RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000174437

Ensembl transcript IDs: ENST00000308664.10, ENST00000313432.5, ENST00000377685.9, ENST00000539276.7, ENST00000547050.1, ENST00000547792.1, ENST00000550262.1, ENST00000552636.2, ENST00000553144.1

Found 750 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGCTGCGCCCGAGTCACATGGCAGGCGCCACAGGCAACCCCGGTaGTCACAGGGCATCAGGGAGCACAGCAGCATCTGCCATGGAGGC +
Preference number: 1 (lower is better)
Translates to: DAAPESHGRRHRQPR*SQGIREHSSICHGG
Trigger: GCCTCCATGGCAGATGCTGCTGTGCTCCCTGATGCCCTGTGAGCACCGGGGTTGCCTGTGGCGCCTGCCATGTGACTCGGGCGCAGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 90 bp TGTCCCTGCCCTGTGGGCACCCGGCTTCTGGCTGCTCGCCTGCCTTaGCTAGCCCTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAGT +
Preference number: 1 (lower is better)
Translates to: CPCPVGTRLLAARLP*LALERKLLRIILLS
Trigger: ACTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTGCCCACAGGGCAGGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 90 bp GGCCCTGCTCAAAACAGCAGTGGGCCTAACCCACTCCCAGCTGTCTaGACCAAGGGAAGTGGGTCCCTCCATGGGCTCCTCTGTGGGCTG +
Preference number: 1 (lower is better)
Translates to: GPAQNSSGPNPLPAV*TKGSGSLHGLLCGL
Trigger: CAGCCCACAGAGGAGCCCATGGAGGGACCCACTTCCCTTGGTCCAGACAGCTGGGAGTGGGTTAGGCCCACTGCTGTTTTGAGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 90 bp GGGGATGTGGGAGCAGCTGTTGTGAGGGAAGTCGGCCAGATGCCCTaGTTGCCTGGGAGCTCACTGAGCTCAAGGGACAGCTTCCTCCAG +
Preference number: 1 (lower is better)
Translates to: GDVGAAVVREVGQMP*LPGSSLSSRDSFLQ
Trigger: CTGGAGGAAGCTGTCCCTTGAGCTCAGTGAGCTCCCAGGCAAGCAGGGCATCTGGCCGACTTCCCTCACAACAGCTGCTCCCACATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR TCA 90 bp AGCTCAGAGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTaGTGGCTGGGCCTTCAGCCACCTGCCCATCAGGAAAGAATGTGG +
Preference number: 1 (lower is better)
Translates to: SSERPREARGGNKRH*WLGLQPPAHQERMW
Trigger: CCACATTCTTTCCTGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCTCTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 90 bp GGGAGCAGCTGTTGTGAGGGAAGTCGGCCAGATGCCCTGCTTGCCTaGGAGCTCACTGAGCTCAAGGGACAGCTTCCTCCAGAATGGATC +
Preference number: 1 (lower is better)
Translates to: GSSCCEGSRPDALLA*ELTELKGQLPPEWI
Trigger: GATCCATTCTGGAGGAAGCTGTCCCTTGAGCTCAGTGAGCTCCCAGGCAAGCAGGGCATCTGGCCGACTTCCCTCACAACAGCTGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 90 bp GGTGGTTACAGTCACAGGGCAACTGCTGGCTCTGCTCACAGGCACTaGAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTTG +
Preference number: 1 (lower is better)
Translates to: GGYSHRATAGSAHRH*RRGMLWPWTVARCL
Trigger: CAAGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGACTGTAACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 90 bp GTAGAAGGACACTCTTGGACCACCGTCAGCAGCAATGAACCACCATaGAGCAGCACCCACGGTAGCAGCGCCGACGTAACAGCCAATAGC +
Preference number: 1 (lower is better)
Translates to: VEGHSWTTVSSNEPP*SSTHGSSADVTANS
Trigger: GCTATTGGCTGTTACGTCGGCGCTGCTACCGTGGGTGCTGCTGCATGGTGGTTCATTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR GCA 90 bp GCAGCGGGTGTTTGGACAATTTGGTGGTTACAGTCACAGGGCAACTaGTGGCTCTGCTCACAGGCACTGCAGACGTGGTATGCTCTGGCC +
Preference number: 1 (lower is better)
Translates to: AAGVWTIWWLQSQGN*WLCSQALQTWYALA
Trigger: GGCCAGAGCATACCACGTCTGCAGTGCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGACTGTAACCACCAAATTGTCCAAACACCCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 90 bp GCAACTGCTGGCTCTGCTCACAGGCACTGCAGACGTGGTATGCTCTaGCCCTGGACAGTGGCTAGATGCTTGGTAGACACTGAGCTAATC +
Preference number: 1 (lower is better)
Translates to: ATAGSAHRHCRRGML*PWTVARCLVDTELI
Trigger: GATTAGCTCAGTGTCTACCAAGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAGCAGAGCCAGCAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 90 bp CCATCCCTTGAACGTGGGCCCTCTGAACTCAGCAGCACCTTGTCCTaGTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATT +
Preference number: 1 (lower is better)
Translates to: PSLERGPSELSSTLS*LMPPNPPQTPTICI
Trigger: AATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAAGGTGCTGCTGAGTTCAGAGGGCCCACGTTCAAGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 90 bp GTTTGGACAATTTGGTGGTTACAGTCACAGGGCAACTGCTGGCTCTaGTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGT +
Preference number: 1 (lower is better)
Translates to: VWTIWWLQSQGNCWL*SQALQTWYALALDS
Trigger: ACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGACTGTAACCACCAAATTGTCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 90 bp CCCTGGACAGTGGCTAGATGCTTGGTAGACACTGAGCTAATCTTGTaGTCTCAGGTCTTAGGTCTGCCCACCTCAGTCAGGGCTGAAGCT +
Preference number: 1 (lower is better)
Translates to: PWTVARCLVDTELIL*SQVLGLPTSVRAEA
Trigger: AGCTTCAGCCCTGACTGAGGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCATCTAGCCACTGTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 90 bp AGCCTACCCTTCTTGCTAACTGCAGCGGGTGTTTGGACAATTTGGTaGTTACAGTCACAGGGCAACTGCTGGCTCTGCTCACAGGCACTG +
Preference number: 1 (lower is better)
Translates to: SLPFLLTAAGVWTIW*LQSQGNCWLCSQAL
Trigger: CAGTGCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGACTGTAACCACCAAATTGTCCAAACACCCGCTGCAGTTAGCAAGAAGGGTAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR TCA 90 bp GCTCTGGAGGAAAACCCCATGAGGCAGACACAATCGTTGCAGCTGTaGAAGCAGCGAGACAGGCAAGAGGACAAGGTCTTGGTTAGTGGT +
Preference number: 1 (lower is better)
Translates to: ALEENPMRQTQSLQL*KQRDRQEDKVLVSG
Trigger: ACCACTAACCAAGACCTTGTCCTCTTGCCTGTCTCGCTGCTTTCACAGCTGCAACGATTGTGTCTGCCTCATGGGGTTTTCCTCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 90 bp AGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATaGTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGT +
Preference number: 1 (lower is better)
Translates to: RHCRRGMLWPWTVAR*LVDTELILWSQVLG
Trigger: ACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 90 bp CTTGCCTGGGAGCTCACTGAGCTCAAGGGACAGCTTCCTCCAGAATaGATCATCTGCATTCTGCAGAGTGGTGTCCCAGTTAGGGTATGT +
Preference number: 1 (lower is better)
Translates to: LAWELTELKGQLPPE*IICILQSGVPVRVC
Trigger: ACATACCCTAACTGGGACACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCTCAGTGAGCTCCCAGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 90 bp GCATCTAGAAGCACTGGCTCAGTGACACAGACTCCTCGTGTCGTCTaGCTACAGAATAAAGGCTCTGGAGGAAAACCCCATGAGGCAGAC +
Preference number: 1 (lower is better)
Translates to: ASRSTGSVTQTPRVV*LQNKGSGGKPHEAD
Trigger: GTCTGCCTCATGGGGTTTTCCTCCAGAGCCTTTATTCTGTAGCCAGACGACACGAGGAGTCTGTGTCACTGAGCCAGTGCTTCTAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR TCA 90 bp GGATCATCTGCATTCTGCAGAGTGGTGTCCCAGTTAGGGTATGTATaGTTGTTGGTCTTCTGGGCAAAGCTCAGAGAGGCCAAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: GSSAFCRVVSQLGYV*LLVFWAKLREAKGG
Trigger: GCCTCCCTTGGCCTCTCTGAGCTTTGCCCAGAAGACCAACAATCATACATACCCTAACTGGGACACCACTCTGCAGAATGCAGATGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR TCA 90 bp CTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAGTAAAGGAGGGTaGAGCCTACCCTTCTTGCTAACTGCAGCGGGTGTTTGGACAATT +
Preference number: 1 (lower is better)
Translates to: LERKLLRIILLSKGG*SLPFLLTAAGVWTI
Trigger: AATTGTCCAAACACCCGCTGCAGTTAGCAAGAAGGGTAGGCTTCACCCTCCTTTACTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTaGATTACATCTACTGGCCATCCCAGTAACCAGAGCCTAAGTACA +
Preference number: 1 (lower is better)
Translates to: LSCLMPPNPPQTPTI*ITSTGHPSNQSLST
Trigger: TGTACTTAGGCTCTGGTTACTGGGATGGCCAGTAGATGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 90 bp CACCATTTCATCCCGGATCTTGCCAATTTCGGTGTTAACTCCAGTTaGTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACC +
Preference number: 1 (lower is better)
Translates to: HHFIPDLANFGVNSS*YHHSHSFPSSNVCT
Trigger: GGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGGAGTTAACACCGAAATTGGCAAGATCCGGGATGAAATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR GCA 90 bp GAGCTCACTGAGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTaGATTCTGCAGAGTGGTGTCCCAGTTAGGGTATGTATGATTGTT +
Preference number: 1 (lower is better)
Translates to: ELTELKGQLPPEWII*ILQSGVPVRVCMIV
Trigger: AACAATCATACATACCCTAACTGGGACACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCTCAGTGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 90 bp TTGACTCCAGAGGTCATAGGAACCTTAGTACTTCCAACTCGAATGTaGGTGCACCTGTCAATGACACCTTCAGGAGCACCCTTCACAAAC +
Preference number: 1 (lower is better)
Translates to: LTPEVIGTLVLPTRM*VHLSMTPSGAPFTN
Trigger: GTTTGTGAAGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCCACATTCGAGTTGGAAGTACTAAGGTTCCTATGACCTCTGGAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR GCA 90 bp GTTTTGTTTGCACGGAATAGCAATAGTGCAGCACTCAAGTCAGTTTaGAGCCCAGAGATGCACTCCTTGCATTTGGCCCATTCAACCCAT +
Preference number: 1 (lower is better)
Translates to: VLFARNSNSAALKSV*SPEMHSLHLAHSTH
Trigger: ATGGGTTGAATGGGCCAAATGCAAGGAGTGCATCTCTGGGCTGCAAACTGACTTGAGTGCTGCACTATTGCTATTCCGTGCAAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR TCA 90 bp TCACAGATGACAATTAGTGCCTGTACATTAAGAATACAATTCCTATaGCTACCTACACAGCAGAGCAGGAGCCTTCTTCCCCTCAAGCAG +
Preference number: 1 (lower is better)
Translates to: SQMTISACTLRIQFL*LPTQQSRSLLPLKQ
Trigger: CTGCTTGAGGGGAAGAAGGCTCCTGCTCTGCTGTGTAGGTAGTCATAGGAATTGTATTCTTAATGTACAGGCACTAATTGTCATCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
3UTR TCA 90 bp TCGTTCACGCCATCGCCAGTCATAGCTGTAATCTCATCAAAAGACTaGAGAAATTCTACGATTTTAGACTTGTGGGAGGGTTCAACTCGA +
Preference number: 1 (lower is better)
Translates to: SFTPSPVIAVISSKD*RNSTILDLWEGSTR
Trigger: TCGAGTTGAACCCTCCCACAAGTCTAAAATCGTAGAATTTCTTCAGTCTTTTGATGAGATTACAGCTATGACTGGCGATGGCGTGAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR GCA 90 bp ACGGCTTCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTaGAGCAAAGAAACCAAACTTCTCTGGAGAGGCTTTCTGATTAAG +
Preference number: 1 (lower is better)
Translates to: TASKFLDKVTEPHSS*SKETKLLWRGFLIK
Trigger: CTTAATCAGAAAGCCTCTCCAGAGAAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGAAGCCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR GCA 90 bp CACCTTCAGGAGCACCCTTCACAAACATCTTGCTCATTGATGTCCTaGTTGGTTTATTTGGTGTACAGTAAACCGACATTGACTTTCTGT +
Preference number: 1 (lower is better)
Translates to: HLQEHPSQTSCSLMS*LVYLVYSKPTLTFC
Trigger: ACAGAAAGTCAATGTCGGTTTACTGTACACCAAATAAACCAAGCAGGACATCAATGAGCAAGATGTTTGTGAAGGGTGCTCCTGAAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CCA 90 bp CAAACTGTACAGGGCCAATTAAAAAGTAGCATGTTCCAATGTCACTaGAGAGGGATCTGGCTACTTACAACCGAAGGCATGCATTACAAT +
Preference number: 1 (lower is better)
Translates to: QTVQGQLKSSMFQCH*RGIWLLTTEGMHYN
Trigger: ATTGTAATGCATGCCTTCGGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAATTGGCCCTGTACAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR GCA 90 bp ATTTCTACAATATCACCAGGAACTATGTCTTTAGCTTTAATCCGCTaGACACTCTTTCTGTCCTGTCGATACACTTTGCCCATTTCAGGC +
Preference number: 1 (lower is better)
Translates to: ISTISPGTMSLALIR*TLFLSCRYTLPISG
Trigger: GCCTGAAATGGGCAAAGTGTATCGACAGGACAGAAAGAGTGTGCAGCGGATTAAAGCTAAAGACATAGTTCCTGGTGATATTGTAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CCA 90 bp GTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTCTCTaGAGAGGCTTTCTGATTAAGCTAAATTGTACATCTGTAATCAGT +
Preference number: 1 (lower is better)
Translates to: VTEPHSSCSKETKLL*RGFLIKLNCTSVIS
Trigger: ACTGATTACAGATGTACAATTTAGCTTAATCAGAAAGCCTCTCCAGAGAAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR CCA 90 bp TACATTTATATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTaGCTGACGGCTTCCAAGTTCTTAGATAAGGTTACAGAGCCTCAT +
Preference number: 1 (lower is better)
Translates to: YIYISYDILQRNVAT*LTASKFLDKVTEPH
Trigger: ATGAGGCTCTGTAACCTTATCTAAGAACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTATATAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR GCA 90 bp ATACACACTTGCCCTTATGTTCTCTATACCAGGCCAGCAGAAACTTaGATAAAATGTACATCACAGATGACAATTAGTGCCTGTACATTA +
Preference number: 1 (lower is better)
Translates to: IHTCPYVLYTRPAET*IKCTSQMTISACTL
Trigger: TAATGTACAGGCACTAATTGTCATCTGTGATGTACATTTTATGCAAGTTTCTGCTGGCCTGGTATAGAGAACATAAGGGCAAGTGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
3UTR TCA 90 bp CACTGGTTTATCATCTTTATGCACTTCTCCAATAGGTGCATAAGTTaGTCCAGTTATGGTAAACTCATTAAGGGAACAAGTATCACCTTC +
Preference number: 1 (lower is better)
Translates to: HWFIIFMHFSNRCIS*SSYGKLIKGTSITF
Trigger: GAAGGTGATACTTGTTCCCTTAATGAGTTTACCATAACTGGATCAACTTATGCACCTATTGGAGAAGTGCATAAAGATGATAAACCAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR TCA 90 bp CAAAGAGCACAAATTGTTGCTAATTCTACCAGACCATCATACTGGTaGCAATTCACTGGTTTATCATCTTTATGCACTTCTCCAATAGGT +
Preference number: 1 (lower is better)
Translates to: QRAQIVANSTRPSYW*QFTGLSSLCTSPIG
Trigger: ACCTATTGGAGAAGTGCATAAAGATGATAAACCAGTGAATTGTCACCAGTATGATGGTCTGGTAGAATTAGCAACAATTTGTGCTCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CAA 90 bp CTGTCCCTGCCCTGTGGGCACCCGGCTTCTGGCTGCTCGCCTGCCTaGCCTAGCCCTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LSLPCGHPASGCSPA*PSPGEETPPHHSPQ
Trigger: CTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTGCCCACAGGGCAGGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR TCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCTGCCTCACTGTTAGGTaGGGGCCTGAGGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFCLTVR*GPEARD
Trigger: ATCCCTGGCCTCAGGCCCTCACCTAACAGTGAGGCA...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR TCA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCACAGGCAAGAGCTGCCTaGCAGCAGGCACATTGCGGG +
Preference number: 2 (lower is better)
Translates to: TGWQQATLMAGPSATCPSQARAA*QQAHCG
Trigger: CCCGCAATGTGCCTGCTGTCAGGCAGCTCTTGCCTG...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCGCCCCAAATGTTCCCTaGTGGGCAAAGCAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFAPNVP*WAKQPP
Trigger: GGGAGGCTGCTTTGCCCAGCAGGGAACATTTGGGGC...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCAACTCCGGCTTTTGTCTaGCTTGGGCCCTCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: TGWQQATLMAGPSATCPSTPAFV*LGPSWS
Trigger: TGACCAGGAGGGCCCAAGCCAGACAAAAGCCGGAGT...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCCCAAATGTTCCCTGCTaGGCAAAGCAGCCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFPNVPC*AKQPPF
Trigger: GAAGGGAGGCTGCTTTGCCCAGCAGGGAACATTTGG...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCCCACGGTGCTGGACCTaGTCTTTATGGGTTGACCTG +
Preference number: 2 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFPRCWT*SLWVDL
Trigger: CAGGTCAACCCATAAAGACCAGGTCCAGCACCGTGG...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp GGTCTGGCTGAAATGCCTCTCTCCCCACTCCGGCTTTTGTCTGGCTaGGGCCCTCCTGGTCATCTTGTCCTAGGCAGCCTGTGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: GLAEMPLSPLRLLSG*GPPGHLVLGSLWRS
Trigger: AGACCTCCACAGGCTGCCTAGGACAAGATGACCAGGAGGGCCCAAGCCAGACAAAAGCCGGAGTGGGGAGAGAGGCATTTCAGCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp CAGCCTGTTGGTCTGGCTGAAATGCCTCTCTCCCCACTCCGGCTTTaGTCTGGCTTGGGCCCTCCTGGTCATCTTGTCCTAGGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: QPVGLAEMPLSPLRL*SGLGPPGHLVLGSL
Trigger: CAGGCTGCCTAGGACAAGATGACCAGGAGGGCCCAAGCCAGACAAAAGCCGGAGTGGGGAGAGAGGCATTTCAGCCAGACCAACAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp TTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACACAGGCAACCCCGGTaGTCACAGGGCATCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LRVGLQVPPPSLERGPSEHRQPR*SQGIRE
Trigger: CTCCCTGATGCCCTGTGAGCACCGGGGTTGCCTGTG...TTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp CCACGGACTGTGCTTTTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAATGCGCCCGAGTCACATaGCAGGCGCCACAGGCAACC +
Preference number: 2 (lower is better)
Translates to: PRTVLLRVGLQVPPPSLECARVT*QAPQAT
Trigger: GGTTGCCTGTGGCGCCTGCCATGTGACTCGGGCGCA...TTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAAAAGCACAGTCCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp CTGGGCAAAGCTCAGAGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTAGAAATGTGGCGACTTaGCTGACGGCTTCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: LGKAQRGQGRHGVATSDTRNVAT*LTASKF
Trigger: GAACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCT...AGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCTCTGAGCTTTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR TCA 90 bp CTGCCTTGCCTAGCCCTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAGTAAAGCACCTTGTCCTGCTTaGTGCCTCCTAACCCTCCCC +
Preference number: 2 (lower is better)
Translates to: LPCLALERKLLRIILLSKAPCPA*CLLTLP
Trigger: GGGGAGGGTTAGGAGGCATCAAGCAGGACAAGGTGC...TTTACTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp CTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTCCAAGACCACGGTGCTaGACCTGGTCTTTATGGGTT +
Preference number: 2 (lower is better)
Translates to: LTGTADVVCSGPGQWLDAPRPRC*TWSLWV
Trigger: AACCCATAAAGACCAGGTCCAGCACCGTGGTCTTGG...AGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp CAAGGTTTCAAGACCAGCATTTCTGATTTACTGTCCCTGAGGTGCCGCCCACACAGCGACACTGATGGCTaGGCCTTCAGCCACCTGCCC +
Preference number: 2 (lower is better)
Translates to: QGFKTSISDLLSLRCRPHSDTDG*AFSHLP
Trigger: GGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCT...GTGTGGGCGGCACCTCAGGGACAGTAAATCAGAAATGCTGGTCTTGAAACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp CTGCCTTGCCTAGCCCTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAGTAAATCACAGGGCAACTGCTaGCTCTGCTCACAGGCACTG +
Preference number: 2 (lower is better)
Translates to: LPCLALERKLLRIILLSKSQGNC*LCSQAL
Trigger: CAGTGCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGA...TTTACTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp TCCCTTGAACGTGGGCCCTCTGAACTCAGCAGCACCTTGTCCTGCTaGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACA +
Preference number: 2 (lower is better)
Translates to: SLERGPSELSSTLSC*MPPNPPQTPTICIT
Trigger: TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAAGGTGCTGCTGAGTTCAGAGGGCCCACGTTCAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp TGGCCCTGGACAGTGGCTAGATGCTTGGTAGACACTGAGCTAATCTaGTGGTCTCAGGTCTTAGGTCTGCCCACCTCAGTCAGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: WPWTVARCLVDTELI*WSQVLGLPTSVRAE
Trigger: TTCAGCCCTGACTGAGGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCATCTAGCCACTGTCCAGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp GTGAAGCCTACCCTTCTTGCTAACTGCAGCGGGTGTTTGGACAATTaGGTGGTTACAGTCACAGGGCAACTGCTGGCTCTGCTCACAGGC +
Preference number: 2 (lower is better)
Translates to: VKPTLLANCSGCLDN*VVTVTGQLLALLTG
Trigger: GCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGACTGTAACCACCAAATTGTCCAAACACCCGCTGCAGTTAGCAAGAAGGGTAGGCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCTGGAGCAAGTGGCCCTaGTCAAAACAGCAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: CLVDTELILWSQVLGLPTWSKWP*SKQQWA
Trigger: GGCCCACTGCTGTTTTGAGCAGGGCCACTTGCTCCA...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp AGCACCATCAGCCACTGGGTCACGTTCAGCGGTGTGATCTGGAAGATGAGTGGCGTAGAAGGACACTCTTaGACCACCGTCAGCAGCAAT +
Preference number: 2 (lower is better)
Translates to: STISHWVTFSGVIWKMSGVEGHS*TTVSSN
Trigger: ATTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTAC...GCCACTCATCTTCCAGATCACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CCA 90 bp TTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAATTCAGCCTGTTGGTCTaGCTGAAATGCCTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LRVGLQVPPPSLERGPSEFSLLV*LKCLSP
Trigger: GGGAGAGAGGCATTTCAGCCAGACCAACAGGCTGAA...TTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp CACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTaGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTG +
Preference number: 2 (lower is better)
Translates to: HCRRGMLWPWTVARC*VDTELILWSQVLGL
Trigger: CAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR TCA 90 bp CTGGGCAAAGCTCAGAGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTATAGATTTATTTACCTaGAACCATGTCTGTGCGACG +
Preference number: 2 (lower is better)
Translates to: LGKAQRGQGRHGVATSDTIDLFT*NHVCAT
Trigger: CGTCGCACAGACATGGTTTCAGGTAAATAAATCTAT...AGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCTCTGAGCTTTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR TCA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGCTCAGTGGGTTGTCATaGGTGGCCAGGGCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRLSGLS*VARARH
Trigger: ATGCCTGGCCCTGGCCACTCATGACAACCCACTGAG...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR TCA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCAGCAATGTTCTGGGATaGCTCCTGGCAGCTGCGAAC +
Preference number: 2 (lower is better)
Translates to: CLVDTELILWSQVLGLPTSNVLG*LLAAAN
Trigger: GTTCGCAGCTGCCAGGAGTCATCCCAGAACATTGCT...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp TTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACCCCAACATCAGTCATaGACAGGGTTGGTAGATGTG +
Preference number: 2 (lower is better)
Translates to: LRVGLQVPPPSLERGPSEPQHQS*TGLVDV
Trigger: CACATCTACCAACCCTGTGCATGACTGATGTTGGGG...TTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp CAAGAGGACAAGGTCTTGGTTAGTGGTGCAGAGGGTGAGGTTGATGGAGAAGTGGTGCCAAGACCACGGTaGTGGACCTGGTCTTTATGG +
Preference number: 2 (lower is better)
Translates to: QEDKVLVSGAEGEVDGEVVPRPR*WTWSLW
Trigger: CCATAAAGACCAGGTCCAGCACCGTGGTCTTGGCAC...CACTTCTCCATCAACCTCACCCTCTGCACCACTAACCAAGACCTTGTCCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCGTCGGCCAGATGCCCTaGTTGCCTGGGAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSVGQMP*LPGSSL
Trigger: CAGTGAGCTCCCAGGCAAGCAGGGCATCTGGCCGAC...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp GTCAGCAGCAATGAACCACCATGCAGCAGCACCCACGGTAGCAGCGCCGACGTACCTGTGAGAATTGACTaGTCAACTCTTAGTGTGGTA +
Preference number: 2 (lower is better)
Translates to: VSSNEPPCSSTHGSSADVPVRID*STLSVV
Trigger: TACCACACTAAGAGTTGACCAGTCAATTCTCACAGG...TACGTCGGCGCTGCTACCGTGGGTGCTGCTGCATGGTGGTTCATTGCTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR TCA 90 bp AGCACCATCAGCCACTGGGTCACGTTCAGCGGTGTGATCTGGAAGATGAGTGGCGAACATCCTGCAGACTaGCATCTGGTTTGTTGTAAG +
Preference number: 2 (lower is better)
Translates to: STISHWVTFSGVIWKMSGEHPAD*HLVCCK
Trigger: CTTACAACAAACCAGATGTCAGTCTGCAGGATGTTC...GCCACTCATCTTCCAGATCACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR GCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAACACCCGGCTTCTGGCTaGTCGCCTGCCTTGCCTAGC +
Preference number: 2 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEHPASG*SPALPS
Trigger: GCTAGGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTG...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCTTCTGGGATGACTCCTaGCAGCTGCGAACCCTCATT +
Preference number: 2 (lower is better)
Translates to: CLVDTELILWSQVLGLPTFWDDS*QLRTLI
Trigger: AATGAGGGTTCGCAGCTGCCAGGAGTCATCCCAGAA...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAAGGCACATTGCGGGGCTaGGCAGCTGCTGCCTCACTG +
Preference number: 2 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEGTLRG*AAAASL
Trigger: CAGTGAGGCAGCAGCTGCCCAGCCCCGCAATGTGCC...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp AGCACCATCAGCCACTGGGTCACGTTCAGCGGTGTGATCTGGAAGATGAGTGGCTCAGCATTTCTTTCCTaGCATACACCCACAATTGCA +
Preference number: 2 (lower is better)
Translates to: STISHWVTFSGVIWKMSGSAFLS*HTPTIA
Trigger: TGCAATTGTGGGTGTATGGCAGGAAAGAAATGCTGA...GCCACTCATCTTCCAGATCACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CCA 90 bp AGCACCATCAGCCACTGGGTCACGTTCAGCGGTGTGATCTGGAAGATGAGTGGCCATTGTCATCGGGTATaGGGATTCAAAGATTGCACA +
Preference number: 2 (lower is better)
Translates to: STISHWVTFSGVIWKMSGHCHRV*GFKDCT
Trigger: TGTGCAATCTTTGAATCCCCATACCCGATGACAATG...GCCACTCATCTTCCAGATCACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CCA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGCACCATCAGCCACTaGGTCACGTTCAGCGGTGTG +
Preference number: 2 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSSTISH*VTFSGV
Trigger: CACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACCACTCCCAGCTGTCTaGACCAAGGGAAGTGGGTCC +
Preference number: 2 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGPLPAV*TKGSGS
Trigger: GGACCCACTTCCCTTGGTCCAGACAGCTGGGAGTGG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCGTGAAATGGAGCAAGTaGCCCTGCTCAAAACAGCAG +
Preference number: 2 (lower is better)
Translates to: CLVDTELILWSQVLGLPTVKWSK*PCSKQQ
Trigger: CTGCTGTTTTGAGCAGGGCCACTTGCTCCATTTCAC...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGGGCCTTCAGCCACCTaGCCATCAGGAAAGAATGTG +
Preference number: 2 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHGPSAT*PSGKNV
Trigger: CACATTCTTTCCTGATGGGCAGGTGGCTGAAGGCCC...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACAGTCACAGGGCAACTaGTGGCTCTGCTCACAGGCA +
Preference number: 2 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGQSQGN*WLCSQA
Trigger: TGCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGACTG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAAGGGAGGCACGGGGTaGCAACAAGCGACACTGATG +
Preference number: 2 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGKGGTG*QQATLM
Trigger: CATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTT...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp CTAGAACAGAGAGCGCCATTGTCATCGGGTATGGGGATTCAAAGATaGCACAATCCACGCCTTCAAAGTCCGGGTTGTCCTCTTTACACT +
Preference number: 2 (lower is better)
Translates to: LEQRAPLSSGMGIQR*HNPRLQSPGCPLYT
Trigger: AGTGTAAAGAGGACAACCCGGACTTTGAAGGCGTGGATTGTGCAATCTTTGAATCCCCATACCCGATGACAATGGCGCTCTCTGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR TCA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATCAATCGTTGCAGCTGTaGAAGCAGCGAGACAGGCAA +
Preference number: 2 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHQSLQL*KQRDRQ
Trigger: TTGCCTGTCTCGCTGCTTTCACAGCTGCAACGATTG...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp AGATTGCACAATCCACGCCTTCAAAGTCCGGGTTGTCCTCTTTACACTGTAGGACCCCAACATCAGTCATaGACAGGGTTGGTAGATGTG +
Preference number: 2 (lower is better)
Translates to: RLHNPRLQSPGCPLYTVGPQHQS*TGLVDV
Trigger: CACATCTACCAACCCTGTGCATGACTGATGTTGGGG...TCCTACAGTGTAAAGAGGACAACCCGGACTTTGAAGGCGTGGATTGTGCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR GCA 90 bp CCACGGACTGTGCTTTTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACAAACTCCAACCATCTaGATTACATCTACTGGCCAT +
Preference number: 2 (lower is better)
Translates to: PRTVLLRVGLQVPPPSLEQTPTI*ITSTGH
Trigger: ATGGCCAGTAGATGTAATGCAGATGGTTGGAGTTTG...TTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAAAAGCACAGTCCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGGGCCTCACTCTGTTaGCCAGGCTGGTTTGAGTAC +
Preference number: 2 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGRASLC*PGWFEY
Trigger: GTACTCAAACCAGCCTGGGCAACAGAGTGAGGCCCT...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATCACTGGAGAGGGATCTaGCTACTTACAACCGAAGGC +
Preference number: 2 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHHWRGI*LLTTEG
Trigger: GCCTTCGGTTGTAAGTAGCCAGATCCCTCTCCAGTG...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CCA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGAACGGAGGCCAAAGTaGGTGAGGGAAGTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHERRPK*VREVAN
Trigger: GTTTGCTACTTCCCTCACCCACTTTGGCCTCCGTTC...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGACGTGGTATGCTCTaGCCCTGGACAGTGGCTAGA +
Preference number: 2 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGRRGML*PWTVAR
Trigger: TCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCT...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp TCGCTGCCACTACCCCACTCTCGAATGACAGACATGATCTTCTGTTaGACTCCAGAGGTCATAGGAACCTTAGTACTTCCAACTCGAATG +
Preference number: 2 (lower is better)
Translates to: SLPLPHSRMTDMIFC*TPEVIGTLVLPTRM
Trigger: CATTCGAGTTGGAAGTACTAAGGTTCCTATGACCTCTGGAGTCAAACAGAAGATCATGTCTGTCATTCGAGAGTGGGGTAGTGGCAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CAA 90 bp AGCCCAGAGATGCACTCCTTGCATTTGGCCCATTCAACCCATTTCTaGTTACACCTCATGATGCTCAAACTGGCAAAATTTACCCCCTGC +
Preference number: 2 (lower is better)
Translates to: SPEMHSLHLAHSTHF*LHLMMLKLAKFTPC
Trigger: GCAGGGGGTAAATTTTGCCAGTTTGAGCATCATGAGGTGTAACAAGAAATGGGTTGAATGGGCCAAATGCAAGGAGTGCATCTCTGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp GCAGCACTCAAGTCAGTTTGCAGCCCAGAGATGCACTCCTTGCATTaGGCCCATTCAACCCATTTCTTGTTACACCTCATGATGCTCAAA +
Preference number: 2 (lower is better)
Translates to: AALKSVCSPEMHSLH*AHSTHFLLHLMMLK
Trigger: TTTGAGCATCATGAGGTGTAACAAGAAATGGGTTGAATGGGCCAAATGCAAGGAGTGCATCTCTGGGCTGCAAACTGACTTGAGTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp CTGCCTTGCCTAGCCCTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAGTAAAGAAACCAAACTTCTCTaGAGAGGCTTTCTGATTAAG +
Preference number: 2 (lower is better)
Translates to: LPCLALERKLLRIILLSKETKLL*RGFLIK
Trigger: CTTAATCAGAAAGCCTCTCCAGAGAAGTTTGGTTTC...TTTACTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 90 bp AGGCCACTAAGTCAAGGAACTGAGTCAGGAAAAGCTGAGTTTTGTTaGCACGGAATAGCAATAGTGCAGCACTCAAGTCAGTTTGCAGCC +
Preference number: 2 (lower is better)
Translates to: RPLSQGTESGKAEFC*HGIAIVQHSSQFAA
Trigger: GGCTGCAAACTGACTTGAGTGCTGCACTATTGCTATTCCGTGCAAACAAAACTCAGCTTTTCCTGACTCAGTTCCTTGACTTAGTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACCCCAACATCAGTCATaGACAGGGTTGGTAGATGTG +
Preference number: 2 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGPQHQS*TGLVDV
Trigger: CACATCTACCAACCCTGTGCATGACTGATGTTGGGG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR GCA 90 bp CCAGTTGCTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACCAGAATTAGCTTTAATCCGCTaGACACTCTTTCTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: PVATTTPIAFPAAMFVPELALIR*TLFLSC
Trigger: ACAGGACAGAAAGAGTGTGCAGCGGATTAAAGCTAA...TTCTGGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR GCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAATTTGCAGCCCAGAGATaGACTCCTTGCATTTGGCCC +
Preference number: 2 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEFAAQR*TPCIWP
Trigger: GGGCCAAATGCAAGGAGTGCATCTCTGGGCTGCAAA...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGTCTGCTCACAGGCACTaGAGACGTGGTATGCTCTGG +
Preference number: 2 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRSAHRH*RRGMLW
Trigger: CCAGAGCATACCACGTCTGCAGTGCCTGTGAGCAGA...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGAAATGTGGCGACTTaGCTGACGGCTTCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGRNVAT*LTASKF
Trigger: GAACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCT...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR TCA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACAAATACTCACGTTAGTTaGTGGATGTTGGAAGGCATT +
Preference number: 2 (lower is better)
Translates to: LSCLMPPNPPQTPTICITNTHVS*WMLEGI
Trigger: AATGCCTTCCAACATCCATCAACTAACGTGAGTATT...TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCACGATTTTAGACTTGTaGGAGGGTTCAACTCGAGCA +
Preference number: 2 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSTILDL*EGSTRA
Trigger: TGCTCGAGTTGAACCCTCCCACAAGTCTAAAATCGT...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAGATCTGGAAGATGAGTaGCAAGGGTTCGACATAGAG +
Preference number: 2 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGDLEDE*QGFDIE
Trigger: CTCTATGTCGAACCCTTGCCACTCATCTTCCAGATC...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR GCA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCTTACAACCGAAGGCATaGATTACAATTGAATACTGT +
Preference number: 2 (lower is better)
Translates to: CLVDTELILWSQVLGLPTLQPKA*ITIEYC
Trigger: ACAGTATTCAATTGTAATGCATGCCTTCGGTTGTAA...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR GCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCCTGAAACCATGTCTGTaGGACGCTCATTGTTACCAG +
Preference number: 2 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETLKPCL*DAHCYQ
Trigger: CTGGTAACAATGAGCGTCGCACAGACATGGTTTCAG...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
3UTR-3UTR GCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTATTGGTCTGGCTGAAATaGCTCTCTCCCCACTCCGGC +
Preference number: 2 (lower is better)
Translates to: ASQYLYCTNICLLLLISLLVWLK*LSPHSG
Trigger: GCCGGAGTGGGGAGAGAGGCATTTCAGCCAGACCAA...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCTTCTTCTCTTCTCAGTaGGTTGTCATGAGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETFFSSQ*VVMSGQ
Trigger: CTGGCCACTCATGACAACCCACTGAGAAGAGAAGAA...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CAA 90 bp CTTCAGGAGCACCCTTCACAAACATCTTGCTCATTGATGTCCTGCTaGGTTTATTTGGTGTACAGTAAACCGACATTGACTTTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: LQEHPSQTSCSLMSC*VYLVYSKPTLTFCH
Trigger: GTGACAGAAAGTCAATGTCGGTTTACTGTACACCAAATAAACCAAGCAGGACATCAATGAGCAAGATGTTTGTGAAGGGTGCTCCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CCA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGAAACCAAACTTCTCTaGAGAGGCTTTCTGATTAAG +
Preference number: 2 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHETKLL*RGFLIK
Trigger: CTTAATCAGAAAGCCTCTCCAGAGAAGTTTGGTTTC...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAATACAGTTATCTCACTTaGTGGCAGTCACCTTTAGGC +
Preference number: 2 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEYSYLT*WQSPLG
Trigger: GCCTAAAGGTGACTGCCACCAAGTGAGATAACTGTA...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR TCA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGTTTCGGACAAGCTGTTaGGGGCGTTACACATTTCTA +
Preference number: 2 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRFRTSC*GRYTFL
Trigger: TAGAAATGTGTAACGCCCTCAACAGCTTGTCCGAAA...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR TCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAGAATACAATTCCTATaGCTACCTACACAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETRIQFL*LPTQQS
Trigger: GCTCTGCTGTGTAGGTAGTCATAGGAATTGTATTCT...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CCA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACATGTTCCAATGTCACTaGAGAGGGATCTGGCTACTT +
Preference number: 2 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHMFQCH*RGIWLL
Trigger: AAGTAGCCAGATCCCTCTCCAGTGACATTGGAACAT...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
3UTR CAA 90 bp CACCCTTCACAAACATCTTGCTCATTGATGTCCTGCTTGGTTTATTaGGTGTACAGTAAACCGACATTGACTTTCTGTCACGTGAAAACT +
Preference number: 2 (lower is better)
Translates to: HPSQTSCSLMSCLVY*VYSKPTLTFCHVKT
Trigger: AGTTTTCACGTGACAGAAAGTCAATGTCGGTTTACTGTACACCAAATAAACCAAGCAGGACATCAATGAGCAAGATGTTTGTGAAGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR GCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAAATCCCATCGGTGCATaGCGAGAACGAGCAGGATTT +
Preference number: 2 (lower is better)
Translates to: ASQYLYCTNICLLLLISLNPIGA*RERAGF
Trigger: AAATCCTGCTCGTTCTCGGCATGCACCGATGGGATT...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CAA 90 bp CCTCATTGTAATCCAAAGCAGAGTCATTACAAAGAGCACAAATTGTaGCTAATTCTACCAGACCATCATACTGGTGACAATTCACTGGTT +
Preference number: 2 (lower is better)
Translates to: PHCNPKQSHYKEHKL*LILPDHHTGDNSLV
Trigger: AACCAGTGAATTGTCACCAGTATGATGGTCTGGTAGAATTAGCAACAATTTGTGCTCTTTGTAATGACTCTGCTTTGGATTACAATGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CAA 90 bp TTGCCTCATTGTAATCCAAAGCAGAGTCATTACAAAGAGCACAAATaGTTGCTAATTCTACCAGACCATCATACTGGTGACAATTCACTG +
Preference number: 2 (lower is better)
Translates to: LPHCNPKQSHYKEHK*LLILPDHHTGDNSL
Trigger: CAGTGAATTGTCACCAGTATGATGGTCTGGTAGAATTAGCAACAATTTGTGCTCTTTGTAATGACTCTGCTTTGGATTACAATGAGGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR TCA 90 bp CAGATTTTACAAAACACACACATACACACACATACACACTTGCCCTTATGTTCTTGTACCAGTCTTGTCTaGGCAGATAACAGAAGTACA +
Preference number: 2 (lower is better)
Translates to: QILQNTHIHTHTHLPLCSCTSLV*ADNRST
Trigger: TGTACTTCTGTTATCTGCTCAGACAAGACTGGTACA...AGAACATAAGGGCAAGTGTGTATGTGTGTGTATGTGTGTGTTTTGTAAAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAGTTTGGACAATTTGGTaGTTACAGTCACAGGGCAAC +
Preference number: 2 (lower is better)
Translates to: ASQYLYCTNICLLLLISLVWTIW*LQSQGN
Trigger: GTTGCCCTGTGACTGTAACCACCAAATTGTCCAAAC...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR TCA 90 bp CAGATTTTACAAAACACACACATACACACACATACACACTTGCCCTTATGTTCTAGACCATCATACTGGTaGCAATTCACTGGTTTATCA +
Preference number: 2 (lower is better)
Translates to: QILQNTHIHTHTHLPLCSRPSYW*QFTGLS
Trigger: TGATAAACCAGTGAATTGTCACCAGTATGATGGTCT...AGAACATAAGGGCAAGTGTGTATGTGTGTGTATGTGTGTGTTTTGTAAAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR TCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAACAAAATCTAGAGTATaGAACCTCCATCACCAGCCA +
Preference number: 2 (lower is better)
Translates to: ASQYLYCTNICLLLLISLTKSRV*NLHHQP
Trigger: TGGCTGGTGATGGAGGTTTCATACTCTAGATTTTGT...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTACCTGCTTGGTTTATTTaGTGTACAGTAAACCGACAT +
Preference number: 2 (lower is better)
Translates to: ASQYLYCTNICLLLLISLPAWFI*CTVNRH
Trigger: ATGTCGGTTTACTGTACACCAAATAAACCAAGCAGG...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR GCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTATTACAACCGAAGGCATaGATTACAATTGAATACTGT +
Preference number: 2 (lower is better)
Translates to: ASQYLYCTNICLLLLISLLQPKA*ITIEYC
Trigger: ACAGTATTCAATTGTAATGCATGCCTTCGGTTGTAA...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR GCA 72 bp CCCGAGTCACATGGCAGGCGCCACAGGCAACCCCGGTaGTCACAGGGCATCAGGGAGCACAGCAGCATCTGC +
Preference number: 3 (lower is better)
Translates to: PESHGRRHRQPR*SQGIREHSSIC
Trigger: GCAGATGCTGCTGTGCTCCCTGATGCCCTGTGAGCACCGGGGTTGCCTGTGGCGCCTGCCATGTGACTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp TTCCTGTCCCTGCCCTGTGGGCACCCGGCTTCTGGCTaGTCGCCTGCCTTGCCTAGCCCTGGAGAGGAAACT +
Preference number: 3 (lower is better)
Translates to: FLSLPCGHPASG*SPALPSPGEET
Trigger: AGTTTCCTCTCCAGGGCTAGGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTGCCCACAGGGCAGGGACAGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 72 bp GGCAAGAGCTGCCTGACAGCAGGCACATTGCGGGGCTaGGCAGCTGCTGCCTCACTGTTAGGTGAGGGCCTG +
Preference number: 3 (lower is better)
Translates to: GKSCLTAGTLRG*AAAASLLGEGL
Trigger: CAGGCCCTCACCTAACAGTGAGGCAGCAGCTGCCCAGCCCCGCAATGTGCCTGCTGTCAGGCAGCTCTTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp TTCCTGTCCCTGCCCTGTGGGCACCCGGCTTCTGGCTGCTCGCCTGCCTTGCCTTTCCACCTCCATCCCTaGAACGTGGGCCCTCTGAAC +
Preference number: 3 (lower is better)
Translates to: FLSLPCGHPASGCSPALPFHLHP*NVGPLN
Trigger: GTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAA...AGGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTGCCCACAGGGCAGGGACAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR TCA 72 bp AGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTaGTGGCTGGGCCTTCAGCCACCTGCCCATCAGGAA +
Preference number: 3 (lower is better)
Translates to: RPREARGGNKRH*WLGLQPPAHQE
Trigger: TTCCTGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp CCTGTGGGCACCCGGCTTCTGGCTGCTCGCCTGCCTTaGCTAGCCCTGGAGAGGAAACTCCTCCGCATCATT +
Preference number: 3 (lower is better)
Translates to: PVGTRLLAARLP*LALERKLLRII
Trigger: AATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTGCCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp GGAGCAGCTGTTGTGAGGGAAGTCGGCCAGATGCCCTaGTTGCCTGGGAGCTCACTGAGCTCAAGGGACAGC +
Preference number: 3 (lower is better)
Translates to: GAAVVREVGQMP*LPGSSLSSRDS
Trigger: GCTGTCCCTTGAGCTCAGTGAGCTCCCAGGCAAGCAGGGCATCTGGCCGACTTCCCTCACAACAGCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp GCCTCACTGTTAGGTGAGGGCCTGAGGCCAGGGATGTaGCAAGACCACGGTGCTGGACCTGGTCTTTATGGG +
Preference number: 3 (lower is better)
Translates to: ASLLGEGLRPGM*QDHGAGPGLYG
Trigger: CCCATAAAGACCAGGTCCAGCACCGTGGTCTTGGCACATCCCTGGCCTCAGGCCCTCACCTAACAGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 72 bp CAAAACAGCAGTGGGCCTAACCCACTCCCAGCTGTCTaGACCAAGGGAAGTGGGTCCCTCCATGGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: QNSSGPNPLPAV*TKGSGSLHGLL
Trigger: GAGGAGCCCATGGAGGGACCCACTTCCCTTGGTCCAGACAGCTGGGAGTGGGTTAGGCCCACTGCTGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 72 bp GGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTaGGCCTTCAGCCACCTGCCCATCAGGAAAGAATGT +
Preference number: 3 (lower is better)
Translates to: GRHGVATSDTDG*AFSHLPIRKEC
Trigger: ACATTCTTTCCTGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp CGGCCTGTGAAAGCTTTTGACGTCACGTCCTCATCCTaGCCGAAGATGCCGATGCGGCGACAGATGGCCACA +
Preference number: 3 (lower is better)
Translates to: RPVKAFDVTSSS*PKMPMRRQMAT
Trigger: TGTGGCCATCTGTCGCCGCATCGGCATCTTCGGGCAGGATGAGGACGTGACGTCAAAAGCTTTCACAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CCA 72 bp TGTTGTGAGGGAAGTCGGCCAGATGCCCTGCTTGCCTaGGAGCTCACTGAGCTCAAGGGACAGCTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: CCEGSRPDALLA*ELTELKGQLPP
Trigger: TGGAGGAAGCTGTCCCTTGAGCTCAGTGAGCTCCCAGGCAAGCAGGGCATCTGGCCGACTTCCCTCACAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCAGAGAAATGTGGCGACTaGGCTGACGGCTTCCAAGTT +
Preference number: 3 (lower is better)
Translates to: TGWQQATLMAGPSATCPSEKCGD*ADGFQV
Trigger: AACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTC...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp CTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTGGAGTAAGCTGGTTTTaGGGCTGTGCAGAGCCACGT +
Preference number: 3 (lower is better)
Translates to: LTGTADVVCSGPGQWLDAGVSWF*GCAEPR
Trigger: ACGTGGCTCTGCACAGCCCAAAAACCAGCTTACTCC...AGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp GAACGTGGGCCCTCTGAACTCAGCAGCACCTTGTCCTaGTTGATGCCTCCTAACCCTCCCCAAACTCCAACC +
Preference number: 3 (lower is better)
Translates to: ERGPSELSSTLS*LMPPNPPQTPT
Trigger: GGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAAGGTGCTGCTGAGTTCAGAGGGCCCACGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp ATTTGGTGGTTACAGTCACAGGGCAACTGCTGGCTCTaGTCACAGGCACTGCAGACGTGGTATGCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: IWWLQSQGNCWL*SQALQTWYALA
Trigger: GGCCAGAGCATACCACGTCTGCAGTGCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGACTGTAACCACCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCACAGTCATGCACAGGGTaGGTAGATGTGTTGCTAAAA +
Preference number: 3 (lower is better)
Translates to: TGWQQATLMAGPSATCPSQSCTG*VDVLLK
Trigger: TTTTAGCAACACATCTACCAACCCTGTGCATGACTG...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp GTCAGCAGCAATGAACCACCATGCAGCAGCACCCACGGTAGCAGCGCCGACGTAACGGGATCAGTGTGCTaGATGACAGAGACAGATTCA +
Preference number: 3 (lower is better)
Translates to: VSSNEPPCSSTHGSSADVTGSVC*MTETDS
Trigger: TGAATCTGTCTCTGTCATCAAGCACACTGATCCCGT...TACGTCGGCGCTGCTACCGTGGGTGCTGCTGCATGGTGGTTCATTGCTGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp CCACGGACTGTGCTTTTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAAAGCACCTTGTCCTGCTaGATGCCTCCTAACCCTCCC +
Preference number: 3 (lower is better)
Translates to: PRTVLLRVGLQVPPPSLESTLSC*MPPNPP
Trigger: GGGAGGGTTAGGAGGCATCAAGCAGGACAAGGTGCT...TTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAAAAGCACAGTCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR TCA 72 bp AAAGAATGTGGAAGTAAGTTTCAGGCAAGAGCTGCCTaGCAGCAGGCACATTGCGGGGCTGGGCAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: KECGSKFQARAA*QQAHCGAGQLL
Trigger: CAGCAGCTGCCCAGCCCCGCAATGTGCCTGCTGTCAGGCAGCTCTTGCCTGAAACTTACTTCCACATTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp GTCAGCAGCAATGAACCACCATGCAGCAGCACCCACGGTAGCAGCGCCGACGTATCTACGATTTTAGACTaGTGGGAGGGTTCAACTCGA +
Preference number: 3 (lower is better)
Translates to: VSSNEPPCSSTHGSSADVSTILD*WEGSTR
Trigger: TCGAGTTGAACCCTCCCACAAGTCTAAAATCGTAGA...TACGTCGGCGCTGCTACCGTGGGTGCTGCTGCATGGTGGTTCATTGCTGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR GCA 72 bp CACCTCATGATGCTCAAACTGGCAAAATTTACCCCCTaGCCCAAATGTTCCCTGCTGGGCAAAGCAGCCTCC +
Preference number: 3 (lower is better)
Translates to: HLMMLKLAKFTP*PKCSLLGKAAS
Trigger: GGAGGCTGCTTTGCCCAGCAGGGAACATTTGGGGCAGGGGGTAAATTTTGCCAGTTTGAGCATCATGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 72 bp AGCAATAGTCTGCACAGCTCCTTCAGCCTGTTGGTCTaGCTGAAATGCCTCTCTCCCCACTCCGGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: SNSLHSSFSLLV*LKCLSPHSGFC
Trigger: ACAAAAGCCGGAGTGGGGAGAGAGGCATTTCAGCCAGACCAACAGGCTGAAGGAGCTGTGCAGACTATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATCGCTGGGCGGAGGGGTaGAGTTCATCAAACTCCCGG +
Preference number: 3 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHRWAEG*SSSNSR
Trigger: CCGGGAGTTTGATGAACTCAACCCCTCCGCCCAGCG...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR TCA 72 bp GAAAACCCCATGAGGCAGACACAATCGTTGCAGCTGTaGAAGCAGCGAGACAGGCAAGAGGACAAGGTCTTG +
Preference number: 3 (lower is better)
Translates to: ENPMRQTQSLQL*KQRDRQEDKVL
Trigger: CAAGACCTTGTCCTCTTGCCTGTCTCGCTGCTTTCACAGCTGCAACGATTGTGTCTGCCTCATGGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp GAGCGCCATTGTCATCGGGTATGGGGATTCAAAGATTaGACAATCCACGCCTTCAAAGTCCGGGTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: ERHCHRVWGFKD*TIHAFKVRVVL
Trigger: GAGGACAACCCGGACTTTGAAGGCGTGGATTGTGCAATCTTTGAATCCCCATACCCGATGACAATGGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR GCA 72 bp AGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATaGTTGGTAGACACTGAGCTAATCTTGTGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: RRGMLWPWTVAR*LVDTELILWSQ
Trigger: CTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 72 bp GTGGCTAGATGCTTGGTAGACACTGAGCTAATCTTGTaGTCTCAGGTCTTAGGTCTGCCCACCTCAGTCAGG +
Preference number: 3 (lower is better)
Translates to: VARCLVDTELIL*SQVLGLPTSVR
Trigger: CCTGACTGAGGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCATCTAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGCCAGAGATGCACTCCTaGCATTTGGCCCATTCAACC +
Preference number: 3 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVPEMHS*HLAHST
Trigger: GGTTGAATGGGCCAAATGCAAGGAGTGCATCTCTGG...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGGACCCGGATGCCTGCTaGCCGGCACAGCTTCACGGA +
Preference number: 3 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRDPDAC*PAQLHG
Trigger: TCCGTGAAGCTGTGCCGGCAAGCAGGCATCCGGGTC...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCTCCCCACTCCGGCTTTaGTCTGGCTTGGGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETSPLRL*SGLGPP
Trigger: AGGAGGGCCCAAGCCAGACAAAAGCCGGAGTGGGGA...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp TTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTaGATTACATCTACTGGCCATCCCAGTAACCAGAGC +
Preference number: 3 (lower is better)
Translates to: LMPPNPPQTPTI*ITSTGHPSNQS
Trigger: GCTCTGGTTACTGGGATGGCCAGTAGATGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp GAGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTaGATTCTGCAGAGTGGTGTCCCAGTTAGGGTATGT +
Preference number: 3 (lower is better)
Translates to: ELKGQLPPEWII*ILQSGVPVRVC
Trigger: ACATACCCTAACTGGGACACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 72 bp GAGGTCATAGGAACCTTAGTACTTCCAACTCGAATGTaGGTGCACCTGTCAATGACACCTTCAGGAGCACCC +
Preference number: 3 (lower is better)
Translates to: EVIGTLVLPTRM*VHLSMTPSGAP
Trigger: GGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCCACATTCGAGTTGGAAGTACTAAGGTTCCTATGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCGGTAGAAGGACACTCTaGGACCACCGTCAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSGRRTL*DHRQQQ
Trigger: TTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTACC...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR GCA 72 bp ATCCCGGATCTTGCCAATTTCGGTGTTAACTCCAGTTaGTACCACCACTCCCATAGCTTTCCCAGCAGCAAT +
Preference number: 3 (lower is better)
Translates to: IPDLANFGVNSS*YHHSHSFPSSN
Trigger: ATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGGAGTTAACACCGAAATTGGCAAGATCCGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp TGGGTGCACCTGTCAATGACACCTTCAGGAGCACCCTTCACAAACATCTTGCTCCAGTCATGCACAGGGTaGGTAGATGTGTTGCTAAAA +
Preference number: 3 (lower is better)
Translates to: WVHLSMTPSGAPFTNILLQSCTG*VDVLLK
Trigger: TTTTAGCAACACATCTACCAACCCTGTGCATGACTG...GAGCAAGATGTTTGTGAAGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGAGAAATGTGGCGACTaGGCTGACGGCTTCCAAGTT +
Preference number: 3 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHEKCGD*ADGFQV
Trigger: AACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTC...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR GCA 72 bp ATAGTGCAGCACTCAAGTCAGTTTGCAGCCCAGAGATaGACTCCTTGCATTTGGCCCATTCAACCCATTTCT +
Preference number: 3 (lower is better)
Translates to: IVQHSSQFAAQR*TPCIWPIQPIS
Trigger: AGAAATGGGTTGAATGGGCCAAATGCAAGGAGTGCATCTCTGGGCTGCAAACTGACTTGAGTGCTGCACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 72 bp AGCCAAGTAACGGAAAAAGAGCCACCCGCTGATCAATaGTTCCTTTGGGTTCCGGGGAGGTTTATTCATGAT +
Preference number: 3 (lower is better)
Translates to: SQVTEKEPPADQ*FLWVPGRFIHD
Trigger: ATCATGAATAAACCTCCCCGGAACCCAAAGGAACCATTGATCAGCGGGTGGCTCTTTTTCCGTTACTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACAATACAGTTATCTCACTaGGTGGCAGTCACCTTTAGG +
Preference number: 3 (lower is better)
Translates to: LSCLMPPNPPQTPTICITIQLSH*VAVTFR
Trigger: CCTAAAGGTGACTGCCACCAAGTGAGATAACTGTAT...TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCGGGTTGGTAGATGTGTaGCTAAAAACGCACATGCAC +
Preference number: 3 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSGLVDV*LKTHMH
Trigger: GTGCATGTGCGTTTTTAGCAACACATCTACCAACCC...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CAA 90 bp TGGGTGCACCTGTCAATGACACCTTCAGGAGCACCCTTCACAAACATCTTGCTCATATCAGCAGGAACTTaGTCACCAACAGCAATTTCT +
Preference number: 3 (lower is better)
Translates to: WVHLSMTPSGAPFTNILLISAGT*SPTAIS
Trigger: AGAAATTGCTGTTGGTGACAAAGTTCCTGCTGATAT...GAGCAAGATGTTTGTGAAGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp CACCCGCTGATCAATGGTTCCTTTGGGTTCCGGGGAGGTTTATTCATGATGTCCTCATATTTAATAAAGTaGGCAGAGTCCTCAAGGTGC +
Preference number: 3 (lower is better)
Translates to: HPLINGSFGFRGGLFMMSSYLIK*AESSRC
Trigger: GCACCTTGAGGACTCTGCCAACTTTATTAAATATGA...GGACATCATGAATAAACCTCCCCGGAACCCAAAGGAACCATTGATCAGCGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCCACTGGTTCAGTTACTaGCTTTCACTAGTTTTTAGC +
Preference number: 3 (lower is better)
Translates to: CLVDTELILWSQVLGLPTHWFSY*LSLVFS
Trigger: GCTAAAAACTAGTGAAAGCAAGTAACTGAACCAGTG...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 72 bp GTACATTTTGAAGAATATAGTCGAGGCCTCACACCCTaGCTAAGGAGTAAGCTGGTTTTTGGGCTGTGCAGA +
Preference number: 3 (lower is better)
Translates to: VHFEEYSRGLTP*LRSKLVFGLCR
Trigger: TCTGCACAGCCCAAAAACCAGCTTACTCCTTAGCCAGGGTGTGAGGCCTCGACTATATTCTTCAAAATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR-3UTR CAA 90 bp AGATTGCACAATCCACGCCTTCAAAGTCCGGGTTGTCCTCTTTACACTGTAGGATCCTGCTTGGTTTATTaGGTGTACAGTAAACCGACA +
Preference number: 3 (lower is better)
Translates to: RLHNPRLQSPGCPLYTVGSCLVY*VYSKPT
Trigger: TGTCGGTTTACTGTACACCAAATAAACCAAGCAGGA...TCCTACAGTGTAAAGAGGACAACCCGGACTTTGAAGGCGTGGATTGTGCAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAAGGGTTGGTAGATGTGTaGCTAAAAACGCACATGCAC +
Preference number: 3 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEGLVDV*LKTHMH
Trigger: GTGCATGTGCGTTTTTAGCAACACATCTACCAACCC...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
3UTR-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAGTTGCCCAGGCTGGTTaGAGTACCTGGGCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: ASQYLYCTNICLLLLISLVAQAG*STWAQA
Trigger: TGCTTGAGCCCAGGTACTCAAACCAGCCTGGGCAAC...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR TCA 72 bp GCATCCAAATCCCAGGAAGAAAATACTCACGTTAGTTaGTGGATGTTGGAAGGCATTGGAGGAAAACACCAC +
Preference number: 3 (lower is better)
Translates to: ASKSQEENTHVS*WMLEGIGGKHH
Trigger: GTGGTGTTTTCCTCCAATGCCTTCCAACATCCATCAACTAACGTGAGTATTTTCTTCCTGGGATTTGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR GCA 72 bp ATATCACCAGGAACTATGTCTTTAGCTTTAATCCGCTaGACACTCTTTCTGTCCTGTCGATACACTTTGCCC +
Preference number: 3 (lower is better)
Translates to: ISPGTMSLALIR*TLFLSCRYTLP
Trigger: GGGCAAAGTGTATCGACAGGACAGAAAGAGTGTGCAGCGGATTAAAGCTAAAGACATAGTTCCTGGTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCTCCTGTCGATACACTTaGCCCATTTCAGGCTCATAT +
Preference number: 3 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTSCRYT*PISGSY
Trigger: ATATGAGCCTGAAATGGGCAAAGTGTATCGACAGGA...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGCCAACGAAGGTCAGATaGGTCTCATATTTAATAAAG +
Preference number: 3 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRPTKVR*VSYLIK
Trigger: CTTTATTAAATATGAGACCAATCTGACCTTCGTTGG...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR TCA 72 bp ACAATTAGTGCCTGTACATTAAGAATACAATTCCTATaGCTACCTACACAGCAGAGCAGGAGCCTTCTTCCC +
Preference number: 3 (lower is better)
Translates to: TISACTLRIQFL*LPTQQSRSLLP
Trigger: GGGAAGAAGGCTCCTGCTCTGCTGTGTAGGTAGTCATAGGAATTGTATTCTTAATGTACAGGCACTAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
3UTR GCA 72 bp GAGCACCCTTCACAAACATCTTGCTCATTGATGTCCTaGTTGGTTTATTTGGTGTACAGTAAACCGACATTG +
Preference number: 3 (lower is better)
Translates to: EHPSQTSCSLMS*LVYLVYSKPTL
Trigger: CAATGTCGGTTTACTGTACACCAAATAAACCAAGCAGGACATCAATGAGCAAGATGTTTGTGAAGGGTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAAAGAGCACAAATTGTaGCTAATTCTACCAGACCAT +
Preference number: 3 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSKEHKL*LILPDH
Trigger: ATGGTCTGGTAGAATTAGCAACAATTTGTGCTCTTT...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR TCA 72 bp CCATCGCCAGTCATAGCTGTAATCTCATCAAAAGACTaGAGAAATTCTACGATTTTAGACTTGTGGGAGGGT +
Preference number: 3 (lower is better)
Translates to: PSPVIAVISSKD*RNSTILDLWEG
Trigger: ACCCTCCCACAAGTCTAAAATCGTAGAATTTCTTCAGTCTTTTGATGAGATTACAGCTATGACTGGCGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CCA 72 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTaGCTGACGGCTTCCAAGTTCTTAGATAAGGTTACA +
Preference number: 3 (lower is better)
Translates to: ISYDILQRNVAT*LTASKFLDKVT
Trigger: TGTAACCTTATCTAAGAACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CAA 90 bp CAGATTTTACAAAACACACACATACACACACATACACACTTGCCCTTATGTTCTTCTGTGCGACGCTCATaGTTACCAGCACAGAAAGAA +
Preference number: 3 (lower is better)
Translates to: QILQNTHIHTHTHLPLCSSVRRS*LPAQKE
Trigger: TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGA...AGAACATAAGGGCAAGTGTGTATGTGTGTGTATGTGTGTGTTTTGTAAAATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CAA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGCAATGGCATTTTTCTTaGCCATTCTGCGAGTTCCAA +
Preference number: 3 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRQWHFS*PFCEFQ
Trigger: TTGGAACTCGCAGAATGGCAAAGAAAAATGCCATTG...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR-3UTR CAA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACATAAGCTATGACATTTaGCAGAGAAATGTGGCGACT +
Preference number: 3 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHISYDI*QRNVAT
Trigger: AGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
3UTR-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAAACTGCAGCGGGTGTTaGGACAATTTGGTGGTTACA +
Preference number: 3 (lower is better)
Translates to: ASQYLYCTNICLLLLISLNCSGC*DNLVVT
Trigger: TGTAACCACCAAATTGTCCAAACACCCGCTGCAGTT...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CCA 72 bp CCTCATTCCTCTTGCAGCAAAGAAACCAAACTTCTCTaGAGAGGCTTTCTGATTAAGCTAAATTGTACATCT +
Preference number: 3 (lower is better)
Translates to: PHSSCSKETKLL*RGFLIKLNCTS
Trigger: AGATGTACAATTTAGCTTAATCAGAAAGCCTCTCCAGAGAAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTACAGTCATGCACAGGGTaGGTAGATGTGTTGCTAAAA +
Preference number: 3 (lower is better)
Translates to: ASQYLYCTNICLLLLISLQSCTG*VDVLLK
Trigger: TTTTAGCAACACATCTACCAACCCTGTGCATGACTG...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAAGAGCCTCATTCCTCTaGCAGCAAAGAAACCAAACT +
Preference number: 3 (lower is better)
Translates to: ASQYLYCTNICLLLLISLRASFL*QQRNQT
Trigger: AGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCT...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR CCA 72 bp CTATTTAAGACGAACCTATCGATACCCAGAGTTCACTaGTTCAGTTACTTGCTTTCACTAGTTTTTAGCTTT +
Preference number: 3 (lower is better)
Translates to: LFKTNLSIPRVH*FSYLLSLVFSF
Trigger: AAAGCTAAAAACTAGTGAAAGCAAGTAACTGAACCAGTGAACTCTGGGTATCGATAGGTTCGTCTTAAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR TCA 72 bp CAAATTGTTGCTAATTCTACCAGACCATCATACTGGTaGCAATTCACTGGTTTATCATCTTTATGCACTTCT +
Preference number: 3 (lower is better)
Translates to: QIVANSTRPSYW*QFTGLSSLCTS
Trigger: AGAAGTGCATAAAGATGATAAACCAGTGAATTGTCACCAGTATGATGGTCTGGTAGAATTAGCAACAATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR GCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGGGTTGAACCCCAGTaGAGTGGCAGGCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFRVEPQ*SGRQAI
Trigger: GATGGCCTGCCTGCCACTGCACTGGGGTTCAACCCT...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCCCTCCTCCACCGTCTTaGTGTGCGCGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFPPPPS*CARSPW
Trigger: CCATGGAGAACGCGCACACCAAGACGGTGGAGGAGG...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp CTGGGCAAAGCTCAGAGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTTGCCTCACTGTTAGGTaGGGGCCTGAGGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LGKAQRGQGRHGVATSDTCLTVR*GPEARD
Trigger: ATCCCTGGCCTCAGGCCCTCACCTAACAGTGAGGCA...AGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCTCTGAGCTTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCTCGTTGACGCCGAAGTaGCCCAGCACCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: VGLQVPPPSLERGPSELSSLTPK*PSTSST
Trigger: GGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAACGA...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCACCATCAGCCACTaGGTCACGTTCAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFSTISH*VTFSGV
Trigger: CACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTTGCGCCCGAGTCACATaGCAGGCGCCACAGGCAACC +
Preference number: 4 (lower is better)
Translates to: LTGTADVVCSGPGQWLDACARVT*QAPQAT
Trigger: GGTTGCCTGTGGCGCCTGCCATGTGACTCGGGCGCA...AGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAAGGGAGGCACGGGGTaGCAACAAGCGACACTGATG +
Preference number: 4 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFKGGTG*QQATLM
Trigger: CATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTT...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CTGGGCAAAGCTCAGAGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTCAGGCACTGCAGACGTaGTATGCTCTGGCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LGKAQRGQGRHGVATSDTQALQT*YALALD
Trigger: GTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTG...AGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCTCTGAGCTTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCAGAAGCACTGGCTCAGTaGCACAGACTCCTCGTGTCG +
Preference number: 4 (lower is better)
Translates to: TGWQQATLMAGPSATCPSEALAQ*HRLLVS
Trigger: CGACACGAGGAGTCTGTGTCACTGAGCCAGTGCTTC...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCGTGGGTTGTCATGAGTaGCCAGGGCCAGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: VGLQVPPPSLERGPSELSVGCHE*PGPGIA
Trigger: TGCGATGCCTGGCCCTGGCCACTCATGACAACCCAC...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCCTCTGTTGCCCAGGCTaGTTTGAGTACCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFLCCPG*FEYLGS
Trigger: TGAGCCCAGGTACTCAAACCAGCCTGGGCAACAGAG...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp CTGGGCAAAGCTCAGAGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTAGGAAATCCCATCGGTaGATGCCGAGAACGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGKAQRGQGRHGVATSDTRKSHR*MPRTSR
Trigger: CCTGCTCGTTCTCGGCATGCACCGATGGGATTTCCT...AGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCTCTGAGCTTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCAGTGCCAAGACCACGGTaGTGGACCTGGTCTTTATGG +
Preference number: 4 (lower is better)
Translates to: TGWQQATLMAGPSATCPSVPRPR*WTWSLW
Trigger: CCATAAAGACCAGGTCCAGCACCGTGGTCTTGGCAC...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCACTGCAGACGTGGTATaGTCTGGCCCTGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: VGLQVPPPSLERGPSELSTADVV*SGPGQW
Trigger: CCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGT...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCTGGCTTGGGCCCTCCTaGTCATCTTGTCCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: VGLQVPPPSLERGPSELSWLGPS*SSCPRQ
Trigger: CTGCCTAGGACAAGATGACCAGGAGGGCCCAAGCCA...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp GAAATGCCTCTCTCCCCACTCCGGCTTTTGTCTGGCTaGGGCCCTCCTGGTCATCTTGTCCTAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EMPLSPLRLLSG*GPPGHLVLGSL
Trigger: CAGGCTGCCTAGGACAAGATGACCAGGAGGGCCCAAGCCAGACAAAAGCCGGAGTGGGGAGAGAGGCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp TTCCTGTCCCTGCCCTGTGGGCACCCGGCTTCTGGCTGCTCGCCTGCCTTGCCTCAAAACAATACTGACTaGGGTAGCAAGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FLSLPCGHPASGCSPALPQNNTD*GSKTLL
Trigger: GAGCAGAGTCTTGCTACCTCAGTCAGTATTGTTTTG...AGGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTGCCCACAGGGCAGGGACAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp AGCACCATCAGCCACTGGGTCACGTTCAGCGGTGTGATCTGGAAGATGAGTGGCAGGGTTGAACCCCAGTaGAGTGGCAGGCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: STISHWVTFSGVIWKMSGRVEPQ*SGRQAI
Trigger: GATGGCCTGCCTGCCACTGCACTGGGGTTCAACCCT...GCCACTCATCTTCCAGATCACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCCCACGGTGCTGGACCTaGTCTTTATGGGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: VGLQVPPPSLERGPSELSPRCWT*SLWVDL
Trigger: CAGGTCAACCCATAAAGACCAGGTCCAGCACCGTGG...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp TTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAATGCCTGGGAGCTCACTaGGCTCAAGGGACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LRVGLQVPPPSLERGPSECLGAH*AQGTAS
Trigger: GGAAGCTGTCCCTTGAGCTCAGTGAGCTCCCAGGCA...TTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGTGGACGCCGCTCATTaGCCGAGAGCGCCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSVDAAH*PRAPSA
Trigger: CGCGCTGGGCGCTCTCGGCCAATGAGCGGCGTCCAC...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS-3UTR CCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACATGTGCGCGTTCTCCATaGCTTCGGGGGCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTCARSP*LRGPGR
Trigger: CCGGCCGGGCCCCCGAAGCCATGGAGAACGCGCACA...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TTCCTGTCCCTGCCCTGTGGGCACCCGGCTTCTGGCTGCTCGCCTGCCTTGCCTCTGCAGACTGACATCTaGTTTGTTGTAAGTGTACCA +
Preference number: 4 (lower is better)
Translates to: FLSLPCGHPASGCSPALPLQTDI*FVVSVP
Trigger: TGGTACACTTACAACAAACCAGATGTCAGTCTGCAG...AGGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTGCCCACAGGGCAGGGACAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCAGTGAAATGGAGCAAGTaGCCCTGCTCAAAACAGCAG +
Preference number: 4 (lower is better)
Translates to: TGWQQATLMAGPSATCPSVKWSK*PCSKQQ
Trigger: CTGCTGTTTTGAGCAGGGCCACTTGCTCCATTTCAC...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCAAAGCCTTCAGTGAAATaGAGCAAGTGGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TGWQQATLMAGPSATCPSKPSVK*SKWPCS
Trigger: TGAGCAGGGCCACTTGCTCCATTTCACTGAAGGCTT...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CTGGGCAAAGCTCAGAGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTAAGAGGACAAGGTCTTaGTTAGTGGTGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGKAQRGQGRHGVATSDTKRTRS*LVVQRV
Trigger: CACCCTCTGCACCACTAACCAAGACCTTGTCCTCTT...AGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCTCTGAGCTTTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp GGTCTGGCTGAAATGCCTCTCTCCCCACTCCGGCTTTaGTCTGGCTTGGGCCCTCCTGGTCATCTTGTCCTA +
Preference number: 4 (lower is better)
Translates to: GLAEMPLSPLRL*SGLGPPGHLVL
Trigger: TAGGACAAGATGACCAGGAGGGCCCAAGCCAGACAAAAGCCGGAGTGGGGAGAGAGGCATTTCAGCCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp CGTGGGCCCTCTGAACTCAGCAGCACCTTGTCCTGCTaGATGCCTCCTAACCCTCCCCAAACTCCAACCATC +
Preference number: 4 (lower is better)
Translates to: RGPSELSSTLSC*MPPNPPQTPTI
Trigger: GATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAAGGTGCTGCTGAGTTCAGAGGGCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACCCCTCCCCGCTCTCTTaGGGCGATCAGAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYPSPLS*GDQRPR
Trigger: GCGGGGCCTCTGATCGCCTCAAGAGAGCGGGGAGGG...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGGCTGGGCGGAGGGGTTaGGTTCATCAAACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVAGRRG*VHQTPG
Trigger: GCCGGGAGTTTGATGAACTCAACCCCTCCGCCCAGC...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp TTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAAGCCTGTGGAGGTCTATaGAAGCCACACCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LRVGLQVPPPSLERGPSEACGGL*KPHLQP
Trigger: TGGCTGGAGGTGTGGCTTTCATAGACCTCCACAGGC...TTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCATGCTTGGTAGACACTaGGCTAATCTTGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFMLGRH*ANLVVS
Trigger: TGAGACCACAAGATTAGCTCAGTGTCTACCAAGCAT...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp GTCAGCAGCAATGAACCACCATGCAGCAGCACCCACGGTAGCAGCGCCGACGTAGGTGTTAACTCCAGTTaGTACCACCACTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: VSSNEPPCSSTHGSSADVGVNSS*YHHSHS
Trigger: GCTATGGGAGTGGTGGTAGCAACTGGAGTTAACACC...TACGTCGGCGCTGCTACCGTGGGTGCTGCTGCATGGTGGTTCATTGCTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATCTCCGCAGGGCGGGTTaGGGGCTCCTGACCCACCCT +
Preference number: 4 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHLRRAG*GLLTHP
Trigger: AGGGTGGGTCAGGAGCCCCCAACCCGCCCTGCGGAG...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGTGTGCGCGTTCTCCATaGCTTCGGGGGCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKCARSP*LRGPGR
Trigger: CCGGCCGGGCCCCCGAAGCCATGGAGAACGCGCACA...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGAGGCAGGCGTCTCGCTaGGCGGAGGGGTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVRQASR*AEGLSS
Trigger: TGAACTCAACCCCTCCGCCCAGCGAGACGCCTGCCT...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGCCCTCCCCGCTCTCTTaGGGCGATCAGAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRPSPLS*GDQRPR
Trigger: GCGGGGCCTCTGATCGCCTCAAGAGAGCGGGGAGGG...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCCTCAGTGGGTTGTCATaGGTGGCCAGGGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: CLVDTELILWSQVLGLPTLSGLS*VARARH
Trigger: ATGCCTGGCCCTGGCCACTCATGACAACCCACTGAG...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AGCACCATCAGCCACTGGGTCACGTTCAGCGGTGTGATCTGGAAGATGAGTGGCTTGACCCAGAGCAGCTaGACAGGAATCAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: STISHWVTFSGVIWKMSGLTQSS*TGIKAS
Trigger: CGAGGCTTTGATTCCTGTTCAGCTGCTCTGGGTCAA...GCCACTCATCTTCCAGATCACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp CTGCCTTGCCTAGCCCTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAGTAAATCACCAGGGGCATTATaGGCAGCACAAACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPCLALERKLLRIILLSKSPGAL*AAQTAR
Trigger: CCTGGCCGTTTGTGCTGCTCATAATGCCCCTGGTGA...TTTACTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGGTCACGTCCTCATCCTaGCCGAAGATGCCGATGCGG +
Preference number: 4 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVVTSSS*PKMPMR
Trigger: CCGCATCGGCATCTTCGGGCAGGATGAGGACGTGAC...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp CAAGGTTTCAAGACCAGCATTTCTGATTTACTGTCCCTGAGGTGCCGCCCACACGCTGCTCGCCTGCCTTaGCTAGCCCTGGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QGFKTSISDLLSLRCRPHAARLP*LALERK
Trigger: TTTCCTCTCCAGGGCTAGGCAAGGCAGGCGAGCAGC...GTGTGGGCGGCACCTCAGGGACAGTAAATCAGAAATGCTGGTCTTGAAACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CCAGTTGCTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACCAGAATCGTTGACGCCGAAGTaGCCCAGCACCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PVATTTPIAFPAAMFVPESLTPK*PSTSST
Trigger: GGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAACGA...TTCTGGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAACTGGAGAGAAAGTTaGACATGTCTGTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFNWRES*TCLLVP
Trigger: TGGGACTAACAGACATGTCCAACTTTCTCTCCAGTT...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCCCCTCCCCGCTCTCTTaGGGCGATCAGAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETPSPLS*GDQRPR
Trigger: GCGGGGCCTCTGATCGCCTCAAGAGAGCGGGGAGGG...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAAGCCTGTGAAAGCTTTTaGCGTCACGTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LRVGLQVPPPSLERGPSEACESF*RHVLIL
Trigger: CAGGATGAGGACGTGACGTCAAAAGCTTTCACAGGC...TTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AGCACCATCAGCCACTGGGTCACGTTCAGCGGTGTGATCTGGAAGATGAGTGGCGGGGAGGTTTATTCATaGTGTCCAGATCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: STISHWVTFSGVIWKMSGGEVYS*CPDQEG
Trigger: ACCCTCCTGATCTGGACATCATGAATAAACCTCCCC...GCCACTCATCTTCCAGATCACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCACACCTCCAGCCAGCTaGTGCTGCGCCCGAGTCACA +
Preference number: 4 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSTPPAS*CCARVT
Trigger: TGTGACTCGGGCGCAGCATCAGCTGGCTGGAGGTGT...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCCAGTTAGGGTATGTATaGTTGTTGGTCTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VGLQVPPPSLERGPSELSQLGYV*LLVFWA
Trigger: TGCCCAGAAGACCAACAATCATACATACCCTAACTG...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp CCACGGACTGTGCTTTTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACATGTTGTTGTAGATTaGCCGCCCCTCCTCAACGGC +
Preference number: 4 (lower is better)
Translates to: PRTVLLRVGLQVPPPSLEHVVVD*PPLLNG
Trigger: GCCGTTGAGGAGGGGCGGGCAATCTACAACAACATG...TTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAAAAGCACAGTCCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCCACCCGGCTTCTGGCTaGTCGCCTGCCTTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSHPASG*SPALPS
Trigger: GCTAGGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTG...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CCAGTTGCTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACCAGAACCTCCTCCACCGTCTTaGTGTGCGCGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: PVATTTPIAFPAAMFVPEPPPPS*CARSPW
Trigger: CCATGGAGAACGCGCACACCAAGACGGTGGAGGAGG...TTCTGGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCAGATGTTGGAAGGCATTaGAGGAAAACACCACAGTTA +
Preference number: 4 (lower is better)
Translates to: TGWQQATLMAGPSATCPSDVGRH*RKTPQL
Trigger: TAACTGTGGTGTTTTCCTCCAATGCCTTCCAACATC...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CAAGGTTTCAAGACCAGCATTTCTGATTTACTGTCCCTGAGGTGCCGCCCACACGATGCCCTGCTTGCCTaGGAGCTCACTGAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QGFKTSISDLLSLRCRPHDALLA*ELTELK
Trigger: CTTGAGCTCAGTGAGCTCCCAGGCAAGCAGGGCATC...GTGTGGGCGGCACCTCAGGGACAGTAAATCAGAAATGCTGGTCTTGAAACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTACTGCAGCGGGTGTTTaGACAATTTGGTGGTTACAG +
Preference number: 4 (lower is better)
Translates to: LTGTADVVCSGPGQWLDATAAGV*TIWWLQ
Trigger: CTGTAACCACCAAATTGTCCAAACACCCGCTGCAGT...AGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp CATTTTAGCAATAGTCTGCACAGCTCCTTCAGCCTGTaGGTCTGGCTGAAATGCCTCTCTCCCCACTCCGGC +
Preference number: 4 (lower is better)
Translates to: HFSNSLHSSFSL*VWLKCLSPHSG
Trigger: GCCGGAGTGGGGAGAGAGGCATTTCAGCCAGACCAACAGGCTGAAGGAGCTGTGCAGACTATTGCTAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp CGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTaGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: RGMLWPWTVARC*VDTELILWSQV
Trigger: GACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGCCCCGTACTCTCGTTaGCGCCGAAGTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMAPYSR*RRSGPA
Trigger: TGCTGGGCCACTTCGGCGTCAACGAGAGTACGGGGC...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGGCTGGGCGGAGGGGTTaGGTTCATCAAACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKAGRRG*VHQTPG
Trigger: GCCGGGAGTTTGATGAACTCAACCCCTCCGCCCAGC...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGGCAAGAGCTGCCTaGCAGCAGGCACATTGCGGG +
Preference number: 4 (lower is better)
Translates to: HATEHPYISAKWFRKRLLQARAA*QQAHCG
Trigger: CCCGCAATGTGCCTGCTGTCAGGCAGCTCTTGCCTG...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCACCTCAGTCAGGGCTaGAGCTCCAGTCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HATEHPYISAKWFRKRLLHLSQG*SSSPRG
Trigger: TCCCCTCGGACTGGAGCTTCAGCCCTGACTGAGGTG...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCCCTGTCGATACACTTTaGCCATTTCAGGCTCATATT +
Preference number: 4 (lower is better)
Translates to: VGLQVPPPSLERGPSELSPVDTL*PFQAHI
Trigger: AATATGAGCCTGAAATGGGCAAAGTGTATCGACAGG...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTGCCCGAAGATGCCGATaGGGCGACAGATGGCCACAG +
Preference number: 4 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGARRCR*GDRWPQ
Trigger: CTGTGGCCATCTGTCGCCGCATCGGCATCTTCGGGC...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp GCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGGCCCGAAGATGCCGATaGGGCGACAGATGGCCACAG +
Preference number: 4 (lower is better)
Translates to: ATEHPYISAKWFRKRLLQARRCR*GDRWPQ
Trigger: CTGTGGCCATCTGTCGCCGCATCGGCATCTTCGGGC...CTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCCATCCTGCCCGAAGATaGCGATGCGGCGACAGATGG +
Preference number: 4 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSHPARR*RCGDRW
Trigger: CCATCTGTCGCCGCATCGGCATCTTCGGGCAGGATG...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACATCCTGCCCGAAGATaGCGATGCGGCGACAGATGG +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTHPARR*RCGDRW
Trigger: CCATCTGTCGCCGCATCGGCATCTTCGGGCAGGATG...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACAGTCACGTCCTCATCCTaGCCGAAGATGCCGATGCGG +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTVTSSS*PKMPMR
Trigger: CCGCATCGGCATCTTCGGGCAGGATGAGGACGTGAC...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp CAAGGTTTCAAGACCAGCATTTCTGATTTACTGTCCCTGAGGTGCCGCCCACACAGCAATGAACCACCATaGAGCAGCACCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: QGFKTSISDLLSLRCRPHSNEPP*SSTHGS
Trigger: GCTACCGTGGGTGCTGCTGCATGGTGGTTCATTGCT...GTGTGGGCGGCACCTCAGGGACAGTAAATCAGAAATGCTGGTCTTGAAACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACGGGAAGTCGGCCAGATaGCCTGCTTGCCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYGKSAR*PACLGA
Trigger: AGCTCCCAGGCAAGCAGGGCATCTGGCCGACTTCCC...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTCGAAGGAAAAGGAGGTaGCGTCGGGGACGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISRRKRR*RRGRLR
Trigger: GCGGAGCCGTCCCCGACGCCACCTCCTTTTCCTTCG...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CCA 90 bp GCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGAGGCAGGCGTCTCGCTaGGCGGAGGGGTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: ATEHPYISAKWFRKRLLQRQASR*AEGLSS
Trigger: TGAACTCAACCCCTCCGCCCAGCGAGACGCCTGCCT...CTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp CCAGTTGCTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACCAGAAAGCACCATCAGCCACTaGGTCACGTTCAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: PVATTTPIAFPAAMFVPESTISH*VTFSGV
Trigger: CACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT...TTCTGGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp CTGCCTTGCCTAGCCCTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAGTAAAGAACGGAGGCCAAAGTaGGTGAGGGAAGTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LPCLALERKLLRIILLSKERRPK*VREVAN
Trigger: GTTTGCTACTTCCCTCACCCACTTTGGCCTCCGTTC...TTTACTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGCGAGGCCTCACACCCTaGCTAAGGAGTAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVRGLTP*LRSKLV
Trigger: AACCAGCTTACTCCTTAGCCAGGGTGTGAGGCCTCG...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp ACCCTTCTTGCTAACTGCAGCGGGTGTTTGGACAATTaGGTGGTTACAGTCACAGGGCAACTGCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TLLANCSGCLDN*VVTVTGQLLAL
Trigger: CAGAGCCAGCAGTTGCCCTGTGACTGTAACCACCAAATTGTCCAAACACCCGCTGCAGTTAGCAAGAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp CAAGAGGACAAGGTCTTGGTTAGTGGTGCAGAGGGTGAGGTTGATGGAGAAGTGTTGACCCAGAGCAGCTaGACAGGAATCAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: QEDKVLVSGAEGEVDGEVLTQSS*TGIKAS
Trigger: CGAGGCTTTGATTCCTGTTCAGCTGCTCTGGGTCAA...CACTTCTCCATCAACCTCACCCTCTGCACCACTAACCAAGACCTTGTCCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGAGGTTGATGGAGAAGTaGGCAGCCAGTAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVRLMEK*AASSST
Trigger: TGTGCTGCTACTGGCTGCTCACTTCTCCATCAACCT...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCTGATTTACTGTCCCTaGGGTGCCGCCCACACAGGG +
Preference number: 4 (lower is better)
Translates to: HATEHPYISAKWFRKRLLLIYCP*GAAHTG
Trigger: CCCTGTGTGGGCGGCACCTCAGGGACAGTAAATCAG...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCGCATTTATCGGCCGCTaGCTCCCCTTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETAFIGR*LPFRRR
Trigger: GCGGCGGCGAAAGGGGAGGCAGCGGCCGATAAATGC...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS-3UTR GCA 90 bp CTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTTTAGCTTTAATCCGCTaGACACTCTTTCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LTGTADVVCSGPGQWLDALALIR*TLFLSC
Trigger: ACAGGACAGAAAGAGTGTGCAGCGGATTAAAGCTAA...AGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp GCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTCGGAGGATCCAGCATaGCCACGCAGCCAACGAAGG +
Preference number: 4 (lower is better)
Translates to: ATEHPYISAKWFRKRLLQSEDPA*PRSQRR
Trigger: CCTTCGTTGGCTGCGTGGGCATGCTGGATCCTCCGA...CTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTACCCGGATGCCTGCTTaGCGGCACAGCTTCACGGAG +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISTRMPA*RHSFTE
Trigger: CTCCGTGAAGCTGTGCCGGCAAGCAGGCATCCGGGT...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACCCGGATGCCTGCTTaGCGGCACAGCTTCACGGAG +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRTRMPA*RHSFTE
Trigger: CTCCGTGAAGCTGTGCCGGCAAGCAGGCATCCGGGT...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCGATGACCCGGATGCCTaGTTGCCGGCACAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: HATEHPYISAKWFRKRLLDDPDA*LPAQLH
Trigger: GTGAAGCTGTGCCGGCAAGCAGGCATCCGGGTCATC...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACACAGGCAACCCCGGTaGTCACAGGGCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLHRQPR*SQGIRE
Trigger: CTCCCTGATGCCCTGTGAGCACCGGGGTTGCCTGTG...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACGCCCCAAATGTTCCCTaGTGGGCAAAGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYAPNVP*WAKQPP
Trigger: GGGAGGCTGCTTTGCCCAGCAGGGAACATTTGGGGC...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAACGAAGGAAAAGGAGGTaGCGTCGGGGACGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: YLPETMSVRRSLLPAQKERRKRR*RRGRLR
Trigger: GCGGAGCCGTCCCCGACGCCACCTCCTTTTCCTTCG...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CCA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTCGATGCGGCGACAGATaGCCACAGCAGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGRCGDR*PQQCPC
Trigger: ACAAGGGCACTGCTGTGGCCATCTGTCGCCGCATCG...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp GCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGCGATGCGGCGACAGATaGCCACAGCAGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ATEHPYISAKWFRKRLLQRCGDR*PQQCPC
Trigger: ACAAGGGCACTGCTGTGGCCATCTGTCGCCGCATCG...CTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCCCACCCGCTGATCAATaGTTCCTTTGGGTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSPPADQ*FLWVPG
Trigger: CCCCGGAACCCAAAGGAACCATTGATCAGCGGGTGG...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp CCACGGACTGTGCTTTTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAAGTAGAAGGACACTCTTaGACCACCGTCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PRTVLLRVGLQVPPPSLEVEGHS*TTVSSN
Trigger: ATTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTAC...TTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAAAAGCACAGTCCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCCACTGGAGAGGGATCTaGCTACTTACAACCGAAGGC +
Preference number: 4 (lower is better)
Translates to: CLVDTELILWSQVLGLPTHWRGI*LLTTEG
Trigger: GCCTTCGGTTGTAAGTAGCCAGATCCCTCTCCAGTG...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCCACTCCCAGCTGTCTaGACCAAGGGAAGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKPLPAV*TKGSGS
Trigger: GGACCCACTTCCCTTGGTCCAGACAGCTGGGAGTGG...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTCTCAGTGGGTTGTCATaGGTGGCCAGGGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISLSGLS*VARARH
Trigger: ATGCCTGGCCCTGGCCACTCATGACAACCCACTGAG...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCTCACCAGGGGCATTATaGGCAGCACAAACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSSPGAL*AAQTAR
Trigger: CCTGGCCGTTTGTGCTGCTCATAATGCCCCTGGTGA...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp CAAGGTTTCAAGACCAGCATTTCTGATTTACTGTCCCTGAGGTGCCGCCCACACCTGAGGAGGAGATGCTaGAGTGTTTTCACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: QGFKTSISDLLSLRCRPHLRRRC*SVFTQQ
Trigger: TTGCTGGGTGAAAACACTTCAGCATCTCCTCCTCAG...GTGTGGGCGGCACCTCAGGGACAGTAAATCAGAAATGCTGGTCTTGAAACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTCCACCGTCTTGGTGTaGGCGTTCTCCATGGCTTCG +
Preference number: 4 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGSTVLV*AFSMAS
Trigger: CGAAGCCATGGAGAACGCGCACACCAAGACGGTGGA...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGGGTGTTAACTCCAGTTaGTACCACCACTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVGVNSS*YHHSHS
Trigger: GCTATGGGAGTGGTGGTAGCAACTGGAGTTAACACC...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAAACCCGGATGCCTGCTTaGCGGCACAGCTTCACGGAG +
Preference number: 4 (lower is better)
Translates to: YLPETMSVRRSLLPAQKETRMPA*RHSFTE
Trigger: CTCCGTGAAGCTGTGCCGGCAAGCAGGCATCCGGGT...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR GCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCGCCCGAAGATGCCGATaGGGCGACAGATGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTARRCR*GDRWPQ
Trigger: CTGTGGCCATCTGTCGCCGCATCGGCATCTTCGGGC...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGCATCCTGCCCGAAGATaGCGATGCGGCGACAGATGG +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMHPARR*RCGDRW
Trigger: CCATCTGTCGCCGCATCGGCATCTTCGGGCAGGATG...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACATTTGCAGCCCAGAGATaGACTCCTTGCATTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSCLMPPNPPQTPTICITFAAQR*TPCIWP
Trigger: GGGCCAAATGCAAGGAGTGCATCTCTGGGCTGCAAA...TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTAGGCAACTGCTGGCTCTaGTCACAGGCACTGCAGACG +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLGNCWL*SQALQT
Trigger: CGTCTGCAGTGCCTGTGAGCAGAGCCAGCAGTTGCC...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGCCTCCTCCACCGTCTTaGTGTGCGCGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRPPPPS*CARSPW
Trigger: CCATGGAGAACGCGCACACCAAGACGGTGGAGGAGG...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGTGGGTTGTCATGAGTaGCCAGGGCCAGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISVGCHE*PGPGIA
Trigger: TGCGATGCCTGGCCCTGGCCACTCATGACAACCCAC...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGGTGGGTTGTCATGAGTaGCCAGGGCCAGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRVGCHE*PGPGIA
Trigger: TGCGATGCCTGGCCCTGGCCACTCATGACAACCCAC...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACGATGCGGCGACAGATaGCCACAGCAGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGRCGDR*PQQCPC
Trigger: ACAAGGGCACTGCTGTGGCCATCTGTCGCCGCATCG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGAGCACCATCAGCCACTaGGTCACGTTCAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKSTISH*VTFSGV
Trigger: CACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
ENST00000553144.1
CDS-3UTR CCA 90 bp CCAGTTGCTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACCAGAACACTGGAGAGGGATCTaGCTACTTACAACCGAAGGC +
Preference number: 4 (lower is better)
Translates to: PVATTTPIAFPAAMFVPEHWRGI*LLTTEG
Trigger: GCCTTCGGTTGTAAGTAGCCAGATCCCTCTCCAGTG...TTCTGGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp CTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTTTAGTTGATGGATGTTaGAAGGCATTGGAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LTGTADVVCSGPGQWLDALVDGC*KALEEN
Trigger: GTTTTCCTCCAATGCCTTCCAACATCCATCAACTAA...AGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCGCCTGCGAGCAGCCTTaGAGGCTTCACAGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: HATEHPYISAKWFRKRLLACEQP*RLHSKA
Trigger: AGCCTTACTGTGAAGCCTCCAAGGCTGCTCGCAGGC...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAGGCTCCTCTGTGGGCTaGAGGGGTCTGAAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGGSSVG*RGLKLR
Trigger: TCTCAGCTTCAGACCCCTCCAGCCCACAGAGGAGCC...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGGCACATTGCGGGGCTaGGCAGCTGCTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKGTLRG*AAAASL
Trigger: CAGTGAGGCAGCAGCTGCCCAGCCCCGCAATGTGCC...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTGGGCACCCGGCTTCTaGCTGCTCGCCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLWAPGF*LLACLA
Trigger: GGCAAGGCAGGCGAGCAGCCAGAAGCCGGGTGCCCA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp CCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTaGCTAAAAACGCACATGCACGCAACCGAACACCCT +
Preference number: 4 (lower is better)
Translates to: PQHQSCTGLVDV*LKTHMHATEHP
Trigger: AGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
3UTR CAA 72 bp AGAGCGCCATTGTCATCGGGTATGGGGATTCAAAGATaGCACAATCCACGCCTTCAAAGTCCGGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RAPLSSGMGIQR*HNPRLQSPGCP
Trigger: AGGACAACCCGGACTTTGAAGGCGTGGATTGTGCAATCTTTGAATCCCCATACCCGATGACAATGGCGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
3UTR CAA 72 bp ACAGTGGCTAGATGCTTGGTAGACACTGAGCTAATCTaGTGGTCTCAGGTCTTAGGTCTGCCCACCTCAGTC +
Preference number: 4 (lower is better)
Translates to: TVARCLVDTELI*WSQVLGLPTSV
Trigger: GACTGAGGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCATCTAGCCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp GTGAAGCCTACCCTTCTTGCTAACTGCAGCGGGTGTTaGGACAATTTGGTGGTTACAGTCACAGGGCAACTG +
Preference number: 4 (lower is better)
Translates to: VKPTLLANCSGC*DNLVVTVTGQL
Trigger: CAGTTGCCCTGTGACTGTAACCACCAAATTGTCCAAACACCCGCTGCAGTTAGCAAGAAGGGTAGGCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp CTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTAATAGGTGCATAAGTTaGTCCAGTTATGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: LTGTADVVCSGPGQWLDANRCIS*SSYGKL
Trigger: GAGTTTACCATAACTGGATCAACTTATGCACCTATT...AGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTAGGGTGCACCTGTCAATaGCACCTTCAGGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLGCTCQ*HLQEHP
Trigger: AGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCC...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCCTCAGTGGGTTGTCATaGGTGGCCAGGGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTLSGLS*VARARH
Trigger: ATGCCTGGCCCTGGCCACTCATGACAACCCACTGAG...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACAAACTCCCGGCCTGTaGAAGCTTTTGACGTCACGT +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTQTPGL*KLLTSR
Trigger: ACGTGACGTCAAAAGCTTTCACAGGCCGGGAGTTTG...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp AGCACCATCAGCCACTGGGTCACGTTCAGCGGTGTGATCTGGAAGATGAGTGGCGTACAACTAAAGTTCTaGGCTAAGAACTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: STISHWVTFSGVIWKMSGVQLKF*AKNWRE
Trigger: TTCTCTCCAGTTCTTAGCTCAGAACTTTAGTTGTAC...GCCACTCATCTTCCAGATCACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp CTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTAATGTACATCACAGATaGCAATTAGTGCCTGTACAT +
Preference number: 4 (lower is better)
Translates to: LTGTADVVCSGPGQWLDANVHHR*QLVPVH
Trigger: ATGTACAGGCACTAATTGTCATCTGTGATGTACATT...AGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp ACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTATGCACCTTGTCCTGCTTaGTGCCTCCTAACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TEHPYISAKWFRKRLLQYAPCPA*CLLTLP
Trigger: GGGGAGGGTTAGGAGGCATCAAGCAGGACAAGGTGC...ATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTTCCACCGTCTTGGTGTaGGCGTTCTCCATGGCTTCG +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISSTVLV*AFSMAS
Trigger: CGAAGCCATGGAGAACGCGCACACCAAGACGGTGGA...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAACCTTCAGGAATGGCTaGTACAGCCAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGTFRNG*YSQGHC
Trigger: GCAGTGGCCCTGGCTGTAGCAGCCATTCCTGAAGGT...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp GCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGATCGCAGTGTGTCGCTaGCACTACCCCACTCTCGAA +
Preference number: 4 (lower is better)
Translates to: ATEHPYISAKWFRKRLLQIAVCR*HYPTLE
Trigger: TTCGAGAGTGGGGTAGTGGCAGCGACACACTGCGAT...CTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAATCGGAGGATCCAGCATaGCCACGCAGCCAACGAAGG +
Preference number: 4 (lower is better)
Translates to: YLPETMSVRRSLLPAQKESEDPA*PRSQRR
Trigger: CCTTCGTTGGCTGCGTGGGCATGCTGGATCCTCCGA...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR GCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCTCGGAGGATCCAGCATaGCCACGCAGCCAACGAAGG +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTSEDPA*PRSQRR
Trigger: CCTTCGTTGGCTGCGTGGGCATGCTGGATCCTCCGA...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAAGATGACCCGGATGCCTaGTTGCCGGCACAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEDDPDA*LPAQLH
Trigger: GTGAAGCTGTGCCGGCAAGCAGGCATCCGGGTCATC...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR GCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCGTCACGTCCTCATCCTaGCCGAAGATGCCGATGCGG +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTVTSSS*PKMPMR
Trigger: CCGCATCGGCATCTTCGGGCAGGATGAGGACGTGAC...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCAGGGTTGAACCCCAGTaGAGTGGCAGGCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTRVEPQ*SGRQAI
Trigger: GATGGCCTGCCTGCCACTGCACTGGGGTTCAACCCT...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACAAGCAGCACCTTGTCCTaGTTGATGCCTCCTAACCCT +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTSSTLS*LMPPNP
Trigger: AGGGTTAGGAGGCATCAAGCAGGACAAGGTGCTGCT...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTTGGAGCAAGTGGCCCTaGTCAAAACAGCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISWSKWP*SKQQWA
Trigger: GGCCCACTGCTGTTTTGAGCAGGGCCACTTGCTCCA...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGTCTGCTCACAGGCACTaGAGACGTGGTATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ISYDILQRNVATWLTASKSAHRH*RRGMLW
Trigger: CCAGAGCATACCACGTCTGCAGTGCCTGTGAGCAGA...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTACGCCGCCGCGGCATGTaGACGCCGCTCATTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLRRRGM*TPLIGR
Trigger: TCGGCCAATGAGCGGCGTCCACATGCCGCGGCGGCG...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS-3UTR CCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTATGTGCGCGTTCTCCATaGCTTCGGGGGCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLCARSP*LRGPGR
Trigger: CCGGCCGGGCCCCCGAAGCCATGGAGAACGCGCACA...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACCACCCGCTGATCAATaGTTCCTTTGGGTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGPPADQ*FLWVPG
Trigger: CCCCGGAACCCAAAGGAACCATTGATCAGCGGGTGG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGCCACCCGCTGATCAATaGTTCCTTTGGGTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRPPADQ*FLWVPG
Trigger: CCCCGGAACCCAAAGGAACCATTGATCAGCGGGTGG...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGAACGGAGGCCAAAGTaGGTGAGGGAAGTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSERRPK*VREVAN
Trigger: GTTTGCTACTTCCCTCACCCACTTTGGCCTCCGTTC...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGCGACACTGATGGCTaGGCCTTCAGCCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHSDTDG*AFSHLP
Trigger: GGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCT...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGGGTATGCTCTGGCCCTaGACAGTGGCTAGATGCTTG +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKGMLWP*TVARCL
Trigger: CAAGCATCTAGCCACTGTCCAGGGCCAGAGCATACC...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTTCACAGGGCAACTGCTaGCTCTGCTCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISSQGNC*LCSQAL
Trigger: CAGTGCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGA...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp CAGATTTTACAAAACACACACATACACACACATACACACTTGCCCTTATGTTCTGCCCCGTACTCTCGTTaGCGCCGAAGTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QILQNTHIHTHTHLPLCSAPYSR*RRSGPA
Trigger: TGCTGGGCCACTTCGGCGTCAACGAGAGTACGGGGC...AGAACATAAGGGCAAGTGTGTATGTGTGTGTATGTGTGTGTTTTGTAAAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp CACCCGCTGATCAATGGTTCCTTTGGGTTCCGGGGAGGTTTATTCATGATGTCCAGACAGATTCACCTGTaGGAATTGACTGGTCAACTC +
Preference number: 4 (lower is better)
Translates to: HPLINGSFGFRGGLFMMSRQIHL*ELTGQL
Trigger: GAGTTGACCAGTCAATTCTCACAGGTGAATCTGTCT...GGACATCATGAATAAACCTCCCCGGAACCCAAAGGAACCATTGATCAGCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGGCCTGTGAAAGCTTTTaGCGTCACGTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKACESF*RHVLIL
Trigger: CAGGATGAGGACGTGACGTCAAAAGCTTTCACAGGC...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAACACCGTCAGCAGCAATaGACCACCATGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEHRQQQ*TTMQQH
Trigger: GTGCTGCTGCATGGTGGTTCATTGCTGCTGACGGTG...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR TCA 90 bp CAAGGTTTCAAGACCAGCATTTCTGATTTACTGTCCCTGAGGTGCCGCCCACACTTTCGGACAAGCTGTTaGGGGCGTTACACATTTCTA +
Preference number: 4 (lower is better)
Translates to: QGFKTSISDLLSLRCRPHFRTSC*GRYTFL
Trigger: TAGAAATGTGTAACGCCCTCAACAGCTTGTCCGAAA...GTGTGGGCGGCACCTCAGGGACAGTAAATCAGAAATGCTGGTCTTGAAACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCTGGTCTTTATGGGTTaGCCTGAGGAGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: HATEHPYISAKWFRKRLLLVFMG*PEEEML
Trigger: CAGCATCTCCTCCTCAGGTCAACCCATAAAGACCAG...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGGGCAACAAGCGACACTaGTGGCTGGGCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRGNKRH*WLGLQP
Trigger: TGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCC...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCCAATCGTTGCAGCTGTaGAAGCAGCGAGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSQSLQL*KQRDRQ
Trigger: TTGCCTGTCTCGCTGCTTTCACAGCTGCAACGATTG...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCACCTTCAGGAATGGCTaGTACAGCCAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETTFRNG*YSQGHC
Trigger: GCAGTGGCCCTGGCTGTAGCAGCCATTCCTGAAGGT...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTAATCGCAGTGTGTCGCTaGCACTACCCCACTCTCGAA +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLIAVCR*HYPTLE
Trigger: TTCGAGAGTGGGGTAGTGGCAGCGACACACTGCGAT...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACATGTTGTTGTAGATTaGCCGCCCCTCCTCAACGGC +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGHVVVD*PPLLNG
Trigger: GCCGTTGAGGAGGGGCGGGCAATCTACAACAACATG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAGCAATGAACCACCATaGAGCAGCACCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRSNEPP*SSTHGS
Trigger: GCTACCGTGGGTGCTGCTGCATGGTGGTTCATTGCT...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCCAACATCAGTCATaGACAGGGTTGGTAGATGTG +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTPQHQS*TGLVDV
Trigger: CACATCTACCAACCCTGTGCATGACTGATGTTGGGG...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGGGCCTTCAGCCACCTaGCCATCAGGAAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMGPSAT*PSGKNV
Trigger: CACATTCTTTCCTGATGGGCAGGTGGCTGAAGGCCC...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCCAGTCACAGGGCAACTaGTGGCTCTGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTQSQGN*WLCSQA
Trigger: TGCCTGTGAGCAGAGCCAGCAGTTGCCCTGTGACTG...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTCGTTGACGCCGAAGTaGCCCAGCACCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLSLTPK*PSTSST
Trigger: GGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAACGA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTAGGCAGGCGTCTCGCTaGGCGGAGGGGTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLRQASR*AEGLSS
Trigger: TGAACTCAACCCCTCCGCCCAGCGAGACGCCTGCCT...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp CAAGAGGACAAGGTCTTGGTTAGTGGTGCAGAGGGTGAGGTTGATGGAGAAGTGACGATTTTAGACTTGTaGGAGGGTTCAACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: QEDKVLVSGAEGEVDGEVTILDL*EGSTRA
Trigger: TGCTCGAGTTGAACCCTCCCACAAGTCTAAAATCGT...CACTTCTCCATCAACCTCACCCTCTGCACCACTAACCAAGACCTTGTCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CACCCGCTGATCAATGGTTCCTTTGGGTTCCGGGGAGGTTTATTCATGATGTCCGATCAATGGTTCCTTTaGGTTCCGGGGAGGTTTATT +
Preference number: 4 (lower is better)
Translates to: HPLINGSFGFRGGLFMMSDQWFL*VPGRFI
Trigger: AATAAACCTCCCCGGAACCCAAAGGAACCATTGATC...GGACATCATGAATAAACCTCCCCGGAACCCAAAGGAACCATTGATCAGCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACAATCCTCAGCAAGGACTaGTTTTCGGACAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LSCLMPPNPPQTPTICITILSKD*FSDKLL
Trigger: CAACAGCTTGTCCGAAAACCAGTCCTTGCTGAGGAT...TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACATTCAGCGGTGTGATCTaGAAGATGAGTGGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTFSGVI*KMSGKG
Trigger: ACCCTTGCCACTCATCTTCCAGATCACACCGCTGAA...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTATAGCACCATCAGCCACTaGGTCACGTTCAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: TEHPYISAKWFRKRLLQYSTISH*VTFSGV
Trigger: CACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT...ATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377685.9
ENST00000539276.7
ENST00000553144.1
CDS-3UTR CCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCACTCCGGCTTTTGTCTaGCTTGGGCCCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTTPAFV*LGPSWS
Trigger: TGACCAGGAGGGCCCAAGCCAGACAAAAGCCGGAGT...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTTCAGCCTGTTGGTCTaGCTGAAATGCCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ATEHPYISAKWFRKRLLQFSLLV*LKCLSP
Trigger: GGGAGAGAGGCATTTCAGCCAGACCAACAGGCTGAA...CTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACCAAATGTTCCCTGCTaGGCAAAGCAGCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLPNVPC*AKQPPF
Trigger: GAAGGGAGGCTGCTTTGCCCAGCAGGGAACATTTGG...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGAGACGTGGTATGCTCTaGCCCTGGACAGTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMRRGML*PWTVAR
Trigger: TCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCT...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACATCTTTTTATCTTGGTTaGCAGCTCGTGGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTSFYLG*QLVGQG
Trigger: TCCCTGACCCACGAGCTGTCAACCAAGATAAAAAGA...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGGGTGCACCTGTCAATaGCACCTTCAGGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKGCTCQ*HLQEHP
Trigger: AGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCC...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR TCA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGGGGTGCACCTGTCAATaGCACCTTCAGGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRGCTCQ*HLQEHP
Trigger: AGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCC...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTTTGACCCAGAGCAGCTaGACAGGAATCAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISLTQSS*TGIKAS
Trigger: CGAGGCTTTGATTCCTGTTCAGCTGCTCTGGGTCAA...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACGGGGAGGTTTATTCATaGTGTCCAGATCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYGEVYS*CPDQEG
Trigger: ACCCTCCTGATCTGGACATCATGAATAAACCTCCCC...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAACACCGTCAGCAGCAATaGACCACCATGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKHRQQQ*TTMQQH
Trigger: GTGCTGCTGCATGGTGGTTCATTGCTGCTGACGGTG...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR TCA 90 bp TGGGTGCACCTGTCAATGACACCTTCAGGAGCACCCTTCACAAACATCTTGCTCACAAAATCTAGAGTATaGAACCTCCATCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: WVHLSMTPSGAPFTNILLTKSRV*NLHHQP
Trigger: TGGCTGGTGATGGAGGTTTCATACTCTAGATTTTGT...GAGCAAGATGTTTGTGAAGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAAAGCAATGTTCTGGGATaGCTCCTGGCAGCTGCGAAC +
Preference number: 4 (lower is better)
Translates to: YLPETMSVRRSLLPAQKESNVLG*LLAAAN
Trigger: GTTCGCAGCTGCCAGGAGTCATCCCAGAACATTGCT...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGATGGAGGAAAACCCCATaGGGCAGACACAATCGTTGC +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGWRKTP*GRHNRC
Trigger: GCAACGATTGTGTCTGCCTCATGGGGTTTTCCTCCA...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGTCCACCGTCTTGGTGTaGGCGTTCTCCATGGCTTCG +
Preference number: 4 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRSTVLV*AFSMAS
Trigger: CGAAGCCATGGAGAACGCGCACACCAAGACGGTGGA...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp CAAGAGGACAAGGTCTTGGTTAGTGGTGCAGAGGGTGAGGTTGATGGAGAAGTGAGCAAGTCTTCAAACTaGTCAATCACAAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QEDKVLVSGAEGEVDGEVSKSSN*SITSSS
Trigger: GCTGGAACTTGTGATTGAGCAGTTTGAAGACTTGCT...CACTTCTCCATCAACCTCACCCTCTGCACCACTAACCAAGACCTTGTCCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp TCTACAATATCACCAGGAACTATGTCTTTAGCTTTAATCCGCTGCACACTCTTTGATGACCCGGATGCCTaGTTGCCGGCACAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: STISPGTMSLALIRCTLFDDPDA*LPAQLH
Trigger: GTGAAGCTGTGCCGGCAAGCAGGCATCCGGGTCATC...AAAGAGTGTGCAGCGGATTAAAGCTAAAGACATAGTTCCTGGTGATATTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR GCA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGCGGTTACTCCAGTATTaGAGGTTCCAGGTAGTTGCG +
Preference number: 4 (lower is better)
Translates to: ISYDILQRNVATWLTASKRLLQY*RFQVVA
Trigger: CGCAACTACCTGGAACCTGCAATACTGGAGTAACCG...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS-3UTR GCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACTGAAACCATGTCTGTaGGACGCTCATTGTTACCAG +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTLKPCL*DAHCYQ
Trigger: CTGGTAACAATGAGCGTCGCACAGACATGGTTTCAG...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR GCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGCACTCAAGTCAGTTTaGAGCCCAGAGATGCACTCC +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMALKSV*SPEMHS
Trigger: GGAGTGCATCTCTGGGCTGCAAACTGACTTGAGTGC...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCTTCTTCTCTTCTCAGTaGGTTGTCATGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSFFSSQ*VVMSGQ
Trigger: CTGGCCACTCATGACAACCCACTGAGAAGAGAAGAA...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTATACATGGACAGGCAGATaGAGCCCACGAGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: TEHPYISAKWFRKRLLQYTWTGR*SPRARC
Trigger: ACATCTGGCTCGTGGGCTCCATCTGCCTGTCCATGT...ATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGAGAAATGTGGCGACTTaGCTGACGGCTTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKRNVAT*LTASKF
Trigger: GAACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCT...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTAGAAATGTGGCGACTTaGCTGACGGCTTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGRNVAT*LTASKF
Trigger: GAACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCT...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TGGGTGCACCTGTCAATGACACCTTCAGGAGCACCCTTCACAAACATCTTGCTCCGGTTACTCCAGTATTaGTTAGTTGATGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: WVHLSMTPSGAPFTNILLRLLQY*LVDGCW
Trigger: CCAACATCCATCAACTAACCAATACTGGAGTAACCG...GAGCAAGATGTTTGTGAAGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCTTTTTATCTTGGTTaGCAGCTCGTGGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYSFYLG*QLVGQG
Trigger: TCCCTGACCCACGAGCTGTCAACCAAGATAAAAAGA...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCGCCTGTGAAAGCTTTTaGCGTCACGTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTACESF*RHVLIL
Trigger: CAGGATGAGGACGTGACGTCAAAAGCTTTCACAGGC...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGGGGAGGTTTATTCATaGTGTCCAGATCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMGEVYS*CPDQEG
Trigger: ACCCTCCTGATCTGGACATCATGAATAAACCTCCCC...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp CAAGAGGACAAGGTCTTGGTTAGTGGTGCAGAGGGTGAGGTTGATGGAGAAGTGATAGATTTATTTACCTaGAACCATGTCTGTGCGACG +
Preference number: 4 (lower is better)
Translates to: QEDKVLVSGAEGEVDGEVIDLFT*NHVCAT
Trigger: CGTCGCACAGACATGGTTTCAGGTAAATAAATCTAT...CACTTCTCCATCAACCTCACCCTCTGCACCACTAACCAAGACCTTGTCCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACTCAGTAAAGGAGGGTaGAGCCTACCCTTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGLSKGG*SLPFLL
Trigger: TAGCAAGAAGGGTAGGCTTCACCCTCCTTTACTGAG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTCGGCTCCGCGGCGGCTaGTCTAATAGCATTTATCGG +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLRLRGG*SNSIYR
Trigger: CCGATAAATGCTATTAGAGCAGCCGCCGCGGAGCCG...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTACCTTCAGGAATGGCTaGTACAGCCAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLTFRNG*YSQGHC
Trigger: GCAGTGGCCCTGGCTGTAGCAGCCATTCCTGAAGGT...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACATCGCAGTGTGTCGCTaGCACTACCCCACTCTCGAA +
Preference number: 4 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHIAVCR*HYPTLE
Trigger: TTCGAGAGTGGGGTAGTGGCAGCGACACACTGCGAT...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR GCA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAACATGTTGTTGTAGATTaGCCGCCCCTCCTCAACGGC +
Preference number: 4 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKHVVVD*PPLLNG
Trigger: GCCGTTGAGGAGGGGCGGGCAATCTACAACAACATG...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR GCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGAATCCCATCGGTGCATaGCGAGAACGAGCAGGATTT +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMNPIGA*RERAGF
Trigger: AAATCCTGCTCGTTCTCGGCATGCACCGATGGGATT...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTTGGTCTGGCTGAAATaGCTCTCTCCCCACTCCGGC +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLLVWLK*LSPHSG
Trigger: GCCGGAGTGGGGAGAGAGGCATTTCAGCCAGACCAA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGAGGGCCTCACTCTGTTaGCCAGGCTGGTTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRRASLC*PGWFEY
Trigger: GTACTCAAACCAGCCTGGGCAACAGAGTGAGGCCCT...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAGTCGGCCAGATGCCCTaGTTGCCTGGGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLVGQMP*LPGSSL
Trigger: CAGTGAGCTCCCAGGCAAGCAGGGCATCTGGCCGAC...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGAGCAAGGTTTTTCCCTaGACCTACCGTTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRSKVFP*TYRWSP
Trigger: GGGGCTCCAACGGTAGGTGCAGGGAAAAACCTTGCT...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTCTTCCAACTCGAATGTaGGTGCACCTGTCAATGACA +
Preference number: 4 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGLPTRM*VHLSMT
Trigger: TGTCATTGACAGGTGCACCCACATTCGAGTTGGAAG...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCTTCCAACTCGAATGTaGGTGCACCTGTCAATGACA +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKLPTRM*VHLSMT
Trigger: TGTCATTGACAGGTGCACCCACATTCGAGTTGGAAG...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACAACGATTTTAGACTTGTaGGAGGGTTCAACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTTILDL*EGSTRA
Trigger: TGCTCGAGTTGAACCCTCCCACAAGTCTAAAATCGT...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AGATTGCACAATCCACGCCTTCAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAACGATTTTAGACTTGTaGGAGGGTTCAACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: RLHNPRLQSPGCPLYTVGTILDL*EGSTRA
Trigger: TGCTCGAGTTGAACCCTCCCACAAGTCTAAAATCGT...TCCTACAGTGTAAAGAGGACAACCCGGACTTTGAAGGCGTGGATTGTGCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGATCCTCAGCAAGGACTaGTTTTCGGACAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKILSKD*FSDKLL
Trigger: CAACAGCTTGTCCGAAAACCAGTCCTTGCTGAGGAT...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAACATGGACAGGCAGATaGAGCCCACGAGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKTWTGR*SPRARC
Trigger: ACATCTGGCTCGTGGGCTCCATCTGCCTGTCCATGT...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGGATCTGGAAGATGAGTaGCAAGGGTTCGACATAGAG +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKDLEDE*QGFDIE
Trigger: CTCTATGTCGAACCCTTGCCACTCATCTTCCAGATC...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGGATCTGGAAGATGAGTaGCAAGGGTTCGACATAGAG +
Preference number: 4 (lower is better)
Translates to: ISYDILQRNVATWLTASKDLEDE*QGFDIE
Trigger: CTCTATGTCGAACCCTTGCCACTCATCTTCCAGATC...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTATTCAGCGGTGTGATCTaGAAGATGAGTGGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLFSGVI*KMSGKG
Trigger: ACCCTTGCCACTCATCTTCCAGATCACACCGCTGAA...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCCACTGGAGAGGGATCTaGCTACTTACAACCGAAGGC +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTHWRGI*LLTTEG
Trigger: GCCTTCGGTTGTAAGTAGCCAGATCCCTCTCCAGTG...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGGGTGTTTGGACAATTTaGTGGTTACAGTCACAGGGC +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKGVWTI*WLQSQG
Trigger: GCCCTGTGACTGTAACCACCAAATTGTCCAAACACC...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACAAGTGCCCAATATTTATaGTCCAGACTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: LSCLMPPNPPQTPTICITSAQYL*SRLQCK
Trigger: TTTGCATTGCAGTCTGGATCATAAATATTGGGCACT...TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGAACATCCTGCAGACTaGCATCTGGTTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHEHPAD*HLVCCK
Trigger: CTTACAACAAACCAGATGTCAGTCTGCAGGATGTTC...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACCAAACTCCCGGCCTGTaGAAGCTTTTGACGTCACGT +
Preference number: 4 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHQTPGL*KLLTSR
Trigger: ACGTGACGTCAAAAGCTTTCACAGGCCGGGAGTTTG...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR TCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCAAAAGAGCCACCCGCTaGTCAATGGTTCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTKRATR*SMVPLG
Trigger: ACCCAAAGGAACCATTGATCAGCGGGTGGCTCTTTT...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGTTTCGGACAAGCTGTTaGGGGCGTTACACATTTCTA +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKFRTSC*GRYTFL
Trigger: TAGAAATGTGTAACGCCCTCAACAGCTTGTCCGAAA...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACAGTACAACTAAAGTTCTaGGCTAAGAACTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSCLMPPNPPQTPTICITVQLKF*AKNWRE
Trigger: TTCTCTCCAGTTCTTAGCTCAGAACTTTAGTTGTAC...TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGCTTACACACTGTTGGTaGGACTCATCTCGAACATGC +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRLTHCW*DSSRTC
Trigger: GCATGTTCGAGATGAGTCTCACCAACAGTGTGTAAG...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTCTTACACACTGTTGGTaGGACTCATCTCGAACATGC +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISLTHCW*DSSRTC
Trigger: GCATGTTCGAGATGAGTCTCACCAACAGTGTGTAAG...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp CAGATTTTACAAAACACACACATACACACACATACACACTTGCCCTTATGTTCTGCCTGTTGGTCTGGCTaGAATGCCTCTCTCCCCACT +
Preference number: 4 (lower is better)
Translates to: QILQNTHIHTHTHLPLCSACWSG*NASLPT
Trigger: AGTGGGGAGAGAGGCATTTCAGCCAGACCAACAGGC...AGAACATAAGGGCAAGTGTGTATGTGTGTGTATGTGTGTGTTTTGTAAAATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AGATTGCACAATCCACGCCTTCAAAGTCCGGGTTGTCCTCTTTACACTGTAGGACCAGTATTGGTTAGTTaGTGGATGTTGGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: RLHNPRLQSPGCPLYTVGPVLVS*WMLEGI
Trigger: AATGCCTTCCAACATCCATCAACTAACCAATACTGG...TCCTACAGTGTAAAGAGGACAACCCGGACTTTGAAGGCGTGGATTGTGCAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR GCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACAAGCAAGTCTTCAAACTaGTCAATCACAAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTSKSSN*SITSSS
Trigger: GCTGGAACTTGTGATTGAGCAGTTTGAAGACTTGCT...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACATCAGCATTTCTTTCCTaGCATACACCCACAATTGCA +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTSAFLS*HTPTIA
Trigger: TGCAATTGTGGGTGTATGGCAGGAAAGAAATGCTGA...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGTCTCTCCTGTTCTGTTaGCACCATTTCATCCCGGAT +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMSLLFC*HHFIPD
Trigger: ATCCGGGATGAAATGGTGGCAACAGAACAGGAGAGA...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGATCTCTCCTGTTCTGTTaGCACCATTTCATCCCGGAT +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGSLLFC*HHFIPD
Trigger: ATCCGGGATGAAATGGTGGCAACAGAACAGGAGAGA...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCACCGGGTCATTGAAGTaGCCAATATTTATGATCCAG +
Preference number: 4 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSTGSLK*PIFMIQ
Trigger: CTGGATCATAAATATTGGGCACTTCAATGACCCGGT...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACAGACTCATCTCGAACATaGGCAAACATTGATCGTAGT +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTDSSRT*ANIDRS
Trigger: ACTACGATCAATGTTTGCGCATGTTCGAGATGAGTC...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACAAACTCCAACCATCTaGATTACATCTACTGGCCAT +
Preference number: 4 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTQTPTI*ITSTGH
Trigger: ATGGCCAGTAGATGTAATGCAGATGGTTGGAGTTTG...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTACTGAGGCCAGGGATGTaGCAAGACCACGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLLRPGM*QDHGAG
Trigger: TCCAGCACCGTGGTCTTGGCACATCCCTGGCCTCAG...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGGGATCATCTGCATTCTaGAGAGTGGTGTCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRGSSAF*RVVSQL
Trigger: TAACTGGGACACCACTCTGCAGAATGCAGATGATCC...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTAACCCTTCTTGCTAACTaGAGCGGGTGTTTGGACAAT +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLTLLAN*SGCLDN
Trigger: ATTGTCCAAACACCCGCTGCAGTTAGCAAGAAGGGT...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCCCTGTGAGAATTGACTaGTCAACTCTTAGTGTGGTA +
Preference number: 4 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSPVRID*STLSVV
Trigger: TACCACACTAAGAGTTGACCAGTCAATTCTCACAGG...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCGATCAATGGTTCCTTTaGGTTCCGGGGAGGTTTATT +
Preference number: 4 (lower is better)
Translates to: HATEHPYISAKWFRKRLLDQWFL*VPGRFI
Trigger: AATAAACCTCCCCGGAACCCAAAGGAACCATTGATC...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCGTAGAAGGACACTCTTaGACCACCGTCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTVEGHS*TTVSSN
Trigger: ATTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTAC...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGCATTGTCATCGGGTATaGGGATTCAAAGATTGCACA +
Preference number: 4 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRHCHRV*GFKDCT
Trigger: TGTGCAATCTTTGAATCCCCATACCCGATGACAATG...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CCA 90 bp ACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTATTTCAGCGGTGTGATCTaGAAGATGAGTGGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: TEHPYISAKWFRKRLLQYFSGVI*KMSGKG
Trigger: ACCCTTGCCACTCATCTTCCAGATCACACCGCTGAA...ATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATTACAGTTATCTCACTTaGTGGCAGTCACCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHYSYLT*WQSPLG
Trigger: GCCTAAAGGTGACTGCCACCAAGTGAGATAACTGTA...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGTGCACTCCTTGCATTTaGCCCATTCAACCCATTTCT +
Preference number: 4 (lower is better)
Translates to: ISYDILQRNVATWLTASKCTPCI*PIQPIS
Trigger: AGAAATGGGTTGAATGGGCCAAATGCAAGGAGTGCA...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCTGGACCTGGTCTTTATaGGTTGACCTGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETWTWSL*VDLRRR
Trigger: TCTCCTCCTCAGGTCAACCCATAAAGACCAGGTCCA...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACCCAAGACCACGGTGCTaGACCTGGTCTTTATGGGTT +
Preference number: 4 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHPRPRC*TWSLWV
Trigger: AACCCATAAAGACCAGGTCCAGCACCGTGGTCTTGG...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGACTCCTCGTGTCGTCTaGCTACAGAATAAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMTPRVV*LQNKGS
Trigger: AGAGCCTTTATTCTGTAGCCAGACGACACGAGGAGT...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp CTACCCCACTCTCGAATGACAGACATGATCTTCTGTTaGACTCCAGAGGTCATAGGAACCTTAGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: LPHSRMTDMIFC*TPEVIGTLVLP
Trigger: TGGAAGTACTAAGGTTCCTATGACCTCTGGAGTCAAACAGAAGATCATGTCTGTCATTCGAGAGTGGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGAGACAGATTCACCTGTaGGAATTGACTGGTCAACTC +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMRQIHL*ELTGQL
Trigger: GAGTTGACCAGTCAATTCTCACAGGTGAATCTGTCT...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCTCTTTTTATCTTGGTTaGCAGCTCGTGGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETSFYLG*QLVGQG
Trigger: TCCCTGACCCACGAGCTGTCAACCAAGATAAAAAGA...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTACACCGTCAGCAGCAATaGACCACCATGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLHRQQQ*TTMQQH
Trigger: GTGCTGCTGCATGGTGGTTCATTGCTGCTGACGGTG...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGTTTCGGACAAGCTGTTaGGGGCGTTACACATTTCTA +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRFRTSC*GRYTFL
Trigger: TAGAAATGTGTAACGCCCTCAACAGCTTGTCCGAAA...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACAAAACAATACTGACTaGGGTAGCAAGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGQNNTD*GSKTLL
Trigger: GAGCAGAGTCTTGCTACCTCAGTCAGTATTGTTTTG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGAGAATACAATTCCTATaGCTACCTACACAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKRIQFL*LPTQQS
Trigger: GCTCTGCTGTGTAGGTAGTCATAGGAATTGTATTCT...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCTTAGCTTTAATCCGCTaGACACTCTTTCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSLALIR*TLFLSC
Trigger: ACAGGACAGAAAGAGTGTGCAGCGGATTAAAGCTAA...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCACCGGGTCATTGAAGTaGCCAATATTTATGATCCAG +
Preference number: 4 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSTGSLK*PIFMIQ
Trigger: CTGGATCATAAATATTGGGCACTTCAATGACCCGGT...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGTGGGGATTCAAAGATTaGACAATCCACGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ISYDILQRNVATWLTASKWGFKD*TIHAFK
Trigger: TTTGAAGGCGTGGATTGTGCAATCTTTGAATCCCCA...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGAGGCCAGCAGAAACTTaGATAAAATGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRRPAET*IKCTSQ
Trigger: CTGTGATGTACATTTTATGCAAGTTTCTGCTGGCCT...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTGGCAGACACAATCGTTaGAGCTGTGAAAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLGRHNR*SCESSE
Trigger: CTCGCTGCTTTCACAGCTGCAACGATTGTGTCTGCC...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCTGCAGACTGACATCTaGTTTGTTGTAAGTGTACCA +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKLQTDI*FVVSVP
Trigger: TGGTACACTTACAACAAACCAGATGTCAGTCTGCAG...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAACTTCCAACTCGAATGTaGGTGCACCTGTCAATGACA +
Preference number: 4 (lower is better)
Translates to: YLPETMSVRRSLLPAQKELPTRM*VHLSMT
Trigger: TGTCATTGACAGGTGCACCCACATTCGAGTTGGAAG...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CCA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGTAGAAGGACACTCTTaGACCACCGTCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKVEGHS*TTVSSN
Trigger: ATTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTAC...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCATCCTCAGCAAGGACTaGTTTTCGGACAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTILSKD*FSDKLL
Trigger: CAACAGCTTGTCCGAAAACCAGTCCTTGCTGAGGAT...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp CAGATTTTACAAAACACACACATACACACACATACACACTTGCCCTTATGTTCTACATGGACAGGCAGATaGAGCCCACGAGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: QILQNTHIHTHTHLPLCSTWTGR*SPRARC
Trigger: ACATCTGGCTCGTGGGCTCCATCTGCCTGTCCATGT...AGAACATAAGGGCAAGTGTGTATGTGTGTGTATGTGTGTGTTTTGTAAAATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCGATCTGGAAGATGAGTaGCAAGGGTTCGACATAGAG +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTDLEDE*QGFDIE
Trigger: CTCTATGTCGAACCCTTGCCACTCATCTTCCAGATC...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGAGAAATGTGGCGACTTaGCTGACGGCTTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRRNVAT*LTASKF
Trigger: GAACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCT...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGATGTTCCAATGTCACTaGAGAGGGATCTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMMFQCH*RGIWLL
Trigger: AAGTAGCCAGATCCCTCTCCAGTGACATTGGAACAT...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTATGTTCCAATGTCACTaGAGAGGGATCTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISMFQCH*RGIWLL
Trigger: AAGTAGCCAGATCCCTCTCCAGTGACATTGGAACAT...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGATGTTGGAAGGCATTaGAGGAAAACACCACAGTTA +
Preference number: 4 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHDVGRH*RKTPQL
Trigger: TAACTGTGGTGTTTTCCTCCAATGCCTTCCAACATC...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACTGAGCTAATCTTGTaGTCTCAGGTCTTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRTELIL*SQVLGL
Trigger: CAGACCTAAGACCTGAGACCACAAGATTAGCTCAGT...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCAGACAGATTCACCTGTaGGAATTGACTGGTCAACTC +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTRQIHL*ELTGQL
Trigger: GAGTTGACCAGTCAATTCTCACAGGTGAATCTGTCT...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGAGTGCCCAATATTTATaGTCCAGACTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: ISYDILQRNVATWLTASKSAQYL*SRLQCK
Trigger: TTTGCATTGCAGTCTGGATCATAAATATTGGGCACT...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTATGTACCAGTCTTGTCTaGGCAGATAACAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLCTSLV*ADNRST
Trigger: TGTACTTCTGTTATCTGCTCAGACAAGACTGGTACA...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGTGTACCAGTCTTGTCTaGGCAGATAACAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMCTSLV*ADNRST
Trigger: TGTACTTCTGTTATCTGCTCAGACAAGACTGGTACA...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGGTGAAAACTCTAGAGTaGATTCCTTTTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRVKTLE*IPFSSA
Trigger: AGCTGATGAAAAAGGAATTCACTCTAGAGTTTTCAC...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGATAGATTTATTTACCTaGAACCATGTCTGTGCGACG +
Preference number: 4 (lower is better)
Translates to: ISYDILQRNVATWLTASKIDLFT*NHVCAT
Trigger: CGTCGCACAGACATGGTTTCAGGTAAATAAATCTAT...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR TCA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTCTTGTTACACCTCATaGTGCTCAAACTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGSCYTS*CSNWQN
Trigger: ATTTTGCCAGTTTGAGCATCATGAGGTGTAACAAGA...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR TCA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACCAAGACCAGCATTTCTaGTTTACTGTCCCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHQDQHF*FTVPEV
Trigger: CACCTCAGGGACAGTAAATCAGAAATGCTGGTCTTG...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACCTGTCGATACACTTTaGCCATTTCAGGCTCATATT +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLPVDTL*PFQAHI
Trigger: AATATGAGCCTGAAATGGGCAAAGTGTATCGACAGG...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTGGTGTTAACTCCAGTTaGTACCACCACTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLGVNSS*YHHSHS
Trigger: GCTATGGGAGTGGTGGTAGCAACTGGAGTTAACACC...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGTTCATACACACCCTTTaGCTCATTGTAATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKFIHTL*LIVIQS
Trigger: GCTTTGGATTACAATGAGGCAAAGGGTGTGTATGAA...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTTCATACACACCCTTTaGCTCATTGTAATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYFIHTL*LIVIQS
Trigger: GCTTTGGATTACAATGAGGCAAAGGGTGTGTATGAA...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGTGCTCATTGATGTCCTaGTTGGTTTATTTGGTGTAC +
Preference number: 4 (lower is better)
Translates to: ISYDILQRNVATWLTASKCSLMS*LVYLVY
Trigger: GTACACCAAATAAACCAAGCAGGACATCAATGAGCA...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTGCTCATTGATGTCCTaGTTGGTTTATTTGGTGTAC +
Preference number: 4 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYCSLMS*LVYLVY
Trigger: GTACACCAAATAAACCAAGCAGGACATCAATGAGCA...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTAATCCCATCGGTGCATaGCGAGAACGAGCAGGATTT +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLNPIGA*RERAGF
Trigger: AAATCCTGCTCGTTCTCGGCATGCACCGATGGGATT...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAAGGAAATCCCATCGGTaGATGCCGAGAACGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLRKSHR*MPRTSR
Trigger: CCTGCTCGTTCTCGGCATGCACCGATGGGATTTCCT...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGATTTTAGCAATAGTCTaGACAGCTCCTTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRILAIV*TAPSAC
Trigger: ACAGGCTGAAGGAGCTGTGCAGACTATTGCTAAAAT...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAATGGACAGTGGCTAGATaGTTGGTAGACACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKWTVAR*LVDTEL
Trigger: TAGCTCAGTGTCTACCAAGCATCTAGCCACTGTCCA...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTCCTGTGAGAATTGACTaGTCAACTCTTAGTGTGGTA +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISPVRID*STLSVV
Trigger: TACCACACTAAGAGTTGACCAGTCAATTCTCACAGG...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGCTGCAGACTGACATCTaGTTTGTTGTAAGTGTACCA +
Preference number: 4 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMLQTDI*FVVSVP
Trigger: TGGTACACTTACAACAAACCAGATGTCAGTCTGCAG...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCGATCAATGGTTCCTTTaGGTTCCGGGGAGGTTTATT +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTDQWFL*VPGRFI
Trigger: AATAAACCTCCCCGGAACCCAAAGGAACCATTGATC...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTATGTTTGGACAATTTGGTaGTTACAGTCACAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: TEHPYISAKWFRKRLLQYVWTIW*LQSQGN
Trigger: GTTGCCCTGTGACTGTAACCACCAAATTGTCCAAAC...ATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp CACCTTCAGGAGCACCCTTCACAAACATCTTGCTCATaGATGTCCTGCTTGGTTTATTTGGTGTACAGTAAA +
Preference number: 4 (lower is better)
Translates to: HLQEHPSQTSCS*MSCLVYLVYSK
Trigger: TTTACTGTACACCAAATAAACCAAGCAGGACATCAATGAGCAAGATGTTTGTGAAGGGTGCTCCTGAAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp CAGACCATCATACTGGTGACAATTCACTGGTTTATCATCTTTATGCACTTCTCCGAACATCCTGCAGACTaGCATCTGGTTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: QTIILVTIHWFIIFMHFSEHPAD*HLVCCK
Trigger: CTTACAACAAACCAGATGTCAGTCTGCAGGATGTTC...GGAGAAGTGCATAAAGATGATAAACCAGTGAATTGTCACCAGTATGATGGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGAATAGGTGCATAAGTTaGTCCAGTTATGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKNRCIS*SSYGKL
Trigger: GAGTTTACCATAACTGGATCAACTTATGCACCTATT...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTAGACCATCATACTGGTaGCAATTCACTGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISRPSYW*QFTGLS
Trigger: TGATAAACCAGTGAATTGTCACCAGTATGATGGTCT...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACGTGAAAACTCTAGAGTaGATTCCTTTTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYVKTLE*IPFSSA
Trigger: AGCTGATGAAAAAGGAATTCACTCTAGAGTTTTCAC...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGAAACATCTTGCTCATTaGTGTCCTGCTTGGTTTATT +
Preference number: 4 (lower is better)
Translates to: THMHATEHPYISAKWFRKKHLAH*CPAWFI
Trigger: AATAAACCAAGCAGGACATCAATGAGCAAGATGTTT...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTACAAACTCCCGGCCTGTaGAAGCTTTTGACGTCACGT +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLQTPGL*KLLTSR
Trigger: ACGTGACGTCAAAAGCTTTCACAGGCCGGGAGTTTG...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp CAGATTTTACAAAACACACACATACACACACATACACACTTGCCCTTATGTTCTAAAAGAGCCACCCGCTaGTCAATGGTTCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QILQNTHIHTHTHLPLCSKRATR*SMVPLG
Trigger: ACCCAAAGGAACCATTGATCAGCGGGTGGCTCTTTT...AGAACATAAGGGCAAGTGTGTATGTGTGTGTATGTGTGTGTTTTGTAAAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAGGAAATCAGCTTCATaGAATACAGAGAGGAAACGT +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRRKSAS*NTERKR
Trigger: ACGTTTCCTCTCTGTATTTCATGAAGCTGATTTCCT...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAGCAAGTCTTCAAACTaGTCAATCACAAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETSKSSN*SITSSS
Trigger: GCTGGAACTTGTGATTGAGCAGTTTGAAGACTTGCT...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCTCAGCATTTCTTTCCTaGCATACACCCACAATTGCA +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETSAFLS*HTPTIA
Trigger: TGCAATTGTGGGTGTATGGCAGGAAAGAAATGCTGA...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCCCTGTCGATACACTTTaGCCATTTCAGGCTCATATT +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTPVDTL*PFQAHI
Trigger: AATATGAGCCTGAAATGGGCAAAGTGTATCGACAGG...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCTTAGCTTTAATCCGCTaGACACTCTTTCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTLALIR*TLFLSC
Trigger: ACAGGACAGAAAGAGTGTGCAGCGGATTAAAGCTAA...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTCTCTCCTGTTCTGTTaGCACCATTTCATCCCGGAT +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLSLLFC*HHFIPD
Trigger: ATCCGGGATGAAATGGTGGCAACAGAACAGGAGAGA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTGGTTTATCATCTTTATaGACTTCTCCAATAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGGLSSL*TSPIGA
Trigger: TGCACCTATTGGAGAAGTGCATAAAGATGATAAACC...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTCTGAAACCATGTCTGTaGGACGCTCATTGTTACCAG +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLLKPCL*DAHCYQ
Trigger: CTGGTAACAATGAGCGTCGCACAGACATGGTTTCAG...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR GCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTAGGCCAGCAGAAACTTaGATAAAATGTACATCACAG +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISRPAET*IKCTSQ
Trigger: CTGTGATGTACATTTTATGCAAGTTTCTGCTGGCCT...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCGACTCATCTCGAACATaGGCAAACATTGATCGTAGT +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTDSSRT*ANIDRS
Trigger: ACTACGATCAATGTTTGCGCATGTTCGAGATGAGTC...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACCTGCTTGGTTTATTTaGTGTACAGTAAACCGACAT +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGPAWFI*CTVNRH
Trigger: ATGTCGGTTTACTGTACACCAAATAAACCAAGCAGG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTTCTTCTCTTCTCAGTaGGTTGTCATGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLFFSSQ*VVMSGQ
Trigger: CTGGCCACTCATGACAACCCACTGAGAAGAGAAGAA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAACATTGTCATCGGGTATaGGGATTCAAAGATTGCACA +
Preference number: 4 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEHCHRV*GFKDCT
Trigger: TGTGCAATCTTTGAATCCCCATACCCGATGACAATG...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAACTGGAGAGAAAGTTaGACATGTCTGTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETNWRES*TCLLVP
Trigger: TGGGACTAACAGACATGTCCAACTTTCTCTCCAGTT...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTATTAGTTGATGGATGTTaGAAGGCATTGGAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: MHATEHPYISAKWFRKRLLVDGC*KALEEN
Trigger: GTTTTCCTCCAATGCCTTCCAACATCCATCAACTAA...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
3UTR CAA 72 bp CACCCTTCACAAACATCTTGCTCATTGATGTCCTGCTaGGTTTATTTGGTGTACAGTAAACCGACATTGACT +
Preference number: 4 (lower is better)
Translates to: HPSQTSCSLMSC*VYLVYSKPTLT
Trigger: AGTCAATGTCGGTTTACTGTACACCAAATAAACCAAGCAGGACATCAATGAGCAAGATGTTTGTGAAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTGAACATCCTGCAGACTaGCATCTGGTTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLEHPAD*HLVCCK
Trigger: CTTACAACAAACCAGATGTCAGTCTGCAGGATGTTC...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAGACCATCATACTGGTaGCAATTCACTGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETRPSYW*QFTGLS
Trigger: TGATAAACCAGTGAATTGTCACCAGTATGATGGTCT...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCAGACCATCATACTGGTaGCAATTCACTGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTRPSYW*QFTGLS
Trigger: TGATAAACCAGTGAATTGTCACCAGTATGATGGTCT...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAAAAAGAGCCACCCGCTaGTCAATGGTTCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLKRATR*SMVPLG
Trigger: ACCCAAAGGAACCATTGATCAGCGGGTGGCTCTTTT...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAACAAAATCTAGAGTATaGAACCTCCATCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKTKSRV*NLHHQP
Trigger: TGGCTGGTGATGGAGGTTTCATACTCTAGATTTTGT...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp CAGACCATCATACTGGTGACAATTCACTGGTTTATCATCTTTATGCACTTCTCCTCAGCATTTCTTTCCTaGCATACACCCACAATTGCA +
Preference number: 4 (lower is better)
Translates to: QTIILVTIHWFIIFMHFSSAFLS*HTPTIA
Trigger: TGCAATTGTGGGTGTATGGCAGGAAAGAAATGCTGA...GGAGAAGTGCATAAAGATGATAAACCAGTGAATTGTCACCAGTATGATGGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR GCA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGGTTTATCATCTTTATaGACTTCTCCAATAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VDVLLKTHMHATEHPYISGLSSL*TSPIGA
Trigger: TGCACCTATTGGAGAAGTGCATAAAGATGATAAACC...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGTGGGGATTCAAAGATTaGACAATCCACGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRWGFKD*TIHAFK
Trigger: TTTGAAGGCGTGGATTGTGCAATCTTTGAATCCCCA...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTATCCTGCTTGGTTTATTTaGTGTACAGTAAACCGACAT +
Preference number: 4 (lower is better)
Translates to: TEHPYISAKWFRKRLLQYPAWFI*CTVNRH
Trigger: ATGTCGGTTTACTGTACACCAAATAAACCAAGCAGG...ATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCGAAACCAAACTTCTCTaGAGAGGCTTTCTGATTAAG +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETETKLL*RGFLIK
Trigger: CTTAATCAGAAAGCCTCTCCAGAGAAGTTTGGTTTC...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp ACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTATGAAACCAAACTTCTCTaGAGAGGCTTTCTGATTAAG +
Preference number: 4 (lower is better)
Translates to: TEHPYISAKWFRKRLLQYETKLL*RGFLIK
Trigger: CTTAATCAGAAAGCCTCTCCAGAGAAGTTTGGTTTC...ATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTGTACCAGTCTTGTCTaGGCAGATAACAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLCTSLV*ADNRST
Trigger: TGTACTTCTGTTATCTGCTCAGACAAGACTGGTACA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAAAATAGGTGCATAAGTTaGTCCAGTTATGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: YLPETMSVRRSLLPAQKENRCIS*SSYGKL
Trigger: GAGTTTACCATAACTGGATCAACTTATGCACCTATT...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR TCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACATCTTGCTCATTaGTGTCCTGCTTGGTTTATT +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETKHLAH*CPAWFI
Trigger: AATAAACCAAGCAGGACATCAATGAGCAAGATGTTT...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAAATACTCACGTTAGTTaGTGGATGTTGGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKNTHVS*WMLEGI
Trigger: AATGCCTTCCAACATCCATCAACTAACGTGAGTATT...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR GCA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAATTTATGATCCAGACTaGAATGCAAATAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGIYDPD*NANKGD
Trigger: ATCTCCCTTATTTGCATTGCAGTCTGGATCATAAAT...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTGGGGATTCAAAGATTaGACAATCCACGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLWGFKD*TIHAFK
Trigger: TTTGAAGGCGTGGATTGTGCAATCTTTGAATCCCCA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGTTACAACCGAAGGCATaGATTACAATTGAATACTGT +
Preference number: 4 (lower is better)
Translates to: KTHMHATEHPYISAKWFRLQPKA*ITIEYC
Trigger: ACAGTATTCAATTGTAATGCATGCCTTCGGTTGTAA...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTCATTGTCATCGGGTATaGGGATTCAAAGATTGCACA +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLHCHRV*GFKDCT
Trigger: TGTGCAATCTTTGAATCCCCATACCCGATGACAATG...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CCA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACGAAACCAAACTTCTCTaGAGAGGCTTTCTGATTAAG +
Preference number: 4 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHETKLL*RGFLIK
Trigger: CTTAATCAGAAAGCCTCTCCAGAGAAGTTTGGTTTC...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CCA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACATACCCAGAGTTCACTaGTTCAGTTACTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHIPRVH*FSYLLS
Trigger: TGAAAGCAAGTAACTGAACCAGTGAACTCTGGGTAT...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
3UTR CAA 72 bp CAAACATCTTGCTCATTGATGTCCTGCTTGGTTTATTaGGTGTACAGTAAACCGACATTGACTTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: QTSCSLMSCLVY*VYSKPTLTFCH
Trigger: GTGACAGAAAGTCAATGTCGGTTTACTGTACACCAAATAAACCAAGCAGGACATCAATGAGCAAGATGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR TCA 90 bp TCTACAATATCACCAGGAACTATGTCTTTAGCTTTAATCCGCTGCACACTCTTTAGTGCCCAATATTTATaGTCCAGACTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: STISPGTMSLALIRCTLFSAQYL*SRLQCK
Trigger: TTTGCATTGCAGTCTGGATCATAAATATTGGGCACT...AAAGAGTGTGCAGCGGATTAAAGCTAAAGACATAGTTCCTGGTGATATTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR GCA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACGGTTTATCATCTTTATaGACTTCTCCAATAGGTGCA +
Preference number: 4 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHGLSSL*TSPIGA
Trigger: TGCACCTATTGGAGAAGTGCATAAAGATGATAAACC...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR GCA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCTTACAACCGAAGGCATaGATTACAATTGAATACTGT +
Preference number: 4 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETLQPKA*ITIEYC
Trigger: ACAGTATTCAATTGTAATGCATGCCTTCGGTTGTAA...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTGTGAAAACTCTAGAGTaGATTCCTTTTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLVKTLE*IPFSSA
Trigger: AGCTGATGAAAAAGGAATTCACTCTAGAGTTTTCAC...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR TCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTAATGTACATCACAGATaGCAATTAGTGCCTGTACAT +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLNVHHR*QLVPVH
Trigger: ATGTACAGGCACTAATTGTCATCTGTGATGTACATT...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAACCGGGTCATTGAAGTaGCCAATATTTATGATCCAG +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLTGSLK*PIFMIQ
Trigger: CTGGATCATAAATATTGGGCACTTCAATGACCCGGT...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTATTTATGATCCAGACTaGAATGCAAATAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLIYDPD*NANKGD
Trigger: ATCTCCCTTATTTGCATTGCAGTCTGGATCATAAAT...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp CAGATTTTACAAAACACACACATACACACACATACACACTTGCCCTTATGTTCTTTACAACCGAAGGCATaGATTACAATTGAATACTGT +
Preference number: 4 (lower is better)
Translates to: QILQNTHIHTHTHLPLCSLQPKA*ITIEYC
Trigger: ACAGTATTCAATTGTAATGCATGCCTTCGGTTGTAA...AGAACATAAGGGCAAGTGTGTATGTGTGTGTATGTGTGTGTTTTGTAAAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR GCA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAATTTATGATCCAGACTaGAATGCAAATAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: ASQYLYCTNICLLLLISLIYDPD*NANKGD
Trigger: ATCTCCCTTATTTGCATTGCAGTCTGGATCATAAAT...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS TCA 90 bp GCTGGGAGCGCGGTCCACGCGGGGCGTCTCGAGGCGCCCTCGGGCTaGTGTCCTTGGCTCGCCTCCTCGCCCTCGGTCGCCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: AGSAVHAGRLEAPSG*CPWLASSPSVARAA
Trigger: CGCAGCCCGGGCGACCGAGGGCGAGGAGGCGAGCCAAGGACATCAGCCCGAGGGCGCCTCGAGACGCCCCGCGTGGACCGCGCTCCCAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552636.2
CDS CCA 90 bp CTCTGGGGCCGGTGGGCGGATGGTTGGAAGGCGAGGCCGAGGAGCTaGGAGCGCGGTCCACGCGGGGCGTCTCGAGGCGCCCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: LWGRWADGWKARPRS*ERGPRGASRGALGL
Trigger: CAGCCCGAGGGCGCCTCGAGACGCCCCGCGTGGACCGCGCTCCCAGCTCCTCGGCCTCGCCTTCCAACCATCCGCCCACCGGCCCCAGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552636.2
CDS GCA 90 bp GCCCGGGTCCCTCAGCGCCGCACGCCCGACAGCGGCGGAGGAAACTaGGGCGAAGGAAAAGGAGGTGGCGTCGGGGACGGCTCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: ARVPQRRTPDSGGGN*GEGKGGGVGDGSAA
Trigger: CGCCGCGGAGCCGTCCCCGACGCCACCTCCTTTTCCTTCGCCGCAGTTTCCTCCGCCGCTGTCGGGCGTGCGGCGCTGAGGGACCCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS CCA 90 bp GCATTTATCGGCCGCTGCCTCCCCTTTCGCCGCCGCCGCGGCATGTaGACGCCGCTCATTGGCCGAGAGCGCCCAGCGCGGCGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: AFIGRCLPFRRRRGM*TPLIGRERPARRGR
Trigger: CCGCCCGCGCCGCGCTGGGCGCTCTCGGCCAATGAGCGGCGTCCACATGCCGCGGCGGCGGCGAAAGGGGAGGCAGCGGCCGATAAATGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS CCA 90 bp AGTGGCCCAGCACCTCCTCCACCGTCTTGGTGTGCGCGTTCTCCATaGCTTCGGGGGCCCGGCCGGCCTCGCCTCCCGTCCCCGCGGCCT +
Preference number: 5 (lower is better)
Translates to: SGPAPPPPSWCARSP*LRGPGRPRLPSPRP
Trigger: AGGCCGCGGGGACGGGAGGCGAGGCCGGCCGGGCCCCCGAAGCCATGGAGAACGCGCACACCAAGACGGTGGAGGAGGTGCTGGGCCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS GCA 90 bp TCGTTGACGCCGAAGTGGCCCAGCACCTCCTCCACCGTCTTGGTGTaGGCGTTCTCCATGGCTTCGGGGGCCCGGCCGGCCTCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SLTPKWPSTSSTVLV*AFSMASGARPASPP
Trigger: GGGAGGCGAGGCCGGCCGGGCCCCCGAAGCCATGGAGAACGCGCACACCAAGACGGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAACGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS CCA 90 bp ACTCTGCAGACGCAGGGTGGGGCGCTCACAGTGGGCACGCTGCTCTaGGGCCGGTGGGCGGATGGTTGGAAGGCGAGGCCGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TLQTQGGALTVGTLL*GRWADGWKARPRSW
Trigger: CCAGCTCCTCGGCCTCGCCTTCCAACCATCCGCCCACCGGCCCCAGAGCAGCGTGCCCACTGTGAGCGCCCCACCCTGCGTCTGCAGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552636.2
CDS GCA 90 bp GGGGACGGCTCCGCGGCGGCTGCTCTAATAGCATTTATCGGCCGCTaGCTCCCCTTTCGCCGCCGCCGCGGCATGTGGACGCCGCTCATT +
Preference number: 5 (lower is better)
Translates to: GDGSAAAALIAFIGR*LPFRRRRGMWTPLI
Trigger: AATGAGCGGCGTCCACATGCCGCGGCGGCGGCGAAAGGGGAGGCAGCGGCCGATAAATGCTATTAGAGCAGCCGCCGCGGAGCCGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS CCA 90 bp CACGCCCGACAGCGGCGGAGGAAACTGCGGCGAAGGAAAAGGAGGTaGCGTCGGGGACGGCTCCGCGGCGGCTGCTCTAATAGCATTTAT +
Preference number: 5 (lower is better)
Translates to: HARQRRRKLRRRKRR*RRGRLRGGCSNSIY
Trigger: ATAAATGCTATTAGAGCAGCCGCCGCGGAGCCGTCCCCGACGCCACCTCCTTTTCCTTCGCCGCAGTTTCCTCCGCCGCTGTCGGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS CCA 90 bp TTGACCTGTTCCAGGCTCAGCCCCGTACTCTCGTTGACGCCGAAGTaGCCCAGCACCTCCTCCACCGTCTTGGTGTGCGCGTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: LTCSRLSPVLSLTPK*PSTSSTVLVCAFSM
Trigger: CATGGAGAACGCGCACACCAAGACGGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAACGAGAGTACGGGGCTGAGCCTGGAACAGGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCTCCAGATCAGGAGGGTaGAACCCCAGTGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFSRSGG*NPSAVA
Trigger: TGCCACTGCACTGGGGTTCAACCCTCCTGATCTGGA...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCAGGAGTAAGCTGGTTTTaGGGCTGTGCAGAGCCACGT +
Preference number: 5 (lower is better)
Translates to: TGWQQATLMAGPSATCPSGVSWF*GCAEPR
Trigger: ACGTGGCTCTGCACAGCCCAAAAACCAGCTTACTCC...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAAGGCTGCTCGCCTGCCTaGCCTAGCCCTGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: LRVGLQVPPPSLERGPSEGCSPA*PSPGEE
Trigger: TTCCTCTCCAGGGCTAGGCAAGGCAGGCGAGCAGCC...TTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS CCA 90 bp CTCAGCAAGGACTGGTTTTCGGACAAGCTGCAGAGCAAGGAGAGGTaGGGAAACGCACCCCCAAGGCAAGGCACGTGTCACAGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: LSKDWFSDKLQSKER*GNAPPRQGTCHSGS
Trigger: ACTGCCACTGTGACACGTGCCTTGCCTTGGGGGTGCGTTTCCCCACCTCTCCTTGCTCTGCAGCTTGTCCGAAAACCAGTCCTTGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS-3UTR CAA 90 bp TTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAATCCCCACTCCGGCTTTaGTCTGGCTTGGGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: LRVGLQVPPPSLERGPSESPLRL*SGLGPP
Trigger: AGGAGGGCCCAAGCCAGACAAAAGCCGGAGTGGGGA...TTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACATGTGGACGCCGCTCATaGGCCGAGAGCGCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTCGRRS*AESAQR
Trigger: GCGCTGGGCGCTCTCGGCCAATGAGCGGCGTCCACA...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS GCA 90 bp TCCAGGCTCCAACCCCATACCAAGCCTAGCACAGACCAGCCTGAATaGAGAGCCAGCCAAGAGGTTTACCCCAATTTCTCGGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SRLQPHTKPSTDQPE*RASQEVYPNFSEKP
Trigger: GGGCTTCTCCGAGAAATTGGGGTAAACCTCTTGGCTGGCTCTGCATTCAGGCTGGTCTGTGCTAGGCTTGGTATGGGGTTGGAGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547792.1
CDS-3UTR CAA 90 bp CTGCCTTGCCTAGCCCTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAGTAAAACCTCCTCCACCGTCTaGGTGTGCGCGTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: LPCLALERKLLRIILLSKTSSTV*VCAFSM
Trigger: CATGGAGAACGCGCACACCAAGACGGTGGAGGAGGT...TTTACTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp AGCACCATCAGCCACTGGGTCACGTTCAGCGGTGTGATCTGGAAGATGAGTGGCGGTAGAAGGACACTCTaGGACCACCGTCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: STISHWVTFSGVIWKMSGGRRTL*DHRQQQ
Trigger: TTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTACC...GCCACTCATCTTCCAGATCACACCGCTGAACGTGACCCAGTGGCTGATGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp AGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCTTTTCGGACAAGCTGTaGAGGGCGTTACACATTTCT +
Preference number: 5 (lower is better)
Translates to: RGQGRHGVATSDTDGWAFFSDKL*RALHIS
Trigger: AGAAATGTGTAACGCCCTCAACAGCTTGTCCGAAAA...GAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp TGGGTGCACCTGTCAATGACACCTTCAGGAGCACCCTTCACAAACATCTTGCTCACCTCCTCCACCGTCTaGGTGTGCGCGTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: WVHLSMTPSGAPFTNILLTSSTV*VCAFSM
Trigger: CATGGAGAACGCGCACACCAAGACGGTGGAGGAGGT...GAGCAAGATGTTTGTGAAGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCATCCTGTCGATACACTTaGCCCATTTCAGGCTCATAT +
Preference number: 5 (lower is better)
Translates to: TGWQQATLMAGPSATCPSSCRYT*PISGSY
Trigger: ATATGAGCCTGAAATGGGCAAAGTGTATCGACAGGA...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCATCCCAGCAGCAATGTTaGTACCAGAAAACAGCATGT +
Preference number: 5 (lower is better)
Translates to: TGWQQATLMAGPSATCPSSQQQC*YQKTAC
Trigger: ACATGCTGTTTTCTGGTACAAACATTGCTGCTGGGA...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp ACGGGGTGGCAACAAGCGACACTGATGGCTGGGCCTTCAGCCACCTGCCCATCAGACATGATCTTCTGTTaGACTCCAGAGGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: TGWQQATLMAGPSATCPSDMIFC*TPEVIG
Trigger: TCCTATGACCTCTGGAGTCAAACAGAAGATCATGTC...TGATGGGCAGGTGGCTGAAGGCCCAGCCATCAGTGTCGCTTGTTGCCACCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACACGCTGGGCGGAGGGGTaGAGTTCATCAAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: LSCLMPPNPPQTPTICITRWAEG*SSSNSR
Trigger: CCGGGAGTTTGATGAACTCAACCCCTCCGCCCAGCG...TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCGGGTTGGTAGATGTGTaGCTAAAAACGCACATGCAC +
Preference number: 5 (lower is better)
Translates to: VGLQVPPPSLERGPSELSGLVDV*LKTHMH
Trigger: GTGCATGTGCGTTTTTAGCAACACATCTACCAACCC...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp GTCAGCAGCAATGAACCACCATGCAGCAGCACCCACGGTAGCAGCGCCGACGTATCCCAGCAGCAATGTTaGTACCAGAAAACAGCATGT +
Preference number: 5 (lower is better)
Translates to: VSSNEPPCSSTHGSSADVSQQQC*YQKTAC
Trigger: ACATGCTGTTTTCTGGTACAAACATTGCTGCTGGGA...TACGTCGGCGCTGCTACCGTGGGTGCTGCTGCATGGTGGTTCATTGCTGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACGACCCGGATGCCTGCTaGCCGGCACAGCTTCACGGA +
Preference number: 5 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYDPDAC*PAQLHG
Trigger: TCCGTGAAGCTGTGCCGGCAAGCAGGCATCCGGGTC...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GTCAGCAGCAATGAACCACCATGCAGCAGCACCCACGGTAGCAGCGCCGACGTAAGAGCCTCATTCCTCTaGCAGCAAAGAAACCAAACT +
Preference number: 5 (lower is better)
Translates to: VSSNEPPCSSTHGSSADVRASFL*QQRNQT
Trigger: AGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCT...TACGTCGGCGCTGCTACCGTGGGTGCTGCTGCATGGTGGTTCATTGCTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCATACAGTTATCTCACTaGGTGGCAGTCACCTTTAGG +
Preference number: 5 (lower is better)
Translates to: VGLQVPPPSLERGPSELSIQLSH*VAVTFR
Trigger: CCTAAAGGTGACTGCCACCAAGTGAGATAACTGTAT...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGCGGCTTTTGTCTGGCTaGGGCCCTCCTGGTCATCTT +
Preference number: 5 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVRLLSG*GPPGHL
Trigger: AAGATGACCAGGAGGGCCCAAGCCAGACAAAAGCCG...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp CAAGAGGACAAGGTCTTGGTTAGTGGTGCAGAGGGTGAGGTTGATGGAGAAGTGGTTGCCCAGGCTGGTTaGAGTACCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: QEDKVLVSGAEGEVDGEVVAQAG*STWAQA
Trigger: TGCTTGAGCCCAGGTACTCAAACCAGCCTGGGCAAC...CACTTCTCCATCAACCTCACCCTCTGCACCACTAACCAAGACCTTGTCCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS CCA 90 bp ACAGAAAGAAAGGTGACTGAGTACCAGCTGGTAGAAGGACACTCTTaGACCACCGTCAGCAGCAATGAACCACCATGCAGCAGCACCCAC +
Preference number: 5 (lower is better)
Translates to: TERKVTEYQLVEGHS*TTVSSNEPPCSSTH
Trigger: GTGGGTGCTGCTGCATGGTGGTTCATTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTACCAGCTGGTACTCAGTCACCTTTCTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547792.1
CDS-3UTR CAA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGAGCCCCGTACTCTCGTaGACGCCGAAGTGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMSPVLS*TPKWPS
Trigger: GCTGGGCCACTTCGGCGTCAACGAGAGTACGGGGCT...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGTCAGCCGGTAACTCGTaGGAGCCCCATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVSAGNS*EPHLSL
Trigger: TAAGGAGAGATGGGGCTCCAACGAGTTACCGGCTGA...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTCGCTGGGCGGAGGGGTaGAGTTCATCAAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGRWAEG*SSSNSR
Trigger: CCGGGAGTTTGATGAACTCAACCCCTCCGCCCAGCG...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACATTCCACCTCCATCCCTaGAACGTGGGCCCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: LSCLMPPNPPQTPTICITFHLHP*NVGPLN
Trigger: GTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAA...TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS TCA 90 bp TGTCACGGGCTTAACTGGATGGTACCATTTGTCTGTGTGAAAGGGTaGGGTTCCTTCCCTGTGGGTGCTGGCATACAGGGGTACCAAAGT +
Preference number: 5 (lower is better)
Translates to: CHGLNWMVPFVCVKG*GSFPVGAGIQGYQS
Trigger: ACTTTGGTACCCCTGTATGCCAGCACCCACAGGGAAGGAACCTCACCCTTTCACACAGACAAATGGTACCATCCAGTTAAGCCCGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS-3UTR CAA 90 bp CTGGGCAAAGCTCAGAGAGGCCAAGGGAGGCACGGGGTGGCAACAAGCGACACTACACCCACAATTGCATaGGCTACTAATATGAGTAAA +
Preference number: 5 (lower is better)
Translates to: LGKAQRGQGRHGVATSDTTPTIA*ATNMSK
Trigger: TTTACTCATATTAGTAGCCAATGCAATTGTGGGTGT...AGTGTCGCTTGTTGCCACCCCGTGCCTCCCTTGGCCTCTCTGAGCTTTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCGACCCGGATGCCTGCTaGCCGGCACAGCTTCACGGA +
Preference number: 5 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETDPDAC*PAQLHG
Trigger: TCCGTGAAGCTGTGCCGGCAAGCAGGCATCCGGGTC...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTATGACCCGGATGCCTGCTaGCCGGCACAGCTTCACGGA +
Preference number: 5 (lower is better)
Translates to: TEHPYISAKWFRKRLLQYDPDAC*PAQLHG
Trigger: TCCGTGAAGCTGTGCCGGCAAGCAGGCATCCGGGTC...ATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACATCCAGATCAGGAGGGTaGAACCCCAGTGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTSRSGG*NPSAVA
Trigger: TGCCACTGCACTGGGGTTCAACCCTCCTGATCTGGA...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCGAACAGAGAGCGCCATaGTCATCGGGTATGGGGATT +
Preference number: 5 (lower is better)
Translates to: CLVDTELILWSQVLGLPTEQRAP*SSGMGI
Trigger: AATCCCCATACCCGATGACAATGGCGCTCTCTGTTC...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGAGCACTCAAGTCAGTTaGCAGCCCAGAGATGCACTC +
Preference number: 5 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVSTQVS*QPRDAL
Trigger: GAGTGCATCTCTGGGCTGCAAACTGACTTGAGTGCT...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAAAACTGCAGCGGGTGTTaGGACAATTTGGTGGTTACA +
Preference number: 5 (lower is better)
Translates to: LRVGLQVPPPSLERGPSENCSGC*DNLVVT
Trigger: TGTAACCACCAAATTGTCCAAACACCCGCTGCAGTT...TTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp CTCACAGGCACTGCAGACGTGGTATGCTCTGGCCCTGGACAGTGGCTAGATGCTATATCAGCAGGAACTTaGTCACCAACAGCAATTTCT +
Preference number: 5 (lower is better)
Translates to: LTGTADVVCSGPGQWLDAISAGT*SPTAIS
Trigger: AGAAATTGCTGTTGGTGACAAAGTTCCTGCTGATAT...AGCATCTAGCCACTGTCCAGGGCCAGAGCATACCACGTCTGCAGTGCCTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp AGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGTTCTCTCCTGTTCTGTaGCCACCATTTCATCCCGGA +
Preference number: 5 (lower is better)
Translates to: SSRDSFLQNGSSAFCRVVFSPVL*PPFHPG
Trigger: TCCGGGATGAAATGGTGGCAACAGAACAGGAGAGAA...CACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp GTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACGTGGGCCCTCTGAACTCAGCCCAACGAAGGTCAGATaGGTCTCATATTTAATAAAG +
Preference number: 5 (lower is better)
Translates to: VGLQVPPPSLERGPSELSPTKVR*VSYLIK
Trigger: CTTTATTAAATATGAGACCAATCTGACCTTCGTTGG...GCTGAGTTCAGAGGGCCCACGTTCAAGGGATGGAGGTGGAACCTGGAGACCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAACGCTGGGCGGAGGGGTaGAGTTCATCAAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: YLPETMSVRRSLLPAQKERWAEG*SSSNSR
Trigger: CCGGGAGTTTGATGAACTCAACCCCTCCGCCCAGCG...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTCCAGATCAGGAGGGTaGAACCCCAGTGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGSRSGG*NPSAVA
Trigger: TGCCACTGCACTGGGGTTCAACCCTCCTGATCTGGA...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACAGGTAGAAGGACACTCTaGGACCACCGTCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTGRRTL*DHRQQQ
Trigger: TTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTACC...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS CCA 90 bp AGTAAGACCCTGTTGGACTACACTTCAGTAAGGCGGCTGTTAATGTaGCACCATCCGCTGACCTACCTCCACTTTCTACAGTGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: SKTLLDYTSVRRLLM*HHPLTYLHFLQWQS
Trigger: ACTTTGCCACTGTAGAAAGTGGAGGTAGGTCAGCGGATGGTGCCACATTAACAGCCGCCTTACTGAAGTGTAGTCCAACAGGGTCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCACCTCCTCCACCGTCTaGGTGTGCGCGTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTTSSTV*VCAFSM
Trigger: CATGGAGAACGCGCACACCAAGACGGTGGAGGAGGT...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TGGGTGCACCTGTCAATGACACCTTCAGGAGCACCCTTCACAAACATCTTGCTCACGGGATCAGTGTGCTaGATGACAGAGACAGATTCA +
Preference number: 5 (lower is better)
Translates to: WVHLSMTPSGAPFTNILLTGSVC*MTETDS
Trigger: TGAATCTGTCTCTGTCATCAAGCACACTGATCCCGT...GAGCAAGATGTTTGTGAAGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp AGATTGCACAATCCACGCCTTCAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAGAACAGAGAGCGCCATaGTCATCGGGTATGGGGATT +
Preference number: 5 (lower is better)
Translates to: RLHNPRLQSPGCPLYTVGEQRAP*SSGMGI
Trigger: AATCCCCATACCCGATGACAATGGCGCTCTCTGTTC...TCCTACAGTGTAAAGAGGACAACCCGGACTTTGAAGGCGTGGATTGTGCAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACAGCGGTTACTCCAGTATaGCAGGTTCCAGGTAGTTGC +
Preference number: 5 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTAVTPV*QVPGSC
Trigger: GCAACTACCTGGAACCTGCAATACTGGAGTAACCGC...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS-3UTR CAA 90 bp TGCTTGGTAGACACTGAGCTAATCTTGTGGTCTCAGGTCTTAGGTCTGCCCACCATGCACTCCTTGCATTaGGCCCATTCAACCCATTTC +
Preference number: 5 (lower is better)
Translates to: CLVDTELILWSQVLGLPTMHSLH*AHSTHF
Trigger: GAAATGGGTTGAATGGGCCAAATGCAAGGAGTGCAT...GGTGGGCAGACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTCTACCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATCTCTCCTTAAGCTTCTaGACCTGTTCCAGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHLSLSF*TCSRLS
Trigger: GCTGAGCCTGGAACAGGTCAAGAAGCTTAAGGAGAG...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGGGTAGAAGGACACTCTaGGACCACCGTCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: KTHMHATEHPYISAKWFRGRRTL*DHRQQQ
Trigger: TTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTACC...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGGAGAAATGTGGCGACTaGGCTGACGGCTTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: THMHATEHPYISAKWFRKEKCGD*ADGFQV
Trigger: AACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTC...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CCAGTTGCTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACCAGAAGAACTGGAGAGAAAGTaGGACATGTCTGTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: PVATTTPIAFPAAMFVPEELERK*DMSVSP
Trigger: GGGACTAACAGACATGTCCAACTTTCTCTCCAGTTC...TTCTGGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAGCACCTTGTCCTGCTaGATGCCTCCTAACCCTCCC +
Preference number: 5 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETSTLSC*MPPNPP
Trigger: GGGAGGGTTAGGAGGCATCAAGCAGGACAAGGTGCT...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCTCCCTGCACCTACCGTaGGAGCCCCATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTSLHLP*EPHLSL
Trigger: TAAGGAGAGATGGGGCTCCAACGGTAGGTGCAGGGA...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS TCA 90 bp AGCAGTGGCACCAAAGACACAACAACCCACACAAAATCCAAGTTATaGGGACTCCCGGTCAGCAAAAGGTCAGTTCCAGAGACAAGTTAC +
Preference number: 5 (lower is better)
Translates to: SSGTKDTTTHTKSKL*GLPVSKRSVPETSY
Trigger: GTAACTTGTCTCTGGAACTGACCTTTTGCTGACCGGGAGTCCTCATAACTTGGATTTTGTGTGGGTTGTTGTGTCTTTGGTGCCACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS-3UTR CAA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCTCCTTAAGCTTCTaGACCTGTTCCAGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: MHATEHPYISAKWFRKRLLSLSF*TCSRLS
Trigger: GCTGAGCCTGGAACAGGTCAAGAAGCTTAAGGAGAG...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACTCTCCTTAAGCTTCTaGACCTGTTCCAGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGLSLSF*TCSRLS
Trigger: GCTGAGCCTGGAACAGGTCAAGAAGCTTAAGGAGAG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCTCAGCCGGTAACTCGTaGGAGCCCCATCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTSAGNS*EPHLSL
Trigger: TAAGGAGAGATGGGGCTCCAACGAGTTACCGGCTGA...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACATTCTTTTTATCTTGGTaGACAGCTCGTGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTFFLSW*TARGSG
Trigger: CCCTGACCCACGAGCTGTCAACCAAGATAAAAAGAA...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TGGGTGCACCTGTCAATGACACCTTCAGGAGCACCCTTCACAAACATCTTGCTCTCCTGCTTGGTTTATTaGGTGTACAGTAAACCGACA +
Preference number: 5 (lower is better)
Translates to: WVHLSMTPSGAPFTNILLSCLVY*VYSKPT
Trigger: TGTCGGTTTACTGTACACCAAATAAACCAAGCAGGA...GAGCAAGATGTTTGTGAAGGGTGCTCCTGAAGGTGTCATTGACAGGTGCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp CCACGGACTGTGCTTTTAAGAGTCGGTCTCCAGGTTCCACCTCCATCCCTTGAACAAACATCTTGCTCATaGATGTCCTGCTTGGTTTAT +
Preference number: 5 (lower is better)
Translates to: PRTVLLRVGLQVPPPSLEQTSCS*MSCLVY
Trigger: ATAAACCAAGCAGGACATCAATGAGCAAGATGTTTG...TTCAAGGGATGGAGGTGGAACCTGGAGACCGACTCTTAAAAGCACAGTCCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGAACAGAGAGCGCCATaGTCATCGGGTATGGGGATT +
Preference number: 5 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMEQRAP*SSGMGI
Trigger: AATCCCCATACCCGATGACAATGGCGCTCTCTGTTC...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTGTCCTGCTTGATGCCTCCTAACCCTCCCCAAACTCCAACCATCTGCATTACACAGTCATGCACAGGGTaGGTAGATGTGTTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: LSCLMPPNPPQTPTICITQSCTG*VDVLLK
Trigger: TTTTAGCAACACATCTACCAACCCTGTGCATGACTG...TGTAATGCAGATGGTTGGAGTTTGGGGAGGGTTAGGAGGCATCAAGCAGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGAACATGCGCAAACATaGATCGTAGTAACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSEHAQT*IVVTVV
Trigger: CACCACCGTTACTACGATCAATGTTTGCGCATGTTC...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAAGAACTCAGCAGCACCTaGTCCTGCTTGATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEELSST*SCLMPP
Trigger: AGGAGGCATCAAGCAGGACAAGGTGCTGCTGAGTTC...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp CTGCCTTGCCTAGCCCTGGAGAGGAAACTCCTCCGCATCATTCTCCTCAGTAAAAAAGCTGAGTTTTGTTaGCACGGAATAGCAATAGTG +
Preference number: 5 (lower is better)
Translates to: LPCLALERKLLRIILLSKKAEFC*HGIAIV
Trigger: CACTATTGCTATTCCGTGCAAACAAAACTCAGCTTT...TTTACTGAGGAGAATGATGCGGAGGAGTTTCCTCTCCAGGGCTAGGCAAGGCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTACGGGATCAGTGTGCTaGATGACAGAGACAGATTCA +
Preference number: 5 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGTGSVC*MTETDS
Trigger: TGAATCTGTCTCTGTCATCAAGCACACTGATCCCGT...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTTCTTTTTATCTTGGTaGACAGCTCGTGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYFFLSW*TARGSG
Trigger: CCCTGACCCACGAGCTGTCAACCAAGATAAAAAGAA...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CACCCGCTGATCAATGGTTCCTTTGGGTTCCGGGGAGGTTTATTCATGATGTCCTCATTGATGTCCTGCTaGGTTTATTTGGTGTACAGT +
Preference number: 5 (lower is better)
Translates to: HPLINGSFGFRGGLFMMSSLMSC*VYLVYS
Trigger: ACTGTACACCAAATAAACCAAGCAGGACATCAATGA...GGACATCATGAATAAACCTCCCCGGAACCCAAAGGAACCATTGATCAGCGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCCCCTTCACAAACATCTaGCTCATTGATGTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSPFTNI*LIDVLL
Trigger: AAGCAGGACATCAATGAGCAAGATGTTTGTGAAGGG...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCTCTACGATTTTAGACTaGTGGGAGGGTTCAACTCGA +
Preference number: 5 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSSTILD*WEGSTR
Trigger: TCGAGTTGAACCCTCCCACAAGTCTAAAATCGTAGA...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGATGGGGATTCAAAGATaGCACAATCCACGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRMGIQR*HNPRLQ
Trigger: TTGAAGGCGTGGATTGTGCAATCTTTGAATCCCCAT...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGCAGTCATGCACAGGGTaGGTAGATGTGTTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRQSCTG*VDVLLK
Trigger: TTTTAGCAACACATCTACCAACCCTGTGCATGACTG...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCGAGAAATGTGGCGACTaGGCTGACGGCTTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETEKCGD*ADGFQV
Trigger: AACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTC...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGTCTGTGCGACGCTCATaGTTACCAGCACAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: THMHATEHPYISAKWFRKSVRRS*LPAQKE
Trigger: TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGA...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGTCTGTGCGACGCTCATaGTTACCAGCACAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: ISYDILQRNVATWLTASKSVRRS*LPAQKE
Trigger: TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGA...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CCAGTTGCTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACCAGAACAGGCCAGCAGAAACTaGCATAAAATGTACATCACA +
Preference number: 5 (lower is better)
Translates to: PVATTTPIAFPAAMFVPEQASRN*HKMYIT
Trigger: TGTGATGTACATTTTATGCAAGTTTCTGCTGGCCTG...TTCTGGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGAGCTCCTTCAGCCTGTaGGTCTGGCTGAAATGCCTC +
Preference number: 5 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRSSFSL*VWLKCL
Trigger: GAGGCATTTCAGCCAGACCAACAGGCTGAAGGAGCT...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp GCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGGACACTGAGCTAATCTaGTGGTCTCAGGTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: ATEHPYISAKWFRKRLLQDTELI*WSQVLG
Trigger: ACCTAAGACCTGAGACCACAAGATTAGCTCAGTGTC...CTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS TCA 90 bp TGGCACCATCCGCTGACCTACCTCCACTTTCTACAGTGGCAAAGTTaGAGAGAATGTCCTAATGCAGGACAAACTGTGAATTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: WHHPLTYLHFLQWQS*RECPNAGQTVNSVS
Trigger: AGATACAGAATTCACAGTTTGTCCTGCATTAGGACATTCTCTTCAACTTTGCCACTGTAGAAAGTGGAGGTAGGTCAGCGGATGGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS GCA 90 bp TGGCATAGCAGACCCCATCTTAGTGGGTTCAAAGCTGTTCCCAATTaGCCTGGAGACTTGGGCTATTTAGAAATTTCCATTTTTGTCACG +
Preference number: 5 (lower is better)
Translates to: WHSRPHLSGFKAVPN*PGDLGYLEISIFVT
Trigger: CGTGACAAAAATGGAAATTTCTAAATAGCCCAAGTCTCCAGGGCAATTGGGAACAGCTTTGAACCCACTAAGATGGGGTCTGCTATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS GCA 90 bp CAGGATGAAAATCTTCCTAAGTCAAGGGCAGTTATGCAATACCACTaGAAGAAGCCTCCTGCAGAATACCAATTAGCACCAGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: QDENLPKSRAVMQYH*KKPPAEYQLAPASC
Trigger: ACAGGAAGCTGGTGCTAATTGGTATTCTGCAGGAGGCTTCTTGCAGTGGTATTGCATAACTGCCCTTGACTTAGGAAGATTTTCATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS CCA 90 bp TGCAGAGCCAGCCAAGAGGTTTACCCCAATTTCTCGGAGAAGCCCTaGTCCTTCAGAATCATCTTAGATGTAACTGTTTATTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: CRASQEVYPNFSEKP*SFRIILDVTVYCLS
Trigger: ACTCAGACAATAAACAGTTACATCTAAGATGATTCTGAAGGACCAGGGCTTCTCCGAGAAATTGGGGTAAACCTCTTGGCTGGCTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547792.1
CDS-3UTR CAA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGATTTCATCCCGGATCTaGCCAATTTCGGTGTTAACT +
Preference number: 5 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRISSRI*PISVLT
Trigger: AGTTAACACCGAAATTGGCAAGATCCGGGATGAAAT...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp ATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACAATGGCATTTTTCTTaGCCATTCTGCGAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: MHRVGRCVAKNAHARNRTQWHFS*PFCEFQ
Trigger: TTGGAACTCGCAGAATGGCAAAGAAAAATGCCATTG...TGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGGTAAGTGTACCAGTCTaGTCTGAGCAGATAACAGAA +
Preference number: 5 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRVSVPV*SEQITE
Trigger: TTCTGTTATCTGCTCAGACAAGACTGGTACACTTAC...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp CACCCGCTGATCAATGGTTCCTTTGGGTTCCGGGGAGGTTTATTCATGATGTCCAAAGAGCACAAATTGTaGCTAATTCTACCAGACCAT +
Preference number: 5 (lower is better)
Translates to: HPLINGSFGFRGGLFMMSKEHKL*LILPDH
Trigger: ATGGTCTGGTAGAATTAGCAACAATTTGTGCTCTTT...GGACATCATGAATAAACCTCCCCGGAACCCAAAGGAACCATTGATCAGCGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGTCTACGATTTTAGACTaGTGGGAGGGTTCAACTCGA +
Preference number: 5 (lower is better)
Translates to: THMHATEHPYISAKWFRKSTILD*WEGSTR
Trigger: TCGAGTTGAACCCTCCCACAAGTCTAAAATCGTAGA...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGTATCCTTCAAAGTCCGGGTaGTCCTCTTTACACTGTAGG +
Preference number: 5 (lower is better)
Translates to: TEHPYISAKWFRKRLLQYPSKSG*SSLHCR
Trigger: CCTACAGTGTAAAGAGGACAACCCGGACTTTGAAGG...ATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGGGGTTGGTAGATGTGTaGCTAAAAACGCACATGCAC +
Preference number: 5 (lower is better)
Translates to: KTHMHATEHPYISAKWFRGLVDV*LKTHMH
Trigger: GTGCATGTGCGTTTTTAGCAACACATCTACCAACCC...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGAGCCTCATTCCTCTaGCAGCAAAGAAACCAAACT +
Preference number: 5 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSRASFL*QQRNQT
Trigger: AGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCT...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CCAGTTGCTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACCAGAAATAAGCTATGACATTTaGCAGAGAAATGTGGCGACT +
Preference number: 5 (lower is better)
Translates to: PVATTTPIAFPAAMFVPEISYDI*QRNVAT
Trigger: AGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT...TTCTGGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGCACACACATACACACTaGCCCTTATGTTCTCTATAC +
Preference number: 5 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRHTHTH*PLCSLY
Trigger: GTATAGAGAACATAAGGGCAAGTGTGTATGTGTGTG...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCGGGTGTTTGGACAATTaGGTGGTTACAGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETGCLDN*VVTVTG
Trigger: CCCTGTGACTGTAACCACCAAATTGTCCAAACACCC...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS TCA 90 bp CAAGAAGCCTCCTGCAGAATACCAATTAGCACCAGCTTCCTGTTGTaGGGTAGAGCTTCACTCAGAACAGGCAGGCTTTTTCTTTATTAT +
Preference number: 5 (lower is better)
Translates to: QEASCRIPISTSFLL*GRASLRTGRLFLYY
Trigger: ATAATAAAGAAAAAGCCTGCCTGTTCTGAGTGAAGCTCTACCTCACAACAGGAAGCTGGTGCTAATTGGTATTCTGCAGGAGGCTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS TCA 90 bp CAATCGAACAGTATGAAAAACAGCATCACTGAGGTGCTGAATGAATaGGCAGCAGTGGCACCAAAGACACAACAACCCACACAAAATCCA +
Preference number: 5 (lower is better)
Translates to: QSNSMKNSITEVLNE*AAVAPKTQQPTQNP
Trigger: TGGATTTTGTGTGGGTTGTTGTGTCTTTGGTGCCACTGCTGCTCATTCATTCAGCACCTCAGTGATGCTGTTTTTCATACTGTTCGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS GCA 90 bp TCAGCAGTACTGTCCCTTACCCTAACTAGCTTAATTATATTAGACTaGTTCGCCCATCACACCCCCGACCAATCGAACAGTATGAAAAAC +
Preference number: 5 (lower is better)
Translates to: SAVLSLTLTSLIILD*FAHHTPDQSNSMKN
Trigger: GTTTTTCATACTGTTCGATTGGTCGGGGGTGTGATGGGCGAAGCAGTCTAATATAATTAAGCTAGTTAGGGTAAGGGACAGTACTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS-3UTR CAA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAATTCTTTTTATCTTGGTaGACAGCTCGTGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEFFLSW*TARGSG
Trigger: CCCTGACCCACGAGCTGTCAACCAAGATAAAAAGAA...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGTCCCAGCAGCAATGTTaGTACCAGAAAACAGCATGT +
Preference number: 5 (lower is better)
Translates to: KTHMHATEHPYISAKWFRSQQQC*YQKTAC
Trigger: ACATGCTGTTTTCTGGTACAAACATTGCTGCTGGGA...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACTTCTCTCCTGTTCTGTaGCCACCATTTCATCCCGGA +
Preference number: 5 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHFSPVL*PPFHPG
Trigger: TCCGGGATGAAATGGTGGCAACAGAACAGGAGAGAA...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAATGGCATTTTTCTTaGCCATTCTGCGAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: HATEHPYISAKWFRKRLLQWHFS*PFCEFQ
Trigger: TTGGAACTCGCAGAATGGCAAAGAAAAATGCCATTG...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATTCCTGCTTGGTTTATTaGGTGTACAGTAAACCGACA +
Preference number: 5 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHSCLVY*VYSKPT
Trigger: TGTCGGTTTACTGTACACCAAATAAACCAAGCAGGA...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTCCTGCTTGGTTTATTaGGTGTACAGTAAACCGACA +
Preference number: 5 (lower is better)
Translates to: TCTQPNTLTFLQNGLGSGSCLVY*VYSKPT
Trigger: TGTCGGTTTACTGTACACCAAATAAACCAAGCAGGA...ACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTAGACATGATCTTCTGTTaGACTCCAGAGGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: MHATEHPYISAKWFRKRLDMIFC*TPEVIG
Trigger: TCCTATGACCTCTGGAGTCAAACAGAAGATCATGTC...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CCAGTTGCTACCACCACTCCCATAGCTTTCCCAGCAGCAATGTTTGTACCAGAACCAACGAAGGTCAGATaGGTCTCATATTTAATAAAG +
Preference number: 5 (lower is better)
Translates to: PVATTTPIAFPAAMFVPEPTKVR*VSYLIK
Trigger: CTTTATTAAATATGAGACCAATCTGACCTTCGTTGG...TTCTGGTACAAACATTGCTGCTGGGAAAGCTATGGGAGTGGTGGTAGCAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGATGGGGATTCAAAGATaGCACAATCCACGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMMGIQR*HNPRLQ
Trigger: TTGAAGGCGTGGATTGTGCAATCTTTGAATCCCCAT...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAATGGGGATTCAAAGATaGCACAATCCACGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGMGIQR*HNPRLQ
Trigger: TTGAAGGCGTGGATTGTGCAATCTTTGAATCCCCAT...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGACAGTCATGCACAGGGTaGGTAGATGTGTTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: KRTCTQPNTLTFLQNGLGQSCTG*VDVLLK
Trigger: TTTTAGCAACACATCTACCAACCCTGTGCATGACTG...TCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCATAAGCTATGACATTTaGCAGAGAAATGTGGCGACT +
Preference number: 5 (lower is better)
Translates to: RTCTQPNTLTFLQNGLGSISYDI*QRNVAT
Trigger: AGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT...GCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TCCAAGTTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCGAACTGGAGAGAAAGTaGGACATGTCTGTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: SKFLDKVTEPHSSCSKETELERK*DMSVSP
Trigger: GGGACTAACAGACATGTCCAACTTTCTCTCCAGTTC...GGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAACTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCAGGCCAGCAGAAACTaGCATAAAATGTACATCACA +
Preference number: 5 (lower is better)
Translates to: THMHATEHPYISAKWFRKQASRN*HKMYIT
Trigger: TGTGATGTACATTTTATGCAAGTTTCTGCTGGCCTG...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCCACACACATACACACTaGCCCTTATGTTCTCTATAC +
Preference number: 5 (lower is better)
Translates to: TQPNTLTFLQNGLGSGYSHTHTH*PLCSLY
Trigger: GTATAGAGAACATAAGGGCAAGTGTGTATGTGTGTG...GGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGCATTCAACCCATTTCTaGTTACACCTCATGATGCTC +
Preference number: 5 (lower is better)
Translates to: ATEHPYISAKWFRKRLLQHSTHF*LHLMML
Trigger: GAGCATCATGAGGTGTAACAAGAAATGGGTTGAATG...CTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTAATTTCATCCCGGATCTaGCCAATTTCGGTGTTAACT +
Preference number: 5 (lower is better)
Translates to: MHATEHPYISAKWFRKRLISSRI*PISVLT
Trigger: AGTTAACACCGAAATTGGCAAGATCCGGGATGAAAT...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTTCTCTCCTGTTCTGTaGCCACCATTTCATCCCGGA +
Preference number: 5 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLFSPVL*PPFHPG
Trigger: TCCGGGATGAAATGGTGGCAACAGAACAGGAGAGAA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGTAAGTGTACCAGTCTaGTCTGAGCAGATAACAGAA +
Preference number: 5 (lower is better)
Translates to: VDVLLKTHMHATEHPYISVSVPV*SEQITE
Trigger: TTCTGTTATCTGCTCAGACAAGACTGGTACACTTAC...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CAAAGTCCGGGTTGTCCTCTTTACACTGTAGGAAATGACTCAGCTGGTAGAAGGTACAAAGAGCACAAATaGTTGCTAATTCTACCAGAC +
Preference number: 5 (lower is better)
Translates to: QSPGCPLYTVGNDSAGRRYKEHK*LLILPD
Trigger: GTCTGGTAGAATTAGCAACAATTTGTGCTCTTTGTA...CCTTCTACCAGCTGAGTCATTTCCTACAGTGTAAAGAGGACAACCCGGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS-3UTR CAA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGTGTTTAATGACTGAGTaGCAGGCATTTGCACGTTCT +
Preference number: 5 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMCLMTE*QAFARS
Trigger: AGAACGTGCAAATGCCTGCAACTCAGTCATTAAACA...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGTCATTGATGTCCTGCTaGGTTTATTTGGTGTACAGT +
Preference number: 5 (lower is better)
Translates to: THMHATEHPYISAKWFRKSLMSC*VYLVYS
Trigger: ACTGTACACCAAATAAACCAAGCAGGACATCAATGA...CTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATTCATTGATGTCCTGCTaGGTTTATTTGGTGTACAGT +
Preference number: 5 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHSLMSC*VYLVYS
Trigger: ACTGTACACCAAATAAACCAAGCAGGACATCAATGA...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ATAAGCTATGACATTTTGCAGAGAAATGTGGCGACTTGGCTGACGGCTTCCAAGCAAACATCTTGCTCATaGATGTCCTGCTTGGTTTAT +
Preference number: 5 (lower is better)
Translates to: ISYDILQRNVATWLTASKQTSCS*MSCLVY
Trigger: ATAAACCAAGCAGGACATCAATGAGCAAGATGTTTG...CTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCTCATATTTAATAAAGTaGGCAGAGTCCTCAAGGTGC +
Preference number: 5 (lower is better)
Translates to: HATEHPYISAKWFRKRLLSYLIK*AESSRC
Trigger: GCACCTTGAGGACTCTGCCAACTTTATTAAATATGA...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCTCTACGATTTTAGACTaGTGGGAGGGTTCAACTCGA +
Preference number: 5 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTSTILD*WEGSTR
Trigger: TCGAGTTGAACCCTCCCACAAGTCTAAAATCGTAGA...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTCCTTCAAAGTCCGGGTaGTCCTCTTTACACTGTAGG +
Preference number: 5 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLPSKSG*SSLHCR
Trigger: CCTACAGTGTAAAGAGGACAACCCGGACTTTGAAGG...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCTTTTCGGACAAGCTGTaGAGGGCGTTACACATTTCT +
Preference number: 5 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTFSDKL*RALHIS
Trigger: AGAAATGTGTAACGCCCTCAACAGCTTGTCCGAAAA...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAAAGAGCCTCATTCCTCTaGCAGCAAAGAAACCAAACT +
Preference number: 5 (lower is better)
Translates to: YLPETMSVRRSLLPAQKERASFL*QQRNQT
Trigger: AGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCT...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGGAACATGCGCAAACATaGATCGTAGTAACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKREHAQT*IVVTVV
Trigger: CACCACCGTTACTACGATCAATGTTTGCGCATGTTC...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACCACTGGTTCAGTTACTaGCTTTCACTAGTTTTTAGC +
Preference number: 5 (lower is better)
Translates to: CTQPNTLTFLQNGLGSGYHWFSY*LSLVFS
Trigger: GCTAAAAACTAGTGAAAGCAAGTAACTGAACCAGTG...GTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGAGCCTAAGTACATTTaGAAGAATATAGTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: VDVLLKTHMHATEHPYISEPKYI*KNIVEA
Trigger: GGCCTCGACTATATTCTTCAAAATGTACTTAGGCTC...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS CCA 90 bp CTGGAGAAACCTAAGACAAACCTAGAAGCTTTCCACTTTGAAAGTTaGAACACCCCAGTTCTGTCAATTCTAAATGTGGGTTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: LEKPKTNLEAFHFES*NTPVLSILNVGLDF
Trigger: GAAGTCCAAACCCACATTTAGAATTGACAGAACTGGGGTGTTCCAACTTTCAAAGTGGAAAGCTTCTAGGTTTGTCTTAGGTTTCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS-3UTR CAA 90 bp TCCCCAACATCAGTCATGCACAGGGTTGGTAGATGTGTTGCTAAAAACGCACATACACCCACAATTGCATaGGCTACTAATATGAGTAAA +
Preference number: 5 (lower is better)
Translates to: SPTSVMHRVGRCVAKNAHTPTIA*ATNMSK
Trigger: TTTACTCATATTAGTAGCCAATGCAATTGTGGGTGT...ATGTGCGTTTTTAGCAACACATCTACCAACCCTGTGCATGACTGATGTTGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCCAGACACCCACAATTGCATaGGCTACTAATATGAGTAAA +
Preference number: 5 (lower is better)
Translates to: ATEHPYISAKWFRKRLLQTPTIA*ATNMSK
Trigger: TTTACTCATATTAGTAGCCAATGCAATTGTGGGTGT...CTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAATCCTGTCGATACACTTaGCCCATTTCAGGCTCATAT +
Preference number: 5 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKSCRYT*PISGSY
Trigger: ATATGAGCCTGAAATGGGCAAAGTGTATCGACAGGA...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTACGGGATCAGTGTGCTaGATGACAGAGACAGATTCA +
Preference number: 5 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLTGSVC*MTETDS
Trigger: TGAATCTGTCTCTGTCATCAAGCACACTGATCCCGT...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCCAATGGCATTTTTCTTaGCCATTCTGCGAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTQWHFS*PFCEFQ
Trigger: TTGGAACTCGCAGAATGGCAAAGAAAAATGCCATTG...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCGTAAGTGTACCAGTCTaGTCTGAGCAGATAACAGAA +
Preference number: 5 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTVSVPV*SEQITE
Trigger: TTCTGTTATCTGCTCAGACAAGACTGGTACACTTAC...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTACTCTACAAAGAGCACAAATaGTTGCTAATTCTACCAGAC +
Preference number: 5 (lower is better)
Translates to: HATEHPYISAKWFRKRLLYKEHK*LLILPD
Trigger: GTCTGGTAGAATTAGCAACAATTTGTGCTCTTTGTA...GAGTAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGAAGCGGTTATACAGTAAACCGACATaGACTTTCTGTCACGTGAAA +
Preference number: 5 (lower is better)
Translates to: MHATEHPYISAKWFRKRLYSKPT*TFCHVK
Trigger: TTTCACGTGACAGAAAGTCAATGTCGGTTTACTGTA...TAACCGCTTCCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGCAAACATCTTGCTCATaGATGTCCTGCTTGGTTTAT +
Preference number: 5 (lower is better)
Translates to: VAKNAHARNRTPLHFCKMQTSCS*MSCLVY
Trigger: ATAAACCAAGCAGGACATCAATGAGCAAGATGTTTG...CATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACCCCTTCACAAACATCTaGCTCATTGATGTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHPFTNI*LIDVLL
Trigger: AAGCAGGACATCAATGAGCAAGATGTTTGTGAAGGG...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGCCCTTCACAAACATCTaGCTCATTGATGTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRPFTNI*LIDVLL
Trigger: AAGCAGGACATCAATGAGCAAGATGTTTGTGAAGGG...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp CAGATTTTACAAAACACACACATACACACACATACACACTTGCCCTTATGTTCTCCTTCAAAGTCCGGGTaGTCCTCTTTACACTGTAGG +
Preference number: 5 (lower is better)
Translates to: QILQNTHIHTHTHLPLCSPSKSG*SSLHCR
Trigger: CCTACAGTGTAAAGAGGACAACCCGGACTTTGAAGG...AGAACATAAGGGCAAGTGTGTATGTGTGTGTATGTGTGTGTTTTGTAAAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTGGGTTGGTAGATGTGTaGCTAAAAACGCACATGCAC +
Preference number: 5 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLGLVDV*LKTHMH
Trigger: GTGCATGTGCGTTTTTAGCAACACATCTACCAACCC...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAGAGAAATGTGGCGACTaGGCTGACGGCTTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: ASQYLYCTNICLLLLISLEKCGD*ADGFQV
Trigger: AACTTGGAAGCCGTCAGCCAAGTCGCCACATTTCTC...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp AAAACGCACATGCACGCAACCGAACACCCTTACATTTCTGCAAAATGGTTTAGGATAAGCTATGACATTTaGCAGAGAAATGTGGCGACT +
Preference number: 5 (lower is better)
Translates to: KTHMHATEHPYISAKWFRISYDI*QRNVAT
Trigger: AGTCGCCACATTTCTCTGCAAAATGTCATAGCTTAT...CCTAAACCATTTTGCAGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTCTGTGCGACGCTCATaGTTACCAGCACAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLSVRRS*LPAQKE
Trigger: TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTACCAGAGATGCACTCCTaGCATTTGGCCCATTCAACC +
Preference number: 5 (lower is better)
Translates to: ASQYLYCTNICLLLLISLPEMHS*HLAHST
Trigger: GGTTGAATGGGCCAAATGCAAGGAGTGCATCTCTGG...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTACAGTGGCTAGATGCTaGGTAGACACTGAGCTAATC +
Preference number: 5 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLTVARC*VDTELI
Trigger: GATTAGCTCAGTGTCTACCAAGCATCTAGCCACTGT...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS-3UTR CAA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGCGGTTACTCCAGTATaGCTGAAAAGGAAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKAVTPV*LKRKER
Trigger: TCTCTCTTTCCTTTTCAGCAATACTGGAGTAACCGC...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539276.7
CDS TCA 90 bp TACAGTGGCAAAGTTGAAGAGAATGTCCTAATGCAGGACAAACTGTaGATTCTGTATCTATGTTTTGGCATAGCAGACCCCATCTTAGTG +
Preference number: 5 (lower is better)
Translates to: YSGKVEENVLMQDKL*ILYLCFGIADPILV
Trigger: CACTAAGATGGGGTCTGCTATGCCAAAACATAGATACAGAATTCACAGTTTGTCCTGCATTAGGACATTCTCTTCAACTTTGCCACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS-3UTR CAA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAATTTCATCCCGGATCTaGCCAATTTCGGTGTTAACT +
Preference number: 5 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKISSRI*PISVLT
Trigger: AGTTAACACCGAAATTGGCAAGATCCGGGATGAAAT...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp GTAGATGTGTTGCTAAAAACGCACATGCACGCAACCGAACACCCTTACATTTCTAAAGAGCACAAATTGTaGCTAATTCTACCAGACCAT +
Preference number: 5 (lower is better)
Translates to: VDVLLKTHMHATEHPYISKEHKL*LILPDH
Trigger: ATGGTCTGGTAGAATTAGCAACAATTTGTGCTCTTT...AGAAATGTAAGGGTGTTCGGTTGCGTGCATGTGCGTTTTTAGCAACACATCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAATGTTTAATGACTGAGTaGCAGGCATTTGCACGTTCT +
Preference number: 5 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKCLMTE*QAFARS
Trigger: AGAACGTGCAAATGCCTGCAACTCAGTCATTAAACA...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCTACAGTAAACCGACATaGACTTTCTGTCACGTGAAA +
Preference number: 5 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTYSKPT*TFCHVK
Trigger: TTTCACGTGACAGAAAGTCAATGTCGGTTTACTGTA...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTATGACTTACACACTGTaGGTGAGACTCATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLMTYTL*VRLISN
Trigger: GTTCGAGATGAGTCTCACCAACAGTGTGTAAGTCAT...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS TCA 90 bp CGACTGATAAGCAGCATGAACAATAAACCAGGTTCAAATACTCACTaGGTTGCAGGCATTTGCACGTTCTATTTTAGAAAGACCCTTCAA +
Preference number: 5 (lower is better)
Translates to: RLISSMNNKPGSNTH*VAGICTFYFRKTLQ
Trigger: TTGAAGGGTCTTTCTAAAATAGAACGTGCAAATGCCTGCAACTCAGTGAGTATTTGAACCTGGTTTATTGTTCATGCTGCTTATCAGTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS-3UTR CAA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAATATCAGCAGGAACTTaGTCACCAACAGCAATTTCT +
Preference number: 5 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKISAGT*SPTAIS
Trigger: AGAAATTGCTGTTGGTGACAAAGTTCCTGCTGATAT...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp AAAACTGATGTAAACAGAACGAACCATCACAATCCTAAAGAAGAAGCCAAGCGGATATCAGCAGGAACTTaGTCACCAACAGCAATTTCT +
Preference number: 5 (lower is better)
Translates to: KTDVNRTNHHNPKEEAKRISAGT*SPTAIS
Trigger: AGAAATTGCTGTTGGTGACAAAGTTCCTGCTGATAT...CCGCTTGGCTTCTTCTTTAGGATTGTGATGGTTCGTTCTGTTTACATCAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTAAAAAGTAGCATGTTCCAATGTCACTGGAGAGGGATCTGGCTACTTACAACCTACAAAGAGCACAAATaGTTGCTAATTCTACCAGAC +
Preference number: 5 (lower is better)
Translates to: LKSSMFQCHWRGIWLLTTYKEHK*LLILPD
Trigger: GTCTGGTAGAATTAGCAACAATTTGTGCTCTTTGTA...GGTTGTAAGTAGCCAGATCCCTCTCCAGTGACATTGGAACATGCTACTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp ATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAATCATATTTAATAAAGTaGGCAGAGTCCTCAAGGTGC +
Preference number: 5 (lower is better)
Translates to: IYLPETMSVRRSLLPAQKSYLIK*AESSRC
Trigger: GCACCTTGAGGACTCTGCCAACTTTATTAAATATGA...TTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp TATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAGAAAGAACCAACGAAGGTCAGATaGGTCTCATATTTAATAAAG +
Preference number: 5 (lower is better)
Translates to: YLPETMSVRRSLLPAQKEPTKVR*VSYLIK
Trigger: CTTTATTAAATATGAGACCAATCTGACCTTCGTTGG...TTCTTTCTGTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp AATAGATTTATTTACCTGAAACCATGTCTGTGCGACGCTCATTGTTACCAGCACAAAGAGCACAAATTGTaGCTAATTCTACCAGACCAT +
Preference number: 5 (lower is better)
Translates to: NRFIYLKPCLCDAHCYQHKEHKL*LILPDH
Trigger: ATGGTCTGGTAGAATTAGCAACAATTTGTGCTCTTT...GTGCTGGTAACAATGAGCGTCGCACAGACATGGTTTCAGGTAAATAAATCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAGACATGATCTTCTGTTaGACTCCAGAGGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: ASQYLYCTNICLLLLISLDMIFC*TPEVIG
Trigger: TCCTATGACCTCTGGAGTCAAACAGAAGATCATGTC...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp TTCTTAGATAAGGTTACAGAGCCTCATTCCTCTTGCAGCAAAGAAACCAAACTTTCATATTTAATAAAGTaGGCAGAGTCCTCAAGGTGC +
Preference number: 5 (lower is better)
Translates to: FLDKVTEPHSSCSKETKLSYLIK*AESSRC
Trigger: GCACCTTGAGGACTCTGCCAACTTTATTAAATATGA...AAGTTTGGTTTCTTTGCTGCAAGAGGAATGAGGCTCTGTAACCTTATCTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTATTTTCGGACAAGCTGTaGAGGGCGTTACACATTTCT +
Preference number: 5 (lower is better)
Translates to: ASQYLYCTNICLLLLISLFSDKL*RALHIS
Trigger: AGAAATGTGTAACGCCCTCAACAGCTTGTCCGAAAA...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTAATGACTTACACACTGTaGGTGAGACTCATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: ASQYLYCTNICLLLLISLMTYTL*VRLISN
Trigger: GTTCGAGATGAGTCTCACCAACAGTGTGTAAGTCAT...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377685.9
ENST00000539276.7
CDS-3UTR CAA 90 bp GCATCACAATATTTGTATTGCACCAACATCTGTCTACTGCTTCTGATTTCATTATACAGTAAACCGACATaGACTTTCTGTCACGTGAAA +
Preference number: 5 (lower is better)
Translates to: ASQYLYCTNICLLLLISLYSKPT*TFCHVK
Trigger: TTTCACGTGACAGAAAGTCAATGTCGGTTTACTGTA...TAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS CAA 72 bp CGCGGGGCGTCTCGAGGCGCCCTCGGGCTGATGTCCTaGGCTCGCCTCCTCGCCCTCGGTCGCCCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RGASRGALGLMS*ARLLALGRPGC
Trigger: GCAGCCCGGGCGACCGAGGGCGAGGAGGCGAGCCAAGGACATCAGCCCGAGGGCGCCTCGAGACGCCCCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552636.2
CDS CAA 90 bp CGCGGTCCACGCGGGGCGTCTCGAGGCGCCCTCGGGCTGATGTCCTaGGCTCGCCTCCTCGCCCTCGGTCGCCCGGGCTGCGCTCTGCAT +
Preference number: 6 (lower is better)
Translates to: RGPRGASRGALGLMS*ARLLALGRPGCALH
Trigger: ATGCAGAGCGCAGCCCGGGCGACCGAGGGCGAGGAGGCGAGCCAAGGACATCAGCCCGAGGGCGCCTCGAGACGCCCCGCGTGGACCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552636.2
CDS CCA 72 bp GCACCTCCTCCACCGTCTTGGTGTGCGCGTTCTCCATaGCTTCGGGGGCCCGGCCGGCCTCGCCTCCCGTCC +
Preference number: 6 (lower is better)
Translates to: APPPPSWCARSP*LRGPGRPRLPS
Trigger: GGACGGGAGGCGAGGCCGGCCGGGCCCCCGAAGCCATGGAGAACGCGCACACCAAGACGGTGGAGGAGGTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS CCA 72 bp ACGCAGGGTGGGGCGCTCACAGTGGGCACGCTGCTCTaGGGCCGGTGGGCGGATGGTTGGAAGGCGAGGCCG +
Preference number: 6 (lower is better)
Translates to: TQGGALTVGTLL*GRWADGWKARP
Trigger: CGGCCTCGCCTTCCAACCATCCGCCCACCGGCCCCAGAGCAGCGTGCCCACTGTGAGCGCCCCACCCTGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552636.2
CDS GCA 72 bp CCTCAGCGCCGCACGCCCGACAGCGGCGGAGGAAACTaGGGCGAAGGAAAAGGAGGTGGCGTCGGGGACGGC +
Preference number: 6 (lower is better)
Translates to: PQRRTPDSGGGN*GEGKGGGVGDG
Trigger: GCCGTCCCCGACGCCACCTCCTTTTCCTTCGCCGCAGTTTCCTCCGCCGCTGTCGGGCGTGCGGCGCTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS GCA 72 bp CCGAAGTGGCCCAGCACCTCCTCCACCGTCTTGGTGTaGGCGTTCTCCATGGCTTCGGGGGCCCGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: PKWPSTSSTVLV*AFSMASGARPA
Trigger: GGCCGGCCGGGCCCCCGAAGCCATGGAGAACGCGCACACCAAGACGGTGGAGGAGGTGCTGGGCCACTTCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS CAA 90 bp GTACTCTCGTTGACGCCGAAGTGGCCCAGCACCTCCTCCACCGTCTaGGTGTGCGCGTTCTCCATGGCTTCGGGGGCCCGGCCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: VLSLTPKWPSTSSTV*VCAFSMASGARPAS
Trigger: CGAGGCCGGCCGGGCCCCCGAAGCCATGGAGAACGCGCACACCAAGACGGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAACGAGAGTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS GCA 72 bp TCCGCGGCGGCTGCTCTAATAGCATTTATCGGCCGCTaGCTCCCCTTTCGCCGCCGCCGCGGCATGTGGACG +
Preference number: 6 (lower is better)
Translates to: SAAAALIAFIGR*LPFRRRRGMWT
Trigger: CGTCCACATGCCGCGGCGGCGGCGAAAGGGGAGGCAGCGGCCGATAAATGCTATTAGAGCAGCCGCCGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308664.10
CDS CCA 72 bp CAGCGGCGGAGGAAACTGCGGCGAAGGAAAAGGAGGTaGCGTCGGGGACGGCTCCGCGGCGGCTGCTCTAAT +
Preference number: 6 (lower is better)
Translates to: QRRRKLRRRKRR*RRGRLRGGCSN
Trigger: ATTAGAGCAGCCGCCGCGGAGCCGTCCCCGACGCCACCTCCTTTTCCTTCGCCGCAGTTTCCTCCGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS CAA 72 bp TTGACGCCGAAGTGGCCCAGCACCTCCTCCACCGTCTaGGTGTGCGCGTTCTCCATGGCTTCGGGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: LTPKWPSTSSTV*VCAFSMASGAR
Trigger: CCGGGCCCCCGAAGCCATGGAGAACGCGCACACCAAGACGGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS CCA 72 bp TCCAGGCTCAGCCCCGTACTCTCGTTGACGCCGAAGTaGCCCAGCACCTCCTCCACCGTCTTGGTGTGCGCG +
Preference number: 6 (lower is better)
Translates to: SRLSPVLSLTPK*PSTSSTVLVCA
Trigger: CGCGCACACCAAGACGGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAACGAGAGTACGGGGCTGAGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS GCA 72 bp GGTGGAGTTTCACTCTGTCGCCTAGGCTGGGTGGACTaGAATGGCACGACTCGGCTCACTGCAACCTCCGCC +
Preference number: 6 (lower is better)
Translates to: GGVSLCRLGWVD*NGTTRLTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCGAGTCGTGCCATTGCAGTCCACCCAGCCTAGGCGACAGAGTGAAACTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS CAA 72 bp TTCTTGACCTGTTCCAGGCTCAGCCCCGTACTCTCGTaGACGCCGAAGTGGCCCAGCACCTCCTCCACCGTC +
Preference number: 6 (lower is better)
Translates to: FLTCSRLSPVLS*TPKWPSTSSTV
Trigger: GACGGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAACGAGAGTACGGGGCTGAGCCTGGAACAGGTCAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS CAA 90 bp TCCTTAAGCTTCTTGACCTGTTCCAGGCTCAGCCCCGTACTCTCGTaGACGCCGAAGTGGCCCAGCACCTCCTCCACCGTCTTGGTGTGC +
Preference number: 6 (lower is better)
Translates to: SLSFLTCSRLSPVLS*TPKWPSTSSTVLVC
Trigger: GCACACCAAGACGGTGGAGGAGGTGCTGGGCCACTTCGGCGTCAACGAGAGTACGGGGCTGAGCCTGGAACAGGTCAAGAAGCTTAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308664.10
ENST00000377685.9
ENST00000539276.7
CDS CCA 72 bp GACTGGTTTTCGGACAAGCTGCAGAGCAAGGAGAGGTaGGGAAACGCACCCCCAAGGCAAGGCACGTGTCAC +
Preference number: 6 (lower is better)
Translates to: DWFSDKLQSKER*GNAPPRQGTCH
Trigger: GTGACACGTGCCTTGCCTTGGGGGTGCGTTTCCCCACCTCTCCTTGCTCTGCAGCTTGTCCGAAAACCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS CAA 90 bp TCTTCAGCCGGTAACTCGTTGGAGCCCCATCTCTCCTTAAGCTTCTaGACCTGTTCCAGGCTCAGCCCCGTACTCTCGTTGACGCCGAAG +
Preference number: 6 (lower is better)
Translates to: SSAGNSLEPHLSLSF*TCSRLSPVLSLTPK
Trigger: CTTCGGCGTCAACGAGAGTACGGGGCTGAGCCTGGAACAGGTCAAGAAGCTTAAGGAGAGATGGGGCTCCAACGAGTTACCGGCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS CAA 72 bp CACCTACCGTTGGAGCCCCATCTCTCCTTAAGCTTCTaGACCTGTTCCAGGCTCAGCCCCGTACTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: HLPLEPHLSLSF*TCSRLSPVLSL
Trigger: CAACGAGAGTACGGGGCTGAGCCTGGAACAGGTCAAGAAGCTTAAGGAGAGATGGGGCTCCAACGGTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS CAA 72 bp GGTAACTCGTTGGAGCCCCATCTCTCCTTAAGCTTCTaGACCTGTTCCAGGCTCAGCCCCGTACTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: GNSLEPHLSLSF*TCSRLSPVLSL
Trigger: CAACGAGAGTACGGGGCTGAGCCTGGAACAGGTCAAGAAGCTTAAGGAGAGATGGGGCTCCAACGAGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308664.10
ENST00000539276.7
CDS GCA 72 bp TTCGAGACAGAGGTCTTGCTCTATCACCCGGGCTGGTaGAATGGCACCATCACAACTCACTACAGCCTCAAC +
Preference number: 6 (lower is better)
Translates to: FETEVLLYHPGW*NGTITTHYSLN
Trigger: GTTGAGGCTGTAGTGAGTTGTGATGGTGCCATTGCACCAGCCCGGGTGATAGAGCAAGACCTCTGTCTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547050.1
CDS GCA 72 bp CAACCCCATACCAAGCCTAGCACAGACCAGCCTGAATaGAGAGCCAGCCAAGAGGTTTACCCCAATTTCTCG +
Preference number: 6 (lower is better)
Translates to: QPHTKPSTDQPE*RASQEVYPNFS
Trigger: CGAGAAATTGGGGTAAACCTCTTGGCTGGCTCTGCATTCAGGCTGGTCTGTGCTAGGCTTGGTATGGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547792.1
CDS CCA 72 bp AAGGTGACTGAGTACCAGCTGGTAGAAGGACACTCTTaGACCACCGTCAGCAGCAATGAACCACCATGCAGC +
Preference number: 6 (lower is better)
Translates to: KVTEYQLVEGHS*TTVSSNEPPCS
Trigger: GCTGCATGGTGGTTCATTGCTGCTGACGGTGGTCCAAGAGTGTCCTTCTACCAGCTGGTACTCAGTCACCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547792.1
CDS TCA 72 bp CTTAACTGGATGGTACCATTTGTCTGTGTGAAAGGGTaGGGTTCCTTCCCTGTGGGTGCTGGCATACAGGGG +
Preference number: 6 (lower is better)
Translates to: LNWMVPFVCVKG*GSFPVGAGIQG
Trigger: CCCCTGTATGCCAGCACCCACAGGGAAGGAACCTCACCCTTTCACACAGACAAATGGTACCATCCAGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS CCA 72 bp CTGTGTGAAAGGGTGAGGTTCCTTCCCTGTGGGTGCTaGCATACAGGGGTACCAAAGTTCCTATTTTTGGCC +
Preference number: 6 (lower is better)
Translates to: LCERVRFLPCGC*HTGVPKFLFLA
Trigger: GGCCAAAAATAGGAACTTTGGTACCCCTGTATGCCAGCACCCACAGGGAAGGAACCTCACCCTTTCACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS CCA 72 bp CTGTTGGACTACACTTCAGTAAGGCGGCTGTTAATGTaGCACCATCCGCTGACCTACCTCCACTTTCTACAG +
Preference number: 6 (lower is better)
Translates to: LLDYTSVRRLLM*HHPLTYLHFLQ
Trigger: CTGTAGAAAGTGGAGGTAGGTCAGCGGATGGTGCCACATTAACAGCCGCCTTACTGAAGTGTAGTCCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS CAA 72 bp CACAAGTTCCAGCAAGGTTTTTCCCTGCACCTACCGTaGGAGCCCCATCTCTCCTTAAGCTTCTTGACCTGT +
Preference number: 6 (lower is better)
Translates to: HKFQQGFSLHLP*EPHLSLSFLTC
Trigger: ACAGGTCAAGAAGCTTAAGGAGAGATGGGGCTCCAACGGTAGGTGCAGGGAAAAACCTTGCTGGAACTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377685.9
CDS CAA 72 bp TGGAACACCCCAGTTCTGTCAATTCTAAATGTGGGTTaGGACTTCACAAGGAGCTTGCGGGGGAGGGAGAAC +
Preference number: 6 (lower is better)
Translates to: WNTPVLSILNVG*DFTRSLRGREN
Trigger: GTTCTCCCTCCCCCGCAAGCTCCTTGTGAAGTCCAAACCCACATTTAGAATTGACAGAACTGGGGTGTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS GCA 72 bp TGCGACCCACACCAAGAACCTAGAACCTCTCATTCATaGCCACCCATTACCACTCTTGGGATACTGTTAGTG +
Preference number: 6 (lower is better)
Translates to: CDPHQEPRTSHS*PPITTLGILLV
Trigger: CACTAACAGTATCCCAAGAGTGGTAATGGGTGGGCATGAATGAGAGGTTCTAGGTTCTTGGTGTGGGTCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547050.1
CDS CAA 90 bp TTTGAAAGTTGGAACACCCCAGTTCTGTCAATTCTAAATGTGGGTTaGGACTTCACAAGGAGCTTGCGGGGGAGGGAGAACCTGTATCTA +
Preference number: 6 (lower is better)
Translates to: FESWNTPVLSILNVG*DFTRSLRGRENLYL
Trigger: TAGATACAGGTTCTCCCTCCCCCGCAAGCTCCTTGTGAAGTCCAAACCCACATTTAGAATTGACAGAACTGGGGTGTTCCAACTTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS TCA 72 bp TCCTGCAGAATACCAATTAGCACCAGCTTCCTGTTGTaGGGTAGAGCTTCACTCAGAACAGGCAGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: SCRIPISTSFLL*GRASLRTGRLF
Trigger: AAAAAGCCTGCCTGTTCTGAGTGAAGCTCTACCTCACAACAGGAAGCTGGTGCTAATTGGTATTCTGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS TCA 72 bp ACCAAAGACACAACAACCCACACAAAATCCAAGTTATaGGGACTCCCGGTCAGCAAAAGGTCAGTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: TKDTTTHTKSKL*GLPVSKRSVPE
Trigger: CTCTGGAACTGACCTTTTGCTGACCGGGAGTCCTCATAACTTGGATTTTGTGTGGGTTGTTGTGTCTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS GCA 72 bp CTGTCCCTTACCCTAACTAGCTTAATTATATTAGACTaGTTCGCCCATCACACCCCCGACCAATCGAACAGT +
Preference number: 6 (lower is better)
Translates to: LSLTLTSLIILD*FAHHTPDQSNS
Trigger: ACTGTTCGATTGGTCGGGGGTGTGATGGGCGAAGCAGTCTAATATAATTAAGCTAGTTAGGGTAAGGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS CAA 90 bp CCCCATCTTAGTGGGTTCAAAGCTGTTCCCAATTGCCCTGGAGACTaGGGCTATTTAGAAATTTCCATTTTTGTCACGGGCTTAACTGGA +
Preference number: 6 (lower is better)
Translates to: PHLSGFKAVPNCPGD*GYLEISIFVTGLTG
Trigger: TCCAGTTAAGCCCGTGACAAAAATGGAAATTTCTAAATAGCCCAAGTCTCCAGGGCAATTGGGAACAGCTTTGAACCCACTAAGATGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS CAA 90 bp CCCGGTCAGCAAAAGGTCAGTTCCAGAGACAAGTTACTCTTTAGATaGCTCAGAATCCCAAATTTCAAATGGCTGGCTGTGAGAGTGGTA +
Preference number: 6 (lower is better)
Translates to: PGQQKVSSRDKLLFR*LRIPNFKWLAVRVV
Trigger: TACCACTCTCACAGCCAGCCATTTGAAATTTGGGATTCTGAGCAATCTAAAGAGTAACTTGTCTCTGGAACTGACCTTTTGCTGACCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS TCA 72 bp CCGCTGACCTACCTCCACTTTCTACAGTGGCAAAGTTaGAGAGAATGTCCTAATGCAGGACAAACTGTGAAT +
Preference number: 6 (lower is better)
Translates to: PLTYLHFLQWQS*RECPNAGQTVN
Trigger: ATTCACAGTTTGTCCTGCATTAGGACATTCTCTTCAACTTTGCCACTGTAGAAAGTGGAGGTAGGTCAGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS GCA 72 bp TGCAGGATGAAAATCTTCCTAAGTCAAGGGCAGTTATaGAATACCACTGCAAGAAGCCTCCTGCAGAATACC +
Preference number: 6 (lower is better)
Translates to: CRMKIFLSQGQL*NTTARSLLQNT
Trigger: GGTATTCTGCAGGAGGCTTCTTGCAGTGGTATTGCATAACTGCCCTTGACTTAGGAAGATTTTCATCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS CAA 72 bp AGTGGGTTCAAAGCTGTTCCCAATTGCCCTGGAGACTaGGGCTATTTAGAAATTTCCATTTTTGTCACGGGC +
Preference number: 6 (lower is better)
Translates to: SGFKAVPNCPGD*GYLEISIFVTG
Trigger: GCCCGTGACAAAAATGGAAATTTCTAAATAGCCCAAGTCTCCAGGGCAATTGGGAACAGCTTTGAACCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS GCA 72 bp AGACCCCATCTTAGTGGGTTCAAAGCTGTTCCCAATTaGCCTGGAGACTTGGGCTATTTAGAAATTTCCATT +
Preference number: 6 (lower is better)
Translates to: RPHLSGFKAVPN*PGDLGYLEISI
Trigger: AATGGAAATTTCTAAATAGCCCAAGTCTCCAGGGCAATTGGGAACAGCTTTGAACCCACTAAGATGGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS GCA 72 bp AATCTTCCTAAGTCAAGGGCAGTTATGCAATACCACTaGAAGAAGCCTCCTGCAGAATACCAATTAGCACCA +
Preference number: 6 (lower is better)
Translates to: NLPKSRAVMQYH*KKPPAEYQLAP
Trigger: TGGTGCTAATTGGTATTCTGCAGGAGGCTTCTTGCAGTGGTATTGCATAACTGCCCTTGACTTAGGAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS CCA 72 bp AGCCAAGAGGTTTACCCCAATTTCTCGGAGAAGCCCTaGTCCTTCAGAATCATCTTAGATGTAACTGTTTAT +
Preference number: 6 (lower is better)
Translates to: SQEVYPNFSEKP*SFRIILDVTVY
Trigger: ATAAACAGTTACATCTAAGATGATTCTGAAGGACCAGGGCTTCTCCGAGAAATTGGGGTAAACCTCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547792.1
CDS CCA 72 bp CCTAAGACAAACCTAGAAGCTTTCCACTTTGAAAGTTaGAACACCCCAGTTCTGTCAATTCTAAATGTGGGT +
Preference number: 6 (lower is better)
Translates to: PKTNLEAFHFES*NTPVLSILNVG
Trigger: ACCCACATTTAGAATTGACAGAACTGGGGTGTTCCAACTTTCAAAGTGGAAAGCTTCTAGGTTTGTCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS CAA 72 bp CAAAAGGTCAGTTCCAGAGACAAGTTACTCTTTAGATaGCTCAGAATCCCAAATTTCAAATGGCTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: QKVSSRDKLLFR*LRIPNFKWLAV
Trigger: CACAGCCAGCCATTTGAAATTTGGGATTCTGAGCAATCTAAAGAGTAACTTGTCTCTGGAACTGACCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550262.1
CDS TCA 72 bp AAAGTTGAAGAGAATGTCCTAATGCAGGACAAACTGTaGATTCTGTATCTATGTTTTGGCATAGCAGACCCC +
Preference number: 6 (lower is better)
Translates to: KVEENVLMQDKL*ILYLCFGIADP
Trigger: GGGGTCTGCTATGCCAAAACATAGATACAGAATTCACAGTTTGTCCTGCATTAGGACATTCTCTTCAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313432.5
CDS TCA 72 bp AGCAGCATGAACAATAAACCAGGTTCAAATACTCACTaGGTTGCAGGCATTTGCACGTTCTATTTTAGAAAG +
Preference number: 6 (lower is better)
Translates to: SSMNNKPGSNTH*VAGICTFYFRK
Trigger: CTTTCTAAAATAGAACGTGCAAATGCCTGCAACTCAGTGAGTATTTGAACCTGGTTTATTGTTCATGCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550262.1