Pregenerated sensors for ATP2B2-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000236999

Ensembl transcript IDs: ENST00000440152.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GAGGCAGGGCAGGATTCAGTACAGGGCCTTTGTTTCTATCCACTGTaGTGGTGGCTCTTGGTCCCATTGGATCCAACATCATTTTACTTT	+
Preference number: 5 (lower is better) Translates to: EAGQDSVQGLCFYPL*WWLLVPLDPTSFYF Trigger: AAAGTAAAATGATGTTGGATCCAATGGGACCAAGAGCCACCAGCACAGTGGATAGAAACAAAGGCCCTGTACTGAATCCTGCCCTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440152.1
CDS CCA 72 bp	TCAGTACAGGGCCTTTGTTTCTATCCACTGTGCTGGTaGCTCTTGGTCCCATTGGATCCAACATCATTTTAC	+
Preference number: 6 (lower is better) Translates to: SVQGLCFYPLCW*LLVPLDPTSFY Trigger: GTAAAATGATGTTGGATCCAATGGGACCAAGAGCCACCAGCACAGTGGATAGAAACAAAGGCCCTGTACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440152.1
CDS CCA 72 bp	GATTCAGTACAGGGCCTTTGTTTCTATCCACTGTGCTaGTGGCTCTTGGTCCCATTGGATCCAACATCATTT	+
Preference number: 6 (lower is better) Translates to: DSVQGLCFYPLC*WLLVPLDPTSF Trigger: AAATGATGTTGGATCCAATGGGACCAAGAGCCACCAGCACAGTGGATAGAAACAAAGGCCCTGTACTGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440152.1

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