigger: CTGTGACAGGGGATGGCACCAACGATGGGCCGGCCC...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp GCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCTCCCTGCGATGCCCATaGCGAAGCCCACGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: ARWWFPFRSSVPQVPTVSSLRCP*RSPRPP
Trigger: AGGCGGACGTGGGCTTCGCCATGGGCATCGCAGGGA...GGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTCAGCGACTCTGTGGGTaGCTCCGTCGCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTQRLCG*LRRQGQ
Trigger: CTGGCCCTGGCGACGGAGCCACCCACAGAGTCGCTG...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACGCAGCAGCGACTCTGTaGGTGGCTCCGTCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FAGVQVPICVCACMCACDAAATL*VAPSPG
Trigger: CCCTGGCGACGGAGCCACCCACAGAGTCGCTGCTGC...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCAGTGGCTGAGCCCCGGATGAGGAGCCTGTaGCAGGCTGCACCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SIPILCPSGPNCLPVAEPRMRSL*QAAPLL
Trigger: CAACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCG...GGGCTCAGCCACTGGGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTGAGCCACTGCCAAAGCAAACAGTaGGAGTCCATCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGAHTARIRSPQDLVLSHCQSKQ*ESIQVL
Trigger: CAGCACCTGGATGGACTCCCACTGTTTGCTTTGGCA...GTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGGTCAGTCCCGCATGTaGCCGGGGGCCTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SRDTVWAGRTGQGGKERTGQSRM*PGAWRN
Trigger: ATTCCTCCAGGCCCCCGGCCACATGCGGGACTGACC...TGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp TCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCAGTGGCTGAGCCCCGACAGCTATGCAGGTaGGGTCACCCACGACCTCAT +
Preference number: 4 (lower is better)
Translates to: SIPILCPSGPNCLPVAEPRQLCR*GHPRPH
Trigger: ATGAGGTCGTGGGTGACCTCACCTGCATAGCTGTCG...GGGCTCAGCCACTGGGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTCCTCCCCGGGCTGGATaGTGCCGCATTTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTPPRAG*CRIWLR
Trigger: TCGCAGCCAAATGCGGCATCATCCAGCCCGGGGAGG...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGCCACGTCCGCCTTCTTaGGGGCCGGCCCATCGTTGG +
Preference number: 4 (lower is better)
Translates to: ARKVFSHLSCSLVLQVCRPRPPS*GPAHRW
Trigger: CCAACGATGGGCCGGCCCTCAAGAAGGCGGACGTGG...CCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGGATGGTGTAGTGCTCTaGGGGTGGCGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRDGVVL*GWRVQG
Trigger: CCCCTGCACTCGCCACCCTCAGAGCACTACACCATC...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTCGTCCGTGTCGTCAATaGGCGGGATGTTGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVRPCRQ*AGCCGC
Trigger: ACACCCACAACATCCCGCTCATTGACGACACGGACG...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GTCTCCCAGTGGCTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCCGTCCGTGTCGTCAATaGGCGGGATGTTGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: VSQWLSPRPKHLPAKRDTRPCRQ*AGCCGC
Trigger: ACACCCACAACATCCCGCTCATTGACGACACGGACG...GGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGTCGCTCCTCCGGGCTTCTaGCGCTCCCTCTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: ESEKKPVSAAARSSNFNVAPPGF*RSLSLH
Trigger: ATGGAGGGAGAGGGAGCGTCAGAAGCCCGGAGGAGC...GACGTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp CTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCTGCAAGTGTGGACTGTCTCCCAGTGGCTaGGCCCAAGGCCCAAACACC +
Preference number: 4 (lower is better)
Translates to: LSPRPKHLPAKRDTCKCGLSPSG*AQGPNT
Trigger: GGTGTTTGGGCCTTGGGCTCAGCCACTGGGAGACAG...TCCACACTTGCAGGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGAGGGCTGCGGCCGAGTaGTCCCCACGCTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: NALPERSSATLVVPSFCRRAAAE*SPRSAP
Trigger: CGGTGCAGAGCGTGGGGAGCACTCGGCCGCAGCCCT...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACGGGACATCCCGCTGCTaGTGGGGCTTGGGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: FAGVQVPICVCACMCACDGTSRC*WGLGWN
Trigger: GTTCCACCCCAAGCCCCAGCAGCAGCGGGATGTCCC...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGTCGCAGCTCCGCCAGCGTaGACCCAAAGCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ESEKKPVSAAARSSNFNVAAPPA*TQSLQP
Trigger: AGGCTGGAGGCTTTGGGTGCACGCTGGCGGAGCTGC...GACGTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCGTCGGGCTCCTGGCCTaGAGAGAAGTCCCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: QDLVLSHKSMTSWLKLGRVGLLA*REVPVG
Trigger: GCCTACCGGGACTTCTCTGCAGGCCAGGAGCCCGAC...GCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGATGCCGCATTTGGCTaGGATGGCCCGGGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: KEYGFRETPSGREGLDRADAAFG*DGPGRV
Trigger: AACACGGCCCGGGCCATCGCAGCCAAATGCGGCATC...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGGTCTGAACTGTGGCTaGGTCCCTGCCGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVGLNCG*VPAVIL
Trigger: GAGAATGACGGCAGGGACGCAGCCACAGTTCAGACC...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAAGGATGGAAAGGCCTaGGCACGGGGCGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCKDGKA*ARGGLA
Trigger: GGCCAGGCCGCCCCGTGCCCAGGCCTTTCCATCCTT...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCACATCCCGCTGCTGCTaGGGCTTGGGGTGGAACTCG +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFTSRCC*GLGWNS
Trigger: CGAGTTCCACCCCAAGCCCCAGCAGCAGCGGGATGT...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGACATCCCGCTGCTGCTaGGGCTTGGGGTGGAACTCG +
Preference number: 4 (lower is better)
Translates to: KEYGFRETPSGREGLDRATSRCC*GLGWNS
Trigger: CGAGTTCCACCCCAAGCCCCAGCAGCAGCGGGATGT...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp CCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTGCAGCCACGGGGACCTaGAGGAGCTGCCCGTTCCGG +
Preference number: 4 (lower is better)
Translates to: PERSSATLVVPSFCRCAGAATGT*RSCPFR
Trigger: CCGGAACGGGCAGCTCCTCCAGGTCCCCGTGGCTGC...ACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AAGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCGAGCACGCCGTCGGCTaGCAGCAGGTCGCCGTACTT +
Preference number: 4 (lower is better)
Translates to: KPSEGASARWWFPFRSSVEHAVG*QQVAVL
Trigger: AAGTACGGCGACCTGCTGCCAGCCGACGGCGTGCTC...GACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAAGGAAGTCTACCGCGTaGTCAGTCCCGCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKRKSTA*SVPHVA
Trigger: GGCCACATGCGGGACTGACCACGCGGTAGACTTCCT...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCCAGGCCCTCTGTGGGTaGGGTCTTCAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLQALCG*GLQPPA
Trigger: TGCCGGAGGCTGAAGACCTCACCCACAGAGGGCCTG...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGGTCATTGGCCTGGATaGGCACGCCGTCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLGHWPG*ARRRLA
Trigger: TGCCAGCCGACGGCGTGCTCATCCAGGCCAATGACC...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp TATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGCGACAGCTATGCAGGTaGGGTCACCCACGACCTCAT +
Preference number: 4 (lower is better)
Translates to: YGFRETPSGREGLDRAVKRQLCR*GHPRPH
Trigger: ATGAGGTCGTGGGTGACCTCACCTGCATAGCTGTCG...CTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCCCTCCCCGGGCTGGATaGTGCCGCATTTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLPPRAG*CRIWLR
Trigger: TCGCAGCCAAATGCGGCATCATCCAGCCCGGGGAGG...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGCCTCCCCGGGCTGGATaGTGCCGCATTTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELPPRAG*CRIWLR
Trigger: TCGCAGCCAAATGCGGCATCATCCAGCCCGGGGAGG...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGACTTCCTTCAGGCACTTaGGCTGGCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERLPSGT*AGWWGW
Trigger: CCATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAG...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCCACCCACGGTCCCAGTaGCCAGGCAAGGTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCHPRSQ*PGKVWR
Trigger: CCGCCAAACCTTGCCTGGGCACTGGGACCGTGGGTG...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGTGGCCATGTCGCCCATaGTGCCTGTCAGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRWPCRP*CLSGLL
Trigger: GAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCA...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCGGGACCTGGAGGAGCTaGCCGTTCCGGATGACCGTG +
Preference number: 4 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCGTWRS*PFRMTV
Trigger: CACGGTCATCCGGAACGGGCAGCTCCTCCAGGTCCC...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGGGGACCTGGAGGAGCTaGCCGTTCCGGATGACCGTG +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELGTWRS*PFRMTV
Trigger: CACGGTCATCCGGAACGGGCAGCTCCTCCAGGTCCC...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGACCGGCGTGCACTCTaGCAGCCATGTCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLDRRAL*QPCPAF
Trigger: GAAGGCCGGACATGGCTGGCAGAGTGCACGCCGGTC...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGTTGTCTTCCGGGATCTaGTCGCGCACGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KEYGFRETPSGREGLDRALSSGI*SRTGWK
Trigger: CTTCCAGCCCGTGCGCGAGCAGATCCCGGAAGACAA...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCAGTCCCGGTAGGCGATaGAGATGGTGCGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFSPGRR*RWCGGH
Trigger: ATGGCCTCCGCACCATCTGCATCGCCTACCGGGACT...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTCGGGCTCCTGGCCTaGAGAGAAGTCCCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLVGLLA*REVPVG
Trigger: GCCTACCGGGACTTCTCTGCAGGCCAGGAGCCCGAC...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCGATGCCGCATTTGGCTaGGATGGCCCGGGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: QDLVLSHKSMTSWLKLGRDAAFG*DGPGRV
Trigger: AACACGGCCCGGGCCATCGCAGCCAAATGCGGCATC...GCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGCCACCACCTGCCGCTaGTCACCAGTGGTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLATTCR*SPVVLS
Trigger: CGACAGCACCACTGGTGAGCAGCGGCAGGTGGTGGC...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp AGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAACCGGCCCATCGTTGGTaGCATCCCCTGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: RDTVWAGRTGQGGKERTEPAHRW*HPLSQP
Trigger: TGGCTGTGACAGGGGATGGCACCAACGATGGGCCGG...TTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGGGCCACGTCGGTCCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: NALPERSSATLVVPSFCRGHVGP*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGGACCGACGTGGCC...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TCCCTTGAAAGGGTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAAGGCCACGTCGGTCCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLERVFSSLAGVSVQMLQGHVGP*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGGACCGACGTGGCC...TTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAACCCTTTCAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTCCTTCCCGGGCCCGTaGCCGGCTTCCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: NALPERSSATLVVPSFCRSFPGP*PASFRH
Trigger: GTGCCTGAAGGAAGCCGGGCACGGGCCCGGGAAGGA...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGGCCCCCTCGGACCTGTaGTCAGCTGAGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ARKVFSHLSCSLVLQVCRAPSDL*SAEAAL
Trigger: GAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGC...CCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACAAGAGGCAGGCCCTCTaGGACAGCCACGACCAGCAC +
Preference number: 4 (lower is better)
Translates to: FAGVQVPICVCACMCACDKRQAL*DSHDQH
Trigger: GTGCTGGTCGTGGCTGTCCCAGAGGGCCTGCCTCTT...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTAAGAGGCAGGCCCTCTaGGACAGCCACGACCAGCAC +
Preference number: 4 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGKRQAL*DSHDQH
Trigger: GTGCTGGTCGTGGCTGTCCCAGAGGGCCTGCCTCTT...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAATCCCAGTCGGGCTCCTaGCCTGCAGAGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQSQSGS*PAEKSR
Trigger: CCGGGACTTCTCTGCAGGCCAGGAGCCCGACTGGGA...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCTCCCAGTCGGGCTCCTaGCCTGCAGAGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLSQSGS*PAEKSR
Trigger: CCGGGACTTCTCTGCAGGCCAGGAGCCCGACTGGGA...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGGGCCGGCCCATCGTTaGTGCCATCCCCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLGPAHR*CHPLSQ
Trigger: CTGTGACAGGGGATGGCACCAACGATGGGCCGGCCC...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGGCGGGCTCCCGGGACTaGAGGAAAACACTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRAGSRD*RKTLKR
Trigger: CCTCTTCAGTGTTTTCCTCCAGTCCCGGGAGCCCGC...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp CCAGGTGCCCACACTGCCAGGATACGCTCCCCTCAGGACCTGGTGCTGAGCCACTTCTCCTTCCTCCTTTaGACGAAGAACCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PGAHTARIRSPQDLVLSHFSFLL*TKNLLL
Trigger: GAGGAGAAGGTTCTTCGTCCAAAGGAGGAAGGAGAA...GTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CTGCCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGACCACACAGCTCAAATaGCAAACACACGGTAAAACT +
Preference number: 4 (lower is better)
Translates to: LPPPPRTCAQLRLLSGLWTTQLK*QTHGKT
Trigger: AGTTTTACCGTGTGTTTGCCATTTGAGCTGTGTGGT...CCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp ACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGGGCAGGAGCGAAAGGTaGGGGCGGGGTGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: TSRWSTEDSSAFAKANSGGRSER*GRGDEG
Trigger: TCCCTCATCACCCCGCCCCCACCTTTCGCTCCTGCC...CCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACTCGAGAGACACCGTCTaGGCGGGAAGGACTGGACAG +
Preference number: 4 (lower is better)
Translates to: PSGREGLDRAVKKEQKSHSRDTV*AGRTGQ
Trigger: CTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGA...GTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGGCAGGTCGCCGTACTTaGCCTGGGCAATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VLANALPERSSATLVVPSAGRRT*PGQCPP
Trigger: TGGGGGACATTGCCCAGGTCAAGTACGGCGACCTGC...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTGGCCCGGGCCGTGTTaGTGTTGTCCCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: VLANALPERSSATLVVPSWPGPC*CCPQSP
Trigger: TGGTGACTGGGGACAACATCAACACGGCCCGGGCCA...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGTGGCCCGGGCCGTGTTaGTGTTGTCCCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELWPGPC*CCPQSP
Trigger: TGGTGACTGGGGACAACATCAACACGGCCCGGGCCA...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCTGCGGATCCGCCGGTTaGACTCCTTCCCTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: QDLVLSHKSMTSWLKLGRCGSAG*TPSLLG
Trigger: GCCTAGAAGGGAAGGAGTTCAACCGGCGGATCCGCA...GCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTTGCGGATCCGCCGGTTaGACTCCTTCCCTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGCGSAG*TPSLLG
Trigger: GCCTAGAAGGGAAGGAGTTCAACCGGCGGATCCGCA...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAAGATGGTGTAGTGCTCTaGGGGTGGCGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQDGVVL*GWRVQG
Trigger: CCCCTGCACTCGCCACCCTCAGAGCACTACACCATC...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAACTTCCTCAGTCCGGATaGGGAGCCTGTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQLPQSG*GACGRL
Trigger: CAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAG...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGCCATGTCGCCCATGCTaGCTGTCAGGCCTTCTCACA +
Preference number: 4 (lower is better)
Translates to: REGLDRAVKKEQKSHGERPCRPC*LSGLLT
Trigger: TGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGG...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTACATAGACCGGCGTaGACTCTGCCAGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: KEYGFRETPSGREGLDRAVHRPA*TLPAMS
Trigger: GGACATGGCTGGCAGAGTGCACGCCGGTCTATGTAC...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTAGTCCCGGTAGGCGATaGAGATGGTGCGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTSPGRR*RWCGGH
Trigger: ATGGCCTCCGCACCATCTGCATCGCCTACCGGGACT...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp AGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAGTCCCGGTAGGCGATaGAGATGGTGCGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RDTVWAGRTGQGGKERTESPGRR*RWCGGH
Trigger: ATGGCCTCCGCACCATCTGCATCGCCTACCGGGACT...TTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCGATGCCGCATTTGGCTaGGATGGCCCGGGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPDAAFG*DGPGRV
Trigger: AACACGGCCCGGGCCATCGCAGCCAAATGCGGCATC...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GCGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGGGACGCCTTTGACCAGTGTGTaGTTGTCGGTGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: AWSGRCRCLWRCCSGWGTPLTSV*LSVGDD
Trigger: GTCGTCTCCCACCGACAAGCACACACTGGTCAAAGG...CGTCCCCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GCGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGGGACGTGCTCCAATTATACCTaGTCCAGACCTGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AWSGRCRCLWRCCSGWGTCSNYT*SRPGAP
Trigger: GGGCGCTCCAGGTCTGGAGCAGGTATAATTGGAGCA...CGTCCCCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp ACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGCTGTGGCTGCGTCCCTaGCGTCATTCTCCCACCACC +
Preference number: 4 (lower is better)
Translates to: TSRWSTEDSSAFAKANSGLWLRP*RHSPTT
Trigger: GGTGGTGGGAGAATGACGGCAGGGACGCAGCCACAG...CCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GAGGCGCTCCTCGTTCTCGTCCACGTCCGTGTCGTCAATGAGCGGGATGTTGTGGCAAAACGTGACACCTaGAAGTGTGGAAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: EALLVLVHVRVVNERDVVAKRDT*KCGRQG
Trigger: CCCTTGCCTTCCACACTTGCAGGTGTCACGTTTTGC...CACAACATCCCGCTCATTGACGACACGGACGTGGACGAGAACGAGGAGCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GGGCGTGGCCATGAAGTTGTGAATGGAGGTCTTGGATTCTGGTTTCTCCAGGCCGCTGCTGCTGGGGCTTaGGGTGGAACTCGATGGAAC +
Preference number: 4 (lower is better)
Translates to: GRGHEVVNGGLGFWFLQAAAAGA*GGTRWN
Trigger: GTTCCATCGAGTTCCACCCCAAGCCCCAGCAGCAGC...GGCCTGGAGAAACCAGAATCCAAGACCTCCATTCACAACTTCATGGCCACGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGACATCCCGCTGCTGCTaGGGCTTGGGGTGGAACTCG +
Preference number: 4 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVTSRCC*GLGWNS
Trigger: CGAGTTCCACCCCAAGCCCCAGCAGCAGCGGGATGT...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCCCGCCAGGCCCTCTGTaGGTGAGGTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ANALPERSSATLVVPSFCPPGPL*VRSSAS
Trigger: GGAGGCTGAAGACCTCACCCACAGAGGGCCTGGCGG...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGAAGAGGCAGGCCCTCTaGGACAGCCACGACCAGCAC +
Preference number: 4 (lower is better)
Translates to: VLANALPERSSATLVVPSKRQAL*DSHDQH
Trigger: GTGCTGGTCGTGGCTGTCCCAGAGGGCCTGCCTCTT...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGTCCCTGCGATGCCCATaGCGAAGCCCACGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: NRKATVSGMQDCKREKAESLRCP*RSPRPP
Trigger: AGGCGGACGTGGGCTTCGCCATGGGCATCGCAGGGA...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTGCAGCAGCGACTCTGTaGGTGGCTCCGTCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LANALPERSSATLVVPSFAAATL*VAPSPG
Trigger: CCCTGGCGACGGAGCCACCCACAGAGTCGCTGCTGC...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGAAGATGATGGCGAGCTaGTACACGGCGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRKMMAS*YTAWPR
Trigger: TCTGGGCCACGCCGTGTACCAGCTCGCCATCATCTT...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAAATGGCGTTGTTGTTCTaGTTGGGGGACGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQMALLF*LGDGGG
Trigger: CCCGCCCCCGTCCCCCAACCAGAACAACAACGCCAT...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AAGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCGCGGGCTCCCGGGACTaGAGGAAAACACTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KPSEGASARWWFPFRSSVAGSRD*RKTLKR
Trigger: CCTCTTCAGTGTTTTCCTCCAGTCCCGGGAGCCCGC...GACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AAAGATTCCAGGTCATGGTACCCCGTTTCTGAACTCCACAGCACAGCACAAAGGGGCGGCTCCCTCAGGTaGCACCCTTCACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KDSRSWYPVSELHSTAQRGGSLR*HPSQAC
Trigger: GCAGGCCTGTGAAGGGTGCCACCTGAGGGAGCCGCC...CCTTTGTGCTGTGCTGTGGAGTTCAGAAACGGGGTACCATGACCTGGAATCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AGCGGGCTCCCGGGACTGGAGGAAAACACTGAAGAGGTAGCTGACTTGGTGACAGGCAAGGGTCCCCCATaGCATCACTGTGTGGACCTA +
Preference number: 4 (lower is better)
Translates to: SGLPGLEENTEEVADLVTGKGPP*HHCVDL
Trigger: TAGGTCCACACAGTGATGCCATGGGGGACCCTTGCC...TGTCACCAAGTCAGCTACCTCTTCAGTGTTTTCCTCCAGTCCCGGGAGCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGGCAGCTTTTAATATCTATTaGCCATTGGTCCTATCGGTG +
Preference number: 4 (lower is better)
Translates to: PPPPRTCAQLRLLSGLWAAFNIY*PLVLSV
Trigger: CACCGATAGGACCAATGGCCAATAGATATTAAAAGC...TGCCCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGGTGGAGTCTCCATCCTaGAGGACAGGGTGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELVESPS*RTGWGR
Trigger: CCGACCCCACCCTGTCCTCCAGGATGGAGACTCCAC...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp CCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGAGAGAAGGCCGAGCTaGGGAGGCTTATTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PSGREGLDRAVKKEQKSHERRPS*GGLFFP
Trigger: GGGGAAGAATAAGCCTCCCCAGCTCGGCCTTCTCTC...GTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GTGGGTGTAGTCATTGATCAGAAACTCGGGCGTGGCCATGAAGTTGTGAATGGACAGGCCCTCTGTGGGTaGGGTCTTCAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: VGVVIDQKLGRGHEVVNGQALCG*GLQPPA
Trigger: TGCCGGAGGCTGAAGACCTCACCCACAGAGGGCCTG...TCCATTCACAACTTCATGGCCACGCCCGAGTTTCTGATCAATGACTACACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGGGATCTTTGTCAGCTaGCTTGCGCACGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ASARWWFPFRSSVPQVPTGIFVS*LAHVVR
Trigger: TCTGACCACGTGCGCAAGTCAGCTGACAAAGATCCC...AGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGGGGATCTTTGTCAGCTaGCTTGCGCACGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: REGLDRAVKKEQKSHGERGIFVS*LAHVVR
Trigger: TCTGACCACGTGCGCAAGTCAGCTGACAAAGATCCC...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp AGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAGCACGGCTAGCTTTGTaGGCTTCCCCTGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: RDTVWAGRTGQGGKERTEARLAL*ASPEGQ
Trigger: CTGTCCTTCAGGGGAAGCTCACAAAGCTAGCCGTGC...TTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAATTTCAAGAGGATCTCTaGGGCCCCCTTGCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKFQEDL*GPLAEE
Trigger: CTCTTCAGCAAGGGGGCCTCAGAGATCCTCTTGAAA...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAAAGCCATCGGCTCGATaGTCTTCCTCACCATGTCGT +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKKPSAR*SSSPCR
Trigger: ACGACATGGTGAGGAAGATCATCGAGCCGATGGCTT...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTATAGTGGGGAGCAGCTaGAGGGCTTCCCGCCAAACT +
Preference number: 4 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGIVGSS*RASRQT
Trigger: AGTTTGGCGGGAAGCCCTTCAGCTGCTCCCCACTAT...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp ACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGTGGGGATGGTGGCAATaGCCTGTCCCCAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: TSRWSTEDSSAFAKANSGWGWWQ*PVPRPA
Trigger: AGCTGGTCTGGGGACAGGTCATTGCCACCATCCCCA...CCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp CAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTTGGGGATGGTGGCAATaGCCTGTCCCCAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: QKSHGERNARLQKREGRAWGWWQ*PVPRPA
Trigger: AGCTGGTCTGGGGACAGGTCATTGCCACCATCCCCA...AGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GAGCGGGATGTTGTGGGTGTAGTCATTGATCAGAAACTCGGGCGTGGCCATGAAGTGAGAAGAAGCCGGTaGGTGCAGCAGCACGCAGCT +
Preference number: 4 (lower is better)
Translates to: ERDVVGVVIDQKLGRGHEVRRSR*VQQHAA
Trigger: AGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCAC...TTCATGGCCACGCCCGAGTTTCTGATCAATGACTACACCCACAACATCCCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp AGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCGTCTACGACAGAGAGTaGGAAGAAGCCGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SLLRVPVHVGGFHSDPLSVYDRE*EEAGEC
Trigger: GCACTCACCGGCTTCTTCTCACTCTCTGTCGTAGAC...GGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GACATGGCATTCATGGGAATAGTGGGGATGACGCCTGCTCCTGTTTGGTTTTGTCACCCACGGTCCCAGTaGCCAGGCAAGGTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: DMAFMGIVGMTPAPVWFCHPRSQ*PGKVWR
Trigger: CCGCCAAACCTTGCCTGGGCACTGGGACCGTGGGTG...ACAAAACCAAACAGGAGCAGGCGTCATCCCCACTATTCCCATGAATGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTAGGCCTTCTCACAAGTaGAATCTTGGCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVRPSHK*NLGSAT
Trigger: TGTGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCT...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTTGGCCATGTCGCCCATaGTGCCTGTCAGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QKSHGERNARLQKREGRAWPCRP*CLSGLL
Trigger: GAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCA...AGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGGGGACATCCCGCTGCTaGTGGGGCTTGGGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: CKCPARKVFSHLSCSLVLGTSRC*WGLGWN
Trigger: GTTCCACCCCAAGCCCCAGCAGCAGCGGGATGTCCC...CAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTGCCCGTAGATCTGCCTaGGCTTCTCCAGGTCATTGG +
Preference number: 4 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTARRSA*ASPGHW
Trigger: CCAATGACCTGGAGAAGCGCAGGCAGATCTACGGGC...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGTGCTCAATTCGGCTCTaGAGGCCTCGGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRCSIRL*RPRNCF
Trigger: GAAGCAGTTCCGAGGCCTGCAGAGCCGAATTGAGCA...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAATTGTCTTCCGGGATCTaGTCGCGCACGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQLSSGI*SRTGWK
Trigger: CTTCCAGCCCGTGCGCGAGCAGATCCCGGAAGACAA...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGTCACAGCCACCACCTaGCGCTGCTCACCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPERSSATLVVPSFCRCAVTATT*RCSPVV
Trigger: CACCACTGGTGAGCAGCGGCAGGTGGTGGCTGTGAC...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GAACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGTCACAGCCACCACCTaGCGCTGCTCACCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: EQKSHGERNARLQKREGRVTATT*RCSPVV
Trigger: CACCACTGGTGAGCAGCGGCAGGTGGTGGCTGTGAC...TCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCACCGGCCCATCGTTGGTaGCATCCCCTGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LPERSSATLVVPSFCRCAPAHRW*HPLSQP
Trigger: TGGCTGTGACAGGGGATGGCACCAACGATGGGCCGG...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGAGGCCACGTCGGTCCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: FHKRIWLSRDTVWAGRTGGHVGP*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGGACCGACGTGGCC...TCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GCCAGGATACGCTCCCCTCAGGACCTGGTGCTGAGCCACAAATCCATGACTTCAGCGTGGTCAGGTAGATaGCGCTGTCTATGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: ARIRSPQDLVLSHKSMTSAWSGR*RCLWRC
Trigger: ACAACGCCATAGACAGCGGCATCTACCTGACCACGC...TGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGACCAGGTGCCCACACTaGCAGGATACGCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVTRCPH*QDTLPS
Trigger: TGAGGGGAGCGTATCCTGGCAGTGTGGGCACCTGGT...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGGGCTTGGCCACCAGGTaGCCACACTGCCAGGATACG +
Preference number: 4 (lower is better)
Translates to: NALPERSSATLVVPSFCRGLATR*PHCQDT
Trigger: CGTATCCTGGCAGTGTGGGCACCTGGTGGCCAAGCC...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGAGGGTGGGGTCGGGGTaGTCTGCTAACCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELRVGSG*SANPHC
Trigger: ACAGTGAGGGTTAGCAGAGCACCCCGACCCCACCCT...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp CCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTGATCCGCTCCAAGGATaGAAAGGCCTGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: PERSSATLVVPSFCRCAGDPLQG*KGLGTG
Trigger: CCCCGTGCCCAGGCCTTTCCATCCTTGGAGCGGATC...ACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGGCTGCTGCTGGGGCTTaGGGTGGAACTCGATGGAAC +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELAAAGA*GGTRWN
Trigger: GTTCCATCGAGTTCCACCCCAAGCCCCAGCAGCAGC...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGGGTCTTGGGTTGCTTTaGGGGGATGAAGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: REGLDRAVKKEQKSHGERGLGLL*GDEVLP
Trigger: GGGCAGAACTTCATCCCCCCAAAGCAACCCAAGACC...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTTGCCTGAGAGCAGCATaGGATCTTTGTCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVCLRAA*DLCQLT
Trigger: AGTCAGCTGACAAAGATCCCATGCTGCTCTCAGGCA...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGTCTTATTGCCCACCTaGCGTGGGAGGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPERSSATLVVPSFCRCAVLLPT*RGRAPS
Trigger: GGAAGGCGCCCTCCCACGCCAGGTGGGCAATAAGAC...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGGTCTTATTGCCCACCTaGCGTGGGAGGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: NRKATVSGMQDCKREKAEVLLPT*RGRAPS
Trigger: GGAAGGCGCCCTCCCACGCCAGGTGGGCAATAAGAC...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp CCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTATGGCGTTGTTGTTCTaGTTGGGGGACGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PERSSATLVVPSFCRCAGMALLF*LGDGGG
Trigger: CCCGCCCCCGTCCCCCAACCAGAACAACAACGCCAT...ACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCCAGCAGACATCAAGGTaGTCTACCGAGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFQQTSR*STEDSS
Trigger: CGAGGAGTCCTCGGTAGACCACCTTGATGTCTGCTG...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAAGGAACTTGGAGTCCTaGGAGGTGGAGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERRNLES*EVESPS
Trigger: GGATGGAGACTCCACCTCCCAGGACTCCAAGTTCCT...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCGAACCTTCCATGACATaGGTGCCTGAGAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: ARWWFPFRSSVPQVPTVSEPSMT*VPESSM
Trigger: CATGCTGCTCTCAGGCACTCATGTCATGGAAGGTTC...GGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGCACGGCTAGCTTTGTaGGCTTCCCCTGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLARLAL*ASPEGQ
Trigger: CTGTCCTTCAGGGGAAGCTCACAAAGCTAGCCGTGC...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCCGACAGCTATGCAGGTaGGGTCACCCACGACCTCAT +
Preference number: 4 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCRQLCR*GHPRPH
Trigger: ATGAGGTCGTGGGTGACCTCACCTGCATAGCTGTCG...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCTGCGGATCCGCCGGTTaGACTCCTTCCCTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: ANALPERSSATLVVPSFCCGSAG*TPSLLG
Trigger: GCCTAGAAGGGAAGGAGTTCAACCGGCGGATCCGCA...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGTTGAGAGGAGAGTCCTaGGTAATGCAGGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: REGLDRAVKKEQKSHGERLRGES*VMQAPV
Trigger: CACAGGTGCCTGCATTACTCAGGACTCTCCTCTCAA...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACATAGTGGGGAGCAGCTaGAGGGCTTCCCGCCAAACT +
Preference number: 4 (lower is better)
Translates to: TESEKKPVSAAARSSNFNIVGSS*RASRQT
Trigger: AGTTTGGCGGGAAGCCCTTCAGCTGCTCCCCACTAT...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCTGGGGATGGTGGCAATaGCCTGTCCCCAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: ANALPERSSATLVVPSFCWGWWQ*PVPRPA
Trigger: AGCTGGTCTGGGGACAGGTCATTGCCACCATCCCCA...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGGTGAGACAAGCCTTCTaGGGGTGCCAGTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: VLANALPERSSATLVVPSVRQAF*GCQCTL
Trigger: CAACGTGCACTGGCACCCTCAGAAGGCTTGTCTCAC...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp ACATGCGCACTGCGGATGTGCCTAGTTTTTGCAGAGGGCGGGTTGCTTTGTGGCATGGTACCCCGTTTCTaGACTCCACAGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: TCALRMCLVFAEGGLLCGMVPRF*TPQHST
Trigger: TGTGCTGTGCTGTGGAGTTCAGAAACGGGGTACCAT...GCCACAAAGCAACCCGCCCTCTGCAAAAACTAGGCACATCCGCAGTGCGCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGCTGAACCGCTTCTCTTaGAGGTACTCACTACCTCCA +
Preference number: 4 (lower is better)
Translates to: YGFRETPSGREGLDRAVKLNRFS*RYSLPP
Trigger: TGGAGGTAGTGAGTACCTTCAAGAGAAGCGGTTCAG...CTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCGGCGCACAGCACCCTaGACTGAACCGCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: NRKATVSGMQDCKREKAERRTAP*TEPLLL
Trigger: CAAGAGAAGCGGTTCAGTTCAGGGTGCTGTGCGCCG...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp TTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACGTCATGAAGCTGGCTaGGGACCGAAGACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: FHKRIWLSRDTVWAGRTGRHEAG*GPKTAG
Trigger: GCCGGCGGTCTTCGGTCCTCAGCCAGCTTCATGACG...TCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAAGATTGGTTACGTCATaGAGCTGGCTGAGGACCGAA +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKRLVTS*SWLRTE
Trigger: TTCGGTCCTCAGCCAGCTTCATGACGTAACCAATCT...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp AATACGTTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGGGGGGCCTGGAGGAATaGGTGAATGGGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NTFHKRIWLSRDTVWAGRGGLEE*VNGGLA
Trigger: GGCCAGGCCCCCATTCACTCATTCCTCCAGGCCCCC...CCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAACGTATT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp CGTGTCGTCAATGAGCGGGATGTTGTGGGTGTAGTCATTGATCAGAAACTCGGGTGGCCATGTCGCCCATaGTGCCTGTCAGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RVVNERDVVGVVIDQKLGWPCRP*CLSGLL
Trigger: GAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCA...CCCGAGTTTCTGATCAATGACTACACCCACAACATCCCGCTCATTGACGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp TTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGAGCAGCTCCGCCAGCGTaGACCCAAAGCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FHKRIWLSRDTVWAGRTGAAPPA*TQSLQP
Trigger: AGGCTGGAGGCTTTGGGTGCACGCTGGCGGAGCTGC...TCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GTAGTCATTGATCAGAAACTCGGGCGTGGCCATGAAGTTGTGAATGGAGGTCTTGGGACCTGGAGGAGCTaGCCGTTCCGGATGACCGTG +
Preference number: 4 (lower is better)
Translates to: VVIDQKLGRGHEVVNGGLGTWRS*PFRMTV
Trigger: CACGGTCATCCGGAACGGGCAGCTCCTCCAGGTCCC...AAGACCTCCATTCACAACTTCATGGCCACGCCCGAGTTTCTGATCAATGACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGGTACATAGACCGGCGTaGACTCTGCCAGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVVHRPA*TLPAMS
Trigger: GGACATGGCTGGCAGAGTGCACGCCGGTCTATGTAC...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGTACATAGACCGGCGTaGACTCTGCCAGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: TESEKKPVSAAARSSNFNVHRPA*TLPAMS
Trigger: GGACATGGCTGGCAGAGTGCACGCCGGTCTATGTAC...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTTCTGAATCCCGAAAGTaGCCAAAACGATGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVSESRK*PKRWCR
Trigger: TCTGCACCATCGTTTTGGGCACTTTCGGGATTCAGA...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCGAGCCTGTGGCAGGCTaGACCCTTGTTGAATGGATT +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFEPVAG*TLVEWI
Trigger: AATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTC...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCAGTGGCTGAGCCCCCACAACTCCAAGAGTaGTTCATGCTCTTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SIPILCPSGPNCLPVAEPPQLQE*FMLLKV
Trigger: CACCTTCAAGAGCATGAAGCACTCTTGGAGTTGTGG...GGGCTCAGCCACTGGGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCGGACTCCTCGGCATTTaGCAAAGCAAACAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFGLLGI*QSKQWE
Trigger: CTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCC...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GACATGCGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGCTAGGGTGGGAAGAGTaGTTTGGTGGTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: DMRGQVDAAVYGVVVLVGLGWEE*FGGGTS
Trigger: AGAGGTGCCACCACCAAAGCACTCTTCCCACCCTAG...CCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACGCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGACTCGATGGAACTATTaGCCATGTCGCCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRTRWNY*PCRPCC
Trigger: GCAGCATGGGCGACATGGCCAATAGTTCCATCGAGT...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACATGGGGTGGAACTCGATaGAACTATTGGCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: SRDTVWAGRTGQGGKERTWGGTR*NYWPCR
Trigger: GCGACATGGCCAATAGTTCCATCGAGTTCCACCCCA...TGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGTGCTGGGGCTTGGGGTaGAACTCGATGGAACTATTG +
Preference number: 4 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRCWGLG*NSMELL
Trigger: CAATAGTTCCATCGAGTTCCACCCCAAGCCCCAGCA...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GTCAATGAGCGGGATGTTGTGGGTGTAGTCATTGATCAGAAACTCGGGCGTGGCGCTTCTCCAGGTCATTaGTGTTGTCCGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VNERDVVGVVIDQKLGRGASPGH*CCPPGP
Trigger: AGGGCCTGGCGGACAACACCAATGACCTGGAGAAGC...GCCACGCCCGAGTTTCTGATCAATGACTACACCCACAACATCCCGCTCATTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACGGTCTTGGGTTGCTTTaGGGGGATGAAGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: FAGVQVPICVCACMCACDGLGLL*GDEVLP
Trigger: GGGCAGAACTTCATCCCCCCAAAGCAACCCAAGACC...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTTCACTCTCCTCTCCTaGCGGCGCATAGAACGAGAG +
Preference number: 4 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTFTLLS*RRIERE
Trigger: CTCTCGTTCTATGCGCCGCCAGGAGAGGAGAGTGAA...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGAGAGCACGCCGTCGGCTaGCAGCAGGTCGCCGTACTT +
Preference number: 4 (lower is better)
Translates to: FHKRIWLSRDTVWAGRTGEHAVG*QQVAVL
Trigger: AAGTACGGCGACCTGCTGCCAGCCGACGGCGTGCTC...TCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAAAGATGATGCCTGTCTaGGAATTCACGCCAACGGCG +
Preference number: 4 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERKMMPV*EFTPTA
Trigger: CGCCGTTGGCGTGAATTCCCAGACAGGCATCATCTT...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTCTGGCTACTCTCCATaGCCCCATCCTGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVSGYSP*PHPAAC
Trigger: GCAAGCAGCAGGATGGGGCCATGGAGAGTAGCCAGA...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349466.6
CDS-3UTR CCA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCAAGATGATGGCGAGCTaGTACACGGCGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPKMMAS*YTAWPR
Trigger: TCTGGGCCACGCCGTGTACCAGCTCGCCATCATCTT...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGAAGATGATGGCGAGCTaGTACACGGCGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELKMMAS*YTAWPR
Trigger: TCTGGGCCACGCCGTGTACCAGCTCGCCATCATCTT...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGGAGGTCTTGGATTCTaGTTTCTCCAGGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVGGLGF*FLQAFI
Trigger: TATGAAGGCCTGGAGAAACCAGAATCCAAGACCTCC...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TCCTCTTCCTCCTTTTCCTCCTCCCTGTCCTCGTCTTCCTCAGTCCGGATGAGGGGGTTTTCTCCTCTCTaGCAGGGGTCTCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: SSSSFSSSLSSSSSVRMRGFSPL*QGSQCK
Trigger: TTTGCACTGAGACCCCTGCCAGAGAGGAGAAAACCC...CCTCATCCGGACTGAGGAAGACGAGGACAGGGAGGAGGAAAAGGAGGAAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAACCAACTGTCTCCCAGTaGCTGAGCCCAAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQPTVSQ*LSPRPK
Trigger: TTTGGGCCTTGGGCTCAGCCACTGGGAGACAGTTGG...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACGGTGCCAGTGCACGTTaGTGGTTTCCATTCCGATCC +
Preference number: 4 (lower is better)
Translates to: FAGVQVPICVCACMCACDGASAR*WFPFRS
Trigger: GGATCGGAATGGAAACCACCAACGTGCACTGGCACC...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GCGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGGGACGCTGTTTGGTTTTGTGTaGATGCCGGTGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: AWSGRCRCLWRCCSGWGTLFGFV*MPVEVR
Trigger: TCTCACCTCCACCGGCATCCACACAAAACCAAACAG...CGTCCCCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CGCCCCCTCTCGGCCTTCTCCTTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGAAGACCCTCAACAAATaGAGTTGCCCTTTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: RPLSAFSLGISVGPGRGQKTLNK*SCPFSY
Trigger: ATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTT...CTGCCCTCTGCCCGGCCCTACTGAGATTCCCAAGGAGAAGGCCGAGAGGGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGGGGATCTTTGTCAGCTaGCTTGCGCACGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ARKVFSHLSCSLVLQVCRGIFVS*LAHVVR
Trigger: TCTGACCACGTGCGCAAGTCAGCTGACAAAGATCCC...CCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAACCTTCCATGACATaGGTGCCTGAGAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGEPSMT*VPESSM
Trigger: CATGCTGCTCTCAGGCACTCATGTCATGGAAGGTTC...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp CCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACTTCCAGAACCTTCCATaGCATGAGTGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PSGREGLDRAVKKEQKSHFQNLP*HECLRA
Trigger: TGCTCTCAGGCACTCATGTCATGGAAGGTTCTGGAA...GTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCAAGCCATCGGCTCGATaGTCTTCCTCACCATGTCGT +
Preference number: 4 (lower is better)
Translates to: QDLVLSHKSMTSWLKLGRKPSAR*SSSPCR
Trigger: ACGACATGGTGAGGAAGATCATCGAGCCGATGGCTT...GCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGTCACAGCCACCACATTaGCCGTCAGTTGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: REGLDRAVKKEQKSHGERSQPPH*PSVETA
Trigger: TGCAGTTTCAACTGACGGTCAATGTGGTGGCTGTGA...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGCGCCAAACTGGACGATaGCAATCTGAATCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: REGLDRAVKKEQKSHGERRQTGR*QSESRK
Trigger: CTTTCGGGATTCAGATTGTCATCGTCCAGTTTGGCG...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGATAGTGGGGAGCAGCTaGAGGGCTTCCCGCCAAACT +
Preference number: 4 (lower is better)
Translates to: NALPERSSATLVVPSFCRIVGSS*RASRQT
Trigger: AGTTTGGCGGGAAGCCCTTCAGCTGCTCCCCACTAT...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTAGATTGGTTACGTCATaGAGCTGGCTGAGGACCGAA +
Preference number: 4 (lower is better)
Translates to: ASARWWFPFRSSVPQVPTRLVTS*SWLRTE
Trigger: TTCGGTCCTCAGCCAGCTTCATGACGTAACCAATCT...AGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCTGCAAGTGTGGAAGGCCTTCTCACAAGTaGAATCTTGGCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LSPRPKHLPAKRDTCKCGRPSHK*NLGSAT
Trigger: TGTGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCT...TCCACACTTGCAGGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGGCCCGTAGATCTGCCTaGGCTTCTCCAGGTCATTGG +
Preference number: 4 (lower is better)
Translates to: NRKATVSGMQDCKREKAEARRSA*ASPGHW
Trigger: CCAATGACCTGGAGAAGCGCAGGCAGATCTACGGGC...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGTGCTCAATTCGGCTCTaGAGGCCTCGGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELCSIRL*RPRNCF
Trigger: GAAGCAGTTCCGAGGCCTGCAGAGCCGAATTGAGCA...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCCTTTGTCAGCTGACTTaGGCACGTGGTCAGACTCGC +
Preference number: 4 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPLCQLT*ARGQTR
Trigger: GCGAGTCTGACCACGTGCGCAAGTCAGCTGACAAAG...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TGTGCGCATGTGCTGAGACAAGTTCTTGTTAGAGGGACGTCTCCACGCTGTGGACTTTGTCAGCTGACTTaGGCACGTGGTCAGACTCGC +
Preference number: 4 (lower is better)
Translates to: CAHVLRQVLVRGTSPRCGLCQLT*ARGQTR
Trigger: GCGAGTCTGACCACGTGCGCAAGTCAGCTGACAAAG...TCCACAGCGTGGAGACGTCCCTCTAACAAGAACTTGTCTCAGCACATGCGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GGGCGTGGCCATGAAGTTGTGAATGGAGGTCTTGGATTCTGGTTTCTCCAGGCCCATCTCCATGGCCACTaGACCATCCTGCTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: GRGHEVVNGGLGFWFLQAHLHGH*TILLLS
Trigger: GCTAAGAAGCAGGATGGTGCAGTGGCCATGGAGATG...GGCCTGGAGAAACCAGAATCCAAGACCTCCATTCACAACTTCATGGCCACGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAACATCTCCATGGCCACTaGACCATCCTGCTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: RDTVWAGRTGQGGKERTEHLHGH*TILLLS
Trigger: GCTAAGAAGCAGGATGGTGCAGTGGCCATGGAGATG...TTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGCCTGCTTTCCCGATCTaGACGGCTAGCTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELPAFPI*TASFVS
Trigger: GCTCACAAAGCTAGCCGTGCAGATCGGGAAAGCAGG...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGCCTTTGACCAGTGTGTaGTTGTCGGTGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVPLTSV*LSVGDD
Trigger: GTCGTCTCCCACCGACAAGCACACACTGGTCAAAGG...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp AGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTGCCTTTGACCAGTGTGTaGTTGTCGGTGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: RKATVSGMQDCKREKAELPLTSV*LSVGDD
Trigger: GTCGTCTCCCACCGACAAGCACACACTGGTCAAAGG...CAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCTTCACCCACAACATCTaGACGGCTTTGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFFTHNI*TALRGE
Trigger: CTCTCCTCTCAAAGCCGTGCAGATGTTGTGGGTGAA...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GATACGCTCCCCTCAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTGTTGTTCCCTCGTTTTaGAGGTGTGCAGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: DTLPSGPGAEPQIHDFMAVVPSF*RCAGPH
Trigger: ATGGGGACCTGCACACCTGCAAAACGAGGGAACAAC...AGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCTCCTTGCAAATGCCCTaGCAGAAAGGTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ARWWFPFRSSVPQVPTVSSLQMP*QKGLQP
Trigger: TGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGA...GGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTTGCTGGGGCTTGGGGTaGAACTCGATGGAACTATTG +
Preference number: 4 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGCWGLG*NSMELL
Trigger: CAATAGTTCCATCGAGTTCCACCCCAAGCCCCAGCA...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTGCTGCTGCTGGGGCTTaGGGTGGAACTCGATGGAAC +
Preference number: 4 (lower is better)
Translates to: LANALPERSSATLVVPSFAAAGA*GGTRWN
Trigger: GTTCCATCGAGTTCCACCCCAAGCCCCAGCAGCAGC...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AATACGTTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGCCGCCAGGCCCTCTGTaGGTGAGGTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: NTFHKRIWLSRDTVWAGRPPGPL*VRSSAS
Trigger: GGAGGCTGAAGACCTCACCCACAGAGGGCCTGGCGG...CCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAACGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCGCTTCTCCAGGTCATTaGTGTTGTCCGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ANALPERSSATLVVPSFCASPGH*CCPPGP
Trigger: AGGGCCTGGCGGACAACACCAATGACCTGGAGAAGC...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCTGCCTGAGAGCAGCATaGGATCTTTGTCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: SLLRVPVHVGGFHSDPLSCLRAA*DLCQLT
Trigger: AGTCAGCTGACAAAGATCCCATGCTGCTCTCAGGCA...GGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGATGCCTGAGAGCAGCATaGGATCTTTGTCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERCLRAA*DLCQLT
Trigger: AGTCAGCTGACAAAGATCCCATGCTGCTCTCAGGCA...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCTTCTTAGCTTTGGTCTaGCTACTCTCCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: AGVQVPICVCACMCACDFFLALV*LLSMAP
Trigger: TGGGGCCATGGAGAGTAGCCAGACCAAAGCTAAGAA...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349466.6
CDS-3UTR CCA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAGTGATGCCAGCACGCTaGCATTTTCGGATAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERVMPAR*HFRIAS
Trigger: TGAAGCTATCCGAAAATGCCAGCGTGCTGGCATCAC...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp TCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCCAGTGGCTGAGCCCCTTGTTGAATGGATTTaGGTCCTTGCAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: SIPILCPSGPNCLPVAEPLVEWI*VLANAL
Trigger: CAGGGCATTTGCAAGGACCCAAATCCATTCAACAAG...GGGCTCAGCCACTGGGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTCGGATGAGGAGCCTGTaGCAGGCTGCACCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LANALPERSSATLVVPSFRMRSL*QAAPLL
Trigger: CAACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCG...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCCTGATTGCCCCTGCATaGGTGCAACAAAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLLIAPA*VQQKLP
Trigger: GGGGAGCTTTTGTTGCACCCATGCAGGGGCAATCAG...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCCCCTTTGCTCATTTaGGGGAAACTGAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTSPLLI*GKLRLG
Trigger: GCCAAGCCTCAGTTTCCCCCAAATGAGCAAAGGGGA...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGTGGAGTCCTGGGAGGTaGAGTCTCCATCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NRKATVSGMQDCKREKAEWSPGR*SLHPGG
Trigger: TCCTCCAGGATGGAGACTCCACCTCCCAGGACTCCA...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
3UTR CAA 72 bp TGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTaGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: WQAAPLLNGFGS*QMPCQKGLQPP
Trigger: AGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
3UTR CAA 72 bp AGACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTaGCCAAAGCAAACAGTGGGAGTCCATCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RHQGGLPRTPRH*PKQTVGVHPGA
Trigger: AGCACCTGGATGGACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
CDS-3UTR TCA 90 bp GACATGCGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGCATGACATGAGTGCCTaGGAGCAGCATGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: DMRGQVDAAVYGVVVLVGHDMSA*EQHGIF
Trigger: AAAGATCCCATGCTGCTCTCAGGCACTCATGTCATG...CCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACGCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCGAACCTTCCATGACATaGGTGCCTGAGAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPEPSMT*VPESSM
Trigger: CATGCTGCTCTCAGGCACTCATGTCATGGAAGGTTC...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTTCCAGAACCTTCCATaGCATGAGTGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTFQNLP*HECLRA
Trigger: TGCTCTCAGGCACTCATGTCATGGAAGGTTCTGGAA...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCTTTCAAGAGGATCTCTaGGGCCCCCTTGCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPFQEDL*GPLAEE
Trigger: CTCTTCAGCAAGGGGGCCTCAGAGATCCTCTTGAAA...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GAGCGGGATGTTGTGGGTGTAGTCATTGATCAGAAACTCGGGCGTGGCCATGAATTTCAAGAGGATCTCTaGGGCCCCCTTGCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: ERDVVGVVIDQKLGRGHEFQEDL*GPLAEE
Trigger: CTCTTCAGCAAGGGGGCCTCAGAGATCCTCTTGAAA...TTCATGGCCACGCCCGAGTTTCTGATCAATGACTACACCCACAACATCCCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGAAGCCATCGGCTCGATaGTCTTCCTCACCATGTCGT +
Preference number: 4 (lower is better)
Translates to: ARKVFSHLSCSLVLQVCRKPSAR*SSSPCR
Trigger: ACGACATGGTGAGGAAGATCATCGAGCCGATGGCTT...CCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACGTCTCACAGCCACCACATTaGCCGTCAGTTGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: ESEKKPVSAAARSSNFNVSQPPH*PSVETA
Trigger: TGCAGTTTCAACTGACGGTCAATGTGGTGGCTGTGA...GACGTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAAAGGCTGCACCCTTGTTaGATGGATTTGGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQRLHPC*MDLGPC
Trigger: GCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCT...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGATGAAGATGCTGATCTaGTTGCCCCTGCATGGGTGC +
Preference number: 4 (lower is better)
Translates to: VLANALPERSSATLVVPSMKMLI*LPLHGC
Trigger: GCACCCATGCAGGGGCAATCAGATCAGCATCTTCAT...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTGGTGGTGGCACCTCTaGTGTCACAGCAGACATCAA +
Preference number: 4 (lower is better)
Translates to: VLANALPERSSATLVVPSWWWHL*CHSRHQ
Trigger: TTGATGTCTGCTGTGACATCAGAGGTGCCACCACCA...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTCCCTCACTGTCTTCATaGATGCAACAGGCTATAGGG +
Preference number: 4 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGPSLSS*MQQAIG
Trigger: CCCTATAGCCTGTTGCATTCATGAAGACAGTGAGGG...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTCCATGTCGCCCATGCTaGCTGTCAGGCCTTCTCACA +
Preference number: 4 (lower is better)
Translates to: LANALPERSSATLVVPSFPCRPC*LSGLLT
Trigger: TGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGG...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TTCTTTTCTAACCGAAATTCTTTTGCCCAAGATTTGACTGCTTCTGCTCAGGGGGCCTCCTCGATCTTCTaGAGCGCCTCGGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: FFSNRNSFAQDLTASAQGASSIF*SASAPR
Trigger: GCGAGGGGCCGAGGCGCTGCAGAAGATCGAGGAGGC...CCCCTGAGCAGAAGCAGTCAAATCTTGGGCAAAAGAATTTCGGTTAGAAAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTTTGTCAGCTGACTTaGGCACGTGGTCAGACTCGC +
Preference number: 4 (lower is better)
Translates to: NRKATVSGMQDCKREKAELCQLT*ARGQTR
Trigger: GCGAGTCTGACCACGTGCGCAAGTCAGCTGACAAAG...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGCATCTCCATGGCCACTaGACCATCCTGCTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: VLANALPERSSATLVVPSHLHGH*TILLLS
Trigger: GCTAAGAAGCAGGATGGTGCAGTGGCCATGGAGATG...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGAGTCTTCACCCACAACATCTaGACGGCTTTGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QGGLPRTPRHLPKQTVGVFTHNI*TALRGE
Trigger: CTCTCCTCTCAAAGCCGTGCAGATGTTGTGGGTGAA...GACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGATCTGAATCCCGAAAGTaGCCAAAACGATGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERSESRK*PKRWCR
Trigger: TCTGCACCATCGTTTTGGGCACTTTCGGGATTCAGA...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TATAAAGAGGGGCTTCCCAATGAGACAGGGCCCCCAGCCTTGAAGACTGCAAAATGCGCACTGCGGATGTaGCTAGTTTTTGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: YKEGLPNETGPPALKTAKCALRM*LVFAEG
Trigger: GCCCTCTGCAAAAACTAGGCACATCCGCAGTGCGCA...TTTTGCAGTCTTCAAGGCTGGGGGCCCTGTCTCATTGGGAAGCCCCTCTTTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CTGAGCCCAAGGCCCAAACACCTCCCTGCAAAACGTGACACCTGCAAGTGTGGAGGGTCTCAGTGCAAATaGTCCAATTATACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSPRPKHLPAKRDTCKCGGSQCK*SNYTCS
Trigger: GGAGCAGGTATAATTGGAGCATTTGCACTGAGACCC...TCCACACTTGCAGGTGTCACGTTTTGCAGGGAGGTGTTTGGGCCTTGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTGCCCAAGATTTGACTaGTTCTGCTCAGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: FAGVQVPICVCACMCACDCPRFD*FCSGVT
Trigger: TGTCACCCCTGAGCAGAAGCAGTCAAATCTTGGGCA...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTGGGGTGGAACTCGATaGAACTATTGGCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: ARKVFSHLSCSLVLQVCRWGGTR*NYWPCR
Trigger: GCGACATGGCCAATAGTTCCATCGAGTTCCACCCCA...CCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TGTGCGCATGTGCTGAGACAAGTTCTTGTTAGAGGGACGTCTCCACGCTGTGGATGGGGTGGAACTCGATaGAACTATTGGCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: CAHVLRQVLVRGTSPRCGWGGTR*NYWPCR
Trigger: GCGACATGGCCAATAGTTCCATCGAGTTCCACCCCA...TCCACAGCGTGGAGACGTCCCTCTAACAAGAACTTGTCTCAGCACATGCGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTGCTGGGGCTTGGGGTaGAACTCGATGGAACTATTG +
Preference number: 4 (lower is better)
Translates to: ARKVFSHLSCSLVLQVCRCWGLG*NSMELL
Trigger: CAATAGTTCCATCGAGTTCCACCCCAAGCCCCAGCA...CCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTTCACTCTCCTCTCCTaGCGGCGCATAGAACGAGAG +
Preference number: 4 (lower is better)
Translates to: NALPERSSATLVVPSFCRFTLLS*RRIERE
Trigger: CTCTCGTTCTATGCGCCGCCAGGAGAGGAGAGTGAA...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAAAAGATGATGCCTGTCTaGGAATTCACGCCAACGGCG +
Preference number: 4 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQKMMPV*EFTPTA
Trigger: CGCCGTTGGCGTGAATTCCCAGACAGGCATCATCTT...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTGTGATGCCAGCACGCTaGCATTTTCGGATAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTVMPAR*HFRIAS
Trigger: TGAAGCTATCCGAAAATGCCAGCGTGCTGGCATCAC...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GATACGCTCCCCTCAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTGTGATGCCAGCACGCTaGCATTTTCGGATAGCTTCA +
Preference number: 4 (lower is better)
Translates to: DTLPSGPGAEPQIHDFMAVMPAR*HFRIAS
Trigger: TGAAGCTATCCGAAAATGCCAGCGTGCTGGCATCAC...AGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGGAGGTCTTGGATTCTaGTTTCTCCAGGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: ASARWWFPFRSSVPQVPTGGLGF*FLQAFI
Trigger: TATGAAGGCCTGGAGAAACCAGAATCCAAGACCTCC...AGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCCATGACATGAGTGCCTaGGAGCAGCATGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCHDMSA*EQHGIF
Trigger: AAAGATCCCATGCTGCTCTCAGGCACTCATGTCATG...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTTGAGAGGAGAGTCCTaGGTAATGCAGGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: NALPERSSATLVVPSFCRLRGES*VMQAPV
Trigger: CACAGGTGCCTGCATTACTCAGGACTCTCCTCTCAA...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCTTGAGAGGAGAGTCCTaGGTAATGCAGGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: ANALPERSSATLVVPSFCLRGES*VMQAPV
Trigger: CACAGGTGCCTGCATTACTCAGGACTCTCCTCTCAA...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGCGCCAAACTGGACGATaGCAATCTGAATCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVRQTGR*QSESRK
Trigger: CTTTCGGGATTCAGATTGTCATCGTCCAGTTTGGCG...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTACTCGGGCGTGGCCATaGAGTTGTGAATGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LANALPERSSATLVVPSFTRAWP*SCEWRS
Trigger: AGACCTCCATTCACAACTTCATGGCCACGCCCGAGT...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCCGTGTGCGCATGTGCTaGGACAAGTTCTTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLRVRMC*DKFLLE
Trigger: CTCTAACAAGAACTTGTCTCAGCACATGCGCACACG...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp ACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGCGTGTGCGCATGTGCTaGGACAAGTTCTTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: TSRWSTEDSSAFAKANSGRVRMC*DKFLLE
Trigger: CTCTAACAAGAACTTGTCTCAGCACATGCGCACACG...CCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGGCTTCTGCTCAGGGGTaGCATGGCATTCATGGGAAT +
Preference number: 4 (lower is better)
Translates to: NALPERSSATLVVPSFCRASAQG*HGIHGN
Trigger: ATTCCCATGAATGCCATGTCACCCCTGAGCAGAAGC...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GAACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAACAGAAAAGCCACGGTaGGCGGAATGCAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: EQKSHGERNARLQKREGRTEKPR*AECKTA
Trigger: TGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGT...TCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGCTTCTCCTTTTTGGGTaGGTTGGCTTTCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: REGLDRAVKKEQKSHGERLLLFG*VGFLLL
Trigger: GAGAAGAAGAAAGCCAACGCACCCAAAAAGGAGAAG...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCCTGCTTTCCCGATCTaGACGGCTAGCTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: CKCPARKVFSHLSCSLVLPAFPI*TASFVS
Trigger: GCTCACAAAGCTAGCCGTGCAGATCGGGAAAGCAGG...CAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp TATAAAGAGGGGCTTCCCAATGAGACAGGGCCCCCAGCCTTGAAGACTGCAAAACCCGGAGTTCGCCATTaGTGTTCAAGATGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: YKEGLPNETGPPALKTAKPGVRH*CSRCWC
Trigger: GCACCAACATCTTGAACAGCAATGGCGAACTCCGGG...TTTTGCAGTCTTCAAGGCTGGGGGCCCTGTCTCATTGGGAAGCCCCTCTTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GAACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGACCCGGAGTTCGCCATTaGTGTTCAAGATGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: EQKSHGERNARLQKREGRPGVRH*CSRCWC
Trigger: GCACCAACATCTTGAACAGCAATGGCGAACTCCGGG...TCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCTGAATCCCGAAAGTaGCCAAAACGATGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTSESRK*PKRWCR
Trigger: TCTGCACCATCGTTTTGGGCACTTTCGGGATTCAGA...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTGCGTGGTCAGGTAGATaGCGCTGTCTATGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: LANALPERSSATLVVPSFAWSGR*RCLWRC
Trigger: ACAACGCCATAGACAGCGGCATCTACCTGACCACGC...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTGTTGTTCCCTCGTTTTaGAGGTGTGCAGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PERSSATLVVPSFCRCAGVVPSF*RCAGPH
Trigger: ATGGGGACCTGCACACCTGCAAAACGAGGGAACAAC...ACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCTCCTTGCAAATGCCCTaGCAGAAAGGTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLSLQMP*QKGLQP
Trigger: TGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGA...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCGATGTGCCTAGTTTTTaGAGAGGGCGGGTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPDVPSF*RGRVAL
Trigger: CAAAGCAACCCGCCCTCTGCAAAAACTAGGCACATC...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCAGTGGGGATGACGCCTaGTCCTGTTTGGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLSGDDA*SCLVLC
Trigger: ACACAAAACCAAACAGGAGCAGGCGTCATCCCCACT...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCCCTTTTTGGGTGCGTTaGCTTTCTTCTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCPFWVR*LSSSPA
Trigger: AGCGGGAGAAGAAGAAAGCCAACGCACCCAAAAAGG...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GAGCGGGATGTTGTGGGTGTAGTCATTGATCAGAAACTCGGGCGTGGCCATGAAAGATGCCGCTGTCTATaGCGTTGTTGTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ERDVVGVVIDQKLGRGHERCRCL*RCCSGW
Trigger: CCAACCAGAACAACAACGCCATAGACAGCGGCATCT...TTCATGGCCACGCCCGAGTTTCTGATCAATGACTACACCCACAACATCCCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AGGATGTGGAATTGGAGTAGGAACCAAAGAAAGCTGAAAACGAAACTCCCCTTTGGGCGGGTTGCTTTGTaGCTGCAGGGCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RMWNWSRNQRKLKTKLPFGRVAL*LQGRLQ
Trigger: CTGCAAGCGGCCCTGCAGCCACAAAGCAACCCGCCC...AAAGGGGAGTTTCGTTTTCAGCTTTCTTTGGTTCCTACTCCAATTCCACATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CACACATGCGCACTGCGGATGTGCCTAGTTTTTGCAGAGGGCGGGTTGCTTTGTTCCCTCTCCCTCCATTaGCTTCTTTTGAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: HTCALRMCLVFAEGGLLCSLSLH*LLLNSW
Trigger: CCAAGAGTTCAAAAGAAGCCAATGGAGGGAGAGGGA...ACAAAGCAACCCGCCCTCTGCAAAAACTAGGCACATCCGCAGTGCGCATGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp TCCCTTGAAAGGGTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAACTTAAGCTTGGCCGCTaGACACAAAGACTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLERVFSSLAGVSVQMLQLKLGR*TQRLGW
Trigger: CCACCCTAGTCTTTGTGTCCAGCGGCCAAGCTTAAG...TTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAACCCTTTCAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGTCTCCAAAGATTCCAGGTCATaGTACCCCGTTTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: ARWWFPFRSSVPQVPTVSKDSRS*YPVSEL
Trigger: GAGTTCAGAAACGGGGTACCATGACCTGGAATCTTT...GGAGACAGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGCTTTGAGACACGTGGTATaGAGTCGGCAGGAAGTCTAC +
Preference number: 4 (lower is better)
Translates to: QKSHGERNARLQKREGRALRHVV*SRQEVY
Trigger: GTAGACTTCCTGCCGACTCCATACCACGTGTCTCAA...AGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GAACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGACATGACATGAGTGCCTaGGAGCAGCATGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: EQKSHGERNARLQKREGRHDMSA*EQHGIF
Trigger: AAAGATCCCATGCTGCTCTCAGGCACTCATGTCATG...TCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCTCACAGCCACCACATTaGCCGTCAGTTGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: ANALPERSSATLVVPSFCSQPPH*PSVETA
Trigger: TGCAGTTTCAACTGACGGTCAATGTGGTGGCTGTGA...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp AGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAGGCAAATGTGTCCATaGTCAAGTTCACCCACAACA +
Preference number: 4 (lower is better)
Translates to: RDTVWAGRTGQGGKERTERQMCP*SSSPTT
Trigger: TGTTGTGGGTGAACTTGATCATGGACACATTTGCCT...TTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTAGGCTGCACCCTTGTTaGATGGATTTGGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LANALPERSSATLVVPSFRLHPC*MDLGPC
Trigger: GCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCT...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCACTGAACCGCTTCTCTTaGAGGTACTCACTACCTCCA +
Preference number: 4 (lower is better)
Translates to: LPERSSATLVVPSFCRCALNRFS*RYSLPP
Trigger: TGGAGGTAGTGAGTACCTTCAAGAGAAGCGGTTCAG...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGGCAGAGAGAATTGCGTaGGTAGGGGTAGAAAGATTG +
Preference number: 4 (lower is better)
Translates to: VLANALPERSSATLVVPSAERIA*VGVERL
Trigger: CAATCTTTCTACCCCTACTCACGCAATTCTCTCTGC...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GAACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAAGGCCTTCTCACAAGTaGAATCTTGGCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: EQKSHGERNARLQKREGRRPSHK*NLGSAT
Trigger: TGTGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCT...TCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCATGGCCCCATCCTGCTaGTTGCCTTTCTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCMAPSC*LPFLSF
Trigger: GAAAGATAAGAAAGGCAAGCAGCAGGATGGGGCCAT...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349466.6
CDS-3UTR GCA 90 bp TGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCCCGGAGTTCGCCATTaGTGTTCAAGATGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CKCPARKVFSHLSCSLVLPGVRH*CSRCWC
Trigger: GCACCAACATCTTGAACAGCAATGGCGAACTCCGGG...CAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGTTCACCCACAACATCTaGACGGCTTTGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: NRKATVSGMQDCKREKAEFTHNI*TALRGE
Trigger: CTCTCCTCTCAAAGCCGTGCAGATGTTGTGGGTGAA...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp GTAGTCATTGATCAGAAACTCGGGCGTGGCCATGAAGTTGTGAATGGAGGTCTTATGCACGCACACACATaGGCACTGCGGATGTGCCTA +
Preference number: 4 (lower is better)
Translates to: VVIDQKLGRGHEVVNGGLMHAHT*ALRMCL
Trigger: TAGGCACATCCGCAGTGCGCATGTGTGTGCGTGCAT...AAGACCTCCATTCACAACTTCATGGCCACGCCCGAGTTTCTGATCAATGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AATACGTTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGGCTTCTCCAGGTCATTaGTGTTGTCCGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: NTFHKRIWLSRDTVWAGRASPGH*CCPPGP
Trigger: AGGGCCTGGCGGACAACACCAATGACCTGGAGAAGC...CCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAACGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp GAACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGACCTTTTTGGGTGCGTTaGCTTTCTTCTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: EQKSHGERNARLQKREGRPFWVR*LSSSPA
Trigger: AGCGGGAGAAGAAGAAAGCCAACGCACCCAAAAAGG...TCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAATGCTGTTCAAGATGTTaGTGCACTTTTTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GFRETPSGREGLDRAVKKCCSRC*CTFSRG
Trigger: TCCTCTTGAAAAAGTGCACCAACATCTTGAACAGCA...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCTGTGAATGGAGGTCTTaGATTCTGGTTTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLCEWRS*ILVSPG
Trigger: GCCTGGAGAAACCAGAATCCAAGACCTCCATTCACA...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp CCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTAGATGCCGCTGTCTATaGCGTTGTTGTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PERSSATLVVPSFCRCAGRCRCL*RCCSGW
Trigger: CCAACCAGAACAACAACGCCATAGACAGCGGCATCT...ACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCACACAAAGACTAGGGTaGGAAGAGTGCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLTQRLG*EECFGG
Trigger: ACCACCAAAGCACTCTTCCCACCCTAGTCTTTGTGT...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp ACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGAAATCCATGACTTCATaGCTTAAGCTTGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TSRWSTEDSSAFAKANSGKSMTS*LKLGRW
Trigger: CCAGCGGCCAAGCTTAAGCCATGAAGTCATGGATTT...CCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
3UTR CAA 72 bp AGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTaGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: RKVFSHLSCSLV*QVCRSPYVCVR
Trigger: ACGCACACACACATATGGGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263519.4
ENST00000349466.6
ENST00000359149.7
ENST00000370186.5
CDS-3UTR TCA 90 bp TGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGTTCCAGAACCTTCCATaGCATGAGTGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: CKCPARKVFSHLSCSLVLFQNLP*HECLRA
Trigger: TGCTCTCAGGCACTCATGTCATGGAAGGTTCTGGAA...CAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAAAGGCAAATGTGTCCATaGTCAAGTTCACCCACAACA +
Preference number: 4 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQRQMCP*SSSPTT
Trigger: TGTTGTGGGTGAACTTGATCATGGACACATTTGCCT...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp AATACGTTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGTTCACTCTCCTCTCCTaGCGGCGCATAGAACGAGAG +
Preference number: 4 (lower is better)
Translates to: NTFHKRIWLSRDTVWAGRFTLLS*RRIERE
Trigger: CTCTCGTTCTATGCGCCGCCAGGAGAGGAGAGTGAA...CCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAACGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGCTTGTTGAATGGATTTaGGTCCTTGCAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVLVEWI*VLANAL
Trigger: CAGGGCATTTGCAAGGACCCAAATCCATTCAACAAG...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp CCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTGGAACCAAAGAAAGCTaGAAACGAAACTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PERSSATLVVPSFCRCAGGTKES*KRNSPF
Trigger: GAAAGGGGAGTTTCGTTTTCAGCTTTCTTTGGTTCC...ACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp AGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCTTTATACAGCAGCAGTaGGGGTTTGCTTTTAATATC +
Preference number: 4 (lower is better)
Translates to: SLLRVPVHVGGFHSDPLSFIQQQ*GFAFNI
Trigger: GATATTAAAAGCAAACCCTCACTGCTGCTGTATAAA...GGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp CAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACACGTCATGAAGCTGGCTaGGGACCGAAGACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: QMELPFFLLSFKQGHQGTRHEAG*GPKTAG
Trigger: GCCGGCGGTCTTCGGTCCTCAGCCAGCTTCATGACG...TGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCACTTCTCCTTTTTGGGTaGGTTGGCTTTCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPERSSATLVVPSFCRCALLLFG*VGFLLL
Trigger: GAGAAGAAGAAAGCCAACGCACCCAAAAAGGAGAAG...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGATGTTCAAGATGTTGGTaGACTTTTTCAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERCSRCW*TFSRGS
Trigger: AGATCCTCTTGAAAAAGTGCACCAACATCTTGAACA...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp CCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGGTTGCTTTGTGGCTaGAGGGCCGCTTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PQQMELPFFLLSFKQGHQGLLCG*RAACRR
Trigger: CCGCCTGCAAGCGGCCCTGCAGCCACAAAGCAACCC...CTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGGCCACTGCACCATCCTaGTTCTTAGCTTTCTTATCT +
Preference number: 4 (lower is better)
Translates to: NRKATVSGMQDCKREKAEATAPS*FLAFLS
Trigger: AGATAAGAAAGCTAAGAAGCAGGATGGTGCAGTGGC...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CCA 90 bp AAGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCTGCTGTTCAAGATGTTaGTGCACTTTTTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: KPSEGASARWWFPFRSSVCCSRC*CTFSRG
Trigger: TCCTCTTGAAAAAGTGCACCAACATCTTGAACAGCA...GACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGTGAATGGAGGTCTTaGATTCTGGTTTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LANALPERSSATLVVPSFCEWRS*ILVSPG
Trigger: GCCTGGAGAAACCAGAATCCAAGACCTCCATTCACA...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp GAAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTTACCTGCTCCAGACCTaGAGCGCCCCCTCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: EEHKDPQQMELPFFLLSFYLLQT*SAPSRP
Trigger: AGGCCGAGAGGGGGCGCTCCAGGTCTGGAGCAGGTA...AAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TTCTTTTCTAACCGAAATTCTTTTGCCCAAGATTTGACTGCTTCTGCTCAGGGGACTCGGGCGTGGCCATaGAGTTGTGAATGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FFSNRNSFAQDLTASAQGTRAWP*SCEWRS
Trigger: AGACCTCCATTCACAACTTCATGGCCACGCCCGAGT...CCCCTGAGCAGAAGCAGTCAAATCTTGGGCAAAAGAATTTCGGTTAGAAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GAAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTCTTCCTCAGTCCGGATaGGGAGCCTGTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EEHKDPQQMELPFFLLSFLPQSG*GACGRL
Trigger: CAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAG...AAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp CGTGTCGTCAATGAGCGGGATGTTGTGGGTGTAGTCATTGATCAGAAACTCGGGCAGTTTACAAATGGGTaGCATTCTCAATGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: RVVNERDVVGVVIDQKLGQFTNG*HSQCAL
Trigger: AAGGGCACATTGAGAATGTCACCCATTTGTAAACTG...CCCGAGTTTCTGATCAATGACTACACCCACAACATCCCGCTCATTGACGACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp CAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGAGTCAACATATTTATGAACTaGACACAGTTGACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QGGLPRTPRHLPKQTVGVNIFMN*TQLTKP
Trigger: TGGCTTGGTCAACTGTGTTCAGTTCATAAATATGTT...GACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp TTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGAGCAGAGAGAATTGCGTaGGTAGGGGTAGAAAGATTG +
Preference number: 4 (lower is better)
Translates to: FHKRIWLSRDTVWAGRTGAERIA*VGVERL
Trigger: CAATCTTTCTACCCCTACTCACGCAATTCTCTCTGC...TCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR GCA 90 bp TGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCTTCTCCTTTTTGGGTaGGTTGGCTTTCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CKCPARKVFSHLSCSLVLLLLFG*VGFLLL
Trigger: GAGAAGAAGAAAGCCAACGCACCCAAAAAGGAGAAG...CAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGGCCACCACCTGCCGCTaGTCACCAGTGGTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWATTCR*SPVVLS
Trigger: CGACAGCACCACTGGTGAGCAGCGGCAGGTGGTGGC...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GTAGTCATTGATCAGAAACTCGGGCGTGGCCATGAAGTTGTGAATGGAGGTCTTTGGCAGGGGTCTCAGTaGAAATGCTCCAATTATACC +
Preference number: 4 (lower is better)
Translates to: VVIDQKLGRGHEVVNGGLWQGSQ*KCSNYT
Trigger: GGTATAATTGGAGCATTTGCACTGAGACCCCTGCCA...AAGACCTCCATTCACAACTTCATGGCCACGCCCGAGTTTCTGATCAATGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCATATCTATTGGCCATTaGTCCTATCGGTGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: ANALPERSSATLVVPSFCISIGH*SYRCVY
Trigger: GTAGACACACCGATAGGACCAATGGCCAATAGATAT...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCCTTTCATCATTTTCTTaGCAGAGTAAGCTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPLSSFS*QSKLRR
Trigger: TCTCCTTAGCTTACTCTGTCAAGAAAATGATGAAAG...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR TCA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGTGGCCCGGGCCGTGTTaGTGTTGTCCCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWWPGPC*CCPQSP
Trigger: TGGTGACTGGGGACAACATCAACACGGCCCGGGCCA...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp GTCAATGAGCGGGATGTTGTGGGTGTAGTCATTGATCAGAAACTCGGGCGTGGCTGTTCAAGATGTTGGTaGACTTTTTCAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: VNERDVVGVVIDQKLGRGCSRCW*TFSRGS
Trigger: AGATCCTCTTGAAAAAGTGCACCAACATCTTGAACA...GCCACGCCCGAGTTTCTGATCAATGACTACACCCACAACATCCCGCTCATTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGGTCACAGCCACCACCTaGCGCTGCTCACCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWVTATT*RCSPVV
Trigger: CACCACTGGTGAGCAGCGGCAGGTGGTGGCTGTGAC...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGCTGTTCAAGATGTTaGTGCACTTTTTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: NALPERSSATLVVPSFCRCCSRC*CTFSRG
Trigger: TCCTCTTGAAAAAGTGCACCAACATCTTGAACAGCA...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CCA 90 bp ATGCCAGTAAATAGTTCCTTATTGAAATACGCATCTGGCCATATATACGTGTGTGGGGAAACTGAGGCTTaGCCACCAGGTGCCCACACT +
Preference number: 4 (lower is better)
Translates to: MPVNSSLLKYASGHIYVCGETEA*PPGAHT
Trigger: AGTGTGGGCACCTGGTGGCCAAGCCTCAGTTTCCCC...ACACACGTATATATGGCCAGATGCGTATTTCAATAAGGAACTATTTACTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp CAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGCTTCCTCAGGAGGGTaGCAAAAGTCGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QMELPFFLLSFKQGHQGTASSGG*QKSGPS
Trigger: AGAGGGGCCCGACTTTTGCCACCCTCCTGAGGAAGC...TGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp GAACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGACTTTCATCATTTTCTTaGCAGAGTAAGCTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: EQKSHGERNARLQKREGRLSSFS*QSKLRR
Trigger: TCTCCTTAGCTTACTCTGTCAAGAAAATGATGAAAG...TCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR TCA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGCGGCGCACAGCACCCTaGACTGAACCGCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWRRTAP*TEPLLL
Trigger: CAAGAGAAGCGGTTCAGTTCAGGGTGCTGTGCGCCG...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCATGTTCAAGATGTTGGTaGACTTTTTCAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LPERSSATLVVPSFCRCACSRCW*TFSRGS
Trigger: AGATCCTCTTGAAAAAGTGCACCAACATCTTGAACA...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR GCA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCCTCAACAAATGGAGTTaGCCTTTTTCTTATTATCGT +
Preference number: 4 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLLNKWS*PFSYYR
Trigger: ACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAG...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp ATGCCAGTAAATAGTTCCTTATTGAAATACGCATCTGGCCATATATACGTGTGTGGGGCATGGCCAGGATaGAGGATGTGGAATTGGAGT +
Preference number: 4 (lower is better)
Translates to: MPVNSSLLKYASGHIYVCGAWPG*RMWNWS
Trigger: ACTCCAATTCCACATCCTTCATCCTGGCCATGCCCC...ACACACGTATATATGGCCAGATGCGTATTTCAATAAGGAACTATTTACTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp ATGCCAGTAAATAGTTCCTTATTGAAATACGCATCTGGCCATATATACGTGTGTTGCTCAATTCGGCTCTaGAGGCCTCGGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: MPVNSSLLKYASGHIYVCCSIRL*RPRNCF
Trigger: GAAGCAGTTCCGAGGCCTGCAGAGCCGAATTGAGCA...ACACACGTATATATGGCCAGATGCGTATTTCAATAAGGAACTATTTACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACACCTGCTTTCCCGATCTaGACGGCTAGCTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QMELPFFLLSFKQGHQGTPAFPI*TASFVS
Trigger: GCTCACAAAGCTAGCCGTGCAGATCGGGAAAGCAGG...TGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp AGGATGTGGAATTGGAGTAGGAACCAAAGAAAGCTGAAAACGAAACTCCCCTTTAGGCAAATGTGTCCATaGTCAAGTTCACCCACAACA +
Preference number: 4 (lower is better)
Translates to: RMWNWSRNQRKLKTKLPFRQMCP*SSSPTT
Trigger: TGTTGTGGGTGAACTTGATCATGGACACATTTGCCT...AAAGGGGAGTTTCGTTTTCAGCTTTCTTTGGTTCCTACTCCAATTCCACATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp AAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAGGTCTTGGGTTGCTTTaGGGGGATGAAGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: KNTKTLNKWSCPFSYYRLGLGLL*GDEVLP
Trigger: GGGCAGAACTTCATCCCCCCAAAGCAACCCAAGACC...TAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GAAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAGATGATGCCTGTCTaGGAATTCACGCCAACGGCG +
Preference number: 4 (lower is better)
Translates to: EEHKDPQQMELPFFLLSFKMMPV*EFTPTA
Trigger: CGCCGTTGGCGTGAATTCCCAGACAGGCATCATCTT...AAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GTAGTCATTGATCAGAAACTCGGGCGTGGCCATGAAGTTGTGAATGGAGGTCTTATTGAAATACGCATCTaGCCATATATACGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VVIDQKLGRGHEVVNGGLIEIRI*PYIRVC
Trigger: ACACACACGTATATATGGCCAGATGCGTATTTCAAT...AAGACCTCCATTCACAACTTCATGGCCACGCCCGAGTTTCTGATCAATGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp ATGCCAGTAAATAGTTCCTTATTGAAATACGCATCTGGCCATATATACGTGTGTACGCCTGCTCCTGTTTaGTTTTGTGTGGATGCCGGT +
Preference number: 4 (lower is better)
Translates to: MPVNSSLLKYASGHIYVCTPAPV*FCVDAG
Trigger: ACCGGCATCCACACAAAACCAAACAGGAGCAGGCGT...ACACACGTATATATGGCCAGATGCGTATTTCAATAAGGAACTATTTACTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CCA 90 bp GAAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTCCTTTTTGGGTGCGTTaGCTTTCTTCTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: EEHKDPQQMELPFFLLSFPFWVR*LSSSPA
Trigger: AGCGGGAGAAGAAGAAAGCCAACGCACCCAAAAAGG...AAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR GCA 90 bp CAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGCCACTGCACCATCCTaGTTCTTAGCTTTCTTATCT +
Preference number: 4 (lower is better)
Translates to: QMELPFFLLSFKQGHQGTATAPS*FLAFLS
Trigger: AGATAAGAAAGCTAAGAAGCAGGATGGTGCAGTGGC...TGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR TCA 90 bp CCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGCTTTCATCATTTTCTTaGCAGAGTAAGCTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PQQMELPFFLLSFKQGHQLSSFS*QSKLRR
Trigger: TCTCCTTAGCTTACTCTGTCAAGAAAATGATGAAAG...CTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
3UTR CAA 72 bp CTCATTGAAGAACACAAAGACCCTCAACAAATGGAGTaGCCCTTTTTCTTATTATCGTTTAAACAAGGACAT +
Preference number: 4 (lower is better)
Translates to: LIEEHKDPQQME*PFFLLSFKQGH
Trigger: ATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTTCAATGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263519.4
ENST00000370186.5
CDS CCA 90 bp GGTGTGGCCTCAGGCCCCGCCTATTCCCGCTTGAGCTGGGGCTGGTaGCTCAGGCGGGCCCTGGCTCCGCAGCCAAGTGTGCAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: GVASGPAYSRLSWGW*LRRALAPQPSVQWC
Trigger: ACACCACTGCACACTTGGCTGCGGAGCCAGGGCCCGCCTGAGCCACCAGCCCCAGCTCAAGCGGGAATAGGCGGGGCCTGAGGCCACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS-3UTR CAA 90 bp CCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGGCAATGTCGGAGGCCTCCTaGGCCACGTCGGTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: PPPPRTCAQLRLLSGLWAMSEAS*ATSVPA
Trigger: CGCAGGGACCGACGTGGCCAAGGAGGCCTCCGACAT...TGCCCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS TCA 90 bp CCAGGCCCTCTGTGGGTGAGGTCTTCAGCCTCCGGCAGAGCCCGCTaGCATCCCCGTAGGCCTCCTCGATCTTCTGCAGCGCCTCGGCCC +
Preference number: 5 (lower is better)
Translates to: PGPLWVRSSASGRAR*HPRRPPRSSAAPRP
Trigger: GGGCCGAGGCGCTGCAGAAGATCGAGGAGGCCTACGGGGATGTCAGCGGGCTCTGCCGGAGGCTGAAGACCTCACCCACAGAGGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS GCA 90 bp CCTTCGGCCAGCTCCTCGTCGGTCATCTCGTCCTTCCCGGGCCCGTaGCCGGCTTCCTTCAGGCACTTGAGCTGGCTGGTGGGGATGGTG +
Preference number: 5 (lower is better)
Translates to: PSASSSSVISSFPGP*PASFRHLSWLVGMV
Trigger: CACCATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAGCCGGGCACGGGCCCGGGAAGGACGAGATGACCGACGAGGAGCTGGCCGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS GCA 90 bp GCTGGGGCTGGTGGCTCAGGCGGGCCCTGGCTCCGCAGCCAAGTGTaGAGTGGTGTCCTTACTCTGGCAGGACCTCAGGGAGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: AGAGGSGGPWLRSQV*SGVLTLAGPQGGGS
Trigger: TGACCCTCCTCCCTGAGGTCCTGCCAGAGTAAGGACACCACTGCACACTTGGCTGCGGAGCCAGGGCCCGCCTGAGCCACCAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS-3UTR CAA 90 bp TTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGGAGCGAAAGGTGGGGGCGGGGAGGGCCGGCCCATCGTaGGTGCCATCCCCTGTCACA +
Preference number: 5 (lower is better)
Translates to: LGISVGPGRGQERKVGAGRAGPS*VPSPVT
Trigger: TGTGACAGGGGATGGCACCAACGATGGGCCGGCCCT...CCCCGCCCCCACCTTTCGCTCCTGCCCTCTGCCCGGCCCTACTGAGATTCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS CCA 90 bp GCGGGCCCTGGCTCCGCAGCCAAGTGTGCAGTGGTGTCCTTACTCTaGCAGGACCTCAGGGAGGAGGGTCAGTCGCTCCATGTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: AGPGSAAKCAVVSLL*QDLREEGQSLHVRG
Trigger: GCCCCTGACATGGAGCGACTGACCCTCCTCCCTGAGGTCCTGCCAGAGTAAGGACACCACTGCACACTTGGCTGCGGAGCCAGGGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS GCA 90 bp AGGGCTGTTGTCTCAGCTGCTGGAAAACCTAACGTCGCCTTCGGCTaGGGCGGCAGGAGTGAAGTGGGCCGCCGAGGGGCAAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RAVVSAAGKPNVAFG*GGRSEVGRRGARSC
Trigger: GCAGGACCTTGCCCCTCGGCGGCCCACTTCACTCCTGCCGCCGCAGCCGAAGGCGACGTTAGGTTTTCCAGCAGCTGAGACAACAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS TCA 90 bp GGGAGTGGGGTTGCCCTGAGGCTGGGTCCCTTGAGACTCGGCCCTTaGGACCACTGGGAGGGAACACAGGACCCAGGGCACCAAGAACAG +
Preference number: 5 (lower is better)
Translates to: GSGVALRLGPLRLGP*DHWEGTQDPGHQEQ
Trigger: CTGTTCTTGGTGCCCTGGGTCCTGTGTTCCCTCCCAGTGGTCTCAAGGGCCGAGTCTCAAGGGACCCAGCCTCAGGGCAACCCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS-3UTR CAA 90 bp CTGCCCCCGCCCCCTCGGACCTGTGCTCAGCTGAGGCTGCTCTCTGGACTCTGGAACTCGATGGAACTATaGGCCATGTCGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: LPPPPRTCAQLRLLSGLWNSMEL*AMSPML
Trigger: CAGCATGGGCGACATGGCCAATAGTTCCATCGAGTT...CCAGAGTCCAGAGAGCAGCCTCAGCTGAGCACAGGTCCGAGGGGGCGGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp TGCAGGCGGCTCCCTCAGGTGGCACCCTTCACAGGCCTGCAGAGCACTCAACTTTTGACCAGTGTGTGCTaGTCGGTGGGAGACGACCGG +
Preference number: 5 (lower is better)
Translates to: CRRLPQVAPFTGLQSTQLLTSVC*SVGDDR
Trigger: CCGGTCGTCTCCCACCGACAAGCACACACTGGTCAA...AAGTTGAGTGCTCTGCAGGCCTGTGAAGGGTGCCACCTGAGGGAGCCGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGCCCACGTCCGCCTTCTaGAGGGCCGGCCCATCGTTG +
Preference number: 5 (lower is better)
Translates to: KEYGFRETPSGREGLDRAPTSAF*RAGPSL
Trigger: CAACGATGGGCCGGCCCTCAAGAAGGCGGACGTGGG...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp CCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACATGTCGGAGGCCTCCTaGGCCACGTCGGTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: PSGREGLDRAVKKEQKSHMSEAS*ATSVPA
Trigger: CGCAGGGACCGACGTGGCCAAGGAGGCCTCCGACAT...GTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp CGCCCCCTCTCGGCCTTCTCCTTGGGAATCTCAGTAGGGCCGGGCAGAGGGCAGACAGGGCCCCCAGCCTaGAAGACTGCAAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: RPLSAFSLGISVGPGRGQTGPPA*KTAKTR
Trigger: TCTTGTTTTTGCAGTCTTCAAGGCTGGGGGCCCTGT...CTGCCCTCTGCCCGGCCCTACTGAGATTCCCAAGGAGAAGGCCGAGAGGGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS GCA 90 bp CTATTGGCCATGTCGCCCATGCTGCCTGTCAGGCCTTCTCACAAGTaGAATCTTGGCTCAGCCACAGCTAGGGACAGGCGGCCACCCACG +
Preference number: 5 (lower is better)
Translates to: LLAMSPMLPVRPSHK*NLGSATARDRRPPT
Trigger: CGTGGGTGGCCGCCTGTCCCTAGCTGTGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CCA 90 bp GGCGACAAAGCCTGCTCCCCTTCCTCACCGGGGCTCTCTGTGTTCTaGCCAGGCCAGGGCATAGGTGACAGTGTTCAGAGTCCAGACCTA +
Preference number: 5 (lower is better)
Translates to: GDKACSPSSPGLSVF*PGQGIGDSVQSPDL
Trigger: TAGGTCTGGACTCTGAACACTGTCACCTATGCCCTGGCCTGGCCAGAACACAGAGAGCCCCGGTGAGGAAGGGGAGCAGGCTTTGTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS-3UTR CAA 90 bp TGCAGGCGGCTCCCTCAGGTGGCACCCTTCACAGGCCTGCAGAGCACTCAACTTTTGCGGATCCGCCGGTaGAACTCCTTCCCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: CRRLPQVAPFTGLQSTQLLRIRR*NSFPSR
Trigger: CCTAGAAGGGAAGGAGTTCAACCGGCGGATCCGCAA...AAGTTGAGTGCTCTGCAGGCCTGTGAAGGGTGCCACCTGAGGGAGCCGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTAGCTTGGGCCACACCTaGTCCAGCCGCTCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVSLGHT*SSRSCS
Trigger: AGAACAGGAGCGGCTGGACAAGGTGTGGCCCAAGCT...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCTGGCTGCAGGGCCGCTaGCAGGCGGCTCCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCWLQGR*QAAPSG
Trigger: ACCTGAGGGAGCCGCCTGCAAGCGGCCCTGCAGCCA...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS CCA 90 bp CATCCCGCTGCTGCTGGGGCTTGGGGTGGAACTCGATGGAACTATTaGCCATGTCGCCCATGCTGCCTGTCAGGCCTTCTCACAAGTGCA +
Preference number: 5 (lower is better)
Translates to: HPAAAGAWGGTRWNY*PCRPCCLSGLLTSA
Trigger: TGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGCCCCAGCAGCAGCGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CCA 90 bp GCTAAGCGTGGACACTGGGCCCTAAGCTCTTTGAGACACGTGGTATaGAGTCGGCAGGAAGTCTACCGCGTGGTCAGTCCCGCATGTGGC +
Preference number: 5 (lower is better)
Translates to: AKRGHWALSSLRHVV*SRQEVYRVVSPACG
Trigger: GCCACATGCGGGACTGACCACGCGGTAGACTTCCTGCCGACTCCATACCACGTGTCTCAAAGAGCTTAGGGCCCAGTGTCCACGCTTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp AGCGGGCTCCCGGGACTGGAGGAAAACACTGAAGAGGTAGCTGACTTGGTGACACGCTTCTCCAGGTCATaGGTGTTGTCCGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SGLPGLEENTEEVADLVTRFSRS*VLSARP
Trigger: GGGCCTGGCGGACAACACCAATGACCTGGAGAAGCG...TGTCACCAAGTCAGCTACCTCTTCAGTGTTTTCCTCCAGTCCCGGGAGCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp CTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGACGCTTCTCCAGGTCATaGGTGTTGTCCGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LSRDTVWAGRTGQGGKERRFSRS*VLSARP
Trigger: GGGCCTGGCGGACAACACCAATGACCTGGAGAAGCG...TCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTTGGATGATGCCGCATTaGGCTGCGATGGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGWMMPH*AAMARA
Trigger: GGCCCGGGCCATCGCAGCCAAATGCGGCATCATCCA...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTAGGGCCGGCCCATCGTaGGTGCCATCCCCTGTCACA +
Preference number: 5 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTRAGPS*VPSPVT
Trigger: TGTGACAGGGGATGGCACCAACGATGGGCCGGCCCT...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp AGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAGGGCCGGCCCATCGTaGGTGCCATCCCCTGTCACA +
Preference number: 5 (lower is better)
Translates to: RDTVWAGRTGQGGKERTERAGPS*VPSPVT
Trigger: TGTGACAGGGGATGGCACCAACGATGGGCCGGCCCT...TTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCCCCACGTCCGCCTTCTaGAGGGCCGGCCCATCGTTG +
Preference number: 5 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCPTSAF*RAGPSL
Trigger: CAACGATGGGCCGGCCCTCAAGAAGGCGGACGTGGG...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCATGTCGGAGGCCTCCTaGGCCACGTCGGTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCMSEAS*ATSVPA
Trigger: CGCAGGGACCGACGTGGCCAAGGAGGCCTCCGACAT...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS TCA 90 bp CCGAAGACCGCCGGCGCACAGCACCCTGAACTGAACCGCTTCTCTTaGAGGTACTCACTACCTCCATCTGCGTCTGAATCCGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: PKTAGAQHPELNRFS*RYSLPPSASESGSG
Trigger: GCCTGAACCGGATTCAGACGCAGATGGAGGTAGTGAGTACCTTCAAGAGAAGCGGTTCAGTTCAGGGTGCTGTGCGCCGGCGGTCTTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
CDS TCA 90 bp AAGCTGGCTGAGGACCGAAGACCGCCGGCGCACAGCACCCTGAACTaGACCGCTTCTCTTGAAGGTACTCACTACCTCCATCTGCGTCTG +
Preference number: 5 (lower is better)
Translates to: KLAEDRRPPAHSTLN*TASLEGTHYLHLRL
Trigger: CAGACGCAGATGGAGGTAGTGAGTACCTTCAAGAGAAGCGGTTCAGTTCAGGGTGCTGTGCGCCGGCGGTCTTCGGTCCTCAGCCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
CDS TCA 90 bp CTCTGTGAGCACCGACAATTGGAACAGCCTGGAACTCTAAGACTCTaGCCGATGGGACTCGCTTCTACTAGCCAGGCTGCAGCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LCEHRQLEQPGTLRL*PMGLASTSQAAAAP
Trigger: GGGGGCCGCTGCAGCCTGGCTAGTAGAAGCGAGTCCCATCGGTCAGAGTCTTAGAGTTCCAGGCTGTTCCAATTGTCGGTGCTCACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS-3UTR CAA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGTGCCCAGGCAAGGTTaGGCGGCGGTGAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGVPRQG*AAVRKL
Trigger: CAGCTTTCTCACCGCCGCCAAACCTTGCCTGGGCAC...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp AGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAACGCTGCTGCTGGGGCTaGGGGTGGAACTCGATGGAA +
Preference number: 5 (lower is better)
Translates to: RDTVWAGRTGQGGKERTERCCWG*GWNSME
Trigger: TTCCATCGAGTTCCACCCCAAGCCCCAGCAGCAGCG...TTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCTCCAGGTCATTGGTGTaGTCCGCCAGGCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: AGVQVPICVCACMCACDFSRSLV*SARPSV
Trigger: CACAGAGGGCCTGGCGGACAACACCAATGACCTGGA...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp AGCGGGCTCCCGGGACTGGAGGAAAACACTGAAGAGGTAGCTGACTTGGTGACATCCAGGTCATTGGTGTaGTCCGCCAGGCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SGLPGLEENTEEVADLVTSRSLV*SARPSV
Trigger: CACAGAGGGCCTGGCGGACAACACCAATGACCTGGA...TGTCACCAAGTCAGCTACCTCTTCAGTGTTTTCCTCCAGTCCCGGGAGCCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp CCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACTCCAGGTCATTGGTGTaGTCCGCCAGGCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PSGREGLDRAVKKEQKSHSRSLV*SARPSV
Trigger: CACAGAGGGCCTGGCGGACAACACCAATGACCTGGA...GTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GATACGCTCCCCTCAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTAGCAGGTCGCCGTACTaGACCTGGGCAATGTCCCCC +
Preference number: 5 (lower is better)
Translates to: DTLPSGPGAEPQIHDFMASRSPY*TWAMSP
Trigger: GGGGGACATTGCCCAGGTCAAGTACGGCGACCTGCT...AGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACACCACGGTCATACGGTaGGTGGTGAGCGTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: FAGVQVPICVCACMCACDTTVIR*VVSVPV
Trigger: GACGGGCACGCTCACCACCAACCGTATGACCGTGGT...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTGGATGATGCCGCATTaGGCTGCGATGGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: VLANALPERSSATLVVPSWMMPH*AAMARA
Trigger: GGCCCGGGCCATCGCAGCCAAATGCGGCATCATCCA...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCAGCTTGGGCCACACCTaGTCCAGCCGCTCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: AGVQVPICVCACMCACDFSLGHT*SSRSCS
Trigger: AGAACAGGAGCGGCTGGACAAGGTGTGGCCCAAGCT...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGAGCTTGGGCCACACCTaGTCCAGCCGCTCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: REGLDRAVKKEQKSHGERSLGHT*SSRSCS
Trigger: AGAACAGGAGCGGCTGGACAAGGTGTGGCCCAAGCT...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp TCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACATTGACCAGTGTGTGCTaGTCGGTGGGAGACGACCGG +
Preference number: 5 (lower is better)
Translates to: SRDTVWAGRTGQGGKERTLTSVC*SVGDDR
Trigger: CCGGTCGTCTCCCACCGACAAGCACACACTGGTCAA...TGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp TCCCTTGAAAGGGTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAACCCACGTCCGCCTTCTaGAGGGCCGGCCCATCGTTG +
Preference number: 5 (lower is better)
Translates to: SLERVFSSLAGVSVQMLQPTSAF*RAGPSL
Trigger: CAACGATGGGCCGGCCCTCAAGAAGGCGGACGTGGG...TTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAACCCTTTCAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GAGGCGCTCCTCGTTCTCGTCCACGTCCGTGTCGTCAATGAGCGGGATGTTGTGTGGCAGGCTGCACCCTaGTTGAATGGATTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: EALLVLVHVRVVNERDVVWQAAP*LNGFGS
Trigger: GGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCA...CACAACATCCCGCTCATTGACGACACGGACGTGGACGAGAACGAGGAGCGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTTGCAGAGGGCGGGTaGCTTTGTGGCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FAGVQVPICVCACMCACDFAEGG*LCGCRA
Trigger: GGCCCTGCAGCCACAAAGCAACCCGCCCTCTGCAAA...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp TGCAGGCGGCTCCCTCAGGTGGCACCCTTCACAGGCCTGCAGAGCACTCAACTTAGGACTCCTCGGCATTaGCCAAAGCAAACAGTGGGA +
Preference number: 5 (lower is better)
Translates to: CRRLPQVAPFTGLQSTQLRTPRH*PKQTVG
Trigger: TCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCT...AAGTTGAGTGCTCTGCAGGCCTGTGAAGGGTGCCACCTGAGGGAGCCGCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS TCA 90 bp TTCCTCACCGGGGCTCTCTGTGTTCTGGCCAGGCCAGGGCATAGGTaGCAGTGTTCAGAGTCCAGACCTAACACATCCTTCCCAGGCTAC +
Preference number: 5 (lower is better)
Translates to: FLTGALCVLARPGHR*QCSESRPNTSFPGY
Trigger: GTAGCCTGGGAAGGATGTGTTAGGTCTGGACTCTGAACACTGTCACCTATGCCCTGGCCTGGCCAGAACACAGAGAGCCCCGGTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS GCA 90 bp GGGGCTTGGGGTGGAACTCGATGGAACTATTGGCCATGTCGCCCATaGTGCCTGTCAGGCCTTCTCACAAGTGCAATCTTGGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: GAWGGTRWNYWPCRP*CLSGLLTSAILAQP
Trigger: TGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CCA 90 bp AACTTGGAGTCCTGGGAGGTGGAGTCTCCATCCTGGAGGACAGGGTaGGGTCGGGGTGCTCTGCTAACCCTCACTGTCTTCATGAATGCA +
Preference number: 5 (lower is better)
Translates to: NLESWEVESPSWRTG*GRGALLTLTVFMNA
Trigger: TGCATTCATGAAGACAGTGAGGGTTAGCAGAGCACCCCGACCCCACCCTGTCCTCCAGGATGGAGACTCCACCTCCCAGGACTCCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTGCCCAGGCAAGGTTaGGCGGCGGTGAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLVPRQG*AAVRKL
Trigger: CAGCTTTCTCACCGCCGCCAAACCTTGCCTGGGCAC...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAACTCACAAGTGCAATCTaGGCTCAGCCACAGCTAGGG +
Preference number: 5 (lower is better)
Translates to: GFRETPSGREGLDRAVKKLTSAI*AQPQLG
Trigger: CCCTAGCTGTGGCTGAGCCAAGATTGCACTTGTGAG...TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCCGCTGCTGCTGGGGCTaGGGGTGGAACTCGATGGAA +
Preference number: 5 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLRCCWG*GWNSME
Trigger: TTCCATCGAGTTCCACCCCAAGCCCCAGCAGCAGCG...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCCGCTGCTGCTGGGGCTaGGGGTGGAACTCGATGGAA +
Preference number: 5 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPRCCWG*GWNSME
Trigger: TTCCATCGAGTTCCACCCCAAGCCCCAGCAGCAGCG...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAAACCACGGTCATACGGTaGGTGGTGAGCGTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQTTVIR*VVSVPV
Trigger: GACGGGCACGCTCACCACCAACCGTATGACCGTGGT...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTACGACCTCATTCTCGTaGTCCCAGTCGGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGTTSFS*SQSGSW
Trigger: CCAGGAGCCCGACTGGGACAACGAGAATGAGGTCGT...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTGACCAGTGTGTGCTaGTCGGTGGGAGACGACCGG +
Preference number: 5 (lower is better)
Translates to: FAGVQVPICVCACMCACDLTSVC*SVGDDR
Trigger: CCGGTCGTCTCCCACCGACAAGCACACACTGGTCAA...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGCTTCCTTCAGGCACTaGAGCTGGCTGGTGGGGATG +
Preference number: 5 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGASFRH*SWLVGM
Trigger: CATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAGC...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GATACGCTCCCCTCAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTCTCTCGGCCTTCTCCTaGGGAATCTCAGTAGGGCCG +
Preference number: 5 (lower is better)
Translates to: DTLPSGPGAEPQIHDFMALSAFS*GISVGP
Trigger: CGGCCCTACTGAGATTCCCAAGGAGAAGGCCGAGAG...AGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GCGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGGGACGTGCTCCTGTTTGGTTTaGTGTGGATGCCGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: AWSGRCRCLWRCCSGWGTCSCLV*CGCRWR
Trigger: CCTCCACCGGCATCCACACAAAACCAAACAGGAGCA...CGTCCCCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTGACGCCTGCTCCTGTTaGGTTTTGTGTGGATGCCGG +
Preference number: 5 (lower is better)
Translates to: ASARWWFPFRSSVPQVPTDACSC*VLCGCR
Trigger: CCGGCATCCACACAAAACCAAACAGGAGCAGGCGTC...AGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS GCA 90 bp GCTTGGGGTGGAACTCGATGGAACTATTGGCCATGTCGCCCATGCTaGCTGTCAGGCCTTCTCACAAGTGCAATCTTGGCTCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: AWGGTRWNYWPCRPC*LSGLLTSAILAQPQ
Trigger: CTGTGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS-3UTR CAA 90 bp AGCGGGCTCCCGGGACTGGAGGAAAACACTGAAGAGGTAGCTGACTTGGTGACACTCACAAGTGCAATCTaGGCTCAGCCACAGCTAGGG +
Preference number: 5 (lower is better)
Translates to: SGLPGLEENTEEVADLVTLTSAI*AQPQLG
Trigger: CCCTAGCTGTGGCTGAGCCAAGATTGCACTTGTGAG...TGTCACCAAGTCAGCTACCTCTTCAGTGTTTTCCTCCAGTCCCGGGAGCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGCGCTTCTCCAGGTCATaGGTGTTGTCCGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: NALPERSSATLVVPSFCRRFSRS*VLSARP
Trigger: GGGCCTGGCGGACAACACCAATGACCTGGAGAAGCG...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGAGCAGGTCGCCGTACTaGACCTGGGCAATGTCCCCC +
Preference number: 5 (lower is better)
Translates to: NRKATVSGMQDCKREKAESRSPY*TWAMSP
Trigger: GGGGGACATTGCCCAGGTCAAGTACGGCGACCTGCT...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GTCCTCGTCTTCCTCAGTCCGGATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGCCCCATCCTGCTGCTaGCCTTTCTTATCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VLVFLSPDEEPVAGCTLVAPSCC*PFLSFF
Trigger: GAAGAAAGATAAGAAAGGCAAGCAGCAGGATGGGGC...AACAAGGGTGCAGCCTGCCACAGGCTCCTCATCCGGACTGAGGAAGACGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349466.6
CDS-3UTR CAA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGACCACGGTCATACGGTaGGTGGTGAGCGTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: NRKATVSGMQDCKREKAETTVIR*VVSVPV
Trigger: GACGGGCACGCTCACCACCAACCGTATGACCGTGGT...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCCCCCGGAGTTCGCCATaGCTGTTCAAGATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: AGVQVPICVCACMCACDFPRSSP*LFKMLV
Trigger: CACCAACATCTTGAACAGCAATGGCGAACTCCGGGG...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAATTATACCTGCTCAGAGGGCGGGTTGCTTaGTGGCTGCAGGGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: VFSSLAGVSVQMLQLYLLRGRVA*WLQGRL
Trigger: CAAGCGGCCCTGCAGCCACAAAGCAACCCGCCCTCT...GAGCAGGTATAATTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGGCAGCACTGGTAGGATaGGCAGCAGAGAGAATTGCG +
Preference number: 5 (lower is better)
Translates to: REGLDRAVKKEQKSHGERAALVG*AAERIA
Trigger: CGCAATTCTCTCTGCTGCCAATCCTACCAGTGCTGC...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTCTCACAAGTGCAATCTaGGCTCAGCCACAGCTAGGG +
Preference number: 5 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTLTSAI*AQPQLG
Trigger: CCCTAGCTGTGGCTGAGCCAAGATTGCACTTGTGAG...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGAACTCGATGGAACTATaGGCCATGTCGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: REGLDRAVKKEQKSHGERNSMEL*AMSPML
Trigger: CAGCATGGGCGACATGGCCAATAGTTCCATCGAGTT...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp TGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGAGCAGGTCGCCGTACTaGACCTGGGCAATGTCCCCC +
Preference number: 5 (lower is better)
Translates to: CKCPARKVFSHLSCSLVLSRSPY*TWAMSP
Trigger: GGGGGACATTGCCCAGGTCAAGTACGGCGACCTGCT...CAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GAGGCGCTCCTCGTTCTCGTCCACGTCCGTGTCGTCAATGAGCGGGATGTTGTGACAGACTTCTCCTTTTaGGGTGCGTTGGCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: EALLVLVHVRVVNERDVVTDFSF*GALAFF
Trigger: GAAGAAAGCCAACGCACCCAAAAAGGAGAAGTCTGT...CACAACATCCCGCTCATTGACGACACGGACGTGGACGAGAACGAGGAGCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp AGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAACCCCGGAGTTCGCCATaGCTGTTCAAGATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RDTVWAGRTGQGGKERTEPRSSP*LFKMLV
Trigger: CACCAACATCTTGAACAGCAATGGCGAACTCCGGGG...TTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCACGACCTCATTCTCGTaGTCCCAGTCGGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ANALPERSSATLVVPSFCTTSFS*SQSGSW
Trigger: CCAGGAGCCCGACTGGGACAACGAGAATGAGGTCGT...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTGCGGATCCGCCGGTaGAACTCCTTCCCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: VLANALPERSSATLVVPSLRIRR*NSFPSR
Trigger: CCTAGAAGGGAAGGAGTTCAACCGGCGGATCCGCAA...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCCTGTCTATGGCGTTGTaGTTCTGGTTGGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPLSMAL*FWLGDG
Trigger: CCCGTCCCCCAACCAGAACAACAACGCCATAGACAG...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCCTGTCTATGGCGTTGTaGTTCTGGTTGGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCLSMAL*FWLGDG
Trigger: CCCGTCCCCCAACCAGAACAACAACGCCATAGACAG...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGCCGCTGTCTATGGCGTaGTTGTTCTGGTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVPLSMA*LFWLGD
Trigger: GTCCCCCAACCAGAACAACAACGCCATAGACAGCGG...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACGAAGAGGTAGCTGACTaGGTGACATGCGTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: FAGVQVPICVCACMCACDEEVAD*VTCVVR
Trigger: CCTGACCACGCATGTCACCAAGTCAGCTACCTCTTC...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp CAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTTAAGCTTGGCCGCGAAGAGGTAGCTGACTaGGTGACATGCGTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: QDLVLSHKSMTSWLKLGREEVAD*VTCVVR
Trigger: CCTGACCACGCATGTCACCAAGTCAGCTACCTCTTC...GCGGCCAAGCTTAAGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp TTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTGGCAGGCTGCACCCTaGTTGAATGGATTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: LQVCRSPYVCVRACVRVTWQAAP*LNGFGS
Trigger: GGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCA...AGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp AAGCCTTCTGAGGGTGCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCTCCATTGGCTTCTTTaGAACTCTTGGCCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: KPSEGASARWWFPFRSSVLHWLL*NSWPCP
Trigger: GGGGCAGGGCCAAGAGTTCAAAAGAAGCCAATGGAG...GACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGCACCCTCAGAAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGGGGTGCCAGTGCACGTaGGTGGTTTCCATTCCGATC +
Preference number: 5 (lower is better)
Translates to: VLANALPERSSATLVVPSGCQCT*VVSIPI
Trigger: GATCGGAATGGAAACCACCAACGTGCACTGGCACCC...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS GCA 90 bp TGCGTGATCGTGGTCTCTGGGGGACTCTGTAGCTCTGGAAAGTTTTaGAAGGAGCCCGTGGTGAGAGTGAGAGGAGTCAAAGAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: CVIVVSGGLCSSGKF*KEPVVRVRGVKEGF
Trigger: AAAGCCCTCTTTGACTCCTCTCACTCTCACCACGGGCTCCTTGCAAAACTTTCCAGAGCTACAGAGTCCCCCAGAGACCACGATCACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS-3UTR CAA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCGAGCTCTCGTCGATCTaGAGGTCATTGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCELSSI*RSLAWM
Trigger: CATCCAGGCCAATGACCTCAAGATCGACGAGAGCTC...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp TTTGCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTCCTTTTTGGGTGCGTaGGCTTTCTTCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: FAGVQVPICVCACMCACDSFLGA*AFFFSR
Trigger: GCGGGAGAAGAAGAAAGCCAACGCACCCAAAAAGGA...GTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCCCCCCGGAGTTCGCCATaGCTGTTCAAGATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ERSSATLVVPSFCRCAGPPRSSP*LFKMLV
Trigger: CACCAACATCTTGAACAGCAATGGCGAACTCCGGGG...GGGACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTACGACCTCATTCTCGTaGTCCCAGTCGGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LANALPERSSATLVVPSFTTSFS*SQSGSW
Trigger: CCAGGAGCCCGACTGGGACAACGAGAATGAGGTCGT...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGTTGCGGATCCGCCGGTaGAACTCCTTCCCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: NRKATVSGMQDCKREKAELRIRR*NSFPSR
Trigger: CCTAGAAGGGAAGGAGTTCAACCGGCGGATCCGCAA...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GCAGGTGTGCAGGTCCCCATATGTGTGTGTGCGTGCATGTGTGCGTGTGACTTCCTGTCGATAATCCCTTaGACCAGTGTGTGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: AGVQVPICVCACMCACDFLSIIP*TSVCLS
Trigger: CGACAAGCACACACTGGTCAAAGGGATTATCGACAG...GAAGTCACACGCACACATGCACGCACACACACATATGGGGACCTGCACACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GCCAGGATACGCTCCCCTCAGGACCTGGTGCTGAGCCACAAATCCATGACTTCACTGTCGATAATCCCTTaGACCAGTGTGTGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: ARIRSPQDLVLSHKSMTSLSIIP*TSVCLS
Trigger: CGACAAGCACACACTGGTCAAAGGGATTATCGACAG...TGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp CGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTGAGCGGCTGTCGATAATCCCTTaGACCAGTGTGTGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: REGLDRAVKKEQKSHGERLSIIP*TSVCLS
Trigger: CGACAAGCACACACTGGTCAAAGGGATTATCGACAG...CCGCTCACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp CTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTGCTTCCTTCAGGCACTaGAGCTGGCTGGTGGGGATG +
Preference number: 5 (lower is better)
Translates to: LANALPERSSATLVVPSFASFRH*SWLVGM
Trigger: CATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAGC...AAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GTGGGTGTAGTCATTGATCAGAAACTCGGGCGTGGCCATGAAGTTGTGAATGGAGCTTCCTTCAGGCACTaGAGCTGGCTGGTGGGGATG +
Preference number: 5 (lower is better)
Translates to: VGVVIDQKLGRGHEVVNGASFRH*SWLVGM
Trigger: CATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAGC...TCCATTCACAACTTCATGGCCACGCCCGAGTTTCTGATCAATGACTACACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp CCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTCCGCTGTCTATGGCGTaGTTGTTCTGGTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: PERSSATLVVPSFCRCAGPLSMA*LFWLGD
Trigger: GTCCCCCAACCAGAACAACAACGCCATAGACAGCGG...ACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GCCAGTGCACGTTGGTGGTTTCCATTCCGATCCTCTGTCCCTCAGGTCCCAACTTCTTTTGCCCAAGATTaGACTGCTTCTGCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: ASARWWFPFRSSVPQVPTSFAQD*TASAQG
Trigger: CCCCTGAGCAGAAGCAGTCAAATCTTGGGCAAAAGA...AGTTGGGACCTGAGGGACAGAGGATCGGAATGGAAACCACCAACGTGCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS GCA 90 bp AAAGAGTGCACCCTGTTTCCTCATACGCAAAACAGGGGACTCAGCTaGCCGTGTCTCTGTGAGCACCGACAATTGGAACAGCCTGGAACT +
Preference number: 5 (lower is better)
Translates to: KECTLFPHTQNRGLS*PCLCEHRQLEQPGT
Trigger: AGTTCCAGGCTGTTCCAATTGTCGGTGCTCACAGAGACACGGGCAGCTGAGTCCCCTGTTTTGCGTATGAGGAAACAGGGTGCACTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS-3UTR CAA 90 bp GTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGAACTCGATGGAACTATaGGCCATGTCGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: VLANALPERSSATLVVPSNSMEL*AMSPML
Trigger: CAGCATGGGCGACATGGCCAATAGTTCCATCGAGTT...CGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp AAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGACAGGGCGGAACTTCACGAAGTATaGTACATAGACCGGCGTGCA +
Preference number: 5 (lower is better)
Translates to: KEYGFRETPSGREGLDRAELHEV*YIDRRA
Trigger: TGCACGCCGGTCTATGTACAATACTTCGTGAAGTTC...CGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp CCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGGTAGTTGTTCCCTCGTTTaGCAGGTGTGCAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: PERSSATLVVPSFCRCAGSCSLV*QVCRSP
Trigger: TGGGGACCTGCACACCTGCAAAACGAGGGAACAACT...ACCTGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGAGTTGTTCCCTCGTTTaGCAGGTGTGCAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: NALPERSSATLVVPSFCRSCSLV*QVCRSP
Trigger: TGGGGACCTGCACACCTGCAAAACGAGGGAACAACT...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp CAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGAGTCCTCCCTCTCCCTCCATaGGCTTCTTTTGAACTCTTG +
Preference number: 5 (lower is better)
Translates to: QGGLPRTPRHLPKQTVGVLPLPP*ASFELL
Trigger: CAAGAGTTCAAAAGAAGCCAATGGAGGGAGAGGGAG...GACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GACATGGCATTCATGGGAATAGTGGGGATGACGCCTGCTCCTGTTTGGTTTTGTGGTGGGAAGAGTGCTTaGGTGGTGGCACCTCTGATG +
Preference number: 5 (lower is better)
Translates to: DMAFMGIVGMTPAPVWFCGGKSA*VVAPLM
Trigger: CATCAGAGGTGCCACCACCAAAGCACTCTTCCCACC...ACAAAACCAAACAGGAGCAGGCGTCATCCCCACTATTCCCATGAATGCCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS TCA 90 bp TCTCCTTGTCTCCTGCACCTCAGGGGCAGGAGGAGGCAGAAACTCTaGACTGGACCTTCCTTCTCAGCTCCTCTGAGTTGTTCGTTAAAA +
Preference number: 5 (lower is better)
Translates to: SPCLLHLRGRRRQKL*TGPSFSAPLSCSLK
Trigger: TTTTAACGAACAACTCAGAGGAGCTGAGAAGGAAGGTCCAGTTCAGAGTTTCTGCCTCCTCCTGCCCCTGAGGTGCAGGAGACAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683064.1
CDS TCA 90 bp GAACCGACTGGTTCAGCATTCCTGAGAAACATGGTGAGTTGGATGTaGCAAAGTCAAAGCGAAAAGCCATGGGGGTCAGGAGCCCGTGGA +
Preference number: 5 (lower is better)
Translates to: EPTGSAFLRNMVSWM*QSQSEKPWGSGARG
Trigger: TCCACGGGCTCCTGACCCCCATGGCTTTTCGCTTTGACTTTGTCACATCCAACTCACCATGTTTCTCAGGAATGCTGAACCAGTCGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS-3UTR CAA 90 bp AACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGAGTCCTTTTTGGGTGCGTaGGCTTTCTTCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: NRKATVSGMQDCKREKAESFLGA*AFFFSR
Trigger: GCGGGAGAAGAAGAAAGCCAACGCACCCAAAAAGGA...CTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp TCTGGGCGGGAAGGACTGGACAGGGCGGTAAAGAAAGAACAGAAAAGCCACGGTACAGACTTCTCCTTTTaGGGTGCGTTGGCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SGREGLDRAVKKEQKSHGTDFSF*GALAFF
Trigger: GAAGAAAGCCAACGCACCCAAAAAGGAGAAGTCTGT...ACCGTGGCTTTTCTGTTCTTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCCAGGCTGCACCCTTGTaGAATGGATTTGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ANALPERSSATLVVPSFCQAAPL*NGFGSL
Trigger: CAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTG...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp TCCCTTGAAAGGGTTTTCTCCTCTCTGGCAGGGGTCTCAGTGCAAATGCTCCAAATCCCCTTTGCTCATTaGGGGGAAACTGAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SLERVFSSLAGVSVQMLQIPFAH*GETEAW
Trigger: CCAAGCCTCAGTTTCCCCCAAATGAGCAAAGGGGAT...TTGGAGCATTTGCACTGAGACCCCTGCCAGAGAGGAGAAAACCCTTTCAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp ACATCAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGCCCTCTTTATCCCCTTaGCTCATTTGGGGGAAACTG +
Preference number: 5 (lower is better)
Translates to: TSRWSTEDSSAFAKANSGPSLSP*LIWGKL
Trigger: CAGTTTCCCCCAAATGAGCAAAGGGGATAAAGAGGG...CCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GCGTGGTCAGGTAGATGCCGCTGTCTATGGCGTTGTTGTTCTGGTTGGGGGACGAATATCTATTGGCCATaGGTCCTATCGGTGTGTCTA +
Preference number: 5 (lower is better)
Translates to: AWSGRCRCLWRCCSGWGTNIYWP*VLSVCL
Trigger: TAGACACACCGATAGGACCAATGGCCAATAGATATT...CGTCCCCCAACCAGAACAACAACGCCATAGACAGCGGCATCTACCTGACCACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GAACAGAAAAGCCACGGTGAGCGGAATGCAAGACTGCAAAAGAGAGAAGGCCGATGGGCCCTAAGCTCTTaGAGACACGTGGTATGGAGT +
Preference number: 5 (lower is better)
Translates to: EQKSHGERNARLQKREGRWALSS*RHVVWS
Trigger: ACTCCATACCACGTGTCTCAAAGAGCTTAGGGCCCA...TCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS CCA 90 bp TTGTCTCCTGCACCTCAGGGGCAGGAGGAGGCAGAAACTCTGAACTaGACCTTCCTTCTCAGCTCCTCTGAGTTGTTCGTTAAAAATCAG +
Preference number: 5 (lower is better)
Translates to: LSPAPQGQEEAETLN*TFLLSSSELFVKNQ
Trigger: CTGATTTTTAACGAACAACTCAGAGGAGCTGAGAAGGAAGGTCCAGTTCAGAGTTTCTGCCTCCTCCTGCCCCTGAGGTGCAGGAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683064.1
CDS-3UTR CAA 90 bp AATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTCCTGCTTCTTAGCTTaGGTCTGGCTACTCTCCATG +
Preference number: 5 (lower is better)
Translates to: NALPERSSATLVVPSFCRSCFLA*VWLLSM
Trigger: CATGGAGAGTAGCCAGACCAAAGCTAAGAAGCAGGA...CCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349466.6
CDS-3UTR CAA 90 bp TGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGACAGACTTCTCCTTTTaGGGTGCGTTGGCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: CPARKVFSHLSCSLVLQVTDFSF*GALAFF
Trigger: GAAGAAAGCCAACGCACCCAAAAAGGAGAAGTCTGT...CACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp ATGAGGAGCCTGTGGCAGGCTGCACCCTTGTTGAATGGATTTGGGTCCTTGCAAGAACTTCACGAAGTATaGTACATAGACCGGCGTGCA +
Preference number: 5 (lower is better)
Translates to: MRSLWQAAPLLNGFGSLQELHEV*YIDRRA
Trigger: TGCACGCCGGTCTATGTACAATACTTCGTGAAGTTC...TTGCAAGGACCCAAATCCATTCAACAAGGGTGCAGCCTGCCACAGGCTCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp CCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAATGGATTTGGGTCCTaGCAAATGCCCTGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: PARKVFSHLSCSLVLQVCNGFGS*QMPCQK
Trigger: TTTCTGGCAGGGCATTTGCAAGGACCCAAATCCATT...GCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCACTGAACCGCTTCTCTaGAAGGTACTCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: ANALPERSSATLVVPSFCTEPLL*KVLTTS
Trigger: GGAGGTAGTGAGTACCTTCAAGAGAAGCGGTTCAGT...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp AATACGTTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGGAGCTCTCGTCGATCTaGAGGTCATTGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: NTFHKRIWLSRDTVWAGRELSSI*RSLAWM
Trigger: CATCCAGGCCAATGACCTCAAGATCGACGAGAGCTC...CCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAACGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCAGAACTTCACGAAGTATaGTACATAGACCGGCGTGCA +
Preference number: 5 (lower is better)
Translates to: LPERSSATLVVPSFCRCAELHEV*YIDRRA
Trigger: TGCACGCCGGTCTATGTACAATACTTCGTGAAGTTC...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp GCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAATGGATTTGGGTCCTaGCAAATGCCCTGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: ANALPERSSATLVVPSFCNGFGS*QMPCQK
Trigger: TTTCTGGCAGGGCATTTGCAAGGACCCAAATCCATT...GCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp TGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCTTCTCCTTCCTCCTTaGGACGAAGAACCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: CKCPARKVFSHLSCSLVLLLLPP*DEEPSP
Trigger: AGGAGAAGGTTCTTCGTCCAAAGGAGGAAGGAGAAG...CAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCTTGCTGTTCAAGATGTaGGTGCACTTTTTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLLLFKM*VHFFKR
Trigger: CCTCTTGAAAAAGTGCACCAACATCTTGAACAGCAA...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349466.6
ENST00000370186.5
CDS-3UTR CAA 90 bp ACAGAGAGTGAGAAGAAGCCGGTGAGTGCAGCAGCACGCAGCTCCAATTTCAACTTGCTGTTCAAGATGTaGGTGCACTTTTTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: TESEKKPVSAAARSSNFNLLFKM*VHFFKR
Trigger: CCTCTTGAAAAAGTGCACCAACATCTTGAACAGCAA...GTTGAAATTGGAGCTGCGTGCTGCTGCACTCACCGGCTTCTTCTCACTCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp CCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGTGGATGATGCCGCATTaGGCTGCGATGGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PQQMELPFFLLSFKQGHQWMMPH*AAMARA
Trigger: GGCCCGGGCCATCGCAGCCAAATGCGGCATCATCCA...CTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp CAAGGTGGTCTACCGAGGACTCCTCGGCATTTGCCAAAGCAAACAGTGGGAGTCACCAGAAAGATATTCTaGCAGTCTAGTTCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: QGGLPRTPRHLPKQTVGVTRKIF*QSSSLK
Trigger: TTTCAGGGAACTAGACTGCAAGAATATCTTTCTGGT...GACTCCCACTGTTTGCTTTGGCAAATGCCGAGGAGTCCTCGGTAGACCACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GATACGCTCCCCTCAGGACCTGGTGCTGAGCCACAAATCCATGACTTCATGGCTAGGGACAAAAATGGGTaGACCAGAAAGATATTCTTG +
Preference number: 5 (lower is better)
Translates to: DTLPSGPGAEPQIHDFMARDKNG*TRKIFL
Trigger: CAAGAATATCTTTCTGGTCAACCCATTTTTGTCCCT...AGCCATGAAGTCATGGATTTGTGGCTCAGCACCAGGTCCTGAGGGGAGCGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp TTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGAACTGAACCGCTTCTCTaGAAGGTACTCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: FHKRIWLSRDTVWAGRTGTEPLL*KVLTTS
Trigger: GGAGGTAGTGAGTACCTTCAAGAGAAGCGGTTCAGT...TCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp GGTCCTTGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTAAATAGTTCCTTATaGAAATACGCATCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: GPCKCPARKVFSHLSCSLVNSSL*KYASGH
Trigger: ATGGCCAGATGCGTATTTCAATAAGGAACTATTTAC...GAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCAAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp CTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGCAGGTGTGCACCTCAACAAATGGAGTaGCCCTTTTTCTTATTATCG +
Preference number: 5 (lower is better)
Translates to: LPERSSATLVVPSFCRCAPQQME*PFFLLS
Trigger: CGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG...TGCACACCTGCAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp TGCAAATGCCCTGCCAGAAAGGTCTTCAGCCACCTTAGTTGTTCCCTCGTTTTGAGCAGCAGTGAGGGTTaGCTTTTAATATCTATTGGC +
Preference number: 5 (lower is better)
Translates to: CKCPARKVFSHLSCSLVLSSSEG*LLISIG
Trigger: GCCAATAGATATTAAAAGCAAACCCTCACTGCTGCT...CAAAACGAGGGAACAACTAAGGTGGCTGAAGACCTTTCTGGCAGGGCATTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS CCA 90 bp CAAGCAGGTGTTTCGAATCAAAGAGAGCAGATGCTCTTACATAGCTaGCTAAAAGAACCGACTGGTTCAGCATTCCTGAGAAACATGGTG +
Preference number: 5 (lower is better)
Translates to: QAGVSNQREQMLLHS*LKEPTGSAFLRNMV
Trigger: CACCATGTTTCTCAGGAATGCTGAACCAGTCGGTTCTTTTAGCCAGCTATGTAAGAGCATCTGCTCTCTTTGATTCGAAACACCTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS-3UTR CAA 90 bp TTTCATAAAAGAATATGGCTTTCGAGAGACACCGTCTGGGCGGGAAGGACTGGATTGCTGTTCAAGATGTaGGTGCACTTTTTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: FHKRIWLSRDTVWAGRTGLLFKM*VHFFKR
Trigger: CCTCTTGAAAAAGTGCACCAACATCTTGAACAGCAA...TCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS-3UTR CAA 90 bp CCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGGGAACAGTTTACAAATGGGAGCTCTCGTCGATCTaGAGGTCATTGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: PFFLLSFKQGHQGTVYKWELSSI*RSLAWM
Trigger: CATCCAGGCCAATGACCTCAAGATCGACGAGAGCTC...CCATTTGTAAACTGTTCCCTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp CCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAAACAAGGACATCAGTCCTTTTTGGGTGCGTaGGCTTTCTTCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PQQMELPFFLLSFKQGHQSFLGA*AFFFSR
Trigger: GCGGGAGAAGAAGAAAGCCAACGCACCCAAAAAGGA...CTGATGTCCTTGTTTAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp GAAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTCTTCATGGCTTAAGCTaGGCCGCTGGACACAAAGAC +
Preference number: 5 (lower is better)
Translates to: EEHKDPQQMELPFFLLSFLHGLS*AAGHKD
Trigger: GTCTTTGTGTCCAGCGGCCAAGCTTAAGCCATGAAG...AAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS-3UTR CAA 90 bp AAGAACACAAAGACCCTCAACAAATGGAGTTGCCCTTTTTCTTATTATCGTTTAGCAGCACTGGTAGGATaGGCAGCAGAGAGAATTGCG +
Preference number: 5 (lower is better)
Translates to: KNTKTLNKWSCPFSYYRLAALVG*AAERIA
Trigger: CGCAATTCTCTCTGCTGCCAATCCTACCAGTGCTGC...TAAACGATAATAAGAAAAAGGGCAACTCCATTTGTTGAGGGTCTTTGTGTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370186.5
CDS GCA 72 bp CCCACCACCAGCGCAGCCACGGGGACCTGGAGGAGCTaGCCGTTCCGGATGACCGTGAACTTCTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: PTTSAATGTWRS*PFRMTVNFCSC
Trigger: GCAGGAGCAGAAGTTCACGGTCATCCGGAACGGGCAGCTCCTCCAGGTCCCCGTGGCTGCGCTGGTGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS GCA 72 bp AGCTCCTCGTCGGTCATCTCGTCCTTCCCGGGCCCGTaGCCGGCTTCCTTCAGGCACTTGAGCTGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SSSSVISSFPGP*PASFRHLSWLV
Trigger: CACCAGCCAGCTCAAGTGCCTGAAGGAAGCCGGGCACGGGCCCGGGAAGGACGAGATGACCGACGAGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS GCA 72 bp GTCTCAGCTGCTGGAAAACCTAACGTCGCCTTCGGCTaGGGCGGCAGGAGTGAAGTGGGCCGCCGAGGGGCA +
Preference number: 6 (lower is better)
Translates to: VSAAGKPNVAFG*GGRSEVGRRGA
Trigger: TGCCCCTCGGCGGCCCACTTCACTCCTGCCGCCGCAGCCGAAGGCGACGTTAGGTTTTCCAGCAGCTGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CCA 72 bp CTGGCCCACAGGGGAGGAACTTGGAGTCCTGGGAGGTaGAGTCTCCATCCTGGAGGACAGGGTGGGGTCGGG +
Preference number: 6 (lower is better)
Translates to: LAHRGGTWSPGR*SLHPGGQGGVG
Trigger: CCCGACCCCACCCTGTCCTCCAGGATGGAGACTCCACCTCCCAGGACTCCAAGTTCCTCCCCTGTGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS CCA 72 bp TGGGGGCCTGGCCCACAGGGGAGGAACTTGGAGTCCTaGGAGGTGGAGTCTCCATCCTGGAGGACAGGGTGG +
Preference number: 6 (lower is better)
Translates to: WGPGPQGRNLES*EVESPSWRTGW
Trigger: CCACCCTGTCCTCCAGGATGGAGACTCCACCTCCCAGGACTCCAAGTTCCTCCCCTGTGGGCCAGGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS CCA 72 bp CTCAGGCGGGCCCTGGCTCCGCAGCCAAGTGTGCAGTaGTGTCCTTACTCTGGCAGGACCTCAGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: LRRALAPQPSVQ*CPYSGRTSGRR
Trigger: CCTCCTCCCTGAGGTCCTGCCAGAGTAAGGACACCACTGCACACTTGGCTGCGGAGCCAGGGCCCGCCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS TCA 72 bp CTGTGGGTGAGGTCTTCAGCCTCCGGCAGAGCCCGCTaGCATCCCCGTAGGCCTCCTCGATCTTCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: LWVRSSASGRAR*HPRRPPRSSAA
Trigger: CGCTGCAGAAGATCGAGGAGGCCTACGGGGATGTCAGCGGGCTCTGCCGGAGGCTGAAGACCTCACCCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CCA 72 bp GACACGTGGTATGGAGTCGGCAGGAAGTCTACCGCGTaGTCAGTCCCGCATGTGGCCGGGGGCCTGGAGGAA +
Preference number: 6 (lower is better)
Translates to: DTWYGVGRKSTA*SVPHVAGGLEE
Trigger: TTCCTCCAGGCCCCCGGCCACATGCGGGACTGACCACGCGGTAGACTTCCTGCCGACTCCATACCACGTGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS CAA 72 bp GGTTGCCCTGAGGCTGGGTCCCTTGAGACTCGGCCCTaGAGACCACTGGGAGGGAACACAGGACCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: GCPEAGSLETRP*RPLGGNTGPRA
Trigger: TGCCCTGGGTCCTGTGTTCCCTCCCAGTGGTCTCAAGGGCCGAGTCTCAAGGGACCCAGCCTCAGGGCAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS GCA 72 bp ATCCTTCCCAGGCTACGCTGTGTTCGGTGCCTAGGATaGCAGCCTCGCCTCCCGGTTCTCAGCTGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: ILPRLRCVRCLG*QPRLPVLSWRG
Trigger: GCCTCTCCAGCTGAGAACCGGGAGGCGAGGCTGGCATCCTAGGCACCGAACACAGCGTAGCCTGGGAAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CAA 90 bp CCATGTCGCCCATGCTGCCTGTCAGGCCTTCTCACAAGTGCAATCTaGGCTCAGCCACAGCTAGGGACAGGCGGCCACCCACGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: PCRPCCLSGLLTSAI*AQPQLGTGGHPRSQ
Trigger: CTGGGACCGTGGGTGGCCGCCTGTCCCTAGCTGTGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CAA 90 bp AGGGAGTGGGGTTGCCCTGAGGCTGGGTCCCTTGAGACTCGGCCCTaGAGACCACTGGGAGGGAACACAGGACCCAGGGCACCAAGAACA +
Preference number: 6 (lower is better)
Translates to: REWGCPEAGSLETRP*RPLGGNTGPRAPRT
Trigger: TGTTCTTGGTGCCCTGGGTCCTGTGTTCCCTCCCAGTGGTCTCAAGGGCCGAGTCTCAAGGGACCCAGCCTCAGGGCAACCCCACTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CCA 72 bp AGGAACTTGGAGTCCTGGGAGGTGGAGTCTCCATCCTaGAGGACAGGGTGGGGTCGGGGTGCTCTGCTAACC +
Preference number: 6 (lower is better)
Translates to: RNLESWEVESPS*RTGWGRGALLT
Trigger: GGTTAGCAGAGCACCCCGACCCCACCCTGTCCTCCAGGATGGAGACTCCACCTCCCAGGACTCCAAGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS CAA 90 bp GGGGTACCACTGACACCACTGATGCTTCAGGTCAGGGCAGGGCTGTaGTCTCAGCTGCTGGAAAACCTAACGTCGCCTTCGGCTGCGGCG +
Preference number: 6 (lower is better)
Translates to: GVPLTPLMLQVRAGL*SQLLENLTSPSAAA
Trigger: CGCCGCAGCCGAAGGCGACGTTAGGTTTTCCAGCAGCTGAGACAACAGCCCTGCCCTGACCTGAAGCATCAGTGGTGTCAGTGGTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS GCA 72 bp CCAGTGGTGCTGTCGATAATCCCTTTGACCAGTGTGTaGTTGTCGGTGGGAGACGACCGGGCCAGCACCCTC +
Preference number: 6 (lower is better)
Translates to: PVVLSIIPLTSV*LSVGDDRASTL
Trigger: GAGGGTGCTGGCCCGGTCGTCTCCCACCGACAAGCACACACTGGTCAAAGGGATTATCGACAGCACCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS GCA 72 bp GGGGTCAGGAGCCCGTGGAAGAGTCGGATCGGCTGGTaGCAAGGGGAAAGAGTGCACCCTGTTTCCTCATAC +
Preference number: 6 (lower is better)
Translates to: GVRSPWKSRIGW*QGERVHPVSSY
Trigger: GTATGAGGAAACAGGGTGCACTCTTTCCCCTTGGCACCAGCCGATCCGACTCTTCCACGGGCTCCTGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CCA 72 bp GCTGCTGGGGCTTGGGGTGGAACTCGATGGAACTATTaGCCATGTCGCCCATGCTGCCTGTCAGGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: AAGAWGGTRWNY*PCRPCCLSGLL
Trigger: GAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGCCCCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CCA 72 bp CATCCCGCTGCTGCTGGGGCTTGGGGTGGAACTCGATaGAACTATTGGCCATGTCGCCCATGCTGCCTGTCA +
Preference number: 6 (lower is better)
Translates to: HPAAAGAWGGTR*NYWPCRPCCLS
Trigger: TGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGCCCCAGCAGCAGCGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CCA 72 bp TCTGCCCGTAGATCTGCCTGCGCTTCTCCAGGTCATTaGTGTTGTCCGCCAGGCCCTCTGTGGGTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: SARRSACASPGH*CCPPGPLWVRS
Trigger: AGACCTCACCCACAGAGGGCCTGGCGGACAACACCAATGACCTGGAGAAGCGCAGGCAGATCTACGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CCA 72 bp ATGGGGGTCAGGAGCCCGTGGAAGAGTCGGATCGGCTaGTGCCAAGGGGAAAGAGTGCACCCTGTTTCCTCA +
Preference number: 6 (lower is better)
Translates to: MGVRSPWKSRIG*CQGERVHPVSS
Trigger: TGAGGAAACAGGGTGCACTCTTTCCCCTTGGCACCAGCCGATCCGACTCTTCCACGGGCTCCTGACCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CAA 72 bp CCATGCTGCCTGTCAGGCCTTCTCACAAGTGCAATCTaGGCTCAGCCACAGCTAGGGACAGGCGGCCACCCA +
Preference number: 6 (lower is better)
Translates to: PCCLSGLLTSAI*AQPQLGTGGHP
Trigger: TGGGTGGCCGCCTGTCCCTAGCTGTGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CAA 72 bp GTGGTGCTGTCGATAATCCCTTTGACCAGTGTGTGCTaGTCGGTGGGAGACGACCGGGCCAGCACCCTCAGC +
Preference number: 6 (lower is better)
Translates to: VVLSIIPLTSVC*SVGDDRASTLS
Trigger: GCTGAGGGTGCTGGCCCGGTCGTCTCCCACCGACAAGCACACACTGGTCAAAGGGATTATCGACAGCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CAA 90 bp ACATCCCGCTGCTGCTGGGGCTTGGGGTGGAACTCGATGGAACTATaGGCCATGTCGCCCATGCTGCCTGTCAGGCCTTCTCACAAGTGC +
Preference number: 6 (lower is better)
Translates to: TSRCCWGLGWNSMEL*AMSPMLPVRPSHKC
Trigger: GCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGCCCCAGCAGCAGCGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS TCA 72 bp TGGCTGAGGACCGAAGACCGCCGGCGCACAGCACCCTaGACTGAACCGCTTCTCTTGAAGGTACTCACTACC +
Preference number: 6 (lower is better)
Translates to: WLRTEDRRRTAP*TEPLLLKVLTT
Trigger: GGTAGTGAGTACCTTCAAGAGAAGCGGTTCAGTTCAGGGTGCTGTGCGCCGGCGGTCTTCGGTCCTCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
CDS GCA 72 bp ATGTCGCCCATGCTGCCTGTCAGGCCTTCTCACAAGTaGAATCTTGGCTCAGCCACAGCTAGGGACAGGCGG +
Preference number: 6 (lower is better)
Translates to: MSPMLPVRPSHK*NLGSATARDRR
Trigger: CCGCCTGTCCCTAGCTGTGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS CCA 72 bp GGACACTGGGCCCTAAGCTCTTTGAGACACGTGGTATaGAGTCGGCAGGAAGTCTACCGCGTGGTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: GHWALSSLRHVV*SRQEVYRVVSP
Trigger: GGGACTGACCACGCGGTAGACTTCCTGCCGACTCCATACCACGTGTCTCAAAGAGCTTAGGGCCCAGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS CAA 72 bp TGCTGCTGGGGCTTGGGGTGGAACTCGATGGAACTATaGGCCATGTCGCCCATGCTGCCTGTCAGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: CCWGLGWNSMEL*AMSPMLPVRPS
Trigger: AGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGCCCCAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS GCA 72 bp GGAGTCTCCATCCTGGAGGACAGGGTGGGGTCGGGGTaGTCTGCTAACCCTCACTGTCTTCATGAATGCAAC +
Preference number: 6 (lower is better)
Translates to: GVSILEDRVGSG*SANPHCLHECN
Trigger: GTTGCATTCATGAAGACAGTGAGGGTTAGCAGAGCACCCCGACCCCACCCTGTCCTCCAGGATGGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS TCA 72 bp GCCGGCGCACAGCACCCTGAACTGAACCGCTTCTCTTaGAGGTACTCACTACCTCCATCTGCGTCTGAATCC +
Preference number: 6 (lower is better)
Translates to: AGAQHPELNRFS*RYSLPPSASES
Trigger: GGATTCAGACGCAGATGGAGGTAGTGAGTACCTTCAAGAGAAGCGGTTCAGTTCAGGGTGCTGTGCGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
CDS CCA 72 bp TTTGGCGGCGGTGAGAAAGCTGCTAAGCGTGGACACTaGGCCCTAAGCTCTTTGAGACACGTGGTATGGAGT +
Preference number: 6 (lower is better)
Translates to: FGGGEKAAKRGH*ALSSLRHVVWS
Trigger: ACTCCATACCACGTGTCTCAAAGAGCTTAGGGCCCAGTGTCCACGCTTAGCAGCTTTCTCACCGCCGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393842.5
CDS GCA 72 bp GGAACTCGATGGAACTATTGGCCATGTCGCCCATGCTaGCTGTCAGGCCTTCTCACAAGTGCAATCTTGGCT +
Preference number: 6 (lower is better)
Translates to: GTRWNYWPCRPC*LSGLLTSAILA
Trigger: AGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS GCA 72 bp GGTGGAACTCGATGGAACTATTGGCCATGTCGCCCATaGTGCCTGTCAGGCCTTCTCACAAGTGCAATCTTG +
Preference number: 6 (lower is better)
Translates to: GGTRWNYWPCRP*CLSGLLTSAIL
Trigger: CAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS GCA 72 bp ACCCTGTTTCCTCATACGCAAAACAGGGGACTCAGCTaGCCGTGTCTCTGTGAGCACCGACAATTGGAACAG +
Preference number: 6 (lower is better)
Translates to: TLFPHTQNRGLS*PCLCEHRQLEQ
Trigger: CTGTTCCAATTGTCGGTGCTCACAGAGACACGGGCAGCTGAGTCCCCTGTTTTGCGTATGAGGAAACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CCA 72 bp ACCCAGGGCACCAAGAACAGCTTTGTGCAAGTTGCATaGATGATTCTTTGGGACAGGCCCTTGGTGATGTGT +
Preference number: 6 (lower is better)
Translates to: TQGTKNSFVQVA*MILWDRPLVMC
Trigger: ACACATCACCAAGGGCCTGTCCCAAAGAATCATCCATGCAACTTGCACAAAGCTGTTCTTGGTGCCCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS TCA 72 bp TCTCAGGAGGTAGTATTTTGGTGGTATAGGCACTGTTaGTGGAGATGGCATGGACCAGGAGGTCGAGGATCT +
Preference number: 6 (lower is better)
Translates to: SQEVVFWWYRHC*WRWHGPGGRGS
Trigger: AGATCCTCGACCTCCTGGTCCATGCCATCTCCATCAACAGTGCCTATACCACCAAAATACTACCTCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263519.5
ENST00000349466.6
ENST00000359149.8
ENST00000370186.5
ENST00000393842.5
ENST00000683064.1
ENST00000684004.1
CDS GCA 72 bp GTTAGTATGGAACCATGGTGCGAGCAGGTTACAAAATaGCTTCACTTAGCAACAGAAAAGCTTGTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: VSMEPWCEQVTK*LHLATEKLVPA
Trigger: GGCCGGCACAAGCTTTTCTGTTGCTAAGTGAAGGCATTTTGTAACCTGCTCGCACCATGGTTCCATACTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CCA 72 bp GACACCCTGTCCATCTGGTGCGTTGATATGTTAGTATaGAACCATGGTGCGAGCAGGTTACAAAATGCCTTC +
Preference number: 6 (lower is better)
Translates to: DTLSIWCVDMLV*NHGASRLQNAF
Trigger: GAAGGCATTTTGTAACCTGCTCGCACCATGGTTCCATACTAACATATCAACGCACCAGATGGACAGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CAA 72 bp ACCGACTGGTTCAGCATTCCTGAGAAACATGGTGAGTaGGATGTGACAAAGTCAAAGCGAAAAGCCATGGGG +
Preference number: 6 (lower is better)
Translates to: TDWFSIPEKHGE*DVTKSKRKAMG
Trigger: CCCCATGGCTTTTCGCTTTGACTTTGTCACATCCAACTCACCATGTTTCTCAGGAATGCTGAACCAGTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS GCA 72 bp ACTCTTTTATTCTGGAATGACACCCTGTCCATCTGGTaGGTTGATATGTTAGTATGGAACCATGGTGCGAGC +
Preference number: 6 (lower is better)
Translates to: TLLFWNDTLSIW*VDMLVWNHGAS
Trigger: GCTCGCACCATGGTTCCATACTAACATATCAACGCACCAGATGGACAGGGTGTCATTCCAGAATAAAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CCA 72 bp AGGACTCTTTTATTCTGGAATGACACCCTGTCCATCTaGTGCGTTGATATGTTAGTATGGAACCATGGTGCG +
Preference number: 6 (lower is better)
Translates to: RTLLFWNDTLSI*CVDMLVWNHGA
Trigger: CGCACCATGGTTCCATACTAACATATCAACGCACCAGATGGACAGGGTGTCATTCCAGAATAAAAGAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1
CDS CCA 72 bp GTTTCGAATCAAAGAGAGCAGATGCTCTTACATAGCTaGCTAAAAGAACCGACTGGTTCAGCATTCCTGAGA +
Preference number: 6 (lower is better)
Translates to: VSNQREQMLLHS*LKEPTGSAFLR
Trigger: TCTCAGGAATGCTGAACCAGTCGGTTCTTTTAGCCAGCTATGTAAGAGCATCTGCTCTCTTTGATTCGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684004.1