RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000074370

Ensembl transcript IDs: ENST00000309890.11, ENST00000352011.7, ENST00000359983.7, ENST00000397035.7, ENST00000397041.8, ENST00000397043.7, ENST00000570773.5, ENST00000570845.5, ENST00000571245.5, ENST00000572116.1, ENST00000572176.1, ENST00000572694.1, ENST00000574202.1, ENST00000574999.1, ENST00000576957.1

Found 970 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGAGCTCAGGACGGGGAACCCTGAGTCCAGGAGGCGCGCGGGGCTaGGGCAGTCCAGCCAGGCTTTCCCGACTTGTCTCCCGGGAAAGG +
Preference number: 1 (lower is better)
Translates to: PSSGRGTLSPGGARG*GSPARLSRLVSRER
Trigger: CCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGACTGCCTCAGCCCCGCGCGCCTCCTGGACTCAGGGTTCCCCGTCCTGAGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR CCA 90 bp AGAGGCCCCCAGCTGTGCAGACAGCGCGGCGGCCGCACACTGGGCTaGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCGGTGGT +
Preference number: 1 (lower is better)
Translates to: RGPQLCRQRGGRTLG*VEGRHGQEPEDVGG
Trigger: ACCACCGACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAGCTGGGGGCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR TCA 90 bp ACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTaGCCCTTCACCCGCCCGGGCCCGGAGACTCCACTCTGTTCCCAG +
Preference number: 1 (lower is better)
Translates to: TSSLRPPAGSLCPSL*PFTRPGPETPLCSQ
Trigger: CTGGGAACAGAGTGGAGTCTCCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397035.7
3UTR TCA 90 bp GCTGCCCACCCTCGCTGTACACAGCTGGGCCCAGATGGCCCCTTCTaGTCCCCCAGGGCTGACCCAGTCCCAGACCAGGCACGAAGAGAG +
Preference number: 1 (lower is better)
Translates to: AAHPRCTQLGPDGPF*SPRADPVPDQARRE
Trigger: CTCTCTTCGTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAGGGTGGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR TCA 90 bp CGGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTaGGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGT +
Preference number: 1 (lower is better)
Translates to: RPHTGLGRRAPRSGT*GCRWSQVPGTRVAS
Trigger: ACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR TCA 90 bp CTGTACACAGCTGGGCCCAGATGGCCCCTTCTGATCCCCCAGGGCTaGCCCAGTCCCAGACCAGGCACGAAGAGAGAGGTCAGAGCCGGT +
Preference number: 1 (lower is better)
Translates to: LYTAGPRWPLLIPQG*PSPRPGTKREVRAG
Trigger: ACCGGCTCTGACCTCTCTCTTCGTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTGGGCCCAGCTGTGTACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR CCA 90 bp CAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTaGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACT +
Preference number: 1 (lower is better)
Translates to: QEPEDVGGLRYQGRG*QVGPLRGRPGGSVT
Trigger: AGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR TCA 90 bp ACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTaGCCCTTCACCCGCCCGGGCCCTGCACATATAAACAGAAGCAGC +
Preference number: 1 (lower is better)
Translates to: TSSLRPPAGSLCPSL*PFTRPGPAHINRSS
Trigger: GCTGCTTCTGTTTATATGTGCAGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR CCA 90 bp TGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTaGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCA +
Preference number: 1 (lower is better)
Translates to: WSQVPGTRVASWTSA*QTGRQCDSEHLPSS
Trigger: TGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR TCA 90 bp GGACCCCCAGAGTCCTCCGTCAGTGCAGAGGCACCAGTCACCAAGTaGACGTCCAGCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCAC +
Preference number: 1 (lower is better)
Translates to: GPPESSVSAEAPVTK*TSSFRTRGSKLQLH
Trigger: GTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGCCTCTGCACTGACGGAGGACTCTGGGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR GCA 90 bp GAGAGGTCAGAGCCGGTAAGAAGGACCCCCAGAGTCCTCCGTCAGTaGAGAGGCACCAGTCACCAAGTGAACGTCCAGCTTCCGAACAAG +
Preference number: 1 (lower is better)
Translates to: ERSEPVRRTPRVLRQ*RGTSHQVNVQLPNK
Trigger: CTTGTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGCCTCTGCACTGACGGAGGACTCTGGGGGTCCTTCTTACCGGCTCTGACCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR CAA 90 bp CAGGAGGCGCGCGGGGCTGAGGCAGTCCAGCCAGGCTTTCCCGACTaGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTCCTGCCGGCT +
Preference number: 2 (lower is better)
Translates to: QEARGAEAVQPGFPD*SPGKGHPRSALLPA
Trigger: AGCCGGCAGGAGGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGACTGCCTCAGCCCCGCGCGCCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR CCA 90 bp CTGTGCAGACAGCGCGGCGGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTGACCCGGTGGGCAAGTaGGCGAGTGTGGTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: LCRQRGGRTLGWVEGRHGDPVGK*ASVVAR
Trigger: CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTC...ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR CCA 90 bp AGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCGACCCGGTGGGCAAGTaGGCGAGTGTGGTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: RYQGRGWQVGPLRGRPGGDPVGK*ASVVAR
Trigger: CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTC...GCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR TCA 90 bp GGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCCTGATCCCCCAGGGCTaGCCCAGTCCCAGACCAGGC +
Preference number: 2 (lower is better)
Translates to: GRTLGWVEGRHGQEPEDVLIPQG*PSPRPG
Trigger: GCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCAG...GACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR GCA 90 bp CTGTGCAGACAGCGCGGCGGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCTCCTGGGCCAGAGCTaGAGAGCAGGGAACTTCCCA +
Preference number: 2 (lower is better)
Translates to: LCRQRGGRTLGWVEGRHGLLGQS*RAGNFP
Trigger: TGGGAAGTTCCCTGCTCTGCAGCTCTGGCCCAGGAG...ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR GCA 90 bp ACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCCTCGCTCCGCCCTCCTaGCGGCTCCTTGTGTCCGTC +
Preference number: 2 (lower is better)
Translates to: TVRNLRMSVVSGTRDAGGLAPPS*RLLVSV
Trigger: GACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAG...GCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR TCA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAACCAGATGGCCCCTTCTaGTCCCCCAGGGCTGACCCA +
Preference number: 2 (lower is better)
Translates to: GRPGGSVTLNISRAQDGEPDGPF*SPRADP
Trigger: TGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTGG...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR TCA 90 bp TTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAAGACAGGACGGGGAACCCTaGGTCCAGGAGGCGCGCGGG +
Preference number: 2 (lower is better)
Translates to: FSTKQQVSRWVQGPLLLRQDGEP*VQEARG
Trigger: CCCGCGCGCCTCCTGGACTCAGGGTTCCCCGTCCTG...TCTTAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR GCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTAGAGGCCCCCAGCTGTaGAGACAGCGCGGCGGCCGC +
Preference number: 2 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPRGPQL*RQRGGR
Trigger: GCGGCCGCCGCGCTGTCTGCACAGCTGGGGGCCTCT...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR CCA 90 bp AATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGTGGGGAGGGGGTCCGGCGGGACCCGGTaGGCAAGTGGGCGAGTGTGG +
Preference number: 2 (lower is better)
Translates to: NQPSLVTSFRLMGVVGRGSGGTR*ASGRVW
Trigger: CCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGA...CCCCCTCCCCACGACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR TCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGCGGGGATGGCCATTCTaGCCTCGGGCCTGTCATTTA +
Preference number: 2 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRRGWPF*PRACHL
Trigger: TAAATGACAGGCCCGAGGTCAGAATGGCCATCCCCG...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR CCA 90 bp TTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAAGAGGGGCCCCGGATCTCTaGGTATGCTGCCAGCTCCGG +
Preference number: 2 (lower is better)
Translates to: FSTKQQVSRWVQGPLLLRGAPDL*VCCQLR
Trigger: CCGGAGCTGGCAGCATACCCAGAGATCCGGGGCCCC...TCTTAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR CCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGGGGCCCCGGATCTCTaGGTATGCTGCCAGCTCCGG +
Preference number: 2 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVGAPDL*VCCQLR
Trigger: CCGGAGCTGGCAGCATACCCAGAGATCCGGGGCCCC...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR TCA 90 bp CGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAACCCTGAGTCCATGGGCACCATCAGTCTaGGGTACACACCGGAGACTC +
Preference number: 2 (lower is better)
Translates to: RQCDSEHLPSSGRGTLSPWAPSV*GTHRRL
Trigger: GAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCA...TGGACTCAGGGTTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR GCA 90 bp TCAGTCTGCACACGCTCTAGGAGTGGCCAAGACATAGGGACAATCCTTGGTGCACTCCGGCTTCTTGGCTaGCCCCTCCCAGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: SVCTRSRSGQDIGTILGALRLLG*PLPACS
Trigger: GCTGCAGGCTGGGAGGGGGCAGCCAAGAAGCCGGAG...TGCACCAAGGATTGTCCCTATGTCTTGGCCACTCCTAGAGCGTGTGCAGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR GCA 90 bp TGCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCCTCCGGCTTCTTGGCTaGCCCCTCCCAGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: CTYKQKQPRALGSRLCGSLRLLG*PLPACS
Trigger: GCTGCAGGCTGGGAGGGGGCAGCCAAGAAGCCGGAG...GCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR CCA 90 bp TTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAAGAAGTTGGACCTCTGCGTaGCAGACCGGGCGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: FSTKQQVSRWVQGPLLLRSWTSA*QTGRQC
Trigger: ACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT...TCTTAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR CCA 90 bp CAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAAGGGATGTGAGTCTACGCGGGTGGCAAGTTaGACCTCTGCGTGGCAGACC +
Preference number: 2 (lower is better)
Translates to: QGRLRGFGCGGLGKGCESTRVAS*TSAWQT
Trigger: GGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGT...AGACTCACATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR TCA 90 bp GTCCTCCGTCAGTGCAGAGGCACCAGTCACCAAGTGAACGTCCAGCTTCCGAACTGGGCACCATCAGTCTaGGGTACACACCGGAGACTC +
Preference number: 2 (lower is better)
Translates to: VLRQCRGTSHQVNVQLPNWAPSV*GTHRRL
Trigger: GAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCA...GTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGCCTCTGCACTGACGGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR GCA 90 bp AACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCGGCAAGTTGGACCTCTaGGTGGCAGACCGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: NLYFSTKQQVSRWVQGPLGKLDL*VADRAA
Trigger: TGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCC...GAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR CCA 90 bp TATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAACGCGGGTGGCAAGTTaGACCTCTGCGTGGCAGACC +
Preference number: 2 (lower is better)
Translates to: YFSTKQQVSRWVQGPLLLTRVAS*TSAWQT
Trigger: GGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGT...TAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR GCA 90 bp ACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGAGAGTCCTCCGTCAGTaGAGAGGCACCAGTCACCAA +
Preference number: 2 (lower is better)
Translates to: TEAASSSREPTLWKQSGVRVLRQ*RGTSHQ
Trigger: TTGGTGACTGGTGCCTCTGCACTGACGGAGGACTCT...CACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR GCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGATCTCTGGGTATGCTaGCAGCTCCGGCTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVDLWVC*QLRLLG
Trigger: GCCAAGAAGCCGGAGCTGGCAGCATACCCAGAGATC...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR GCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGATAAAATCATCAGTCTaGACACGCTCTAGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRIKSSV*TRSRSG
Trigger: GCCACTCCTAGAGCGTGTGCAGACTGATGATTTTAT...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR CCA 90 bp TGCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCCTCGCTGTACACAGCTaGGCCCAGATGGCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: CTYKQKQPRALGSRLCGSLAVHS*AQMAPS
Trigger: AGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAG...GCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR CCA 90 bp AACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCTACCAGGGACGCGGGTaGCAAGTTGGACCTCTGCGT +
Preference number: 2 (lower is better)
Translates to: NLYFSTKQQVSRWVQGPLYQGRG*QVGPLR
Trigger: ACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA...GAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR GCA 90 bp GGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGGAGCAAGCTCCAGCTaGACTCGTGATTTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: GTILGAGFCYPSLVFAKVGASSS*TRDLGV
Trigger: CACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCC...TACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR GCA 90 bp ACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAAGAGTCCTCCGTCAGTaGAGAGGCACCAGTCACCAA +
Preference number: 2 (lower is better)
Translates to: TYKQKQPRALGSRLCGSRRVLRQ*RGTSHQ
Trigger: TTGGTGACTGGTGCCTCTGCACTGACGGAGGACTCT...TCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR GCA 90 bp CTTGATTTACATATAAAATCATCAGTCTGCACACGCTCTAGGAGTGGCCAAGACGGCAAGTTGGACCTCTaGGTGGCAGACCGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: LDLHIKSSVCTRSRSGQDGKLDL*VADRAA
Trigger: TGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCC...GTCTTGGCCACTCCTAGAGCGTGTGCAGACTGATGATTTTATATGTAAATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR TCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGTTGTGTCCGTCTCTCTaGCCCTTCACCCGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMLCPSL*PFTRPG
Trigger: GCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAA...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR CCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGTACCAGGGACGCGGGTaGCAAGTTGGACCTCTGCGT +
Preference number: 2 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMYQGRG*QVGPLR
Trigger: ACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR-3UTR CCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGCGGGAGCCGACTTTGTaGAAGCAGAGTGGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMREPTL*KQSGVE
Trigger: CTCCACTCCACTCTGCTTCCACAAAGTCGGCTCCCG...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR TCA 72 bp CTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTaGCCCTTCACCCGCCCGGGCCCGGAGACTCCACTC +
Preference number: 3 (lower is better)
Translates to: LRPPAGSLCPSL*PFTRPGPETPL
Trigger: GAGTGGAGTCTCCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397035.7
3UTR CCA 72 bp CGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTaGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGAC +
Preference number: 3 (lower is better)
Translates to: RWSQVPGTRVAS*TSAWQTGRQCD
Trigger: GTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR CCA 72 bp GAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTaGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGC +
Preference number: 3 (lower is better)
Translates to: EDVGGLRYQGRG*QVGPLRGRPGG
Trigger: GCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR CCA 72 bp CAGCTGTGCAGACAGCGCGGCGGCCGCACACTGGGCTaGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGAT +
Preference number: 3 (lower is better)
Translates to: QLCRQRGGRTLG*VEGRHGQEPED
Trigger: ATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR TCA 72 bp CTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTaGCCCTTCACCCGCCCGGGCCCTGCACATATAAAC +
Preference number: 3 (lower is better)
Translates to: LRPPAGSLCPSL*PFTRPGPAHIN
Trigger: GTTTATATGTGCAGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR TCA 72 bp ACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTaGGGATGTCGGTGGTCTCAGGTACCAGGGACGCGG +
Preference number: 3 (lower is better)
Translates to: TGLGRRAPRSGT*GCRWSQVPGTR
Trigger: CCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR CCA 72 bp GTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTaGCAGACCGGGCGGCAGTGTGACTCTGAACATCTC +
Preference number: 3 (lower is better)
Translates to: VPGTRVASWTSA*QTGRQCDSEHL
Trigger: GAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR GCA 72 bp GAGCCGGTAAGAAGGACCCCCAGAGTCCTCCGTCAGTaGAGAGGCACCAGTCACCAAGTGAACGTCCAGCTT +
Preference number: 3 (lower is better)
Translates to: EPVRRTPRVLRQ*RGTSHQVNVQL
Trigger: AAGCTGGACGTTCACTTGGTGACTGGTGCCTCTGCACTGACGGAGGACTCTGGGGGTCCTTCTTACCGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR-3UTR CAA 90 bp AATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGTGGGGAGGGGGTCTCGGGAGCCGACTTaGTGGAAGCAGAGTGGAGTG +
Preference number: 3 (lower is better)
Translates to: NQPSLVTSFRLMGVVGRGSREPT*WKQSGV
Trigger: CACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGA...CCCCCTCCCCACGACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
3UTR TCA 72 bp AAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTaGTATGACGTGTTCCTCCAGCAGGGAGGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: KILSIRGHLPLI*YDVFLQQGGRE
Trigger: CTCCCTCCCTCCCTGCTGGAGGAACACGTCATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR GCA 72 bp GGCCAAGACATAGGGACAATCCTTGGTGCAGGTTTCTaGTACCCCTCGCTAGTTTTTGCCAAAGTAGCAAAA +
Preference number: 3 (lower is better)
Translates to: GQDIGTILGAGF*YPSLVFAKVAK
Trigger: TTTTGCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATGTCTTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
3UTR TCA 72 bp TTTGGATGTGGGGGACTAGGAAAGGGATGTGAGTCTTaGTTTACATATAAAATCATCAGTCTGCACACGCTC +
Preference number: 3 (lower is better)
Translates to: FGCGGLGKGCES*FTYKIISLHTL
Trigger: GAGCGTGTGCAGACTGATGATTTTATATGTAAATCAAGACTCACATCCCTTTCCTAGTCCCCCACATCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTTCACCCGCCCGGGCCCGGCCGCAGCGCACAGGCTaGTCCCCCTGCCGCACTTCG +
Preference number: 4 (lower is better)
Translates to: LLPAPCVRLSDPSPARARPQRTG*SPCRTS
Trigger: CGAAGTGCGGCAGGGGGATCAGCCTGTGCGCTGCGG...CCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR GCA 90 bp AGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCTTGCCCAGCTCCGTGTaGAGGCCGGTGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: RYQGRGWQVGPLRGRPGGLPSSV*RPVATA
Trigger: GGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAA...GCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTTCACCCGCCCGGGCCCGGCTCGCTCCGCCCTCCTaGCGGCTCCTTGTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: LLPAPCVRLSDPSPARARLAPPS*RLLVSV
Trigger: GACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAG...CCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR GCA 90 bp GGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTAGAGGCCCCCAGCTGTaGAGACAGCGCGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GRGWQVGPLRGRPGGSVTRGPQL*RQRGGR
Trigger: GCGGCCGCCGCGCTGTCTGCACAGCTGGGGGCCTCT...AGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp TCCAGCCAGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCCCCTGGCCAGTAGGGTaGGGGCGGGTGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSQAFPTCLPGKDILAPPPWPVG*GRVGVQ
Trigger: CTGCACGCCCACCCGCCCTCACCCTACTGGCCAGGG...GGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAACCCTGGCCAGTAGGGTaGGGGCGGGTGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQPWPVG*GRVGVQ
Trigger: CTGCACGCCCACCCGCCCTCACCCTACTGGCCAGGG...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CCTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGCCCTGGCCAGTAGGGTaGGGGCGGGTGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: PPPLRFSHWPPRTCEREEPWPVG*GRVGVQ
Trigger: CTGCACGCCCACCCGCCCTCACCCTACTGGCCAGGG...CTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CGGGCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCCAGGTCTGGCGGGTTaGAGCCCAGAGCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RACHLSGGTRWASGRVWWPGLAG*SPEPWQ
Trigger: CTGCCACGGCTCTGGGCTTCAACCCGCCAGACCTGG...CCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGCAGGACGGGGAACCCTaGGTCCAGGAGGCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVQDGEP*VQEARG
Trigger: CCCGCGCGCCTCCTGGACTCAGGGTTCCCCGTCCTG...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGTCGTCCAGCTTGCGCTaGAGCGGCGTCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGSSSLR*SGVRSG
Trigger: GCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGA...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCGGCAGGCCTGGCGCTaGTGCTCGGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGRQAWR*CSGLRS
Trigger: TGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTGCCG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp AGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCCCCTGCCTCCCCCACTaGGTTTCTCTCACTGGCCGC +
Preference number: 4 (lower is better)
Translates to: RYQGRGWQVGPLRGRPGGPCLPH*VSLTGR
Trigger: GCGGCCAGTGAGAGAAACGCAGTGGGGGAGGCAGGG...GCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGGCTGTCACCGAGAAGTaGCGCAGCACGTCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGAVTEK*RSTSAA
Trigger: GGCCGCCGACGTGCTGCGCCACTTCTCGGTGACAGC...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCACTCGGGAGCTCGTTaGGGCCGTAGCGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGHSGAR*GRSAPA
Trigger: CGCGGGAGCGCTACGGCCCCAACGAGCTCCCGAGTG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGCCGTGTGCAGGCCGGTaGCCACGGCCACACCCACCG +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKPCAGR*PRPHPP
Trigger: CGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGG...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGGCCGCACACTGGGCTaGGTAGAAGGGCGCCACGGT +
Preference number: 4 (lower is better)
Translates to: YQGRGWQVGPLRGRPGGSGRTLG*VEGRHG
Trigger: ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC...ACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGCCGCAGCGCACAGGCTaGTCCCCCTGCCGCACTTCG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARPQRTG*SPCRTS
Trigger: CGAAGTGCGGCAGGGGGATCAGCCTGTGCGCTGCGG...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGCCGCAGCGCACAGGCTaGTCCCCCTGCCGCACTTCG +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKPQRTG*SPCRTS
Trigger: CGAAGTGCGGCAGGGGGATCAGCCTGTGCGCTGCGG...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp ACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCCCGCAGCGCACAGGCTaGTCCCCCTGCCGCACTTCG +
Preference number: 4 (lower is better)
Translates to: TVRNLRMSVVSGTRDAGGPQRTG*SPCRTS
Trigger: CGAAGTGCGGCAGGGGGATCAGCCTGTGCGCTGCGG...GCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGGGCCACGGCCGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGGHGRA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACGGCCGTGGCC...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCCAGGTCTGGCGGGTTaGAGCCCAGAGCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGPGLAG*SPEPWQ
Trigger: CTGCCACGGCTCTGGGCTTCAACCCGCCAGACCTGG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGCGCCACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGCCAGGTCTGGCGGGTTaGAGCCCAGAGCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GATVRNLRMSVVSGTRDAPGLAG*SPEPWQ
Trigger: CTGCCACGGCTCTGGGCTTCAACCCGCCAGACCTGG...CGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CCTTCACCCGCCCGGGCCCGGAGACTCCACTCTGTTCCCAGCGCTCACTTCTGGGCGGCACGAGCAGGATaGGGAAGTGCAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PSPARARRLHSVPSAHFWAARAG*GSAGPW
Trigger: CCATGGCCCTGCACTTCCTCATCCTGCTCGTGCCGC...CCAGAAGTGAGCGCTGGGAACAGAGTGGAGTCTCCGGGCCCGGGCGGGTGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR TCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGTTGTGTCCGTCTCTCTaGCCCTTCACCCGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGLCPSL*PFTRPG
Trigger: GCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAA...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GCCCAGATGGCCCCTTCTGATCCCCCAGGGCTGACCCAGTCCCAGACCAGGCACGCGAGGCCATGTCCGTaGTGGGACCTTACCCGACGG +
Preference number: 4 (lower is better)
Translates to: AQMAPSDPPGLTQSQTRHARPCP*WDLTRR
Trigger: CCGTCGGGTAAGGTCCCAGCACGGACATGGCCTCGC...GTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTTTGCCCAGCTCCGTGTaGAGGCCGGTGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGLPSSV*RPVATA
Trigger: GGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAA...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGTTGCCCAGCTCCGTGTaGAGGCCGGTGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARLPSSV*RPVATA
Trigger: GGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAA...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TCCAGCCAGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTTGCCCAGCTCCGTGTaGAGGCCGGTGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SSQAFPTCLPGKDILAPPLPSSV*RPVATA
Trigger: GGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAA...GGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGCCGCTCGGGCTCGACTaGCGCCATCTGGCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWPLGLD*RHLAPD
Trigger: ATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGG...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGTCGTCCAGCTTGCGCTaGAGCGGCGTCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVSSSLR*SGVRSG
Trigger: GCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGA...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGTCGTCCAGCTTGCGCTaGAGCGGCGTCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRSSSLR*SGVRSG
Trigger: GCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGA...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGGCACGATGGCGTTCTTaGGTGCCATGCGCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGARWRS*VPCAAC
Trigger: GCACGCGGCGCATGGCACGCAAGAACGCCATCGTGC...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCAGGCCTGGCGCTGCTaGTCGGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTG...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAACGGCAGGCCTGGCGCTaGTGCTCGGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQRQAWR*CSGLRS
Trigger: TGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTGCCG...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAACGGCAGGCCTGGCGCTaGTGCTCGGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GRPGGSVTLNISRAQDGERQAWR*CSGLRS
Trigger: TGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTGCCG...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGCACTCGGGAGCTCGTTaGGGCCGTAGCGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARHSGAR*GRSAPA
Trigger: CGCGGGAGCGCTACGGCCCCAACGAGCTCCCGAGTG...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACAGCCAGGAGCCACCGTaGGCCGGGTCGGCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VVSGTRDAGGKLDLCVADSQEPP*AGSAKW
Trigger: CCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCT...GTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTAGCCAGGAGCCACCGTaGGCCGGGTCGGCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGSQEPP*AGSAKW
Trigger: CCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCT...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCATGTCCTCCTTCCTTaGGGGCGCGTCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGHVLLP*GRVPGG
Trigger: GCCACCCGGGACGCGCCCCCAAGGAAGGAGGACATG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTTGTGTCCGTCTCTCTGACCCTTCACCCGCCCGGGCCCGGAGACTCCACTCTGCATGTCCTCCTTCCTTaGGGGCGCGTCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LVSVSLTLHPPGPGDSTLHVLLP*GRVPGG
Trigger: GCCACCCGGGACGCGCCCCCAAGGAAGGAGGACATG...CAGAGTGGAGTCTCCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGTCTCTGCCGCCGACTTaGCCACGGCCGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWSLPPT*PRPCLS
Trigger: GCTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGA...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTGCAGACAGCGCGGCGGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCTGGCGCCCGCTCAGTaGGGTCACCTGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: LCRQRGGRTLGWVEGRHGLAPAQ*GHLENE
Trigger: CTCATTTTCCAGGTGACCCCACTGAGCGGGCGCCAG...ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGGGGCTGCCCACCCTCGCTGTACACAGCTGGGCCCAGATGGCCCCTTCTGATAGCACCACCACCCACTaGCGCCCGCTCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RGLPTLAVHSWAQMAPSDSTTTH*RPLSGV
Trigger: GACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCT...ATCAGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAGGGTGGGCAGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGAGCACCACCACCCACTaGCGCCCGCTCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGSTTTH*RPLSGV
Trigger: GACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCT...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGGACCCGGTGGGCAAGTaGGCGAGTGTGGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGDPVGK*ASVVAR
Trigger: CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTC...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGTCCGGCGGGACCCGGTaGGCAAGTGGGCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARSGGTR*ASGRVW
Trigger: CCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGA...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTCCGGCGGGACCCGGTaGGCAAGTGGGCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGSGGTR*ASGRVW
Trigger: CCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGA...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
3UTR CAA 72 bp CGCGGGGCTGAGGCAGTCCAGCCAGGCTTTCCCGACTaGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: RGAEAVQPGFPD*SPGKGHPRSAL
Trigger: GAGGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGACTGCCTCAGCCCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCCCGCAGCGCACAGGCTaGTCCCCCTGCCGCACTTCG +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSPQRTG*SPCRTS
Trigger: CGAAGTGCGGCAGGGGGATCAGCCTGTGCGCTGCGG...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCTCCCCACGCGGACTaGGCTACAGCGCTCGATCAC +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWAPHAD*ATALDH
Trigger: GTGATCGAGCGCTGTAGCTCAGTCCGCGTGGGGAGC...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCTGCTGCTCGGGGCTaGGGTCATCAAACTCGCGGC +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGAAARG*GHQTRG
Trigger: GCCGCGAGTTTGATGACCTCAGCCCCGAGCAGCAGC...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp AGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGGGCCACGGCCGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: SWTSAWQTGRQCDSEHLPGHGRA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACGGCCGTGGCC...CGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCCAGGTCTGGCGGGTTaGAGCCCAGAGCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGPGLAG*SPEPWQ
Trigger: CTGCCACGGCTCTGGGCTTCAACCCGCCAGACCTGG...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCTTGTGTCCGTCTCTCTaGCCCTTCACCCGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GRTLGWVEGRHGQEPEDVLCPSL*PFTRPG
Trigger: GCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAA...GACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp TACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTCTGCAAGGCAGGCTaGGGGGCTTTGGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: YQGRGWQVGPLRGRPGGSVCKAG*GALDVG
Trigger: CCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGAC...ACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGTGGCACTCTCGGCGTTaGGTTCCTGCCACACGCCCA +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGWHSRR*VPATRP
Trigger: TGGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCA...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAACGGGCACGGATCCTCTaGACGCCCTTGCGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQRARIL*TPLRSE
Trigger: CTCGGACCGCAAGGGCGTGCAGAGGATCCGTGCCCG...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGCGGGCACGGATCCTCTaGACGCCCTTGCGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRRARIL*TPLRSE
Trigger: CTCGGACCGCAAGGGCGTGCAGAGGATCCGTGCCCG...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGGCGCCGCGTGCCCAGTaGCAGGCATGTAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGAPRAQ*QACSDD
Trigger: GTCATCACTACATGCCTGGCACTGGGCACGCGGCGC...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTCGTTCTTGCGTGCCATaGGCCGCGTGCCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GHPRSALLPAPCVRLSDPRSCVP*AACPVP
Trigger: TGGCACTGGGCACGCGGCGCATGGCACGCAAGAACG...AGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCCAGAGCCGAGTCGTTaGACAGGGCGCAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGPEPSR*TGRRWS
Trigger: CGACCATCTGCGCCCTGTGCAACGACTCGGCTCTGG...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGCGGCGGGTCCAGCATaGCTACGCAGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKAAGPA*LRSPRR
Trigger: CCTTCGTGGGCTGCGTAGGCATGCTGGACCCGCCGC...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCCCGTGTAGGCCTTaGCCGCCACGTCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWGPCRP*PPRLPC
Trigger: ACACGGAAGACGTGGCGGGCAAGGCCTACACGGGCC...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTTGTGTCCGTCTCTCTGACCCTTCACCCGCCCGGGCCCGGAGACTCCACTCTGGGCCCGTGTAGGCCTTaGCCGCCACGTCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LVSVSLTLHPPGPGDSTLGPCRP*PPRLPC
Trigger: ACACGGAAGACGTGGCGGGCAAGGCCTACACGGGCC...CAGAGTGGAGTCTCCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR GCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCAGGCCTGGCGCTGCTaGTCGGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTGATGCGGGACTTGTGTaGGGGCTCCACGCGGGCGAA +
Preference number: 4 (lower is better)
Translates to: GHPRSALLPAPCVRLSDPDAGLV*GLHAGE
Trigger: TTCGCCCGCGTGGAGCCCGCACACAAGTCCCGCATC...AGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGATGCGGGACTTGTGTaGGGGCTCCACGCGGGCGAA +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWDAGLV*GLHAGE
Trigger: TTCGCCCGCGTGGAGCCCGCACACAAGTCCCGCATC...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TCCAGCCAGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCCTCCGGCTTCTTGGCTaGCCCCTCCCAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSQAFPTCLPGKDILAPPLRLLG*PLPACS
Trigger: GCTGCAGGCTGGGAGGGGGCAGCCAAGAAGCCGGAG...GGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GGACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTGGCAAGTTGGACCTCTaGGTGGCAGACCGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GHPRSALLPAPCVRLSDPGKLDL*VADRAA
Trigger: TGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCC...AGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CAGCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCACTCGTGATTTGGGGGTGGCCGTGTGCAGGCCGGTaGCCACGGCCACACCCACCG +
Preference number: 4 (lower is better)
Translates to: QLPNKGEQAPAALVIWGWPCAGR*PRPHPP
Trigger: CGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGG...CCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTCCGTGTGCAGGCCGGTaGCCACGGCCACACCCACCG +
Preference number: 4 (lower is better)
Translates to: HGAHWSARQAEGLWMWGTPCAGR*PRPHPP
Trigger: CGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGG...AGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACCGTGTGCAGGCCGGTaGCCACGGCCACACCCACCG +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPPCAGR*PRPHPP
Trigger: CGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGG...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CCTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGCATGTCCTCCTTCCTTaGGGGCGCGTCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPPLRFSHWPPRTCEREEHVLLP*GRVPGG
Trigger: GCCACCCGGGACGCGCCCCCAAGGAAGGAGGACATG...CTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAACATGTCCTCCTTCCTTaGGGGCGCGTCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQHVLLP*GRVPGG
Trigger: GCCACCCGGGACGCGCCCCCAAGGAAGGAGGACATG...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGAGCACCACCACCCACTaGCGCCCGCTCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARSTTTH*RPLSGV
Trigger: GACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCT...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGAGCACCACCACCCACTaGCGCCCGCTCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGSTTTH*RPLSGV
Trigger: GACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCT...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGGAGGCCAACCCGGTGTaGTCTGGGGTCCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGEANPV*SGVQEV
Trigger: CACCTCTTGGACCCCAGACCACACCGGGTTGGCCTC...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000359983.7
CDS-3UTR TCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCCCCTGGCCAGTAGGGTaGGGGCGGGTGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLPWPVG*GRVGVQ
Trigger: CTGCACGCCCACCCGCCCTCACCCTACTGGCCAGGG...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCCCTGGCCAGTAGGGTaGGGGCGGGTGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAPWPVG*GRVGVQ
Trigger: CTGCACGCCCACCCGCCCTCACCCTACTGGCCAGGG...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGCTGCTGCTCGGGGCTaGGGTCATCAAACTCGCGGC +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQAAARG*GHQTRG
Trigger: GCCGCGAGTTTGATGACCTCAGCCCCGAGCAGCAGC...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGGCTGCTGCTCGGGGCTaGGGTCATCAAACTCGCGGC +
Preference number: 4 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRAAARG*GHQTRG
Trigger: GCCGCGAGTTTGATGACCTCAGCCCCGAGCAGCAGC...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAGGCCACGGCCGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPGHGRA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACGGCCGTGGCC...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp GGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCGGGGCAGCTTCTCCATaGTGTCCAGGTCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GRTLGWVEGRHGQEPEDVGAASP*CPGLAG
Trigger: ACCCGCCAGACCTGGACATCATGGAGAAGCTGCCCC...GACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGGGTGGTGGGGAAGCGTaGCTCGAACACCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGGGGEA*LEHLTV
Trigger: GACTGTGAGGTGTTCGAGTCACGCTTCCCCACCACC...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAAGCGGCACGAGCAGGATaGGGAAGTGCAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GRPGGSVTLNISRAQDGEAARAG*GSAGPW
Trigger: CCATGGCCCTGCACTTCCTCATCCTGCTCGTGCCGC...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCGGCACGAGCAGGATaGGGAAGTGCAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARAARAG*GSAGPW
Trigger: CCATGGCCCTGCACTTCCTCATCCTGCTCGTGCCGC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGGGTCACCTGGAAAATaGGAGGCAGGGGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGGSPGK*EAGAAR
Trigger: TCGTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCC...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGGTCACCTGGAAAATaGGAGGCAGGGGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWGSPGK*EAGAAR
Trigger: TCGTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCC...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp AGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGCTGATCCCCCAGGGCTaGCCCAGTCCCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SWTSAWQTGRQCDSEHLPLIPQG*PSPRPG
Trigger: GCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCAG...CGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp GCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAACAGGACGGGGAACCCTaGGTCCAGGAGGCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: AHWSARQAEGLWMWGTRKQDGEP*VQEARG
Trigger: CCCGCGCGCCTCCTGGACTCAGGGTTCCCCGTCCTG...TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTGCAGACAGCGCGGCGGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCCGAGCGGATCACCTTaGCCATCTCAGGCTCATACT +
Preference number: 4 (lower is better)
Translates to: LCRQRGGRTLGWVEGRHGPSGSP*PSQAHT
Trigger: AGTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGG...ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCGGGCACGGATCCTCTaGACGCCCTTGCGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETRARIL*TPLRSE
Trigger: CTCGGACCGCAAGGGCGTGCAGAGGATCCGTGCCCG...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CTGACCTCGGGCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTTCTGGCTCCGGATCTTaGCCAGCTCCGTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LTSGLSFIRRDPVGKWASSGSGS*PAPCAG
Trigger: GCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGA...ACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGCCCGAGGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGCAAACTCGTCCAGCTTaGGCTGCAGCGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWQTRPA*AAAASA
Trigger: AGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTG...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGCGTTCTTGCGTGCCATaGGCCGCGTGCCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVRSCVP*AACPVP
Trigger: TGGCACTGGGCACGCGGCGCATGGCACGCAAGAACG...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGATGGCGTTCTTGCGTaGCATGCGCCGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQDGVLA*HAPRAQ
Trigger: CTGGGCACGCGGCGCATGGCACGCAAGAACGCCATC...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGATGGCGTTCTTGCGTaGCATGCGCCGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARDGVLA*HAPRAQ
Trigger: CTGGGCACGCGGCGCATGGCACGCAAGAACGCCATC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCACGATGGCGTTCTTaGGTGCCATGCGCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARARWRS*VPCAAC
Trigger: GCACGCGGCGCATGGCACGCAAGAACGCCATCGTGC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGACCTCGGGCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTACCCGGGACAGAGCCTaGAGGTCGGTGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: LTSGLSFIRRDPVGKWASTRDRA*RSVSNT
Trigger: CGTGTTCGACACCGACCTGCAGGCTCTGTCCCGGGT...ACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGCCCGAGGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCGCGGCGGGTCCAGCATaGCTACGCAGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSAAGPA*LRSPRR
Trigger: CCTTCGTGGGCTGCGTAGGCATGCTGGACCCGCCGC...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGGCGGCGGGTCCAGCATaGCTACGCAGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: VRNLRMSVVSGTRDAGGKAAGPA*LRSPRR
Trigger: CCTTCGTGGGCTGCGTAGGCATGCTGGACCCGCCGC...CTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CAGCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCACTCGTGATTTGGGGGTGGCGGCAGGCCTGGCGCTaGTGCTCGGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: QLPNKGEQAPAALVIWGWRQAWR*CSGLRS
Trigger: TGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTGCCG...CCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGATGCGGGACTTGTGTaGGGGCTCCACGCGGGCGAA +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGDAGLV*GLHAGE
Trigger: TTCGCCCGCGTGGAGCCCGCACACAAGTCCCGCATC...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGAGGTGGTCAGCGGCTaGCTACTCCAGGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQEVVSG*LLQACE
Trigger: CTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTC...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAACCCTGCCTCCCCCACTaGGTTTCTCTCACTGGCCGC +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQPCLPH*VSLTGR
Trigger: GCGGCCAGTGAGAGAAACGCAGTGGGGGAGGCAGGG...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGCCACGAAGGCGGTCGTaGTCTCCTCGCCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKPRRRS*SPRPPR
Trigger: TCGAGGAGGGCGAGGAGACCACGACCGCCTTCGTGG...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGCCACGAAGGCGGTCGTaGTCTCCTCGCCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARPRRRS*SPRPPR
Trigger: TCGAGGAGGGCGAGGAGACCACGACCGCCTTCGTGG...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGGGGCTGCCCACCCTCGCTGTACACAGCTGGGCCCAGATGGCCCCTTCTGATGCCGGGTCGGCGAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: RGLPTLAVHSWAQMAPSDAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTCGCCGACCCGGC...ATCAGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAGGGTGGGCAGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGCCAGGATCTGCTCCCTaGAGGTGGGGGTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRPGSAP*RWGSGV
Trigger: CACCCCTGACCCCCACCTCCAGGGAGCAGATCCTGG...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCCAGGATCTGCTCCCTaGAGGTGGGGGTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGPGSAP*RWGSGV
Trigger: CACCCCTGACCCCCACCTCCAGGGAGCAGATCCTGG...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTTCTCTGCCGCCGACTTaGCCACGGCCGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETSLPPT*PRPCLS
Trigger: GCTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGA...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGTGGCGGCAGCCACTGTaGCCAGGCCTACGTACACTC +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGWRQPL*PGLRTL
Trigger: GAGTGTACGTAGGCCTGGCCACAGTGGCTGCCGCCA...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCGGACAAGGCCATGGTaGTGGGGAAGCGTGACTCGA +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGRTRPW*WGSVTR
Trigger: TCGAGTCACGCTTCCCCACCACCATGGCCTTGTCCG...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGAGGCCAACCCGGTGTaGTCTGGGGTCCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWEANPV*SGVQEV
Trigger: CACCTCTTGGACCCCAGACCACACCGGGTTGGCCTC...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000359983.7
CDS-3UTR CCA 90 bp CTTGTGTCCGTCTCTCTGACCCTTCACCCGCCCGGGCCCGGAGACTCCACTCTGGAGGCCAACCCGGTGTaGTCTGGGGTCCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LVSVSLTLHPPGPGDSTLEANPV*SGVQEV
Trigger: CACCTCTTGGACCCCAGACCACACCGGGTTGGCCTC...CAGAGTGGAGTCTCCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGACCCGGTGGGCAAGTaGGCGAGTGTGGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARDPVGK*ASVVAR
Trigger: CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp CAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTTCCGGCGGGACCCGGTaGGCAAGTGGGCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QEPEDVGGLRYQGRGWQVSGGTR*ASGRVW
Trigger: CCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGA...AACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCCGGGAGCCGACTTTGTaGAAGCAGAGTGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RYQGRGWQVGPLRGRPGGREPTL*KQSGVE
Trigger: CTCCACTCCACTCTGCTTCCACAAAGTCGGCTCCCG...GCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCAGTTGGACCTCTGCGTaGCAGACCGGGCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GRTLGWVEGRHGQEPEDVSWTSA*QTGRQC
Trigger: ACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT...GACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGTCCCTGGCCCCGGTGTaGTCTGGGGTCCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARSLAPV*SGVQEV
Trigger: CACCTCTTGGACCCCAGACCACACCGGGGCCAGGGA...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570845.5
CDS-3UTR TCA 90 bp CAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCAGAAGGAAGTGGGCCCTGGCCAGTAGGGTaGGGGCGGGTGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: QESPGDRNYRPPRPEGSGPWPVG*GRVGVQ
Trigger: CTGCACGCCCACCCGCCCTCACCCTACTGGCCAGGG...CCCACTTCCTTCTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp GCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAAGGCCACGGCCGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: AHWSARQAEGLWMWGTRKGHGRA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACGGCCGTGGCC...TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGGGCAGCTTCTCCATaGTGTCCAGGTCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKGAASP*CPGLAG
Trigger: ACCCGCCAGACCTGGACATCATGGAGAAGCTGCCCC...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp AGGGGGCTGCCCACCCTCGCTGTACACAGCTGGGCCCAGATGGCCCCTTCTGATGGTGGTGGGGAAGCGTaGCTCGAACACCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: RGLPTLAVHSWAQMAPSDGGGEA*LEHLTV
Trigger: GACTGTGAGGTGTTCGAGTCACGCTTCCCCACCACC...ATCAGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAGGGTGGGCAGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTGCGGCACGAGCAGGATaGGGAAGTGCAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETAARAG*GSAGPW
Trigger: CCATGGCCCTGCACTTCCTCATCCTGCTCGTGCCGC...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp GTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACGGGTCACCTGGAAAATaGGAGGCAGGGGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: VVSGTRDAGGKLDLCVADGSPGK*EAGAAR
Trigger: TCGTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCC...GTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGTCACCTGGAAAATaGGAGGCAGGGGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGGSPGK*EAGAAR
Trigger: TCGTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCC...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGTCCGGGACAGGTACTTaGGGGCCTCATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGSGTGT*GPHPAG
Trigger: TCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGA...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp AGGGGGCTGCCCACCCTCGCTGTACACAGCTGGGCCCAGATGGCCCCTTCTGATCCACGGTCAGGAACCTaGGGATGTCGGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RGLPTLAVHSWAQMAPSDPRSGT*GCRWSQ
Trigger: CTGAGACCACCGACATCCTCAGGTTCCTGACCGTGG...ATCAGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAGGGTGGGCAGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp GGACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTCCACGGTCAGGAACCTaGGGATGTCGGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GHPRSALLPAPCVRLSDPPRSGT*GCRWSQ
Trigger: CTGAGACCACCGACATCCTCAGGTTCCTGACCGTGG...AGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CAGATGGCCCCTTCTGATCCCCCAGGGCTGACCCAGTCCCAGACCAGGCACGAAGTCTGCAAGGCAGGCTaGGGGGCTTTGGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: QMAPSDPPGLTQSQTRHEVCKAG*GALDVG
Trigger: CCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGAC...TTCGTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp CCTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGTCTGCAAGGCAGGCTaGGGGGCTTTGGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPPLRFSHWPPRTCEREEVCKAG*GALDVG
Trigger: CCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGAC...CTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCTCTCTGAGCAGCTCTaGCAGCGAGACGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGLSEQL*QRDDAV
Trigger: CACAGCATCGTCTCGCTGTCAGAGCTGCTCAGAGAG...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp TCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGAGCGAGGCCATGTCCGTaGTGGGACCTTACCCGACGG +
Preference number: 4 (lower is better)
Translates to: SAWQTGRQCDSEHLPSSGARPCP*WDLTRR
Trigger: CCGTCGGGTAAGGTCCCAGCACGGACATGGCCTCGC...TCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp AGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTCCTGCCTGGCACTCTCGGCGTTaGGTTCCTGCCACACGCCCA +
Preference number: 4 (lower is better)
Translates to: RLSRLVSRERTSSLRPPAWHSRR*VPATRP
Trigger: TGGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCA...GGCAGGAGGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGTGGCACTCTCGGCGTTaGGTTCCTGCCACACGCCCA +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARWHSRR*VPATRP
Trigger: TGGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCA...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGTCCTCTGCACGCCCTTaGGGTCCGAGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARSSARP*GPSGSP
Trigger: AGGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGA...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCTCCTCTGCACGCCCTTaGGGTCCGAGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: WSQVPGTRVASWTSAWQTSSARP*GPSGSP
Trigger: AGGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGA...GGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGTCTGGCTCCGGATCTTaGCCAGCTCCGTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKSGSGS*PAPCAG
Trigger: GCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGA...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTCTGGCTCCGGATCTTaGCCAGCTCCGTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGSGSGS*PAPCAG
Trigger: GCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGA...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCTCTGGCTCCGGATCTTaGCCAGCTCCGTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TVRNLRMSVVSGTRDAGGSGSGS*PAPCAG
Trigger: GCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGA...GCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTCGTCCAGCTTGCGCTaGAGCGGCGTCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLSSSLR*SGVRSG
Trigger: GCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGA...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CCTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGCAAACTCGTCCAGCTTaGGCTGCAGCGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: PPPLRFSHWPPRTCEREEQTRPA*AAAASA
Trigger: AGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTG...CTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCATGGCGTGGGACAGCTaGCGTCCAAACTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRTLGWVEGRHGQEPEDVMAWDS*RPNSSS
Trigger: GCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCAT...GACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGGCGCCGCGTGCCCAGTaGCAGGCATGTAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRAPRAQ*QACSDD
Trigger: GTCATCACTACATGCCTGGCACTGGGCACGCGGCGC...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGCGCCGCGTGCCCAGTaGCAGGCATGTAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGAPRAQ*QACSDD
Trigger: GTCATCACTACATGCCTGGCACTGGGCACGCGGCGC...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGCGTTCTTGCGTGCCATaGGCCGCGTGCCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VRNLRMSVVSGTRDAGGKRSCVP*AACPVP
Trigger: TGGCACTGGGCACGCGGCGCATGGCACGCAAGAACG...CTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGACCCGGGACAGAGCCTaGAGGTCGGTGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARTRDRA*RSVSNT
Trigger: CGTGTTCGACACCGACCTGCAGGCTCTGTCCCGGGT...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAACCCGGGACAGAGCCTaGAGGTCGGTGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQTRDRA*RSVSNT
Trigger: CGTGTTCGACACCGACCTGCAGGCTCTGTCCCGGGT...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGCCGTGTCCCCAAAGATaGCAAGCCTGCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWPCPQR*QACGRW
Trigger: CCATCTGCCGCAGGCTTGGCATCTTTGGGGACACGG...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCGGCCCGTGTAGGCCTTaGCCGCCACGTCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSGPCRP*PPRLPC
Trigger: ACACGGAAGACGTGGCGGGCAAGGCCTACACGGGCC...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp AGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGCAGGCCTGGCGCTGCTaGTCGGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: SWTSAWQTGRQCDSEHLPQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTG...CGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGGATGCGGGACTTGTGTaGGGGCTCCACGCGGGCGAA +
Preference number: 4 (lower is better)
Translates to: EDVGGLRYQGRGWQVGPLDAGLV*GLHAGE
Trigger: TTCGCCCGCGTGGAGCCCGCACACAAGTCCCGCATC...CAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCAGGTTCTCCACGATaGGGGACTTGTGTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGAGSPR*GTCVRA
Trigger: AGCCCGCACACAAGTCCCGCATCGTGGAGAACCTGC...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGGGCGATGCCGATCTCTaGTTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGGDADL*FLQGWC
Trigger: GCACCAGCCCTGAAGAAAGCAGAGATCGGCATCGCC...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CGGGCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGGGGCAGGCCCAGAATTaGCGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: RACHLSGGTRWASGRVWWGQAQN*REEDAD
Trigger: GTCTGCATCTTCCTCACGGCAATTCTGGGCCTGCCC...CCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTGAGGTGGTCAGCGGCTaGCTACTCCAGGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETEVVSG*LLQACE
Trigger: CTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTC...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp CAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAAGGGATGTGAGTCTAGAGGCCCCCAGCTGTaGAGACAGCGCGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: QGRLRGFGCGGLGKGCESRGPQL*RQRGGR
Trigger: GCGGCCGCCGCGCTGTCTGCACAGCTGGGGGCCTCT...AGACTCACATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp AGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTCCTGCCGGGAGGGAGAGCGGGTaGCCTTGGGGAATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RLSRLVSRERTSSLRPPAGRESG*PWGISH
Trigger: ATGGCTGATTCCCCAAGGGCACCCGCTCTCCCTCCC...GGCAGGAGGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTGCAGACAGCGCGGCGGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTAGGGACAATCCTTGGTaGAGGTTTCTGCTACCCCTC +
Preference number: 4 (lower is better)
Translates to: LCRQRGGRTLGWVEGRHGRDNPW*RFLLPL
Trigger: GAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT...ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCCCCTGCCTCCCCCACTaGGTTTCTCTCACTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSPCLPH*VSLTGR
Trigger: GCGGCCAGTGAGAGAAACGCAGTGGGGGAGGCAGGG...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GGACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTAGGCACCAGACTCCCTaGCTCCCCCACTGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: GHPRSALLPAPCVRLSDPRHQTP*LPHCVS
Trigger: AGAAACGCAGTGGGGGAGGCAGGGAGTCTGGTGCCT...AGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCCACGAAGGCGGTCGTaGTCTCCTCGCCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: EDVGGLRYQGRGWQVGPLPRRRS*SPRPPR
Trigger: TCGAGGAGGGCGAGGAGACCACGACCGCCTTCGTGG...CAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCCACACGCCCACAATaGCGTTGGCCACGAGGATCA +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWATRPQ*RWPRGS
Trigger: TGATCCTCGTGGCCAACGCCATTGTGGGCGTGTGGC...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTATTCACCCGTCAGGATaGACTGGTCCACTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRGWQVGPLRGRPGGSVTIHPSG*TGPLAA
Trigger: CGCTGCGAGTGGACCAGTCCATCCTGACGGGTGAAT...AGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGCCGTGTGCAGGCCGGTaGCCACGGCCACACCCACCG +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLPCAGR*PRPHPP
Trigger: CGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGG...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAATCGACTGCCGCCATCTaGCTCCGGATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQSTAAI*LRILPS
Trigger: GCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGA...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCCGGGTCGGCGAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTCGCCGACCCGGC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACCAGGATCTGCTCCCTaGAGGTGGGGGTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SAWQTGRQCDSEHLPSSGPGSAP*RWGSGV
Trigger: CACCCCTGACCCCCACCTCCAGGGAGCAGATCCTGG...TCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCAAGCCTGCGGCAGATaGCCACGGCAGTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGQACGR*PRQCLC
Trigger: ACAAAGGCACTGCCGTGGCCATCTGCCGCAGGCTTG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGACCCTTCACCCGCCCGGGCCCTGCACATATAAACAGAAGCAGCCTCGAGCTTCTCTGCCGCCGACTTaGCCACGGCCGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LTLHPPGPCTYKQKQPRASLPPT*PRPCLS
Trigger: GCTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGA...AGCTCGAGGCTGCTTCTGTTTATATGTGCAGGGCCCGGGCGGGTGAAGGGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCATCTCTGCCGCCGACTTaGCCACGGCCGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPSLPPT*PRPCLS
Trigger: GCTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGA...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTTGGCGGCAGCCACTGTaGCCAGGCCTACGTACACTC +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGWRQPL*PGLRTL
Trigger: GAGTGTACGTAGGCCTGGCCACAGTGGCTGCCGCCA...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAATGGCGGCAGCCACTGTaGCCAGGCCTACGTACACTC +
Preference number: 4 (lower is better)
Translates to: GRPGGSVTLNISRAQDGEWRQPL*PGLRTL
Trigger: GAGTGTACGTAGGCCTGGCCACAGTGGCTGCCGCCA...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CAGATGGCCCCTTCTGATCCCCCAGGGCTGACCCAGTCCCAGACCAGGCACGAATGGCGGCAGCCACTGTaGCCAGGCCTACGTACACTC +
Preference number: 4 (lower is better)
Translates to: QMAPSDPPGLTQSQTRHEWRQPL*PGLRTL
Trigger: GAGTGTACGTAGGCCTGGCCACAGTGGCTGCCGCCA...TTCGTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCGACCCGGTGGGCAAGTaGGCGAGTGTGGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSDPVGK*ASVVAR
Trigger: CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTC...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCTCCGGCGGGACCCGGTaGGCAAGTGGGCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: MGTISLRYTPETPLCSQRSGGTR*ASGRVW
Trigger: CCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGA...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGTCCGGCGGGACCCGGTaGGCAAGTGGGCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPASGGTR*ASGRVW
Trigger: CCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGA...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp CTGACCTCGGGCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTCTCGCTGTACACAGCTaGGCCCAGATGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LTSGLSFIRRDPVGKWASLAVHS*AQMAPS
Trigger: AGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAG...ACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGCCCGAGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp ACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCACGCGGGTGGCAAGTTaGACCTCTGCGTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: TVRNLRMSVVSGTRDAGGTRVAS*TSAWQT
Trigger: GGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGT...GCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTGGCCGCACACTGGGCTaGGTAGAAGGGCGCCACGGT +
Preference number: 4 (lower is better)
Translates to: HGAHWSARQAEGLWMWGTGRTLG*VEGRHG
Trigger: ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC...AGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GCCCAGATGGCCCCTTCTGATCCCCCAGGGCTGACCCAGTCCCAGACCAGGCACCTGCGTTTCTCTCACTaGCCGCCCAGAACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: AQMAPSDPPGLTQSQTRHLRFSH*PPRTCE
Trigger: CTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAG...GTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCCACGGCGATCTTaGAGTAGTAGACAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQGPRRS*SSRQRH
Trigger: GTGGCGCTGTCTACTACTTCAAGATCGCCGTGGCCC...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAGCTGCTGCTCGGGGCTaGGGTCATCAAACTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPAAARG*GHQTRG
Trigger: GCCGCGAGTTTGATGACCTCAGCCCCGAGCAGCAGC...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGGGCTGCTGCTCGGGGCTaGGGTCATCAAACTCGCGGC +
Preference number: 4 (lower is better)
Translates to: QKQPRALGSRLCGSRVEWAAARG*GHQTRG
Trigger: GCCGCGAGTTTGATGACCTCAGCCCCGAGCAGCAGC...CCACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGGGTGGTGGGGAAGCGTaGCTCGAACACCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGGGGEA*LEHLTV
Trigger: GACTGTGAGGTGTTCGAGTCACGCTTCCCCACCACC...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp AACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACGCGGCACGAGCAGGATaGGGAAGTGCAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: NLRMSVVSGTRDAGGKLDAARAG*GSAGPW
Trigger: CCATGGCCCTGCACTTCCTCATCCTGCTCGTGCCGC...GTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCGGGTCACCTGGAAAATaGGAGGCAGGGGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSGSPGK*EAGAAR
Trigger: TCGTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCC...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTGGGTCACCTGGAAAATaGGAGGCAGGGGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETGSPGK*EAGAAR
Trigger: TCGTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCC...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAATCCGGGACAGGTACTTaGGGGCCTCATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQSGTGT*GPHPAG
Trigger: TCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGA...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp TACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTCCTGCGAGACTGTCCTaGGAAGGCCTGGATAAAGAC +
Preference number: 4 (lower is better)
Translates to: YQGRGWQVGPLRGRPGGSPARLS*EGLDKD
Trigger: GTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGG...ACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR TCA 90 bp CTACAGAACATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTCAGGACGGGGAACCCTaGGTCCAGGAGGCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LQNMEPIGLQGRLRGFGCQDGEP*VQEARG
Trigger: CCCGCGCGCCTCCTGGACTCAGGGTTCCCCGTCCTG...ACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGTGCTTCCTCCCTCTCTaGGCAGCTCTGACAGCGAGA +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGCFLPL*AALTAR
Trigger: TCTCGCTGTCAGAGCTGCTCAGAGAGGGAGGAAGCA...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTTGCCCAGCTCCGTGTaGAGGCCGGTGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCLPSSV*RPVATA
Trigger: GGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAA...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTTCTGGCTCCGGATCTTaGCCAGCTCCGTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETSGSGS*PAPCAG
Trigger: GCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGA...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCCCGCTCGGGCTCGACTaGCGCCATCTGGCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: MGTISLRYTPETPLCSQRPLGLD*RHLAPD
Trigger: ATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGG...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GCCAGAGCTGCAGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACTCGTCCAGCTTGCGCTaGAGCGGCGTCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: ARAAEQGTSQESPGDRNYSSSLR*SGVRSG
Trigger: GCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGA...GTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCTGCAGCTCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCGTCCAGCTTGCGCTaGAGCGGCGTCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCSSSLR*SGVRSG
Trigger: GCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGA...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp AGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGCAAACTCGTCCAGCTTaGGCTGCAGCGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: SWTSAWQTGRQCDSEHLPQTRPA*AAAASA
Trigger: AGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTG...CGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCAAACTCGTCCAGCTTaGGCTGCAGCGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETQTRPA*AAAASA
Trigger: AGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTG...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTATGGCGTGGGACAGCTaGCGTCCAAACTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGMAWDS*RPNSSS
Trigger: GCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCAT...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGATGGCGTGGGACAGCTaGCGTCCAAACTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARMAWDS*RPNSSS
Trigger: GCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCAT...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTGCGCCGCGTGCCCAGTaGCAGGCATGTAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETAPRAQ*QACSDD
Trigger: GTCATCACTACATGCCTGGCACTGGGCACGCGGCGC...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CTGACCCTTCACCCGCCCGGGCCCTGCACATATAAACAGAAGCAGCCTCGAGCTGATGGCGTTCTTGCGTaGCATGCGCCGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LTLHPPGPCTYKQKQPRADGVLA*HAPRAQ
Trigger: CTGGGCACGCGGCGCATGGCACGCAAGAACGCCATC...AGCTCGAGGCTGCTTCTGTTTATATGTGCAGGGCCCGGGCGGGTGAAGGGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAGATGGCGTTCTTGCGTaGCATGCGCCGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPDGVLA*HAPRAQ
Trigger: CTGGGCACGCGGCGCATGGCACGCAAGAACGCCATC...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAGCACGATGGCGTTCTTaGGTGCCATGCGCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPARWRS*VPCAAC
Trigger: GCACGCGGCGCATGGCACGCAAGAACGCCATCGTGC...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCCAGAGCCGAGTCGTTaGACAGGGCGCAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: EDVGGLRYQGRGWQVGPLPEPSR*TGRRWS
Trigger: CGACCATCTGCGCCCTGTGCAACGACTCGGCTCTGG...CAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCACTCGTGATTTGGGGGTGGGGCCAGAGCCGAGTCGTTaGACAGGGCGCAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: ASEQGGASSSCTRDLGVGPEPSR*TGRRWS
Trigger: CGACCATCTGCGCCCTGTGCAACGACTCGGCTCTGG...CCCCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGAGGGCGGGTGGGCGTaGAGTACACGGACATGGATT +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVEGGWA*STRTWI
Trigger: AATCCATGTCCGTGTACTGCACGCCCACCCGCCCTC...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGATCTTTGCCAGGATCTaGTCCCTGGAGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGIFARI*SLEVGV
Trigger: GACCCCCACCTCCAGGGAGCAGATCCTGGCAAAGAT...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCGCGGCGGGTCCAGCATaGCTACGCAGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLAAGPA*LRSPRR
Trigger: CCTTCGTGGGCTGCGTAGGCATGCTGGACCCGCCGC...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGGCTACAGAACATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGAGCGGCGGGTCCAGCATaGCTACGCAGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: GLQNMEPIGLQGRLRGFGAAGPA*LRSPRR
Trigger: CCTTCGTGGGCTGCGTAGGCATGCTGGACCCGCCGC...TCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTCTGTAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGCAAAGATGCCAAGCCTaGGGCAGATGGCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVQRCQA*GRWPRQ
Trigger: CTGCCGTGGCCATCTGCCGCAGGCTTGGCATCTTTG...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GATCCCCCAGGGCTGACCCAGTCCCAGACCAGGCACGAAGAGAGAGGTCAGAGCCCGTGTCCCCAAAGATaGCAAGCCTGCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: DPPGLTQSQTRHEERGQSPCPQR*QACGRW
Trigger: CCATCTGCCGCAGGCTTGGCATCTTTGGGGACACGG...GCTCTGACCTCTCTCTTCGTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGCCCGTGTAGGCCTTaGCCGCCACGTCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: QEPEDVGGLRYQGRGWQVGPCRP*PPRLPC
Trigger: ACACGGAAGACGTGGCGGGCAAGGCCTACACGGGCC...AACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGCAGGTTCTCCACGATaGGGGACTTGTGTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQAGSPR*GTCVRA
Trigger: AGCCCGCACACAAGTCCCGCATCGTGGAGAACCTGC...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCGGCGATGCCGATCTCTaGTTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GRTLGWVEGRHGQEPEDVGDADL*FLQGWC
Trigger: GCACCAGCCCTGAAGAAAGCAGAGATCGGCATCGCC...GACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGCCACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGTGCCTACTCCAGGCCTaGGAGACTGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GATVRNLRMSVVSGTRDACLLQA*ETVLRR
Trigger: CCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCA...CGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR GCA 90 bp TGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCCTCCTGGGCCAGAGCTaGAGAGCAGGGAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: WSQVPGTRVASWTSAWQTLLGQS*RAGNFP
Trigger: TGGGAAGTTCCCTGCTCTGCAGCTCTGGCCCAGGAG...GGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGACCTCGGGCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGATCTCTGGGTATGCTaGCAGCTCCGGCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LTSGLSFIRRDPVGKWASDLWVC*QLRLLG
Trigger: GCCAAGAAGCCGGAGCTGGCAGCATACCCAGAGATC...ACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGCCCGAGGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGAGCAAGCTCCAGCTaGACTCGTGATTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWGASSS*TRDLGV
Trigger: CACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCC...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GTCCTCCGTCAGTGCAGAGGCACCAGTCACCAAGTGAACGTCCAGCTTCCGAACCTCGCTCCGCCCTCCTaGCGGCTCCTTGTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: VLRQCRGTSHQVNVQLPNLAPPS*RLLVSV
Trigger: GACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAG...GTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGCCTCTGCACTGACGGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGGAGGGCAAGTTGGACCTCTaGGTGGCAGACCGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: EAASSSREPTLWKQSGVEGKLDL*VADRAA
Trigger: TGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCC...CTCCACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGGCTGTCACCGAGAAGTaGCGCAGCACGTCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAAVTEK*RSTSAA
Trigger: GGCCGCCGACGTGCTGCGCCACTTCTCGGTGACAGC...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACCACGAAGGCGGTCGTaGTCTCCTCGCCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPPRRRS*SPRPPR
Trigger: TCGAGGAGGGCGAGGAGACCACGACCGCCTTCGTGG...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGGCCACACGCCCACAATaGCGTTGGCCACGAGGATCA +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGATRPQ*RWPRGS
Trigger: TGATCCTCGTGGCCAACGCCATTGTGGGCGTGTGGC...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTCCTGCCGCCACACGCCCACAATaGCGTTGGCCACGAGGATCA +
Preference number: 4 (lower is better)
Translates to: RLSRLVSRERTSSLRPPAATRPQ*RWPRGS
Trigger: TGATCCTCGTGGCCAACGCCATTGTGGGCGTGTGGC...GGCAGGAGGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAAGCCACACGCCCACAATaGCGTTGGCCACGAGGATCA +
Preference number: 4 (lower is better)
Translates to: GRPGGSVTLNISRAQDGEATRPQ*RWPRGS
Trigger: TGATCCTCGTGGCCAACGCCATTGTGGGCGTGTGGC...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGATTCACCCGTCAGGATaGACTGGTCCACTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWIHPSG*TGPLAA
Trigger: CGCTGCGAGTGGACCAGTCCATCCTGACGGGTGAAT...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGCTCTGGGGTCTGGGATaGCCTCTGTGTGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWLWGLG*PLCAWS
Trigger: TGACCAAGCACACAGAGGCCATCCCAGACCCCAGAG...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTCCGTGTGCAGGCCGGTaGCCACGGCCACACCCACCG +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPPCAGR*PRPHPP
Trigger: CGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGG...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTATCACAGAGATGGCGTaGGACAGCTGCCGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: YQGRGWQVGPLRGRPGGSITEMA*DSCRPN
Trigger: GTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGAT...ACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCAAGCCAGGAGCCACCGTaGGCCGGGTCGGCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QGTSQESPGDRNYRPPRPSQEPP*AGSAKW
Trigger: CCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCT...TGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGAGCCAGGAGCCACCGTaGGCCGGGTCGGCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQSQEPP*AGSAKW
Trigger: CCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCT...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCAGGCTTCGCACGATaGCGTTCTTGCGTGCCATGC +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARAGFAR*RSCVPC
Trigger: GCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACCAGGATCTGCTCCCTaGAGGTGGGGGTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPPGSAP*RWGSGV
Trigger: CACCCCTGACCCCCACCTCCAGGGAGCAGATCCTGG...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CCTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGCAAGCCTGCGGCAGATaGCCACGGCAGTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PPPLRFSHWPPRTCEREEQACGR*PRQCLC
Trigger: ACAAAGGCACTGCCGTGGCCATCTGCCGCAGGCTTG...CTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTACACAAACCACCAGGTaGCGGCAGCCACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGTQTTR*RQPLWP
Trigger: TGGCCACAGTGGCTGCCGCCACCTGGTGGTTTGTGT...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAACGGACAAGGCCATGGTaGTGGGGAAGCGTGACTCGA +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQRTRPW*WGSVTR
Trigger: TCGAGTCACGCTTCCCCACCACCATGGCCTTGTCCG...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGCGGACAAGGCCATGGTaGTGGGGAAGCGTGACTCGA +
Preference number: 4 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRRTRPW*WGSVTR
Trigger: TCGAGTCACGCTTCCCCACCACCATGGCCTTGTCCG...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACGCACGGACAAGGCCATaGTGGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: VVSGTRDAGGKLDLCVADARTRP*WWGSVT
Trigger: AGTCACGCTTCCCCACCACCATGGCCTTGTCCGTGC...GTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCACGGACAAGGCCATaGTGGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARARTRP*WWGSVT
Trigger: AGTCACGCTTCCCCACCACCATGGCCTTGTCCGTGC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGGCACGGACAAGGCCATaGTGGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRARTRP*WWGSVT
Trigger: AGTCACGCTTCCCCACCACCATGGCCTTGTCCGTGC...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGCTGGCGCCCGCTCAGTaGGGTCACCTGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKLAPAQ*GHLENE
Trigger: CTCATTTTCCAGGTGACCCCACTGAGCGGGCGCCAG...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp GCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAAAGCACCACCACCCACTaGCGCCCGCTCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AHWSARQAEGLWMWGTRKSTTTH*RPLSGV
Trigger: GACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCT...TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGCAACCCGGTGTGGTCTaGGGTCCAAGAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARQPGVV*GPRGGQ
Trigger: CTGACCACCTCTTGGACCCCAGACCACACCGGGTTG...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000359983.7
CDS-3UTR CCA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCGGGGCCCCGGATCTCTaGGTATGCTGCCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: MGTISLRYTPETPLCSQRGAPDL*VCCQLR
Trigger: CCGGAGCTGGCAGCATACCCAGAGATCCGGGGCCCC...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GGGAAAGGACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTCTCGCTGTACACAGCTaGGCCCAGATGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKGHPRSALLPAPCVRLSLAVHS*AQMAPS
Trigger: AGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAG...AGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGTCCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGTACCAGGGACGCGGGTaGCAAGTTGGACCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRYQGRG*QVGPLR
Trigger: ACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTTCACCCGCCCGGGCCCGGCATAGGGACAATCCTTaGTGCAGGTTTCTGCTACCC +
Preference number: 4 (lower is better)
Translates to: LLPAPCVRLSDPSPARARHRDNP*CRFLLP
Trigger: GGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATG...CCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGTCTTCCGGTGTGGTCTaGGGTCCAAGAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWSSGVV*GPRGGQ
Trigger: CTGACCACCTCTTGGACCCCAGACCACACCGGAAGA...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352011.7
CDS-3UTR TCA 90 bp AGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCCCGCTTTGCCCGATGTaGTATTGGTGCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: RYQGRGWQVGPLRGRPGGPLCPM*YWCQKT
Trigger: TGTTTTCTGGCACCAATATCACATCGGGCAAAGCGG...GCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGTGGTACCCGAGATGGTaGACTCGTGCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWWYPRW*TRAKGR
Trigger: CCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCA...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGTGGTACCCGAGATGGTaGACTCGTGCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGWYPRW*TRAKGR
Trigger: CCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCA...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCGCTGCTGCTCGGGGCTaGGGTCATCAAACTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLAAARG*GHQTRG
Trigger: GCCGCGAGTTTGATGACCTCAGCCCCGAGCAGCAGC...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGCCCAGAATTGCCGTaGGGAAGATGCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGGPELP*GRCRRP
Trigger: AGGTCGTCTGCATCTTCCTCACGGCAATTCTGGGCC...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGCCAGGTCTGGCGGGTTaGAGCCCAGAGCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLPGLAG*SPEPWQ
Trigger: CTGCCACGGCTCTGGGCTTCAACCCGCCAGACCTGG...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGTCAGCTGGTAGAAGTTaGTGTGAGGTCCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWSAGRS*CEVPRR
Trigger: ACGCCGAGGGACCTCACATCAACTTCTACCAGCTGA...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCGCGGCACGAGCAGGATaGGGAAGTGCAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLAARAG*GSAGPW
Trigger: CCATGGCCCTGCACTTCCTCATCCTGCTCGTGCCGC...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp GGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCTCAGCGGCACGAGCAGGATaGGGAAGTGCAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GTISLRYTPETPLCSQRSAARAG*GSAGPW
Trigger: CCATGGCCCTGCACTTCCTCATCCTGCTCGTGCCGC...TGAGCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000570845.5
CDS-3UTR TCA 90 bp CAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCGGGTCACCTGGAAAATaGGAGGCAGGGGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: QVGPLRGRPGGSVTLNISGSPGK*EAGAAR
Trigger: TCGTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCC...GGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp TCCAGCCAGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTGGGCACCATCAGTCTaGGGTACACACCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: SSQAFPTCLPGKDILAPPWAPSV*GTHRRL
Trigger: GAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCA...GGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGTGGGCACCATCAGTCTaGGGTACACACCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVWAPSV*GTHRRL
Trigger: GAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCA...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp GCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCACTCGTGATTTGGGGGTGGGGCCACGGTCAGGAACCTaGGGATGTCGGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ASEQGGASSSCTRDLGVGPRSGT*GCRWSQ
Trigger: CTGAGACCACCGACATCCTCAGGTTCCTGACCGTGG...CCCCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp CTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTTCACCCGCCCGGGCCCGGCATCTTCCTCTCATCTaGTATGACGTGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLPAPCVRLSDPSPARARHLPLI*YDVFLQ
Trigger: CTGGAGGAACACGTCATATCAGATGAGAGGAAGATG...CCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR TCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCTCTCTGAGCAGCTCTaGCAGCGAGACGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGLSEQL*QRDDAV
Trigger: CACAGCATCGTCTCGCTGTCAGAGCTGCTCAGAGAG...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp TTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAAGACGGGCACGGATCCTCTaGACGCCCTTGCGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: FSTKQQVSRWVQGPLLLRRARIL*TPLRSE
Trigger: CTCGGACCGCAAGGGCGTGCAGAGGATCCGTGCCCG...TCTTAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTCCGCTCGGGCTCGACTaGCGCCATCTGGCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCPLGLD*RHLAPD
Trigger: ATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGG...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCCGTTCTTGCGTGCCATaGGCCGCGTGCCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLRSCVP*AACPVP
Trigger: TGGCACTGGGCACGCGGCGCATGGCACGCAAGAACG...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCGCACGATGGCGTTCTTaGGTGCCATGCGCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: MGTISLRYTPETPLCSQRARWRS*VPCAAC
Trigger: GCACGCGGCGCATGGCACGCAAGAACGCCATCGTGC...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGGCTACAGAACATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGAGCACGATGGCGTTCTTaGGTGCCATGCGCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: GLQNMEPIGLQGRLRGFGARWRS*VPCAAC
Trigger: GCACGCGGCGCATGGCACGCAAGAACGCCATCGTGC...TCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTCTGTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGGAGCCAGAGCCGAGTCGTTaGACAGGGCGCAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: EAASSSREPTLWKQSGVEPEPSR*TGRRWS
Trigger: CGACCATCTGCGCCCTGTGCAACGACTCGGCTCTGG...CTCCACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp AACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACACCCGGGACAGAGCCTaGAGGTCGGTGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: NLRMSVVSGTRDAGGKLDTRDRA*RSVSNT
Trigger: CGTGTTCGACACCGACCTGCAGGCTCTGTCCCGGGT...GTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTATCTTTGCCAGGATCTaGTCCCTGGAGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGIFARI*SLEVGV
Trigger: GACCCCCACCTCCAGGGAGCAGATCCTGGCAAAGAT...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCACGGCAGGCCTGGCGCTaGTGCTCGGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPRQAWR*CSGLRS
Trigger: TGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTGCCG...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCAGGCCCAGAATTaGCGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQGQAQN*REEDAD
Trigger: GTCTGCATCTTCCTCACGGCAATTCTGGGCCTGCCC...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAAGGGCAGGCCCAGAATTaGCGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: GRPGGSVTLNISRAQDGEGQAQN*REEDAD
Trigger: GTCTGCATCTTCCTCACGGCAATTCTGGGCCTGCCC...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGTGCCTACTCCAGGCCTaGGAGACTGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKCLLQA*ETVLRR
Trigger: CCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCA...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCGAGGTGGTCAGCGGCTaGCTACTCCAGGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLEVVSG*LLQACE
Trigger: CTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTC...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp CAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAAGGGATGTGAGTCTCTCCGGCTTCTTGGCTaGCCCCTCCCAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QGRLRGFGCGGLGKGCESLRLLG*PLPACS
Trigger: GCTGCAGGCTGGGAGGGGGCAGCCAAGAAGCCGGAG...AGACTCACATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAAGGGATGTGAGTCTCTCGCTCCGCCCTCCTaGCGGCTCCTTGTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: QGRLRGFGCGGLGKGCESLAPPS*RLLVSV
Trigger: GACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAG...AGACTCACATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCGGGAGGGAGAGCGGGTaGCCTTGGGGAATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QVGPLRGRPGGSVTLNISGRESG*PWGISH
Trigger: ATGGCTGATTCCCCAAGGGCACCCGCTCTCCCTCCC...GGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTGCTGTCACCGAGAAGTaGCGCAGCACGTCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCAVTEK*RSTSAA
Trigger: GGCCGCCGACGTGCTGCGCCACTTCTCGGTGACAGC...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCACACTCGGGAGCTCGTTaGGGCCGTAGCGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPHSGAR*GRSAPA
Trigger: CGCGGGAGCGCTACGGCCCCAACGAGCTCCCGAGTG...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGTGGCCTCTGTGTGCTTaGTCACGGACACAGATTCAC +
Preference number: 4 (lower is better)
Translates to: FIRRDPVGKWASVVARVGWPLCA*SRTQIH
Trigger: GTGAATCTGTGTCCGTGACCAAGCACACAGAGGCCA...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CAGCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCACTCGTGATTTGGGGGTGGTCGACTGCCGCCATCTaGCTCCGGATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QLPNKGEQAPAALVIWGWSTAAI*LRILPS
Trigger: GCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGA...CCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGATCACAGAGATGGCGTaGGACAGCTGCCGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWITEMA*DSCRPN
Trigger: GTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGAT...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TCAGAGCCGGTAAGAAGGACCCCCAGAGTCCTCCGTCAGTGCAGAGGCACCAGTGCCGGGTCGGCGAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: SEPVRRTPRVLRQCRGTSAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTCGCCGACCCGGC...ACTGGTGCCTCTGCACTGACGGAGGACTCTGGGGGTCCTTCTTACCGGCTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCAGCCAGGAGCCACCGTaGGCCGGGTCGGCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFSQEPP*AGSAKW
Trigger: CCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCT...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTGCAGGCTTCGCACGATaGCGTTCTTGCGTGCCATGC +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETAGFAR*RSCVPC
Trigger: GCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGC...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCATGTCCTCCTTCCTTaGGGGCGCGTCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQHVLLP*GRVPGG
Trigger: GCCACCCGGGACGCGCCCCCAAGGAAGGAGGACATG...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCAAGCCTGCGGCAGATaGCCACGGCAGTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETQACGR*PRQCLC
Trigger: ACAAAGGCACTGCCGTGGCCATCTGCCGCAGGCTTG...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTGCACGGACAAGGCCATaGTGGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETARTRP*WWGSVT
Trigger: AGTCACGCTTCCCCACCACCATGGCCTTGTCCGTGC...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GGACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTACAGGCAGAGATATCTaGAGCACCACCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: GHPRSALLPAPCVRLSDPTGRDI*STTTHW
Trigger: CCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGT...AGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGAGACAGGCGTGCATGTaGTTCCGGGACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWRQACM*FRDRYL
Trigger: CAAGTACCTGTCCCGGAACCACATGCACGCCTGTCT...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000570845.5
CDS-3UTR CCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGAGACAGGCGTGCATGTaGTTCCGGGACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGRQACM*FRDRYL
Trigger: CAAGTACCTGTCCCGGAACCACATGCACGCCTGTCT...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GCCAGAGCTGCAGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACGGGGCCCCGGATCTCTaGGTATGCTGCCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ARAAEQGTSQESPGDRNYGAPDL*VCCQLR
Trigger: CCGGAGCTGGCAGCATACCCAGAGATCCGGGGCCCC...GTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCTGCAGCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGCGGGAGCCGACTTTGTaGAAGCAGAGTGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARREPTL*KQSGVE
Trigger: CTCCACTCCACTCTGCTTCCACAAAGTCGGCTCCCG...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp TGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACAGTTGGACCTCTGCGTaGCAGACCGGGCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: WVEGRHGQEPEDVGGLRYSWTSA*QTGRQC
Trigger: ACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT...GTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTTGTGTCCGTCTCTCTGACCCTTCACCCGCCCGGGCCCGGAGACTCCACTCTGCAGGCTGAGGGGCTTTaGATGTGGGGGACTAGGAAA +
Preference number: 4 (lower is better)
Translates to: LVSVSLTLHPPGPGDSTLQAEGL*MWGTRK
Trigger: TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTG...CAGAGTGGAGTCTCCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR CCA 90 bp GTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCTGCGTTTCTCTCACTaGCCGCCCAGAACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VVSGTRDAGGKLDLCVADLRFSH*PPRTCE
Trigger: CTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAG...GTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGGAGGGGCCACGGCGATCTTaGAGTAGTAGACAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: EAASSSREPTLWKQSGVEGPRRS*SSRQRH
Trigger: GTGGCGCTGTCTACTACTTCAAGATCGCCGTGGCCC...CTCCACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAGGGCCACGGCGATCTTaGAGTAGTAGACAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPGPRRS*SSRQRH
Trigger: GTGGCGCTGTCTACTACTTCAAGATCGCCGTGGCCC...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGGCTCCCCACGCGGACTaGGCTACAGCGCTCGATCAC +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQAPHAD*ATALDH
Trigger: GTGATCGAGCGCTGTAGCTCAGTCCGCGTGGGGAGC...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTGGGGCAGCTTCTCCATaGTGTCCAGGTCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTGAASP*CPGLAG
Trigger: ACCCGCCAGACCTGGACATCATGGAGAAGCTGCCCC...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAATCAGCTGGTAGAAGTTaGTGTGAGGTCCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQSAGRS*CEVPRR
Trigger: ACGCCGAGGGACCTCACATCAACTTCTACCAGCTGA...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CAGCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCACTCGTGATTTGGGGGTGGGGTGGTGGGGAAGCGTaGCTCGAACACCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: QLPNKGEQAPAALVIWGWGGGEA*LEHLTV
Trigger: GACTGTGAGGTGTTCGAGTCACGCTTCCCCACCACC...CCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAACCTGCGAGACTGTCCTaGGAAGGCCTGGATAAAGAC +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQPARLS*EGLDKD
Trigger: GTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGG...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000570845.5
CDS-3UTR TCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGCCTGCGAGACTGTCCTaGGAAGGCCTGGATAAAGAC +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVPARLS*EGLDKD
Trigger: GTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGG...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000570845.5
CDS-3UTR TCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCTGGGCACCATCAGTCTaGGGTACACACCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSWAPSV*GTHRRL
Trigger: GAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCA...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp AGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCAGCCAGATGGCCCCTTCTaGTCCCCCAGGGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: RELPRRVQETGITDLPGQPDGPF*SPRADP
Trigger: TGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTGG...CTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGCCGAGCGGATCACCTTaGCCATCTCAGGCTCATACT +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARPSGSP*PSQAHT
Trigger: AGTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGG...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTTCCTCTGCACGCCCTTaGGGTCCGAGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTSSARP*GPSGSP
Trigger: AGGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGA...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAATCCTCTGCACGCCCTTaGGGTCCGAGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: AHWSARQAEGLWMWGTRKSSARP*GPSGSP
Trigger: AGGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGA...TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCACGGGCACGGATCCTCTaGACGCCCTTGCGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPRARIL*TPLRSE
Trigger: CTCGGACCGCAAGGGCGTGCAGAGGATCCGTGCCCG...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGATGGCCTCTGTGTaGTTGGTCACGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQGMASV*LVTDTD
Trigger: ATCTGTGTCCGTGACCAAGCACACAGAGGCCATCCC...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGTCTGGCTCCGGATCTTaGCCAGCTCCGTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPASGSGS*PAPCAG
Trigger: GCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGA...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCGCTCGGGCTCGACTaGCGCCATCTGGCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFPLGLD*RHLAPD
Trigger: ATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGG...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp TATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTACCGCTCGGGCTCGACTaGCGCCATCTGGCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: YFSTKQQVSRWVQGPLLLPLGLD*RHLAPD
Trigger: ATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGG...TAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAATGGCGTGGGACAGCTaGCGTCCAAACTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPMAWDS*RPNSSS
Trigger: GCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCAT...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp ACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCGAGATGGTGAACTCGTaGAAAAGGCAGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TVRNLRMSVVSGTRDAGGEMVNS*KRQEPA
Trigger: TGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTC...GCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGAGATGGTGAACTCGTaGAAAAGGCAGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQEMVNS*KRQEPA
Trigger: TGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTC...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGACCCGGGACAGAGCCTaGAGGTCGGTGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPATRDRA*RSVSNT
Trigger: CGTGTTCGACACCGACCTGCAGGCTCTGTCCCGGGT...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTTCCTTCCGCATCAGCTaGTTGATGACCGTGTTACAG +
Preference number: 4 (lower is better)
Translates to: GRGWQVGPLRGRPGGSVTSFRIS*LMTVLQ
Trigger: CTGTAACACGGTCATCAAGCAGCTGATGCGGAAGGA...AGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAGAGGGCGGGTGGGCGTaGAGTACACGGACATGGATT +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPEGGWA*STRTWI
Trigger: AATCCATGTCCGTGTACTGCACGCCCACCCGCCCTC...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTGAGGGCGGGTGGGCGTaGAGTACACGGACATGGATT +
Preference number: 4 (lower is better)
Translates to: HGAHWSARQAEGLWMWGTEGGWA*STRTWI
Trigger: AATCCATGTCCGTGTACTGCACGCCCACCCGCCCTC...AGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCGTACTGCACAAACTTaGTGCAGTCGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGRTAQT*CSRPAP
Trigger: TGGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGGCGGGTCCAGCATaGCTACGCAGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPAAGPA*LRSPRR
Trigger: CCTTCGTGGGCTGCGTAGGCATGCTGGACCCGCCGC...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp AACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCAAAGATGCCAAGCCTaGGGCAGATGGCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: NLRMSVVSGTRDAGGKLDQRCQA*GRWPRQ
Trigger: CTGCCGTGGCCATCTGCCGCAGGCTTGGCATCTTTG...GTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACAAAGATGCCAAGCCTaGGGCAGATGGCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPQRCQA*GRWPRQ
Trigger: CTGCCGTGGCCATCTGCCGCAGGCTTGGCATCTTTG...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CAGCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCACTCGTGATTTGGGGGTGGCCGTGTCCCCAAAGATaGCAAGCCTGCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: QLPNKGEQAPAALVIWGWPCPQR*QACGRW
Trigger: CCATCTGCCGCAGGCTTGGCATCTTTGGGGACACGG...CCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTGGCCCGTGTAGGCCTTaGCCGCCACGTCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCGPCRP*PPRLPC
Trigger: ACACGGAAGACGTGGCGGGCAAGGCCTACACGGGCC...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp AGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCAGGGCCCGTGTAGGCCTTaGCCGCCACGTCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RELPRRVQETGITDLPGQGPCRP*PPRLPC
Trigger: ACACGGAAGACGTGGCGGGCAAGGCCTACACGGGCC...CTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGACCCTTCACCCGCCCGGGCCCTGCACATATAAACAGAAGCAGCCTCGAGCTGCAGGTTCTCCACGATaGGGGACTTGTGTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LTLHPPGPCTYKQKQPRAAGSPR*GTCVRA
Trigger: AGCCCGCACACAAGTCCCGCATCGTGGAGAACCTGC...AGCTCGAGGCTGCTTCTGTTTATATGTGCAGGGCCCGGGCGGGTGAAGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGTTTCTTCAGGGCTGGTaGGTCGTTCACTCCATCGCC +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVFLQGW*VVHSIA
Trigger: GGCGATGGAGTGAACGACGCACCAGCCCTGAAGAAA...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCGGGCAGGCCCAGAATTaGCGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSGQAQN*REEDAD
Trigger: GTCTGCATCTTCCTCACGGCAATTCTGGGCCTGCCC...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGACACCTCACAGTCGATaGCGGCAAAGAGCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKTPHSR*RQRAGC
Trigger: ACAACCCGCTCTTTGCCGGCATCGACTGTGAGGTGT...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGAAGCAGAGAATCTCTaGAGGCACCAGACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: WSQVPGTRVASWTSAWQTEAENL*RHQTPC
Trigger: GCAGGGAGTCTGGTGCCTGCAGAGATTCTCTGCTTC...GGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAAGAAGCAGAGAATCTCTaGAGGCACCAGACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRPGGSVTLNISRAQDGEEAENL*RHQTPC
Trigger: GCAGGGAGTCTGGTGCCTGCAGAGATTCTCTGCTTC...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCCTGACAGCGAGACGATaGTGTGTCCCTGGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLLTARR*CVPGPG
Trigger: ACCGGGGCCAGGGACACAGCATCGTCTCGCTGTCAG...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570845.5
CDS-3UTR CCA 90 bp AACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCACTCGGGAGCTCGTTaGGGCCGTAGCGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: NLYFSTKQQVSRWVQGPLHSGAR*GRSAPA
Trigger: CGCGGGAGCGCTACGGCCCCAACGAGCTCCCGAGTG...GAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCACACTCGGGAGCTCGTTaGGGCCGTAGCGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: AHINRSSLELSGADFVEAHSGAR*GRSAPA
Trigger: CGCGGGAGCGCTACGGCCCCAACGAGCTCCCGAGTG...TGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GGACATCCTCGCTCCGCCCTCCTGCCGGCTCCTTGTGTCCGTCTCTCTGACCCTTGGCCTCTGTGTGCTTaGTCACGGACACAGATTCAC +
Preference number: 4 (lower is better)
Translates to: GHPRSALLPAPCVRLSDPWPLCA*SRTQIH
Trigger: GTGAATCTGTGTCCGTGACCAAGCACACAGAGGCCA...AGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGGATGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGCTCTGGGGTCTGGGATaGCCTCTGTGTGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: VRNLRMSVVSGTRDAGGKLWGLG*PLCAWS
Trigger: TGACCAAGCACACAGAGGCCATCCCAGACCCCAGAG...CTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTATCACAGAGATGGCGTaGGACAGCTGCCGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGITEMA*DSCRPN
Trigger: GTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGAT...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTCAAGCCTGCGGCAGATaGCCACGGCAGTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: QEPEDVGGLRYQGRGWQVQACGR*PRQCLC
Trigger: ACAAAGGCACTGCCGTGGCCATCTGCCGCAGGCTTG...AACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTTCTCTGCCGCCGACTTaGCCACGGCCGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPSLPPT*PRPCLS
Trigger: GCTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGA...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGACAAGGCCATGGTGGTaGGGAAGCGTGACTCGAACA +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARTRPWW*GSVTRT
Trigger: TGTTCGAGTCACGCTTCCCCACCACCATGGCCTTGT...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTACAAGGCCATGGTGGTaGGGAAGCGTGACTCGAACA +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGTRPWW*GSVTRT
Trigger: TGTTCGAGTCACGCTTCCCCACCACCATGGCCTTGT...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAAACAAGGCCATGGTGGTaGGGAAGCGTGACTCGAACA +
Preference number: 4 (lower is better)
Translates to: GRPGGSVTLNISRAQDGETRPWW*GSVTRT
Trigger: TGTTCGAGTCACGCTTCCCCACCACCATGGCCTTGT...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCAGCACCACCACCCACTaGCGCCCGCTCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSSTTTH*RPLSGV
Trigger: GACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCT...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTACAGGCAGAGATATCTaGAGCACCACCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGTGRDI*STTTHW
Trigger: CCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGT...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGACAGGCAGAGATATCTaGAGCACCACCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGTGRDI*STTTHW
Trigger: CCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGT...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGACAGGCAGAGATATCTaGAGCACCACCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARTGRDI*STTTHW
Trigger: CCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGT...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAAGACAGGCGTGCATGTaGTTCCGGGACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQRQACM*FRDRYL
Trigger: CAAGTACCTGTCCCGGAACCACATGCACGCCTGTCT...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGGAGCAGGCCAGAAGGAAGTaGGGACAGAGACCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EAASSSREPTLWKQSGVEQARRK*GQRPQD
Trigger: GTCCTGGGGTCTCTGTCCCCACTTCCTTCTGGCCTG...CTCCACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGAACATGGAGCCCATTaGTCTGCAAGGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGEHGAH*SARQAE
Trigger: CTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTC...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGAACATGGAGCCCATTaGTCTGCAAGGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LRGRPGGSVTLNISRAQDEHGAH*SARQAE
Trigger: CTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTC...GTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GATCCCCCAGGGCTGACCCAGTCCCAGACCAGGCACGAAGAGAGAGGTCAGAGCGAACATGGAGCCCATTaGTCTGCAAGGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DPPGLTQSQTRHEERGQSEHGAH*SARQAE
Trigger: CTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTC...GCTCTGACCTCTCTCTTCGTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTCCTGCCGGGGGCTACAGAACATaGAGCCCATTGGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RLSRLVSRERTSSLRPPAGGYRT*SPLVCK
Trigger: CTTGCAGACCAATGGGCTCCATGTTCTGTAGCCCCC...GGCAGGAGGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGTCATTTCTTCCGGTGTaGTCTGGGGTCCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWSFLPV*SGVQEV
Trigger: CACCTCTTGGACCCCAGACCACACCGGAAGAAATGA...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352011.7
CDS-3UTR CCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAACCCAGCGCTCACTTCTaGCTCATTTCTTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQPSAHF*LISSGV
Trigger: CACACCGGAAGAAATGAGCCAGAAGTGAGCGCTGGG...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352011.7
CDS-3UTR TCA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCCGCTTTGCCCGATGTaGTATTGGTGCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGPLCPM*YWCQKT
Trigger: TGTTTTCTGGCACCAATATCACATCGGGCAAAGCGG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCTGGTACCCGAGATGGTaGACTCGTGCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSWYPRW*TRAKGR
Trigger: CCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCA...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCGCTCCCCACGCGGACTaGGCTACAGCGCTCGATCAC +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSAPHAD*ATALDH
Trigger: GTGATCGAGCGCTGTAGCTCAGTCCGCGTGGGGAGC...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp ACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGGCCACGGCCGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: TYKQKQPRALGSRLCGSRGHGRA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACGGCCGTGGCC...TCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp GCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCACCAGGTCTGGCGGGTTaGAGCCCAGAGCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AHINRSSLELSGADFVEAPGLAG*SPEPWQ
Trigger: CTGCCACGGCTCTGGGCTTCAACCCGCCAGACCTGG...TGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGGGGGCAGCTTCTCCATaGTGTCCAGGTCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLGAASP*CPGLAG
Trigger: ACCCGCCAGACCTGGACATCATGGAGAAGCTGCCCC...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp TTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAAGAGGGGCAGCTTCTCCATaGTGTCCAGGTCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: FSTKQQVSRWVQGPLLLRGAASP*CPGLAG
Trigger: ACCCGCCAGACCTGGACATCATGGAGAAGCTGCCCC...TCTTAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGTCTCCGAGACGCTGTTaGGGGCATTGCACATTTCAA +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWSPRRC*GHCTFQ
Trigger: TTGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGA...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTCCTCATCCAGCAGGATaGCAGGCAGAGATATCTGGA +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGPHPAG*QAEISG
Trigger: TCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGG...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp ACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCCCTCATCCAGCAGGATaGCAGGCAGAGATATCTGGA +
Preference number: 4 (lower is better)
Translates to: TVRNLRMSVVSGTRDAGGPHPAG*QAEISG
Trigger: TCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGG...GCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp TCCAGCCAGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCCCTCATCCAGCAGGATaGCAGGCAGAGATATCTGGA +
Preference number: 4 (lower is better)
Translates to: SSQAFPTCLPGKDILAPPPHPAG*QAEISG
Trigger: TCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGG...GGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTTCCGGGACAGGTACTTaGGGGCCTCATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTSGTGT*GPHPAG
Trigger: TCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGA...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCCCTGCGAGACTGTCCTaGGAAGGCCTGGATAAAGAC +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSPARLS*EGLDKD
Trigger: GTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGG...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000570845.5
CDS-3UTR TCA 90 bp AGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTCCTGCCTCCTCTCATCTGATATaGCGTGTTCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RLSRLVSRERTSSLRPPASSHLI*RVPPAG
Trigger: CCCTGCTGGAGGAACACGTCATATCAGATGAGAGGA...GGCAGGAGGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp AGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGCCGAGCGGATCACCTTaGCCATCTCAGGCTCATACT +
Preference number: 4 (lower is better)
Translates to: SWTSAWQTGRQCDSEHLPPSGSP*PSQAHT
Trigger: AGTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGG...CGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGATTGCCCAGCTCCGTGTaGAGGCCGGTGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: TYKQKQPRALGSRLCGSRLPSSV*RPVATA
Trigger: GGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAA...TCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp AACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCCGCTCGGGCTCGACTaGCGCCATCTGGCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: NLYFSTKQQVSRWVQGPLPLGLD*RHLAPD
Trigger: ATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGG...GAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGCAAACTCGTCCAGCTTaGGCTGCAGCGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLQTRPA*AAAASA
Trigger: AGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTG...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTATGGCGTGGGACAGCTaGCGTCCAAACTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTMAWDS*RPNSSS
Trigger: GCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCAT...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp ACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGATGGCGTGGGACAGCTaGCGTCCAAACTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TEAASSSREPTLWKQSGVMAWDS*RPNSSS
Trigger: GCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCAT...CACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCGTTCTTGCGTGCCATaGGCCGCGTGCCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFRSCVP*AACPVP
Trigger: TGGCACTGGGCACGCGGCGCATGGCACGCAAGAACG...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGATGGCGTTCTTGCGTaGCATGCGCCGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVDGVLA*HAPRAQ
Trigger: CTGGGCACGCGGCGCATGGCACGCAAGAACGCCATC...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGATGGCGTTCTTGCGTaGCATGCGCCGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPDGVLA*HAPRAQ
Trigger: CTGGGCACGCGGCGCATGGCACGCAAGAACGCCATC...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCCAGAGCCGAGTCGTTaGACAGGGCGCAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQPEPSR*TGRRWS
Trigger: CGACCATCTGCGCCCTGTGCAACGACTCGGCTCTGG...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTACCCGGGACAGAGCCTaGAGGTCGGTGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCTRDRA*RSVSNT
Trigger: CGTGTTCGACACCGACCTGCAGGCTCTGTCCCGGGT...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGACTGCACAAACTTGCTaGAGTCGTCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWTAQTC*SRPAPC
Trigger: ACATGGAGCTGGACGACTGCAGCAAGTTTGTGCAGT...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCACTGCACAAACTTGCTaGAGTCGTCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GRTLGWVEGRHGQEPEDVTAQTC*SRPAPC
Trigger: ACATGGAGCTGGACGACTGCAGCAAGTTTGTGCAGT...GACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGCGTACTGCACAAACTTaGTGCAGTCGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARRTAQT*CSRPAP
Trigger: TGGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACG...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAAGGTCCGTCTCGTACTaGACAAACTTGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQRSVSY*TNLLQS
Trigger: CGACTGCAGCAAGTTTGTGCAGTACGAGACGGACCT...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGAGGTCCGTCTCGTACTaGACAAACTTGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARRSVSY*TNLLQS
Trigger: CGACTGCAGCAAGTTTGTGCAGTACGAGACGGACCT...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGCTACAGAACATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGACAAAGATGCCAAGCCTaGGGCAGATGGCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: GLQNMEPIGLQGRLRGFGQRCQA*GRWPRQ
Trigger: CTGCCGTGGCCATCTGCCGCAGGCTTGGCATCTTTG...TCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTCTGTAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCAAAGATGCCAAGCCTaGGGCAGATGGCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTQRCQA*GRWPRQ
Trigger: CTGCCGTGGCCATCTGCCGCAGGCTTGGCATCTTTG...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCCCGTGTCCCCAAAGATaGCAAGCCTGCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLPCPQR*QACGRW
Trigger: CCATCTGCCGCAGGCTTGGCATCTTTGGGGACACGG...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCACAGGCCTGGCGCTGCTaGTCGGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTG...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp TATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTACAGGCCTGGCGCTGCTaGTCGGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: YFSTKQQVSRWVQGPLLLQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTG...TAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGGCCTGGCGCTGCTaGTCGGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTG...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp ACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGACGGCAGGCCTGGCGCTaGTGCTCGGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TYKQKQPRALGSRLCGSRRQAWR*CSGLRS
Trigger: TGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTGCCG...TCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CTACAGAACATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGATGCGGGACTTGTGTaGGGGCTCCACGCGGGCGAA +
Preference number: 4 (lower is better)
Translates to: LQNMEPIGLQGRLRGFGCDAGLV*GLHAGE
Trigger: TTCGCCCGCGTGGAGCCCGCACACAAGTCCCGCATC...ACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGATGCGGGACTTGTGTaGGGGCTCCACGCGGGCGAA +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPDAGLV*GLHAGE
Trigger: TTCGCCCGCGTGGAGCCCGCACACAAGTCCCGCATC...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTGCAGGTTCTCCACGATaGGGGACTTGTGTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTAGSPR*GTCVRA
Trigger: AGCCCGCACACAAGTCCCGCATCGTGGAGAACCTGC...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp AGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGTTTCTTCAGGGCTGGTaGGTCGTTCACTCCATCGCC +
Preference number: 4 (lower is better)
Translates to: SWTSAWQTGRQCDSEHLPFLQGW*VVHSIA
Trigger: GGCGATGGAGTGAACGACGCACCAGCCCTGAAGAAA...CGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTGGCGATGCCGATCTCTaGTTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: HGAHWSARQAEGLWMWGTGDADL*FLQGWC
Trigger: GCACCAGCCCTGAAGAAAGCAGAGATCGGCATCGCC...AGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCTGAGCCCATGGCGATaGCGATCTCTGCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGLSPWR*RSLLSS
Trigger: TGAAGAAAGCAGAGATCGGCATCGCCATGGGCTCAG...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGCTGAGCCCATGGCGATaGCGATCTCTGCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARLSPWR*RSLLSS
Trigger: TGAAGAAAGCAGAGATCGGCATCGCCATGGGCTCAG...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGAACACCTCACAGTCGATaGCGGCAAAGAGCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: SAWQTGRQCDSEHLPSSGTPHSR*RQRAGC
Trigger: ACAACCCGCTCTTTGCCGGCATCGACTGTGAGGTGT...TCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACACCTCACAGTCGATaGCGGCAAAGAGCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSTPHSR*RQRAGC
Trigger: ACAACCCGCTCTTTGCCGGCATCGACTGTGAGGTGT...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp AACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACTGCCTACTCCAGGCCTaGGAGACTGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NLRMSVVSGTRDAGGKLDCLLQA*ETVLRR
Trigger: CCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCA...GTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR GCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGAGGTGGTCAGCGGCTaGCTACTCCAGGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPEVVSG*LLQACE
Trigger: CTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTC...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp AGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGAGTCCTCCGTCAGTaGAGAGGCACCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: SWTSAWQTGRQCDSEHLPRVLRQ*RGTSHQ
Trigger: TTGGTGACTGGTGCCTCTGCACTGACGGAGGACTCT...CGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp AACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCACCCGCCCGGGCCCTaGACATATAAACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NLRMSVVSGTRDAGGKLDHPPGP*TYKQKQ
Trigger: CTGCTTCTGTTTATATGTGCAGGGCCCGGGCGGGTG...GTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGGCAAGTTGGACCTCTaGGTGGCAGACCGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVGKLDL*VADRAA
Trigger: TGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCC...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCAGAGGCCCCCAGCTGTaGAGACAGCGCGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSRGPQL*RQRGGR
Trigger: GCGGCCGCCGCGCTGTCTGCACAGCTGGGGGCCTCT...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCAGGGACAATCCTTGGTaGAGGTTTCTGCTACCCCTC +
Preference number: 4 (lower is better)
Translates to: WSQVPGTRVASWTSAWQTRDNPW*RFLLPL
Trigger: GAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT...GGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTAGGCCATGTCCGTGCTaGGACCTTACCCGACGGCAG +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCRPCPC*DLTRRQ
Trigger: CTGCCGTCGGGTAAGGTCCCAGCACGGACATGGCCT...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCACCACGAAGGCGGTCGTaGTCTCCTCGCCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPPRRRS*SPRPPR
Trigger: TCGAGGAGGGCGAGGAGACCACGACCGCCTTCGTGG...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTGCCACACGCCCACAATaGCGTTGGCCACGAGGATCA +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTATRPQ*RWPRGS
Trigger: TGATCCTCGTGGCCAACGCCATTGTGGGCGTGTGGC...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGTGGCCTCTGTGTGCTTaGTCACGGACACAGATTCAC +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKWPLCA*SRTQIH
Trigger: GTGAATCTGTGTCCGTGACCAAGCACACAGAGGCCA...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TCAGAGCCGGTAAGAAGGACCCCCAGAGTCCTCCGTCAGTGCAGAGGCACCAGTCTCTGGGGTCTGGGATaGCCTCTGTGTGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SEPVRRTPRVLRQCRGTSLWGLG*PLCAWS
Trigger: TGACCAAGCACACAGAGGCCATCCCAGACCCCAGAG...ACTGGTGCCTCTGCACTGACGGAGGACTCTGGGGGTCCTTCTTACCGGCTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp AACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGGGGTCTGGGATaGCCTCTGTGTGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: NLRMSVVSGTRDAGGKLDLWGLG*PLCAWS
Trigger: TGACCAAGCACACAGAGGCCATCCCAGACCCCAGAG...GTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGGGGTCTGGGATaGCCTCTGTGTGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPLWGLG*PLCAWS
Trigger: TGACCAAGCACACAGAGGCCATCCCAGACCCCAGAG...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTCGACTGCCGCCATCTaGCTCCGGATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLSTAAI*LRILPS
Trigger: GCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGA...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCGACTGCCGCCATCTaGCTCCGGATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCSTAAI*LRILPS
Trigger: GCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGA...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGGCCGGGTCGGCGAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTCGCCGACCCGGC...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGGCAGGCTTCGCACGATaGCGTTCTTGCGTGCCATGC +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAAGFAR*RSCVPC
Trigger: GCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGC...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGTGCAGTACACGGACATaGATTTCCGGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARCSTRT*ISGLGR
Trigger: TCTCCCGAGACCGGAAATCCATGTCCGTGTACTGCA...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGTGCAGTACACGGACATaGATTTCCGGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVCSTRT*ISGLGR
Trigger: TCTCCCGAGACCGGAAATCCATGTCCGTGTACTGCA...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GATCCCCCAGGGCTGACCCAGTCCCAGACCAGGCACGAAGAGAGAGGTCAGAGCTGCAGTACACGGACATaGATTTCCGGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: DPPGLTQSQTRHEERGQSCSTRT*ISGLGR
Trigger: TCTCCCGAGACCGGAAATCCATGTCCGTGTACTGCA...GCTCTGACCTCTCTCTTCGTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCACCAGGATCTGCTCCCTaGAGGTGGGGGTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPPGSAP*RWGSGV
Trigger: CACCCCTGACCCCCACCTCCAGGGAGCAGATCCTGG...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCCCAGGATCTGCTCCCTaGAGGTGGGGGTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVPGSAP*RWGSGV
Trigger: CACCCCTGACCCCCACCTCCAGGGAGCAGATCCTGG...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCACACAAACCACCAGGTaGCGGCAGCCACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: MGTISLRYTPETPLCSQRTQTTR*RQPLWP
Trigger: TGGCCACAGTGGCTGCCGCCACCTGGTGGTTTGTGT...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACAAGGCCATGGTGGTaGGGAAGCGTGACTCGAACA +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSTRPWW*GSVTRT
Trigger: TGTTCGAGTCACGCTTCCCCACCACCATGGCCTTGT...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCCGGACAAGGCCATGGTaGTGGGGAAGCGTGACTCGA +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLRTRPW*WGSVTR
Trigger: TCGAGTCACGCTTCCCCACCACCATGGCCTTGTCCG...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGGCACGGACAAGGCCATaGTGGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAARTRP*WWGSVT
Trigger: AGTCACGCTTCCCCACCACCATGGCCTTGTCCGTGC...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTGCACGGACAAGGCCATaGTGGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTARTRP*WWGSVT
Trigger: AGTCACGCTTCCCCACCACCATGGCCTTGTCCGTGC...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCCTGGCGCCCGCTCAGTaGGGTCACCTGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLLAPAQ*GHLENE
Trigger: CTCATTTTCCAGGTGACCCCACTGAGCGGGCGCCAG...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCTGGCGCCCGCTCAGTaGGGTCACCTGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPALAPAQ*GHLENE
Trigger: CTCATTTTCCAGGTGACCCCACTGAGCGGGCGCCAG...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCCTGGCGCCCGCTCAGTaGGGTCACCTGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: MGTISLRYTPETPLCSQRLAPAQ*GHLENE
Trigger: CTCATTTTCCAGGTGACCCCACTGAGCGGGCGCCAG...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAAGCACCACCACCCACTaGCGCCCGCTCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AHINRSSLELSGADFVEASTTTH*RPLSGV
Trigger: GACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCT...TGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACAGGCAGAGATATCTaGAGCACCACCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSTGRDI*STTTHW
Trigger: CCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGT...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAGACAGGCGTGCATGTaGTTCCGGGACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSRQACM*FRDRYL
Trigger: CAAGTACCTGTCCCGGAACCACATGCACGCCTGTCT...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000570845.5
CDS-3UTR CCA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGTGTCCTGAGAAGGCCTaGATAAAGACAGGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWCPEKA*IKTGVH
Trigger: ATGCACGCCTGTCTTTATCCAGGCCTTCTCAGGACA...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GTCCTCCGTCAGTGCAGAGGCACCAGTCACCAAGTGAACGTCCAGCTTCCGAACCAACCCGGTGTGGTCTaGGGTCCAAGAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: VLRQCRGTSHQVNVQLPNQPGVV*GPRGGQ
Trigger: CTGACCACCTCTTGGACCCCAGACCACACCGGGTTG...GTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGCCTCTGCACTGACGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309890.11
CDS-3UTR CCA 90 bp GGCGCCACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGCCCAGCGCTCACTTCTaGCTCATTTCTTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GATVRNLRMSVVSGTRDAPSAHF*LISSKR
Trigger: CCTCTTTGAAGAAATGAGCCAGAAGTGAGCGCTGGG...CGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR CCA 90 bp CAGCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCACTCGTGATTTGGGGGTGGTTTGTGGAAGCAGAGTaGAGTGGAGGGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QLPNKGEQAPAALVIWGWFVEAE*SGGGCP
Trigger: TGGGCAGCCCCCTCCACTCCACTCTGCTTCCACAAA...CCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCAGACGCGGGTGGCAAGTTaGACCTCTGCGTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: RELPRRVQETGITDLPGQTRVAS*TSAWQT
Trigger: GGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGT...CTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCTCATACCAGGGACGCGGGTaGCAAGTTGGACCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GTISLRYTPETPLCSQRSYQGRG*QVGPLR
Trigger: ACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA...TGAGCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309890.11
CDS-3UTR CCA 90 bp TGCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCGGCCGCACACTGGGCTaGGTAGAAGGGCGCCACGGT +
Preference number: 4 (lower is better)
Translates to: CTYKQKQPRALGSRLCGSGRTLG*VEGRHG
Trigger: ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC...GCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTCCCAGCGCTCACTTCTaGCTCATTTCTTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGPSAHF*LISSLL
Trigger: AAGCAGGGAAGAAATGAGCCAGAAGTGAGCGCTGGG...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359983.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCGGCCCCGGTGTGGTCTaGGGTCCAAGAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSGPGVV*GPRGGQ
Trigger: CTGACCACCTCTTGGACCCCAGACCACACCGGGGCC...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570845.5
CDS-3UTR TCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGCCGCTTTGCCCGATGTaGTATTGGTGCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKPLCPM*YWCQKT
Trigger: TGTTTTCTGGCACCAATATCACATCGGGCAAAGCGG...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGGGGCCACGGCGATCTTaGAGTAGTAGACAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQGPRRS*SSRQRH
Trigger: GTGGCGCTGTCTACTACTTCAAGATCGCCGTGGCCC...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTCCGCAGCGCACAGGCTaGTCCCCCTGCCGCACTTCG +
Preference number: 4 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSPQRTG*SPCRTS
Trigger: CGAAGTGCGGCAGGGGGATCAGCCTGTGCGCTGCGG...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGCTCCCCACGCGGACTaGGCTACAGCGCTCGATCAC +
Preference number: 4 (lower is better)
Translates to: AHINRSSLELSGADFVEAAPHAD*ATALDH
Trigger: GTGATCGAGCGCTGTAGCTCAGTCCGCGTGGGGAGC...TGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGGGTGGTGGGGAAGCGTaGCTCGAACACCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLGGGEA*LEHLTV
Trigger: GACTGTGAGGTGTTCGAGTCACGCTTCCCCACCACC...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGTCTCCGAGACGCTGTTaGGGGCATTGCACATTTCAA +
Preference number: 4 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRSPRRC*GHCTFQ
Trigger: TTGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGA...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAATCTCCGAGACGCTGTTaGGGGCATTGCACATTTCAA +
Preference number: 4 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQSPRRC*GHCTFQ
Trigger: TTGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGA...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR TCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCTCATCCAGCAGGATaGCAGGCAGAGATATCTGGA +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETPHPAG*QAEISG
Trigger: TCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGG...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTCCGGGACAGGTACTTaGGGGCCTCATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLSGTGT*GPHPAG
Trigger: TCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGA...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCGGGGATGGCCATTCTaGCCTCGGGCCTGTCATTTA +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTRGWPF*PRACHL
Trigger: TAAATGACAGGCCCGAGGTCAGAATGGCCATCCCCG...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCGGGGATGGCCATTCTaGCCTCGGGCCTGTCATTTA +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPARGWPF*PRACHL
Trigger: TAAATGACAGGCCCGAGGTCAGAATGGCCATCCCCG...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp AACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCTTGTGTCCGTCTCTCTaGCCCTTCACCCGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: NLYFSTKQQVSRWVQGPLLCPSL*PFTRPG
Trigger: GCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAA...GAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTACAGAACATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTTCCTCTGCACGCCCTTaGGGTCCGAGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: LQNMEPIGLQGRLRGFGCSSARP*GPSGSP
Trigger: AGGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGA...ACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCTCCTCTGCACGCCCTTaGGGTCCGAGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSSSARP*GPSGSP
Trigger: AGGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGA...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTGGGATGGCCTCTGTGTaGTTGGTCACGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: HGAHWSARQAEGLWMWGTGMASV*LVTDTD
Trigger: ATCTGTGTCCGTGACCAAGCACACAGAGGCCATCCC...AGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTACAAACTCGTCCAGCTTaGGCTGCAGCGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: YFSTKQQVSRWVQGPLLLQTRPA*AAAASA
Trigger: AGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTG...TAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGAGCCGAGTCGTTaGACAGGGCGCAGATGGTCG +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFPEPSR*TGRRWS
Trigger: CGACCATCTGCGCCCTGTGCAACGACTCGGCTCTGG...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGTCCTTCCGCATCAGCTaGTTGATGACCGTGTTACAG +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKSFRIS*LMTVLQ
Trigger: CTGTAACACGGTCATCAAGCAGCTGATGCGGAAGGA...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGTCCTTCCGCATCAGCTaGTTGATGACCGTGTTACAG +
Preference number: 4 (lower is better)
Translates to: SFIRRDPVGKWASVVARVSFRIS*LMTVLQ
Trigger: CTGTAACACGGTCATCAAGCAGCTGATGCGGAAGGA...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp AATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGTGGGGAGGGGGGAGGGCGGGTGGGCGTaGAGTACACGGACATGGATT +
Preference number: 4 (lower is better)
Translates to: NQPSLVTSFRLMGVVGRGEGGWA*STRTWI
Trigger: AATCCATGTCCGTGTACTGCACGCCCACCCGCCCTC...CCCCCTCCCCACGACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCATCTTTGCCAGGATCTaGTCCCTGGAGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLIFARI*SLEVGV
Trigger: GACCCCCACCTCCAGGGAGCAGATCCTGGCAAAGAT...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTATCTTTGCCAGGATCTaGTCCCTGGAGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTIFARI*SLEVGV
Trigger: GACCCCCACCTCCAGGGAGCAGATCCTGGCAAAGAT...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTACTGCACAAACTTGCTaGAGTCGTCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGTAQTC*SRPAPC
Trigger: ACATGGAGCTGGACGACTGCAGCAAGTTTGTGCAGT...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCGTACTGCACAAACTTaGTGCAGTCGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETRTAQT*CSRPAP
Trigger: TGGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACG...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCAAAGATGCCAAGCCTaGGGCAGATGGCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQQRCQA*GRWPRQ
Trigger: CTGCCGTGGCCATCTGCCGCAGGCTTGGCATCTTTG...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTGCAGGTTCTCCACGATaGGGGACTTGTGTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCAGSPR*GTCVRA
Trigger: AGCCCGCACACAAGTCCCGCATCGTGGAGAACCTGC...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGATCTCGTTAAAGGACTaGAGGTTCTCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: LSFIRRDPVGKWASVVARISLKD*RFSTMR
Trigger: CCGCATCGTGGAGAACCTGCAGTCCTTTAACGAGAT...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGATCTCGTTAAAGGACTaGAGGTTCTCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKISLKD*RFSTMR
Trigger: CCGCATCGTGGAGAACCTGCAGTCCTTTAACGAGAT...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTGGCGATGCCGATCTCTaGTTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTGDADL*FLQGWC
Trigger: GCACCAGCCCTGAAGAAAGCAGAGATCGGCATCGCC...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCTGAGCCCATGGCGATaGCGATCTCTGCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETLSPWR*RSLLSS
Trigger: TGAAGAAAGCAGAGATCGGCATCGCCATGGGCTCAG...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCGGGCAGGCCCAGAATTaGCGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: MGTISLRYTPETPLCSQRGQAQN*REEDAD
Trigger: GTCTGCATCTTCCTCACGGCAATTCTGGGCCTGCCC...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTTGCCTACTCCAGGCCTaGGAGACTGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTCLLQA*ETVLRR
Trigger: CCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCA...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp GTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGAGGGACAATCCTTGGTaGAGGTTTCTGCTACCCCTC +
Preference number: 4 (lower is better)
Translates to: VRNLRMSVVSGTRDAGGKRDNPW*RFLLPL
Trigger: GAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT...CTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGACAGCGAGACGATaGTGTGTCCCTGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTLTARR*CVPGPK
Trigger: CTTTGGGCCAGGGACACAGCATCGTCTCGCTGTCAG...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359983.7
CDS-3UTR CCA 90 bp AGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCAGGCCACACGCCCACAATaGCGTTGGCCACGAGGATCA +
Preference number: 4 (lower is better)
Translates to: RELPRRVQETGITDLPGQATRPQ*RWPRGS
Trigger: TGATCCTCGTGGCCAACGCCATTGTGGGCGTGTGGC...CTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCCTCTGGGGTCTGGGATaGCCTCTGTGTGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: MGTISLRYTPETPLCSQRLWGLG*PLCAWS
Trigger: TGACCAAGCACACAGAGGCCATCCCAGACCCCAGAG...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp AACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACATCACAGAGATGGCGTaGGACAGCTGCCGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: NLRMSVVSGTRDAGGKLDITEMA*DSCRPN
Trigger: GTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGAT...GTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCGCCGGGTCGGCGAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTCGCCGACCCGGC...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGCCGGGTCGGCGAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTCGCCGACCCGGC...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAAGCCAGGAGCCACCGTaGGCCGGGTCGGCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GTILGAGFCYPSLVFAKVSQEPP*AGSAKW
Trigger: CCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCT...TACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCTGGCGGCAGCCACTGTaGCCAGGCCTACGTACACTC +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFWRQPL*PGLRTL
Trigger: GAGTGTACGTAGGCCTGGCCACAGTGGCTGCCGCCA...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp TTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAAGAACACAAACCACCAGGTaGCGGCAGCCACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FSTKQQVSRWVQGPLLLRTQTTR*RQPLWP
Trigger: TGGCCACAGTGGCTGCCGCCACCTGGTGGTTTGTGT...TCTTAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGACACAAACCACCAGGTaGCGGCAGCCACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQTQTTR*RQPLWP
Trigger: TGGCCACAGTGGCTGCCGCCACCTGGTGGTTTGTGT...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCACGGACAAGGCCATGGTaGTGGGGAAGCGTGACTCGA +
Preference number: 4 (lower is better)
Translates to: QGTSQESPGDRNYRPPRPRTRPW*WGSVTR
Trigger: TCGAGTCACGCTTCCCCACCACCATGGCCTTGTCCG...TGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCAGAAGGAAGTGGGGCACGGACAAGGCCATaGTGGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: QESPGDRNYRPPRPEGSGARTRP*WWGSVT
Trigger: AGTCACGCTTCCCCACCACCATGGCCTTGTCCGTGC...CCCACTTCCTTCTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAACAGGCAGAGATATCTaGAGCACCACCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPTGRDI*STTTHW
Trigger: CCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGT...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp TGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACAGACAGGCGTGCATGTaGTTCCGGGACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: WVEGRHGQEPEDVGGLRYRQACM*FRDRYL
Trigger: CAAGTACCTGTCCCGGAACCACATGCACGCCTGTCT...GTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR CCA 90 bp TCCAGCCAGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTGTCCTGAGAAGGCCTaGATAAAGACAGGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: SSQAFPTCLPGKDILAPPCPEKA*IKTGVH
Trigger: ATGCACGCCTGTCTTTATCCAGGCCTTCTCAGGACA...GGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR CCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCACGCGGGTGGCAAGTTaGACCTCTGCGTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFTRVAS*TSAWQT
Trigger: GGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGT...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCATACCAGGGACGCGGGTaGCAAGTTGGACCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: QGTSQESPGDRNYRPPRPYQGRG*QVGPLR
Trigger: ACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA...TGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp TCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACCGCTTTGCCCGATGTaGTATTGGTGCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: SAWQTGRQCDSEHLPSSGPLCPM*YWCQKT
Trigger: TGTTTTCTGGCACCAATATCACATCGGGCAAAGCGG...TCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCGGGCCACGGCGATCTTaGAGTAGTAGACAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFGPRRS*SSRQRH
Trigger: GTGGCGCTGTCTACTACTTCAAGATCGCCGTGGCCC...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGTGGTACCCGAGATGGTaGACTCGTGCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAWYPRW*TRAKGR
Trigger: CCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCA...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGGGCCCAGAATTGCCGTaGGGAAGATGCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQGPELP*GRCRRP
Trigger: AGGTCGTCTGCATCTTCCTCACGGCAATTCTGGGCC...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACCTCATCCAGCAGGATaGCAGGCAGAGATATCTGGA +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPPHPAG*QAEISG
Trigger: TCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGG...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCTCCGGGACAGGTACTTaGGGGCCTCATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSSGTGT*GPHPAG
Trigger: TCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGA...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGTGGGCACCATCAGTCTaGGGTACACACCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQWAPSV*GTHRRL
Trigger: GAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCA...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp CCTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGCATCTTCCTCTCATCTaGTATGACGTGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPPLRFSHWPPRTCEREEHLPLI*YDVFLQ
Trigger: CTGGAGGAACACGTCATATCAGATGAGAGGAAGATG...CTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTGCTTCCTCCCTCTCTaGGCAGCTCTGACAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCCFLPL*AALTAR
Trigger: TCTCGCTGTCAGAGCTGCTCAGAGAGGGAGGAAGCA...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp GCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAACCGAGCGGATCACCTTaGCCATCTCAGGCTCATACT +
Preference number: 4 (lower is better)
Translates to: AHWSARQAEGLWMWGTRKPSGSP*PSQAHT
Trigger: AGTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGG...TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAAGGTCCGTCTCGTACTaGACAAACTTGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GGGEHMGTISLRYTPETPRSVSY*TNLLQS
Trigger: CGACTGCAGCAAGTTTGTGCAGTACGAGACGGACCT...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCGTGTCCCCAAAGATaGCAAGCCTGCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFPCPQR*QACGRW
Trigger: CCATCTGCCGCAGGCTTGGCATCTTTGGGGACACGG...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTTTCTTCAGGGCTGGTaGGTCGTTCACTCCATCGCC +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLFLQGW*VVHSIA
Trigger: GGCGATGGAGTGAACGACGCACCAGCCCTGAAGAAA...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGTTTCTTCAGGGCTGGTaGGTCGTTCACTCCATCGCC +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAFLQGW*VVHSIA
Trigger: GGCGATGGAGTGAACGACGCACCAGCCCTGAAGAAA...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGGGCGATGCCGATCTCTaGTTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQGDADL*FLQGWC
Trigger: GCACCAGCCCTGAAGAAAGCAGAGATCGGCATCGCC...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTCTGAGCCCATGGCGATaGCGATCTCTGCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QEPEDVGGLRYQGRGWQVLSPWR*RSLLSS
Trigger: TGAAGAAAGCAGAGATCGGCATCGCCATGGGCTCAG...AACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GTCCTCCGTCAGTGCAGAGGCACCAGTCACCAAGTGAACGTCCAGCTTCCGAACACACCTCACAGTCGATaGCGGCAAAGAGCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: VLRQCRGTSHQVNVQLPNTPHSR*RQRAGC
Trigger: ACAACCCGCTCTTTGCCGGCATCGACTGTGAGGTGT...GTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGCCTCTGCACTGACGGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTGCCTACTCCAGGCCTaGGAGACTGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCCLLQA*ETVLRR
Trigger: CCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCA...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000570845.5
CDS-3UTR GCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCCTCCTGGGCCAGAGCTaGAGAGCAGGGAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVLLGQS*RAGNFP
Trigger: TGGGAAGTTCCCTGCTCTGCAGCTCTGGCCCAGGAG...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTAGGCACCAGACTCCCTaGCTCCCCCACTGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPRHQTP*LPHCVS
Trigger: AGAAACGCAGTGGGGGAGGCAGGGAGTCTGGTGCCT...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAAGGCACCAGACTCCCTaGCTCCCCCACTGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: YFSTKQQVSRWVQGPLLLRHQTP*LPHCVS
Trigger: AGAAACGCAGTGGGGGAGGCAGGGAGTCTGGTGCCT...TAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGATTCACCCGTCAGGATaGACTGGTCCACTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQIHPSG*TGPLAA
Trigger: CGCTGCGAGTGGACCAGTCCATCCTGACGGGTGAAT...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCAGGCTTCGCACGATaGCGTTCTTGCGTGCCATGC +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPAGFAR*RSCVPC
Trigger: GCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGC...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGACATAGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCATGTCCTCCTTCCTTaGGGGCGCGTCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RHRDNPWCRFLLPLASFCHVLLP*GRVPGG
Trigger: GCCACCCGGGACGCGCCCCCAAGGAAGGAGGACATG...GCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCACAAGCCTGCGGCAGATaGCCACGGCAGTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPQACGR*PRQCLC
Trigger: ACAAAGGCACTGCCGTGGCCATCTGCCGCAGGCTTG...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTTCTCTGCCGCCGACTTaGCCACGGCCGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSSLPPT*PRPCLS
Trigger: GCTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGA...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTCGGACAAGGCCATGGTaGTGGGGAAGCGTGACTCGA +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPRTRPW*WGSVTR
Trigger: TCGAGTCACGCTTCCCCACCACCATGGCCTTGTCCG...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTTGTCCTGAGAAGGCCTaGATAAAGACAGGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: GGGGEHMGTISLRYTPETCPEKA*IKTGVH
Trigger: ATGCACGCCTGTCTTTATCCAGGCCTTCTCAGGACA...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000570845.5
CDS-3UTR CCA 90 bp AGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGCAGGCCAGAAGGAAGTaGGGACAGAGACCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RAGNFPGESRRQELQTSQQARRK*GQRPQD
Trigger: GTCCTGGGGTCTCTGTCCCCACTTCCTTCTGGCCTG...CTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GTCCTCCGTCAGTGCAGAGGCACCAGTCACCAAGTGAACGTCCAGCTTCCGAACGAGGGGCTTTGGATGTaGGGGACTAGGAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: VLRQCRGTSHQVNVQLPNEGLWM*GTRKGM
Trigger: CATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTC...GTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGCCTCTGCACTGACGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTGAGGGGCTTTGGATGTaGGGGACTAGGAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTEGLWM*GTRKGM
Trigger: CATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTC...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAACAGGCTGAGGGGCTTTaGATGTGGGGGACTAGGAAA +
Preference number: 4 (lower is better)
Translates to: AHWSARQAEGLWMWGTRKQAEGL*MWGTRK
Trigger: TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTG...TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp AGACATAGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCGCTCCCCACGCGGACTaGGCTACAGCGCTCGATCAC +
Preference number: 4 (lower is better)
Translates to: RHRDNPWCRFLLPLASFCAPHAD*ATALDH
Trigger: GTGATCGAGCGCTGTAGCTCAGTCCGCGTGGGGAGC...GCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCGGCCCAGAATTGCCGTaGGGAAGATGCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSGPELP*GRCRRP
Trigger: AGGTCGTCTGCATCTTCCTCACGGCAATTCTGGGCC...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGGCCCAGAATTGCCGTaGGGAAGATGCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPGPELP*GRCRRP
Trigger: AGGTCGTCTGCATCTTCCTCACGGCAATTCTGGGCC...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAACCCTGAGTCCATCTCCGAGACGCTGTTaGGGGCATTGCACATTTCAA +
Preference number: 4 (lower is better)
Translates to: RQCDSEHLPSSGRGTLSPSPRRC*GHCTFQ
Trigger: TTGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGA...TGGACTCAGGGTTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCCTCATCCAGCAGGATaGCAGGCAGAGATATCTGGA +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAPHPAG*QAEISG
Trigger: TCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGG...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp TCAGTCTGCACACGCTCTAGGAGTGGCCAAGACATAGGGACAATCCTTGGTGCATCCGGGACAGGTACTTaGGGGCCTCATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVCTRSRSGQDIGTILGASGTGT*GPHPAG
Trigger: TCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGA...TGCACCAAGGATTGTCCCTATGTCTTGGCCACTCCTAGAGCGTGTGCAGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCTGGGCACCATCAGTCTaGGGTACACACCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFWAPSV*GTHRRL
Trigger: GAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCA...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCATGGGCACCATCAGTCTaGGGTACACACCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPWAPSV*GTHRRL
Trigger: GAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCA...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp GGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTACCAGATGGCCCCTTCTaGTCCCCCAGGGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: GTILGAGFCYPSLVFAKVPDGPF*SPRADP
Trigger: TGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTGG...TACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp AATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGTGGGGAGGGGGGGGATGGCCTCTGTGTaGTTGGTCACGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: NQPSLVTSFRLMGVVGRGGMASV*LVTDTD
Trigger: ATCTGTGTCCGTGACCAAGCACACAGAGGCCATCCC...CCCCCTCCCCACGACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTGGGATGGCCTCTGTGTaGTTGGTCACGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCGMASV*LVTDTD
Trigger: ATCTGTGTCCGTGACCAAGCACACAGAGGCCATCCC...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTATCTTTGCCAGGATCTaGTCCCTGGAGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPIFARI*SLEVGV
Trigger: GACCCCCACCTCCAGGGAGCAGATCCTGGCAAAGAT...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCATCTTTGCCAGGATCTaGTCCCTGGAGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSIFARI*SLEVGV
Trigger: GACCCCCACCTCCAGGGAGCAGATCCTGGCAAAGAT...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTTCTTCAGGGCTGGTaGGTCGTTCACTCCATCGCC +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLFLQGW*VVHSIA
Trigger: GGCGATGGAGTGAACGACGCACCAGCCCTGAAGAAA...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCGGGCAGGCCCAGAATTaGCGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSGQAQN*REEDAD
Trigger: GTCTGCATCTTCCTCACGGCAATTCTGGGCCTGCCC...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTACACCTCACAGTCGATaGCGGCAAAGAGCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCTPHSR*RQRAGC
Trigger: ACAACCCGCTCTTTGCCGGCATCGACTGTGAGGTGT...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GAGCTGCAGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCCGGATCTCTGGGTATaGTGCCAGCTCCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ELQSRELPRRVQETGITDPDLWV*CQLRLL
Trigger: AAGAAGCCGGAGCTGGCAGCATACCCAGAGATCCGG...GTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCTGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTCCGGATCTCTGGGTATaGTGCCAGCTCCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPPDLWV*CQLRLL
Trigger: AAGAAGCCGGAGCTGGCAGCATACCCAGAGATCCGG...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp AATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGTGGGGAGGGGGAGAGTCCTCCGTCAGTaGAGAGGCACCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: NQPSLVTSFRLMGVVGRGRVLRQ*RGTSHQ
Trigger: TTGGTGACTGGTGCCTCTGCACTGACGGAGGACTCT...CCCCCTCCCCACGACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCCTTGGTGCAGGTTTCTaGTACCCCTCGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSLGAGF*YPSLVF
Trigger: AAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAG...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp GTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACATAAAATCATCAGTCTaGACACGCTCTAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VVSGTRDAGGKLDLCVADIKSSV*TRSRSG
Trigger: GCCACTCCTAGAGCGTGTGCAGACTGATGATTTTAT...GTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGACATAGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCCACGAAGGCGGTCGTaGTCTCCTCGCCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: RHRDNPWCRFLLPLASFCPRRRS*SPRPPR
Trigger: TCGAGGAGGGCGAGGAGACCACGACCGCCTTCGTGG...GCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGATTCACCCGTCAGGATaGACTGGTCCACTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: RAGNFPGESRRQELQTSQIHPSG*TGPLAA
Trigger: CGCTGCGAGTGGACCAGTCCATCCTGACGGGTGAAT...CTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAATTCACCCGTCAGGATaGACTGGTCCACTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPIHPSG*TGPLAA
Trigger: CGCTGCGAGTGGACCAGTCCATCCTGACGGGTGAAT...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGATCACAGAGATGGCGTaGGACAGCTGCCGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HMGTISLRYTPETPLCSQITEMA*DSCRPN
Trigger: GTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGAT...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGTGCAGTACACGGACATaGATTTCCGGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPACSTRT*ISGLGR
Trigger: TCTCCCGAGACCGGAAATCCATGTCCGTGTACTGCA...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp TCAGTCTGCACACGCTCTAGGAGTGGCCAAGACATAGGGACAATCCTTGGTGCACTGGCGCCCGCTCAGTaGGGTCACCTGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: SVCTRSRSGQDIGTILGALAPAQ*GHLENE
Trigger: CTCATTTTCCAGGTGACCCCACTGAGCGGGCGCCAG...TGCACCAAGGATTGTCCCTATGTCTTGGCCACTCCTAGAGCGTGTGCAGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTGACCCGGTGGGCAAGTaGGCGAGTGTGGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSDPVGK*ASVVAR
Trigger: CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTC...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp AGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGTTTGTGGAAGCAGAGTaGAGTGGAGGGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RAGNFPGESRRQELQTSQFVEAE*SGGGCP
Trigger: TGGGCAGCCCCCTCCACTCCACTCTGCTTCCACAAA...CTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp AATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGTGGGGAGGGGGGGGGGCTACAGAACATaGAGCCCATTGGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: NQPSLVTSFRLMGVVGRGGGYRT*SPLVCK
Trigger: CTTGCAGACCAATGGGCTCCATGTTCTGTAGCCCCC...CCCCCTCCCCACGACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATT
57% GC, longest homopolymer 10 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAAGGGATGTGAGTCTGGGGGCTACAGAACATaGAGCCCATTGGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QGRLRGFGCGGLGKGCESGGYRT*SPLVCK
Trigger: CTTGCAGACCAATGGGCTCCATGTTCTGTAGCCCCC...AGACTCACATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGCCCAGCGCTCACTTCTaGCTCATTTCGTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLPSAHF*LISCMW
Trigger: CCACATGCACGAAATGAGCCAGAAGTGAGCGCTGGG...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397043.7
CDS-3UTR TCA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCCCGCTTTGCCCGATGTaGTATTGGTGCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: GGEHMGTISLRYTPETPLPLCPM*YWCQKT
Trigger: TGTTTTCTGGCACCAATATCACATCGGGCAAAGCGG...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCTGGTACCCGAGATGGTaGACTCGTGCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFWYPRW*TRAKGR
Trigger: CCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCA...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp ACAACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCGGCCCAGAATTGCCGTaGGGAAGATGCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: TTFISLPNSRSAGGYRARGPELP*GRCRRP
Trigger: AGGTCGTCTGCATCTTCCTCACGGCAATTCTGGGCC...GCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCTCAGCTGGTAGAAGTTaGTGTGAGGTCCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFSAGRS*CEVPRR
Trigger: ACGCCGAGGGACCTCACATCAACTTCTACCAGCTGA...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR TCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGTCTCCGAGACGCTGTTaGGGGCATTGCACATTTCAA +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPASPRRC*GHCTFQ
Trigger: TTGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGA...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp CAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCACCTCATCCAGCAGGATaGCAGGCAGAGATATCTGGA +
Preference number: 4 (lower is better)
Translates to: QGTSQESPGDRNYRPPRPPHPAG*QAEISG
Trigger: TCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGG...TGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCACCGAGCGGATCACCTTaGCCATCTCAGGCTCATACT +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPPSGSP*PSQAHT
Trigger: AGTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGG...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCGGGATGGCCTCTGTGTaGTTGGTCACGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSGMASV*LVTDTD
Trigger: ATCTGTGTCCGTGACCAAGCACACAGAGGCCATCCC...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGGGATGGCCTCTGTGTaGTTGGTCACGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVGMASV*LVTDTD
Trigger: ATCTGTGTCCGTGACCAAGCACACAGAGGCCATCCC...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCGCGCCGCGTGCCCAGTaGCAGGCATGTAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSAPRAQ*QACSDD
Trigger: GTCATCACTACATGCCTGGCACTGGGCACGCGGCGC...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCGAGATGGTGAACTCGTaGAAAAGGCAGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSEMVNS*KRQEPA
Trigger: TGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTC...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCGAGATGGTGAACTCGTaGAAAAGGCAGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFEMVNS*KRQEPA
Trigger: TGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTC...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTTCCTTCCGCATCAGCTaGTTGATGACCGTGTTACAG +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTSFRIS*LMTVLQ
Trigger: CTGTAACACGGTCATCAAGCAGCTGATGCGGAAGGA...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTACTGCACAAACTTGCTaGAGTCGTCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTTAQTC*SRPAPC
Trigger: ACATGGAGCTGGACGACTGCAGCAAGTTTGTGCAGT...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGACTGCACAAACTTGCTaGAGTCGTCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPATAQTC*SRPAPC
Trigger: ACATGGAGCTGGACGACTGCAGCAAGTTTGTGCAGT...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTATCTCGTTAAAGGACTaGAGGTTCTCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: RRRTHGHHQSEVHTGDSTISLKD*RFSTMR
Trigger: CCGCATCGTGGAGAACCTGCAGTCCTTTAACGAGAT...AGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGATCTCGTTAAAGGACTaGAGGTTCTCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAISLKD*RFSTMR
Trigger: CCGCATCGTGGAGAACCTGCAGTCCTTTAACGAGAT...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp AACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTTGGTGCAGGTTTCTaGTACCCCTCGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: NLRMSVVSGTRDAGGKLDLGAGF*YPSLVF
Trigger: AAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAG...GTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTGGCCTCTGTGTGCTTaGTCACGGACACAGATTCAC +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCWPLCA*SRTQIH
Trigger: GTGAATCTGTGTCCGTGACCAAGCACACAGAGGCCA...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp AGACATAGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCTCGACTGCCGCCATCTaGCTCCGGATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RHRDNPWCRFLLPLASFCSTAAI*LRILPS
Trigger: GCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGA...GCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTTCGACTGCCGCCATCTaGCTCCGGATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSSTAAI*LRILPS
Trigger: GCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGA...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp ACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGCAGGCTTCGCACGATaGCGTTCTTGCGTGCCATGC +
Preference number: 4 (lower is better)
Translates to: TYKQKQPRALGSRLCGSRAGFAR*RSCVPC
Trigger: GCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGC...TCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCACAAGGCCATGGTGGTaGGGAAGCGTGACTCGAACA +
Preference number: 4 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVTRPWW*GSVTRT
Trigger: TGTTCGAGTCACGCTTCCCCACCACCATGGCCTTGT...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCACAGGCAGAGATATCTaGAGCACCACCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFTGRDI*STTTHW
Trigger: CCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGT...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CCA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCAGTTGGACCTCTGCGTaGCAGACCGGGCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSSWTSA*QTGRQC
Trigger: ACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTACAGAACATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGAGGGGCTTTGGATGTaGGGGACTAGGAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: LQNMEPIGLQGRLRGFGCEGLWM*GTRKGM
Trigger: CATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTC...ACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTCCCAGCGCTCACTTCTaGCTCATTTCTTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: GEHMGTISLRYTPETPLCPSAHF*LISSLL
Trigger: AAGCAGGGAAGAAATGAGCCAGAAGTGAGCGCTGGG...ACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359983.7
ENST00000570845.5
CDS-3UTR TCA 90 bp ACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCAGGGGCAGCTTCTCCATaGTGTCCAGGTCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: TILGAGFCYPSLVFAKVAGAASP*CPGLAG
Trigger: ACCCGCCAGACCTGGACATCATGGAGAAGCTGCCCC...TGCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp TGCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCTCAGCTGGTAGAAGTTaGTGTGAGGTCCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: CTYKQKQPRALGSRLCGSSAGRS*CEVPRR
Trigger: ACGCCGAGGGACCTCACATCAACTTCTACCAGCTGA...GCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTGGTGGTGGGGAAGCGTaGCTCGAACACCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSGGGEA*LEHLTV
Trigger: GACTGTGAGGTGTTCGAGTCACGCTTCCCCACCACC...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTCTCCGAGACGCTGTTaGGGGCATTGCACATTTCAA +
Preference number: 4 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLSPRRC*GHCTFQ
Trigger: TTGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGA...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR TCA 90 bp TCAGTCTGCACACGCTCTAGGAGTGGCCAAGACATAGGGACAATCCTTGGTGCAGCACCAGTCACCAAGTaGACGTCCAGCTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: SVCTRSRSGQDIGTILGAAPVTK*TSSFRT
Trigger: TGTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGC...TGCACCAAGGATTGTCCCTATGTCTTGGCCACTCCTAGAGCGTGTGCAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR GCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTCGTACTGCACAAACTTaGTGCAGTCGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPRTAQT*CSRPAP
Trigger: TGGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACG...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GTGCCCTTGGGGAATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCAGGTCCGTCTCGTACTaGACAAACTTGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: VPLGNQPSLVTSFRLMGVRSVSY*TNLLQS
Trigger: CGACTGCAGCAAGTTTGTGCAGTACGAGACGGACCT...GACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCAAGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTCCGTGTCCCCAAAGATaGCAAGCCTGCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSPCPQR*QACGRW
Trigger: CCATCTGCCGCAGGCTTGGCATCTTTGGGGACACGG...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCAGGTTCTCCACGATaGGGGACTTGTGTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GTILGAGFCYPSLVFAKVAGSPR*GTCVRA
Trigger: AGCCCGCACACAAGTCCCGCATCGTGGAGAACCTGC...TACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAAGGGATGTGAGTCTATCTCGTTAAAGGACTaGAGGTTCTCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: QGRLRGFGCGGLGKGCESISLKD*RFSTMR
Trigger: CCGCATCGTGGAGAACCTGCAGTCCTTTAACGAGAT...AGACTCACATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTCTGAGCCCATGGCGATaGCGATCTCTGCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPLSPWR*RSLLSS
Trigger: TGAAGAAAGCAGAGATCGGCATCGCCATGGGCTCAG...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCACTGAGCCCATGGCGATaGCGATCTCTGCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPLSPWR*RSLLSS
Trigger: TGAAGAAAGCAGAGATCGGCATCGCCATGGGCTCAG...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR GCA 90 bp TCAGAGCCGGTAAGAAGGACCCCCAGAGTCCTCCGTCAGTGCAGAGGCACCAGTATAAAATCATCAGTCTaGACACGCTCTAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SEPVRRTPRVLRQCRGTSIKSSV*TRSRSG
Trigger: GCCACTCCTAGAGCGTGTGCAGACTGATGATTTTAT...ACTGGTGCCTCTGCACTGACGGAGGACTCTGGGGGTCCTTCTTACCGGCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCATGGCCTCTGTGTGCTTaGTCACGGACACAGATTCAC +
Preference number: 4 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPWPLCA*SRTQIH
Trigger: GTGAATCTGTGTCCGTGACCAAGCACACAGAGGCCA...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CCA 90 bp GGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTACAACCCGGTGTGGTCTaGGGTCCAAGAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GTILGAGFCYPSLVFAKVQPGVV*GPRGGQ
Trigger: CTGACCACCTCTTGGACCCCAGACCACACCGGGTTG...TACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR CCA 90 bp AGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCAGCCCAGCGCTCACTTCTaGCTCATTTCTTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RELPRRVQETGITDLPGQPSAHF*LISSKR
Trigger: CCTCTTTGAAGAAATGAGCCAGAAGTGAGCGCTGGG...CTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309890.11
CDS-3UTR TCA 90 bp ACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCAGGGCCACGGCGATCTTaGAGTAGTAGACAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: TILGAGFCYPSLVFAKVAGPRRS*SSRQRH
Trigger: GTGGCGCTGTCTACTACTTCAAGATCGCCGTGGCCC...TGCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp ACAACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTCTCATCTGATATaGCGTGTTCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TTFISLPNSRSAGGYRARSSHLI*RVPPAG
Trigger: CCCTGCTGGAGGAACACGTCATATCAGATGAGAGGA...GCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTATCCTTCCGCATCAGCTaGTTGATGACCGTGTTACAG +
Preference number: 4 (lower is better)
Translates to: YFSTKQQVSRWVQGPLLLSFRIS*LMTVLQ
Trigger: CTGTAACACGGTCATCAAGCAGCTGATGCGGAAGGA...TAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp TATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAACTGCACAAACTTGCTaGAGTCGTCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: YFSTKQQVSRWVQGPLLLTAQTC*SRPAPC
Trigger: ACATGGAGCTGGACGACTGCAGCAAGTTTGTGCAGT...TAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTATCTCGTTAAAGGACTaGAGGTTCTCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: PLFLYQTAGQQVGTGPAPISLKD*RFSTMR
Trigger: CCGCATCGTGGAGAACCTGCAGTCCTTTAACGAGAT...AGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCGGCGATGCCGATCTCTaGTTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSGDADL*FLQGWC
Trigger: GCACCAGCCCTGAAGAAAGCAGAGATCGGCATCGCC...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp AGACATAGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCACCCGCCCGGGCCCTaGACATATAAACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RHRDNPWCRFLLPLASFCHPPGP*TYKQKQ
Trigger: CTGCTTCTGTTTATATGTGCAGGGCCCGGGCGGGTG...GCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGCACTCGGGAGCTCGTTaGGGCCGTAGCGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMHSGAR*GRSAPA
Trigger: CGCGGGAGCGCTACGGCCCCAACGAGCTCCCGAGTG...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTATTCACCCGTCAGGATaGACTGGTCCACTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSIHPSG*TGPLAA
Trigger: CGCTGCGAGTGGACCAGTCCATCCTGACGGGTGAAT...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp ACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAATCACAGAGATGGCGTaGGACAGCTGCCGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: TYKQKQPRALGSRLCGSRITEMA*DSCRPN
Trigger: GTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGAT...TCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCATGCAGTACACGGACATaGATTTCCGGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: AHINRSSLELSGADFVEACSTRT*ISGLGR
Trigger: TCTCCCGAGACCGGAAATCCATGTCCGTGTACTGCA...TGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp ACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCAACACAAACCACCAGGTaGCGGCAGCCACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TILGAGFCYPSLVFAKVATQTTR*RQPLWP
Trigger: TGGCCACAGTGGCTGCCGCCACCTGGTGGTTTGTGT...TGCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCTGTCCTGAGAAGGCCTaGATAAAGACAGGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: EHMGTISLRYTPETPLCSCPEKA*IKTGVH
Trigger: ATGCACGCCTGTCTTTATCCAGGCCTTCTCAGGACA...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000570845.5
CDS-3UTR CCA 90 bp CATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCTCACTTCTCATAGGGACAATCCTTaGTGCAGGTTTCTGCTACCC +
Preference number: 4 (lower is better)
Translates to: HQSEVHTGDSTLFPALTSHRDNP*CRFLLP
Trigger: GGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATG...AGAAGTGAGCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309890.11
CDS-3UTR CCA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCCTGCGTTTCTCTCACTaGCCGCCCAGAACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSLRFSH*PPRTCE
Trigger: CTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAG...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp TCAGTCTGCACACGCTCTAGGAGTGGCCAAGACATAGGGACAATCCTTGGTGCACCCAGCGCTCACTTCTaGCTCATTTCTTCGTGCATG +
Preference number: 4 (lower is better)
Translates to: SVCTRSRSGQDIGTILGAPSAHF*LISSCM
Trigger: CATGCACGAAGAAATGAGCCAGAAGTGAGCGCTGGG...TGCACCAAGGATTGTCCCTATGTCTTGGCCACTCCTAGAGCGTGTGCAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397041.8
CDS-3UTR CCA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCTCATTTCGTGCATGTaGTTCCGGGACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFLISCM*FRDRYL
Trigger: CAAGTACCTGTCCCGGAACCACATGCACGAAATGAG...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397043.7
CDS-3UTR TCA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCTCAGCTGGTAGAAGTTaGTGTGAGGTCCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSSAGRS*CEVPRR
Trigger: ACGCCGAGGGACCTCACATCAACTTCTACCAGCTGA...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCAAAAGCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCACGTTCTTGCGTGCCATaGGCCGCGTGCCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AKAELREKFCPSEAIFLSRSCVP*AACPVP
Trigger: TGGCACTGGGCACGCGGCGCATGGCACGCAAGAACG...TGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGCTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCGAGATGGTGAACTCGTaGAAAAGGCAGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSEMVNS*KRQEPA
Trigger: TGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTC...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCAAAAGCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCAGAGGTGGTCAGCGGCTaGCTACTCCAGGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: AKAELREKFCPSEAIFLSEVVSG*LLQACE
Trigger: CTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTC...TGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGCTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR CCA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTCAGGCTGAGGGGCTTTaGATGTGGGGGACTAGGAAA +
Preference number: 4 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSQAEGL*MWGTRK
Trigger: TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTG...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp AGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGATTTCTTCGTGCATGTaGTTCCGGGACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RAGNFPGESRRQELQTSQISSCM*FRDRYL
Trigger: CAAGTACCTGTCCCGGAACCACATGCACGAAGAAAT...CTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397041.8
CDS-3UTR GCA 90 bp GCAAAAGCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCAGCGCCGCGTGCCCAGTaGCAGGCATGTAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: AKAELREKFCPSEAIFLSAPRAQ*QACSDD
Trigger: GTCATCACTACATGCCTGGCACTGGGCACGCGGCGC...TGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGCTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTACGTACTGCACAAACTTaGTGCAGTCGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTILGAGFCYPSLVFAKVRTAQT*CSRPAP
Trigger: TGGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACG...TACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCAGGTCCGTCTCGTACTaGACAAACTTGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSRSVSY*TNLLQS
Trigger: CGACTGCAGCAAGTTTGTGCAGTACGAGACGGACCT...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCACTTGGTGCAGGTTTCTaGTACCCCTCGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: AHINRSSLELSGADFVEALGAGF*YPSLVF
Trigger: AAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAG...TGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATAGGCCATGTCCGTGCTaGGACCTTACCCGACGGCAG +
Preference number: 4 (lower is better)
Translates to: AELREKFCPSEAIFLSSDRPCPC*DLTRRQ
Trigger: CTGCCGTCGGGTAAGGTCCCAGCACGGACATGGCCT...ATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CCA 90 bp GGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTATGCAGTACACGGACATaGATTTCCGGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GTILGAGFCYPSLVFAKVCSTRT*ISGLGR
Trigger: TCTCCCGAGACCGGAAATCCATGTCCGTGTACTGCA...TACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp ACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCATCCTCTCATCTGATATaGCGTGTTCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TILGAGFCYPSLVFAKVASSHLI*RVPPAG
Trigger: CCCTGCTGGAGGAACACGTCATATCAGATGAGAGGA...TGCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGGGGAGGGAGAGCGGGTaGCCTTGGGGAATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMGRESG*PWGISH
Trigger: ATGGCTGATTCCCCAAGGGCACCCGCTCTCCCTCCC...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GCAAAAGCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCAGCAGGCTTCGCACGATaGCGTTCTTGCGTGCCATGC +
Preference number: 4 (lower is better)
Translates to: AKAELREKFCPSEAIFLSAGFAR*RSCVPC
Trigger: GCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGC...TGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGCTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp CTTGATTTACATATAAAATCATCAGTCTGCACACGCTCTAGGAGTGGCCAAGACACACAAACCACCAGGTaGCGGCAGCCACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LDLHIKSSVCTRSRSGQDTQTTR*RQPLWP
Trigger: TGGCCACAGTGGCTGCCGCCACCTGGTGGTTTGTGT...GTCTTGGCCACTCCTAGAGCGTGTGCAGACTGATGATTTTATATGTAAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCTGTCCTGAGAAGGCCTaGATAAAGACAGGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSCPEKA*IKTGVH
Trigger: ATGCACGCCTGTCTTTATCCAGGCCTTCTCAGGACA...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR GCA 90 bp ACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCATCCTTCCGCATCAGCTaGTTGATGACCGTGTTACAG +
Preference number: 4 (lower is better)
Translates to: TILGAGFCYPSLVFAKVASFRIS*LMTVLQ
Trigger: CTGTAACACGGTCATCAAGCAGCTGATGCGGAAGGA...TGCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGCAAGCCTGCGGCAGATaGCCACGGCAGTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMQACGR*PRQCLC
Trigger: ACAAAGGCACTGCCGTGGCCATCTGCCGCAGGCTTG...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATTGGTACCCGAGATGGTaGACTCGTGCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AELREKFCPSEAIFLSSDWYPRW*TRAKGR
Trigger: CCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCA...ATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGGGCCCAGAATTGCCGTaGGGAAGATGCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMGPELP*GRCRRP
Trigger: AGGTCGTCTGCATCTTCCTCACGGCAATTCTGGGCC...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATTTTCTTCAGGGCTGGTaGGTCGTTCACTCCATCGCC +
Preference number: 4 (lower is better)
Translates to: AELREKFCPSEAIFLSSDFLQGW*VVHSIA
Trigger: GGCGATGGAGTGAACGACGCACCAGCCCTGAAGAAA...ATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp GCAAAAGCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCAGAAGCAGAGAATCTCTaGAGGCACCAGACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: AKAELREKFCPSEAIFLSEAENL*RHQTPC
Trigger: GCAGGGAGTCTGGTGCCTGCAGAGATTCTCTGCTTC...TGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGCTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGTCAGCTGGTAGAAGTTaGTGTGAGGTCCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMSAGRS*CEVPRR
Trigger: ACGCCGAGGGACCTCACATCAACTTCTACCAGCTGA...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGGCACCAGTCACCAAGTaGACGTCCAGCTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMAPVTK*TSSFRT
Trigger: TGTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGC...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR TCA 90 bp CTTGATTTACATATAAAATCATCAGTCTGCACACGCTCTAGGAGTGGCCAAGACTCTCCGAGACGCTGTTaGGGGCATTGCACATTTCAA +
Preference number: 4 (lower is better)
Translates to: LDLHIKSSVCTRSRSGQDSPRRC*GHCTFQ
Trigger: TTGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGA...GTCTTGGCCACTCCTAGAGCGTGTGCAGACTGATGATTTTATATGTAAATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CCA 90 bp GCAAAAGCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCACATAGGGACAATCCTTaGTGCAGGTTTCTGCTACCC +
Preference number: 4 (lower is better)
Translates to: AKAELREKFCPSEAIFLSHRDNP*CRFLLP
Trigger: GGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATG...TGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGCTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR TCA 90 bp GAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATATGCATCTTCCTCTCATCTaGTATGACGTGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ELREKFCPSEAIFLSSDMHLPLI*YDVFLQ
Trigger: CTGGAGGAACACGTCATATCAGATGAGAGGAAGATG...CATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR GCA 90 bp CTTGATTTACATATAAAATCATCAGTCTGCACACGCTCTAGGAGTGGCCAAGACATAAAATCATCAGTCTaGACACGCTCTAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LDLHIKSSVCTRSRSGQDIKSSV*TRSRSG
Trigger: GCCACTCCTAGAGCGTGTGCAGACTGATGATTTTAT...GTCTTGGCCACTCCTAGAGCGTGTGCAGACTGATGATTTTATATGTAAATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS GCA 90 bp AGTGGCGCAGCACGTCGGCGGCCGGGAGCAGATGCGCCGCCTCCATaGCGCCCGCCCGGCCGTCTGCGCCGTCCGCACCGTCGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: SGAARRRPGADAPPP*RPPGRLRRPHRRGR
Trigger: GCGGCCTCGACGGTGCGGACGGCGCAGACGGCCGGGCGGGCGGCATGGAGGCGGCGCATCTGCTCCCGGCCGCCGACGTGCTGCGCCACT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 90 bp GCGGCGTCCGCTCGGGCTCGACTGCCGCCATCTGGCTCCGGATCTTaGCCAGCTCCGTGTGCAGGCCGGTGGCCACGGCCACACCCACCG +
Preference number: 5 (lower is better)
Translates to: AASARARLPPSGSGS*PAPCAGRWPRPHPP
Trigger: CGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGGACGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CCA 90 bp AGCTTGCGCTGCAGCGGCGTCCGCTCGGGCTCGACTGCCGCCATCTaGCTCCGGATCTTGCCCAGCTCCGTGTGCAGGCCGGTGGCCACG +
Preference number: 5 (lower is better)
Translates to: SLRCSGVRSGSTAAI*LRILPSSVCRPVAT
Trigger: CGTGGCCACCGGCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGGACGCCGCTGCAGCGCAAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CTGTGCAGACAGCGCGGCGGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCCAAACTCGTCCAGCTaGCGCTGCAGCGGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: LCRQRGGRTLGWVEGRHGPNSSS*RCSGVR
Trigger: GCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGG...ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTGTGCAGACAGCGCGGCGGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTATCTCTGCCGCCGACTaGGCCACGGCCGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LCRQRGGRTLGWVEGRHGISAAD*ATAVPE
Trigger: CTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGAT...ACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS GCA 90 bp GAGATGGCGTGGGACAGCTGCCGTCCAAACTCGTCCAGCTTGCGCTaGAGCGGCGTCCGCTCGGGCTCGACTGCCGCCATCTGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: EMAWDSCRPNSSSLR*SGVRSGSTAAIWLR
Trigger: CCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCATCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCCATGTCCTCCTTCCTaGGGGGCGCGTCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: FIRRDPVGKWASVVARVGPCPPS*GARPGW
Trigger: CCACCCGGGACGCGCCCCCAAGGAAGGAGGACATGG...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCCAAACTCGTCCAGCTaGCGCTGCAGCGGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: FIRRDPVGKWASVVARVGPNSSS*RCSGVR
Trigger: GCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGG...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCCATGTCCTCCTTCCTaGGGGGCGCGTCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGPCPPS*GARPGW
Trigger: CCACCCGGGACGCGCCCCCAAGGAAGGAGGACATGG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS GCA 90 bp GCTTCGCACGATGGCGTTCTTGCGTGCCATGCGCCGCGTGCCCAGTaGCAGGCATGTAGTGATGACAGCCGGGAGGCCCTCGGGGATGGC +
Preference number: 5 (lower is better)
Translates to: ASHDGVLACHAPRAQ*QACSDDSREALGDG
Trigger: GCCATCCCCGAGGGCCTCCCGGCTGTCATCACTACATGCCTGGCACTGGGCACGCGGCGCATGGCACGCAAGAACGCCATCGTGCGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp TACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTATGGCACTCTCGGCGTaGCGTTCCTGCCACACGCCC +
Preference number: 5 (lower is better)
Translates to: YQGRGWQVGPLRGRPGGSMALSA*RSCHTP
Trigger: GGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCAT...ACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGATCCTCTGCACGCCCTaGCGGTCCGAGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: FIRRDPVGKWASVVARVGILCTP*RSERIT
Trigger: GGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGAT...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTATCCTCTGCACGCCCTaGCGGTCCGAGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: YQGRGWQVGPLRGRPGGSILCTP*RSERIT
Trigger: GGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGAT...ACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGCCGCACACTGGGCTGGGTAGAAGGGCGCCACGGTCAGGAACCTGAGGATGTCCGCACGATGGCGTTCTaGCGTGCCATGCGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: GRTLGWVEGRHGQEPEDVRTMAF*RAMRRV
Trigger: CACGCGGCGCATGGCACGCAAGAACGCCATCGTGCG...GACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGCGCCACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGCGCACGATGGCGTTCTaGCGTGCCATGCGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: GATVRNLRMSVVSGTRDARTMAF*RAMRRV
Trigger: CACGCGGCGCATGGCACGCAAGAACGCCATCGTGCG...CGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAACCAAACTCGTCCAGCTaGCGCTGCAGCGGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQPNSSS*RCSGVR
Trigger: GCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGG...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGCCAAACTCGTCCAGCTaGCGCTGCAGCGGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRPNSSS*RCSGVR
Trigger: GCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGG...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCGCACGATGGCGTTCTaGCGTGCCATGCGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGRTMAF*RAMRRV
Trigger: CACGCGGCGCATGGCACGCAAGAACGCCATCGTGCG...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CAGATGGCCCCTTCTGATCCCCCAGGGCTGACCCAGTCCCAGACCAGGCACGAATCCACGATGCGGGACTaGTGTGCGGGCTCCACGCGG +
Preference number: 5 (lower is better)
Translates to: QMAPSDPPGLTQSQTRHESTMRD*CAGSTR
Trigger: CCGCGTGGAGCCCGCACACAAGTCCCGCATCGTGGA...TTCGTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCAGAAGGGGCCATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGTCCACGATGCGGGACTaGTGTGCGGGCTCCACGCGG +
Preference number: 5 (lower is better)
Translates to: SFIRRDPVGKWASVVARVSTMRD*CAGSTR
Trigger: CCGCGTGGAGCCCGCACACAAGTCCCGCATCGTGGA...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGATCTCTGCCGCCGACTaGGCCACGGCCGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGISAAD*ATAVPE
Trigger: CTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGAT...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAAATCTCTGCCGCCGACTaGGCCACGGCCGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GRPGGSVTLNISRAQDGEISAAD*ATAVPE
Trigger: CTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGAT...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS GCA 90 bp CAGGGTCTCCACGGACGGCAGGCTTCGCACGATGGCGTTCTTGCGTaGCATGCGCCGCGTGCCCAGTGCCAGGCATGTAGTGATGACAGC +
Preference number: 5 (lower is better)
Translates to: QGLHGRQASHDGVLA*HAPRAQCQACSDDS
Trigger: GCTGTCATCACTACATGCCTGGCACTGGGCACGCGGCGCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGCCGTCCGTGGAGACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 90 bp GCAGGTGAAGACAGTGAGGCAGTGTGGCCCAAGAGGTGCTCCCGTTaGTGGCCCAGTGAGCCCAGGTCCCCTGCAGTGCAAGACCCTGCG +
Preference number: 5 (lower is better)
Translates to: AGEDSEAVWPKRCSR*WPSEPRSPAVQDPA
Trigger: CGCAGGGTCTTGCACTGCAGGGGACCTGGGCTCACTGGGCCAGCAACGGGAGCACCTCTTGGGCCACACTGCCTCACTGTCTTCACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS CCA 90 bp GACGATGCTGTGTCCCTGGCCCAAAGAGGCCAACCCGGTGTGGTCTaGGGTCCAAGAGGTGGTCAGCGGCTGCCTACTCCAGGCCTGCGA +
Preference number: 5 (lower is better)
Translates to: DDAVSLAQRGQPGVV*GPRGGQRLPTPGLR
Trigger: TCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTCTTGGACCCCAGACCACACCGGGTTGGCCTCTTTGGGCCAGGGACACAGCATCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359983.7
CDS CCA 90 bp GGTGAAGACAGTGAGGCAGTGTGGCCCAAGAGGTGCTCCCGTTGCTaGCCCAGTGAGCCCAGGTCCCCTGCAGTGCAAGACCCTGCGGAC +
Preference number: 5 (lower is better)
Translates to: GEDSEAVWPKRCSRC*PSEPRSPAVQDPAD
Trigger: GTCCGCAGGGTCTTGCACTGCAGGGGACCTGGGCTCACTGGGCCAGCAACGGGAGCACCTCTTGGGCCACACTGCCTCACTGTCTTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS CCA 90 bp GAGGCAGGCTGGAGGCGGGACGGGGCCTCCCACTCACCGTGCATGTaGTTCCGGGACAGGTACTTGAGGGCCTCATCCAGCAGGATGACA +
Preference number: 5 (lower is better)
Translates to: EAGWRRDGASHSPCM*FRDRYLRASSSRMT
Trigger: TGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGGTGAGTGGGAGGCCCCGTCCCGCCTCCAGCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571245.5
CDS-3UTR CAA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGATGGCACTCTCGGCGTaGCGTTCCTGCCACACGCCC +
Preference number: 5 (lower is better)
Translates to: SFIRRDPVGKWASVVARVMALSA*RSCHTP
Trigger: GGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCAT...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGATGGCACTCTCGGCGTaGCGTTCCTGCCACACGCCC +
Preference number: 5 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKMALSA*RSCHTP
Trigger: GGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCAT...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGATCCTCTGCACGCCCTaGCGGTCCGAGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGILCTP*RSERIT
Trigger: GGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGAT...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACATCCTCTGCACGCCCTaGCGGTCCGAGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: LRGRPGGSVTLNISRAQDILCTP*RSERIT
Trigger: GGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGAT...GTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGCGCAGCGTGGTGGACTaGATCTCGATGAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGRSVVD*ISMRRR
Trigger: CCTCCGCCTCATCGAGATCAAGTCCACCACGCTGCG...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGTCCAGAGCCGAGTCGTaGCACAGGGCGCAGATGGTC +
Preference number: 5 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWSRAES*HRAQMV
Trigger: GACCATCTGCGCCCTGTGCAACGACTCGGCTCTGGA...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACCATGTCCTCCTTCCTaGGGGGCGCGTCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: GGGEHMGTISLRYTPETPPCPPS*GARPGW
Trigger: CCACCCGGGACGCGCCCCCAAGGAAGGAGGACATGG...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTGGAGAGCGGGTGCCCTaGGGGAATCAGCCATCCTTA +
Preference number: 5 (lower is better)
Translates to: GRGWQVGPLRGRPGGSVTGERVP*GNQPSL
Trigger: TAAGGATGGCTGATTCCCCAAGGGCACCCGCTCTCC...AGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS TCA 90 bp CCTGCCGCACTTCGCCCTCGGGGGTATACGTGGTACCCGAGATGGTaGACTCGTGCAAAAGGCAGGAGCCCGCATCGGCCTCGGCTACCA +
Preference number: 5 (lower is better)
Translates to: PAALRPRGYTWYPRW*TRAKGRSPHRPRLP
Trigger: TGGTAGCCGAGGCCGATGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCACGTATACCCCCGAGGGCGAAGTGCGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000572694.1
CDS CCA 90 bp GGTGGGGAGAGCTGCACCGTGCCAGGGAGAAGCAAGGGCACAGCGTaGGAAAGGCAGACGTTCTGGAGCAGGAGTGCAGCGGCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: GGESCTVPGRSKGTA*ERQTFWSRSAAAQK
Trigger: CTTCTGAGCCGCTGCACTCCTGCTCCAGAACGTCTGCCTTTCCCACGCTGTGCCCTTGCTTCTCCCTGGCACGGTGCAGCTCTCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570773.5
CDS CCA 90 bp CCGGCAAAGAGCGGGTTGTCTTCGGAGCACTTCAGGAAGTTCCTCTaGGGGCACCGTGGCAGGTCAGAGAGAGCGGCAGGTCAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: PAKSGLSSEHFRKFL*GHRGRSERAAGQAR
Trigger: CCTCGCCTGACCTGCCGCTCTCTCTGACCTGCCACGGTGCCCCCAGAGGAACTTCCTGAAGTGCTCCGAAGACAACCCGCTCTTTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570773.5
CDS CCA 90 bp CCAGTGAGCCCAGGTCCCCTGCAGTGCAAGACCCTGCGGACACCTTaGGACCCAGCCACCAGAGCCCCTTCACACCCTCCACTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: PVSPGPLQCKTLRTP*DPATRAPSHPPLGD
Trigger: ATCACCAAGTGGAGGGTGTGAAGGGGCTCTGGTGGCTGGGTCCCAAGGTGTCCGCAGGGTCTTGCACTGCAGGGGACCTGGGCTCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS CCA 90 bp CAGCGGCTGCCTACTCCAGGCCTGCGAGACTGTCCTGAGAAGGCCTaGATAAAGACAGGCTGGGTGCAGAGGGGTCAGAGGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: QRLPTPGLRDCPEKA*IKTGWVQRGQRLRP
Trigger: GGGCCTCAGCCTCTGACCCCTCTGCACCCAGCCTGTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCAGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS-3UTR CAA 90 bp AGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGATGGCACTCTCGGCGTaGCGTTCCTGCCACACGCCC +
Preference number: 5 (lower is better)
Translates to: SWTSAWQTGRQCDSEHLPMALSA*RSCHTP
Trigger: GGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCAT...CGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CCTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGCGCAGCGTGGTGGACTaGATCTCGATGAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: PPPLRFSHWPPRTCEREERSVVD*ISMRRR
Trigger: CCTCCGCCTCATCGAGATCAAGTCCACCACGCTGCG...CTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACATCTGGCTCCGGATCTaGCCCAGCTCCGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VVSGTRDAGGKLDLCVADIWLRI*PSSVCR
Trigger: CCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGAT...GTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGATCTGGCTCCGGATCTaGCCCAGCTCCGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LSFIRRDPVGKWASVVARIWLRI*PSSVCR
Trigger: CCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGAT...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGATCTGGCTCCGGATCTaGCCCAGCTCCGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGIWLRI*PSSVCR
Trigger: CCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGAT...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCGAAGTGGCCGATGTaGATGACCCACACGGCCACG +
Preference number: 5 (lower is better)
Translates to: LSFIRRDPVGKWASVVARAKWPM*MTHTAT
Trigger: CGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTCCCCCACTGCGTTTCTCTCACTGGCCGCCCAGAACCTGTGAGAGGGAGGAGGGCGAAGTGGCCGATGTaGATGACCCACACGGCCACG +
Preference number: 5 (lower is better)
Translates to: LPHCVSLTGRPEPVRGRRAKWPM*MTHTAT
Trigger: CGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGC...CCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCAGTGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGTCCAGAGCCGAGTCGTaGCACAGGGCGCAGATGGTC +
Preference number: 5 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKSRAES*HRAQMV
Trigger: GACCATCTGCGCCCTGTGCAACGACTCGGCTCTGGA...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAACCATGTCCTCCTTCCTaGGGGGCGCGTCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: AHWSARQAEGLWMWGTRKPCPPS*GARPGW
Trigger: CCACCCGGGACGCGCCCCCAAGGAAGGAGGACATGG...TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCCATGTCCTCCTTCCTaGGGGGCGCGTCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAPCPPS*GARPGW
Trigger: CCACCCGGGACGCGCCCCCAAGGAAGGAGGACATGG...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp TACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGCCACGGCAGTGCCTTaGTTATCCCCCGTGATCATG +
Preference number: 5 (lower is better)
Translates to: YQGRGWQVGPLRGRPGGSATAVP*LSPVIM
Trigger: CATGATCACGGGGGATAACAAAGGCACTGCCGTGGC...ACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGGAGTCCACGATGCGGGACTaGTGTGCGGGCTCCACGCGG +
Preference number: 5 (lower is better)
Translates to: EAASSSREPTLWKQSGVESTMRD*CAGSTR
Trigger: CCGCGTGGAGCCCGCACACAAGTCCCGCATCGTGGA...CTCCACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGCCGGCAAAGAGCGGGTaGTCTTCGGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWPAKSG*SSEHFR
Trigger: CCTGAAGTGCTCCGAAGACAACCCGCTCTTTGCCGG...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp AGGGGGCTGCCCACCCTCGCTGTACACAGCTGGGCCCAGATGGCCCCTTCTGATCCGGCAAAGAGCGGGTaGTCTTCGGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: RGLPTLAVHSWAQMAPSDPAKSG*SSEHFR
Trigger: CCTGAAGTGCTCCGAAGACAACCCGCTCTTTGCCGG...ATCAGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAGGGTGGGCAGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS TCA 90 bp GGGCAGGCCCAGAATTGCCGTGAGGAAGATGCTGGAACAGAGTCATaGGCTCTAGCCCCGGTAGGCCTAGCCCCCGGCAGATGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GQAQNCREEDAGTES*ALAPVGLAPGRCRL
Trigger: GAGCCTGCATCTGCCGGGGGCTAGGCCTACCGGGGCTAGAGCTCATGACTCTGTTCCAGCATCTTCCTCACGGCAATTCTGGGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS TCA 90 bp ACCTTGGGACCCAGCCACCAGAGCCCCTTCACACCCTCCACTTGGTaGTCCGAGAACGCCTCCCCGATGTGCAGACAGAGAGGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: TLGPSHQSPFTPSTW*SENASPMCRQRGSA
Trigger: CGCAGAGCCTCTCTGTCTGCACATCGGGGAGGCGTTCTCGGATCACCAAGTGGAGGGTGTGAAGGGGCTCTGGTGGCTGGGTCCCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS CCA 90 bp CCGATGTTGATGACCCACACGGCCACGCAGATCACAGAGATGGCGTaGGACAGCTGCCGTCCAAACTCGTCCAGCTTGCGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: PMLMTHTATQITEMA*DSCRPNSSSLRCSG
Trigger: GCCGCTGCAGCGCAAGCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGATCTGCGTGGCCGTGTGGGTCATCAACATCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CCA 90 bp AGGCAGAGATATCTGGAGCACCACCACCCACTGGCGCCCGCTCAGTaGGGTCACCTGGAAAATGAGAGGCAGGGGCGGCACGAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: RQRYLEHHHPLAPAQ*GHLENERQGRHEQD
Trigger: ATCCTGCTCGTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000570773.5
ENST00000570845.5
ENST00000571245.5
ENST00000572116.1
CDS CCA 90 bp CCCTTGACCCACCCACAAGGTGATACCAAAGAGGCCAACCCGGTGTaGTCTGGGGTCCAAGAGGTGGTCAGCGGCTGCCTACTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: PLTHPQGDTKEANPV*SGVQEVVSGCLLQA
Trigger: GGCCTGGAGTAGGCAGCCGCTGACCACCTCTTGGACCCCAGACCACACCGGGTTGGCCTCTTTGGTATCACCTTGTGGGTGGGTCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571245.5
CDS-3UTR CAA 90 bp TCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGACGCCCACAATGGCGTaGGCCACGAGGATCAGCATG +
Preference number: 5 (lower is better)
Translates to: SFIRRDPVGKWASVVARVTPTMA*ATRISM
Trigger: CATGCTGATCCTCGTGGCCAACGCCATTGTGGGCGT...CACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACACGCCCACAATGGCGTaGGCCACGAGGATCAGCATG +
Preference number: 5 (lower is better)
Translates to: VVSGTRDAGGKLDLCVADTPTMA*ATRISM
Trigger: CATGCTGATCCTCGTGGCCAACGCCATTGTGGGCGT...GTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGTCCGAGCGGATCACCTaGCCCATCTCAGGCTCATAC +
Preference number: 5 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGSERIT*PISGSY
Trigger: GTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGGA...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGCAGCGTGGTGGACTaGATCTCGATGAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: SAWQTGRQCDSEHLPSSGRSVVD*ISMRRR
Trigger: CCTCCGCCTCATCGAGATCAAGTCCACCACGCTGCG...TCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp ATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGCCACACCCACCGCTTaGCCCGATGTGATATTGGTG +
Preference number: 5 (lower is better)
Translates to: IYPAGPGGQVGECGGKGGATPTA*PDVILV
Trigger: CACCAATATCACATCGGGCAAAGCGGTGGGTGTGGC...CCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCCCAAACTCGTCCAGCTaGCGCTGCAGCGGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: GGEHMGTISLRYTPETPLPNSSS*RCSGVR
Trigger: GCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGG...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGCCCTTCACAAACATCTaGCTGCCCTGGCCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWPFTNI*LPWPVG
Trigger: CCCTACTGGCCAGGGCAGCAAGATGTTTGTGAAGGG...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCCCAATCCCGGATCTTaGCCAGGATCTGCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGPNPGS*PGSAPW
Trigger: CCAGGGAGCAGATCCTGGCAAAGATCCGGGATTGGG...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCGTGGCAGACCCCAATCCCGGATCTTaGCCAGGATCTGCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: VVSGTRDAGGKLDLCVADPNPGS*PGSAPW
Trigger: CCAGGGAGCAGATCCTGGCAAAGATCCGGGATTGGG...GTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGGGTCGTACTGCACAAACTaGCTGCAGTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FIRRDPVGKWASVVARVGSYCTN*LQSSSS
Trigger: GGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACGA...CCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGTCCACGATGCGGGACTaGTGTGCGGGCTCCACGCGG +
Preference number: 5 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPASTMRD*CAGSTR
Trigger: CCGCGTGGAGCCCGCACACAAGTCCCGCATCGTGGA...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGATCTCTGCCGCCGACTaGGCCACGGCCGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAISAAD*ATAVPE
Trigger: CTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGAT...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LSFIRRDPVGKWASVVARFRDRY*RASSSR
Trigger: CCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAA...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CAA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGFRDRY*RASSSR
Trigger: CCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAA...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CAA 90 bp CATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTGGCCAGGCTTTCCCGACTaGTCTCCCGGGAAAGGACAT +
Preference number: 5 (lower is better)
Translates to: HLSGGTRWASGRVWWQGWPGFPD*SPGKGH
Trigger: ATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGG...CCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS CCA 90 bp AGGTACTTGAGGGCCTCATCCAGCAGGATGACAGGCAGAGATATCTaGAGCACCACCACCCACTGGCGCCCGCTCAGTGGGGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: RYLRASSSRMTGRDI*STTTHWRPLSGVTW
Trigger: CCAGGTGACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000570773.5
ENST00000570845.5
ENST00000571245.5
ENST00000572116.1
CDS-3UTR CAA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGATCCTCTGCACGCCCTaGCGGTCCGAGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAILCTP*RSERIT
Trigger: GGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGAT...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCCACACCCACCGCTTaGCCCGATGTGATATTGGTG +
Preference number: 5 (lower is better)
Translates to: LSFIRRDPVGKWASVVARATPTA*PDVILV
Trigger: CACCAATATCACATCGGGCAAAGCGGTGGGTGTGGC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTAAGACCAAACTCGTCCAGCTaGCGCTGCAGCGGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: FSTKQQVSRWVQGPLLLRPNSSS*RCSGVR
Trigger: GCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGG...TCTTAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGGGCGAAGTGGCCGATGTaGATGACCCACACGGCCACG +
Preference number: 5 (lower is better)
Translates to: QKQPRALGSRLCGSRVEWAKWPM*MTHTAT
Trigger: CGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGC...CCACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGCGCACGATGGCGTTCTaGCGTGCCATGCGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLRTMAF*RAMRRV
Trigger: CACGCGGCGCATGGCACGCAAGAACGCCATCGTGCG...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTTCCAGAGCCGAGTCGTaGCACAGGGCGCAGATGGTC +
Preference number: 5 (lower is better)
Translates to: HGAHWSARQAEGLWMWGTSRAES*HRAQMV
Trigger: GACCATCTGCGCCCTGTGCAACGACTCGGCTCTGGA...AGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTTGTGTCCGTCTCTCTGACCCTTCACCCGCCCGGGCCCGGAGACTCCACTCTGTTCCGCATCAGCTGCTaGATGACCGTGTTACAGGCG +
Preference number: 5 (lower is better)
Translates to: LVSVSLTLHPPGPGDSTLFRISC*MTVLQA
Trigger: CGCCTGTAACACGGTCATCAAGCAGCTGATGCGGAA...CAGAGTGGAGTCTCCGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS-3UTR CAA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTCCCTTCACAAACATCTaGCTGCCCTGGCCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGPFTNI*LPWPVG
Trigger: CCCTACTGGCCAGGGCAGCAAGATGTTTGTGAAGGG...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGCCCTTCACAAACATCTaGCTGCCCTGGCCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKPFTNI*LPWPVG
Trigger: CCCTACTGGCCAGGGCAGCAAGATGTTTGTGAAGGG...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCTCTGCCCAATCCCGGATCTTaGCCAGGATCTGCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: EDVGGLRYQGRGWQVGPLPNPGS*PGSAPW
Trigger: CCAGGGAGCAGATCCTGGCAAAGATCCGGGATTGGG...CAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp AGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGCCCAATCCCGGATCTTaGCCAGGATCTGCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SWTSAWQTGRQCDSEHLPPNPGS*PGSAPW
Trigger: CCAGGGAGCAGATCCTGGCAAAGATCCGGGATTGGG...CGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGCCACGGCAGTGCCTTaGTTATCCCCCGTGATCATG +
Preference number: 5 (lower is better)
Translates to: LSFIRRDPVGKWASVVARATAVP*LSPVIM
Trigger: CATGATCACGGGGGATAACAAAGGCACTGCCGTGGC...CCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGTCCACGATGCGGGACTaGTGTGCGGGCTCCACGCGG +
Preference number: 5 (lower is better)
Translates to: HMGTISLRYTPETPLCSQSTMRD*CAGSTR
Trigger: CCGCGTGGAGCCCGCACACAAGTCCCGCATCGTGGA...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp AATCAGCCATCCTTAGTGACATCCTTTCGGCTCATGGGTGTCGTGGGGAGGGGGATCTCTGCCGCCGACTaGGCCACGGCCGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: NQPSLVTSFRLMGVVGRGISAAD*ATAVPE
Trigger: CTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGAT...CCCCCTCCCCACGACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGATCTCTGCCGCCGACTaGGCCACGGCCGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: HMGTISLRYTPETPLCSQISAAD*ATAVPE
Trigger: CTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGAT...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp TCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACCGGCAAAGAGCGGGTaGTCTTCGGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: SAWQTGRQCDSEHLPSSGPAKSG*SSEHFR
Trigger: CCTGAAGTGCTCCGAAGACAACCCGCTCTTTGCCGG...TCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAATCTCGGGAGCCGACTTaGTGGAAGCAGAGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: GRPGGSVTLNISRAQDGESREPT*WKQSGV
Trigger: CACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGA...TTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS TCA 90 bp TCAGGAGCCCCCTTCACAAACATCTTGCTGCCCTGGCCAGTAGGGTaGGGGCGGGTGGGCGTGCAGTACACGGACATGGATTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: SGAPFTNILLPWPVG*GRVGVQYTDMDFRS
Trigger: AGACCGGAAATCCATGTCCGTGTACTGCACGCCCACCCGCCCTCACCCTACTGGCCAGGGCAGCAAGATGTTTGTGAAGGGGGCTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000572694.1
CDS TCA 90 bp AAGAGGTGGTCAGCGGCTGCCTACTCCAGGCCTGCGAGACTGTCCTaGGAAGGCCTGGATAAAGACAGGCTGGGTGCAGAGGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: KRWSAAAYSRPARLS*EGLDKDRLGAEGSE
Trigger: CTCTGACCCCTCTGCACCCAGCCTGTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS GCA 90 bp ACTTCGCCCTCGGGGGTATACGTGGTACCCGAGATGGTGAACTCGTaGAAAAGGCAGGAGCCCGCATCGGCCTCGGCTACCACGAACATC +
Preference number: 5 (lower is better)
Translates to: TSPSGVYVVPEMVNS*KRQEPASASATTNI
Trigger: GATGTTCGTGGTAGCCGAGGCCGATGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCACGTATACCCCCGAGGGCGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000572694.1
CDS GCA 90 bp AGGAGGGAAATAGAACGCAGGGTCCAGGCTGAGGCAGGGACCGTCTaGTCTGCCAGATGTGTCCGGCTCCGGTTTGTCCCAATGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RREIERRVQAEAGTV*SARCVRLRFVPMSW
Trigger: CCAGGACATTGGGACAAACCGGAGCCGGACACATCTGGCAGAGCAGACGGTCCCTGCCTCAGCCTGGACCCTGCGTTCTATTTCCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572694.1
CDS-3UTR CAA 90 bp CAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAAGGGATGTGAGTCTATGGCACTCTCGGCGTaGCGTTCCTGCCACACGCCC +
Preference number: 5 (lower is better)
Translates to: QGRLRGFGCGGLGKGCESMALSA*RSCHTP
Trigger: GGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCAT...AGACTCACATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTCCGAGCGGATCACCTaGCCCATCTCAGGCTCATAC +
Preference number: 5 (lower is better)
Translates to: VRNLRMSVVSGTRDAGGKSERIT*PISGSY
Trigger: GTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGGA...CTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGATCCTCTGCACGCCCTaGCGGTCCGAGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLILCTP*RSERIT
Trigger: GGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGAT...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GCTTCCGAACAAGGGGGAGCAAGCTCCAGCTGCACTCGTGATTTGGGGGTGGGGGCCACACCCACCGCTTaGCCCGATGTGATATTGGTG +
Preference number: 5 (lower is better)
Translates to: ASEQGGASSSCTRDLGVGATPTA*PDVILV
Trigger: CACCAATATCACATCGGGCAAAGCGGTGGGTGTGGC...CCCCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp GGGGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTGCCACACCCACCGCTTaGCCCGATGTGATATTGGTG +
Preference number: 5 (lower is better)
Translates to: GGGGEHMGTISLRYTPETATPTA*PDVILV
Trigger: CACCAATATCACATCGGGCAAAGCGGTGGGTGTGGC...AGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCATCTGGCTCCGGATCTaGCCCAGCTCCGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: MGTISLRYTPETPLCSQRIWLRI*PSSVCR
Trigger: CCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGAT...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCGCACGATGGCGTTCTaGCGTGCCATGCGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: EHMGTISLRYTPETPLCSRTMAF*RAMRRV
Trigger: CACGCGGCGCATGGCACGCAAGAACGCCATCGTGCG...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGTTCCGCATCAGCTGCTaGATGACCGTGTTACAGGCG +
Preference number: 5 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKFRISC*MTVLQA
Trigger: CGCCTGTAACACGGTCATCAAGCAGCTGATGCGGAA...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTTCCGCATCAGCTGCTaGATGACCGTGTTACAGGCG +
Preference number: 5 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGFRISC*MTVLQA
Trigger: CGCCTGTAACACGGTCATCAAGCAGCTGATGCGGAA...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACTCGTACTGCACAAACTaGCTGCAGTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LRGRPGGSVTLNISRAQDSYCTN*LQSSSS
Trigger: GGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACGA...GTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCATTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GGGEHMGTISLRYTPETPFRDRY*RASSSR
Trigger: CCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAA...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CAA 90 bp CGGCAGTGTGACTCTGAACATCTCCCGAGCTCAGGACGGGGAACCCTGAGTCCAGGAGAGCGGGTGCCCTaGGGGAATCAGCCATCCTTA +
Preference number: 5 (lower is better)
Translates to: RQCDSEHLPSSGRGTLSPGERVP*GNQPSL
Trigger: TAAGGATGGCTGATTCCCCAAGGGCACCCGCTCTCC...TGGACTCAGGGTTCCCCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS TCA 90 bp AAGAGGTGGTCAGCGGCTGCCTACTCCAGGCCTGCGAGACTGTCCTaGGAAGGCCTGGATAAAGACAGGCGTGCATGTGGTTCCGGGACA +
Preference number: 5 (lower is better)
Translates to: KRWSAAAYSRPARLS*EGLDKDRRACGSGT
Trigger: TGTCCCGGAACCACATGCACGCCTGTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000570845.5
CDS CCA 90 bp CTCACTTCTGGCTCATTTCTTCAAAGAGGCCAACCCGGTGTGGTCTaGGGTCCAAGAGGTGGTCAGCGGCTGCCTACTCCAGGCCTGCGA +
Preference number: 5 (lower is better)
Translates to: LTSGSFLQRGQPGVV*GPRGGQRLPTPGLR
Trigger: TCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTCTTGGACCCCAGACCACACCGGGTTGGCCTCTTTGAAGAAATGAGCCAGAAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397035.7
CDS-3UTR CAA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCACGCCCACAATGGCGTaGGCCACGAGGATCAGCATG +
Preference number: 5 (lower is better)
Translates to: GGEHMGTISLRYTPETPLTPTMA*ATRISM
Trigger: CATGCTGATCCTCGTGGCCAACGCCATTGTGGGCGT...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCACGCCCACAATGGCGTaGGCCACGAGGATCAGCATG +
Preference number: 5 (lower is better)
Translates to: MGTISLRYTPETPLCSQRTPTMA*ATRISM
Trigger: CATGCTGATCCTCGTGGCCAACGCCATTGTGGGCGT...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCATGGCACTCTCGGCGTaGCGTTCCTGCCACACGCCC +
Preference number: 5 (lower is better)
Translates to: EHMGTISLRYTPETPLCSMALSA*RSCHTP
Trigger: GGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCAT...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCATCCGAGCGGATCACCTaGCCCATCTCAGGCTCATAC +
Preference number: 5 (lower is better)
Translates to: GGGEHMGTISLRYTPETPSERIT*PISGSY
Trigger: GTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGGA...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GCCAGAGCTGCAGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACCGCAGCGTGGTGGACTaGATCTCGATGAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: ARAAEQGTSQESPGDRNYRSVVD*ISMRRR
Trigger: CCTCCGCCTCATCGAGATCAAGTCCACCACGCTGCG...GTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCTGCAGCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp AGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGCGCAGCGTGGTGGACTaGATCTCGATGAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: RRTHGHHQSEVHTGDSTLRSVVD*ISMRRR
Trigger: CCTCCGCCTCATCGAGATCAAGTCCACCACGCTGCG...CAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp TGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGATGGCCTCTGTGTGCTaGGTCACGGACACAGATTCA +
Preference number: 5 (lower is better)
Translates to: CHLSGGTRWASGRVWWQGMASVC*VTDTDS
Trigger: TGAATCTGTGTCCGTGACCAAGCACACAGAGGCCAT...CCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp AGGCTTTCCCGACTTGTCTCCCGGGAAAGGACATCCTCGCTCCGCCCTCCTGCCATGGCCTCTGTGTGCTaGGTCACGGACACAGATTCA +
Preference number: 5 (lower is better)
Translates to: RLSRLVSRERTSSLRPPAMASVC*VTDTDS
Trigger: TGAATCTGTGTCCGTGACCAAGCACACAGAGGCCAT...GGCAGGAGGGCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp AGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGCCAGTCCAGAGCCGAGTCGTaGCACAGGGCGCAGATGGTC +
Preference number: 5 (lower is better)
Translates to: RELPRRVQETGITDLPGQSRAES*HRAQMV
Trigger: GACCATCTGCGCCCTGTGCAACGACTCGGCTCTGGA...CTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCTCGTACTGCACAAACTaGCTGCAGTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSSYCTN*LQSSSS
Trigger: GGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACGA...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CAAGTTGGACCTCTGCGTGGCAGACCGGGCGGCAGTGTGACTCTGAACATCTCCGCCACGGCAGTGCCTTaGTTATCCCCCGTGATCATG +
Preference number: 5 (lower is better)
Translates to: QVGPLRGRPGGSVTLNISATAVP*LSPVIM
Trigger: CATGATCACGGGGGATAACAAAGGCACTGCCGTGGC...GGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp AACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCTCCACGATGCGGGACTaGTGTGCGGGCTCCACGCGG +
Preference number: 5 (lower is better)
Translates to: NLYFSTKQQVSRWVQGPLSTMRD*CAGSTR
Trigger: CCGCGTGGAGCCCGCACACAAGTCCCGCATCGTGGA...GAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGCGCCACGGTCAGGAACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGACGCTGTTGAGGGCATaGCACATTTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: GATVRNLRMSVVSGTRDATLLRA*HISMVT
Trigger: CGTGACCATTGAAATGTGCAATGCCCTCAACAGCGT...CGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp AGGGGGCTGCCCACCCTCGCTGTACACAGCTGGGCCCAGATGGCCCCTTCTGATTTCTCCGAGACGCTGTaGAGGGCATTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: RGLPTLAVHSWAQMAPSDFSETL*RALHIS
Trigger: TGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGAA...ATCAGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAGGGTGGGCAGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GGEHMGTISLRYTPETPLFRDRY*RASSSR
Trigger: CCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAA...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CAA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MGTISLRYTPETPLCSQRFRDRY*RASSSR
Trigger: CCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAA...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CAA 90 bp AACCTGAGGATGTCGGTGGTCTCAGGTACCAGGGACGCGGGTGGCAAGTTGGACCCAGGCTTTCCCGACTaGTCTCCCGGGAAAGGACAT +
Preference number: 5 (lower is better)
Translates to: NLRMSVVSGTRDAGGKLDPGFPD*SPGKGH
Trigger: ATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGG...GTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGACATCCTCAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCTCCGAGCGGATCACCTaGCCCATCTCAGGCTCATAC +
Preference number: 5 (lower is better)
Translates to: MGTISLRYTPETPLCSQRSERIT*PISGSY
Trigger: GTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGGA...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGAAGTGGCCGATGTaGATGACCCACACGGCCACG +
Preference number: 5 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPAKWPM*MTHTAT
Trigger: CGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGC...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GAGCTGCAGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACTCCAGAGCCGAGTCGTaGCACAGGGCGCAGATGGTC +
Preference number: 5 (lower is better)
Translates to: ELQSRELPRRVQETGITDSRAES*HRAQMV
Trigger: GACCATCTGCGCCCTGTGCAACGACTCGGCTCTGGA...GTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCTGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCATCCAGAGCCGAGTCGTaGCACAGGGCGCAGATGGTC +
Preference number: 5 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPSRAES*HRAQMV
Trigger: GACCATCTGCGCCCTGTGCAACGACTCGGCTCTGGA...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CTGACCCTTCACCCGCCCGGGCCCTGCACATATAAACAGAAGCAGCCTCGAGCTTTCCGCATCAGCTGCTaGATGACCGTGTTACAGGCG +
Preference number: 5 (lower is better)
Translates to: LTLHPPGPCTYKQKQPRAFRISC*MTVLQA
Trigger: CGCCTGTAACACGGTCATCAAGCAGCTGATGCGGAA...AGCTCGAGGCTGCTTCTGTTTATATGTGCAGGGCCCGGGCGGGTGAAGGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp CATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTTCGTACTGCACAAACTaGCTGCAGTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HGAHWSARQAEGLWMWGTSYCTN*LQSSSS
Trigger: GGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACGA...AGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCGCCACGGCAGTGCCTTaGTTATCCCCCGTGATCATG +
Preference number: 5 (lower is better)
Translates to: GGEHMGTISLRYTPETPLATAVP*LSPVIM
Trigger: CATGATCACGGGGGATAACAAAGGCACTGCCGTGGC...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAACGCTGTTGAGGGCATaGCACATTTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQTLLRA*HISMVT
Trigger: CGTGACCATTGAAATGTGCAATGCCCTCAACAGCGT...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CAA 90 bp GTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGGGTTTCTCCGAGACGCTGTaGAGGGCATTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: VIYPAGPGGQVGECGGKGFSETL*RALHIS
Trigger: TGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGAA...ACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CAA 90 bp GCCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAATTCTCCGAGACGCTGTaGAGGGCATTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: ACHLSGGTRWASGRVWWQFSETL*RALHIS
Trigger: TGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGAA...TTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
ENST00000570845.5
CDS-3UTR CAA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HMGTISLRYTPETPLCSQFRDRY*RASSSR
Trigger: CCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAA...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CAA 90 bp GCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTGGGGGACTAGGAAATCTCGGGAGCCGACTTaGTGGAAGCAGAGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: AHWSARQAEGLWMWGTRKSREPT*WKQSGV
Trigger: CACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGA...TTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS TCA 90 bp AGCTGTGAGCTCAGAAACAACCCTCCCCTTGACCCACCCACAAGGTaGTACCAAAGAGGCCAACCCGGTGTGGTCTGGGGTCCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: SCELRNNPPLDPPTR*YQRGQPGVVWGPRG
Trigger: ACCTCTTGGACCCCAGACCACACCGGGTTGGCCTCTTTGGTATCACCTTGTGGGTGGGTCAAGGGGAGGGTTGTTTCTGAGCTCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571245.5
CDS GCA 90 bp TCGTTCACTCCATCGCCAGTCATAGCAGTGATCTCGTTAAAGGACTaGAGGTTCTCCACGATGCGGGACTTGTGTGCGGGCTCCACGCGG +
Preference number: 5 (lower is better)
Translates to: SFTPSPVIAVISLKD*RFSTMRDLCAGSTR
Trigger: CCGCGTGGAGCCCGCACACAAGTCCCGCATCGTGGAGAACCTGCAGTCCTTTAACGAGATCACTGCTATGACTGGCGATGGAGTGAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCACGCCCACAATGGCGTaGGCCACGAGGATCAGCATG +
Preference number: 5 (lower is better)
Translates to: EHMGTISLRYTPETPLCSTPTMA*ATRISM
Trigger: CATGCTGATCCTCGTGGCCAACGCCATTGTGGGCGT...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CCTGTCATTTATCCGGCGGGACCCGGTGGGCAAGTGGGCGAGTGTGGTGGCAAGTTGCCCGATGTGATATaGGTGCCAGAAAACAGCATG +
Preference number: 5 (lower is better)
Translates to: PVIYPAGPGGQVGECGGKLPDVI*VPENSM
Trigger: CATGCTGTTTTCTGGCACCAATATCACATCGGGCAA...CTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397041.8
CDS-3UTR CAA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTCGCACGATGGCGTTCTaGCGTGCCATGCGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSRTMAF*RAMRRV
Trigger: CACGCGGCGCATGGCACGCAAGAACGCCATCGTGCG...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGTTCCGCATCAGCTGCTaGATGACCGTGTTACAGGCG +
Preference number: 5 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPAFRISC*MTVLQA
Trigger: CGCCTGTAACACGGTCATCAAGCAGCTGATGCGGAA...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCCCTTCACAAACATCTaGCTGCCCTGGCCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: HMGTISLRYTPETPLCSQPFTNI*LPWPVG
Trigger: CCCTACTGGCCAGGGCAGCAAGATGTTTGTGAAGGG...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCCAATCCCGGATCTTaGCCAGGATCTGCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFPNPGS*PGSAPW
Trigger: CCAGGGAGCAGATCCTGGCAAAGATCCGGGATTGGG...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGTCGTACTGCACAAACTaGCTGCAGTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HGHHQSEVHTGDSTLFPASYCTN*LQSSSS
Trigger: GGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACGA...CGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCGGCAAAGAGCGGGTaGTCTTCGGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFPAKSG*SSEHFR
Trigger: CCTGAAGTGCTCCGAAGACAACCCGCTCTTTGCCGG...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GGGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACGCTGTTGAGGGCATaGCACATTTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: GRRRTHGHHQSEVHTGDSTLLRA*HISMVT
Trigger: CGTGACCATTGAAATGTGCAATGCCCTCAACAGCGT...GGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CAA 90 bp AGAGCAGGGAACTTCCCAGGAGAGTCCAGGAGACAGGAATTACAGACCTCCCAGGGAGAGCGGGTGCCCTaGGGGAATCAGCCATCCTTA +
Preference number: 5 (lower is better)
Translates to: RAGNFPGESRRQELQTSQGERVP*GNQPSL
Trigger: TAAGGATGGCTGATTCCCCAAGGGCACCCGCTCTCC...CTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGGGAAGTTCCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp TATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCCTGCTATCCGAGCGGATCACCTaGCCCATCTCAGGCTCATAC +
Preference number: 5 (lower is better)
Translates to: YFSTKQQVSRWVQGPLLLSERIT*PISGSY
Trigger: GTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGGA...TAGCAGGAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp ACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAATCTGGCTCCGGATCTaGCCCAGCTCCGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: TYKQKQPRALGSRLCGSRIWLRI*PSSVCR
Trigger: CCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGAT...TCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCGCCACGGCAGTGCCTTaGTTATCCCCCGTGATCATG +
Preference number: 5 (lower is better)
Translates to: EHMGTISLRYTPETPLCSATAVP*LSPVIM
Trigger: CATGATCACGGGGGATAACAAAGGCACTGCCGTGGC...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCCACGGCAGTGCCTTaGTTATCCCCCGTGATCATG +
Preference number: 5 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPATAVP*LSPVIM
Trigger: CATGATCACGGGGGATAACAAAGGCACTGCCGTGGC...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCAACGCTGTTGAGGGCATaGCACATTTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: GGGEHMGTISLRYTPETPTLLRA*HISMVT
Trigger: CGTGACCATTGAAATGTGCAATGCCCTCAACAGCGT...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CAA 90 bp GGCGGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCATTCTCCGAGACGCTGTaGAGGGCATTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: GGGEHMGTISLRYTPETPFSETL*RALHIS
Trigger: TGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGAA...TGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CAA 90 bp AACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: NLYFSTKQQVSRWVQGPLFRDRY*RASSSR
Trigger: CCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAA...GAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGATGGCCTCTGTGTGCTaGGTCACGGACACAGATTCA +
Preference number: 5 (lower is better)
Translates to: HMGTISLRYTPETPLCSQMASVC*VTDTDS
Trigger: TGAATCTGTGTCCGTGACCAAGCACACAGAGGCCAT...CTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp AACCTTTATTTCTCTACCAAACAGCAGGTCAGCAGGTGGGTACAGGGCCCGCTCGCCACACCCACCGCTTaGCCCGATGTGATATTGGTG +
Preference number: 5 (lower is better)
Translates to: NLYFSTKQQVSRWVQGPLATPTA*PDVILV
Trigger: CACCAATATCACATCGGGCAAAGCGGTGGGTGTGGC...GAGCGGGCCCTGTACCCACCTGCTGACCTGCTGTTTGGTAGAGAAATAAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAATCTGGCTCCGGATCTaGCCCAGCTCCGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GTILGAGFCYPSLVFAKVIWLRI*PSSVCR
Trigger: CCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGAT...TACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTACAGAACATGGAGCCCATTGGTCTGCAAGGCAGGCTGAGGGGCTTTGGATGTTTCCGCATCAGCTGCTaGATGACCGTGTTACAGGCG +
Preference number: 5 (lower is better)
Translates to: LQNMEPIGLQGRLRGFGCFRISC*MTVLQA
Trigger: CGCCTGTAACACGGTCATCAAGCAGCTGATGCGGAA...ACATCCAAAGCCCCTCAGCCTGCCTTGCAGACCAATGGGCTCCATGTTCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GCACATATAAACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCACCCTTCACAAACATCTaGCTGCCCTGGCCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: AHINRSSLELSGADFVEAPFTNI*LPWPVG
Trigger: CCCTACTGGCCAGGGCAGCAAGATGTTTGTGAAGGG...TGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp CATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCTCACTTCTTCGTACTGCACAAACTaGCTGCAGTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HQSEVHTGDSTLFPALTSSYCTN*LQSSSS
Trigger: GGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACGA...AGAAGTGAGCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309890.11
CDS-3UTR CAA 90 bp ACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGACGCTGTTGAGGGCATaGCACATTTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: TEAASSSREPTLWKQSGVTLLRA*HISMVT
Trigger: CGTGACCATTGAAATGTGCAATGCCCTCAACAGCGT...CACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp ATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAGCGCTTCTCCGAGACGCTGTaGAGGGCATTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: MGTISLRYTPETPLCSQRFSETL*RALHIS
Trigger: TGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGAA...GCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS GCA 90 bp GCTCACCATTCCCCACAGGCATCCTCACATGTGAATACGAGTGTGTaGACAGTCACACGCCGGCACAAATCCTTCTGCTTGTACTCACGC +
Preference number: 5 (lower is better)
Translates to: AHHSPQASSHVNTSV*TVTRRHKSFCLYSR
Trigger: GCGTGAGTACAAGCAGAAGGATTTGTGCCGGCGTGTGACTGTGCACACACTCGTATTCACATGTGAGGATGCCTGTGGGGAATGGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS-3UTR CAA 90 bp CGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCATGGCCTCTGTGTGCTaGGTCACGGACACAGATTCA +
Preference number: 5 (lower is better)
Translates to: RTHGHHQSEVHTGDSTLFMASVC*VTDTDS
Trigger: TGAATCTGTGTCCGTGACCAAGCACACAGAGGCCAT...GAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp ACAGAAGCAGCCTCGAGCTCTCGGGAGCCGACTTTGTGGAAGCAGAGTGGAGTGTTGCCCGATGTGATATaGGTGCCAGAAAACAGCATG +
Preference number: 5 (lower is better)
Translates to: TEAASSSREPTLWKQSGVLPDVI*VPENSM
Trigger: CATGCTGTTTTCTGGCACCAATATCACATCGGGCAA...CACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCTCGAGGCTGCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309890.11
ENST00000397041.8
CDS-3UTR CAA 90 bp GGAGGCGAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTTGCCCGATGTGATATaGGTGCCAGAAAACAGCATG +
Preference number: 5 (lower is better)
Translates to: GGEHMGTISLRYTPETPLLPDVI*VPENSM
Trigger: CATGCTGTTTTCTGGCACCAATATCACATCGGGCAA...GAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTCGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS-3UTR CAA 90 bp CTTGATTTACATATAAAATCATCAGTCTGCACACGCTCTAGGAGTGGCCAAGACCCATGTCCTCCTTCCTaGGGGGCGCGTCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LDLHIKSSVCTRSRSGQDPCPPS*GARPGW
Trigger: CCACCCGGGACGCGCCCCCAAGGAAGGAGGACATGG...GTCTTGGCCACTCCTAGAGCGTGTGCAGACTGATGATTTTATATGTAAATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCCCGGCAAAGAGCGGGTaGTCTTCGGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSPAKSG*SSEHFR
Trigger: CCTGAAGTGCTCCGAAGACAACCCGCTCTTTGCCGG...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCAACGCTGTTGAGGGCATaGCACATTTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPTLLRA*HISMVT
Trigger: CGTGACCATTGAAATGTGCAATGCCCTCAACAGCGT...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CAA 90 bp GAACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCTTCTCCGAGACGCTGTaGAGGGCATTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: EHMGTISLRYTPETPLCSFSETL*RALHIS
Trigger: TGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGAA...GGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
ENST00000570845.5
CDS-3UTR CAA 90 bp AGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTCCAGGCTTTCCCGACTaGTCTCCCGGGAAAGGACAT +
Preference number: 5 (lower is better)
Translates to: RDNPWCRFLLPLASFCQSPGFPD*SPGKGH
Trigger: ATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGG...ACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp ACACATGGGCACCATCAGTCTGAGGTACACACCGGAGACTCCACTCTGTTCCCATTGCCCGATGTGATATaGGTGCCAGAAAACAGCATG +
Preference number: 5 (lower is better)
Translates to: THGHHQSEVHTGDSTLFPLPDVI*VPENSM
Trigger: CATGCTGTTTTCTGGCACCAATATCACATCGGGCAA...TGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 90 bp GCAAACACAAGCAAACACCTACATATCTGCCCTGAGGTGCAGAGATaGAGAATCCATCCATGTCCAGCAACACACACGCTCACCATTCCC +
Preference number: 5 (lower is better)
Translates to: ANTSKHLHICPEVQR*RIHPCPATHTLTIP
Trigger: GGGAATGGTGAGCGTGTGTGTTGCTGGACATGGATGGATTCTGCATCTCTGCACCTCAGGGCAGATATGTAGGTGTTTGCTTGTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS GCA 90 bp ACCATCCGGCAAACACAAGCAAACACCTACATATCTGCCCTGAGGTaGAGAGATGCAGAATCCATCCATGTCCAGCAACACACACGCTCA +
Preference number: 5 (lower is better)
Translates to: TIRQTQANTYISALR*RDAESIHVQQHTRS
Trigger: TGAGCGTGTGTGTTGCTGGACATGGATGGATTCTGCATCTCTGCACCTCAGGGCAGATATGTAGGTGTTTGCTTGTGTTTGCCGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS-3UTR CAA 90 bp GCAAAAGCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCAGCGAAGTGGCCGATGTaGATGACCCACACGGCCACG +
Preference number: 5 (lower is better)
Translates to: AKAELREKFCPSEAIFLSAKWPM*MTHTAT
Trigger: CGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGC...TGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGCTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp ACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCAATGGCCTCTGTGTGCTaGGTCACGGACACAGATTCA +
Preference number: 5 (lower is better)
Translates to: TILGAGFCYPSLVFAKVAMASVC*VTDTDS
Trigger: TGAATCTGTGTCCGTGACCAAGCACACAGAGGCCAT...TGCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp AGACATAGGGACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCTTCTCCGAGACGCTGTaGAGGGCATTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: RHRDNPWCRFLLPLASFCFSETL*RALHIS
Trigger: TGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGAA...GCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS GCA 90 bp GTGAATACGAGTGTGTGCACAGTCACACGCCGGCACAAATCCTTCTaGTTGTACTCACGCTCAAAATGCACCAGAGCACACATGCAAAAT +
Preference number: 5 (lower is better)
Translates to: VNTSVCTVTRRHKSF*LYSRSKCTRAHMQN
Trigger: ATTTTGCATGTGTGCTCTGGTGCATTTTGAGCGTGAGTACAAGCAGAAGGATTTGTGCCGGCGTGTGACTGTGCACACACTCGTATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS-3UTR CAA 90 bp GACAATCCTTGGTGCAGGTTTCTGCTACCCCTCGCTAGTTTTTGCCAAAGTAGCTTGCCCGATGTGATATaGGTGCCAGAAAACAGCATG +
Preference number: 5 (lower is better)
Translates to: DNPWCRFLLPLASFCQSSLPDVI*VPENSM
Trigger: CATGCTGTTTTCTGGCACCAATATCACATCGGGCAA...GCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATGCCACACCCACCGCTTaGCCCGATGTGATATTGGTG +
Preference number: 5 (lower is better)
Translates to: AELREKFCPSEAIFLSSDATPTA*PDVILV
Trigger: CACCAATATCACATCGGGCAAAGCGGTGGGTGTGGC...ATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp GCAAAAGCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCACCCTTCACAAACATCTaGCTGCCCTGGCCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: AKAELREKFCPSEAIFLSPFTNI*LPWPVG
Trigger: CCCTACTGGCCAGGGCAGCAAGATGTTTGTGAAGGG...TGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGCTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS-3UTR CAA 90 bp CTTGATTTACATATAAAATCATCAGTCTGCACACGCTCTAGGAGTGGCCAAGACATGGCCTCTGTGTGCTaGGTCACGGACACAGATTCA +
Preference number: 5 (lower is better)
Translates to: LDLHIKSSVCTRSRSGQDMASVC*VTDTDS
Trigger: TGAATCTGTGTCCGTGACCAAGCACACAGAGGCCAT...GTCTTGGCCACTCCTAGAGCGTGTGCAGACTGATGATTTTATATGTAAATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS GCA 90 bp TGTGAAAATCAACCAACAAAACCATGCGGGAGTGGAATTCACCTTTaGGGTATAGAAGATGAAGGCTACGCAGGCCCTGTTCACTGTTAT +
Preference number: 5 (lower is better)
Translates to: CENQPTKPCGSGIHL*GIEDEGYAGPVHCY
Trigger: ATAACAGTGAACAGGGCCTGCGTAGCCTTCATCTTCTATACCGCAAAGGTGAATTCCACTCCCGCATGGTTTTGTTGGTTGATTTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570773.5
CDS-3UTR CAA 90 bp GCTGAGTTAAGAGAAAAATTCTGTCCATCAGAGGCCATCTTCCTCTCATCTGATACGCTGTTGAGGGCATaGCACATTTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: AELREKFCPSEAIFLSSDTLLRA*HISMVT
Trigger: CGTGACCATTGAAATGTGCAATGCCCTCAACAGCGT...ATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTTAACTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309890.11
ENST00000397035.7
ENST00000397041.8
CDS GCA 72 bp GAGAAGTGGCGCAGCACGTCGGCGGCCGGGAGCAGATaGGCCGCCTCCATGCCGCCCGCCCGGCCGTCTGCG +
Preference number: 6 (lower is better)
Translates to: EKWRSTSAAGSR*AASMPPARPSA
Trigger: CGCAGACGGCCGGGCGGGCGGCATGGAGGCGGCGCATCTGCTCCCGGCCGCCGACGTGCTGCGCCACTTCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CCA 72 bp GCCGGGCTCAGGCCGCCCTCGGCTGTCACCGAGAAGTaGCGCAGCACGTCGGCGGCCGGGAGCAGATGCGCC +
Preference number: 6 (lower is better)
Translates to: AGLRPPSAVTEK*RSTSAAGSRCA
Trigger: GGCGCATCTGCTCCCGGCCGCCGACGTGCTGCGCCACTTCTCGGTGACAGCCGAGGGCGGCCTGAGCCCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CAA 72 bp CGCTCGGGCTCGACTGCCGCCATCTGGCTCCGGATCTaGCCCAGCTCCGTGTGCAGGCCGGTGGCCACGGCC +
Preference number: 6 (lower is better)
Translates to: RSGSTAAIWLRI*PSSVCRPVATA
Trigger: GGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CAA 90 bp AGCGGCGTCCGCTCGGGCTCGACTGCCGCCATCTGGCTCCGGATCTaGCCCAGCTCCGTGTGCAGGCCGGTGGCCACGGCCACACCCACC +
Preference number: 6 (lower is better)
Translates to: SGVRSGSTAAIWLRI*PSSVCRPVATATPT
Trigger: GGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGCGGACGCCGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 72 bp GCTCGGGCTCGACTGCCGCCATCTGGCTCCGGATCTTaGCCAGCTCCGTGTGCAGGCCGGTGGCCACGGCCA +
Preference number: 6 (lower is better)
Translates to: ARARLPPSGSGS*PAPCAGRWPRP
Trigger: TGGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAAGATCCGGAGCCAGATGGCGGCAGTCGAGCCCGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CCA 72 bp CCCACAGGGACTTCCCTTCCTCACTCGGGAGCTCGTTaGGGCCGTAGCGCTCCCGCGCGCCGGTCACCTGCG +
Preference number: 6 (lower is better)
Translates to: PTGTSLPHSGAR*GRSAPARRSPA
Trigger: CGCAGGTGACCGGCGCGCGGGAGCGCTACGGCCCCAACGAGCTCCCGAGTGAGGAAGGGAAGTCCCTGTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000574202.1
CDS CCA 72 bp TGCAGGCCCCCTGCCCGACCGAGGGCCAAACCGGCCTaGCCGTCCGTGCCCACCAGGAGGGAAATAGAACGC +
Preference number: 6 (lower is better)
Translates to: CRPPARPRAKPA*PSVPTRREIER
Trigger: GCGTTCTATTTCCCTCCTGGTGGGCACGGACGGCCAGGCCGGTTTGGCCCTCGGTCGGGCAGGGGGCCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572694.1
CDS GCA 72 bp TGGGACAGCTGCCGTCCAAACTCGTCCAGCTTGCGCTaGAGCGGCGTCCGCTCGGGCTCGACTGCCGCCATC +
Preference number: 6 (lower is better)
Translates to: WDSCRPNSSSLR*SGVRSGSTAAI
Trigger: GATGGCGGCAGTCGAGCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGGACGGCAGCTGTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CCA 72 bp CGCAGCCAGGAGCCACCGTGGGCCGGGTCGGCGAAGTaGCCGATGTTGATGACCCACACGGCCACGCAGATC +
Preference number: 6 (lower is better)
Translates to: RSQEPPWAGSAK*PMLMTHTATQI
Trigger: GATCTGCGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CAA 72 bp ATGGCGTGGGACAGCTGCCGTCCAAACTCGTCCAGCTaGCGCTGCAGCGGCGTCCGCTCGGGCTCGACTGCC +
Preference number: 6 (lower is better)
Translates to: MAWDSCRPNSSS*RCSGVRSGSTA
Trigger: GGCAGTCGAGCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CAA 90 bp CGCAGCCAGGAGCCACCGTGGGCCGGGTCGGCGAAGTGGCCGATGTaGATGACCCACACGGCCACGCAGATCACAGAGATGGCGTGGGAC +
Preference number: 6 (lower is better)
Translates to: RSQEPPWAGSAKWPM*MTHTATQITEMAWD
Trigger: GTCCCACGCCATCTCTGTGATCTGCGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 72 bp TCTCCACGGACGGCAGGCTTCGCACGATGGCGTTCTTaGGTGCCATGCGCCGCGTGCCCAGTGCCAGGCATG +
Preference number: 6 (lower is better)
Translates to: SPRTAGFARWRS*VPCAACPVPGM
Trigger: CATGCCTGGCACTGGGCACGCGGCGCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGCCGTCCGTGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 72 bp GCAGGCTGGAGGCGGGACGGGGCCTCCCACTCACCGTaGATGTGGTTCCGGGACAGGTACTTGAGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: AGWRRDGASHSP*MWFRDRYLRAS
Trigger: TGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGGTGAGTGGGAGGCCCCGTCCCGCCTCCAGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571245.5
CDS CCA 72 bp TGTCCCTGGCCCCGGTGTGGTCTGGGGTCCAAGAGGTaGTCAGCGGCTGCCTACTCCAGGCCTGCGAGACTG +
Preference number: 6 (lower is better)
Translates to: CPWPRCGLGSKR*SAAAYSRPARL
Trigger: CAGTCTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTCTTGGACCCCAGACCACACCGGGGCCAGGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570845.5
CDS CAA 72 bp GTCTCCACGGACGGCAGGCTTCGCACGATGGCGTTCTaGCGTGCCATGCGCCGCGTGCCCAGTGCCAGGCAT +
Preference number: 6 (lower is better)
Translates to: VSTDGRLRTMAF*RAMRRVPSARH
Trigger: ATGCCTGGCACTGGGCACGCGGCGCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGCCGTCCGTGGAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CAA 72 bp CCCAGGTCCCCTGCAGTGCAAGACCCTGCGGACACCTaGGGACCCAGCCACCAGAGCCCCTTCACACCCTCC +
Preference number: 6 (lower is better)
Translates to: PRSPAVQDPADT*GPSHQSPFTPS
Trigger: GGAGGGTGTGAAGGGGCTCTGGTGGCTGGGTCCCAAGGTGTCCGCAGGGTCTTGCACTGCAGGGGACCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS CAA 90 bp ATCACAGAGATGGCGTGGGACAGCTGCCGTCCAAACTCGTCCAGCTaGCGCTGCAGCGGCGTCCGCTCGGGCTCGACTGCCGCCATCTGG +
Preference number: 6 (lower is better)
Translates to: ITEMAWDSCRPNSSS*RCSGVRSGSTAAIW
Trigger: CCAGATGGCGGCAGTCGAGCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 72 bp CACGGACGGCAGGCTTCGCACGATGGCGTTCTTGCGTaGCATGCGCCGCGTGCCCAGTGCCAGGCATGTAGT +
Preference number: 6 (lower is better)
Translates to: HGRQASHDGVLA*HAPRAQCQACS
Trigger: ACTACATGCCTGGCACTGGGCACGCGGCGCATGGCACGCAAGAACGCCATCGTGCGAAGCCTGCCGTCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 72 bp CGAGAACGCCTCCCCGATGTGCAGACAGAGAGGCTCTaGGCTCCACACCCACAGCGTCCACTGCAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: RERLPDVQTERL*APHPQRPLQPR
Trigger: CCTGGGCTGCAGTGGACGCTGTGGGTGTGGAGCGCAGAGCCTCTCTGTCTGCACATCGGGGAGGCGTTCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS CCA 72 bp CCAGGTCCCCTGCAGTGCAAGACCCTGCGGACACCTTaGGACCCAGCCACCAGAGCCCCTTCACACCCTCCA +
Preference number: 6 (lower is better)
Translates to: PGPLQCKTLRTP*DPATRAPSHPP
Trigger: TGGAGGGTGTGAAGGGGCTCTGGTGGCTGGGTCCCAAGGTGTCCGCAGGGTCTTGCACTGCAGGGGACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS CCA 72 bp TGGAGGCGGGACGGGGCCTCCCACTCACCGTGCATGTaGTTCCGGGACAGGTACTTGAGGGCCTCATCCAGC +
Preference number: 6 (lower is better)
Translates to: WRRDGASHSPCM*FRDRYLRASSS
Trigger: GCTGGATGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGGTGAGTGGGAGGCCCCGTCCCGCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571245.5
CDS TCA 72 bp CCACAGCAGCCCCTCCTCCCTCCGCCAGCTGTGATGTaGAGGGTGTGTGTACACAGCTCTGCCTCGGGCCTG +
Preference number: 6 (lower is better)
Translates to: PQQPLLPPPAVM*RVCVHSSASGL
Trigger: CAGGCCCGAGGCAGAGCTGTGTACACACACCCTTCACATCACAGCTGGCGGAGGGAGGAGGGGCTGCTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS GCA 72 bp CCGGTGTGGTCTGGGGTCCAAGAGGTGGTCAGCGGCTaGCTACTCCAGGCCTGCGAGACTGTCCTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: PVWSGVQEVVSG*LLQACETVLRR
Trigger: CCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTCTTGGACCCCAGACCACACCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000570845.5
ENST00000571245.5
ENST00000574999.1
CDS GCA 72 bp GCAGGTGAAGACAGTGAGGCAGTGTGGCCCAAGAGGTaGTCCCGTTGCTGGCCCAGTGAGCCCAGGTCCCCT +
Preference number: 6 (lower is better)
Translates to: AGEDSEAVWPKR*SRCWPSEPRSP
Trigger: AGGGGACCTGGGCTCACTGGGCCAGCAACGGGAGCACCTCTTGGGCCACACTGCCTCACTGTCTTCACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS CCA 72 bp TATCTGGAGCACCACCACCCACTGGCGCCCGCTCAGTaGGGTCACCTGGAAAATGAGAGGCAGGGGCGGCAC +
Preference number: 6 (lower is better)
Translates to: YLEHHHPLAPAQ*GHLENERQGRH
Trigger: GTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCTCCAGATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000570773.5
ENST00000570845.5
ENST00000571245.5
ENST00000572116.1
CDS CCA 72 bp AAGAGGCCAACCCGGTGTGGTCTGGGGTCCAAGAGGTaGTCAGCGGCTGCCTACTCCAGGCCTGCGAGACTG +
Preference number: 6 (lower is better)
Translates to: KRPTRCGLGSKR*SAAAYSRPARL
Trigger: CAGTCTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTCTTGGACCCCAGACCACACCGGGTTGGCCTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309890.11
ENST00000359983.7
ENST00000397035.7
ENST00000571245.5
CDS CCA 72 bp CCGCTAACTGACTGGGATGGGGAGGCGCCTTTGGCTTaGGGGTCCGTGCTGGTGTCTCTGGGTTTCCCGTGG +
Preference number: 6 (lower is better)
Translates to: PLTDWDGEAPLA*GSVLVSLGFPW
Trigger: CCACGGGAAACCCAGAGACACCAGCACGGACCCCCAAGCCAAAGGCGCCTCCCCATCCCAGTCAGTTAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572176.1
CDS CAA 72 bp GAGCCACCGTGGGCCGGGTCGGCGAAGTGGCCGATGTaGATGACCCACACGGCCACGCAGATCACAGAGATG +
Preference number: 6 (lower is better)
Translates to: EPPWAGSAKWPM*MTHTATQITEM
Trigger: CATCTCTGTGATCTGCGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGCCGACCCGGCCCACGGTGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CAA 72 bp GCAGCGTGTCTGAGCCTGAGCCCCAATCCCGGATCTTaGCCAGGATCTGCTCCCTGGAGGTGGGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: AACLSLSPNPGS*PGSAPWRWGSG
Trigger: CCCTGACCCCCACCTCCAGGGAGCAGATCCTGGCAAAGATCCGGGATTGGGGCTCAGGCTCAGACACGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000572694.1
CDS CCA 72 bp AGGGCCTCATCCAGCAGGATGACAGGCAGAGATATCTaGAGCACCACCACCCACTGGCGCCCGCTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: RASSSRMTGRDI*STTTHWRPLSG
Trigger: CCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000570773.5
ENST00000570845.5
ENST00000571245.5
ENST00000572116.1
CDS CCA 72 bp AGCTGCACCGTGCCAGGGAGAAGCAAGGGCACAGCGTaGGAAAGGCAGACGTTCTGGAGCAGGAGTGCAGCG +
Preference number: 6 (lower is better)
Translates to: SCTVPGRSKGTA*ERQTFWSRSAA
Trigger: CGCTGCACTCCTGCTCCAGAACGTCTGCCTTTCCCACGCTGTGCCCTTGCTTCTCCCTGGCACGGTGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570773.5
CDS CAA 72 bp TCGGCGTTGCGTTCCTGCCACACGCCCACAATGGCGTaGGCCACGAGGATCAGCATGATGACCAGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SALRSCHTPTMA*ATRISMMTRGS
Trigger: GGAGCCCCTGGTCATCATGCTGATCCTCGTGGCCAACGCCATTGTGGGCGTGTGGCAGGAACGCAACGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CAA 90 bp GGACACCTTGGGACCCAGCCACCAGAGCCCCTTCACACCCTCCACTaGGTGATCCGAGAACGCCTCCCCGATGTGCAGACAGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: GHLGTQPPEPLHTLH*VIRERLPDVQTERL
Trigger: GAGCCTCTCTGTCTGCACATCGGGGAGGCGTTCTCGGATCACCAAGTGGAGGGTGTGAAGGGGCTCTGGTGGCTGGGTCCCAAGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS TCA 72 bp CTTCGCCCTCGGGGGTATACGTGGTACCCGAGATGGTaGACTCGTGCAAAAGGCAGGAGCCCGCATCGGCCT +
Preference number: 6 (lower is better)
Translates to: LRPRGYTWYPRW*TRAKGRSPHRP
Trigger: AGGCCGATGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCACGTATACCCCCGAGGGCGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000572694.1
CDS TCA 72 bp TGTCTCCACAGCAGCCCCTCCTCCCTCCGCCAGCTGTaGTGTGAAGGGTGTGTGTACACAGCTCTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: CLHSSPSSLRQL*CEGCVYTALPR
Trigger: CCGAGGCAGAGCTGTGTACACACACCCTTCACATCACAGCTGGCGGAGGGAGGAGGGGCTGCTGTGGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS TCA 72 bp CCCAGCCACCAGAGCCCCTTCACACCCTCCACTTGGTaGTCCGAGAACGCCTCCCCGATGTGCAGACAGAGA +
Preference number: 6 (lower is better)
Translates to: PSHQSPFTPSTW*SENASPMCRQR
Trigger: TCTCTGTCTGCACATCGGGGAGGCGTTCTCGGATCACCAAGTGGAGGGTGTGAAGGGGCTCTGGTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571245.5
ENST00000574999.1
CDS TCA 72 bp GGTCCGTGCTGGTGTCTCTGGGTTTCCCGTGGGCTCTaGGCTCGGCTCCCCAGGTGGGGATGTTTATTCGTG +
Preference number: 6 (lower is better)
Translates to: GPCWCLWVSRGL*ARLPRWGCLFV
Trigger: CACGAATAAACATCCCCACCTGGGGAGCCGAGCTCAGAGCCCACGGGAAACCCAGAGACACCAGCACGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572176.1
CDS GCA 72 bp TCGGGGGTATACGTGGTACCCGAGATGGTGAACTCGTaGAAAAGGCAGGAGCCCGCATCGGCCTCGGCTACC +
Preference number: 6 (lower is better)
Translates to: SGVYVVPEMVNS*KRQEPASASAT
Trigger: GGTAGCCGAGGCCGATGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCACGTATACCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000572694.1
CDS GCA 72 bp ATAGAACGCAGGGTCCAGGCTGAGGCAGGGACCGTCTaGTCTGCCAGATGTGTCCGGCTCCGGTTTGTCCCA +
Preference number: 6 (lower is better)
Translates to: IERRVQAEAGTV*SARCVRLRFVP
Trigger: TGGGACAAACCGGAGCCGGACACATCTGGCAGAGCAGACGGTCCCTGCCTCAGCCTGGACCCTGCGTTCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572694.1
CDS CCA 72 bp TGTGAGGTCCCTCGGCGTCATACACAAACCACCAGGTaGCGGCAGCCACTGTGGCCAGGCCTACGTACACTC +
Preference number: 6 (lower is better)
Translates to: CEVPRRHTQTTR*RQPLWPGLRTL
Trigger: GAGTGTACGTAGGCCTGGCCACAGTGGCTGCCGCCACCTGGTGGTTTGTGTATGACGCCGAGGGACCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000572176.1
ENST00000576957.1
CDS CCA 72 bp GCTCATTTCTTCCGGTGTGGTCTGGGGTCCAAGAGGTaGTCAGCGGCTGCCTACTCCAGGCCTGCGAGACTG +
Preference number: 6 (lower is better)
Translates to: AHFFRCGLGSKR*SAAAYSRPARL
Trigger: CAGTCTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTCTTGGACCCCAGACCACACCGGAAGAAATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352011.7
ENST00000574999.1
CDS CAA 72 bp GTGTGCAGGCCGGTGGCCACGGCCACACCCACCGCTTaGCCCGATGTGATATTGGTGCCAGAAAACAGCATG +
Preference number: 6 (lower is better)
Translates to: VCRPVATATPTA*PDVILVPENSM
Trigger: CATGCTGTTTTCTGGCACCAATATCACATCGGGCAAAGCGGTGGGTGTGGCCGTGGCCACCGGCCTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CAA 72 bp GTCCCTGGCCCGTGCATGTGGTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGGATGACAGGCAGAGAT +
Preference number: 6 (lower is better)
Translates to: VPGPCMWFRDRY*RASSSRMTGRD
Trigger: ATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGGGCCAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572116.1
CDS CAA 90 bp CCCAGCTCCGTGTGCAGGCCGGTGGCCACGGCCACACCCACCGCTTaGCCCGATGTGATATTGGTGCCAGAAAACAGCATGTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: PSSVCRPVATATPTA*PDVILVPENSMFFL
Trigger: CAAGAAGAACATGCTGTTTTCTGGCACCAATATCACATCGGGCAAAGCGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CAA 90 bp CGATGCTGTGTCCCTGGCCCGTGCATGTGGTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGGATGACAGGCAGAGATATCTGGAGC +
Preference number: 6 (lower is better)
Translates to: RCCVPGPCMWFRDRY*RASSSRMTGRDIWS
Trigger: GCTCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGGGCCAGGGACACAGCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572116.1
CDS TCA 72 bp TCAGCGGCTGCCTACTCCAGGCCTGCGAGACTGTCCTaGGAAGGCCTGGATAAAGACAGGCGTGCATGTGGT +
Preference number: 6 (lower is better)
Translates to: SAAAYSRPARLS*EGLDKDRRACG
Trigger: ACCACATGCACGCCTGTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCAGCCGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000570845.5
CDS TCA 72 bp CAGAATTGCCGTGAGGAAGATGCTGGAACAGAGTCATaGGCTCTAGCCCCGGTAGGCCTAGCCCCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: QNCREEDAGTES*ALAPVGLAPGR
Trigger: TCTGCCGGGGGCTAGGCCTACCGGGGCTAGAGCTCATGACTCTGTTCCAGCATCTTCCTCACGGCAATTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS GCA 72 bp CACAGCGTGGGAAAGGCAGACGTTCTGGAGCAGGAGTaGAGCGGCTCAGAAGGAGAACAGCTGGCATTAGCC +
Preference number: 6 (lower is better)
Translates to: HSVGKADVLEQE*SGSEGEQLALA
Trigger: GGCTAATGCCAGCTGTTCTCCTTCTGAGCCGCTGCACTCCTGCTCCAGAACGTCTGCCTTTCCCACGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570773.5
CDS CCA 72 bp CCTACTCCAGGCCTGCGAGACTGTCCTGAGAAGGCCTaGATAAAGACAGGCGTGCATGTGGTTCCGGGACAG +
Preference number: 6 (lower is better)
Translates to: PTPGLRDCPEKA*IKTGVHVVPGQ
Trigger: CTGTCCCGGAACCACATGCACGCCTGTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000570845.5
CDS TCA 72 bp CTCAGAAACAACCCTCCCCTTGACCCACCCACAAGGTaGTACCAAAGAGGCCAACCCGGTGTGGTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: LRNNPPLDPPTR*YQRGQPGVVWG
Trigger: ACCCCAGACCACACCGGGTTGGCCTCTTTGGTATCACCTTGTGGGTGGGTCAAGGGGAGGGTTGTTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571245.5
CDS TCA 72 bp TCCCTGGCCAGCCCTTGCTCACCAGCTGGTAGAAGTTaGTGTGAGGTCCCTCGGCGTCATACACAAACCACC +
Preference number: 6 (lower is better)
Translates to: SLASPCSPAGRS*CEVPRRHTQTT
Trigger: GGTGGTTTGTGTATGACGCCGAGGGACCTCACATCAACTTCTACCAGCTGGTGAGCAAGGGCTGGCCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572176.1
CDS CCA 72 bp CACCGGAGACTCCACTCTGTTCCCAGCGCTCACTTCTaGCTCATTTCTTCCGGTGTGGTCTGGGGTCCAAGA +
Preference number: 6 (lower is better)
Translates to: HRRLHSVPSAHF*LISSGVVWGPR
Trigger: TCTTGGACCCCAGACCACACCGGAAGAAATGAGCCAGAAGTGAGCGCTGGGAACAGAGTGGAGTCTCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352011.7
ENST00000574999.1
CDS CCA 72 bp CACCGGAGACTCCACTCTGTTCCCAGCGCTCACTTCTaGCTCATTTCTTCGTGCATGTGGTTCCGGGACAGG +
Preference number: 6 (lower is better)
Translates to: HRRLHSVPSAHF*LISSCMWFRDR
Trigger: CCTGTCCCGGAACCACATGCACGAAGAAATGAGCCAGAAGTGAGCGCTGGGAACAGAGTGGAGTCTCCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397041.8
ENST00000570773.5
CDS CCA 72 bp GCCCGGAGACTCCACTCTGTTCCCAGCGCTCACTTCTaGCTCATTTCTTCAAAGAGGCCAACCCGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: ARRLHSVPSAHF*LISSKRPTRCG
Trigger: ACCACACCGGGTTGGCCTCTTTGAAGAAATGAGCCAGAAGTGAGCGCTGGGAACAGAGTGGAGTCTCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397035.7
CDS CCA 72 bp CTCCCCAGGTGGGGATGTTTATTCGTGTATAGCGAGTaGGGAAGGACACTGCAGGCCACCCATGCGGCTCTA +
Preference number: 6 (lower is better)
Translates to: LPRWGCLFVYSE*GRTLQATHAAL
Trigger: TAGAGCCGCATGGGTGGCCTGCAGTGTCCTTCCCCACTCGCTATACACGAATAAACATCCCCACCTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572176.1
CDS CAA 72 bp TCCCACTCACCGTGCATGTGGTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGGATGACAGGCAGAGAT +
Preference number: 6 (lower is better)
Translates to: SHSPCMWFRDRY*RASSSRMTGRD
Trigger: ATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGGTGAGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571245.5
CDS GCA 72 bp CCACGAAGGTCAGGTCCGTCTCGTACTGCACAAACTTaGTGCAGTCGTCCAGCTCCATGTCCTCCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: PRRSGPSRTAQT*CSRPAPCPPSL
Trigger: CAAGGAAGGAGGACATGGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACGAGACGGACCTGACCTTCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 72 bp CCATCGCCAGTCATAGCAGTGATCTCGTTAAAGGACTaGAGGTTCTCCACGATGCGGGACTTGTGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: PSPVIAVISLKD*RFSTMRDLCAG
Trigger: GCCCGCACACAAGTCCCGCATCGTGGAGAACCTGCAGTCCTTTAACGAGATCACTGCTATGACTGGCGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS GCA 72 bp CCTTCCCCAGTCCCAGCTCTGGATCCTGGACATACCTaGTCTTTAGGCCTAGCAGAGGCCAAGTACACACAC +
Preference number: 6 (lower is better)
Translates to: PSPVPALDPGHT*SLGLAEAKYTH
Trigger: GTGTGTGTACTTGGCCTCTGCTAGGCCTAAAGAGCAGGTATGTCCAGGATCCAGAGCTGGGACTGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS CCA 72 bp CACCGGAGACTCCACTCTGTTCCCAGCGCTCACTTCTaGCTCATTTCTTCAAAGAGGCCAACCCGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: HRRLHSVPSAHF*LISSKRPTRCG
Trigger: ACCACACCGGGTTGGCCTCTTTGAAGAAATGAGCCAGAAGTGAGCGCTGGGAACAGAGTGGAGTCTCCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309890.11
CDS CAA 90 bp GCTCACTTCTGGCTCATTTCGTGCATGTGGTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGGATGACAGGCAGAGATATCTGGAGC +
Preference number: 6 (lower is better)
Translates to: AHFWLISCMWFRDRY*RASSSRMTGRDIWS
Trigger: GCTCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGAAATGAGCCAGAAGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397043.7
CDS TCA 72 bp CGGTGGCCACGGCCACACCCACCGCTTTGCCCGATGTaGTATTGGTGCCAGAAAACAGCATGTTCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: RWPRPHPPLCPM*YWCQKTACSSC
Trigger: ACAAGAAGAACATGCTGTTTTCTGGCACCAATATCACATCGGGCAAAGCGGTGGGTGTGGCCGTGGCCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
CDS CCA 72 bp TGCACATTTCAATGGTCACGAGCACGGACAAGGCCATaGTGGTGGGGAAGCGTGACTCGAACACCTCACAGT +
Preference number: 6 (lower is better)
Translates to: CTFQWSRARTRP*WWGSVTRTPHS
Trigger: ACTGTGAGGTGTTCGAGTCACGCTTCCCCACCACCATGGCCTTGTCCGTGCTCGTGACCATTGAAATGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000570773.5
ENST00000571245.5
ENST00000576957.1
CDS CAA 72 bp TGGCTCATTTCGTGCATGTGGTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGGATGACAGGCAGAGAT +
Preference number: 6 (lower is better)
Translates to: WLISCMWFRDRY*RASSSRMTGRD
Trigger: ATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGAAATGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397043.7
CDS CAA 90 bp CACTTCTGGCTCATTTCTTCGTGCATGTGGTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGGATGACAGGCAGAGATATCTGGAGC +
Preference number: 6 (lower is better)
Translates to: HFWLISSCMWFRDRY*RASSSRMTGRDIWS
Trigger: GCTCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGAAGAAATGAGCCAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397041.8
ENST00000570773.5
CDS TCA 72 bp CGGAGCACTTCAGGAAGTTCCTCAGCTGGTAGAAGTTaGTGTGAGGTCCCTCGGCGTCATACACAAACCACC +
Preference number: 6 (lower is better)
Translates to: RSTSGSSSAGRS*CEVPRRHTQTT
Trigger: GGTGGTTTGTGTATGACGCCGAGGGACCTCACATCAACTTCTACCAGCTGAGGAACTTCCTGAAGTGCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309890.11
ENST00000352011.7
ENST00000359983.7
ENST00000397035.7
ENST00000397041.8
ENST00000397043.7
ENST00000576957.1
CDS GCA 72 bp TCCCCACAGGCATCCTCACATGTGAATACGAGTGTGTaGACAGTCACACGCCGGCACAAATCCTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SPQASSHVNTSV*TVTRRHKSFCL
Trigger: CAAGCAGAAGGATTTGTGCCGGCGTGTGACTGTGCACACACTCGTATTCACATGTGAGGATGCCTGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS CAA 72 bp CTCATTTCTTCGTGCATGTGGTTCCGGGACAGGTACTaGAGGGCCTCATCCAGCAGGATGACAGGCAGAGAT +
Preference number: 6 (lower is better)
Translates to: LISSCMWFRDRY*RASSSRMTGRD
Trigger: ATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTCCCGGAACCACATGCACGAAGAAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397041.8
ENST00000570773.5
CDS CAA 72 bp GTGTGCACAGTCACACGCCGGCACAAATCCTTCTGCTaGTACTCACGCTCAAAATGCACCAGAGCACACATG +
Preference number: 6 (lower is better)
Translates to: VCTVTRRHKSFC*YSRSKCTRAHM
Trigger: CATGTGTGCTCTGGTGCATTTTGAGCGTGAGTACAAGCAGAAGGATTTGTGCCGGCGTGTGACTGTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS GCA 72 bp AGCAAACACCTACATATCTGCCCTGAGGTGCAGAGATaGAGAATCCATCCATGTCCAGCAACACACACGCTC +
Preference number: 6 (lower is better)
Translates to: SKHLHICPEVQR*RIHPCPATHTL
Trigger: GAGCGTGTGTGTTGCTGGACATGGATGGATTCTGCATCTCTGCACCTCAGGGCAGATATGTAGGTGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS GCA 72 bp CAAACACAAGCAAACACCTACATATCTGCCCTGAGGTaGAGAGATGCAGAATCCATCCATGTCCAGCAACAC +
Preference number: 6 (lower is better)
Translates to: QTQANTYISALR*RDAESIHVQQH
Trigger: GTGTTGCTGGACATGGATGGATTCTGCATCTCTGCACCTCAGGGCAGATATGTAGGTGTTTGCTTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS CAA 90 bp AATACGAGTGTGTGCACAGTCACACGCCGGCACAAATCCTTCTGCTaGTACTCACGCTCAAAATGCACCAGAGCACACATGCAAAATATA +
Preference number: 6 (lower is better)
Translates to: NTSVCTVTRRHKSFC*YSRSKCTRAHMQNI
Trigger: TATATTTTGCATGTGTGCTCTGGTGCATTTTGAGCGTGAGTACAAGCAGAAGGATTTGTGCCGGCGTGTGACTGTGCACACACTCGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576957.1
CDS GCA 72 bp CGGCACAAATCCTTCTGCTTGTACTCACGCTCAAAATaGACCAGAGCACACATGCAAAATATACACATTACA +
Preference number: 6 (lower is better)
Translates to: RHKSFCLYSRSK*TRAHMQNIHIT
Trigger: TGTAATGTGTATATTTTGCATGTGTGCTCTGGTGCATTTTGAGCGTGAGTACAAGCAGAAGGATTTGTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576957.1