RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP23 (Homo sapiens)

Ensembl gene IDs: ENSG00000166896

Ensembl transcript IDs: ENST00000300145.4, ENST00000546709.1, ENST00000549257.5, ENST00000551997.1, ENST00000570321.5, ENST00000571490.1, ENST00000574747.1, ENST00000576795.1, ENST00000647763.1

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCACAGCCCCAAGTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTaGAAACTTGCCCCAGGCTACCCACCTCCCAGCTGTGAAAGAAAA +
Preference number: 1 (lower is better)
Translates to: HHSPKSASRWWVRQA*KLAPGYPPPSCERK
Trigger: TTTTCTTTCACAGCTGGGAGGTGGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGACTTGGGGCTGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 90 bp GCTAGAGATGTCCTTCTCCCTGTGGAGTTTTACCCGCTGCTCTTCTaGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGCAGGAATGGG +
Preference number: 1 (lower is better)
Translates to: ARDVLLPVEFYPLLF*LPLQWISVVTGRNG
Trigger: CCCATTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGGTAAAACTCCACAGGGAGAAGGACATCTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 90 bp AAGAGCTTGGTTCTTCCCCTCTGTGGATTCTGCACATGGGATTTGTaGCCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAA +
Preference number: 1 (lower is better)
Translates to: KSLVLPLCGFCTWDL*PLPSSGREASCPIE
Trigger: TTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 90 bp CCAGCTGTGAAAGAAAAGAGCTTGGTTCTTCCCCTCTGTGGATTCTaGACATGGGATTTGTGCCCTCTCCCAAGTTCTGGCCGGGAGGCT +
Preference number: 1 (lower is better)
Translates to: PAVKEKSLVLPLCGF*TWDLCPLPSSGREA
Trigger: AGCCTCCCGGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCACAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 90 bp CCACCTCCCAGCTGTGAAAGAAAAGAGCTTGGTTCTTCCCCTCTGTaGATTCTGCACATGGGATTTGTGCCCTCTCCCAAGTTCTGGCCG +
Preference number: 1 (lower is better)
Translates to: PPPSCERKELGSSPL*ILHMGFVPSPKFWP
Trigger: CGGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCACAGCTGGGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 90 bp GTGAAAGAAAAGAGCTTGGTTCTTCCCCTCTGTGGATTCTGCACATaGGATTTGTGCCCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGC +
Preference number: 1 (lower is better)
Translates to: VKEKSLVLPLCGFCT*DLCPLPSSGREASC
Trigger: GCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 90 bp CTGCCAGGAGGTAGCGCTTTCCAGAGAGCATCAGTTGTGGTAGTATaGAGAAGAACTTGTGGTGAGTGGGGCCCTAGAACTCCCAAGATT +
Preference number: 1 (lower is better)
Translates to: LPGGSAFQRASVVVV*RRTCGEWGPRTPKI
Trigger: AATCTTGGGAGTTCTAGGGCCCCACTCACCACAAGTTCTTCTCCATACTACCACAACTGATGCTCTCTGGAAAGCGCTACCTCCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR TCA 90 bp TTTGTGCCCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTaGAATAGTTACAAAGTTCAGCTAGAGATGTCCTTCTCCCTGTGG +
Preference number: 1 (lower is better)
Translates to: FVPSPKFWPGGFLPH*NSYKVQLEMSFSLW
Trigger: CCACAGGGAGAAGGACATCTCTAGCTGAACTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGGGCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 90 bp AGGAGCAGTCGCTTCCTTCAGAGGGTCTGTGGGTCCTCTCAGTATTaGTGGTTTGTTCTTGCAGTCGATCTGGAGCTAAAATTCGAGCAC +
Preference number: 1 (lower is better)
Translates to: RSSRFLQRVCGSSQY*WFVLAVDLELKFEH
Trigger: GTGCTCGAATTTTAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGACCCTCTGAAGGAAGCGACTGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 90 bp AGCAGTCGCTTCCTTCAGAGGGTCTGTGGGTCCTCTCAGTATTGCTaGTTTGTTCTTGCAGTCGATCTGGAGCTAAAATTCGAGCACTGC +
Preference number: 1 (lower is better)
Translates to: SSRFLQRVCGSSQYC*FVLAVDLELKFEHC
Trigger: GCAGTGCTCGAATTTTAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGACCCTCTGAAGGAAGCGACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 90 bp AGAAGAACTTGTGGTGAGTGGGGCCCTAGAACTCCCAAGATTGTATaGCCTTTTTGTTCAGATACCAGGGTGGGTAGGGAAGGAACATCA +
Preference number: 1 (lower is better)
Translates to: RRTCGEWGPRTPKIV*PFCSDTRVGREGTS
Trigger: TGATGTTCCTTCCCTACCCACCCTGGTATCTGAACAAAAAGGGCATACAATCTTGGGAGTTCTAGGGCCCCACTCACCACAAGTTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 90 bp TCTGATGTTGGTGAACCAGTCGACATGGGCACGACAATGATCAAATaGATGAATAAGCTCGTGTGTGACCACTCTGTTCATATGGGCCTG +
Preference number: 1 (lower is better)
Translates to: SDVGEPVDMGTTMIK*MNKLVCDHSVHMGL
Trigger: CAGGCCCATATGAACAGAGTGGTCACACACGAGCTTATTCATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTCACCAACATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR-3UTR CCA 90 bp TTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCACCTCCACCCAGCGAGCTCCCTaGGCCTTCCTGCTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: FQVVGETGLKTCPRLPTSTQRAP*AFLLLA
Trigger: AGCAAGCAGCAGGAAGGCCCAGGGAGCTCGCTGGGT...GGAGGTGGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CCA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCCAGGAATGGGCTGCTTaGGGACCCAGCGAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPQEWAA*GPSELP
Trigger: AGGGAGCTCGCTGGGTCCCCAAGCAGCCCATTCCTG...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 90 bp GTCCTTCTCCCTGTGGAGTTTTACCCGCTGCTCTTCTGGCTGCCCTaGCAATGGATCTCTGTGGTGACAGGCAGGAATGGGCTGCTTGGG +
Preference number: 2 (lower is better)
Translates to: VLLPVEFYPLLFWLP*QWISVVTGRNGLLG
Trigger: CCCAAGCAGCCCATTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGGTAAAACTCCACAGGGAGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 90 bp GGAGGGTCTCCCTTTCCCACTTCTGCAGTTGGGCACTCACAGTATTaGGGGTGTCTCCTGGGCACTGTAGGAGCAGTCGCTTCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: GGSPFPTSAVGHSQY*GCLLGTVGAVASFR
Trigger: TCTGAAGGAAGCGACTGCTCCTACAGTGCCCAGGAGACACCCCAAATACTGTGAGTGCCCAACTGCAGAAGTGGGAAAGGGAGACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR GCA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGCCTGGGCCTTCCTGCTaGTTGCTCTACCCCTGTATT +
Preference number: 2 (lower is better)
Translates to: YDCLWGVMQVVREVGESRPGPSC*LLYPCI
Trigger: AATACAGGGGTAGAGCAAGCAGCAGGAAGGCCCAGG...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR GCA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGACAGGCTTGAAAACTTaGCCCAGGCTACCCACCTCC +
Preference number: 2 (lower is better)
Translates to: YDCLWGVMQVVREVGESRTGLKT*PRLPTS
Trigger: GGAGGTGGGTAGCCTGGGGCAAGTTTTCAAGCCTGT...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CCA 90 bp TTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCACCTCCCCTTCAGAGGGTCTGTaGGTCCTCTCAGTATTGCTG +
Preference number: 2 (lower is better)
Translates to: FQVVGETGLKTCPRLPTSPSEGL*VLSVLL
Trigger: CAGCAATACTGAGAGGACCCACAGACCCTCTGAAGG...GGAGGTGGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR TCA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGCTTCCAGGTGGTGGGTaGGACAGGCTTGAAAACTTG +
Preference number: 2 (lower is better)
Translates to: YDCLWGVMQVVREVGESRLPGGG*DRLENL
Trigger: CAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAG...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR GCA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGCTCCCTGGGCCTTCCTaGTGCTTGCTCTACCCCTGT +
Preference number: 2 (lower is better)
Translates to: PLPSSGREASCPIEIVTKLPGPS*CLLYPC
Trigger: ACAGGGGTAGAGCAAGCAGCAGGAAGGCCCAGGGAG...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR GCA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCGGCCGGGAGGCTTCTTaGCCCATTGAAATAGTTACA +
Preference number: 2 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPGREAS*PIEIVT
Trigger: TGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCC...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR GCA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGCCCCTCTGTGGATTCTaGACATGGGATTTGTGCCCT +
Preference number: 2 (lower is better)
Translates to: YDCLWGVMQVVREVGESRPLCGF*TWDLCP
Trigger: AGGGCACAAATCCCATGTGCAGAATCCACAGAGGGG...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CCA 90 bp AGCTGTGAAAGAAAAGAGCTTGGTTCTTCCCCTCTGTGGATTCTGCACATGGGACCCTCTCCCAAGTTCTaGCCGGGAGGCTTCTTGCCC +
Preference number: 2 (lower is better)
Translates to: SCERKELGSSPLWILHMGPSPKF*PGGFLP
Trigger: GGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGGG...TCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CCA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCGGTTCTTCCCCTCTGTaGATTCTGCACATGGGATTT +
Preference number: 2 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPGSSPL*ILHMGF
Trigger: AAATCCCATGTGCAGAATCCACAGAGGGGAAGAACC...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CCA 90 bp TTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCACCTCCCTTCTCTGTTTTATCTaGATTGTAGGGATTGTTTAC +
Preference number: 2 (lower is better)
Translates to: FQVVGETGLKTCPRLPTSLLCFI*IVGIVY
Trigger: GTAAACAATCCCTACAATCCAGATAAAACAGAGAAG...GGAGGTGGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CCA 90 bp ACCAGGGTTAGTTTTCTGGTTCCTTCTCATTTGGGTAGTCTCTGTCAAAGGGAAAGCTCAGACTCTCCTTaGGCAGGTCTTGCTGTGACT +
Preference number: 2 (lower is better)
Translates to: TRVSFLVPSHLGSLCQRESSDSP*AGLAVT
Trigger: AGTCACAGCAAGACCTGCCCAAGGAGAGTCTGAGCT...TTCCCTTTGACAGAGACTACCCAAATGAGAAGGAACCAGAAAACTAACCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR TCA 90 bp AAAGTCTCTGTGAGCATATCTTGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAGCAGCTCGAACCTCTaGGCACGCCAAATGTCTGAT +
Preference number: 2 (lower is better)
Translates to: KVSVSISCISLVMWDPSKSSSNL*ARQMSD
Trigger: ATCAGACATTTGGCGTGCTCAGAGGTTCGAGCTGCT...TTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTCACAGAGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR-3UTR TCA 90 bp ATACCGATCACGGTTTTCAAAGTCTCTGTGAGCATATCTTGCATAAGTCTTGTTAGCAGCTCGAACCTCTaGGCACGCCAAATGTCTGAT +
Preference number: 2 (lower is better)
Translates to: IPITVFKVSVSISCISLVSSSNL*ARQMSD
Trigger: ATCAGACATTTGGCGTGCTCAGAGGTTCGAGCTGCT...AACAAGACTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGTGATCGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR CAA 90 bp TTGTTTTGTCATATTACCAGGGTTAGTTTTCTGGTTCCTTCTCATTaGGGTAGTCTCTGTCAAAGGGAAGGTCTAGGGCTGAAGGCCATT +
Preference number: 2 (lower is better)
Translates to: LFCHITRVSFLVPSH*GSLCQREGLGLKAI
Trigger: AATGGCCTTCAGCCCTAGACCTTCCCTTTGACAGAGACTACCCAAATGAGAAGGAACCAGAAAACTAACCCTGGTAATATGACAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CCA 90 bp ACCAGGGTTAGTTTTCTGGTTCCTTCTCATTTGGGTAGTCTCTGTCAAAGGGAATCCTCTCAGTATTGCTaGTTTGTTCTTGCAGTCGAT +
Preference number: 2 (lower is better)
Translates to: TRVSFLVPSHLGSLCQRESSQYC*FVLAVD
Trigger: ATCGACTGCAAGAACAAACCAGCAATACTGAGAGGA...TTCCCTTTGACAGAGACTACCCAAATGAGAAGGAACCAGAAAACTAACCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 90 bp CTCCATTTCCTTGAATATTTCTCCCTTCACTTCTTATATCATTTTTaGGATTTCCTTGCACTGGGCTTTGCCTTTCTCTGGTGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: LHFLEYFSLHFLYHF*DFLALGFAFLWCLP
Trigger: AGGGAGGCACCAGAGAAAGGCAAAGCCCAGTGCAAGGAAATCCAAAAAATGATATAAGAAGTGAAGGGAGAAATATTCAAGGAAATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CCA 90 bp GAGCATATCTTGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCATGGTTCTCGCACACAAGTCTaGTGGTGTTGTTTTAATCCA +
Preference number: 2 (lower is better)
Translates to: EHILHKSCYVGSFQKVHGSRTQV*WCCFNP
Trigger: TGGATTAAAACAACACCACCAGACTTGTGTGCGAGA...ACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR-3UTR TCA 90 bp GAGCATATCTTGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCATGGTTATTTCATTGACAAGTaGGCAGTCTCCACTAAGGTT +
Preference number: 2 (lower is better)
Translates to: EHILHKSCYVGSFQKVHGYFIDK*AVSTKV
Trigger: AACCTTAGTGGAGACTGCTCACTTGTCAATGAAATA...ACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR-3UTR CCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCCTTCTCTGTTTTATCTaGATTGTAGGGATTGTTTAC +
Preference number: 2 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFLLCFI*IVGIVY
Trigger: GTAAACAATCCCTACAATCCAGATAAAACAGAGAAG...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
3UTR-3UTR CCA 90 bp ATACCGATCACGGTTTTCAAAGTCTCTGTGAGCATATCTTGCATAAGTCTTGTTTCTCGCACACAAGTCTaGTGGTGTTGTTTTAATCCA +
Preference number: 2 (lower is better)
Translates to: IPITVFKVSVSISCISLVSRTQV*WCCFNP
Trigger: TGGATTAAAACAACACCACCAGACTTGTGTGCGAGA...AACAAGACTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGTGATCGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR CAA 90 bp TTGAATAATACCGATCACGGTTTTCAAAGTCTCTGTGAGCATATCTaGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCATGGT +
Preference number: 2 (lower is better)
Translates to: LNNTDHGFQSLCEHI*HKSCYVGSFQKVHG
Trigger: ACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGTGATCGGTATTATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR-3UTR GCA 90 bp GAGCATATCTTGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCATGGTACGACAATGATCAAATaGATGAATAAGCTCGTGTGT +
Preference number: 2 (lower is better)
Translates to: EHILHKSCYVGSFQKVHGTTMIK*MNKLVC
Trigger: ACACACGAGCTTATTCATGCATTTGATCATTGTCGT...ACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR CAA 90 bp AAACAAGATTCAAAAACTTCATCAACAGCCTTTTTAGCTACTTCTTaGCTGATATTCCTAACAGCCAGGATAGAAAGAGTGGCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: KQDSKTSSTAFLATS*LIFLTARIERVALS
Trigger: AGACAGAGCCACTCTTTCTATCCTGGCTGTTAGGAATATCAGCAAAGAAGTAGCTAAAAAGGCTGTTGATGAAGTTTTTGAATCTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR-3UTR GCA 90 bp ATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCATGGTCATTGAAACAAGAACGACAATGATCAAATaGATGAATAAGCTCGTGTGT +
Preference number: 2 (lower is better)
Translates to: ISLVMWDPSKRFMVIETRTTMIK*MNKLVC
Trigger: ACACACGAGCTTATTCATGCATTTGATCATTGTCGT...TCTTGTTTCAATGACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR GCA 72 bp GCTGCTTGGGGACCCAGCGAGCTCCCTGGGCCTTCCTaGTGCTTGCTCTACCCCTGTATTTCGCTCGGCTCT +
Preference number: 3 (lower is better)
Translates to: AAWGPSELPGPS*CLLYPCISLGS
Trigger: AGAGCCGAGCGAAATACAGGGGTAGAGCAAGCAGCAGGAAGGCCCAGGGAGCTCGCTGGGTCCCCAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 72 bp GCTTGGGGACCCAGCGAGCTCCCTGGGCCTTCCTGCTaGTTGCTCTACCCCTGTATTTCGCTCGGCTCTCTA +
Preference number: 3 (lower is better)
Translates to: AWGPSELPGPSC*LLYPCISLGSL
Trigger: TAGAGAGCCGAGCGAAATACAGGGGTAGAGCAAGCAGCAGGAAGGCCCAGGGAGCTCGCTGGGTCCCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CAA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGGCAGGAATGGGCTGCTaGGGGACCCAGCGAGCTCCC +
Preference number: 3 (lower is better)
Translates to: PLPSSGREASCPIEIVTKAGMGC*GTQRAP
Trigger: GGGAGCTCGCTGGGTCCCCAAGCAGCCCATTCCTGC...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CAA 90 bp TCTTCTGGGTCTAGCCACCCAGTGAGTCTACCCAGCTCCATGCTGGTACTGGGGGTGGGTGAGACAGGCTaGAAAACTTGCCCCAGGCTA +
Preference number: 3 (lower is better)
Translates to: SSGSSHPVSLPSSMLVLGVGETG*KTCPRL
Trigger: TAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCAC...CCCCAGTACCAGCATGGAGCTGGGTAGACTCACTGGGTGGCTAGACCCAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 72 bp TCCTGTGATGTGAACCGTCTATGGGTCTCTCGGCTGTaGATACCAGCACCTGTTCCAGTGGAGGTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: SCDVNRLWVSRL*IPAPVPVEVAG
Trigger: CCCTGCCACCTCCACTGGAACAGGTGCTGGTATCCACAGCCGAGAGACCCATAGACGGTTCACATCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 72 bp GTTCTTCCCCTCTGTGGATTCTGCACATGGGATTTGTaGCCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGC +
Preference number: 3 (lower is better)
Translates to: VLPLCGFCTWDL*PLPSSGREASC
Trigger: GCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 72 bp GTCCTTCTCCCTGTGGAGTTTTACCCGCTGCTCTTCTaGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGC +
Preference number: 3 (lower is better)
Translates to: VLLPVEFYPLLF*LPLQWISVVTG
Trigger: GCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGGTAAAACTCCACAGGGAGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR TCA 72 bp TCCCAGGTCACTGGAGTTGTGTCCCTAGGAGGATTATaGCTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: SQVTGVVSLGGL*LPLGSHAGCQG
Trigger: TCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATAATCCTCCTAGGGACACAACTCCAGTGACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR TCA 72 bp GTGATTGTTGTCTCTCTTCTGGGTCTAGCCACCCAGTaGGTCTACCCAGCTCCATGCTGGTACTGGGGGTTG +
Preference number: 3 (lower is better)
Translates to: VIVVSLLGLATQ*VYPAPCWYWGL
Trigger: CAACCCCCAGTACCAGCATGGAGCTGGGTAGACTCACTGGGTGGCTAGACCCAGAAGAGAGACAACAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 72 bp AAGAGCTTGGTTCTTCCCCTCTGTGGATTCTGCACATaGGATTTGTGCCCTCTCCCAAGTTCTGGCCGGGAG +
Preference number: 3 (lower is better)
Translates to: KSLVLPLCGFCT*DLCPLPSSGRE
Trigger: CTCCCGGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 72 bp CTAGAGATGTCCTTCTCCCTGTGGAGTTTTACCCGCTaGTCTTCTGGCTGCCCTTGCAATGGATCTCTGTGG +
Preference number: 3 (lower is better)
Translates to: LEMSFSLWSFTR*SSGCPCNGSLW
Trigger: CCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGGTAAAACTCCACAGGGAGAAGGACATCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 72 bp CTGTTGTGGGAGATGAGGGTGAGATTCCCAGGTCACTaGAGTTGTGTCCCTAGGAGGATTATGACTGCCTCT +
Preference number: 3 (lower is better)
Translates to: LLWEMRVRFPGH*SCVPRRIMTAS
Trigger: AGAGGCAGTCATAATCCTCCTAGGGACACAACTCCAGTGACCTGGGAATCTCACCCTCATCTCCCACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CAA 90 bp TCTTCTGGGTCTAGCCACCCAGTGAGTCTACCCAGCTCCATGCTGGTACTGGGGCTAGAACTCCCAAGATaGTATGCCCTTTTTGTTCAG +
Preference number: 3 (lower is better)
Translates to: SSGSSHPVSLPSSMLVLGLELPR*YALFVQ
Trigger: CTGAACAAAAAGGGCATACAATCTTGGGAGTTCTAG...CCCCAGTACCAGCATGGAGCTGGGTAGACTCACTGGGTGGCTAGACCCAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 72 bp TGTGGTGAGTGGGGCCCTAGAACTCCCAAGATTGTATaGCCTTTTTGTTCAGATACCAGGGTGGGTAGGGAA +
Preference number: 3 (lower is better)
Translates to: CGEWGPRTPKIV*PFCSDTRVGRE
Trigger: TTCCCTACCCACCCTGGTATCTGAACAAAAAGGGCATACAATCTTGGGAGTTCTAGGGCCCCACTCACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 72 bp AGTTACAAAGTTCAGCTAGAGATGTCCTTCTCCCTGTaGAGTTTTACCCGCTGCTCTTCTGGCTGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: SYKVQLEMSFSL*SFTRCSSGCPC
Trigger: GCAAGGGCAGCCAGAAGAGCAGCGGGTAAAACTCCACAGGGAGAAGGACATCTCTAGCTGAACTTTGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CAA 90 bp ACCAGGGTTAGTTTTCTGGTTCCTTCTCATTTGGGTAGTCTCTGTCAAAGGGAAGGGCCTTCCTGCTGCTaGCTCTACCCCTGTATTTCG +
Preference number: 3 (lower is better)
Translates to: TRVSFLVPSHLGSLCQREGPSCC*LYPCIS
Trigger: CGAAATACAGGGGTAGAGCAAGCAGCAGGAAGGCCC...TTCCCTTTGACAGAGACTACCCAAATGAGAAGGAACCAGAAAACTAACCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 72 bp GGTCTGTGGGTCCTCTCAGTATTGCTGGTTTGTTCTTaGAGTCGATCTGGAGCTAAAATTCGAGCACTGCCT +
Preference number: 3 (lower is better)
Translates to: GLWVLSVLLVCS*SRSGAKIRALP
Trigger: AGGCAGTGCTCGAATTTTAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 72 bp CGCTTCCTTCAGAGGGTCTGTGGGTCCTCTCAGTATTaGTGGTTTGTTCTTGCAGTCGATCTGGAGCTAAAA +
Preference number: 3 (lower is better)
Translates to: RFLQRVCGSSQY*WFVLAVDLELK
Trigger: TTTTAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGACCCTCTGAAGGAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 72 bp AAAGAAAAGAGCTTGGTTCTTCCCCTCTGTGGATTCTaGACATGGGATTTGTGCCCTCTCCCAAGTTCTGGC +
Preference number: 3 (lower is better)
Translates to: KEKSLVLPLCGF*TWDLCPLPSSG
Trigger: GCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 72 bp AGCTGTGAAAGAAAAGAGCTTGGTTCTTCCCCTCTGTaGATTCTGCACATGGGATTTGTGCCCTCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: SCERKELGSSPL*ILHMGFVPSPK
Trigger: CTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 72 bp CCCTTGATGTATACCCTCCCCCTTTTCCGATGGATGTaGCTTCCTGTAAGCCAAACTGCTGTGATTGTTGTC +
Preference number: 3 (lower is better)
Translates to: PLMYTLPLFRWM*LPVSQTAVIVV
Trigger: GACAACAATCACAGCAGTTTGGCTTACAGGAAGCCACATCCATCGGAAAAGGGGGAGGGTATACATCAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR GCA 72 bp GGTGAACCAGTCGACATGGGCACGACAATGATCAAATaGATGAATAAGCTCGTGTGTGACCACTCTGTTCAT +
Preference number: 3 (lower is better)
Translates to: GEPVDMGTTMIK*MNKLVCDHSVH
Trigger: ATGAACAGAGTGGTCACACACGAGCTTATTCATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR CCA 72 bp TTCCTTCAGAGGGTCTGTGGGTCCTCTCAGTATTGCTaGTTTGTTCTTGCAGTCGATCTGGAGCTAAAATTC +
Preference number: 3 (lower is better)
Translates to: FLQRVCGSSQYC*FVLAVDLELKF
Trigger: GAATTTTAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGACCCTCTGAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CCA 72 bp TCAGTTGTGGTAGTATGGAGAAGAACTTGTGGTGAGTaGGGCCCTAGAACTCCCAAGATTGTATGCCCTTTT +
Preference number: 3 (lower is better)
Translates to: SVVVVWRRTCGE*GPRTPKIVCPF
Trigger: AAAAGGGCATACAATCTTGGGAGTTCTAGGGCCCCACTCACCACAAGTTCTTCTCCATACTACCACAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR-3UTR CAA 90 bp GAGCATATCTTGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCATGGTGCCAAATGTCTGATGTaGGTGAACCAGTCGACATGG +
Preference number: 3 (lower is better)
Translates to: EHILHKSCYVGSFQKVHGAKCLM*VNQSTW
Trigger: CCATGTCGACTGGTTCACCAACATCAGACATTTGGC...ACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR GCA 72 bp CCGATCACGGTTTTCAAAGTCTCTGTGAGCATATCTTaGATAAGTCTTGTTATGTGGGATCCTTCCAAAAGG +
Preference number: 3 (lower is better)
Translates to: PITVFKVSVSIS*ISLVMWDPSKR
Trigger: CCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGTGATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR-3UTR CAA 90 bp GAGCATATCTTGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCATGGTAACCTGAATATTTCATaGACAAGTGAGCAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: EHILHKSCYVGSFQKVHGNLNIS*TSEQSP
Trigger: TGGAGACTGCTCACTTGTCAATGAAATATTCAGGTT...ACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR CCA 72 bp GTCTCTGTGAGCATATCTTGCATAAGTCTTGTTATGTaGGATCCTTCCAAAAGGTTCATGGTCATTGAAACA +
Preference number: 3 (lower is better)
Translates to: VSVSISCISLVM*DPSKRFMVIET
Trigger: TGTTTCAATGACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTCACAGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR-3UTR CAA 90 bp TCTGTGAGCATATCTTGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCTTTTTAGCTACTTCTTaGCTGATATTCCTAACAGCC +
Preference number: 3 (lower is better)
Translates to: SVSISCISLVMWDPSKRFFLATS*LIFLTA
Trigger: GGCTGTTAGGAATATCAGCAAAGAAGTAGCTAAAAA...GAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTCACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR CCA 72 bp AATGTAAATACCAACAGTGGTCACCTATCAACATCATaGAAGAGCACACTTCACAGGTTTCATAATCAAATT +
Preference number: 3 (lower is better)
Translates to: NVNTNSGHLSTS*KSTLHRFHNQI
Trigger: AATTTGATTATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR GCA 90 bp TCTTCTGGGTCTAGCCACCCAGTGAGTCTACCCAGCTCCATGCTGGTACTGGGGCCGGAGCTCCCGCCATaGCTCCCGCAGACCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SSGSSHPVSLPSSMLVLGPELPP*LPQTSP
Trigger: CGGCGAGGTCTGCGGGAGGCATGGCGGGAGCTCCGG...CCCCAGTACCAGCATGGAGCTGGGTAGACTCACTGGGTGGCTAGACCCAGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGTGTTGCTGCTGCAGCTaGTCCCCTGCCGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: YDCLWGVMQVVREVGESRCCCCS*SPAAGP
Trigger: GGGCCCCGCGGCAGGGGAGCAGCTGCAGCAGCAACA...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp GGAAGTAGGGGAAAGCCGGCAGTCACAGGCCTCACCCAGCTCCCACACAAGCCGCCACAGCCCCAAGTCTaGTTCCAGGTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSRGKPAVTGLTQLPHKPPQPQV*FQVVGE
Trigger: CTCACCCACCACCTGGAAGCAGACTTGGGGCTGTGG...CGGCTTGTGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCTACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCGAGACGTGTTGCTGCTaGAGCTGCTCCCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPETCCC*SCSPAA
Trigger: CGCGGCAGGGGAGCAGCTGCAGCAGCAACACGTCTC...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp GGAAGTAGGGGAAAGCCGGCAGTCACAGGCCTCACCCAGCTCCCACACAAGCCGTGGCAAGAGACGTGTTaGTGCTGCAGCTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GSRGKPAVTGLTQLPHKPWQETC*CCSCSP
Trigger: AGGGGAGCAGCTGCAGCAGCAACACGTCTCTTGCCA...CGGCTTGTGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCTACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp GGCCTCCTGCCAGGAGGTAGCGCTTTCCAGAGAGCATCAGTTGTGGTAGTATGGGCCGCTGCTTCCTCCTaGCTCAGGCGGCCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: GLLPGGSAFQRASVVVVWAAASS*LRRPER
Trigger: TCGCTCTGGCCGCCTGAGCCAGGAGGAAGCAGCGGC...CCATACTACCACAACTGATGCTCTCTGGAAAGCGCTACCTCCTGGCAGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GGAAGTAGGGGAAAGCCGGCAGTCACAGGCCTCACCCAGCTCCCACACAAGCCGAATGGATCTCTGTGGTaGCAGGCAGGAATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSRGKPAVTGLTQLPHKPNGSLW*QAGMGC
Trigger: GCAGCCCATTCCTGCCTGTCACCACAGAGATCCATT...CGGCTTGTGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCTACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GGAAGTAGGGGAAAGCCGGCAGTCACAGGCCTCACCCAGCTCCCACACAAGCCGTGGGTGAGACAGGCTTaGAAACTTGCCCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GSRGKPAVTGLTQLPHKPWVRQA*KLAPGY
Trigger: GTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCA...CGGCTTGTGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCTACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp CCCGCTGCTCTTCTGGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGCAGGAACAGGAATGGGCTGCTTaGGGACCCAGCGAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PAALLAALAMDLCGDRQEQEWAA*GPSELP
Trigger: AGGGAGCTCGCTGGGTCCCCAAGCAGCCCATTCCTG...TTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GGAAGTAGGGGAAAGCCGGCAGTCACAGGCCTCACCCAGCTCCCACACAAGCCGCCCACCTCCCAGCTGTaGAAGAAAAGAGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSRGKPAVTGLTQLPHKPPTSQL*KKRAWF
Trigger: GAACCAAGCTCTTTTCTTTCACAGCTGGGAGGTGGG...CGGCTTGTGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCTACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 72 bp TGGGGACCCAGCGAGCTCCCTGGGCCTTCCTGCTGCTaGCTCTACCCCTGTATTTCGCTCGGCTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: WGPSELPGPSCC*LYPCISLGSLN
Trigger: ATTTAGAGAGCCGAGCGAAATACAGGGGTAGAGCAAGCAGCAGGAAGGCCCAGGGAGCTCGCTGGGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGGGTCTAGCCACCCAGTaGGTCTACCCAGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: YDCLWGVMQVVREVGESRGLATQ*VYPAPC
Trigger: GCATGGAGCTGGGTAGACTCACTGGGTGGCTAGACC...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGCGCAGACCTCGCCGCTaGTTCCTCCTGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: PLPSSGREASCPIEIVTKRRPRR*FLLAQA
Trigger: CGCCTGAGCCAGGAGGAAGCAGCGGCGAGGTCTGCG...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp TTCCCCTCTGTGGATTCTGCACATGGGATTTGTGCCCTCTCCCAAGTTCTGGCCTGCTGGCTGGCCTCCTaGCAGGAGGTAGCGCTTTCC +
Preference number: 4 (lower is better)
Translates to: FPSVDSAHGICALSQVLACWLAS*QEVALS
Trigger: GGAAAGCGCTACCTCCTGGCAGGAGGCCAGCCAGCA...GGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp CCCGCTGCTCTTCTGGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGCAGGAAGTCTACCCAGCTCCATaGTGGTACTGGGGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: PAALLAALAMDLCGDRQEVYPAP*WYWGLP
Trigger: AGGCAACCCCCAGTACCAGCATGGAGCTGGGTAGAC...TTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp CCCGCTGCTCTTCTGGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGCAGGAACCTTGCACTGGGCTTTaGCTTTCTCTGGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PAALLAALAMDLCGDRQEPCTGL*LSLVPP
Trigger: GGGAGGCACCAGAGAAAGGCAAAGCCCAGTGCAAGG...TTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGCGCTCGGGGAAGACCTaGCAAGAGACGTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: YDCLWGVMQVVREVGESRRSGKT*QETCCC
Trigger: GCAGCAACACGTCTCTTGCCAGGTCTTCCCCGAGCG...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGGGGCAGGTCTTGCTGTaGCTGTTGTGGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: YDCLWGVMQVVREVGESRGQVLL*LLWEMR
Trigger: CCTCATCTCCCACAACAGTCACAGCAAGACCTGCCC...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp GGACCCAGCGAGCTCCCTGGGCCTTCCTGCTGCTTGCTCTACCCCTGTATTTCGGGCCGGGAGGCTTCTTaGCCCATTGAAATAGTTACA +
Preference number: 4 (lower is better)
Translates to: GPSELPGPSCCLLYPCISGREAS*PIEIVT
Trigger: TGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCC...CGAAATACAGGGGTAGAGCAAGCAGCAGGAAGGCCCAGGGAGCTCGCTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 72 bp GTGGGAGAGGAGGGTCTCCCTTTCCCACTTCTGCAGTaGGGCACTCACAGTATTTGGGGTGTCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VGEEGLPFPLLQ*GTHSIWGVSWA
Trigger: TGCCCAGGAGACACCCCAAATACTGTGAGTGCCCAACTGCAGAAGTGGGAAAGGGAGACCCTCCTCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp GGCCTCCTGCCAGGAGGTAGCGCTTTCCAGAGAGCATCAGTTGTGGTAGTATGGCCTGGGCCTTCCTGCTaGTTGCTCTACCCCTGTATT +
Preference number: 4 (lower is better)
Translates to: GLLPGGSAFQRASVVVVWPGPSC*LLYPCI
Trigger: AATACAGGGGTAGAGCAAGCAGCAGGAAGGCCCAGG...CCATACTACCACAACTGATGCTCTCTGGAAAGCGCTACCTCCTGGCAGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp GGCCTCCTGCCAGGAGGTAGCGCTTTCCAGAGAGCATCAGTTGTGGTAGTATGGTACCCGCTGCTCTTCTaGCTGCCCTTGCAATGGATC +
Preference number: 4 (lower is better)
Translates to: GLLPGGSAFQRASVVVVWYPLLF*LPLQWI
Trigger: GATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGGTA...CCATACTACCACAACTGATGCTCTCTGGAAAGCGCTACCTCCTGGCAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 72 bp CCTGTGGAGTTTTACCCGCTGCTCTTCTGGCTGCCCTaGCAATGGATCTCTGTGGTGACAGGCAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: PVEFYPLLFWLP*QWISVVTGRNG
Trigger: CCCATTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGGTAAAACTCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCACTTCTGGTTGCTGGTaGAGAAGCTGGAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPTSGCW*RSWRRT
Trigger: GGTTCTTCTCCAGCTTCTTCACCAGCAACCAGAAGT...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GGCCTCCTGCCAGGAGGTAGCGCTTTCCAGAGAGCATCAGTTGTGGTAGTATGGAGCAGCTCGAACCTCTaGGCACGCCAAATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: GLLPGGSAFQRASVVVVWSSSNL*ARQMSD
Trigger: ATCAGACATTTGGCGTGCTCAGAGGTTCGAGCTGCT...CCATACTACCACAACTGATGCTCTCTGGAAAGCGCTACCTCCTGGCAGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGCCGGAGCTCCCGCCATaGCTCCCGCAGACCTCGCCG +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQPELPP*LPQTSP
Trigger: CGGCGAGGTCTGCGGGAGGCATGGCGGGAGCTCCGG...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR GCA 90 bp GGCCTCCTGCCAGGAGGTAGCGCTTTCCAGAGAGCATCAGTTGTGGTAGTATGGTCCTTGGGCAGGTCTTaGTGTGACTGTTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLLPGGSAFQRASVVVVWSLGRS*CDCCGR
Trigger: TCTCCCACAACAGTCACAGCAAGACCTGCCCAAGGA...CCATACTACCACAACTGATGCTCTCTGGAAAGCGCTACCTCCTGGCAGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp TCTTCTGGGTCTAGCCACCCAGTGAGTCTACCCAGCTCCATGCTGGTACTGGGGTCCCACTTCTGCAGTTaGGCACTCACAGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: SSGSSHPVSLPSSMLVLGSHFCS*ALTVFG
Trigger: CCCAAATACTGTGAGTGCCCAACTGCAGAAGTGGGA...CCCCAGTACCAGCATGGAGCTGGGTAGACTCACTGGGTGGCTAGACCCAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp CCCGCTGCTCTTCTGGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGCAGGAATGTGGATTCTGCACATaGGATTTGTGCCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PAALLAALAMDLCGDRQECGFCT*DLCPLP
Trigger: TGGGAGAGGGCACAAATCCCATGTGCAGAATCCACA...TTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 72 bp TTGGTTCTTCCCCTCTGTGGATTCTGCACATGGGATTaGTGCCCTCTCCCAAGTTCTGGCCGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LVLPLCGFCTWD*CPLPSSGREAS
Trigger: AGAAGCCTCCCGGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAAGAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GGAAGTAGGGGAAAGCCGGCAGTCACAGGCCTCACCCAGCTCCCACACAAGCCGAACTATCTGAGATGTTaGAGCATCAAAACCTCCACT +
Preference number: 4 (lower is better)
Translates to: GSRGKPAVTGLTQLPHKPNYLRC*SIKTST
Trigger: AGTGGAGGTTTTGATGCTTCAACATCTCAGATAGTT...CGGCTTGTGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCTACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp GGAAGTAGGGGAAAGCCGGCAGTCACAGGCCTCACCCAGCTCCCACACAAGCCGTCAGGGATTTCTTCTTaGTTTGAATCCATTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSRGKPAVTGLTQLPHKPSGISS*FESIAG
Trigger: ACCAGCAATGGATTCAAACCAAGAAGAAATCCCTGA...CGGCTTGTGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCTACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GGACCCAGCGAGCTCCCTGGGCCTTCCTGCTGCTTGCTCTACCCCTGTATTTCGCATCAAGCAGAAGTTTaGCATATGGATTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPSELPGPSCCLLYPCISHQAEV*HMDLSP
Trigger: TGGAGACAAATCCATATGTCAAACTTCTGCTTGATG...CGAAATACAGGGGTAGAGCAAGCAGCAGGAAGGCCCAGGGAGCTCGCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATGAGACGTGTTGCTGCTaGAGCTGCTCCCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHETCCC*SCSPAA
Trigger: CGCGGCAGGGGAGCAGCTGCAGCAGCAACACGTCTC...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGCCGCTGCTTCCTCCTaGCTCAGGCGGCCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQAAASS*LRRPER
Trigger: TCGCTCTGGCCGCCTGAGCCAGGAGGAAGCAGCGGC...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGGGTTCTTCCCCTCTGTaGATTCTGCACATGGGATTT +
Preference number: 4 (lower is better)
Translates to: YDCLWGVMQVVREVGESRGSSPL*ILHMGF
Trigger: AAATCCCATGTGCAGAATCCACAGAGGGGAAGAACC...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGGCTCTATTTTTGTGCTaGCTGGCCTCCTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPSSGREASCPIEIVTKALFLC*LASCQE
Trigger: CTCCTGGCAGGAGGCCAGCCAGCACAAAAATAGAGC...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 72 bp CAGGCTACCCACCTCCCAGCTGTGAAAGAAAAGAGCTaGGTTCTTCCCCTCTGTGGATTCTGCACATGGGAT +
Preference number: 4 (lower is better)
Translates to: QATHLPAVKEKS*VLPLCGFCTWD
Trigger: ATCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCACAGCTGGGAGGTGGGTAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GCACGCCAAATGTCTGATGTTGGTGAACCAGTCGACATGGGCACGACAATGATCAGCAGCTCGAACCTCTaGGCACGCCAAATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: ARQMSDVGEPVDMGTTMISSSNL*ARQMSD
Trigger: ATCAGACATTTGGCGTGCTCAGAGGTTCGAGCTGCT...GATCATTGTCGTGCCCATGTCGACTGGTTCACCAACATCAGACATTTGGCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR GCA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGTGCACATGGGATTTGTaGCCTCTCCCAAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PLPSSGREASCPIEIVTKCTWDL*PLPSSG
Trigger: GCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCA...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCTCCTGTAAGCCAAACTaGTGTGATTGTTGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPSCKPN*CDCCLS
Trigger: AGAGAGACAACAATCACAGCAGTTTGGCTTACAGGA...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCTCCTCTCAGTATTGCTaGTTTGTTCTTGCAGTCGAT +
Preference number: 4 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPSSQYC*FVLAVD
Trigger: ATCGACTGCAAGAACAAACCAGCAATACTGAGAGGA...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCACCCAGCGAGCTCCCTaGGCCTTCCTGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFTQRAP*AFLLLA
Trigger: AGCAAGCAGCAGGAAGGCCCAGGGAGCTCGCTGGGT...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp TCTTCTGGGTCTAGCCACCCAGTGAGTCTACCCAGCTCCATGCTGGTACTGGGGCATCAAAACCTCCACTaGCATTTCCATTACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSGSSHPVSLPSSMLVLGHQNLH*HFHYSL
Trigger: AAGACTGTAATGGAAATGTCAGTGGAGGTTTTGATG...CCCCAGTACCAGCATGGAGCTGGGTAGACTCACTGGGTGGCTAGACCCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCAGCTCTCCATTTCCTTaGATATTTCTCCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPSSPFP*IFLPSL
Trigger: AAGTGAAGGGAGAAATATTCAAGGAAATGGAGAGCT...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCCAAGAGACGTGTTGCTaGTGCAGCTGCTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFQETCC*CSCSPA
Trigger: GGCAGGGGAGCAGCTGCAGCAGCAACACGTCTCTTG...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR GCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCCTCCCTGGGCCTTCCTaGTGCTTGCTCTACCCCTGT +
Preference number: 4 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFLPGPS*CLLYPC
Trigger: ACAGGGGTAGAGCAAGCAGCAGGAAGGCCCAGGGAG...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTCTCACTCCCACCATaGCCCCCACCACAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQVSLPP*PPPQPQ
Trigger: TTGGGGCTGTGGTGGGGGGCATGGTGGGAGTGAGAC...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATCGCTCGGGGAAGACCTaGCAAGAGACGTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHRSGKT*QETCCC
Trigger: GCAGCAACACGTCTCTTGCCAGGTCTTCCCCGAGCG...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGCTAAGCTGGCACTTCTaGTTGCTGGTGAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLPSSGREASCPIEIVTKLSWHF*LLVKKL
Trigger: CAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAG...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp AGCTGTGAAAGAAAAGAGCTTGGTTCTTCCCCTCTGTGGATTCTGCACATGGGAGGCACTCACAGTATTTaGGGTGTCTCCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SCERKELGSSPLWILHMGGTHSI*GVSWAL
Trigger: CAGTGCCCAGGAGACACCCCAAATACTGTGAGTGCC...TCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGCCCTCTCCCAAGTTCTaGCCGGGAGGCTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQPSPKF*PGGFLP
Trigger: GGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGGG...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp AGCTGTGAAAGAAAAGAGCTTGGTTCTTCCCCTCTGTGGATTCTGCACATGGGACTTCCAGGTGGTGGGTaGGACAGGCTTGAAAACTTG +
Preference number: 4 (lower is better)
Translates to: SCERKELGSSPLWILHMGLPGGG*DRLENL
Trigger: CAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAG...TCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp GTCTGTGGGTCCTCTCAGTATTGCTGGTTTGTTCTTGCAGTCGATCTGGAGCTAGTGCAATGGACTCCATaGGGGTTCTTAGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: VCGSSQYCWFVLAVDLELVQWTP*GFLALV
Trigger: CACCAAAGCTAAGAACCCTCATGGAGTCCATTGCAC...TAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACGCAGACCTCGCCGCTaGTTCCTCCTGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTRRPRR*FLLAQA
Trigger: CGCCTGAGCCAGGAGGAAGCAGCGGCGAGGTCTGCG...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR GCA 90 bp CCCGCTGCTCTTCTGGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGCAGGAATCTGTGAGCATATCTTaGATAAGTCTTGTTATGTGG +
Preference number: 4 (lower is better)
Translates to: PAALLAALAMDLCGDRQESVSIS*ISLVMW
Trigger: CCACATAACAAGACTTATGCAAGATATGCTCACAGA...TTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCGAGAAGAACCCTTGCTaGGGATTCCCCTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFEKNPC*GFPWAR
Trigger: TCTGGCCCAGGGGAATCCCCAGCAAGGGTTCTTCTC...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCATAAGTCTTGTTATGTaGGATCCTTCCAAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPISLVM*DPSKRF
Trigger: GAACCTTTTGGAAGGATCCCACATAACAAGACTTAT...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 72 bp TCGCTTCCTTCAGAGGGTCTGTGGGTCCTCTCAGTATaGCTGGTTTGTTCTTGCAGTCGATCTGGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: SLPSEGLWVLSV*LVCSCSRSGAK
Trigger: TTTAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGACCCTCTGAAGGAAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 72 bp GAACTTGTGGTGAGTGGGGCCCTAGAACTCCCAAGATaGTATGCCCTTTTTGTTCAGATACCAGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: ELVVSGALELPR*YALFVQIPGWV
Trigger: TACCCACCCTGGTATCTGAACAAAAAGGGCATACAATCTTGGGAGTTCTAGGGCCCCACTCACCACAAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp TTCCCCTCTGTGGATTCTGCACATGGGATTTGTGCCCTCTCCCAAGTTCTGGCCCGCACACAAGTCTGGTaGTGTTGTTTTAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: FPSVDSAHGICALSQVLARTQVW*CCFNPK
Trigger: TTTTGGATTAAAACAACACCACCAGACTTGTGTGCG...GGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp ACCAGGGTTAGTTTTCTGGTTCCTTCTCATTTGGGTAGTCTCTGTCAAAGGGAAGCTCCATGCTGGTACTaGGGGTTGCCTGCACAGAAT +
Preference number: 4 (lower is better)
Translates to: TRVSFLVPSHLGSLCQREAPCWY*GLPAQN
Trigger: ATTCTGTGCAGGCAACCCCCAGTACCAGCATGGAGC...TTCCCTTTGACAGAGACTACCCAAATGAGAAGGAACCAGAAAACTAACCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGGTTAACAGCACAACCTaGGTGTTTCATAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: PLPSSGREASCPIEIVTKVNSTT*VFHSIK
Trigger: CTTGATGCTATGAAACACTCAGGTTGTGCTGTTAAC...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp TTCCCCTCTGTGGATTCTGCACATGGGATTTGTGCCCTCTCCCAAGTTCTGGCCTGGCACAAAACTATCTaGGATGTTGAAGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: FPSVDSAHGICALSQVLAWHKTI*DVEASK
Trigger: TTTTGATGCTTCAACATCTCAGATAGTTTTGTGCCA...GGCCAGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAATCCACAGAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGCTTAGCTTTGGTGGTTaGAGGCTCTATTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PLPSSGREASCPIEIVTKLSFGG*RLYFCA
Trigger: AGCACAAAAATAGAGCCTTCAACCACCAAAGCTAAG...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCCCCCTCTGTGGATTCTaGACATGGGATTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFPLCGF*TWDLCP
Trigger: AGGGCACAAATCCCATGTGCAGAATCCACAGAGGGG...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGACAGGCTTGAAAACTTaGCCCAGGCTACCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQTGLKT*PRLPTS
Trigger: GGAGGTGGGTAGCCTGGGGCAAGTTTTCAAGCCTGT...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp GAACCAGTCGACATGGGCACGACAATGATCAAATGCATGAATAAGCTCGTGTGTCTAAGCTGGCACTTCTaGTTGCTGGTGAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EPVDMGTTMIKCMNKLVCLSWHF*LLVKKL
Trigger: CAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAG...ACACACGAGCTTATTCATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR GCA 90 bp TTGACAAGTGAGCAGTCTCCACTAAGGTTAGCAGCTCGAACCTCTGAGCACGCCACGACAATGATCAAATaGATGAATAAGCTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: LTSEQSPLRLAARTSEHATTMIK*MNKLVC
Trigger: ACACACGAGCTTATTCATGCATTTGATCATTGTCGT...GGCGTGCTCAGAGGTTCGAGCTGCTAACCTTAGTGGAGACTGCTCACTTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR GCA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGACTCCCAAGATTGTATaGCCTTTTTGTTCAGATACC +
Preference number: 4 (lower is better)
Translates to: PLPSSGREASCPIEIVTKTPKIV*PFCSDT
Trigger: GGTATCTGAACAAAAAGGGCATACAATCTTGGGAGT...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp GTCTGTGGGTCCTCTCAGTATTGCTGGTTTGTTCTTGCAGTCGATCTGGAGCTATCTCGCACACAAGTCTaGTGGTGTTGTTTTAATCCA +
Preference number: 4 (lower is better)
Translates to: VCGSSQYCWFVLAVDLELSRTQV*WCCFNP
Trigger: TGGATTAAAACAACACCACCAGACTTGTGTGCGAGA...TAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGAGCTCAGACTCTCCTTaGGCAGGTCTTGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQSSDSP*AGLAVT
Trigger: AGTCACAGCAAGACCTGCCCAAGGAGAGTCTGAGCT...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGACTTCTGGTTGCTGGTaGAGAAGCTGGAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQTSGCW*RSWRRT
Trigger: GGTTCTTCTCCAGCTTCTTCACCAGCAACCAGAAGT...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR TCA 90 bp GTCTGTGGGTCCTCTCAGTATTGCTGGTTTGTTCTTGCAGTCGATCTGGAGCTACTGTTCATATGGGCCTaGTTATGGATATTATTCTGG +
Preference number: 4 (lower is better)
Translates to: VCGSSQYCWFVLAVDLELLFIWA*LWILFW
Trigger: CCAGAATAATATCCATAATCAGGCCCATATGAACAG...TAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACATGGCAAGAGACGTGTTaGTGCTGCAGCTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTWQETC*CCSCSP
Trigger: AGGGGAGCAGCTGCAGCAGCAACACGTCTCTTGCCA...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGCTAAGCTGGCACTTCTaGTTGCTGGTGAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQLSWHF*LLVKKL
Trigger: CAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAG...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGATTATGACTGCCTCTaGGGAGTCATGCAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQDYDCL*GVMQVV
Trigger: GACAACCTGCATGACTCCCCAGAGGCAGTCATAATC...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTCAGATACCAGGGTaGGTAGGGAAGGAACATCAG +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQVQIPG*VGKEHQ
Trigger: CTGATGTTCCTTCCCTACCCACCCTGGTATCTGAAC...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 72 bp CATATTACCAGGGTTAGTTTTCTGGTTCCTTCTCATTaGGGTAGTCTCTGTCAAAGGGAAGGTCTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HITRVSFLVPSH*GSLCQREGLGL
Trigger: CAGCCCTAGACCTTCCCTTTGACAGAGACTACCCAAATGAGAAGGAACCAGAAAACTAACCCTGGTAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp TCTGTGAGCATATCTTGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCACTTCTGGTTGCTGGTaGAGAAGCTGGAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: SVSISCISLVMWDPSKRFTSGCW*RSWRRT
Trigger: GGTTCTTCTCCAGCTTCTTCACCAGCAACCAGAAGT...GAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR TCA 90 bp ACGGTTTTCAAAGTCTCTGTGAGCATATCTTGCATAAGTCTTGTTATGTGGGATAGCAGCTCGAACCTCTaGGCACGCCAAATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: TVFKVSVSISCISLVMWDSSSNL*ARQMSD
Trigger: ATCAGACATTTGGCGTGCTCAGAGGTTCGAGCTGCT...ATCCCACATAACAAGACTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATCACCTATCAACATCATaGAAGAGCACACTTCACAGG +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHHLSTS*KSTLHR
Trigger: CCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTG...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCCACCTATCAACATCATaGAAGAGCACACTTCACAGG +
Preference number: 4 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFHLSTS*KSTLHR
Trigger: CCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTG...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR TCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATGTTAACAGCACAACCTaGGTGTTTCATAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHVNSTT*VFHSIK
Trigger: CTTGATGCTATGAAACACTCAGGTTGTGCTGTTAAC...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR TCA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACAAGCAGCTCGAACCTCTaGGCACGCCAAATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTSSSNL*ARQMSD
Trigger: ATCAGACATTTGGCGTGCTCAGAGGTTCGAGCTGCT...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR TCA 90 bp ATGTCTGATGTTGGTGAACCAGTCGACATGGGCACGACAATGATCAAATGCATGTATTTCATTGACAAGTaGGCAGTCTCCACTAAGGTT +
Preference number: 4 (lower is better)
Translates to: MSDVGEPVDMGTTMIKCMYFIDK*AVSTKV
Trigger: AACCTTAGTGGAGACTGCTCACTTGTCAATGAAATA...CATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTCACCAACATCAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp ACGGTTTTCAAAGTCTCTGTGAGCATATCTTGCATAAGTCTTGTTATGTGGGATCTAAGCTGGCACTTCTaGTTGCTGGTGAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TVFKVSVSISCISLVMWDLSWHF*LLVKKL
Trigger: CAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAG...ATCCCACATAACAAGACTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp GAACCAGTCGACATGGGCACGACAATGATCAAATGCATGAATAAGCTCGTGTGTCGCACACAAGTCTGGTaGTGTTGTTTTAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: EPVDMGTTMIKCMNKLVCRTQVW*CCFNPK
Trigger: TTTTGGATTAAAACAACACCACCAGACTTGTGTGCG...ACACACGAGCTTATTCATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATTCTCGCACACAAGTCTaGTGGTGTTGTTTTAATCCA +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHSRTQV*WCCFNP
Trigger: TGGATTAAAACAACACCACCAGACTTGTGTGCGAGA...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR TCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATCATCAAAACCTCCACTaGCATTTCCATTACAGTCTT +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHHQNLH*HFHYSL
Trigger: AAGACTGTAATGGAAATGTCAGTGGAGGTTTTGATG...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR TCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCAACTATCTGAGATGTTaGAGCATCAAAACCTCCACT +
Preference number: 4 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFNYLRC*SIKTST
Trigger: AGTGGAGGTTTTGATGCTTCAACATCTCAGATAGTT...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR TCA 90 bp AGCTACTTCTTTGCTGATATTCCTAACAGCCAGGATAGAAAGAGTGGCTCTGTCCTGTTCATATGGGCCTaGTTATGGATATTATTCTGG +
Preference number: 4 (lower is better)
Translates to: SYFFADIPNSQDRKSGSVLFIWA*LWILFW
Trigger: CCAGAATAATATCCATAATCAGGCCCATATGAACAG...GACAGAGCCACTCTTTCTATCCTGGCTGTTAGGAATATCAGCAAAGAAGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR TCA 90 bp ACCAGGGTTAGTTTTCTGGTTCCTTCTCATTTGGGTAGTCTCTGTCAAAGGGAATATTTCATTGACAAGTaGGCAGTCTCCACTAAGGTT +
Preference number: 4 (lower is better)
Translates to: TRVSFLVPSHLGSLCQREYFIDK*AVSTKV
Trigger: AACCTTAGTGGAGACTGCTCACTTGTCAATGAAATA...TTCCCTTTGACAGAGACTACCCAAATGAGAAGGAACCAGAAAACTAACCCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATTATTTCATTGACAAGTaGGCAGTCTCCACTAAGGTT +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHYFIDK*AVSTKV
Trigger: AACCTTAGTGGAGACTGCTCACTTGTCAATGAAATA...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR GCA 90 bp ATGTCTGATGTTGGTGAACCAGTCGACATGGGCACGACAATGATCAAATGCATGTCTGTGAGCATATCTTaGATAAGTCTTGTTATGTGG +
Preference number: 4 (lower is better)
Translates to: MSDVGEPVDMGTTMIKCMSVSIS*ISLVMW
Trigger: CCACATAACAAGACTTATGCAAGATATGCTCACAGA...CATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTCACCAACATCAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp GATGTTGGTGAACCAGTCGACATGGGCACGACAATGATCAAATGCATGAATAAGCGCACACAAGTCTGGTaGTGTTGTTTTAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: DVGEPVDMGTTMIKCMNKRTQVW*CCFNPK
Trigger: TTTTGGATTAAAACAACACCACCAGACTTGTGTGCG...CTTATTCATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTCACCAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp GAACCAGTCGACATGGGCACGACAATGATCAAATGCATGAATAAGCTCGTGTGTATAAGTCTTGTTATGTaGGATCCTTCCAAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: EPVDMGTTMIKCMNKLVCISLVM*DPSKRF
Trigger: GAACCTTTTGGAAGGATCCCACATAACAAGACTTAT...ACACACGAGCTTATTCATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACAATGTCCTTCTCCCTGTaGAGTTTTACCCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTMSFSL*SFTRCS
Trigger: AGAGCAGCGGGTAAAACTCCACAGGGAGAAGGACAT...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGTCAGTTGTGGTAGTATaGAGAAGAACTTGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQSVVVV*RRTCGE
Trigger: CTCACCACAAGTTCTTCTCCATACTACCACAACTGA...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
3UTR CAA 72 bp ACCGATCACGGTTTTCAAAGTCTCTGTGAGCATATCTaGCATAAGTCTTGTTATGTGGGATCCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TDHGFQSLCEHI*HKSCYVGSFQK
Trigger: CTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGTGATCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR TCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATTGGCACAAAACTATCTaGGATGTTGAAGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHWHKTI*DVEASK
Trigger: TTTTGATGCTTCAACATCTCAGATAGTTTTGTGCCA...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR GCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCACGACAATGATCAAATaGATGAATAAGCTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFTTMIK*MNKLVC
Trigger: ACACACGAGCTTATTCATGCATTTGATCATTGTCGT...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR GCA 90 bp TGCATGAATAAGCTCGTGTGTGACCACTCTGTTCATATGGGCCTGATTATGGATACGACAATGATCAAATaGATGAATAAGCTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: CMNKLVCDHSVHMGLIMDTTMIK*MNKLVC
Trigger: ACACACGAGCTTATTCATGCATTTGATCATTGTCGT...ATCCATAATCAGGCCCATATGAACAGAGTGGTCACACACGAGCTTATTCATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR GCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATTCTGTGAGCATATCTTaGATAAGTCTTGTTATGTGG +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHSVSIS*ISLVMW
Trigger: CCACATAACAAGACTTATGCAAGATATGCTCACAGA...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGCGCACACAAGTCTGGTaGTGTTGTTTTAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQRTQVW*CCFNPK
Trigger: TTTTGGATTAAAACAACACCACCAGACTTGTGTGCG...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp AGCTACTTCTTTGCTGATATTCCTAACAGCCAGGATAGAAAGAGTGGCTCTGTCATAAGTCTTGTTATGTaGGATCCTTCCAAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SYFFADIPNSQDRKSGSVISLVM*DPSKRF
Trigger: GAACCTTTTGGAAGGATCCCACATAACAAGACTTAT...GACAGAGCCACTCTTTCTATCCTGGCTGTTAGGAATATCAGCAAAGAAGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp ATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATAAGTCTTGTTATGTaGGATCCTTCCAAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: IPTVVTYQHHGRAHFTGFISLVM*DPSKRF
Trigger: GAACCTTTTGGAAGGATCCCACATAACAAGACTTAT...GAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACATGGATTTCCTTGCACTaGGCTTTGCCTTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTWISLH*ALPFSG
Trigger: ACCAGAGAAAGGCAAAGCCCAGTGCAAGGAAATCCA...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR GCA 90 bp ACAATGATCAAATGCATGAATAAGCTCGTGTGTGACCACTCTGTTCATATGGGCTCTGTGAGCATATCTTaGATAAGTCTTGTTATGTGG +
Preference number: 4 (lower is better)
Translates to: TMIKCMNKLVCDHSVHMGSVSIS*ISLVMW
Trigger: CCACATAACAAGACTTATGCAAGATATGCTCACAGA...GCCCATATGAACAGAGTGGTCACACACGAGCTTATTCATGCATTTGATCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp AAAGTCTCTGTGAGCATATCTTGCATAAGTCTTGTTATGTGGGATCCTTCCAAATCTCGCACACAAGTCTaGTGGTGTTGTTTTAATCCA +
Preference number: 4 (lower is better)
Translates to: KVSVSISCISLVMWDPSKSRTQV*WCCFNP
Trigger: TGGATTAAAACAACACCACCAGACTTGTGTGCGAGA...TTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTCACAGAGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CCA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATCTTCTCTGTTTTATCTaGATTGTAGGGATTGTTTAC +
Preference number: 4 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHLLCFI*IVGIVY
Trigger: GTAAACAATCCCTACAATCCAGATAAAACAGAGAAG...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CCA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACCAGGGTTAGTTTTCTaGTTCCTTCTCATTTGGGTA +
Preference number: 4 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTPGLVF*FLLIWV
Trigger: TACCCAAATGAGAAGGAACCAGAAAACTAACCCTGG...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR TCA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACATCAAGCAGAAGTTTaGCATATGGATTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTHQAEV*HMDLSP
Trigger: TGGAGACAAATCCATATGTCAAACTTCTGCTTGATG...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR TCA 90 bp TTGAATAATACCGATCACGGTTTTCAAAGTCTCTGTGAGCATATCTTGCATAAGCTGTTCATATGGGCCTaGTTATGGATATTATTCTGG +
Preference number: 4 (lower is better)
Translates to: LNNTDHGFQSLCEHILHKLFIWA*LWILFW
Trigger: CCAGAATAATATCCATAATCAGGCCCATATGAACAG...CTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGTGATCGGTATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR TCA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTGTTCATATGGGCCTaGTTATGGATATTATTCTGG +
Preference number: 4 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTLFIWA*LWILFW
Trigger: CCAGAATAATATCCATAATCAGGCCCATATGAACAG...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR TCA 90 bp TTGAATAATACCGATCACGGTTTTCAAAGTCTCTGTGAGCATATCTTGCATAAGTATTTCATTGACAAGTaGGCAGTCTCCACTAAGGTT +
Preference number: 4 (lower is better)
Translates to: LNNTDHGFQSLCEHILHKYFIDK*AVSTKV
Trigger: AACCTTAGTGGAGACTGCTCACTTGTCAATGAAATA...CTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGTGATCGGTATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
3UTR CAA 72 bp TCAAAAACTTCATCAACAGCCTTTTTAGCTACTTCTTaGCTGATATTCCTAACAGCCAGGATAGAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: SKTSSTAFLATS*LIFLTARIERV
Trigger: CACTCTTTCTATCCTGGCTGTTAGGAATATCAGCAAAGAAGTAGCTAAAAAGGCTGTTGATGAAGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS GCA 90 bp GCGCTCGTCCGGAGCTCCCGCCATGCCTCCCGCAGACCTCGCCGCTaGTTCCTCCTGGCTCAGGCGGCCAGAGCGAGACTGGGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: ALVRSSRHASRRPRR*FLLAQAARARLGKV
Trigger: TACCTTTCCCAGTCTCGCTCTGGCCGCCTGAGCCAGGAGGAAGCAGCGGCGAGGTCTGCGGGAGGCATGGCGGGAGCTCCGGACGAGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300145.4
ENST00000551997.1
ENST00000571490.1
ENST00000576795.1
CDS-3UTR CAA 90 bp TATGACTGCCTCTGGGGAGTCATGCAGGTTGTCAGGGAAGTAGGGGAAAGCCGGGCAGGAATGGGCTGCTaGGGGACCCAGCGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: YDCLWGVMQVVREVGESRAGMGC*GTQRAP
Trigger: GGGAGCTCGCTGGGTCCCCAAGCAGCCCATTCCTGC...CCGGCTTTCCCCTACTTCCCTGACAACCTGCATGACTCCCCAGAGGCAGTCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp GGCCTCCTGCCAGGAGGTAGCGCTTTCCAGAGAGCATCAGTTGTGGTAGTATGGCTGGCAAGAGACGTGTaGCTGCTGCAGCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: GLLPGGSAFQRASVVVVWLARDV*LLQLLP
Trigger: GGGGAGCAGCTGCAGCAGCAACACGTCTCTTGCCAG...CCATACTACCACAACTGATGCTCTCTGGAAAGCGCTACCTCCTGGCAGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp GGAAGTAGGGGAAAGCCGGCAGTCACAGGCCTCACCCAGCTCCCACACAAGCCGGTGAAAGAAAAGAGCTaGGTTCTTCCCCTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: GSRGKPAVTGLTQLPHKPVKEKS*VLPLCG
Trigger: TCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCAC...CGGCTTGTGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCTACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp GTCTGTGGGTCCTCTCAGTATTGCTGGTTTGTTCTTGCAGTCGATCTGGAGCTAGCTGGAGAAGAACCCTaGCTGGGGATTCCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: VCGSSQYCWFVLAVDLELAGEEP*LGIPLG
Trigger: GCCCAGGGGAATCCCCAGCAAGGGTTCTTCTCCAGC...TAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp CCCGCTGCTCTTCTGGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGCAGGAATTCTGCACATGGGATTaGTGCCCTCTCCCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PAALLAALAMDLCGDRQEFCTWD*CPLPSS
Trigger: AGAACTTGGGAGAGGGCACAAATCCCATGTGCAGAA...TTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp GGCCTCCTGCCAGGAGGTAGCGCTTTCCAGAGAGCATCAGTTGTGGTAGTATGGGCCAAATGTCTGATGTaGGTGAACCAGTCGACATGG +
Preference number: 5 (lower is better)
Translates to: GLLPGGSAFQRASVVVVWAKCLM*VNQSTW
Trigger: CCATGTCGACTGGTTCACCAACATCAGACATTTGGC...CCATACTACCACAACTGATGCTCTCTGGAAAGCGCTACCTCCTGGCAGGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGGAGCTCAGACTCTCCTaGGGCAGGTCTTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: PLPSSGREASCPIEIVTKELRLS*GRSCCD
Trigger: GTCACAGCAAGACCTGCCCAAGGAGAGTCTGAGCTC...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS CCA 90 bp AACAGCATTGTCTCCAGCGTCTTCAGGAGCCTAAGCTGGCACTTCTaGTTGCTGGTGAAGAAGCTGGAGAAGAACCCTTGCTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: NSIVSSVFRSLSWHF*LLVKKLEKNPCWGF
Trigger: GAATCCCCAGCAAGGGTTCTTCTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAATGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551997.1
ENST00000576795.1
CDS-3UTR CAA 90 bp ATGTCTGATGTTGGTGAACCAGTCGACATGGGCACGACAATGATCAAATGCATGGCTGGAGAAGAACCCTaGCTGGGGATTCCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: MSDVGEPVDMGTTMIKCMAGEEP*LGIPLG
Trigger: GCCCAGGGGAATCCCCAGCAAGGGTTCTTCTCCAGC...CATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTCACCAACATCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp GTCTGTGGGTCCTCTCAGTATTGCTGGTTTGTTCTTGCAGTCGATCTGGAGCTAGGGCCTTCCTGCTGCTaGCTCTACCCCTGTATTTCG +
Preference number: 5 (lower is better)
Translates to: VCGSSQYCWFVLAVDLELGPSCC*LYPCIS
Trigger: CGAAATACAGGGGTAGAGCAAGCAGCAGGAAGGCCC...TAGCTCCAGATCGACTGCAAGAACAAACCAGCAATACTGAGAGGACCCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGGTGGGTGAGACAGGCTaGAAAACTTGCCCCAGGCTA +
Preference number: 5 (lower is better)
Translates to: PLPSSGREASCPIEIVTKVGETG*KTCPRL
Trigger: TAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCAC...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp GGAAGTAGGGGAAAGCCGGCAGTCACAGGCCTCACCCAGCTCCCACACAAGCCGACTTGTTCAATTCTATaGCTGAGATTTTCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GSRGKPAVTGLTQLPHKPTCSIL*LRFSRA
Trigger: TGCTCTGGAAAATCTCAGCAATAGAATTGAACAAGT...CGGCTTGTGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCTACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS CCA 90 bp TATGGATTTGTCTCCAGCGTCTTCAGGAGCCTAAGCTGGCACTTCTaGTTGCTGGTGAAGAAGCTGGAGAAGAACCCTTGCTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: YGFVSSVFRSLSWHF*LLVKKLEKNPCWGF
Trigger: GAATCCCCAGCAAGGGTTCTTCTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAAATCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS CCA 90 bp AAACTATTTGTCTCCAGCGTCTTCAGGAGCCTAAGCTGGCACTTCTaGTTGCTGGTGAAGAAGCTGGAGAAGAACCCTTGCTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: KLFVSSVFRSLSWHF*LLVKKLEKNPCWGF
Trigger: GAATCCCCAGCAAGGGTTCTTCTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAAATAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGCTGGCAAGAGACGTGTaGCTGCTGCAGCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQLARDV*LLQLLP
Trigger: GGGGAGCAGCTGCAGCAGCAACACGTCTCTTGCCAG...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp CCCGCTGCTCTTCTGGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGCAGGAAGAAAAGTGTCTATCTTaGTTAACAGCACAACCTGAG +
Preference number: 5 (lower is better)
Translates to: PAALLAALAMDLCGDRQEEKCLS*LTAQPE
Trigger: CTCAGGTTGTGCTGTTAACAAAGATAGACACTTTTC...TTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp CCCGCTGCTCTTCTGGCTGCCCTTGCAATGGATCTCTGTGGTGACAGGCAGGAAAACCTGAATATTTCATaGACAAGTGAGCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PAALLAALAMDLCGDRQENLNIS*TSEQSP
Trigger: TGGAGACTGCTCACTTGTCAATGAAATATTCAGGTT...TTCCTGCCTGTCACCACAGAGATCCATTGCAAGGGCAGCCAGAAGAGCAGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp GTCTGCTTCCAGGTGGTGGGTGAGACAGGCTTGAAAACTTGCCCCAGGCTACCCGGTGTTAAAGAGCTTTaGTTTTGTCATATTACCAGG +
Preference number: 5 (lower is better)
Translates to: VCFQVVGETGLKTCPRLPGVKEL*FCHITR
Trigger: CCTGGTAATATGACAAAACAAAAGCTCTTTAACACC...GGGTAGCCTGGGGCAAGTTTTCAAGCCTGTCTCACCCACCACCTGGAAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp ACCAGGGTTAGTTTTCTGGTTCCTTCTCATTTGGGTAGTCTCTGTCAAAGGGAAAGCTGGCACTTCTGGTaGCTGGTGAAGAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TRVSFLVPSHLGSLCQRESWHFW*LVKKLE
Trigger: CTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCT...TTCCCTTTGACAGAGACTACCCAAATGAGAAGGAACCAGAAAACTAACCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp TGCATGAATAAGCTCGTGTGTGACCACTCTGTTCATATGGGCCTGATTATGGATAGCTGGCACTTCTGGTaGCTGGTGAAGAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CMNKLVCDHSVHMGLIMDSWHFW*LVKKLE
Trigger: CTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCT...ATCCATAATCAGGCCCATATGAACAGAGTGGTCACACACGAGCTTATTCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATAGCTGGCACTTCTGGTaGCTGGTGAAGAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHSWHFW*LVKKLE
Trigger: CTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCT...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp GGCCTCCTGCCAGGAGGTAGCGCTTTCCAGAGAGCATCAGTTGTGGTAGTATGGTTTTTAGCTACTTCTTaGCTGATATTCCTAACAGCC +
Preference number: 5 (lower is better)
Translates to: GLLPGGSAFQRASVVVVWFLATS*LIFLTA
Trigger: GGCTGTTAGGAATATCAGCAAAGAAGTAGCTAAAAA...CCATACTACCACAACTGATGCTCTCTGGAAAGCGCTACCTCCTGGCAGGAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp ATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCATGGTCATTGAAACAAGAGCTGGAGAAGAACCCTaGCTGGGGATTCCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ISLVMWDPSKRFMVIETRAGEEP*LGIPLG
Trigger: GCCCAGGGGAATCCCCAGCAAGGGTTCTTCTCCAGC...TCTTGTTTCAATGACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp ACAATGATCAAATGCATGAATAAGCTCGTGTGTGACCACTCTGTTCATATGGGCAGCTGGCACTTCTGGTaGCTGGTGAAGAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TMIKCMNKLVCDHSVHMGSWHFW*LVKKLE
Trigger: CTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCT...GCCCATATGAACAGAGTGGTCACACACGAGCTTATTCATGCATTTGATCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp ATGTCTGATGTTGGTGAACCAGTCGACATGGGCACGACAATGATCAAATGCATGGCCAAATGTCTGATGTaGGTGAACCAGTCGACATGG +
Preference number: 5 (lower is better)
Translates to: MSDVGEPVDMGTTMIKCMAKCLM*VNQSTW
Trigger: CCATGTCGACTGGTTCACCAACATCAGACATTTGGC...CATGCATTTGATCATTGTCGTGCCCATGTCGACTGGTTCACCAACATCAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp CCTCTCCCAAGTTCTGGCCGGGAGGCTTCTTGCCCCATTGAAATAGTTACAAAGGGATTTCTTCTTGGTTaGAATCCATTGCTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: PLPSSGREASCPIEIVTKGFLLG*NPLLVN
Trigger: GTTCACCAGCAATGGATTCAAACCAAGAAGAAATCC...CTTTGTAACTATTTCAATGGGGCAAGAAGCCTCCCGGCCAGAACTTGGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp AGTGAGCAGTCTCCACTAAGGTTAGCAGCTCGAACCTCTGAGCACGCCAAATGTAACCTGAATATTTCATaGACAAGTGAGCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SEQSPLRLAARTSEHAKCNLNIS*TSEQSP
Trigger: TGGAGACTGCTCACTTGTCAATGAAATATTCAGGTT...ACATTTGGCGTGCTCAGAGGTTCGAGCTGCTAACCTTAGTGGAGACTGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp TTGACAAGTGAGCAGTCTCCACTAAGGTTAGCAGCTCGAACCTCTGAGCACGCCTTTTTAGCTACTTCTTaGCTGATATTCCTAACAGCC +
Preference number: 5 (lower is better)
Translates to: LTSEQSPLRLAARTSEHAFLATS*LIFLTA
Trigger: GGCTGTTAGGAATATCAGCAAAGAAGTAGCTAAAAA...GGCGTGCTCAGAGGTTCGAGCTGCTAACCTTAGTGGAGACTGCTCACTTGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp GCACGCCAAATGTCTGATGTTGGTGAACCAGTCGACATGGGCACGACAATGATCCTCTGTGAGCATATCTaGCATAAGTCTTGTTATGTG +
Preference number: 5 (lower is better)
Translates to: ARQMSDVGEPVDMGTTMILCEHI*HKSCYV
Trigger: CACATAACAAGACTTATGCAAGATATGCTCACAGAG...GATCATTGTCGTGCCCATGTCGACTGGTTCACCAACATCAGACATTTGGCGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp AGCTGTGAAAGAAAAGAGCTTGGTTCTTCCCCTCTGTGGATTCTGCACATGGGACTAGAACTCCCAAGATaGTATGCCCTTTTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: SCERKELGSSPLWILHMGLELPR*YALFVQ
Trigger: CTGAACAAAAAGGGCATACAATCTTGGGAGTTCTAG...TCCCATGTGCAGAATCCACAGAGGGGAAGAACCAAGCTCTTTTCTTTCACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS-3UTR CAA 90 bp ACAATGATCAAATGCATGAATAAGCTCGTGTGTGACCACTCTGTTCATATGGGCCTGGCACAAAACTATTaGTCTCCAGCGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: TMIKCMNKLVCDHSVHMGLAQNY*SPASSG
Trigger: TCCTGAAGACGCTGGAGACAAATAGTTTTGTGCCAG...GCCCATATGAACAGAGTGGTCACACACGAGCTTATTCATGCATTTGATCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATGCATCAAGCAGAAGTTaGACATATGGATTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHASSRS*TYGFVS
Trigger: GGAGACAAATCCATATGTCAAACTTCTGCTTGATGC...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp TGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGCATCAAGCAGAAGTTaGACATATGGATTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: CKYQQWSPINIMEEHTSQASSRS*TYGFVS
Trigger: GGAGACAAATCCATATGTCAAACTTCTGCTTGATGC...CTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp ATAAGTCTTGTTATGTGGGATCCTTCCAAAAGGTTCATGGTCATTGAAACAAGAGCCAAATGTCTGATGTaGGTGAACCAGTCGACATGG +
Preference number: 5 (lower is better)
Translates to: ISLVMWDPSKRFMVIETRAKCLM*VNQSTW
Trigger: CCATGTCGACTGGTTCACCAACATCAGACATTTGGC...TCTTGTTTCAATGACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACAGCCAAATGTCTGATGTaGGTGAACCAGTCGACATGG +
Preference number: 5 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTAKCLM*VNQSTW
Trigger: CCATGTCGACTGGTTCACCAACATCAGACATTTGGC...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp AGCTACTTCTTTGCTGATATTCCTAACAGCCAGGATAGAAAGAGTGGCTCTGTCAACCTGAATATTTCATaGACAAGTGAGCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SYFFADIPNSQDRKSGSVNLNIS*TSEQSP
Trigger: TGGAGACTGCTCACTTGTCAATGAAATATTCAGGTT...GACAGAGCCACTCTTTCTATCCTGGCTGTTAGGAATATCAGCAAAGAAGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATCTCTGTGAGCATATCTaGCATAAGTCTTGTTATGTG +
Preference number: 5 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHLCEHI*HKSCYV
Trigger: CACATAACAAGACTTATGCAAGATATGCTCACAGAG...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp ACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTTCACAGGTTTCATTTTTTAGCTACTTCTTaGCTGATATTCCTAACAGCC +
Preference number: 5 (lower is better)
Translates to: TNSGHLSTSWKSTLHRFHFLATS*LIFLTA
Trigger: GGCTGTTAGGAATATCAGCAAAGAAGTAGCTAAAAA...ATGAAACCTGTGAAGTGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp TTGAATAATACCGATCACGGTTTTCAAAGTCTCTGTGAGCATATCTTGCATAAGCTGGCACAAAACTATTaGTCTCCAGCGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LNNTDHGFQSLCEHILHKLAQNY*SPASSG
Trigger: TCCTGAAGACGCTGGAGACAAATAGTTTTGTGCCAG...CTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGTGATCGGTATTATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp ACAATGATCAAATGCATGAATAAGCTCGTGTGTGACCACTCTGTTCATATGGGCTTTTTAGCTACTTCTTaGCTGATATTCCTAACAGCC +
Preference number: 5 (lower is better)
Translates to: TMIKCMNKLVCDHSVHMGFLATS*LIFLTA
Trigger: GGCTGTTAGGAATATCAGCAAAGAAGTAGCTAAAAA...GCCCATATGAACAGAGTGGTCACACACGAGCTTATTCATGCATTTGATCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp ACGGTTTTCAAAGTCTCTGTGAGCATATCTTGCATAAGTCTTGTTATGTGGGATCTCTGTGAGCATATCTaGCATAAGTCTTGTTATGTG +
Preference number: 5 (lower is better)
Translates to: TVFKVSVSISCISLVMWDLCEHI*HKSCYV
Trigger: CACATAACAAGACTTATGCAAGATATGCTCACAGAG...ATCCCACATAACAAGACTTATGCAAGATATGCTCACAGAGACTTTGAAAACCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS-3UTR CAA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACAGAAAAGTGTCTATCTTaGTTAACAGCACAACCTGAG +
Preference number: 5 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTEKCLS*LTAQPE
Trigger: CTCAGGTTGTGCTGTTAACAAAGATAGACACTTTTC...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACAAACCTGAATATTTCATaGACAAGTGAGCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTNLNIS*TSEQSP
Trigger: TGGAGACTGCTCACTTGTCAATGAAATATTCAGGTT...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACACTCTGTGAGCATATCTaGCATAAGTCTTGTTATGTG +
Preference number: 5 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTLCEHI*HKSCYV
Trigger: CACATAACAAGACTTATGCAAGATATGCTCACAGAG...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS-3UTR CAA 90 bp ACATTTAATGTAAATACCAACAGTGGTCACCTATCAACATCATGGAAGAGCACATTCTTATATCATTTTTaGGATTTCCTTGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: TFNVNTNSGHLSTSWKSTFLYHF*DFLALG
Trigger: GCCCAGTGCAAGGAAATCCAAAAAATGATATAAGAA...TGTGCTCTTCCATGATGTTGATAGGTGACCACTGTTGGTATTTACATTAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300145.4
CDS GCA 72 bp CGGGGCCCCGCCGGCGCTCGTCCGGAGCTCCCGCCATaGCTCCCGCAGACCTCGCCGCTGCTTCCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: RGPAGARPELPP*LPQTSPLLPPG
Trigger: GCCAGGAGGAAGCAGCGGCGAGGTCTGCGGGAGGCATGGCGGGAGCTCCGGACGAGCGCCGGCGGGGCCCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300145.4
ENST00000551997.1
ENST00000571490.1
ENST00000576795.1
CDS GCA 72 bp CGGAGCTCCCGCCATGCCTCCCGCAGACCTCGCCGCTaGTTCCTCCTGGCTCAGGCGGCCAGAGCGAGACTG +
Preference number: 6 (lower is better)
Translates to: RSSRHASRRPRR*FLLAQAARARL
Trigger: CAGTCTCGCTCTGGCCGCCTGAGCCAGGAGGAAGCAGCGGCGAGGTCTGCGGGAGGCATGGCGGGAGCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300145.4
ENST00000551997.1
ENST00000571490.1
ENST00000576795.1
CDS CCA 72 bp TGGTTGCTGGTGAAGAAGCTGGAGAAGAACCCTTGCTaGGGATTCCCCTGGGCCAGACGCTCGGGGAAGACC +
Preference number: 6 (lower is better)
Translates to: WLLVKKLEKNPC*GFPWARRSGKT
Trigger: GGTCTTCCCCGAGCGTCTGGCCCAGGGGAATCCCCAGCAAGGGTTCTTCTCCAGCTTCTTCACCAGCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300145.4
ENST00000551997.1
ENST00000571490.1
ENST00000576795.1
CDS CAA 90 bp GGATTTGTCTCCAGCGTCTTCAGGAGCCTAAGCTGGCACTTCTGGTaGCTGGTGAAGAAGCTGGAGAAGAACCCTTGCTGGGGATTCCCC +
Preference number: 6 (lower is better)
Translates to: GFVSSVFRSLSWHFW*LVKKLEKNPCWGFP
Trigger: GGGGAATCCCCAGCAAGGGTTCTTCTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS CAA 90 bp AGCATTGTCTCCAGCGTCTTCAGGAGCCTAAGCTGGCACTTCTGGTaGCTGGTGAAGAAGCTGGAGAAGAACCCTTGCTGGGGATTCCCC +
Preference number: 6 (lower is better)
Translates to: SIVSSVFRSLSWHFW*LVKKLEKNPCWGFP
Trigger: GGGGAATCCCCAGCAAGGGTTCTTCTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551997.1
ENST00000576795.1
CDS CAA 90 bp CTATTTGTCTCCAGCGTCTTCAGGAGCCTAAGCTGGCACTTCTGGTaGCTGGTGAAGAAGCTGGAGAAGAACCCTTGCTGGGGATTCCCC +
Preference number: 6 (lower is better)
Translates to: LFVSSVFRSLSWHFW*LVKKLEKNPCWGFP
Trigger: GGGGAATCCCCAGCAAGGGTTCTTCTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS CCA 72 bp AACAGCATTGTCTCCAGCGTCTTCAGGAGCCTAAGCTaGCACTTCTGGTTGCTGGTGAAGAAGCTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: NSIVSSVFRSLS*HFWLLVKKLEK
Trigger: CTTCTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAATGCTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551997.1
ENST00000576795.1
CDS CCA 72 bp TATGGATTTGTCTCCAGCGTCTTCAGGAGCCTAAGCTaGCACTTCTGGTTGCTGGTGAAGAAGCTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: YGFVSSVFRSLS*HFWLLVKKLEK
Trigger: CTTCTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAAATCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300145.4
ENST00000571490.1
CDS CCA 72 bp AAACTATTTGTCTCCAGCGTCTTCAGGAGCCTAAGCTaGCACTTCTGGTTGCTGGTGAAGAAGCTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: KLFVSSVFRSLS*HFWLLVKKLEK
Trigger: CTTCTCCAGCTTCTTCACCAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAAATAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS CAA 72 bp GCACAACCTGAGTGTTTCATAGCATCAAGCAGAAGTTaGACATATGGATCTCAGGTAGAGGGGGCCATTCTG +
Preference number: 6 (lower is better)
Translates to: AQPECFIASSRS*TYGSQVEGAIL
Trigger: CAGAATGGCCCCCTCTACCTGAGATCCATATGTCAAACTTCTGCTTGATGCTATGAAACACTCAGGTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647763.1
CDS CAA 90 bp TTGTTAACAGCACAACCTGAGTGTTTCATAGCATCAAGCAGAAGTTaGACATATGGATCTCAGGTAGAGGGGGCCATTCTGACATCTGTC +
Preference number: 6 (lower is better)
Translates to: LLTAQPECFIASSRS*TYGSQVEGAILTSV
Trigger: GACAGATGTCAGAATGGCCCCCTCTACCTGAGATCCATATGTCAAACTTCTGCTTGATGCTATGAAACACTCAGGTTGTGCTGTTAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647763.1
CDS CAA 72 bp TTTCCATTACAGTCTTCGCAAGAAAAGTGTCTATCTTaGTTAACAGCATTGTCTCCAGCGTCTTCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: FPLQSSQEKCLS*LTALSPASSGA
Trigger: GGCTCCTGAAGACGCTGGAGACAATGCTGTTAACAAAGATAGACACTTTTCTTGCGAAGACTGTAATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551997.1
ENST00000576795.1
CDS TCA 72 bp AAACTATCTGAGATGTTGAAGCATCAAAACCTCCACTaGCATTTCCATTACAGTCTTCGCAAGAAAAGTGTC +
Preference number: 6 (lower is better)
Translates to: KLSEMLKHQNLH*HFHYSLRKKSV
Trigger: GACACTTTTCTTGCGAAGACTGTAATGGAAATGTCAGTGGAGGTTTTGATGCTTCAACATCTCAGATAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300145.4
ENST00000551997.1
ENST00000571490.1
ENST00000576795.1
ENST00000647763.1
CDS TCA 72 bp ATAAGCTCGTGTGTGACCACTCTGTTCATATGGGCCTaGTTATGGATATTATTCTGGCACAAAACTATTTGT +
Preference number: 6 (lower is better)
Translates to: ISSCVTTLFIWA*LWILFWHKTIC
Trigger: ACAAATAGTTTTGTGCCAGAATAATATCCATAATCAGGCCCATATGAACAGAGTGGTCACACACGAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549257.5
ENST00000570321.5
CDS TCA 72 bp ATAAGCTCGTGTGTGACCACTCTGTTCATATGGGCCTaGTTATGGATATTATTCTGGCACAAAAACATTTCA +
Preference number: 6 (lower is better)
Translates to: ISSCVTTLFIWA*LWILFWHKNIS
Trigger: TGAAATGTTTTTGTGCCAGAATAATATCCATAATCAGGCCCATATGAACAGAGTGGTCACACACGAGCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546709.1
ENST00000574747.1