RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000070961

Ensembl transcript IDs: ENST00000261173.6, ENST00000359142.7, ENST00000393164.6, ENST00000428670.8, ENST00000549585.1, ENST00000549727.1, ENST00000550716.1, ENST00000551009.5, ENST00000551310.1, ENST00000552275.1, ENST00000635033.1

Found 603 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAAATAATAAAAGGCTCAGTGGCTAAAATAGATGGTAAGCATCATTaGAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGT +
Preference number: 1 (lower is better)
Translates to: QIIKGSVAKIDGKHH*KKSTPSRYLSWLTR
Trigger: ACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGATGCTTACCATCTATTTTAGCCACTGAGCCTTTTATTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR CCA 90 bp AAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATaGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAAT +
Preference number: 1 (lower is better)
Translates to: KHVLLLLHRCHKTRL*IRVGVESHCLELKN
Trigger: ATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR TCA 90 bp GGCTCTGAATCTTCTATCCTAAACTCAGGATGTGTCATAAAGTTGTaGATCGAACTTCTTGATTCCGGTTTTTCTAACCCTTCATATAAA +
Preference number: 1 (lower is better)
Translates to: GSESSILNSGCVIKL*IELLDSGFSNPSYK
Trigger: TTTATATGAAGGGTTAGAAAAACCGGAATCAAGAAGTTCGATTCACAACTTTATGACACATCCTGAGTTTAGGATAGAAGATTCAGAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359142.7
3UTR-3UTR TCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTGGGCTTCCTGGGGATaGAGAGGTAGCAGACTTGTT +
Preference number: 2 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSWASWG*RGSRLV
Trigger: AACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCA...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359142.7
3UTR-3UTR GCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTCACTGTTCAGGACCATaGTTGGGTACTACTGATGAT +
Preference number: 2 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSHCSGP*LGTTDD
Trigger: ATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTG...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR GCA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTCAGGGCTCTTTGTCTTaGCCAGTTTTACTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCQGSLS*PVLLLP
Trigger: AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTG...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGGGCTGTTACCATCTTaGAATGTATTCCAATTGTGG +
Preference number: 2 (lower is better)
Translates to: PYALWALQLIGSIFRVERGLLPS*NVFQLW
Trigger: CCACAATTGGAATACATTTCAAGATGGTAACAGCCC...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR GCA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAATGCCAACAGCCCTCATaGTGTGTGAAGGTCTCTAAA +
Preference number: 2 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKCQQPS*CVKVSK
Trigger: TTTAGAGACCTTCACACAGCATGAGGGCTGTTGGCA...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR CCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGAAAGCACCCTCAGTCTaGCAGAAAGCTTTGCTTTTT +
Preference number: 2 (lower is better)
Translates to: PYALWALQLIGSIFRVERKAPSV*QKALLF
Trigger: AAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTT...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCGTCCATCACAATATGTaGAAAGACCCAGTTTCAATT +
Preference number: 2 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVVHHNM*KDPVSI
Trigger: AATTGAAACTGGGTCTTTTCACATATTGTGATGGAC...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR TCA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGGATTGTGTATCTGGTaGAATCTGGGCCCTAACACA +
Preference number: 2 (lower is better)
Translates to: LWALQLIGSIFRVERVLQGLCIW*NLGPNT
Trigger: TGTGTTAGGGCCCAGATTTCACCAGATACACAATCC...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR GCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGCACTGTTCAGGACCATaGTTGGGTACTACTGATGAT +
Preference number: 2 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQHCSGP*LGTTDD
Trigger: ATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTG...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR GCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAACAGGGCTCTTTGTCTTaGCCAGTTTTACTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: SLKEINTITVSQLAYTCKQGSLS*PVLLLP
Trigger: AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTG...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR CAA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTaGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGCAC +
Preference number: 2 (lower is better)
Translates to: YQQGIKAVLHGAVTI*KCIPIVVKENRLMH
Trigger: GTGCATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR GCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTTGCCAACAGCCCTCATaGTGTGTGAAGGTCTCTAAA +
Preference number: 2 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSCQQPS*CVKVSK
Trigger: TTTAGAGACCTTCACACAGCATGAGGGCTGTTGGCA...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAGCCCTCATGCTGTGTaGAGGTCTCTAAAGATTAGA +
Preference number: 2 (lower is better)
Translates to: SLKEINTITVSQLAYTCKSPHAV*RSLKIR
Trigger: TCTAATCTTTAGAGACCTTCACACAGCATGAGGGCT...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR GCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAACACTGTTCAGGACCATaGTTGGGTACTACTGATGAT +
Preference number: 2 (lower is better)
Translates to: SLKEINTITVSQLAYTCKHCSGP*LGTTDD
Trigger: ATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTG...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR GCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGATTTCTCTATTCCCTATaGCTTGTGGGCTCTCCAGTT +
Preference number: 2 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGFLYSL*LVGSPV
Trigger: AACTGGAGAGCCCACAAGGCATAGGGAATAGAGAAA...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR CCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCGCTAAAGAATCCAATTaGCTTAGAGGTGGGCATTCT +
Preference number: 2 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPAKESN*LRGGHS
Trigger: AGAATGCCCACCTCTAAGCCAATTGGATTCTTTAGC...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR CCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCATTGTTATTTTTGTTaGGAGAGGGTGGAGGACTGG +
Preference number: 2 (lower is better)
Translates to: SPKTRILACPSQYVKRPSHCYFC*ERVEDW
Trigger: CCAGTCCTCCACCCTCTCCCAACAAAAATAACAATG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359142.7
3UTR CAA 90 bp AACATTTCCCTTTTCTCTATTCCCTATGCCTTGTGGGCTCTCCAGTaGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGT +
Preference number: 2 (lower is better)
Translates to: NISLFSIPYALWALQ*IGSIFRVERVLQDS
Trigger: ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGGAATAGAGAAAAGGGAAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAAGTCCATCACAATATGTaGAAAGACCCAGTTTCAATT +
Preference number: 2 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKVHHNM*KDPVSI
Trigger: AATTGAAACTGGGTCTTTTCACATATTGTGATGGAC...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAAAAGTGTGTCTTCTGTTaGAGTCCAAAGACAAGAATA +
Preference number: 2 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKKCVFC*SPKTRI
Trigger: TATTCTTGTCTTTGGACTTCAACAGAAGACACACTT...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGAACAGGTCACTTACGCTaGGTTACTGTTTATCTGTCA +
Preference number: 2 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGTGHLR*VTVYLS
Trigger: TGACAGATAAACAGTAACTCAGCGTAAGTGACCTGT...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACGGATTGTGTATCTGGTaGAATCTGGGCCCTAACACA +
Preference number: 2 (lower is better)
Translates to: LWIRVGVESHCLELKNEYGLCIW*NLGPNT
Trigger: TGTGTTAGGGCCCAGATTTCACCAGATACACAATCC...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGATCAATAAGGGGGATATaGGGCTCTGAATCTTCTATC +
Preference number: 2 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGSIRGI*GSESSI
Trigger: GATAGAAGATTCAGAGCCTCATATCCCCCTTATTGA...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359142.7
3UTR-3UTR TCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTATTTCTATTGTAAGGTaGATTCCACTGTCAACAGCA +
Preference number: 2 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSISIVR*IPLSTA
Trigger: TGCTGTTGACAGTGGAATTCACCTTACAATAGAAAT...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359142.7
3UTR-3UTR CCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGAAAGCACCCTCAGTCTaGCAGAAAGCTTTGCTTTTT +
Preference number: 2 (lower is better)
Translates to: AVTILKCIPIVVKENRLMKAPSV*QKALLF
Trigger: AAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTT...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR GCA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTGGACTAATTTTTCTCTaGATCAGTTATAAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCGLIFL*ISYKEA
Trigger: AGCTTCCTTATAACTGATGCAGAGAAAAATTAGTCC...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR GCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTCTGGGCCCTAACACATaGCAGTTTCTAAAGGGTAAA +
Preference number: 2 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFLGPNT*QFLKGK
Trigger: TTTACCCTTTAGAAACTGGCATGTGTTAGGGCCCAG...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGAAGTGTGTCTTCTGTTaGAGTCCAAAGACAAGAATA +
Preference number: 2 (lower is better)
Translates to: AVTILKCIPIVVKENRLMKCVFC*SPKTRI
Trigger: TATTCTTGTCTTTGGACTTCAACAGAAGACACACTT...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGTGTGTCTTCTGTTaGAGTCCAAAGACAAGAATA +
Preference number: 2 (lower is better)
Translates to: SLKEINTITVSQLAYTCKKCVFC*SPKTRI
Trigger: TATTCTTGTCTTTGGACTTCAACAGAAGACACACTT...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR TCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTGGGCTGTTACCATCTTaGAATGTATTCCAATTGTGG +
Preference number: 2 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFGLLPS*NVFQLW
Trigger: CCACAATTGGAATACATTTCAAGATGGTAACAGCCC...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR GCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTCCTGCAGAGGATTACTaGAAAGATTTGATGGTGAGA +
Preference number: 2 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFPAEDY*KDLMVR
Trigger: TCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGG...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR GCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAGGTGTAGAAAGCCATTaGCTTGAGTTGAAAAATGAA +
Preference number: 2 (lower is better)
Translates to: SLKEINTITVSQLAYTCKGVESH*LELKNE
Trigger: TTCATTTTTCAACTCAAGGCAATGGCTTTCTACACC...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR CAA 90 bp GTACAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTaGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: VQVCLLLKSKDKNTS*SITICEKTQFQFVS
Trigger: AGAAACAAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR GCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTTGTGTTTCTAAGACCTaGAGAGGATTACTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFCVSKT*RGLLQR
Trigger: TCTTTGCAGTAATCCTCTGCAGGTCTTAGAAACACA...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR CAA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGACGATCCAGGGCTCTTaGTCTTGCCCAGTTTTACTC +
Preference number: 3 (lower is better)
Translates to: PYALWALQLIGSIFRVERTIQGS*SCPVLL
Trigger: GAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGT...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR CAA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTTGTTCAGGACCATGCTaGGGTACTACTGATGATCCA +
Preference number: 3 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSCSGPC*GTTDDP
Trigger: TGGATCATCAGTAGTACCCAAGCATGGTCCTGAACA...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR CAA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAACCAGGGCTCTTTGTCTaGCCCAGTTTTACTCCTCCC +
Preference number: 3 (lower is better)
Translates to: LWALQLIGSIFRVERVLQPGLFV*PSFTPP
Trigger: GGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGG...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR CAA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCACGATCCAGGGCTCTTaGTCTTGCCCAGTTTTACTC +
Preference number: 3 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPTIQGS*SCPVLL
Trigger: GAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGT...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR CAA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCAAGTGTGTCTTCTGTaGAAGTCCAAAGACAAGAAT +
Preference number: 3 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPQVCLL*KSKDKN
Trigger: ATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR CAA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTTGTGAATCGAACTTCTaGATTCCGGTTTTTCTAACC +
Preference number: 3 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPCESNF*IPVFLT
Trigger: GGTTAGAAAAACCGGAATCAAGAAGTTCGATTCACA...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359142.7
3UTR-3UTR CAA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTGTTCAGGACCATGCTaGGGTACTACTGATGATCCA +
Preference number: 3 (lower is better)
Translates to: SPKTRILACPSQYVKRPSCSGPC*GTTDDP
Trigger: TGGATCATCAGTAGTACCCAAGCATGGTCCTGAACA...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR CAA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCAGACCCAGTTTCAATTaGTTTCTTTACAATGCAGCT +
Preference number: 3 (lower is better)
Translates to: CLGTTDDPQVTYAELLFIRPSFN*FLYNAA
Trigger: AGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCT...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR CAA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTAGACCCAGTTTCAATTaGTTTCTTTACAATGCAGCT +
Preference number: 3 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCRPSFN*FLYNAA
Trigger: AGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCT...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR CAA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTCAAGTGTGTCTTCTGTaGAAGTCCAAAGACAAGAAT +
Preference number: 3 (lower is better)
Translates to: TDDPQVTYAELLFICQFIQVCLL*KSKDKN
Trigger: ATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR CAA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTGGGGCTGTTACCATCTaGAAATGTATTCCAATTGTG +
Preference number: 3 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSGAVTI*KCIPIV
Trigger: CACAATTGGAATACATTTCAAGATGGTAACAGCCCC...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR TCA 72 bp GAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTaGAATGTATTCCAATTGTGGTCAAAGAGAACAGAC +
Preference number: 3 (lower is better)
Translates to: ELKRYFMGLLPS*NVFQLWSKRTD
Trigger: GTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR TCA 72 bp AAAGGCTCAGTGGCTAAAATAGATGGTAAGCATCATTaGAAGAAATCAACACCATCACGGTATCTCAGTTGG +
Preference number: 3 (lower is better)
Translates to: KGSVAKIDGKHH*KKSTPSRYLSW
Trigger: CCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGATGCTTACCATCTATTTTAGCCACTGAGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR CCA 72 bp TTGCTACTACTTCATAGATGTCATAAGACCCGTTTATaGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAG +
Preference number: 3 (lower is better)
Translates to: LLLLHRCHKTRL*IRVGVESHCLE
Trigger: CTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR-3UTR CAA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTAGACCCAGTTTCAATTaGTTTCTTTACAATGCAGCT +
Preference number: 3 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLRPSFN*FLYNAA
Trigger: AGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCT...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
3UTR-3UTR CAA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGAGAAGAGGTAGCAGACTaGTTCATTTCTATTGTAAGG +
Preference number: 3 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGEEVAD*FISIVR
Trigger: CCTTACAATAGAAATGAACAAGTCTGCTACCTCTTC...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359142.7
3UTR-3UTR CAA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTGACAAGAATACTAGCTaGTCCATCACAATATGTGAA +
Preference number: 3 (lower is better)
Translates to: SPKTRILACPSQYVKRPSDKNTS*SITICE
Trigger: TTCACATATTGTGATGGACAAGCTAGTATTCTTGTC...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
3UTR TCA 72 bp TCTTCTATCCTAAACTCAGGATGTGTCATAAAGTTGTaGATCGAACTTCTTGATTCCGGTTTTTCTAACCCT +
Preference number: 3 (lower is better)
Translates to: SSILNSGCVIKL*IELLDSGFSNP
Trigger: AGGGTTAGAAAAACCGGAATCAAGAAGTTCGATTCACAACTTTATGACACATCCTGAGTTTAGGATAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359142.7
3UTR-3UTR CAA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTGACAAGAATACTAGCTaGTCCATCACAATATGTGAA +
Preference number: 3 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFDKNTS*SITICE
Trigger: TTCACATATTGTGATGGACAAGCTAGTATTCTTGTC...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR TCA 72 bp AAAATAAATCTACATTCGTACAAGTGTGTCTTCTGTTaGAGTCCAAAGACAAGAATACTAGCTTGTCCATCA +
Preference number: 3 (lower is better)
Translates to: KINLHSYKCVFC*SPKTRILACPS
Trigger: TGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTACGCGGAGGTGCAGCTaGACCTCGGGGATGGGGCGG +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSTRRCS*TSGMGR
Trigger: CCGCCCCATCCCCGAGGTGCAGCTGCACCTCCGCGT...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428670.8
CDS-3UTR CCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTGGGAAACGCAGAGGATaGGGGCTCCGTCCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPGKRRG*GLRPQR
Trigger: GCGCTGAGGACGGAGCCCCCATCCTCTGCGTTTCCC...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428670.8
CDS-3UTR GCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCGGCGCCACGCGGAGGTaGAGCTGCACCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFGATRR*SCTSGM
Trigger: CATCCCCGAGGTGCAGCTGCACCTCCGCGTGGCGCC...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428670.8
CDS-3UTR CCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCATCATGATGCTGGCTaGCGATGGAGGGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPHHDAG*RWRVAA
Trigger: GGCGGCAACCCTCCATCGCCAGCCAGCATCATGATG...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359142.7
CDS-3UTR GCA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCGAGAGCCCGCAGCTCTaGGAGCGTAATTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVESPQL*ERNSKV
Trigger: GACTTTGGAATTACGCTCGCAGAGCTGCGGGCTCTC...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTGCTGCACCTCGGGGATaGGGCGGCCAAGGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFAAPRG*GGQGAE
Trigger: CTCGGCTCCTTGGCCGCCCCATCCCCGAGGTGCAGC...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428670.8
CDS-3UTR TCA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACACCACTCGAATATCATaGTGCTGGCTGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYTTRIS*CWLAME
Trigger: CTCCATCGCCAGCCAGCATCATGATATTCGAGTGGT...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635033.1
CDS-3UTR GCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCAGTGGGTGGTTCCGTTaGCAGAGCCAGGGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPSGWFR*QSQGSE
Trigger: CTCGCTTCCCTGGCTCTGGCAACGGAACCACCCACT...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAAGTGGGTGGTTCCGTTaGCAGAGCCAGGGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: LWALQLIGSIFRVERVLQSGWFR*QSQGSE
Trigger: CTCGCTTCCCTGGCTCTGGCAACGGAACCACCCACT...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGCTACAACCTGGCGTTaGTCTGAGACAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERATTWR*SETVLS
Trigger: TGACAGCACTGTCTCAGACCAACGCCAGGTTGTAGC...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCCATCTCGCCCGGCAGTaGGAACCATTTTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPHLARQ*EPFSEG
Trigger: CCCCTCGGAAAATGGTTCCCACTGCCGGGCGAGATG...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428670.8
CDS-3UTR TCA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCAGCCATGGTCTTTTCTaGACCCAGAAGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVSHGLF*TQKVSM
Trigger: CATTGACACCTTCTGGGTTCAGAAAAGACCATGGCT...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGAAGCCAGTGAGATCGTaGCTGCAAGTGGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERKPVRS*LQVEDL
Trigger: AAGGTCTTCCACTTGCAGTCACGATCTCACTGGCTT...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTGGTTCTCAAGCCTTCTaGTGCCATCGGTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSGSQAF*CHRFNH
Trigger: GTGATTGAACCGATGGCATCAGAAGGCTTGAGAACC...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCAACCTGGCGTTGGTCTaGGACAGTGCTGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVNLALV*DSAVNY
Trigger: ATAATTGACAGCACTGTCTCAGACCAACGCCAGGTT...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAAGAGAGCCCGCAGCTCTaGGAGCGTAATTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKESPQL*ERNSKV
Trigger: GACTTTGGAATTACGCTCGCAGAGCTGCGGGCTCTC...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCTCACTCTTCAATGGCTaGATTTCCATGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVSLFNG*ISMAAP
Trigger: TGGTGCAGCCATGGAAATGCAGCCATTGAAGAGTGA...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAAGCAAGAGAGACTCAGTaGGTGGTTCCGTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKARETQ*VVPLPE
Trigger: CTCTGGCAACGGAACCACCCACTGAGTCTCTCTTGC...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTGCAAGAGAGACTCAGTaGGTGGTTCCGTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSARETQ*VVPLPE
Trigger: CTCTGGCAACGGAACCACCCACTGAGTCTCTCTTGC...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTCTAAACCACAAGATTTaGCCACGCCGCAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSLNHKI*PRRNSL
Trigger: AAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAG...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTATTCCCTATGCCTTGTaGGCTCTCCAGTTGATAGGG +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSIPYAL*ALQLIG
Trigger: CCCTATCAACTGGAGAGCCCACAAGGCATAGGGAAT...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCGGTTCTCAAGCCTTCTaGTGCCATCGGTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: CLGTTDDPQVTYAELLFIGSQAF*CHRFNH
Trigger: GTGATTGAACCGATGGCATCAGAAGGCTTGAGAACC...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGAGAGCCCGCAGCTCTaGGAGCGTAATTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLESPQL*ERNSKV
Trigger: GACTTTGGAATTACGCTCGCAGAGCTGCGGGCTCTC...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTTCACTCTTCAATGGCTaGATTTCCATGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPSLFNG*ISMAAP
Trigger: TGGTGCAGCCATGGAAATGCAGCCATTGAAGAGTGA...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCTGGTTCTGGTTCTCCTaGTGGAAAATCTCTGAATGC +
Preference number: 4 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVWFWFS*WKISEC
Trigger: GCATTCAGAGATTTTCCAGCAGGAGAACCAGAACCA...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCCTAAACCACAAGATTTaGCCACGCCGCAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: CLGTTDDPQVTYAELLFILNHKI*PRRNSL
Trigger: AAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAG...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCAGGACCATGCTTaGGTACTACTGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERVQDHA*VLLMIH
Trigger: GTGGATCATCAGTAGTACCCAAGCATGGTCCTGAAC...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGTTAGAGCCCCCTGAATaGAACTTCCACTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERLEPPE*NFHSGK
Trigger: CTTTCCAGAGTGGAAGTTCCATTCAGGGGGCTCTAA...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359142.7
CDS-3UTR CCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTTTAGAGCCCCCTGAATaGAACTTCCACTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPLEPPE*NFHSGK
Trigger: CTTTCCAGAGTGGAAGTTCCATTCAGGGGGCTCTAA...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000635033.1
CDS-3UTR TCA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTACCACTGTAAGCAACTaGGTTGTTTGCCATGTCGCC +
Preference number: 4 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCTTVSN*VVCHVA
Trigger: GGCGACATGGCAAACAACTCAGTTGCTTACAGTGGT...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCAGCCATGGTCTTTTCTaGACCCAGAAGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: CLGTTDDPQVTYAELLFISHGLF*TQKVSM
Trigger: CATTGACACCTTCTGGGTTCAGAAAAGACCATGGCT...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTTTATTACCAACGTaGCGAGGTAATCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERVLLPT*RGNPPS
Trigger: AGAGGGTGGATTACCTCGTCACGTTGGTAATAAAAC...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTCACGGTCCCTTGGTCTaGATACTTTTGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSHGPLV*ILLPHH
Trigger: ATGGTGAGGCAAAAGTATTCAGACCAAGGGACCGTG...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTTGGGCTTCCTGGGGATaGAGAGGTAGCAGACTTGTT +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLWASWG*RGSRLV
Trigger: AACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCA...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCTGGGCTTCCTGGGGATaGAGAGGTAGCAGACTTGTT +
Preference number: 4 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLWASWG*RGSRLV
Trigger: AACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCA...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTAGCCCTCATGCTGTGTaGAGGTCTCTAAAGATTAGA +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSSPHAV*RSLKIR
Trigger: TCTAATCTTTAGAGACCTTCACACAGCATGAGGGCT...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAACGCCTTAGAGCCCCCTaGATGGAACTTCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICERLRAP*MELPLW
Trigger: CCAGAGTGGAAGTTCCATTCAGGGGGCTCTAAGGCG...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000635033.1
CDS-3UTR GCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACACTGCATTTCCATGGCTaGACCATCCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITLHFHG*TILGFC
Trigger: GCAAAAGCCCAGGATGGTGCAGCCATGGAAATGCAG...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGAGACATCAACAGACCTaGTTTGCCAATCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERRHQQT*FANLNS
Trigger: GCTGTTCAGATTGGCAAAGCAGGTCTGTTGATGTCT...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTTTTACCCACAGCATCTaGACAGCCTTAAGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICFTHSI*TALSGE
Trigger: CTCACCGCTTAAGGCTGTGCAGATGCTGTGGGTAAA...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTACCCACAGCATCTaGACAGCCTTAAGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQFTHSI*TALSGE
Trigger: CTCACCGCTTAAGGCTGTGCAGATGCTGTGGGTAAA...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTAGTGGGTGGTTCCGTTaGCAGAGCCAGGGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFSGWFR*QSQGSE
Trigger: CTCGCTTCCCTGGCTCTGGCAACGGAACCACCCACT...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTAGTGGGTGGTTCCGTTaGCAGAGCCAGGGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFSGWFR*QSQGSE
Trigger: CTCGCTTCCCTGGCTCTGGCAACGGAACCACCCACT...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGCAGGGCTCTTTGTCTTaGCCAGTTTTACTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQQGSLS*PVLLLP
Trigger: AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTG...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTCTGGGCCCTAACACATaGCAGTTTCTAAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSLGPNT*QFLKGK
Trigger: TTTACCCTTTAGAAACTGGCATGTGTTAGGGCCCAG...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCATGGCTGCATTTCCATaGCTGCACCATCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPMAAFP*LHHPGL
Trigger: AAGCCCAGGATGGTGCAGCCATGGAAATGCAGCCAT...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTATGGCTGCATTTCCATaGCTGCACCATCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLMAAFP*LHHPGL
Trigger: AAGCCCAGGATGGTGCAGCCATGGAAATGCAGCCAT...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACTTCTTCACTCTTCAATaGCTGCATTTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYFFTLQ*LHFHGC
Trigger: GCAGCCATGGAAATGCAGCCATTGAAGAGTGAAGAA...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCGATCGTGACTGCAAGTaGAAGACCTTCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPDRDCK*KTFWHC
Trigger: GCAGTGCCAGAAGGTCTTCCACTTGCAGTCACGATC...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTTTTTAATTGCATCTaGCACCTCAGGTCTCACAGG +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPLFNCI*HLRSHR
Trigger: CCTGTGAGACCTGAGGTGCCAGATGCAATTAAAAAG...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGCTACAACCTGGCGTTaGTCTGAGACAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LWALQLIGSIFRVERVLQATTWR*SETVLS
Trigger: TGACAGCACTGTCTCAGACCAACGCCAGGTTGTAGC...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGGCAAGAGAGACTCAGTaGGTGGTTCCGTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQARETQ*VVPLPE
Trigger: CTCTGGCAACGGAACCACCCACTGAGTCTCTCTTGC...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCATTGTTGAAATAAGCTaGCCCCAGAGTAATGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVIVEIS*PQSNVP
Trigger: GGGAACATTACTCTGGGGCCAGCTTATTTCAACAAT...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTCATTGTTATTTTTGTTaGGAGAGGGTGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSHCYFC*ERVEDW
Trigger: CCAGTCCTCCACCCTCTCCCAACAAAAATAACAATG...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTTATCATGATGCTGGCTaGCGATGGAGGGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTYHDAG*RWRVAA
Trigger: GGCGGCAACCCTCCATCGCCAGCCAGCATCATGATA...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635033.1
3UTR CAA 72 bp ACTAAAGCTCTGCTAATACACTGTTCAGGACCATGCTaGGGTACTACTGATGATCCACAGGTCACTTACGCT +
Preference number: 4 (lower is better)
Translates to: TKALLIHCSGPC*GTTDDPQVTYA
Trigger: AGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAGAGCTTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCCTTACTCCAGTCATTaGAAGCTGTTACTAACACCA +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPPYSSH*KLLLTP
Trigger: TGGTGTTAGTAACAGCTTTCAATGACTGGAGTAAGG...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGCAGATGCACCCTTGCTaGATATTCGATAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERQMHPC*IFDNFH
Trigger: ATGGAAGTTATCGAATATTCAGCAAGGGTGCATCTG...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAGGTTCTCAAGCCTTCTaGTGCCATCGGTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITGSQAF*CHRFNH
Trigger: GTGATTGAACCGATGGCATCAGAAGGCTTGAGAACC...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACCTTATCAGTAGGAGATaGTCTTGCAAGTACTCGAAG +
Preference number: 4 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYLISRR*SCKYSK
Trigger: CTTCGAGTACTTGCAAGATCATCTCCTACTGATAAG...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGGCTAGTTGGAATTGTTaGAATAAGCTGGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQASWNC*NKLAPE
Trigger: CTCTGGGGCCAGCTTATTTCAACAATTCCAACTAGC...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGTCCTTTTGTGTTCCATaGCCAGCTTCTTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERSFCVP*PASLRN
Trigger: ATTCCTCAAAGAAGCTGGTCATGGAACACAAAAGGA...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTTCCTTTTGTGTTCCATaGCCAGCTTCTTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSSFCVP*PASLRN
Trigger: ATTCCTCAAAGAAGCTGGTCATGGAACACAAAAGGA...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACTCAATAAGGGGGATATaGGGCTCTGAATCTTCTATC +
Preference number: 4 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYSIRGI*GSESSI
Trigger: GATAGAAGATTCAGAGCCTCATATCCCCCTTATTGA...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAATGGGCTTCCTGGGGATaGAGAGGTAGCAGACTTGTT +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKWASWG*RGSRLV
Trigger: AACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCA...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTACAGGTCACTTACGCTaGGTTACTGTTTATCTGTCA +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPTGHLR*VTVYLS
Trigger: TGACAGATAAACAGTAACTCAGCGTAAGTGACCTGT...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGCTGCATTTCCATGGCTaGACCATCCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQLHFHG*TILGFC
Trigger: GCAAAAGCCCAGGATGGTGCAGCCATGGAAATGCAG...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGACTGCATTTCCATGGCTaGACCATCCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGLHFHG*TILGFC
Trigger: GCAAAAGCCCAGGATGGTGCAGCCATGGAAATGCAG...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTGTATATAAATTGGTGTaGACTCAGCAAGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSVYKLV*TQQAMV
Trigger: GACCATGGCTTGCTGAGTGCACACCAATTTATATAC...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTCAGGGCTCTTTGTCTTaGCCAGTTTTACTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLQGSLS*PVLLLP
Trigger: AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTG...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGCCTGCAGAGGATTACTaGAAAGATTTGATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERPAEDY*KDLMVR
Trigger: TCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGG...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTCCTGCAGAGGATTACTaGAAAGATTTGATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSPAEDY*KDLMVR
Trigger: TCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGG...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTTTCTCTATTCCCTATaGCTTGTGGGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: CLGTTDDPQVTYAELLFIFLYSL*LVGSPV
Trigger: AACTGGAGAGCCCACAAGGCATAGGGAATAGAGAAA...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCATGGCTGCATTTCCATaGCTGCACCATCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFMAAFP*LHHPGL
Trigger: AAGCCCAGGATGGTGCAGCCATGGAAATGCAGCCAT...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTGATCGTGACTGCAAGTaGAAGACCTTCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSDRDCK*KTFWHC
Trigger: GCAGTGCCAGAAGGTCTTCCACTTGCAGTCACGATC...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCGATCGTGACTGCAAGTaGAAGACCTTCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFDRDCK*KTFWHC
Trigger: GCAGTGCCAGAAGGTCTTCCACTTGCAGTCACGATC...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTGCTACAACCTGGCGTTaGTCTGAGACAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSATTWR*SETVLS
Trigger: TGACAGCACTGTCTCAGACCAACGCCAGGTTGTAGC...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTGCTACAACCTGGCGTTaGTCTGAGACAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSATTWR*SETVLS
Trigger: TGACAGCACTGTCTCAGACCAACGCCAGGTTGTAGC...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGCAAGAGAGACTCAGTaGGTGGTTCCGTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICARETQ*VVPLPE
Trigger: CTCTGGCAACGGAACCACCCACTGAGTCTCTCTTGC...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGCTAAAGAATCCAATTaGCTTAGAGGTGGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERAKESN*LRGGHS
Trigger: AGAATGCCCACCTCTAAGCCAATTGGATTCTTTAGC...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTGCTAAAGAATCCAATTaGCTTAGAGGTGGGCATTCT +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSAKESN*LRGGHS
Trigger: AGAATGCCCACCTCTAAGCCAATTGGATTCTTTAGC...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTGTATCTGGTGAAATCTaGGCCCTAACACATGCCAGT +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSVSGEI*ALTHAS
Trigger: ACTGGCATGTGTTAGGGCCCAGATTTCACCAGATAC...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAAGTATCTGGTGAAATCTaGGCCCTAACACATGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKVSGEI*ALTHAS
Trigger: ACTGGCATGTGTTAGGGCCCAGATTTCACCAGATAC...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCTCACGGTATCTCAGTTaGCTTACACGTGTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVSRYLS*LTRVKR
Trigger: TCTTTTTACACGTGTAAGCCAACTGAGATACCGTGA...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTAAGTATCTTGACCTTTaGCCCATGACTAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPKYLDL*PMTSFS
Trigger: GGAGAAACTAGTCATGGGCCAAAGGTCAAGATACTT...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCGAGCCTTCCATTACATaGGTACCTGATAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: CLGTTDDPQVTYAELLFIEPSIT*VPDRSK
Trigger: CTTACTTCTATCAGGTACTCATGTAATGGAAGGCTC...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGCCAGTGAGATCGTaGCTGCAAGTGGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKKPVRS*LQVEDL
Trigger: AAGGTCTTCCACTTGCAGTCACGATCTCACTGGCTT...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCTCGATAACTTCCATCTaGATTTTTCAGGACAGTACT +
Preference number: 4 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVSITSI*IFQDST
Trigger: AGTACTGTCCTGAAAAATTCAGATGGAAGTTATCGA...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCACGGTCCCTTGGTCTaGATACTTTTGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSHGPLV*ILLPHH
Trigger: ATGGTGAGGCAAAAGTATTCAGACCAAGGGACCGTG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAACACGGTCCCTTGGTCTaGATACTTTTGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKHGPLV*ILLPHH
Trigger: ATGGTGAGGCAAAAGTATTCAGACCAAGGGACCGTG...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTGTAATTCCAGCCCTCTaGCACTTTTTAATTGCATCT +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSVIPAL*HFLIAS
Trigger: AGATGCAATTAAAAAGTGTCAGAGGGCTGGAATTAC...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTAATTCCAGCCCTCTaGCACTTTTTAATTGCATCT +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERVIPAL*HFLIAS
Trigger: AGATGCAATTAAAAAGTGTCAGAGGGCTGGAATTAC...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTAACCTGGCGTTGGTCTaGGACAGTGCTGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLNLALV*DSAVNY
Trigger: ATAATTGACAGCACTGTCTCAGACCAACGCCAGGTT...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAAACCTGGCGTTGGTCTaGGACAGTGCTGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITNLALV*DSAVNY
Trigger: ATAATTGACAGCACTGTCTCAGACCAACGCCAGGTT...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGGGCATTTATTTCGTTaGAAAGTTGCATCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERGHLFR*KVASAQ
Trigger: TTGTGCTGATGCAACTTTTCAACGAAATAAATGCCC...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTTGGGCTTCCTGGGGATaGAGAGGTAGCAGACTTGTT +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFWASWG*RGSRLV
Trigger: AACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCA...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTAGCCCTCATGCTGTGTaGAGGTCTCTAAAGATTAGA +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICSPHAV*RSLKIR
Trigger: TCTAATCTTTAGAGACCTTCACACAGCATGAGGGCT...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATCACTCTTCAATGGCTaGATTTCCATGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITSLFNG*ISMAAP
Trigger: TGGTGCAGCCATGGAAATGCAGCCATTGAAGAGTGA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGAGACATCAACAGACCTaGTTTGCCAATCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQRHQQT*FANLNS
Trigger: GCTGTTCAGATTGGCAAAGCAGGTCTGTTGATGTCT...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTCTGAAGGAGGAGCATaGAAAGGAGCATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQSEGGA*KGAFLP
Trigger: TGGAAGAAATGCTCCTTTGCATGCTCCTCCTTCAGA...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTCACTGTTCAGGACCATaGTTGGGTACTACTGATGAT +
Preference number: 4 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCHCSGP*LGTTDD
Trigger: ATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTG...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCAGGGCTCTTTGTCTTaGCCAGTTTTACTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSQGSLS*PVLLLP
Trigger: AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGACAGGGCTCTTTGTCTTaGCCAGTTTTACTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGQGSLS*PVLLLP
Trigger: AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTG...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATGCCAACAGCCCTCATaGTGTGTGAAGGTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITCQQPS*CVKVSK
Trigger: TTTAGAGACCTTCACACAGCATGAGGGCTGTTGGCA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAATGCCAACAGCCCTCATaGTGTGTGAAGGTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LWALQLIGSIFRVERVLQCQQPS*CVKVSK
Trigger: TTTAGAGACCTTCACACAGCATGAGGGCTGTTGGCA...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTTGCATTATCCCCTTCTaGAGGCTGATAAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSCIIPF*RLIKRK
Trigger: CTTTCTTTTTATCAGCCTCCAGAAGGGGATAATGCA...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTATGGCTGCATTTCCATaGCTGCACCATCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICMAAFP*LHHPGL
Trigger: AAGCCCAGGATGGTGCAGCCATGGAAATGCAGCCAT...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTCTTCACTCTTCAATaGCTGCATTTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSFFTLQ*LHFHGC
Trigger: GCAGCCATGGAAATGCAGCCATTGAAGAGTGAAGAA...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAGATCGTGACTGCAAGTaGAAGACCTTCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEDRDCK*KTFWHC
Trigger: GCAGTGCCAGAAGGTCTTCCACTTGCAGTCACGATC...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTCTTTTTAATTGCATCTaGCACCTCAGGTCTCACAGG +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSLFNCI*HLRSHR
Trigger: CCTGTGAGACCTGAGGTGCCAGATGCAATTAAAAAG...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAGTTCAGGACCATGCTTaGGTACTACTGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITVQDHA*VLLMIH
Trigger: GTGGATCATCAGTAGTACCCAAGCATGGTCCTGAAC...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAATTCCCTATGCCTTGTaGGCTCTCCAGTTGATAGGG +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKIPYAL*ALQLIG
Trigger: CCCTATCAACTGGAGAGCCCACAAGGCATAGGGAAT...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTATTCCCTATGCCTTGTaGGCTCTCCAGTTGATAGGG +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSIPYAL*ALQLIG
Trigger: CCCTATCAACTGGAGAGCCCACAAGGCATAGGGAAT...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCACTGTAAGCAACTaGGTTGTTTGCCATGTCGCC +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKTTVSN*VVCHVA
Trigger: GGCGACATGGCAAACAACTCAGTTGCTTACAGTGGT...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAATTAAGATCGTTGCCTTaGATAAGTATGCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKLRSLP*ISMPSA
Trigger: AGCTGACGGCATACTTATTCAAGGCAACGATCTTAA...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGAGCCATGGTCTTTTCTaGACCCAGAAGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQSHGLF*TQKVSM
Trigger: CATTGACACCTTCTGGGTTCAGAAAAGACCATGGCT...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGCCAGTGAGATCGTaGCTGCAAGTGGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEKPVRS*LQVEDL
Trigger: AAGGTCTTCCACTTGCAGTCACGATCTCACTGGCTT...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGCACGGTCCCTTGGTCTaGATACTTTTGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKHGPLV*ILLPHH
Trigger: ATGGTGAGGCAAAAGTATTCAGACCAAGGGACCGTG...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTCTGCTGGAAAATCTCTaGATGCAAGACATATGGTTC +
Preference number: 4 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCLLENL*MQDIWF
Trigger: GAACCATATGTCTTGCATTCAGAGATTTTCCAGCAG...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCCGAGTGTATCCATTATaGGGTTTACCCACAGCATCT +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPRVYPL*GLPTAS
Trigger: AGATGCTGTGGGTAAACCTCATAATGGATACACTCG...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTAAAGTTCTGAACAACTaGAAGGTTTTCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPKVLNN*KVFHQT
Trigger: AGTTTGGTGGAAAACCTTTCAGTTGTTCAGAACTTT...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGGCTAGTTGGAATTGTTaGAATAAGCTGGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: AVTILKCIPIVVKENRLMASWNC*NKLAPE
Trigger: CTCTGGGGCCAGCTTATTTCAACAATTCCAACTAGC...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTGCTAGTTGGAATTGTTaGAATAAGCTGGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSASWNC*NKLAPE
Trigger: CTCTGGGGCCAGCTTATTTCAACAATTCCAACTAGC...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCAACTCCCTTTCAGCGTaGTCAATCTCTTCAACATCC +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPNSLSA*SISSTS
Trigger: GGATGTTGAAGAGATTGATCACGCTGAAAGGGAGTT...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCAACTCCCTTTCAGCGTaGTCAATCTCTTCAACATCC +
Preference number: 4 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLNSLSA*SISSTS
Trigger: GGATGTTGAAGAGATTGATCACGCTGAAAGGGAGTT...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAAACTCCCTTTCAGCGTaGTCAATCTCTTCAACATCC +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITNSLSA*SISSTS
Trigger: GGATGTTGAAGAGATTGATCACGCTGAAAGGGAGTT...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTTGTGTCATAAAGTTGTaGATCGAACTTCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSCVIKL*IELLDS
Trigger: GGAATCAAGAAGTTCGATTCACAACTTTATGACACA...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTAAGTGTGTCTTCTGTTaGAGTCCAAAGACAAGAATA +
Preference number: 4 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPKCVFC*SPKTRI
Trigger: TATTCTTGTCTTTGGACTTCAACAGAAGACACACTT...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACAAGTGTGTCTTCTGTTaGAGTCCAAAGACAAGAATA +
Preference number: 4 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYKCVFC*SPKTRI
Trigger: TATTCTTGTCTTTGGACTTCAACAGAAGACACACTT...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTGGATTGTGTATCTGGTaGAATCTGGGCCCTAACACA +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSGLCIW*NLGPNT
Trigger: TGTGTTAGGGCCCAGATTTCACCAGATACACAATCC...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGGGATTGTGTATCTGGTaGAATCTGGGCCCTAACACA +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQGLCIW*NLGPNT
Trigger: TGTGTTAGGGCCCAGATTTCACCAGATACACAATCC...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTTCTCCATATCAATCATaGGATATACACATCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICSPYQS*DIHISP
Trigger: GGGCGAGATGTGTATATCTCATGATTGATATGGAGA...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428670.8
CDS-3UTR GCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTCTGCATTTCCATGGCTaGACCATCCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFLHFHG*TILGFC
Trigger: GCAAAAGCCCAGGATGGTGCAGCCATGGAAATGCAG...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTTCAACAGACCTGCTTTaGCAATCTGAACAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLSTDLL*QSEQPV
Trigger: AACTGGCTGTTCAGATTGGCAAAGCAGGTCTGTTGA...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTGTATATAAATTGGTGTaGACTCAGCAAGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICVYKLV*TQQAMV
Trigger: GACCATGGCTTGCTGAGTGCACACCAATTTATATAC...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATGGTTCTGGTTCTCCTaGTGGAAAATCTCTGAATGC +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITWFWFS*WKISEC
Trigger: GCATTCAGAGATTTTCCAGCAGGAGAACCAGAACCA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTTCTGAAGGAGGAGCATaGAAAGGAGCATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLSEGGA*KGAFLP
Trigger: TGGAAGAAATGCTCCTTTGCATGCTCCTCCTTCAGA...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCCTGGGCCCTAACACATaGCAGTTTCTAAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLLGPNT*QFLKGK
Trigger: TTTACCCTTTAGAAACTGGCATGTGTTAGGGCCCAG...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTTTCTCTATTCCCTATaGCTTGTGGGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TDDPQVTYAELLFICQFIFLYSL*LVGSPV
Trigger: AACTGGAGAGCCCACAAGGCATAGGGAATAGAGAAA...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTTCTTCACTCTTCAATaGCTGCATTTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: TDDPQVTYAELLFICQFIFFTLQ*LHFHGC
Trigger: GCAGCCATGGAAATGCAGCCATTGAAGAGTGAAGAA...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCTAAACCACAAGATTTaGCCACGCCGCAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFLNHKI*PRRNSL
Trigger: AAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAG...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAACTAAACCACAAGATTTaGCCACGCCGCAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICELNHKI*PRRNSL
Trigger: AAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAG...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAACATTGTTATTTTTGTTaGGAGAGGGTGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LWALQLIGSIFRVERVLQHCYFC*ERVEDW
Trigger: CCAGTCCTCCACCCTCTCCCAACAAAAATAACAATG...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTAAGTATCTTGACCTTTaGCCCATGACTAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCKYLDL*PMTSFS
Trigger: GGAGAAACTAGTCATGGGCCAAAGGTCAAGATACTT...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTAAAAGAAAGGCCCAATaGTACTATGGCTGCAATTTC +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSKRKAQ*YYGCNF
Trigger: GAAATTGCAGCCATAGTATCATTGGGCCTTTCTTTT...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGAGCCTTCCATTACATaGGTACCTGATAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: LWALQLIGSIFRVERVLQEPSIT*VPDRSK
Trigger: CTTACTTCTATCAGGTACTCATGTAATGGAAGGCTC...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCCTGCTTTGCCAATCTaGACAGCCAGTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSPALPI*TASFVS
Trigger: ACTTACAAAACTGGCTGTTCAGATTGGCAAAGCAGG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCCCTGCTTTGCCAATCTaGACAGCCAGTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFPALPI*TASFVS
Trigger: ACTTACAAAACTGGCTGTTCAGATTGGCAAAGCAGG...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTAAGCCAGTGAGATCGTaGCTGCAAGTGGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFKPVRS*LQVEDL
Trigger: AAGGTCTTCCACTTGCAGTCACGATCTCACTGGCTT...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGGTTTTATTACCAACGTaGCGAGGTAATCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQVLLPT*RGNPPS
Trigger: AGAGGGTGGATTACCTCGTCACGTTGGTAATAAAAC...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTGTTTTATTACCAACGTaGCGAGGTAATCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSVLLPT*RGNPPS
Trigger: AGAGGGTGGATTACCTCGTCACGTTGGTAATAAAAC...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACGGTTCTCAAGCCTTCTaGTGCCATCGGTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYGSQAF*CHRFNH
Trigger: GTGATTGAACCGATGGCATCAGAAGGCTTGAGAACC...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAACCTGGCGTTGGTCTaGGACAGTGCTGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICENLALV*DSAVNY
Trigger: ATAATTGACAGCACTGTCTCAGACCAACGCCAGGTT...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTGGGCATTTATTTCGTTaGAAAGTTGCATCAGCACAA +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSGHLFR*KVASAQ
Trigger: TTGTGCTGATGCAACTTTTCAACGAAATAAATGCCC...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAGCTAGTTGGAATTGTTaGAATAAGCTGGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEASWNC*NKLAPE
Trigger: CTCTGGGGCCAGCTTATTTCAACAATTCCAACTAGC...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCTCCTTTTGTGTTCCATaGCCAGCTTCTTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLSFCVP*PASLRN
Trigger: ATTCCTCAAAGAAGCTGGTCATGGAACACAAAAGGA...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTAACTCCCTTTCAGCGTaGTCAATCTCTTCAACATCC +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSNSLSA*SISSTS
Trigger: GGATGTTGAAGAGATTGATCACGCTGAAAGGGAGTT...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATCAATAAGGGGGATATaGGGCTCTGAATCTTCTATC +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITSIRGI*GSESSI
Trigger: GATAGAAGATTCAGAGCCTCATATCCCCCTTATTGA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTAGCCCTCATGCTGTGTaGAGGTCTCTAAAGATTAGA +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSSPHAV*RSLKIR
Trigger: TCTAATCTTTAGAGACCTTCACACAGCATGAGGGCT...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTTCAAAGAGAACAGACTaGTGCACTGTATATGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICSKRTD*CTVYAE
Trigger: TTCTGCATATACAGTGCATCAGTCTGTTCTCTTTGA...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAATATTTGTTACATCATaGTGCTGGCTGGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKIFVTS*CWLAME
Trigger: CTCCATCGCCAGCCAGCATCATGATGTAACAAATAT...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359142.7
CDS-3UTR GCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCTACAGACAAGAGGATTaGAGCTCCTTCAATCCAACC +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFYRQED*SSFNPT
Trigger: GGTTGGATTGAAGGAGCTGCAATCCTCTTGTCTGTA...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAATACAGACAAGAGGATTaGAGCTCCTTCAATCCAACC +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKYRQED*SSFNPT
Trigger: GGTTGGATTGAAGGAGCTGCAATCCTCTTGTCTGTA...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTTCAATTCGGCTCTaGAAACCTCTAAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: CLGTTDDPQVTYAELLFICSIRL*KPLNCF
Trigger: AAAACAGTTTAGAGGTTTGCAGAGCCGAATTGAACA...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGTCACTCTTCAATGGCTaGATTTCCATGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKSLFNG*ISMAAP
Trigger: TGGTGCAGCCATGGAAATGCAGCCATTGAAGAGTGA...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAGACATCAACAGACCTaGTTTGCCAATCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKRHQQT*FANLNS
Trigger: GCTGTTCAGATTGGCAAAGCAGGTCTGTTGATGTCT...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAGTATATAAATTGGTGTaGACTCAGCAAGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITVYKLV*TQQAMV
Trigger: GACCATGGCTTGCTGAGTGCACACCAATTTATATAC...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGAATTATCTCAGATaGACCCTTGCTGAATATTCG +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICQNYLR*TLAEYS
Trigger: CGAATATTCAGCAAGGGTGCATCTGAGATAATTCTG...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTCCAGCAATACCCATTaGAAATCCAACATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQSSNTH*KSNICF
Trigger: AAAGCAGATGTTGGATTTGCAATGGGTATTGCTGGA...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTCGTCCCCACATAACTaGTTTAACAATGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: CLGTTDDPQVTYAELLFISSPHN*FNNACK
Trigger: TTTACAAGCATTGTTAAAGCAGTTATGTGGGGACGA...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACTTTACCCACAGCATCTaGACAGCCTTAAGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYFTHSI*TALSGE
Trigger: CTCACCGCTTAAGGCTGTGCAGATGCTGTGGGTAAA...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTTTTACCCACAGCATCTaGACAGCCTTAAGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFFTHSI*TALSGE
Trigger: CTCACCGCTTAAGGCTGTGCAGATGCTGTGGGTAAA...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTCTGAAGGAGGAGCATaGAAAGGAGCATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSSEGGA*KGAFLP
Trigger: TGGAAGAAATGCTCCTTTGCATGCTCCTCCTTCAGA...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAATCTGAAGGAGGAGCATaGAAAGGAGCATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKSEGGA*KGAFLP
Trigger: TGGAAGAAATGCTCCTTTGCATGCTCCTCCTTCAGA...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCCACTGTTCAGGACCATaGTTGGGTACTACTGATGAT +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFHCSGP*LGTTDD
Trigger: ATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTG...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTCTGGGCCCTAACACATaGCAGTTTCTAAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSLGPNT*QFLKGK
Trigger: TTTACCCTTTAGAAACTGGCATGTGTTAGGGCCCAG...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTTTTCTCTATTCCCTATaGCTTGTGGGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSFLYSL*LVGSPV
Trigger: AACTGGAGAGCCCACAAGGCATAGGGAATAGAGAAA...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGATAGGACAAAATATTTaGTGGAATAGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PYALWALQLIGSIFRVERIGQNI*WNSFWF
Trigger: GAACCAGAAGCTATTCCACCAAATATTTTGTCCTAT...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTATCATCACGGTCCCTTaGTCTGAATACTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSIITVP*SEYFCL
Trigger: GAGGCAAAAGTATTCAGACCAAGGGACCGTGATGAT...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGAATCATCACGGTCCCTTaGTCTGAATACTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGIITVP*SEYFCL
Trigger: GAGGCAAAAGTATTCAGACCAAGGGACCGTGATGAT...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCTTCTGGTTCTCCTGCTaGAAAATCTCTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPFWFSC*KISECK
Trigger: CTTGCATTCAGAGATTTTCCAGCAGGAGAACCAGAA...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTTTCTGGTTCTCCTGCTaGAAAATCTCTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLFWFSC*KISECK
Trigger: CTTGCATTCAGAGATTTTCCAGCAGGAGAACCAGAA...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTCTTTTTAATTGCATCTaGCACCTCAGGTCTCACAGG +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSLFNCI*HLRSHR
Trigger: CCTGTGAGACCTGAGGTGCCAGATGCAATTAAAAAG...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGCTTTTTAATTGCATCTaGCACCTCAGGTCTCACAGG +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQLFNCI*HLRSHR
Trigger: CCTGTGAGACCTGAGGTGCCAGATGCAATTAAAAAG...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTCTAAACCACAAGATTTaGCCACGCCGCAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFLNHKI*PRRNSL
Trigger: AAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAG...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCAAAGCACCCTCAGTCTaGCAGAAAGCTTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPKAPSV*QKALLF
Trigger: AAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTT...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAGTTCAGGACCATGCTTaGGTACTACTGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEVQDHA*VLLMIH
Trigger: GTGGATCATCAGTAGTACCCAAGCATGGTCCTGAAC...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCCATAAGACCCGTTTATaGATTAGAGTTGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: CLGTTDDPQVTYAELLFIHKTRL*IRVGVE
Trigger: TTCTACACCAACTCTAATCCATAAACGGGTCTTATG...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCAAAAGAAAGGCCCAATaGTACTATGGCTGCAATTTC +
Preference number: 4 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLKRKAQ*YYGCNF
Trigger: GAAATTGCAGCCATAGTATCATTGGGCCTTTCTTTT...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTAAAAGAAAGGCCCAATaGTACTATGGCTGCAATTTC +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLKRKAQ*YYGCNF
Trigger: GAAATTGCAGCCATAGTATCATTGGGCCTTTCTTTT...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTCACCATATTTCACTTaGGCAATATCTCCAACAGTA +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQSPYFT*AISPTV
Trigger: TACTGTTGGAGATATTGCTCAAGTGAAATATGGTGA...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGGAGCCTTCCATTACATaGGTACCTGATAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: AVTILKCIPIVVKENRLMEPSIT*VPDRSK
Trigger: CTTACTTCTATCAGGTACTCATGTAATGGAAGGCTC...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGTTTTATTACCAACGTaGCGAGGTAATCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICVLLPT*RGNPPS
Trigger: AGAGGGTGGATTACCTCGTCACGTTGGTAATAAAAC...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGACAGATGCACCCTTGCTaGATATTCGATAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGQMHPC*IFDNFH
Trigger: ATGGAAGTTATCGAATATTCAGCAAGGGTGCATCTG...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGCTGCTGGAAAATCTCTaGATGCAAGACATATGGTTC +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQLLENL*MQDIWF
Trigger: GAACCATATGTCTTGCATTCAGAGATTTTCCAGCAG...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGTAATTCCAGCCCTCTaGCACTTTTTAATTGCATCT +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLVIPAL*HFLIAS
Trigger: AGATGCAATTAAAAAGTGTCAGAGGGCTGGAATTAC...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCTTATCAGTAGGAGATaGTCTTGCAAGTACTCGAAG +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSLISRR*SCKYSK
Trigger: CTTCGAGTACTTGCAAGATCATCTCCTACTGATAAG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCCTTATCAGTAGGAGATaGTCTTGCAAGTACTCGAAG +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFLISRR*SCKYSK
Trigger: CTTCGAGTACTTGCAAGATCATCTCCTACTGATAAG...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAACGAGTGTATCCATTATaGGGTTTACCCACAGCATCT +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICERVYPL*GLPTAS
Trigger: AGATGCTGTGGGTAAACCTCATAATGGATACACTCG...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTAATAGTATAATGTTCTaGAGGAGGAGCATGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLNSIMF*RRSMQR
Trigger: CCTTTGCATGCTCCTCCTTCAGAACATTATACTATT...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGAAAGTTCTGAACAACTaGAAGGTTTTCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQKVLNN*KVFHQT
Trigger: AGTTTGGTGGAAAACCTTTCAGTTGTTCAGAACTTT...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTGCTAGTTGGAATTGTTaGAATAAGCTGGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFASWNC*NKLAPE
Trigger: CTCTGGGGCCAGCTTATTTCAACAATTCCAACTAGC...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAACTCCCTTTCAGCGTaGTCAATCTCTTCAACATCC +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICENSLSA*SISSTS
Trigger: GGATGTTGAAGAGATTGATCACGCTGAAAGGGAGTT...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTGTGTCATAAAGTTGTaGATCGAACTTCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSCVIKL*IELLDS
Trigger: GGAATCAAGAAGTTCGATTCACAACTTTATGACACA...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTGTGTCATAAAGTTGTaGATCGAACTTCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQCVIKL*IELLDS
Trigger: GGAATCAAGAAGTTCGATTCACAACTTTATGACACA...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTATTTCTATTGTAAGGTaGATTCCACTGTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICISIVR*IPLSTA
Trigger: TGCTGTTGACAGTGGAATTCACCTTACAATAGAAAT...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTACAGGTCACTTACGCTaGGTTACTGTTTATCTGTCA +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSTGHLR*VTVYLS
Trigger: TGACAGATAAACAGTAACTCAGCGTAAGTGACCTGT...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGACAGGTCACTTACGCTaGGTTACTGTTTATCTGTCA +
Preference number: 4 (lower is better)
Translates to: AVTILKCIPIVVKENRLMTGHLR*VTVYLS
Trigger: TGACAGATAAACAGTAACTCAGCGTAAGTGACCTGT...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTGGGCTGTTACCATCTTaGAATGTATTCCAATTGTGG +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSGLLPS*NVFQLW
Trigger: CCACAATTGGAATACATTTCAAGATGGTAACAGCCC...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAAGATGGTAAGCATCATTaGAAGAAATCAACACCATCA +
Preference number: 4 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKDGKHH*KKSTPS
Trigger: TGATGGTGTTGATTTCTTTCAATGATGCTTACCATC...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTGTTCAATTCGGCTCTaGAAACCTCTAAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSCSIRL*KPLNCF
Trigger: AAAACAGTTTAGAGGTTTGCAGAGCCGAATTGAACA...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGTCAACAGACCTGCTTTaGCAATCTGAACAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKSTDLL*QSEQPV
Trigger: AACTGGCTGTTCAGATTGGCAAAGCAGGTCTGTTGA...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTAGACATCAACAGACCTaGTTTGCCAATCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFRHQQT*FANLNS
Trigger: GCTGTTCAGATTGGCAAAGCAGGTCTGTTGATGTCT...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCCAGAATTATCTCAGATaGACCCTTGCTGAATATTCG +
Preference number: 4 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLQNYLR*TLAEYS
Trigger: CGAATATTCAGCAAGGGTGCATCTGAGATAATTCTG...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTTGGTTCTGGTTCTCCTaGTGGAAAATCTCTGAATGC +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICWFWFS*WKISEC
Trigger: GCATTCAGAGATTTTCCAGCAGGAGAACCAGAACCA...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAATGGTTCTGGTTCTCCTaGTGGAAAATCTCTGAATGC +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEWFWFS*WKISEC
Trigger: GCATTCAGAGATTTTCCAGCAGGAGAACCAGAACCA...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTGTCTATCCTCTCTTaGTCAATCTCTCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSLSILS*SISPFS
Trigger: TGAAAAAGGAGAGATTGAGCAAGAGAGGATAGACAA...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTCCTTTAACCAGTGTATaGTTATCAGTAGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSPLTSV*LSVGDD
Trigger: ATCATCTCCTACTGATAAGCATACACTGGTTAAAGG...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATCCAGCAATACCCATTaGAAATCCAACATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITSSNTH*KSNICF
Trigger: AAAGCAGATGTTGGATTTGCAATGGGTATTGCTGGA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTTCTGAAGGAGGAGCATaGAAAGGAGCATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTSEGGA*KGAFLP
Trigger: TGGAAGAAATGCTCCTTTGCATGCTCCTCCTTCAGA...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCACTGTTCAGGACCATaGTTGGGTACTACTGATGAT +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFHCSGP*LGTTDD
Trigger: ATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTG...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTCACTGTTCAGGACCATaGTTGGGTACTACTGATGAT +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICHCSGP*LGTTDD
Trigger: ATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTG...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTTGCCAACAGCCCTCATaGTGTGTGAAGGTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFCQQPS*CVKVSK
Trigger: TTTAGAGACCTTCACACAGCATGAGGGCTGTTGGCA...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAACCTGCAGAGGATTACTaGAAAGATTTGATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKPAEDY*KDLMVR
Trigger: TCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGG...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTGTGTTTCTAAGACCTaGAGAGGATTACTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TDDPQVTYAELLFICQFICVSKT*RGLLQR
Trigger: TCTTTGCAGTAATCCTCTGCAGGTCTTAGAAACACA...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATGTGTTTCTAAGACCTaGAGAGGATTACTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITCVSKT*RGLLQR
Trigger: TCTTTGCAGTAATCCTCTGCAGGTCTTAGAAACACA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTGGTGTAGAAAGCCATTaGCTTGAGTTGAAAAATGAA +
Preference number: 4 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCGVESH*LELKNE
Trigger: TTCATTTTTCAACTCAAGGCAATGGCTTTCTACACC...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTGCATTATCCCCTTCTaGAGGCTGATAAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: TDDPQVTYAELLFICQFICIIPF*RLIKRK
Trigger: CTTTCTTTTTATCAGCCTCCAGAAGGGGATAATGCA...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAAAGTATGCCGTCAGCTaGAAGAAGATCACCATATTT +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITKYAVS*KKITIF
Trigger: AAATATGGTGATCTTCTTCCAGCTGACGGCATACTT...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAATTCTTCACTCTTCAATaGCTGCATTTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEFFTLQ*LHFHGC
Trigger: GCAGCCATGGAAATGCAGCCATTGAAGAGTGAAGAA...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTGTATTGTATATAAATTaGTGTGCACTCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSVLYIN*CALSKP
Trigger: TGGCTTGCTGAGTGCACACCAATTTATATACAATAC...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTGTATTGTATATAAATTaGTGTGCACTCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICVLYIN*CALSKP
Trigger: TGGCTTGCTGAGTGCACACCAATTTATATACAATAC...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAATTCTGGTTCTCCTGCTaGAAAATCTCTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKFWFSC*KISECK
Trigger: CTTGCATTCAGAGATTTTCCAGCAGGAGAACCAGAA...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTAAGTACTCGAAGTTTTaGCCAAATCTTGTCTATCCT +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICKYSKF*PNLVYP
Trigger: AGGATAGACAAGATTTGGCCAAAACTTCGAGTACTT...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTATTGTTGAAATAAGCTaGCCCCAGAGTAATGTTCCC +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSIVEIS*PQSNVP
Trigger: GGGAACATTACTCTGGGGCCAGCTTATTTCAACAAT...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGATTGTTGAAATAAGCTaGCCCCAGAGTAATGTTCCC +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQIVEIS*PQSNVP
Trigger: GGGAACATTACTCTGGGGCCAGCTTATTTCAACAAT...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCACTCGAATCTGTGTTTaGATTCTGTTCAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLTRICV*ILFRPL
Trigger: TAGAGGTCTGAACAGAATCCAAACACAGATTCGAGT...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261173.6
ENST00000428670.8
CDS-3UTR CCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGCATTGTTATTTTTGTTaGGAGAGGGTGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKHCYFC*ERVEDW
Trigger: CCAGTCCTCCACCCTCTCCCAACAAAAATAACAATG...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCATTGTTATTTTTGTTaGGAGAGGGTGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFHCYFC*ERVEDW
Trigger: CCAGTCCTCCACCCTCTCCCAACAAAAATAACAATG...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTGTTCAGGACCATGCTTaGGTACTACTGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFVQDHA*VLLMIH
Trigger: GTGGATCATCAGTAGTACCCAAGCATGGTCCTGAAC...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCGCTAAAGAATCCAATTaGCTTAGAGGTGGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFAKESN*LRGGHS
Trigger: AGAATGCCCACCTCTAAGCCAATTGGATTCTTTAGC...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTGTATCTGGTGAAATCTaGGCCCTAACACATGCCAGT +
Preference number: 4 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFVSGEI*ALTHAS
Trigger: ACTGGCATGTGTTAGGGCCCAGATTTCACCAGATAC...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTCATAAGACCCGTTTATaGATTAGAGTTGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCHKTRL*IRVGVE
Trigger: TTCTACACCAACTCTAATCCATAAACGGGTCTTATG...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGATGGAACTTCCACTCTaGAAAGCATTCACTACATCC +
Preference number: 4 (lower is better)
Translates to: AVTILKCIPIVVKENRLMMELPL*KAFTTS
Trigger: GGATGTAGTGAATGCTTTCCAGAGTGGAAGTTCCAT...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359142.7
3UTR CAA 72 bp GGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTaGAAATGTATTCCAATTGTGGTCAAAGAGAACAGA +
Preference number: 4 (lower is better)
Translates to: GIKAVLHGAVTI*KCIPIVVKENR
Trigger: TCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTCCTTACTCCAGTCATTaGAAGCTGTTACTAACACCA +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICPYSSH*KLLLTP
Trigger: TGGTGTTAGTAACAGCTTTCAATGACTGGAGTAAGG...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAACCTTACTCCAGTCATTaGAAGCTGTTACTAACACCA +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEPYSSH*KLLLTP
Trigger: TGGTGTTAGTAACAGCTTTCAATGACTGGAGTAAGG...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCACCATATTTCACTTaGGCAATATCTCCAACAGTA +
Preference number: 4 (lower is better)
Translates to: TDDPQVTYAELLFICQFISPYFT*AISPTV
Trigger: TACTGTTGGAGATATTGCTCAAGTGAAATATGGTGA...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAATTAAGATCGTTGCCTTaGATAAGTATGCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICELRSLP*ISMPSA
Trigger: AGCTGACGGCATACTTATTCAAGGCAACGATCTTAA...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTCCTGCTTTGCCAATCTaGACAGCCAGTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFPALPI*TASFVS
Trigger: ACTTACAAAACTGGCTGTTCAGATTGGCAAAGCAGG...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTTCGATAACTTCCATCTaGATTTTTCAGGACAGTACT +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLSITSI*IFQDST
Trigger: AGTACTGTCCTGAAAAATTCAGATGGAAGTTATCGA...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTCAGATGCACCCTTGCTaGATATTCGATAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICQMHPC*IFDNFH
Trigger: ATGGAAGTTATCGAATATTCAGCAAGGGTGCATCTG...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCTGCTGGAAAATCTCTaGATGCAAGACATATGGTTC +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFLLENL*MQDIWF
Trigger: GAACCATATGTCTTGCATTCAGAGATTTTCCAGCAG...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCGTAATTCCAGCCCTCTaGCACTTTTTAATTGCATCT +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFVIPAL*HFLIAS
Trigger: AGATGCAATTAAAAAGTGTCAGAGGGCTGGAATTAC...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTACAGTAAGTTGGAACTaGAGGAATTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSTVSWN*RNFEML
Trigger: CAGCATCTCAAAATTCCTTCAGTTCCAACTTACTGT...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGACAGTAAGTTGGAACTaGAGGAATTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: AVTILKCIPIVVKENRLMTVSWN*RNFEML
Trigger: CAGCATCTCAAAATTCCTTCAGTTCCAACTTACTGT...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTCGAGTGTATCCATTATaGGGTTTACCCACAGCATCT +
Preference number: 4 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFRVYPL*GLPTAS
Trigger: AGATGCTGTGGGTAAACCTCATAATGGATACACTCG...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGAATAGTATAATGTTCTaGAGGAGGAGCATGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQNSIMF*RRSMQR
Trigger: CCTTTGCATGCTCCTCCTTCAGAACATTATACTATT...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTGGGCATTTATTTCGTTaGAAAGTTGCATCAGCACAA +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSGHLFR*KVASAQ
Trigger: TTGTGCTGATGCAACTTTTCAACGAAATAAATGCCC...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTTCCTTTTGTGTTCCATaGCCAGCTTCTTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFSFCVP*PASLRN
Trigger: ATTCCTCAAAGAAGCTGGTCATGGAACACAAAAGGA...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTTCAATAAGGGGGATATaGGGCTCTGAATCTTCTATC +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICSIRGI*GSESSI
Trigger: GATAGAAGATTCAGAGCCTCATATCCCCCTTATTGA...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCATTTCTATTGTAAGGTaGATTCCACTGTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPISIVR*IPLSTA
Trigger: TGCTGTTGACAGTGGAATTCACCTTACAATAGAAAT...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCGTCCATCACAATATGTaGAAAGACCCAGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPVHHNM*KDPVSI
Trigger: AATTGAAACTGGGTCTTTTCACATATTGTGATGGAC...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGTCCATCACAATATGTaGAAAGACCCAGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLVHHNM*KDPVSI
Trigger: AATTGAAACTGGGTCTTTTCACATATTGTGATGGAC...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAAAGTGTGTCTTCTGTTaGAGTCCAAAGACAAGAATA +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITKCVFC*SPKTRI
Trigger: TATTCTTGTCTTTGGACTTCAACAGAAGACACACTT...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCAAGTGTGTCTTCTGTTaGAGTCCAAAGACAAGAATA +
Preference number: 4 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLKCVFC*SPKTRI
Trigger: TATTCTTGTCTTTGGACTTCAACAGAAGACACACTT...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTACAGGTCACTTACGCTaGGTTACTGTTTATCTGTCA +
Preference number: 4 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTTGHLR*VTVYLS
Trigger: TGACAGATAAACAGTAACTCAGCGTAAGTGACCTGT...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTCAAAGAGAACAGACTaGTGCACTGTATATGCAGAA +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSSKRTD*CTVYAE
Trigger: TTCTGCATATACAGTGCATCAGTCTGTTCTCTTTGA...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGGGGCTGTTACCATCTTaGAATGTATTCCAATTGTGG +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKGLLPS*NVFQLW
Trigger: CCACAATTGGAATACATTTCAAGATGGTAACAGCCC...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTGAGCCTTCCATTACATaGGTACCTATAACCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSEPSIT*VPITKN
Trigger: GTTTTTGGTTATAGGTACTCATGTAATGGAAGGCTC...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393164.6
CDS-3UTR GCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACTCAACAGACCTGCTTTaGCAATCTGAACAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYSTDLL*QSEQPV
Trigger: AACTGGCTGTTCAGATTGGCAAAGCAGGTCTGTTGA...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTTCAACAGACCTGCTTTaGCAATCTGAACAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFSTDLL*QSEQPV
Trigger: AACTGGCTGTTCAGATTGGCAAAGCAGGTCTGTTGA...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCAGAATTATCTCAGATaGACCCTTGCTGAATATTCG +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSQNYLR*TLAEYS
Trigger: CGAATATTCAGCAAGGGTGCATCTGAGATAATTCTG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTGGAAAATCTCTGAATaGAAGACATATGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQWKISE*KTYGSQ
Trigger: TTGAGAACCATATGTCTTGCATTCAGAGATTTTCCA...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTCCAGCAATACCCATTaGAAATCCAACATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSSSNTH*KSNICF
Trigger: AAAGCAGATGTTGGATTTGCAATGGGTATTGCTGGA...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTGGACTAATTTTTCTCTaGATCAGTTATAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LGTTDDPQVTYAELLFICGLIFL*ISYKEA
Trigger: AGCTTCCTTATAACTGATGCAGAGAAAAATTAGTCC...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTATTTTCCCAAGATCATaGAGCACATTAATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCIFPRS*STLMAK
Trigger: TTTTGCCATTAATGTGCTGCATGATCTTGGGAAAAT...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGGTGTAGAAAGCCATTaGCTTGAGTTGAAAAATGAA +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLGVESH*LELKNE
Trigger: TTCATTTTTCAACTCAAGGCAATGGCTTTCTACACC...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCGTATTGTATATAAATTaGTGTGCACTCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPVLYIN*CALSKP
Trigger: TGGCTTGCTGAGTGCACACCAATTTATATACAATAC...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTATCATCACGGTCCCTTaGTCTGAATACTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFIITVP*SEYFCL
Trigger: GAGGCAAAAGTATTCAGACCAAGGGACCGTGATGAT...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTATTGTTGAAATAAGCTaGCCCCAGAGTAATGTTCCC +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFIVEIS*PQSNVP
Trigger: GGGAACATTACTCTGGGGCCAGCTTATTTCAACAAT...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGATTGTTGAAATAAGCTaGCCCCAGAGTAATGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKIVEIS*PQSNVP
Trigger: GGGAACATTACTCTGGGGCCAGCTTATTTCAACAAT...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGACTCGAATCTGTGTTTaGATTCTGTTCAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQTRICV*ILFRPL
Trigger: TAGAGGTCTGAACAGAATCCAAACACAGATTCGAGT...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTCATTGTTATTTTTGTTaGGAGAGGGTGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFHCYFC*ERVEDW
Trigger: CCAGTCCTCCACCCTCTCCCAACAAAAATAACAATG...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAAGCACCCTCAGTCTaGCAGAAAGCTTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEKAPSV*QKALLF
Trigger: AAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTT...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CCA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAAAAATGTTTCTTTGCTTaGTCAGCACTCTCAGTTATA +
Preference number: 4 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKKCFFA*SALSVI
Trigger: TATAACTGAGAGTGCTGACCAAGCAAAGAAACATTT...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCCATAAGACCCGTTTATaGATTAGAGTTGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPHKTRL*IRVGVE
Trigger: TTCTACACCAACTCTAATCCATAAACGGGTCTTATG...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCTCACGGTATCTCAGTTaGCTTACACGTGTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFSRYLS*LTRVKR
Trigger: TCTTTTTACACGTGTAAGCCAACTGAGATACCGTGA...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTCACGGTATCTCAGTTaGCTTACACGTGTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSSRYLS*LTRVKR
Trigger: TCTTTTTACACGTGTAAGCCAACTGAGATACCGTGA...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTTTAAGATCGTTGCCTTaGATAAGTATGCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFLRSLP*ISMPSA
Trigger: AGCTGACGGCATACTTATTCAAGGCAACGATCTTAA...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAATCGATAACTTCCATCTaGATTTTTCAGGACAGTACT +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKSITSI*IFQDST
Trigger: AGTACTGTCCTGAAAAATTCAGATGGAAGTTATCGA...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACCTGCTGGAAAATCTCTaGATGCAAGACATATGGTTC +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYLLENL*MQDIWF
Trigger: GAACCATATGTCTTGCATTCAGAGATTTTCCAGCAG...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTCTTATCAGTAGGAGATaGTCTTGCAAGTACTCGAAG +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFLISRR*SCKYSK
Trigger: CTTCGAGTACTTGCAAGATCATCTCCTACTGATAAG...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTACAGTAAGTTGGAACTaGAGGAATTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTTVSWN*RNFEML
Trigger: CAGCATCTCAAAATTCCTTCAGTTCCAACTTACTGT...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTAATAGTATAATGTTCTaGAGGAGGAGCATGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICNSIMF*RRSMQR
Trigger: CCTTTGCATGCTCCTCCTTCAGAACATTATACTATT...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGAAAGTTCTGAACAACTaGAAGGTTTTCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQKVLNN*KVFHQT
Trigger: AGTTTGGTGGAAAACCTTTCAGTTGTTCAGAACTTT...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGATTTCTATTGTAAGGTaGATTCCACTGTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQISIVR*IPLSTA
Trigger: TGCTGTTGACAGTGGAATTCACCTTACAATAGAAAT...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCATTTCTATTGTAAGGTaGATTCCACTGTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFISIVR*IPLSTA
Trigger: TGCTGTTGACAGTGGAATTCACCTTACAATAGAAAT...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCGTCCATCACAATATGTaGAAAGACCCAGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFVHHNM*KDPVSI
Trigger: AATTGAAACTGGGTCTTTTCACATATTGTGATGGAC...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAGTCCATCACAATATGTaGAAAGACCCAGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKVHHNM*KDPVSI
Trigger: AATTGAAACTGGGTCTTTTCACATATTGTGATGGAC...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTGGGCTGTTACCATCTTaGAATGTATTCCAATTGTGG +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFGLLPS*NVFQLW
Trigger: CCACAATTGGAATACATTTCAAGATGGTAACAGCCC...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTGATGGTAAGCATCATTaGAAGAAATCAACACCATCA +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSDGKHH*KKSTPS
Trigger: TGATGGTGTTGATTTCTTTCAATGATGCTTACCATC...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCTCACAAGCATCCAGATaGCTTACTAAGTTATTATCT +
Preference number: 4 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLSQASR*LTKLLS
Trigger: AGATAATAACTTAGTAAGGCATCTGGATGCTTGTGA...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAGAATTATCTCAGATaGACCCTTGCTGAATATTCG +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFQNYLR*TLAEYS
Trigger: CGAATATTCAGCAAGGGTGCATCTGAGATAATTCTG...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATGGAAAATCTCTGAATaGAAGACATATGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITWKISE*KTYGSQ
Trigger: TTGAGAACCATATGTCTTGCATTCAGAGATTTTCCA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTGTCTATCCTCTCTTaGTCAATCTCTCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSLSILS*SISPFS
Trigger: TGAAAAAGGAGAGATTGAGCAAGAGAGGATAGACAA...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAATTGTCTATCCTCTCTTaGTCAATCTCTCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQLAYTCKLSILS*SISPFS
Trigger: TGAAAAAGGAGAGATTGAGCAAGAGAGGATAGACAA...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTGGTTTTCCACCAAACTaGACAATTATTATCTGTACC +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSGFPPN*TIIICT
Trigger: GGTACAGATAATAATTGTGCAGTTTGGTGGAAAACC...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGGACTAATTTTTCTCTaGATCAGTTATAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLGLIFL*ISYKEA
Trigger: AGCTTCCTTATAACTGATGCAGAGAAAAATTAGTCC...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTTGTGTTTCTAAGACCTaGAGAGGATTACTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTCVSKT*RGLLQR
Trigger: TCTTTGCAGTAATCCTCTGCAGGTCTTAGAAACACA...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTATTTTCCCAAGATCATaGAGCACATTAATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: TDDPQVTYAELLFICQFIIFPRS*STLMAK
Trigger: TTTTGCCATTAATGTGCTGCATGATCTTGGGAAAAT...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGAGGTGTAGAAAGCCATTaGCTTGAGTTGAAAAATGAA +
Preference number: 4 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGGVESH*LELKNE
Trigger: TTCATTTTTCAACTCAAGGCAATGGCTTTCTACACC...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTTGCATTATCCCCTTCTaGAGGCTGATAAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTCIIPF*RLIKRK
Trigger: CTTTCTTTTTATCAGCCTCCAGAAGGGGATAATGCA...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGTGGTGGAATAGCTTCTaGTTCAGGAACCTTTTTATA +
Preference number: 4 (lower is better)
Translates to: AVTILKCIPIVVKENRLMWWNSF*FRNLFI
Trigger: TATAAAAAGGTTCCTGAACCAGAAGCTATTCCACCA...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTGGTGGAATAGCTTCTaGTTCAGGAACCTTTTTATA +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSWWNSF*FRNLFI
Trigger: TATAAAAAGGTTCCTGAACCAGAAGCTATTCCACCA...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTTTCTGGTTCTCCTGCTaGAAAATCTCTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFFWFSC*KISECK
Trigger: CTTGCATTCAGAGATTTTCCAGCAGGAGAACCAGAA...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAAGTACTCGAAGTTTTaGCCAAATCTTGTCTATCCT +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFKYSKF*PNLVYP
Trigger: AGGATAGACAAGATTTGGCCAAAACTTCGAGTACTT...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTAAGTACTCGAAGTTTTaGCCAAATCTTGTCTATCCT +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSKYSKF*PNLVYP
Trigger: AGGATAGACAAGATTTGGCCAAAACTTCGAGTACTT...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTAAGTACTCGAAGTTTTaGCCAAATCTTGTCTATCCT +
Preference number: 4 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSKYSKF*PNLVYP
Trigger: AGGATAGACAAGATTTGGCCAAAACTTCGAGTACTT...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAACTCGAATCTGTGTTTaGATTCTGTTCAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICETRICV*ILFRPL
Trigger: TAGAGGTCTGAACAGAATCCAAACACAGATTCGAGT...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTAAATGTTTCTTTGCTTaGTCAGCACTCTCAGTTATA +
Preference number: 4 (lower is better)
Translates to: TDDPQVTYAELLFICQFIKCFFA*SALSVI
Trigger: TATAACTGAGAGTGCTGACCAAGCAAAGAAACATTT...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTATGGAACTTCCACTCTaGAAAGCATTCACTACATCC +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFMELPL*KAFTTS
Trigger: GGATGTAGTGAATGCTTTCCAGAGTGGAAGTTCCAT...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000635033.1
3UTR CAA 72 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTaGTCCATCACAATATGTGAAAAGACCCAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTS*SITICEKTQFQ
Trigger: TTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTTCACCATATTTCACTTaGGCAATATCTCCAACAGTA +
Preference number: 4 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTSPYFT*AISPTV
Trigger: TACTGTTGGAGATATTGCTCAAGTGAAATATGGTGA...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTTCGATAACTTCCATCTaGATTTTTCAGGACAGTACT +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICSITSI*IFQDST
Trigger: AGTACTGTCCTGAAAAATTCAGATGGAAGTTATCGA...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTACAGTAAGTTGGAACTaGAGGAATTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFTVSWN*RNFEML
Trigger: CAGCATCTCAAAATTCCTTCAGTTCCAACTTACTGT...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR TCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACGGGCATTTATTTCGTTaGAAAGTTGCATCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYGHLFR*KVASAQ
Trigger: TTGTGCTGATGCAACTTTTCAACGAAATAAATGCCC...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTGGGCATTTATTTCGTTaGAAAGTTGCATCAGCACAA +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFGHLFR*KVASAQ
Trigger: TTGTGCTGATGCAACTTTTCAACGAAATAAATGCCC...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTAAAGTTCTGAACAACTaGAAGGTTTTCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICKVLNN*KVFHQT
Trigger: AGTTTGGTGGAAAACCTTTCAGTTGTTCAGAACTTT...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAATGTGTCATAAAGTTGTaGATCGAACTTCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICECVIKL*IELLDS
Trigger: GGAATCAAGAAGTTCGATTCACAACTTTATGACACA...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAATTTCTATTGTAAGGTaGATTCCACTGTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEISIVR*IPLSTA
Trigger: TGCTGTTGACAGTGGAATTCACCTTACAATAGAAAT...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTGTCCATCACAATATGTaGAAAGACCCAGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTVHHNM*KDPVSI
Trigger: AATTGAAACTGGGTCTTTTCACATATTGTGATGGAC...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTTCAAAGAGAACAGACTaGTGCACTGTATATGCAGAA +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFSKRTD*CTVYAE
Trigger: TTCTGCATATACAGTGCATCAGTCTGTTCTCTTTGA...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGGATGGTAAGCATCATTaGAAGAAATCAACACCATCA +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKDGKHH*KKSTPS
Trigger: TGATGGTGTTGATTTCTTTCAATGATGCTTACCATC...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGATCACAAGCATCCAGATaGCTTACTAAGTTATTATCT +
Preference number: 4 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGSQASR*LTKLLS
Trigger: AGATAATAACTTAGTAAGGCATCTGGATGCTTGTGA...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCTCACAAGCATCCAGATaGCTTACTAAGTTATTATCT +
Preference number: 4 (lower is better)
Translates to: PKTRILACPSQYVKRPSFSQASR*LTKLLS
Trigger: AGATAATAACTTAGTAAGGCATCTGGATGCTTGTGA...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGGTAGACTTTGTACAGTaGTTCTTCTGGTATTTCATT +
Preference number: 4 (lower is better)
Translates to: AVTILKCIPIVVKENRLMVDFVQ*FFWYFI
Trigger: AATGAAATACCAGAAGAAGCACTGTACAAAGTCTAC...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGGAGAATAATATCGGATaGTTCTTTAGCTACATCAGT +
Preference number: 4 (lower is better)
Translates to: KSKDKNTSLSITICEKTQENNIG*FFSYIS
Trigger: ACTGATGTAGCTAAAGAAGCATCCGATATTATTCTC...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGAGAGAATAATATCGGATaGTTCTTTAGCTACATCAGT +
Preference number: 4 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGENNIG*FFSYIS
Trigger: ACTGATGTAGCTAAAGAAGCATCCGATATTATTCTC...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTTCGTCCCCACATAACTaGTTTAACAATGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFSSPHN*FNNACK
Trigger: TTTACAAGCATTGTTAAAGCAGTTATGTGGGGACGA...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAATCGTCCCCACATAACTaGTTTAACAATGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICESSPHN*FNNACK
Trigger: TTTACAAGCATTGTTAAAGCAGTTATGTGGGGACGA...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTGGTTTTCCACCAAACTaGACAATTATTATCTGTACC +
Preference number: 4 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTGFPPN*TIIICT
Trigger: GGTACAGATAATAATTGTGCAGTTTGGTGGAAAACC...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTGGTTTTCCACCAAACTaGACAATTATTATCTGTACC +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFGFPPN*TIIICT
Trigger: GGTACAGATAATAATTGTGCAGTTTGGTGGAAAACC...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTGGACTAATTTTTCTCTaGATCAGTTATAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SPKTRILACPSQYVKRPSGLIFL*ISYKEA
Trigger: AGCTTCCTTATAACTGATGCAGAGAAAAATTAGTCC...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTACTGATAGATCTCCTTaGTACCACCAAATTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFTDRSP*YHQISN
Trigger: GTTTGAAATTTGGTGGTAGCAAGGAGATCTATCAGT...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393164.6
CDS-3UTR CCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTAAGTATGCCGTCAGCTaGAAGAAGATCACCATATTT +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFKYAVS*KKITIF
Trigger: AAATATGGTGATCTTCTTCCAGCTGACGGCATACTT...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGGTATTGTATATAAATTaGTGTGCACTCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKVLYIN*CALSKP
Trigger: TGGCTTGCTGAGTGCACACCAATTTATATACAATAC...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGTGGTGGAATAGCTTCTaGTTCAGGAACCTTTTTATA +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKWWNSF*FRNLFI
Trigger: TATAAAAAGGTTCCTGAACCAGAAGCTATTCCACCA...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGAAATGTTTCTTTGCTTaGTCAGCACTCTCAGTTATA +
Preference number: 4 (lower is better)
Translates to: AVTILKCIPIVVKENRLMKCFFA*SALSVI
Trigger: TATAACTGAGAGTGCTGACCAAGCAAAGAAACATTT...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR TCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTTGTGTCATAAAGTTGTaGATCGAACTTCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFCVIKL*IELLDS
Trigger: GGAATCAAGAAGTTCGATTCACAACTTTATGACACA...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACTGTTCAATTCGGCTCTaGAAACCTCTAAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYCSIRL*KPLNCF
Trigger: AAAACAGTTTAGAGGTTTGCAGAGCCGAATTGAACA...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAATCACAAGCATCCAGATaGCTTACTAAGTTATTATCT +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICESQASR*LTKLLS
Trigger: AGATAATAACTTAGTAAGGCATCTGGATGCTTGTGA...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAGTAGACTTTGTACAGTaGTTCTTCTGGTATTTCATT +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEVDFVQ*FFWYFI
Trigger: AATGAAATACCAGAAGAAGCACTGTACAAAGTCTAC...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGTGGAAAATCTCTGAATaGAAGACATATGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LLKSKDKNTSLSITICEKWKISE*KTYGSQ
Trigger: TTGAGAACCATATGTCTTGCATTCAGAGATTTTCCA...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACTTGTCTATCCTCTCTTaGTCAATCTCTCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYLSILS*SISPFS
Trigger: TGAAAAAGGAGAGATTGAGCAAGAGAGGATAGACAA...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTCCTTTAACCAGTGTATaGTTATCAGTAGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFPLTSV*LSVGDD
Trigger: ATCATCTCCTACTGATAAGCATACACTGGTTAAAGG...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTCCTTTAACCAGTGTATaGTTATCAGTAGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFPLTSV*LSVGDD
Trigger: ATCATCTCCTACTGATAAGCATACACTGGTTAAAGG...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAGAATAATATCGGATaGTTCTTTAGCTACATCAGT +
Preference number: 4 (lower is better)
Translates to: CLLLKSKDKNTSLSITICENNIG*FFSYIS
Trigger: ACTGATGTAGCTAAAGAAGCATCCGATATTATTCTC...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACTCGTCCCCACATAACTaGTTTAACAATGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYSSPHN*FNNACK
Trigger: TTTACAAGCATTGTTAAAGCAGTTATGTGGGGACGA...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACGGTTTTCCACCAAACTaGACAATTATTATCTGTACC +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYGFPPN*TIIICT
Trigger: GGTACAGATAATAATTGTGCAGTTTGGTGGAAAACC...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACTGGTGGAATAGCTTCTaGTTCAGGAACCTTTTTATA +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYWWNSF*FRNLFI
Trigger: TATAAAAAGGTTCCTGAACCAGAAGCTATTCCACCA...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAATAGGACAAAATATTTaGTGGAATAGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LLLKSKDKNTSLSITICEIGQNI*WNSFWF
Trigger: GAACCAGAAGCTATTCCACCAAATATTTTGTCCTAT...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CCA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTATAGGACAAAATATTTaGTGGAATAGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SKDKNTSLSITICEKTQFIGQNI*WNSFWF
Trigger: GAACCAGAAGCTATTCCACCAAATATTTTGTCCTAT...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
3UTR CAA 72 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTaGGCTTACACGTGTAAAAAGAAATTTTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLKEINTITVSQ*AYTCKKKFSKS
Trigger: GCTCTTTGAAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
3UTR CAA 72 bp TGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTaGTTTCTTTACAATGCAGCTAGTGTGTTAACATTC +
Preference number: 4 (lower is better)
Translates to: CPSQYVKRPSFN*FLYNAASVLTF
Trigger: GAATGTTAACACACTAGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCTTTTCACATATTGTGATGGACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR GCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTGTAGACTTTGTACAGTaGTTCTTCTGGTATTTCATT +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFVDFVQ*FFWYFI
Trigger: AATGAAATACCAGAAGAAGCACTGTACAAAGTCTAC...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR GCA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACGTAGACTTTGTACAGTaGTTCTTCTGGTATTTCATT +
Preference number: 4 (lower is better)
Translates to: LWIRVGVESHCLELKNEYVDFVQ*FFWYFI
Trigger: AATGAAATACCAGAAGAAGCACTGTACAAAGTCTAC...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR GCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTATTTTCCCAAGATCATaGAGCACATTAATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFIFPRS*STLMAK
Trigger: TTTTGCCATTAATGTGCTGCATGATCTTGGGAAAAT...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CCA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTATAGGACAAAATATTTaGTGGAATAGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: DKNTSLSITICEKTQFQFIGQNI*WNSFWF
Trigger: GAACCAGAAGCTATTCCACCAAATATTTTGTCCTAT...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS CCA 90 bp GCAGGGCTCGGGGCGCCACGCGGAGGTGCAGCTGCACCTCGGGGATaGGGCGGCCAAGGAGCCGAGAGGCTCGGCGTCCACCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: AGLGAPRGGAAAPRG*GGQGAERLGVHQPG
Trigger: CCCCGGCTGGTGGACGCCGAGCCTCTCGGCTCCTTGGCCGCCCCATCCCCGAGGTGCAGCTGCACCTCCGCGTGGCGCCCCGAGCCCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428670.8
CDS GCA 90 bp ACCATAAGGTTTCCGAAGCAAGAGAGACTCAGTGGGTGGTTCCGTTaGCAGAGCCAGGGAAGCGAGTGTATCCATTATGAGGTTTACCCA +
Preference number: 5 (lower is better)
Translates to: TIRFPKQERLSGWFR*QSQGSECIHYEVYP
Trigger: TGGGTAAACCTCATAATGGATACACTCGCTTCCCTGGCTCTGGCAACGGAACCACCCACTGAGTCTCTCTTGCTTCGGAAACCTTATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000551009.5
CDS-3UTR CAA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGCCAGGGCTCTTTGTCTaGCCCAGTTTTACTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PYALWALQLIGSIFRVERPGLFV*PSFTPP
Trigger: GGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGG...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS TCA 90 bp CCTCTAAACCACAAGATTTGGCCACGCCGCAACTCCCTTTCAGCGTaGTCAATCTCTTCAACATCCTCTGCTAATTCCTCCTCAGGTATT +
Preference number: 5 (lower is better)
Translates to: PLNHKIWPRRNSLSA*SISSTSSANSSSGI
Trigger: AATACCTGAGGAGGAATTAGCAGAGGATGTTGAAGAGATTGATCACGCTGAAAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000550716.1
ENST00000635033.1
CDS-3UTR CAA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTACGATCCAGGGCTCTTaGTCTTGCCCAGTTTTACTC +
Preference number: 5 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPTIQGS*SCPVLL
Trigger: GAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGT...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS GCA 90 bp GTCCTGTGGATTCTACCTCAAACTTGCCCTGCATCATGTCTCTGTTaGTTGTTGCCCAACCTACTGCAATGGCTTTTTATAAGGTACCCT +
Preference number: 5 (lower is better)
Translates to: VLWILPQTCPASCLC*LLPNLLQWLFIRYP
Trigger: AGGGTACCTTATAAAAAGCCATTGCAGTAGGTTGGGCAACAAGCAACAGAGACATGATGCAGGGCAAGTTTGAGGTAGAATCCACAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549727.1
CDS-3UTR CAA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTCACCATCCTGGGCTTTaGCTTTGTTGCGATTCTCAA +
Preference number: 5 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSHHPGL*LCCDSQ
Trigger: TTGAGAATCGCAACAAAGCAAAAGCCCAGGATGGTG...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTCTAAACCACAAGATTaGGCCACGCCGCAACTCCCT +
Preference number: 5 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQSKPQD*ATPQLP
Trigger: AGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAGA...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTAAACCACAAGATTaGGCCACGCCGCAACTCCCT +
Preference number: 5 (lower is better)
Translates to: TDDPQVTYAELLFICQFISKPQD*ATPQLP
Trigger: AGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAGA...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATCTAAACCACAAGATTaGGCCACGCCGCAACTCCCT +
Preference number: 5 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITSKPQD*ATPQLP
Trigger: AGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAGA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGACAGCATTGTTATTTTaGTTGGGAGAGGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: PYALWALQLIGSIFRVERTALLF*LGEGGG
Trigger: TCCTCCACCCTCTCCCAACAAAAATAACAATGCTGT...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGACCAGGGCTCTTTGTCTaGCCCAGTTTTACTCCTCCC +
Preference number: 5 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGPGLFV*PSFTPP
Trigger: GGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGG...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTCCAGGGCTCTTTGTCTaGCCCAGTTTTACTCCTCCC +
Preference number: 5 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSPGLFV*PSFTPP
Trigger: GGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGG...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTACGATCCAGGGCTCTTaGTCTTGCCCAGTTTTACTC +
Preference number: 5 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCTIQGS*SCPVLL
Trigger: GAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGT...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CTGCTAATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCTTGTGGGCTCTCCAGTaGATAGGGTCAATTTTTAGA +
Preference number: 5 (lower is better)
Translates to: LLIHCSGPCLGTTDDPQVLWALQ*IGSIFR
Trigger: TCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA...GACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTATTAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTCTATTCCCTATGCCTaGTGGGCTCTCCAGTTGATA +
Preference number: 5 (lower is better)
Translates to: CLGTTDDPQVTYAELLFISIPYA*WALQLI
Trigger: TATCAACTGGAGAGCCCACAAGGCATAGGGAATAGA...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACCAAGTACTCGAAGTTTaGGCCAAATCTTGTCTATCC +
Preference number: 5 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYQVLEV*AKSCLS
Trigger: GGATAGACAAGATTTGGCCAAAACTTCGAGTACTTG...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTTTCCAGCAATACCCATaGCAAATCCAACATCTGCTT +
Preference number: 5 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSFQQYP*QIQHLL
Trigger: AAGCAGATGTTGGATTTGCAATGGGTATTGCTGGAA...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACTTCCAGCAATACCCATaGCAAATCCAACATCTGCTT +
Preference number: 5 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYFQQYP*QIQHLL
Trigger: AAGCAGATGTTGGATTTGCAATGGGTATTGCTGGAA...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACCGGGCATTTATTTCGTaGAAAAGTTGCATCAGCACA +
Preference number: 5 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYRAFIS*KSCIST
Trigger: TGTGCTGATGCAACTTTTCAACGAAATAAATGCCCG...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCTAAACCACAAGATTaGGCCACGCCGCAACTCCCT +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQSKPQD*ATPQLP
Trigger: AGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAGA...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTGTTCAGGACCATGCTaGGGTACTACTGATGATCCA +
Preference number: 5 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQCSGPC*GTTDDP
Trigger: TGGATCATCAGTAGTACCCAAGCATGGTCCTGAACA...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAACCAGGGCTCTTTGTCTaGCCCAGTTTTACTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LLLKSKDKNTSLSITICEPGLFV*PSFTPP
Trigger: GGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGG...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACTTGTGGGCTCTCCAGTaGATAGGGTCAATTTTTAGA +
Preference number: 5 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYLWALQ*IGSIFR
Trigger: TCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTTACATCCATCTGTGTTaGGATTCTGTTCAGACCTCT +
Preference number: 5 (lower is better)
Translates to: TINSTIQGSLSCPVLLLPYIHLC*DSVQTS
Trigger: AGAGGTCTGAACAGAATCCAAACACAGATGGATGTA...AGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000635033.1
CDS CCA 90 bp CCCCTACCTCACTGTAAGAGGAGAGTCATAGTTCCACCTGTAAAGTaGGTATCGATTCAGGTGTCTAAAAGTGAAACCATGTTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: PLPHCKRRVIVPPVK*VSIQVSKSETMFPL
Trigger: TAAAGGAAACATGGTTTCACTTTTAGACACCTGAATCGATACCCACTTTACAGGTGGAACTATGACTCTCCTCTTACAGTGAGGTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549727.1
CDS-3UTR CAA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTAAGCAACTGAGTTGTTaGCCATGTCGCCCATTACAA +
Preference number: 5 (lower is better)
Translates to: LGTTDDPQVTYAELLFICKQLSC*PCRPLQ
Trigger: TTGTAATGGGCGACATGGCAAACAACTCAGTTGCTT...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAATCCTGGGCTTTTGCTTaGTTGCGATTCTCAATAGCT +
Preference number: 5 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKSWAFA*LRFSIA
Trigger: AGCTATTGAGAATCGCAACAAAGCAAAAGCCCAGGA...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGCACTCGAATCTGTGTTaGGATTCTGTTCAGACCTCT +
Preference number: 5 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQHSNLC*DSVQTS
Trigger: AGAGGTCTGAACAGAATCCAAACACAGATTCGAGTG...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261173.6
ENST00000428670.8
CDS-3UTR CAA 90 bp ATACACTGTTCAGGACCATGCTTGGGTACTACTGATGATCCACAGGTCACTTACGAAGAGGTAGCAGACTaGTTCATTTCTATTGTAAGG +
Preference number: 5 (lower is better)
Translates to: IHCSGPCLGTTDDPQVTYEEVAD*FISIVR
Trigger: CCTTACAATAGAAATGAACAAGTCTGCTACCTCTTC...GTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGGTCCTGAACAGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCTCCCTCTCAAGTGTGTCTTCTGTaGAAGTCCAAAGACAAGAAT +
Preference number: 5 (lower is better)
Translates to: YQFNDPGLFVLPSFTPPSQVCLL*KSKDKN
Trigger: ATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG...AGAGGGAGGAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAACGATCCAGGGCTCTTaGTCTTGCCCAGTTTTACTC +
Preference number: 5 (lower is better)
Translates to: SLKEINTITVSQLAYTCKTIQGS*SCPVLL
Trigger: GAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGT...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS GCA 90 bp GGTGACAATATCATTTTCATTATCCCACTCTGGTTCTGGTTCTCCTaGTGGAAAATCTCTGAATGCAAGACATATGGTTCTCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: GDNIIFIIPLWFWFS*WKISECKTYGSQAF
Trigger: GAAGGCTTGAGAACCATATGTCTTGCATTCAGAGATTTTCCAGCAGGAGAACCAGAACCAGAGTGGGATAATGAAAATGATATTGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS CCA 90 bp TGTAAGGCCGGTGACAATATCATTTTCATTATCCCACTCTGGTTCTaGTTCTCCTGCTGGAAAATCTCTGAATGCAAGACATATGGTTCT +
Preference number: 5 (lower is better)
Translates to: CKAGDNIIFIIPLWF*FSCWKISECKTYGS
Trigger: AGAACCATATGTCTTGCATTCAGAGATTTTCCAGCAGGAGAACCAGAACCAGAGTGGGATAATGAAAATGATATTGTCACCGGCCTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGCTACAGACAAGAGGATaGCAGCTCCTTCAATCCAAC +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQLQTRG*QLLQSN
Trigger: GTTGGATTGAAGGAGCTGCAATCCTCTTGTCTGTAG...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTTCCTTACTCCAGTCATaGAAAGCTGTTACTAACACC +
Preference number: 5 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCSLLQS*KAVTNT
Trigger: GGTGTTAGTAACAGCTTTCAATGACTGGAGTAAGGA...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAATGGGCTTTTGCTTTGTaGCGATTCTCAATAGCTCCA +
Preference number: 5 (lower is better)
Translates to: LWALQLIGSIFRVERVLQWAFAL*RFSIAP
Trigger: TGGAGCTATTGAGAATCGCAACAAAGCAAAAGCCCA...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTTGGGCTTTTGCTTTGTaGCGATTCTCAATAGCTCCA +
Preference number: 5 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLWAFAL*RFSIAP
Trigger: TGGAGCTATTGAGAATCGCAACAAAGCAAAAGCCCA...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATGGGCTTTTGCTTTGTaGCGATTCTCAATAGCTCCA +
Preference number: 5 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITWAFAL*RFSIAP
Trigger: TGGAGCTATTGAGAATCGCAACAAAGCAAAAGCCCA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACATCCTGGGCTTTTGCTTaGTTGCGATTCTCAATAGCT +
Preference number: 5 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITSWAFA*LRFSIA
Trigger: AGCTATTGAGAATCGCAACAAAGCAAAAGCCCAGGA...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAATCCTGGGCTTTTGCTTaGTTGCGATTCTCAATAGCT +
Preference number: 5 (lower is better)
Translates to: LWALQLIGSIFRVERVLQSWAFA*LRFSIA
Trigger: AGCTATTGAGAATCGCAACAAAGCAAAAGCCCAGGA...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGCACCATCCTGGGCTTTaGCTTTGTTGCGATTCTCAA +
Preference number: 5 (lower is better)
Translates to: AVTILKCIPIVVKENRLMHHPGL*LCCDSQ
Trigger: TTGAGAATCGCAACAAAGCAAAAGCCCAGGATGGTG...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCCACCATCCTGGGCTTTaGCTTTGTTGCGATTCTCAA +
Preference number: 5 (lower is better)
Translates to: PKTRILACPSQYVKRPSFHHPGL*LCCDSQ
Trigger: TTGAGAATCGCAACAAAGCAAAAGCCCAGGATGGTG...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGCAAGTACTCGAAGTTTaGGCCAAATCTTGTCTATCC +
Preference number: 5 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQQVLEV*AKSCLS
Trigger: GGATAGACAAGATTTGGCCAAAACTTCGAGTACTTG...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CCCTATGCCTTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGAAAGACTACTACAAGTaGATAGAATGCATGACCCAA +
Preference number: 5 (lower is better)
Translates to: PYALWALQLIGSIFRVERKDYYK*IECMTQ
Trigger: TTGGGTCATGCATTCTATCAACTTGTAGTAGTCTTT...CCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAAGGCATAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AGTAGCAGTCCTCGTAAACTTTATGTCAGCCTGAGGATTGTGTATCTGGTGAAACGGGCATTTATTTCGTaGAAAAGTTGCATCAGCACA +
Preference number: 5 (lower is better)
Translates to: SSSPRKLYVSLRIVYLVKRAFIS*KSCIST
Trigger: TGTGCTGATGCAACTTTTCAACGAAATAAATGCCCG...TTTCACCAGATACACAATCCTCAGGCTGACATAAAGTTTACGAGGACTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTCCATTCCTAGGAATATaGACCATAGCCACTGTTCTA +
Preference number: 5 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCPFLGI*TIATVL
Trigger: TAGAACAGTGGCTATGGTCAATATTCCTAGGAATGG...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCACAGCATTGTTATTTTaGTTGGGAGAGGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLTALLF*LGEGGG
Trigger: TCCTCCACCCTCTCCCAACAAAAATAACAATGCTGT...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCTGTTCAGGACCATGCTaGGGTACTACTGATGATCCA +
Preference number: 5 (lower is better)
Translates to: PKTRILACPSQYVKRPSFCSGPC*GTTDDP
Trigger: TGGATCATCAGTAGTACCCAAGCATGGTCCTGAACA...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTGGGGCTGTTACCATCTaGAAATGTATTCCAATTGTG +
Preference number: 5 (lower is better)
Translates to: QQKLNYQFNDPGLFVLPSGAVTI*KCIPIV
Trigger: CACAATTGGAATACATTTCAAGATGGTAACAGCCCC...ACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCTATTCCCTATGCCTaGTGGGCTCTCCAGTTGATA +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQSIPYA*WALQLI
Trigger: TATCAACTGGAGAGCCCACAAGGCATAGGGAATAGA...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS TCA 90 bp TGCTGGAAAATCTCTGAATGCAAGACATATGGTTCTCAAGCCTTCTaGTGCCATCGGTTCAATCACAGTTTTTACAATATCATCACGGTC +
Preference number: 5 (lower is better)
Translates to: CWKISECKTYGSQAF*CHRFNHSFYNIITV
Trigger: GACCGTGATGATATTGTAAAAACTGTGATTGAACCGATGGCATCAGAAGGCTTGAGAACCATATGTCTTGCATTCAGAGATTTTCCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS CCA 90 bp AAGCAGCATCAGCAGCAACATTTCCCAGAGAAGTATCTTGACCTTTaGCCCATGACTAGTTTCTCCATATCAATCATGAGATATACACAT +
Preference number: 5 (lower is better)
Translates to: KQHQQQHFPEKYLDL*PMTSFSISIMRYTH
Trigger: ATGTGTATATCTCATGATTGATATGGAGAAACTAGTCATGGGCCAAAGGTCAAGATACTTCTCTGGGAAATGTTGCTGCTGATGCTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359142.7
ENST00000428670.8
ENST00000551310.1
CDS-3UTR CAA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTAAGCAACTGAGTTGTTaGCCATGTCGCCCATTACAA +
Preference number: 5 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSKQLSC*PCRPLQ
Trigger: TTGTAATGGGCGACATGGCAAACAACTCAGTTGCTT...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAAGCAACTGAGTTGTTaGCCATGTCGCCCATTACAA +
Preference number: 5 (lower is better)
Translates to: PKTRILACPSQYVKRPSFKQLSC*PCRPLQ
Trigger: TTGTAATGGGCGACATGGCAAACAACTCAGTTGCTT...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCTACAGACAAGAGGATaGCAGCTCCTTCAATCCAAC +
Preference number: 5 (lower is better)
Translates to: SKDKNTSLSITICEKTQFLQTRG*QLLQSN
Trigger: GTTGGATTGAAGGAGCTGCAATCCTCTTGTCTGTAG...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCTCCTTACTCCAGTCATaGAAAGCTGTTACTAACACC +
Preference number: 5 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLSLLQS*KAVTNT
Trigger: GGTGTTAGTAACAGCTTTCAATGACTGGAGTAAGGA...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TGCTTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCATCACCATATTTCACTaGAGCAATATCTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: CLGTTDDPQVTYAELLFIITIFH*SNISNS
Trigger: ACTGTTGGAGATATTGCTCAAGTGAAATATGGTGAT...GATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCTTTAAGATCGTTGCCTaGAATAAGTATGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPFKIVA*NKYAVS
Trigger: GCTGACGGCATACTTATTCAAGGCAACGATCTTAAA...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTCACCATCCTGGGCTTTaGCTTTGTTGCGATTCTCAA +
Preference number: 5 (lower is better)
Translates to: CLLLKSKDKNTSLSITICHHPGL*LCCDSQ
Trigger: TTGAGAATCGCAACAAAGCAAAAGCCCAGGATGGTG...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTAGTATTGTATATAAATaGGTGTGCACTCAGCAAGCC +
Preference number: 5 (lower is better)
Translates to: LGTTDDPQVTYAELLFICSIVYK*VCTQQA
Trigger: GGCTTGCTGAGTGCACACCAATTTATATACAATACT...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTAGTTTTGGCCAAATCTaGTCTATCCTCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLSFGQI*SILSCS
Trigger: TGAGCAAGAGAGGATAGACAAGATTTGGCCAAAACT...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAATTCCAGCAATACCCATaGCAAATCCAACATCTGCTT +
Preference number: 5 (lower is better)
Translates to: LWALQLIGSIFRVERVLQFQQYP*QIQHLL
Trigger: AAGCAGATGTTGGATTTGCAATGGGTATTGCTGGAA...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TTGGGTACTACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTGTGCAGAAGATGGCATaGTTAAAGATTCCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: LGTTDDPQVTYAELLFICVQKMA*LKIPSN
Trigger: ATTCGAAGGAATCTTTAACAATGCCATCTTCTGCAC...ACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTAGGTATTTCTTCCTTTaGTGTTCCATGACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLRYFFL*CSMTSF
Trigger: GAAGCTGGTCATGGAACACAAAAGGAAGAAATACCT...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAAGGTATTTCTTCCTTTaGTGTTCCATGACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITRYFFL*CSMTSF
Trigger: GAAGCTGGTCATGGAACACAAAAGGAAGAAATACCT...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCACTCGAATCTGTGTTaGGATTCTGTTCAGACCTCT +
Preference number: 5 (lower is better)
Translates to: SPKTRILACPSQYVKRPSHSNLC*DSVQTS
Trigger: AGAGGTCTGAACAGAATCCAAACACAGATTCGAGTG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCCACTCGAATCTGTGTTaGGATTCTGTTCAGACCTCT +
Preference number: 5 (lower is better)
Translates to: PKTRILACPSQYVKRPSFHSNLC*DSVQTS
Trigger: AGAGGTCTGAACAGAATCCAAACACAGATTCGAGTG...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp ACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTGTGAATCGAACTTCTaGATTCCGGTTTTTCTAACC +
Preference number: 5 (lower is better)
Translates to: TAEIKLSIQRSRALCLAQCESNF*IPVFLT
Trigger: GGTTAGAAAAACCGGAATCAAGAAGTTCGATTCACA...CTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGAACAGCATTGTTATTTTaGTTGGGAGAGGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGTALLF*LGEGGG
Trigger: TCCTCCACCCTCTCCCAACAAAAATAACAATGCTGT...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGACAGCATTGTTATTTTaGTTGGGAGAGGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQTALLF*LGEGGG
Trigger: TCCTCCACCCTCTCCCAACAAAAATAACAATGCTGT...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TACCAGCAAGGAATTAAAGCGGTACTTCATGGGGCTGTTACCATCTTGAAATGTCAAGTGTGTCTTCTGTaGAAGTCCAAAGACAAGAAT +
Preference number: 5 (lower is better)
Translates to: YQQGIKAVLHGAVTILKCQVCLL*KSKDKN
Trigger: ATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG...ACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTTAATTCCTTGCTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGTGTTCAGGACCATGCTaGGGTACTACTGATGATCCA +
Preference number: 5 (lower is better)
Translates to: LLKSKDKNTSLSITICEKCSGPC*GTTDDP
Trigger: TGGATCATCAGTAGTACCCAAGCATGGTCCTGAACA...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACACGATCCAGGGCTCTTaGTCTTGCCCAGTTTTACTC +
Preference number: 5 (lower is better)
Translates to: LWIRVGVESHCLELKNEYTIQGS*SCPVLL
Trigger: GAGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGT...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCCAACTAAATGTTTCTTaGCTTGGTCAGCACTCTCAG +
Preference number: 5 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPQLNVS*LGQHSQ
Trigger: CTGAGAGTGCTGACCAAGCAAAGAAACATTTAGTTG...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCCAACTAAATGTTTCTTaGCTTGGTCAGCACTCTCAG +
Preference number: 5 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLQLNVS*LGQHSQ
Trigger: CTGAGAGTGCTGACCAAGCAAAGAAACATTTAGTTG...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTCAACTAAATGTTTCTTaGCTTGGTCAGCACTCTCAG +
Preference number: 5 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLQLNVS*LGQHSQ
Trigger: CTGAGAGTGCTGACCAAGCAAAGAAACATTTAGTTG...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTTCTCTTGTGGGCTCTCCAGTaGATAGGGTCAATTTTTAGA +
Preference number: 5 (lower is better)
Translates to: MIHRSLTLSYCLSVSSFLLWALQ*IGSIFR
Trigger: TCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA...GAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTTCCTTACTCCAGTCATaGAAAGCTGTTACTAACACC +
Preference number: 5 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSSLLQS*KAVTNT
Trigger: GGTGTTAGTAACAGCTTTCAATGACTGGAGTAAGGA...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTAAGATCGTTGCCTaGAATAAGTATGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQFKIVA*NKYAVS
Trigger: GCTGACGGCATACTTATTCAAGGCAACGATCTTAAA...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTTGGGCTTTTGCTTTGTaGCGATTCTCAATAGCTCCA +
Preference number: 5 (lower is better)
Translates to: CLLLKSKDKNTSLSITICWAFAL*RFSIAP
Trigger: TGGAGCTATTGAGAATCGCAACAAAGCAAAAGCCCA...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCAAGTACTCGAAGTTTaGGCCAAATCTTGTCTATCC +
Preference number: 5 (lower is better)
Translates to: SPKTRILACPSQYVKRPSQVLEV*AKSCLS
Trigger: GGATAGACAAGATTTGGCCAAAACTTCGAGTACTTG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCTTCCAGCAATACCCATaGCAAATCCAACATCTGCTT +
Preference number: 5 (lower is better)
Translates to: PKTRILACPSQYVKRPSFFQQYP*QIQHLL
Trigger: AAGCAGATGTTGGATTTGCAATGGGTATTGCTGGAA...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGTGCAGAAGATGGCATaGTTAAAGATTCCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: LWALQLIGSIFRVERVLQVQKMA*LKIPSN
Trigger: ATTCGAAGGAATCTTTAACAATGCCATCTTCTGCAC...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGTGCAGAAGATGGCATaGTTAAAGATTCCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLVQKMA*LKIPSN
Trigger: ATTCGAAGGAATCTTTAACAATGCCATCTTCTGCAC...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGCCATTCCTAGGAATATaGACCATAGCCACTGTTCTA +
Preference number: 5 (lower is better)
Translates to: AVTILKCIPIVVKENRLMPFLGI*TIATVL
Trigger: TAGAACAGTGGCTATGGTCAATATTCCTAGGAATGG...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGAGGTATTTCTTCCTTTaGTGTTCCATGACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQRYFFL*CSMTSF
Trigger: GAAGCTGGTCATGGAACACAAAAGGAAGAAATACCT...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTTGTGAATCGAACTTCTaGATTCCGGTTTTTCTAACC +
Preference number: 5 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLCESNF*IPVFLT
Trigger: GGTTAGAAAAACCGGAATCAAGAAGTTCGATTCACA...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTACAGCATTGTTATTTTaGTTGGGAGAGGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: CLLLKSKDKNTSLSITICTALLF*LGEGGG
Trigger: TCCTCCACCCTCTCCCAACAAAAATAACAATGCTGT...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CTAAGACCTGCAGAGGATTACTGCAAAGATTTGATGGTGAGAAAAAGATTTCCCGAAGAGGTAGCAGACTaGTTCATTTCTATTGTAAGG +
Preference number: 5 (lower is better)
Translates to: LRPAEDYCKDLMVRKRFPEEVAD*FISIVR
Trigger: CCTTACAATAGAAATGAACAAGTCTGCTACCTCTTC...GGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACACAAGTGTGTCTTCTGTaGAAGTCCAAAGACAAGAAT +
Preference number: 5 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITQVCLL*KSKDKN
Trigger: ATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCGGGGCTGTTACCATCTaGAAATGTATTCCAATTGTG +
Preference number: 5 (lower is better)
Translates to: PKTRILACPSQYVKRPSFGAVTI*KCIPIV
Trigger: CACAATTGGAATACATTTCAAGATGGTAACAGCCCC...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TTATGGATTAGAGTTGGTGTAGAAAGCCATTGCCTTGAGTTGAAAAATGAATACTCTATTCCCTATGCCTaGTGGGCTCTCCAGTTGATA +
Preference number: 5 (lower is better)
Translates to: LWIRVGVESHCLELKNEYSIPYA*WALQLI
Trigger: TATCAACTGGAGAGCCCACAAGGCATAGGGAATAGA...GTATTCATTTTTCAACTCAAGGCAATGGCTTTCTACACCAACTCTAATCCATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ACTGATGATCCACAGGTCACTTACGCTGAGTTACTGTTTATCTGTCAGTTCATTCACACTAAGCATGTCTaGCTACTACTTCATAGATGT +
Preference number: 5 (lower is better)
Translates to: TDDPQVTYAELLFICQFIHTKHV*LLLHRC
Trigger: ACATCTATGAAGTAGTAGCAAGACATGCTTAGTGTG...AATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp ACACTAAGCATGTCTTGCTACTACTTCATAGATGTCATAAGACCCGTTTATGGAATCACGGTATCTCAGTaGGCTTACACGTGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: TLSMSCYYFIDVIRPVYGITVSQ*AYTCKK
Trigger: CTTTTTACACGTGTAAGCCAACTGAGATACCGTGAT...TCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp GCTGTTACCATCTTGAAATGTATTCCAATTGTGGTCAAAGAGAACAGACTGATGATCACGGTATCTCAGTaGGCTTACACGTGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: AVTILKCIPIVVKENRLMITVSQ*AYTCKK
Trigger: CTTTTTACACGTGTAAGCCAACTGAGATACCGTGAT...CATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS CCA 90 bp CTGCAGGGTTTCCACTTAAACCTTCATTGGGAGATGTTTTCAATTTaGTGCAAATTCCATAGACATCTCCATAGCTTTCCTGTATTTTTC +
Preference number: 5 (lower is better)
Translates to: LQGFHLNLHWEMFSI*CKFHRHLHSFPVFF
Trigger: GAAAAATACAGGAAAGCTATGGAGATGTCTATGGAATTTGCACCAAATTGAAAACATCTCCCAATGAAGGTTTAAGTGGAAACCCTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000549585.1
CDS-3UTR CAA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATCACCATATTTCACTaGAGCAATATCTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITITIFH*SNISNS
Trigger: ACTGTTGGAGATATTGCTCAAGTGAAATATGGTGAT...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTTCCTGGGCTTTTGCTTaGTTGCGATTCTCAATAGCT +
Preference number: 5 (lower is better)
Translates to: DKNTSLSITICEKTQFQFSWAFA*LRFSIA
Trigger: AGCTATTGAGAATCGCAACAAAGCAAAAGCCCAGGA...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp CCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAGTATTGTATATAAATaGGTGTGCACTCAGCAAGCC +
Preference number: 5 (lower is better)
Translates to: PKTRILACPSQYVKRPSFSIVYK*VCTQQA
Trigger: GGCTTGCTGAGTGCACACCAATTTATATACAATACT...GAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp TCATTGAAAGAAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAGTATTGTATATAAATaGGTGTGCACTCAGCAAGCC +
Preference number: 5 (lower is better)
Translates to: SLKEINTITVSQLAYTCKSIVYK*VCTQQA
Trigger: GGCTTGCTGAGTGCACACCAATTTATATACAATACT...TTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTAGTTTTGGCCAAATCTaGTCTATCCTCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTSFGQI*SILSCS
Trigger: TGAGCAAGAGAGGATAGACAAGATTTGGCCAAAACT...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGAGTTTTGGCCAAATCTaGTCTATCCTCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LLKSKDKNTSLSITICEKSFGQI*SILSCS
Trigger: TGAGCAAGAGAGGATAGACAAGATTTGGCCAAAACT...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAAGTACTCGAAGTTTaGGCCAAATCTTGTCTATCC +
Preference number: 5 (lower is better)
Translates to: SKDKNTSLSITICEKTQFQVLEV*AKSCLS
Trigger: GGATAGACAAGATTTGGCCAAAACTTCGAGTACTTG...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAAAAGACTACTACAAGTaGATAGAATGCATGACCCAA +
Preference number: 5 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITKDYYK*IECMTQ
Trigger: TTGGGTCATGCATTCTATCAACTTGTAGTAGTCTTT...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp CAGCCAACAGCAGAAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTAAAGACTACTACAAGTaGATAGAATGCATGACCCAA +
Preference number: 5 (lower is better)
Translates to: QPTAEIKLSIQRSRALCLKDYYK*IECMTQ
Trigger: TTGGGTCATGCATTCTATCAACTTGTAGTAGTCTTT...AAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCGGGCATTTATTTCGTaGAAAAGTTGCATCAGCACA +
Preference number: 5 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTRAFIS*KSCIST
Trigger: TGTGCTGATGCAACTTTTCAACGAAATAAATGCCCG...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTCGGGCATTTATTTCGTaGAAAAGTTGCATCAGCACA +
Preference number: 5 (lower is better)
Translates to: CLLLKSKDKNTSLSITICRAFIS*KSCIST
Trigger: TGTGCTGATGCAACTTTTCAACGAAATAAATGCCCG...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGGTGCAGAAGATGGCATaGTTAAAGATTCCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQVQKMA*LKIPSN
Trigger: ATTCGAAGGAATCTTTAACAATGCCATCTTCTGCAC...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTCCATTCCTAGGAATATaGACCATAGCCACTGTTCTA +
Preference number: 5 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTPFLGI*TIATVL
Trigger: TAGAACAGTGGCTATGGTCAATATTCCTAGGAATGG...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTCCATTCCTAGGAATATaGACCATAGCCACTGTTCTA +
Preference number: 5 (lower is better)
Translates to: CLLLKSKDKNTSLSITICPFLGI*TIATVL
Trigger: TAGAACAGTGGCTATGGTCAATATTCCTAGGAATGG...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGCCATTCCTAGGAATATaGACCATAGCCACTGTTCTA +
Preference number: 5 (lower is better)
Translates to: LLKSKDKNTSLSITICEKPFLGI*TIATVL
Trigger: TAGAACAGTGGCTATGGTCAATATTCCTAGGAATGG...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp AAATTAAACTATCAATTCAACGATCCAGGGCTCTTTGTCTTGCCCAGTTTTACTAGGTATTTCTTCCTTTaGTGTTCCATGACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KLNYQFNDPGLFVLPSFTRYFFL*CSMTSF
Trigger: GAAGCTGGTCATGGAACACAAAAGGAAGAAATACCT...AGTAAAACTGGGCAAGACAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTAGGTATTTCTTCCTTTaGTGTTCCATGACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SKDKNTSLSITICEKTQFRYFFL*CSMTSF
Trigger: GAAGCTGGTCATGGAACACAAAAGGAAGAAATACCT...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTGTGAATCGAACTTCTaGATTCCGGTTTTTCTAACC +
Preference number: 5 (lower is better)
Translates to: SPKTRILACPSQYVKRPSCESNF*IPVFLT
Trigger: GGTTAGAAAAACCGGAATCAAGAAGTTCGATTCACA...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTGTGAATCGAACTTCTaGATTCCGGTTTTTCTAACC +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQCESNF*IPVFLT
Trigger: GGTTAGAAAAACCGGAATCAAGAAGTTCGATTCACA...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CAAGTGTGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAAGACCCAGTTTCAATTaGTTTCTTTACAATGCAGCT +
Preference number: 5 (lower is better)
Translates to: QVCLLLKSKDKNTSLSITRPSFN*FLYNAA
Trigger: AGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCT...TGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TTGTGGGCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGACAAGAATACTAGCTaGTCCATCACAATATGTGAA +
Preference number: 5 (lower is better)
Translates to: LWALQLIGSIFRVERVLQDKNTS*SITICE
Trigger: TTCACATATTGTGATGGACAAGCTAGTATTCTTGTC...TTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGCCCACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGCAAGTGTGTCTTCTGTaGAAGTCCAAAGACAAGAAT +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQQVCLL*KSKDKN
Trigger: ATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCAAGTGTGTCTTCTGTaGAAGTCCAAAGACAAGAAT +
Preference number: 5 (lower is better)
Translates to: SPKTRILACPSQYVKRPSQVCLL*KSKDKN
Trigger: ATTCTTGTCTTTGGACTTCAACAGAAGACACACTTG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAGGGGCTGTTACCATCTaGAAATGTATTCCAATTGTG +
Preference number: 5 (lower is better)
Translates to: LLLKSKDKNTSLSITICEGAVTI*KCIPIV
Trigger: CACAATTGGAATACATTTCAAGATGGTAACAGCCCC...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTCACACTAAGCATGTCTaGCTACTACTTCATAGATGT +
Preference number: 5 (lower is better)
Translates to: SPKTRILACPSQYVKRPSHTKHV*LLLHRC
Trigger: ACATCTATGAAGTAGTAGCAAGACATGCTTAGTGTG...ACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTCACACTAAGCATGTCTaGCTACTACTTCATAGATGT +
Preference number: 5 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSHTKHV*LLLHRC
Trigger: ACATCTATGAAGTAGTAGCAAGACATGCTTAGTGTG...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGTACATCCATCTGTGTTaGGATTCTGTTCAGACCTCT +
Preference number: 5 (lower is better)
Translates to: LLKSKDKNTSLSITICEKYIHLC*DSVQTS
Trigger: AGAGGTCTGAACAGAATCCAAACACAGATGGATGTA...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000635033.1
CDS TCA 90 bp ATTTCAAGGAGGTATACAAATTACAACTTAGCTAGACCTTTTATTTaGTCTGAAATGGCAGCATGGAAGGAGCTAGAGAAACCTGGGATT +
Preference number: 5 (lower is better)
Translates to: ISRRYTNYNLARPFI*SEMAAWKELEKPGI
Trigger: AATCCCAGGTTTCTCTAGCTCCTTCCATGCTGCCATTTCAGATCAAATAAAAGGTCTAGCTAAGTTGTAATTTGTATACCTCCTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552275.1
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGATCACCATATTTCACTaGAGCAATATCTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQITIFH*SNISNS
Trigger: ACTGTTGGAGATATTGCTCAAGTGAAATATGGTGAT...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTTTTAAGATCGTTGCCTaGAATAAGTATGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFFKIVA*NKYAVS
Trigger: GCTGACGGCATACTTATTCAAGGCAACGATCTTAAA...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAGTATTGTATATAAATaGGTGTGCACTCAGCAAGCC +
Preference number: 5 (lower is better)
Translates to: LLLKSKDKNTSLSITICESIVYK*VCTQQA
Trigger: GGCTTGCTGAGTGCACACCAATTTATATACAATACT...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS-3UTR CAA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTAGTTTTGGCCAAATCTaGTCTATCCTCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFSFGQI*SILSCS
Trigger: TGAGCAAGAGAGGATAGACAAGATTTGGCCAAAACT...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTCGGGCATTTATTTCGTaGAAAAGTTGCATCAGCACA +
Preference number: 5 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFRAFIS*KSCIST
Trigger: TGTGCTGATGCAACTTTTCAACGAAATAAATGCCCG...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGTGCAGAAGATGGCATaGTTAAAGATTCCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: CLLLKSKDKNTSLSITICVQKMA*LKIPSN
Trigger: ATTCGAAGGAATCTTTAACAATGCCATCTTCTGCAC...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGGAAGAGGTAGCAGACTaGTTCATTTCTATTGTAAGG +
Preference number: 5 (lower is better)
Translates to: LLKSKDKNTSLSITICEKEEVAD*FISIVR
Trigger: CCTTACAATAGAAATGAACAAGTCTGCTACCTCTTC...CTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp CTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAGAAGAGGTAGCAGACTaGTTCATTTCTATTGTAAGG +
Preference number: 5 (lower is better)
Translates to: LLLKSKDKNTSLSITICEEEVAD*FISIVR
Trigger: CCTTACAATAGAAATGAACAAGTCTGCTACCTCTTC...TTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp GCTCTCCAGTTGATAGGGTCAATTTTTAGAGTTGAAAGGGTTCTTCAAGATAGTAGACCCAGTTTCAATTaGTTTCTTTACAATGCAGCT +
Preference number: 5 (lower is better)
Translates to: ALQLIGSIFRVERVLQDSRPSFN*FLYNAA
Trigger: AGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCT...ACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp AAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGGACAAGAATACTAGCTaGTCCATCACAATATGTGAA +
Preference number: 5 (lower is better)
Translates to: KSKDKNTSLSITICEKTQDKNTS*SITICE
Trigger: TTCACATATTGTGATGGACAAGCTAGTATTCTTGTC...CTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS TCA 90 bp ATGATTAGCTTCCTTCAAAGAGTTTTTCACACCACTGTAAGCAACTaGGTTGTTTGCCATGTCGCCCATTACAAGTATAATATATCAGAA +
Preference number: 5 (lower is better)
Translates to: MISFLQRVFHTTVSN*VVCHVAHYKYNISE
Trigger: TTCTGATATATTATACTTGTAATGGGCGACATGGCAAACAACTCAGTTGCTTACAGTGGTGTGAAAAACTCTTTGAAGGAAGCTAATCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000549585.1
ENST00000551310.1
CDS-3UTR CAA 90 bp TGTCTTCTGTTGAAGTCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTAGACCCAGTTTCAATTaGTTTCTTTACAATGCAGCT +
Preference number: 5 (lower is better)
Translates to: CLLLKSKDKNTSLSITICRPSFN*FLYNAA
Trigger: AGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCT...ACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTAGACCCAGTTTCAATTaGTTTCTTTACAATGCAGCT +
Preference number: 5 (lower is better)
Translates to: SKDKNTSLSITICEKTQFRPSFN*FLYNAA
Trigger: AGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCT...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp TCCAAAGACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTGACAAGAATACTAGCTaGTCCATCACAATATGTGAA +
Preference number: 5 (lower is better)
Translates to: SKDKNTSLSITICEKTQFDKNTS*SITICE
Trigger: TTCACATATTGTGATGGACAAGCTAGTATTCTTGTC...AAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS GCA 90 bp CTTGCAAGTACTCGAAGTTTTGGCCAAATCTTGTCTATCCTCTCTTaGTCAATCTATAAGTGTTTATCAAAGTTAAAATATGCCCAAACA +
Preference number: 5 (lower is better)
Translates to: LASTRSFGQILSILS*SIYKCLSKLKYAQT
Trigger: TGTTTGGGCATATTTTAACTTTGATAAACACTTATAGATTGAGCAAGAGAGGATAGACAAGATTTGGCCAAAACTTCGAGTACTTGCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551009.5
CDS-3UTR CAA 90 bp AAATCAACACCATCACGGTATCTCAGTTGGCTTACACGTGTAAAAAGAAATTTTAAAGACTACTACAAGTaGATAGAATGCATGACCCAA +
Preference number: 5 (lower is better)
Translates to: KSTPSRYLSWLTRVKRNFKDYYK*IECMTQ
Trigger: TTGGGTCATGCATTCTATCAACTTGTAGTAGTCTTT...AAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS-3UTR CAA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTAGACCCAGTTTCAATTaGTTTCTTTACAATGCAGCT +
Preference number: 5 (lower is better)
Translates to: DKNTSLSITICEKTQFQFRPSFN*FLYNAA
Trigger: AGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCT...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS-3UTR CAA 90 bp GACAAGAATACTAGCTTGTCCATCACAATATGTGAAAAGACCCAGTTTCAATTTGACAAGAATACTAGCTaGTCCATCACAATATGTGAA +
Preference number: 5 (lower is better)
Translates to: DKNTSLSITICEKTQFQFDKNTS*SITICE
Trigger: TTCACATATTGTGATGGACAAGCTAGTATTCTTGTC...AAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS TCA 72 bp TGGCTGGCGATGGAGGGTTGCCGCCTTAGAGCCCCCTaGATGGAACTTCCACTCTGGAAAGCATTCACTACA +
Preference number: 6 (lower is better)
Translates to: WLAMEGCRLRAP*MELPLWKAFTT
Trigger: TGTAGTGAATGCTTTCCAGAGTGGAAGTTCCATTCAGGGGGCTCTAAGGCGGCAACCCTCCATCGCCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000635033.1
CDS CCA 72 bp CATTCACCACTCGAATATCATGATGCTGGCTGGCGATaGAGGGTTGCCGCCTTAGAGCCCCCTGAATGGAAC +
Preference number: 6 (lower is better)
Translates to: HSPLEYHDAGWR*RVAALEPPEWN
Trigger: GTTCCATTCAGGGGGCTCTAAGGCGGCAACCCTCCATCGCCAGCCAGCATCATGATATTCGAGTGGTGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635033.1
CDS CCA 72 bp ACCATAAGGTTTCCGAAGCAAGAGAGACTCAGTGGGTaGTTCCGTTGCCAGAGCCAGGGAAGCGAGTGTATC +
Preference number: 6 (lower is better)
Translates to: TIRFPKQERLSG*FRCQSQGSECI
Trigger: GATACACTCGCTTCCCTGGCTCTGGCAACGGAACCACCCACTGAGTCTCTCTTGCTTCGGAAACCTTATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000551009.5
CDS CCA 72 bp TGGCGATGGAGGGTTGCCGCCTTAGAGCCCCCTGAATaGAACTTCCACTCTGGAAAGCATTCACTACATCCA +
Preference number: 6 (lower is better)
Translates to: WRWRVAALEPPE*NFHSGKHSLHP
Trigger: TGGATGTAGTGAATGCTTTCCAGAGTGGAAGTTCCATTCAGGGGGCTCTAAGGCGGCAACCCTCCATCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000635033.1
CDS CCA 72 bp GAAATGCATTCACCACTCGAATATCATGATGCTGGCTaGCGATGGAGGGTTGCCGCCTTAGAGCCCCCTGAA +
Preference number: 6 (lower is better)
Translates to: EMHSPLEYHDAG*RWRVAALEPPE
Trigger: TTCAGGGGGCTCTAAGGCGGCAACCCTCCATCGCCAGCCAGCATCATGATATTCGAGTGGTGAATGCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635033.1
CDS GCA 72 bp ATCTGTGGACCTGAGCTCCATGAGAGCCCGCAGCTCTaGGAGCGTAATTCCAAAGTCTCCATCATGATTAGC +
Preference number: 6 (lower is better)
Translates to: ICGPELHESPQL*ERNSKVSIMIS
Trigger: GCTAATCATGATGGAGACTTTGGAATTACGCTCGCAGAGCTGCGGGCTCTCATGGAGCTCAGGTCCACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000549585.1
ENST00000551310.1
CDS GCA 72 bp TTTCCGAAGCAAGAGAGACTCAGTGGGTGGTTCCGTTaGCAGAGCCAGGGAAGCGAGTGTATCCATTATGAG +
Preference number: 6 (lower is better)
Translates to: FPKQERLSGWFR*QSQGSECIHYE
Trigger: CTCATAATGGATACACTCGCTTCCCTGGCTCTGGCAACGGAACCACCCACTGAGTCTCTCTTGCTTCGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000551009.5
CDS TCA 72 bp CACAAGATTTGGCCACGCCGCAACTCCCTTTCAGCGTaGTCAATCTCTTCAACATCCTCTGCTAATTCCTCC +
Preference number: 6 (lower is better)
Translates to: HKIWPRRNSLSA*SISSTSSANSS
Trigger: GGAGGAATTAGCAGAGGATGTTGAAGAGATTGATCACGCTGAAAGGGAGTTGCGGCGTGGCCAAATCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000550716.1
ENST00000635033.1
CDS CCA 72 bp CTCCACCTTCTTCACTCTTCAATGGCTGCATTTCCATaGCTGCACCATCCTGGGCTTTTGCTTTGTTGCGAT +
Preference number: 6 (lower is better)
Translates to: LHLLHSSMAAFP*LHHPGLLLCCD
Trigger: ATCGCAACAAAGCAAAAGCCCAGGATGGTGCAGCCATGGAAATGCAGCCATTGAAGAGTGAAGAAGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS GCA 72 bp CCAGTAAGTCCTGTGGATTCTACCTCAAACTTGCCCTaGATCATGTCTCTGTTGCTTGTTGCCCAACCTACT +
Preference number: 6 (lower is better)
Translates to: PVSPVDSTSNLP*IMSLLLVAQPT
Trigger: AGTAGGTTGGGCAACAAGCAACAGAGACATGATGCAGGGCAAGTTTGAGGTAGAATCCACAGGACTTACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549727.1
CDS CAA 90 bp TCGAATCTGTGTTTGGATTCTGTTCAGACCTCTAAACCACAAGATTaGGCCACGCCGCAACTCCCTTTCAGCGTGATCAATCTCTTCAAC +
Preference number: 6 (lower is better)
Translates to: SNLCLDSVQTSKPQD*ATPQLPFSVINLFN
Trigger: GTTGAAGAGATTGATCACGCTGAAAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAGAGGTCTGAACAGAATCCAAACACAGATTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000393164.6
ENST00000428670.8
ENST00000550716.1
CDS CAA 90 bp ATCCATCTGTGTTTGGATTCTGTTCAGACCTCTAAACCACAAGATTaGGCCACGCCGCAACTCCCTTTCAGCGTGATCAATCTCTTCAAC +
Preference number: 6 (lower is better)
Translates to: IHLCLDSVQTSKPQD*ATPQLPFSVINLFN
Trigger: GTTGAAGAGATTGATCACGCTGAAAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAGAGGTCTGAACAGAATCCAAACACAGATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359142.7
ENST00000635033.1
CDS CAA 90 bp AGTCCTGTGGATTCTACCTCAAACTTGCCCTGCATCATGTCTCTGTaGCTTGTTGCCCAACCTACTGCAATGGCTTTTTATAAGGTACCC +
Preference number: 6 (lower is better)
Translates to: SPVDSTSNLPCIMSL*LVAQPTAMAFYKVP
Trigger: GGGTACCTTATAAAAAGCCATTGCAGTAGGTTGGGCAACAAGCAACAGAGACATGATGCAGGGCAAGTTTGAGGTAGAATCCACAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549727.1
CDS CAA 72 bp TGTTTGGATTCTGTTCAGACCTCTAAACCACAAGATTaGGCCACGCCGCAACTCCCTTTCAGCGTGATCAAT +
Preference number: 6 (lower is better)
Translates to: CLDSVQTSKPQD*ATPQLPFSVIN
Trigger: ATTGATCACGCTGAAAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAGAGGTCTGAACAGAATCCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000550716.1
ENST00000635033.1
CDS CAA 90 bp TGGATTCTACCTCAAACTTGCCCTGCATCATGTCTCTGTTGCTTGTaGCCCAACCTACTGCAATGGCTTTTTATAAGGTACCCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: WILPQTCPASCLCCL*PNLLQWLFIRYPAF
Trigger: AAAGGCAGGGTACCTTATAAAAAGCCATTGCAGTAGGTTGGGCAACAAGCAACAGAGACATGATGCAGGGCAAGTTTGAGGTAGAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549727.1
CDS TCA 72 bp AGTCCCAACAAGGCACATTCAGTTTTATTACCAACGTaGCGAGGTAATCCACCCTCTTTCTCTGGTGGCAAT +
Preference number: 6 (lower is better)
Translates to: SPNKAHSVLLPT*RGNPPSFSGGN
Trigger: ATTGCCACCAGAGAAAGAGGGTGGATTACCTCGTCACGTTGGTAATAAAACTGAATGTGCCTTGTTGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS CAA 72 bp CCTCAAACTTGCCCTGCATCATGTCTCTGTTGCTTGTaGCCCAACCTACTGCAATGGCTTTTTATAAGGTAC +
Preference number: 6 (lower is better)
Translates to: PQTCPASCLCCL*PNLLQWLFIRY
Trigger: GTACCTTATAAAAAGCCATTGCAGTAGGTTGGGCAACAAGCAACAGAGACATGATGCAGGGCAAGTTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549727.1
CDS TCA 72 bp GAACAATCAGAAACTCCTGGGAACTTGTTAGAAACGTaGATTCTTGGGCATGGACCCAGATCTATCTTAGCG +
Preference number: 6 (lower is better)
Translates to: EQSETPGNLLET*ILGHGPRSILA
Trigger: CGCTAAGATAGATCTGGGTCCATGCCCAAGAATTCACGTTTCTAACAAGTTCCCAGGAGTTTCTGATTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551009.5
CDS CCA 72 bp TCTCAAAGTGTGGTCCACAGAACAATCAGAAACTCCTaGGAACTTGTTAGAAACGTGAATTCTTGGGCATGG +
Preference number: 6 (lower is better)
Translates to: SQSVVHRTIRNS*ELVRNVNSWAW
Trigger: CCATGCCCAAGAATTCACGTTTCTAACAAGTTCCCAGGAGTTTCTGATTGTTCTGTGGACCACACTTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551009.5
CDS CAA 72 bp GATTCTACCTCAAACTTGCCCTGCATCATGTCTCTGTaGCTTGTTGCCCAACCTACTGCAATGGCTTTTTAT +
Preference number: 6 (lower is better)
Translates to: DSTSNLPCIMSL*LVAQPTAMAFY
Trigger: ATAAAAAGCCATTGCAGTAGGTTGGGCAACAAGCAACAGAGACATGATGCAGGGCAAGTTTGAGGTAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549727.1
CDS GCA 72 bp ATTCTACCTCAAACTTGCCCTGCATCATGTCTCTGTTaGTTGTTGCCCAACCTACTGCAATGGCTTTTTATA +
Preference number: 6 (lower is better)
Translates to: ILPQTCPASCLC*LLPNLLQWLFI
Trigger: TATAAAAAGCCATTGCAGTAGGTTGGGCAACAAGCAACAGAGACATGATGCAGGGCAAGTTTGAGGTAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549727.1
CDS CCA 72 bp CAGCAGCAACATTTCCCAGAGAAGTATCTTGACCTTTaGCCCATGACTAGTTTCTCCATATCAATCATGAGA +
Preference number: 6 (lower is better)
Translates to: QQQHFPEKYLDL*PMTSFSISIMR
Trigger: TCTCATGATTGATATGGAGAAACTAGTCATGGGCCAAAGGTCAAGATACTTCTCTGGGAAATGTTGCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359142.7
ENST00000428670.8
ENST00000551310.1
CDS CCA 72 bp AGCTATCTGGCATATTTATCAGTAGCTCTCAAAGTGTaGTCCACAGAACAATCAGAAACTCCTGGGAACTTG +
Preference number: 6 (lower is better)
Translates to: SYLAYLSVALKV*STEQSETPGNL
Trigger: CAAGTTCCCAGGAGTTTCTGATTGTTCTGTGGACCACACTTTGAGAGCTACTGATAAATATGCCAGATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551009.5
CDS GCA 72 bp ATCATTTTCATTATCCCACTCTGGTTCTGGTTCTCCTaGTGGAAAATCTCTGAATGCAAGACATATGGTTCT +
Preference number: 6 (lower is better)
Translates to: IIFIIPLWFWFS*WKISECKTYGS
Trigger: AGAACCATATGTCTTGCATTCAGAGATTTTCCAGCAGGAGAACCAGAACCAGAGTGGGATAATGAAAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS CCA 72 bp GTATTGTATATAAATTGGTGTGCACTCAGCAAGCCATaGTCTTTTCTGAACCCAGAAGGTGTCAATGACAAA +
Preference number: 6 (lower is better)
Translates to: VLYINWCALSKP*SFLNPEGVNDK
Trigger: TTTGTCATTGACACCTTCTGGGTTCAGAAAAGACCATGGCTTGCTGAGTGCACACCAATTTATATACAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS CAA 72 bp TGCAAACCTCTAAACTGTTTTTCCTTACTCCAGTCATaGAAAGCTGTTACTAACACCACACACACTACAGAC +
Preference number: 6 (lower is better)
Translates to: CKPLNCFSLLQS*KAVTNTTHTTD
Trigger: GTCTGTAGTGTGTGTGGTGTTAGTAACAGCTTTCAATGACTGGAGTAAGGAAAAACAGTTTAGAGGTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS TCA 72 bp TTCCTTCAAAGAGTTTTTCACACCACTGTAAGCAACTaGGTTGTTTGCCATGTCGCCCATTACAAGTATAAT +
Preference number: 6 (lower is better)
Translates to: FLQRVFHTTVSN*VVCHVAHYKYN
Trigger: ATTATACTTGTAATGGGCGACATGGCAAACAACTCAGTTGCTTACAGTGGTGTGAAAAACTCTTTGAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000549585.1
ENST00000551310.1
CDS TCA 72 bp ATCTCTGAATGCAAGACATATGGTTCTCAAGCCTTCTaGTGCCATCGGTTCAATCACAGTTTTTACAATATC +
Preference number: 6 (lower is better)
Translates to: ISECKTYGSQAF*CHRFNHSFYNI
Trigger: GATATTGTAAAAACTGTGATTGAACCGATGGCATCAGAAGGCTTGAGAACCATATGTCTTGCATTCAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS GCA 72 bp TACAATATCATCACGGTCCCTTGGTCTGAATACTTTTaGCTCACCATTAGCACTCAAGATTTTGAAACACTT +
Preference number: 6 (lower is better)
Translates to: YNIITVPWSEYF*LTISTQDFETL
Trigger: AAGTGTTTCAAAATCTTGAGTGCTAATGGTGAGGCAAAAGTATTCAGACCAAGGGACCGTGATGATATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS CCA 72 bp TTTAAGATCGTTGCCTTGAATAAGTATGCCGTCAGCTaGAAGAAGATCACCATATTTCACTTGAGCAATATC +
Preference number: 6 (lower is better)
Translates to: FKIVALNKYAVS*KKITIFHLSNI
Trigger: GATATTGCTCAAGTGAAATATGGTGATCTTCTTCCAGCTGACGGCATACTTATTCAAGGCAACGATCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
CDS CCA 72 bp TTCAATCACAGTTTTTACAATATCATCACGGTCCCTTaGTCTGAATACTTTTGCCTCACCATTAGCACTCAA +
Preference number: 6 (lower is better)
Translates to: FNHSFYNIITVP*SEYFCLTISTQ
Trigger: TTGAGTGCTAATGGTGAGGCAAAAGTATTCAGACCAAGGGACCGTGATGATATTGTAAAAACTGTGATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
CDS CCA 72 bp TTCCACTTAAACCTTCATTGGGAGATGTTTTCAATTTaGTGCAAATTCCATAGACATCTCCATAGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: FHLNLHWEMFSI*CKFHRHLHSFP
Trigger: AGGAAAGCTATGGAGATGTCTATGGAATTTGCACCAAATTGAAAACATCTCCCAATGAAGGTTTAAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000428670.8
ENST00000549585.1
CDS GCA 72 bp GAAAGTTCTGAACAACTGAAAGGTTTTCCACCAAACTaGACAATTATTATCTGTACCACAAAAGTGCCTAAA +
Preference number: 6 (lower is better)
Translates to: ESSEQLKGFPPN*TIIICTTKVPK
Trigger: TTTAGGCACTTTTGTGGTACAGATAATAATTGTGCAGTTTGGTGGAAAACCTTTCAGTTGTTCAGAACTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8
ENST00000635033.1
CDS TCA 72 bp AACACTTTTTCAGAATTATCTCAGATGCACCCTTGCTaGATATTCGATAACTTCCATCTGAATTTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: NTFSELSQMHPC*IFDNFHLNFSG
Trigger: TCCTGAAAAATTCAGATGGAAGTTATCGAATATTCAGCAAGGGTGCATCTGAGATAATTCTGAAAAAGTGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261173.6
ENST00000359142.7
ENST00000393164.6
ENST00000428670.8