RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP1B4 (Homo sapiens)

Ensembl gene IDs: ENSG00000101892

Ensembl transcript IDs: ENST00000218008.8, ENST00000361319.3, ENST00000539306.5

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATTCCACAGTCTTGTCCTTCTCCAATCACCCTTCACATAGTGGTTaGCAAGTGCCCTTTCTAAATTGCAAGCCGGGTGCGGTGGCTCAC +
Preference number: 1 (lower is better)
Translates to: HSTVLSFSNHPSHSG*QVPFLNCKPGAVAH
Trigger: GTGAGCCACCGCACCCGGCTTGCAATTTAGAAAGGGCACTTGGCAACCACTATGTGAAGGGTGATTGGAGAAGGACAAGACTGTGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR GCA 90 bp CAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGGATCTCTTaGCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGTTACAT +
Preference number: 1 (lower is better)
Translates to: QSPLSIPEYLSSWIS*HPCHSSEPFSFQLH
Trigger: ATGTAACTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CCA 90 bp CCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTTaGCTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTA +
Preference number: 1 (lower is better)
Translates to: PHVIFKVNAKLANGP*LLPGLARNVLSCHV
Trigger: TACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR TCA 90 bp CTTGTTAGTAGTGGTTGGCCTCCCTTTACTGTGTCAATAAGACTTTaGAGGTGTCTGGGAAGGAGATTCCAAAGAGGAACAGCAATTCTT +
Preference number: 1 (lower is better)
Translates to: LVSSGWPPFTVSIRL*RCLGRRFQRGTAIL
Trigger: AAGAATTGCTGTTCCTCTTTGGAATCTCCTTCCCAGACACCTTCAAAGTCTTATTGACACAGTAAAGGGAGGCCAACCACTACTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR GCA 90 bp CAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTaGCTGAAGCTGAGAAAAACCTGTTTGCAGGAATGTTTGCCTTTA +
Preference number: 1 (lower is better)
Translates to: QEELAGGNLLPCCLL*LKLRKTCLQECLPL
Trigger: TAAAGGCAAACATTCCTGCAAACAGGTTTTTCTCAGCTTCAGGCAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CCA 90 bp ACATCATGCTACTGTCAAACAAATAGCCCAAGAAGAATTAGCTGGTaGGAATCTTCTTCCATGTTGTCTCCTCTGCCTGAAGCTGAGAAA +
Preference number: 1 (lower is better)
Translates to: TSCYCQTNSPRRISW*ESSSMLSPLPEAEK
Trigger: TTTCTCAGCTTCAGGCAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATTTGTTTGACAGTAGCATGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CCA 90 bp AAAACATCATGCTACTGTCAAACAAATAGCCCAAGAAGAATTAGCTaGTGGGAATCTTCTTCCATGTTGTCTCCTCTGCCTGAAGCTGAG +
Preference number: 1 (lower is better)
Translates to: KTSCYCQTNSPRRIS*WESSSMLSPLPEAE
Trigger: CTCAGCTTCAGGCAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATTTGTTTGACAGTAGCATGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR GCA 90 bp TTAAATAGCTTAAAATTTCTTAAGCGAGTTCCCTTAACCCAATGTTaGTTTTGTTCTCATCTTTCCTTCTCACCAACCCTACATGTGTTT +
Preference number: 1 (lower is better)
Translates to: LNSLKFLKRVPLTQC*FCSHLSFSPTLHVF
Trigger: AAACACATGTAGGGTTGGTGAGAAGGAAAGATGAGAACAAAAGCAACATTGGGTTAAGGGAACTCGCTTAAGAAATTTTAAGCTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGATGGGCCTTGGCTTTTaGCTGGCCTGGCAAGGAACG +
Preference number: 2 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQMGLGF*LAWQGT
Trigger: CGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGCCCAT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGAGTGTTCTCCCCAGTTaGAGTGAGCCCCACCTCTTT +
Preference number: 2 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQSVLPS*SEPHLF
Trigger: AAAGAGGTGGGGCTCACTGCAACTGGGGAGAACACT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGGGCTTTTGCCTGGCCTaGCAAGGAACGTTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQGFCLA*QGTFCL
Trigger: AAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAGCC...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCAGGTGGGACTACAGATaGATGCCACCACACCCGGCT +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVRWDYR*MPPHPA
Trigger: AGCCGGGTGTGGTGGCATGCATCTGTAGTCCCACCT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCGCCTTGGCTTTTGCCTaGCCTGGCAAGGAACGTTCT +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVALAFA*PGKERS
Trigger: AGAACGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGC...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CAA 90 bp AGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTaGTCCTTCTCCAATCACCCTTCACATAGTGGTTGCCAAGTGCCC +
Preference number: 2 (lower is better)
Translates to: SHSPNSSFLIPHSTV*SFSNHPSHSGCQVP
Trigger: GGGCACTTGGCAACCACTATGTGAAGGGTGATTGGAGAAGGACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGATAGGCAAGGAAAGATaGTCGGCTGTCTTAGATGTC +
Preference number: 2 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQIGKER*SAVLDV
Trigger: GACATCTAAGACAGCCGATCATCTTTCCTTGCCTAT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGTTGGATCCTCCTAGGTaGCATTTAAACTTGCTTCGG +
Preference number: 2 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQLDPPR*HLNLLR
Trigger: CCGAAGCAAGTTTAAATGCCACCTAGGAGGATCCAA...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTCCCTGCCATTCCTCTaGGCCCTTTTCATTCCAGTT +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVSLPFL*ALFIPV
Trigger: AACTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCGAATACCTCTCTAGCTaGATCTCTTGCCATCCCTGC +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVEYLSS*ISCHPC
Trigger: GCAGGGATGGCAAGAGATCCAGCTAGAGAGGTATTC...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTAGGTGGGACTACAGATaGATGCCACCACACCCGGCT +
Preference number: 2 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCRWDYR*MPPHPA
Trigger: AGCCGGGTGTGGTGGCATGCATCTGTAGTCCCACCT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGTATAACTTCTCCACTTaGTTGTCTTCACTACCAGAC +
Preference number: 2 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQYNFST*LSSLPD
Trigger: GTCTGGTAGTGAAGACAAGCAAGTGGAGAAGTTATA...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CAA 90 bp ATCAACAATGTCACCATCTTACCGGTTCTAGCCAAGCTCAAACCTTaGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCAC +
Preference number: 2 (lower is better)
Translates to: INNVTILPVLAKLKP*ESFSKLLLPYSPFH
Trigger: GTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAAAGGTTTGAGCTTGGCTAGAACCGGTAAGATGGTGACATTGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTGGTTGGGAGGAATCTaGCCTCTAAAACCAACAGAA +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVWLGGI*PLKPTE
Trigger: TTCTGTTGGTTTTAGAGGTCAGATTCCTCCCAACCA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCTCCCTGCCATTCCTCTaGGCCCTTTTCATTCCAGTT +
Preference number: 2 (lower is better)
Translates to: SLIFPVLINNVTILPVLASLPFL*ALFIPV
Trigger: AACTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGA...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGCTCCTTGATGGCTATTaGGTGGCTATTGTAAATTTT +
Preference number: 2 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQLLDGY*VAIVNF
Trigger: AAAATTTACAATAGCCACGCAATAGCCATCAAGGAG...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGAATACCTCTCTAGCTaGATCTCTTGCCATCCCTGC +
Preference number: 2 (lower is better)
Translates to: SLIFPVLINNVTILPVLAEYLSS*ISCHPC
Trigger: GCAGGGATGGCAAGAGATCCAGCTAGAGAGGTATTC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CAA 90 bp TGTCTCCTCTGCCTGAAGCTGAGAAAAACCTGTTTGCAGGAATGTTaGCCTTTAGACGATTACACCAGAGAGCAAGGAATCAAACACCAA +
Preference number: 2 (lower is better)
Translates to: CLLCLKLRKTCLQEC*PLDDYTREQGIKHQ
Trigger: TTGGTGTTTGATTCCTTGCTCTCTGGTGTAATCGTCTAAAGGCAAACATTCCTGCAAACAGGTTTTTCTCAGCTTCAGGCAGAGGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CAA 90 bp ACAAATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTaGTCTCCTCTGCCTGAAGCTGAGAAAAACCTGTTTGCAGGAATG +
Preference number: 2 (lower is better)
Translates to: TNSPRRISWWESSSM*SPLPEAEKNLFAGM
Trigger: CATTCCTGCAAACAGGTTTTTCTCAGCTTCAGGCAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCCTGTGGCTTTGCATGTaGAATTTCCTCTGCTACTTT +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVLWLCM*NFLCYF
Trigger: AAAGTAGCAGAGGAAATTTCACATGCAAAGCCACAG...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGTCCTGGATAAGAATCTaGCTCATGTCATTTTTAAAG +
Preference number: 2 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQSWIRI*LMSFLK
Trigger: CTTTAAAAATGACATGAGGCAGATTCTTATCCAGGA...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTCCAGTTACATAAACTaGTCACAGTTACCCAGACAC +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVSSYIN*SQLPRH
Trigger: GTGTCTGGGTAACTGTGAGCAGTTTATGTAACTGGA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CAA 90 bp TTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATaGACAGATTATGATTTCAATTTCCAGAGCTGTAGCTGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: FCLAWQGTFCLVMYS*TDYDFNFQSCSCWS
Trigger: AGACCAGCAGCTACAGCTCTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCAATAGAAATTCTCCTTaGTGGCTATTGCGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVNRNSP*WLLRGY
Trigger: ATAGCCACGCAATAGCCATCAAGGAGAATTTCTATT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAAATAGAAATTCTCCTTaGTGGCTATTGCGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRNRNSP*WLLRGY
Trigger: ATAGCCACGCAATAGCCATCAAGGAGAATTTCTATT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTACTTGCTTCGGACCCTaGGACACTATACTATTCGCT +
Preference number: 2 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLATCFGP*DTILFA
Trigger: AGCGAATAGTATAGTGTCTCAGGGTCCGAAGCAAGT...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAGAAAAAGAATTCAGGTaGTACCAGAGATACCATGAG +
Preference number: 2 (lower is better)
Translates to: LLPGLARNVLSCHVFIDREKEFR*YQRYHE
Trigger: CTCATGGTATCTCTGGTAGCACCTGAATTCTTTTTC...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCGAAAAAGAATTCAGGTaGTACCAGAGATACCATGAG +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVEKEFR*YQRYHE
Trigger: CTCATGGTATCTCTGGTAGCACCTGAATTCTTTTTC...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTCCATGTTGTCTCCTCTaGCTGAAGCTGAGAAAAACC +
Preference number: 2 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAPCCLL*LKLRKT
Trigger: GGTTTTTCTCAGCTTCAGGCAGAGGAGACAACATGG...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTATAACTTCTCCACTTaGTTGTCTTCACTACCAGAC +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVYNFST*LSSLPD
Trigger: GTCTGGTAGTGAAGACAAGCAAGTGGAGAAGTTATA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CAA 90 bp GTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTTGGCTTTaGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATT +
Preference number: 2 (lower is better)
Translates to: VIFKVNAKLANGPWL*PGLARNVLSCHVFI
Trigger: AATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCCTACCAGAGATACCATaGGATAAAACAGAAACAGAA +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVLPEIP*DKTETE
Trigger: TTCTGTTTCTGTTTTATCTCATGGTATCTCTGGTAG...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTTGGTTGGGAGGAATCTaGCCTCTAAAACCAACAGAA +
Preference number: 2 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAWLGGI*PLKPTE
Trigger: TTCTGTTGGTTTTAGAGGTCAGATTCCTCCCAACCA...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATAGTGTTCTCCCCAGTTaGAGTGAGCCCCACCTCTTT +
Preference number: 2 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNSVLPS*SEPHLF
Trigger: AAAGAGGTGGGGCTCACTGCAACTGGGGAGAACACT...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGAGTGTTCTCCCCAGTTaGAGTGAGCCCCACCTCTTT +
Preference number: 2 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQSVLPS*SEPHLF
Trigger: AAAGAGGTGGGGCTCACTGCAACTGGGGAGAACACT...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCCCTTCACATAGTGGTTaGCAAGTGCCCTTTCTAAAT +
Preference number: 2 (lower is better)
Translates to: SLIFPVLINNVTILPVLAPSHSG*QVPFLN
Trigger: ATTTAGAAAGGGCACTTGGCAACCACTATGTGAAGG...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCCCAAGAAGAATTAGCTaGTGGGAATCTTCTTCCATG +
Preference number: 2 (lower is better)
Translates to: SLIFPVLINNVTILPVLAPRRIS*WESSSM
Trigger: CATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGG...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTTTGGATCCTCCTAGGTaGCATTTAAACTTGCTTCGG +
Preference number: 2 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLALDPPR*HLNLLR
Trigger: CCGAAGCAAGTTTAAATGCCACCTAGGAGGATCCAA...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTCTGTGGCTTTGCATGTaGAATTTCCTCTGCTACTTT +
Preference number: 2 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLALWLCM*NFLCYF
Trigger: AAAGTAGCAGAGGAAATTTCACATGCAAAGCCACAG...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGCTCCTTGATGGCTATTaGGTGGCTATTGTAAATTTT +
Preference number: 2 (lower is better)
Translates to: NSPRRISWWESSSMLSPLLLDGY*VAIVNF
Trigger: AAAATTTACAATAGCCACGCAATAGCCATCAAGGAG...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCCTCATTTTCACCTATTaGATAAAACTCAAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVLIFTY*IKLKVL
Trigger: GAGGACTTTGAGTTTTATCCAATAGGTGAAAATGAG...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGCTACCAGAGATACCATaGGATAAAACAGAAACAGAA +
Preference number: 2 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRLPEIP*DKTETE
Trigger: TTCTGTTTCTGTTTTATCTCATGGTATCTCTGGTAG...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTATAGGCAAGGAAAGATaGTCGGCTGTCTTAGATGTC +
Preference number: 2 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPIGKER*SAVLDV
Trigger: GACATCTAAGACAGCCGATCATCTTTCCTTGCCTAT...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATCCATGTTGTCTCCTCTaGCTGAAGCTGAGAAAAACC +
Preference number: 2 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNPCCLL*LKLRKT
Trigger: GGTTTTTCTCAGCTTCAGGCAGAGGAGACAACATGG...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTAGAAGAATTAGCTGGTaGGAATCTTCTTCCATGTTG +
Preference number: 2 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLARRISW*ESSSML
Trigger: CAACATGGAAGAAGATTCCCACCAGCTAATTCTTCT...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CAA 90 bp TTGGAAGTAGTATTTCTCATTGACAAGCAAGTAAAACCAAGTGCATaGCAACAGATGGCATACAAATCAAATCCTGATGCAGCACGGTAT +
Preference number: 2 (lower is better)
Translates to: LEVVFLIDKQVKPSA*QQMAYKSNPDAARY
Trigger: ATACCGTGCTGCATCAGGATTTGATTTGTATGCCATCTGTTGCAATGCACTTGGTTTTACTTGCTTGTCAATGAGAAATACTACTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
3UTR-3UTR TCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGATAGGCAAGGAAAGATaGTCGGCTGTCTTAGATGTC +
Preference number: 2 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQIGKER*SAVLDV
Trigger: GACATCTAAGACAGCCGATCATCTTTCCTTGCCTAT...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTAATAGAAATTCTCCTTaGTGGCTATTGCGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCNRNSP*WLLRGY
Trigger: ATAGCCACGCAATAGCCATCAAGGAGAATTTCTATT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR GCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTGAAAAAGAATTCAGGTaGTACCAGAGATACCATGAG +
Preference number: 2 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCEKEFR*YQRYHE
Trigger: CTCATGGTATCTCTGGTAGCACCTGAATTCTTTTTC...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCAGGAGATTCAGACTTTaGATCCTCCTAGGTGGCATT +
Preference number: 2 (lower is better)
Translates to: CEISSATFLAQDIFPHIPRRFRL*ILLGGI
Trigger: AATGCCACCTAGGAGGATCCAAAGTCTGAATCTCCT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGCCAAGAAGAATTAGCTaGTGGGAATCTTCTTCCATG +
Preference number: 2 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQPRRIS*WESSSM
Trigger: CATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGG...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTGGCTGTGTCCTAATTaGAGAAAAAGAATTCAGGTG +
Preference number: 2 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNWLCPN*RKRIQV
Trigger: CACCTGAATTCTTTTTCTTCAATTAGGACACAGCCA...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCTGGCTGTGTCCTAATTaGAGAAAAAGAATTCAGGTG +
Preference number: 2 (lower is better)
Translates to: CEISSATFLAQDIFPHIPWLCPN*RKRIQV
Trigger: CACCTGAATTCTTTTTCTTCAATTAGGACACAGCCA...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGAGAAGAATTAGCTGGTaGGAATCTTCTTCCATGTTG +
Preference number: 2 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQRRISW*ESSSML
Trigger: CAACATGGAAGAAGATTCCCACCAGCTAATTCTTCT...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATAGAAGAATTAGCTGGTaGGAATCTTCTTCCATGTTG +
Preference number: 2 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNRRISW*ESSSML
Trigger: CAACATGGAAGAAGATTCCCACCAGCTAATTCTTCT...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR TCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCCTACCAGAGATACCATaGGATAAAACAGAAACAGAA +
Preference number: 2 (lower is better)
Translates to: CEISSATFLAQDIFPHIPLPEIP*DKTETE
Trigger: TTCTGTTTCTGTTTTATCTCATGGTATCTCTGGTAG...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR GCA 72 bp GTCTTGTCCTTCTCCAATCACCCTTCACATAGTGGTTaGCAAGTGCCCTTTCTAAATTGCAAGCCGGGTGCG +
Preference number: 3 (lower is better)
Translates to: VLSFSNHPSHSG*QVPFLNCKPGA
Trigger: CGCACCCGGCTTGCAATTTAGAAAGGGCACTTGGCAACCACTATGTGAAGGGTGATTGGAGAAGGACAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTCTTGGTTGTCTAGGTaGGACCGAGTGGTGATTCCC +
Preference number: 3 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVSWLSR*DRVVIP
Trigger: GGGAATCACCACTCGGTCCAACCTAGACAACCAAGA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR GCA 72 bp CCTGAATACCTCTCTAGCTGGATCTCTTGCCATCCCTaGCATTCCTCTGAGCCCTTTTCATTCCAGTTACAT +
Preference number: 3 (lower is better)
Translates to: PEYLSSWISCHP*HSSEPFSFQLH
Trigger: ATGTAACTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGAGAGGTATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGTGTTTGCAGGAATGTTaGCCTTTAGACGATTACACC +
Preference number: 3 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQCLQEC*PLDDYT
Trigger: GGTGTAATCGTCTAAAGGCAAACATTCCTGCAAACA...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAGAATCTTCTTCCATGTaGTCTCCTCTGCCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRESSSM*SPLPEA
Trigger: AGCTTCAGGCAGAGGAGACAACATGGAAGAAGATTC...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGATTAATATACTCTGTTaGTCATCAGGAGACACTACC +
Preference number: 3 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQINILC*SSGDTT
Trigger: GGTAGTGTCTCCTGATGACAAACAGAGTATATTAAT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCAGGTGGCATTTAAACTaGCTTCGGACCCTGAGACAC +
Preference number: 3 (lower is better)
Translates to: SLIFPVLINNVTILPVLARWHLN*LRTLRH
Trigger: GTGTCTCAGGGTCCGAAGCAAGTTTAAATGCCACCT...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR TCA 72 bp AGTGGTTGGCCTCCCTTTACTGTGTCAATAAGACTTTaGAGGTGTCTGGGAAGGAGATTCCAAAGAGGAACA +
Preference number: 3 (lower is better)
Translates to: SGWPPFTVSIRL*RCLGRRFQRGT
Trigger: TGTTCCTCTTTGGAATCTCCTTCCCAGACACCTTCAAAGTCTTATTGACACAGTAAAGGGAGGCCAACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGAATCTTCTTCCATGTaGTCTCCTCTGCCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: SLIFPVLINNVTILPVLAESSSM*SPLPEA
Trigger: AGCTTCAGGCAGAGGAGACAACATGGAAGAAGATTC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCAGTCAGTTCCCTGTTTaGGGAGAAAGGAAACATTGT +
Preference number: 3 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVSQFPV*GERKHC
Trigger: ACAATGTTTCCTTTCTCCCAAAACAGGGAACTGACT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CCA 72 bp ATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTTaGCTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCT +
Preference number: 3 (lower is better)
Translates to: IFKVNAKLANGP*LLPGLARNVLS
Trigger: AGACAGAACGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACTGAGAAAAACCTGTTaGCAGGAATGTTTGCCTTTA +
Preference number: 3 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRLRKTC*QECLPL
Trigger: TAAAGGCAAACATTCCTGCAAACAGGTTTTTCTCAG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CCA 72 bp TACTGTCAAACAAATAGCCCAAGAAGAATTAGCTGGTaGGAATCTTCTTCCATGTTGTCTCCTCTGCCTGAA +
Preference number: 3 (lower is better)
Translates to: YCQTNSPRRISW*ESSSMLSPLPE
Trigger: TTCAGGCAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATTTGTTTGACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCCTGAGAAAAACCTGTTaGCAGGAATGTTTGCCTTTA +
Preference number: 3 (lower is better)
Translates to: SLIFPVLINNVTILPVLALRKTC*QECLPL
Trigger: TAAAGGCAAACATTCCTGCAAACAGGTTTTTCTCAG...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCAGGTGGCATTTAAACTaGCTTCGGACCCTGAGACAC +
Preference number: 3 (lower is better)
Translates to: CEISSATFLAQDIFPHIPRWHLN*LRTLRH
Trigger: GTGTCTCAGGGTCCGAAGCAAGTTTAAATGCCACCT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCGAATCTTCTTCCATGTaGTCTCCTCTGCCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: CEISSATFLAQDIFPHIPESSSM*SPLPEA
Trigger: AGCTTCAGGCAGAGGAGACAACATGGAAGAAGATTC...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR TCA 72 bp CCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTaGCAGATTATGATTTCAATTTCCAGAGCTGTAGCT +
Preference number: 3 (lower is better)
Translates to: PGKERSVLSCIH*QIMISISRAVA
Trigger: AGCTACAGCTCTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCGGTGTTAAGAAGCAGTaGAGTGATCAGGTGACCAAA +
Preference number: 3 (lower is better)
Translates to: CEISSATFLAQDIFPHIPGVKKQ*SDQVTK
Trigger: TTTGGTCACCTGATCACTCAACTGCTTCTTAACACC...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR GCA 72 bp GCTGACAACCCAAACTATCTTAGTACCCTTCAATATTaGTTTGCAATTGTGGACACAATGGATTCCATTGAA +
Preference number: 3 (lower is better)
Translates to: ADNPNYLSTLQY*FAIVDTMDSIE
Trigger: TTCAATGGAATCCATTGTGTCCACAATTGCAAAGCAATATTGAAGGGTACTAAGATAGTTTGGGTTGTCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
3UTR-3UTR CAA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTATTAATATACTCTGTTaGTCATCAGGAGACACTACC +
Preference number: 3 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCINILC*SSGDTT
Trigger: GGTAGTGTCTCCTGATGACAAACAGAGTATATTAAT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCCTGAGAAAAACCTGTTaGCAGGAATGTTTGCCTTTA +
Preference number: 3 (lower is better)
Translates to: CEISSATFLAQDIFPHIPLRKTC*QECLPL
Trigger: TAAAGGCAAACATTCCTGCAAACAGGTTTTTCTCAG...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCATTAATATACTCTGTTaGTCATCAGGAGACACTACC +
Preference number: 3 (lower is better)
Translates to: CEISSATFLAQDIFPHIPINILC*SSGDTT
Trigger: GGTAGTGTCTCCTGATGACAAACAGAGTATATTAAT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGCTGGCTAATGGGCCTTaGCTTTTGCCTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQLANGP*LLPGLA
Trigger: TGCCAGGCCAGGCAAAAGCCAAGGCCCATTAGCCAG...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACCTCCTCCTCCGATTTaGGCACCACCGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRPPPPI*APPSPE
Trigger: CTCGGGTGACGGTGGTGCCCAAATCGGAGGAGGAGG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGCCTTTGCCCTTCAGTTaGCACTGCACAGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQPLPFS*HCTGTA
Trigger: AGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGG...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGCTTCTGGACCGGAGTTaGCTTCTCATGGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQLLDRS*LLMAVQ
Trigger: CTGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAG...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGACCACGTCTGTAAAGTaGATTGCCACCAAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQTTSVK*IATKGD
Trigger: ATCCCCCTTGGTGGCAATGCACTTTACAGACGTGGT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGTCTAGCTGGATCTCTTaGCATCCCTGCCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQSSWIS*HPCHSS
Trigger: AGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGCCTCCTCCTCCGATTTaGGCACCACCGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRPPPPI*APPSPE
Trigger: CTCGGGTGACGGTGGTGCCCAAATCGGAGGAGGAGG...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCCCTCCTCCTCCGATTTaGGCACCACCGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAPPPPI*APPSPE
Trigger: CTCGGGTGACGGTGGTGCCCAAATCGGAGGAGGAGG...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCCTGGCTAATGGGCCTTaGCTTTTGCCTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVLANGP*LLPGLA
Trigger: TGCCAGGCCAGGCAAAAGCCAAGGCCCATTAGCCAG...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAATCAGGCTCCAACTCTaGCCTGTTCGGGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRIRLQL*PVRARN
Trigger: GTTTCTGGCCCGAACAGGTCAGAGTTGGAGCCTGAT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218008.8
CDS-3UTR GCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGATGGGCCTTGGCTTTTaGCTGGCCTGGCAAGGAACG +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLMGLGF*LAWQGT
Trigger: CGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGCCCAT...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCGTGCCCTTTCTAAATTaGAAGCCGGGTGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVVPFLN*KPGAVA
Trigger: AGCCACCGCACCCGGCTTGCAATTTAGAAAGGGCAC...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACCAGGCATTGCCTGTTaGCTGACCTTGACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRPGIAC*LTLTLF
Trigger: GAAGAGGGTCAAGGTCAGCCAACAGGCAATGCCTGG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCCCAGGCATTGCCTGTTaGCTGACCTTGACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVPGIAC*LTLTLF
Trigger: GAAGAGGGTCAAGGTCAGCCAACAGGCAATGCCTGG...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACCTTTGCCCTTCAGTTaGCACTGCACAGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRPLPFS*HCTGTA
Trigger: AGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCAGGCAGGCAATCGGGTaGGAGTTCTGGAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLARQAIG*EFWSFC
Trigger: GCAGAAGCTCCAGAACTCTCACCCGATTGCCTGCCT...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCGCTTTACCCGCTCCGTaGAGGTTGGTATATAGGGAC +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVALPAP*RLVYRD
Trigger: GTCCCTATATACCAACCTTCACGGAGCGGGTAAAGC...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000361319.3
CDS-3UTR TCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGATACAAATCAAATCCTaGTGCAGCACGGTATGGGGA +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQIQIKS*CSTVWG
Trigger: TCCCCATACCGTGCTGCATCAGGATTTGATTTGTAT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS-3UTR GCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGGCACTGCACAGGCACTaGTTGGTTCTTCACCACGTC +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLALHRH*LVLHHV
Trigger: GACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGC...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAAGTGTTCTCCCCAGTTaGAGTGAGCCCCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRSVLPS*SEPHLF
Trigger: AAAGAGGTGGGGCTCACTGCAACTGGGGAGAACACT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGAGGATGGAGCCCTTCTaGACCGGAGTTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLRMEPF*TGVAFS
Trigger: TGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCT...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCACTGTAAGGAAAGGATaGAGCCCTTCTGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVTVRKG*SPSGPE
Trigger: CTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACAGT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATCCTCATTGCCATCTTaGATGAAGTACTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRSSLPS*MKYCPG
Trigger: CCCGGGGCAGTACTTCATCCAAGATGGCAATGAGGA...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGAAAAGAAGCCGACTCTaGGTAGTAACTGATGGATCG +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQKRSRL*VVTDGS
Trigger: CGATCCATCAGTTACTACCCAGAGTCGGCTTCTTTT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGCCAAGCTCAAACCTTTaGAGTCATTCTCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQPSSNL*SHSPNS
Trigger: GGAGTTTGGAGAATGACTCCAAAGGTTTGAGCTTGG...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGGCTTTACCCGCTCCGTaGAGGTTGGTATATAGGGAC +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLALPAP*RLVYRD
Trigger: GTCCCTATATACCAACCTTCACGGAGCGGGTAAAGC...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000361319.3
CDS-3UTR TCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTCATTGCCATCTTGGATaGAGTACTGCCCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAHCHLG*STAPGD
Trigger: GTCCCCCGGGGCAGTACTTCATCCAAGATGGCAATG...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGACTCTGGGTAGTAACTaGTGGATCGGATGTCATTTT +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQTLGSN*WIGCHF
Trigger: AAAATGACATCCGATCCATCAGTTACTACCCAGAGT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATCCCTGCCATTCCTCTaGGCCCTTTTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRSLPFL*ALFIPV
Trigger: AACTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGA...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGCTTCTGGACCGGAGTTaGCTTCTCATGGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLLLDRS*LLMAVQ
Trigger: CTGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAG...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCTCTGCCACCAGGCATTaGCTGTTGGCTGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLASATRH*LLADLD
Trigger: GTCAAGGTCAGCCAACAGGCAATGCCTGGTGGCAGA...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATCTTGGATGAAGTACTaGCCCGGGGGACAATCTACA +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRSWMKY*PGGQST
Trigger: TGTAGATTGTCCCCCGGGGCAGTACTTCATCCAAGA...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGCACTGCACAGGCACTaGTTGGTTCTTCACCACGTC +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAALHRH*LVLHHV
Trigger: GACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCCCCTTCAGTTGGCACTaGACAGGCACTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAPFSWH*TGTAWF
Trigger: GAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGG...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTATGGGCCTTGGCTTTTaGCTGGCCTGGCAAGGAACG +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAMGLGF*LAWQGT
Trigger: CGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGCCCAT...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCAGGATGGAGCCCTTCTaGACCGGAGTTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLARMEPF*TGVAFS
Trigger: TGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCT...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGCCAGGCATTGCCTGTTaGCTGACCTTGACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRPGIAC*LTLTLF
Trigger: GAAGAGGGTCAAGGTCAGCCAACAGGCAATGCCTGG...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGAAACATCCTTCTCTCTaGATCCCACAGGTATTCACT +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQKHPSL*IPQVFT
Trigger: AGTGAATACCTGTGGGATCCAGAGAGAAGGATGTTT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACCGCTCCGTGAAGGTTaGTATATAGGGACTGATGGT +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRPLREG*YIGTDG
Trigger: ACCATCAGTCCCTATATACCAACCTTCACGGAGCGG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000361319.3
CDS-3UTR CCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGCCAAGAAGAATTAGCTaGTGGGAATCTTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQPRRIS*WESSSM
Trigger: CATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGG...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGCCTTGGCTTTTGCCTaGCCTGGCAAGGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAALAFA*PGKERS
Trigger: AGAACGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTAGGCAGGCAATCGGGTaGGAGTTCTGGAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCRQAIG*EFWSFC
Trigger: GCAGAAGCTCCAGAACTCTCACCCGATTGCCTGCCT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGTGGCTGTGTCCTAATTaGAGAAAAAGAATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQWLCPN*RKRIQV
Trigger: CACCTGAATTCTTTTTCTTCAATTAGGACACAGCCA...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGAATAGAAATTCTCCTTaGTGGCTATTGCGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQNRNSP*WLLRGY
Trigger: ATAGCCACGCAATAGCCATCAAGGAGAATTTCTATT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGAATAAAACACAAATGTaGTCACAGAGCCTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQNKTQM*SQSLPD
Trigger: ATCAGGGAGGCTCTGTGATCACATTTGTGTTTTATT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTTCTGCCACCAGGCATTaGCTGTTGGCTGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLASATRH*LLADLD
Trigger: GTCAAGGTCAGCCAACAGGCAATGCCTGGTGGCAGA...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACCATGTTGTCTCCTCTaGCTGAAGCTGAGAAAAACC +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRPCCLL*LKLRKT
Trigger: GGTTTTTCTCAGCTTCAGGCAGAGGAGACAACATGG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTCTAGCTGGATCTCTTaGCATCCCTGCCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLSSWIS*HPCHSS
Trigger: AGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGTGCCCTTTCTAAATTaGAAGCCGGGTGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAVPFLN*KPGAVA
Trigger: AGCCACCGCACCCGGCTTGCAATTTAGAAAGGGCAC...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTCTCATGGCTGTTCAGTaGGCAAAGACGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLALMAVQ*AKTQQR
Trigger: CCTCTGCTGCGTCTTTGCCCACTGAACAGCCATGAG...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCTCCTCATTGCCATCTTaGATGAAGTACTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLASSLPS*MKYCPG
Trigger: CCCGGGGCAGTACTTCATCCAAGATGGCAATGAGGA...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGTCCTCATTGCCATCTTaGATGAAGTACTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRSSLPS*MKYCPG
Trigger: CCCGGGGCAGTACTTCATCCAAGATGGCAATGAGGA...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGAGAAGAATTAGCTGGTaGGAATCTTCTTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQRRISW*ESSSML
Trigger: CAACATGGAAGAAGATTCCCACCAGCTAATTCTTCT...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGGGCTTTTGCCTGGCCTaGCAAGGAACGTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRGFCLA*QGTFCL
Trigger: AAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAGCC...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGGCTTTTGCCTGGCCTaGCAAGGAACGTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAGFCLA*QGTFCL
Trigger: AAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAGCC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CAA 72 bp GTCACCATCTTACCGGTTCTAGCCAAGCTCAAACCTTaGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCC +
Preference number: 4 (lower is better)
Translates to: VTILPVLAKLKP*ESFSKLLLPYS
Trigger: GGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAAAGGTTTGAGCTTGGCTAGAACCGGTAAGATGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAACAGGTATTCACTCATaGTCTGCAATTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRTGIHS*SAISAT
Trigger: GGTGGCAGAAATTGCAGATCATGAGTGAATACCTGT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAATAGGCAAGGAAAGATaGTCGGCTGTCTTAGATGTC +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRIGKER*SAVLDV
Trigger: GACATCTAAGACAGCCGATCATCTTTCCTTGCCTAT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGTCCCTGCCATTCCTCTaGGCCCTTTTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRSLPFL*ALFIPV
Trigger: AACTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGA...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCGTGTCAATAAGACTTTaGAGGTGTCTGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVVSIRL*RCLGRR
Trigger: TCTCCTTCCCAGACACCTTCAAAGTCTTATTGACAC...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCATACAAATCAAATCCTaGTGCAGCACGGTATGGGGA +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVIQIKS*CSTVWG
Trigger: TCCCCATACCGTGCTGCATCAGGATTTGATTTGTAT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS-3UTR GCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAATGATCTGCAATTTCTaGCACCAGGCATTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRMICNF*HQALPV
Trigger: AACAGGCAATGCCTGGTGGCAGAAATTGCAGATCAT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACACCTCTCTGAACTTTaGAGGAAACCTTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRHLSEL*RKPSQD
Trigger: ATCCTGTGAAGGTTTCCTGCAAAGTTCAGAGAGGTG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCACCACGTCTGTAAAGTaGATTGCCACCAAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLATTSVK*IATKGD
Trigger: ATCCCCCTTGGTGGCAATGCACTTTACAGACGTGGT...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTAGGTGGGACTACAGATaGATGCCACCACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPRWDYR*MPPHPA
Trigger: AGCCGGGTGTGGTGGCATGCATCTGTAGTCCCACCT...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGCCATGTTGTCTCCTCTaGCTGAAGCTGAGAAAAACC +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLPCCLL*LKLRKT
Trigger: GGTTTTTCTCAGCTTCAGGCAGAGGAGACAACATGG...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCATCTCTTGCCATCCCTaGCATTCCTCTGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAISCHP*HSSEPF
Trigger: AAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGAT...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTCTCATGGCTGTTCAGTaGGCAAAGACGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCLMAVQ*AKTQQR
Trigger: CCTCTGCTGCGTCTTTGCCCACTGAACAGCCATGAG...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGGAGTTGCCTTCTCATaGCTGTTCAGTGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAGVAFS*LFSGQR
Trigger: TCTTTGCCCACTGAACAGCCATGAGAAGGCAACTCC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAAAAAGAAGCCGACTCTaGGTAGTAACTGATGGATCG +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRKRSRL*VVTDGS
Trigger: CGATCCATCAGTTACTACCCAGAGTCGGCTTCTTTT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTGCCTTGGCTTTTGCCTaGCCTGGCAAGGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCALAFA*PGKERS
Trigger: AGAACGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGC...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTCTGGCTAATGGGCCTTaGCTTTTGCCTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPLANGP*LLPGLA
Trigger: TGCCAGGCCAGGCAAAAGCCAAGGCCCATTAGCCAG...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTTGGATCCTCCTAGGTaGCATTTAAACTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVLDPPR*HLNLLR
Trigger: CCGAAGCAAGTTTAAATGCCACCTAGGAGGATCCAA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCCCAAGCTCAAACCTTTaGAGTCATTCTCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVPSSNL*SHSPNS
Trigger: GGAGTTTGGAGAATGACTCCAAAGGTTTGAGCTTGG...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACTTGTTAGTAGTGGTTaGCCTCCCTTTACTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRLVSSG*PPFTVS
Trigger: TGACACAGTAAAGGGAGGCCAACCACTACTAACAAG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGCATTGCCATCTTGGATaGAGTACTGCCCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQHCHLG*STAPGD
Trigger: GTCCCCCGGGGCAGTACTTCATCCAAGATGGCAATG...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCCATTGCCATCTTGGATaGAGTACTGCCCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPHCHLG*STAPGD
Trigger: GTCCCCCGGGGCAGTACTTCATCCAAGATGGCAATG...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTTTCATCACCTCTCTaGACTTTGCAGGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRFSSPL*TLQETF
Trigger: GAAGGTTTCCTGCAAAGTTCAGAGAGGTGATGAAAA...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGATAGGCAAGGAAAGATaGTCGGCTGTCTTAGATGTC +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLIGKER*SAVLDV
Trigger: GACATCTAAGACAGCCGATCATCTTTCCTTGCCTAT...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTGGTTGGGAGGAATCTaGCCTCTAAAACCAACAGAA +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLWLGGI*PLKPTE
Trigger: TTCTGTTGGTTTTAGAGGTCAGATTCCTCCCAACCA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGACTTGCTTCGGACCCTaGGACACTATACTATTCGCT +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRTCFGP*DTILFA
Trigger: AGCGAATAGTATAGTGTCTCAGGGTCCGAAGCAAGT...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTTCCCTGCCATTCCTCTaGGCCCTTTTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLASLPFL*ALFIPV
Trigger: AACTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGA...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTATTCACTCATGATCTaGAATTTCTGCCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVYSLMI*NFCHQA
Trigger: TGCCTGGTGGCAGAAATTGCAGATCATGAGTGAATA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTTCTTGGATGAAGTACTaGCCCGGGGGACAATCTACA +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLASWMKY*PGGQST
Trigger: TGTAGATTGTCCCCCGGGGCAGTACTTCATCCAAGA...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGTCTGTAAAGTGCATTaGCACCAAGGGGGATGTGTA +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAVCKVH*HQGGCV
Trigger: TACACATCCCCCTTGGTGGCAATGCACTTTACAGAC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTACCACGTCTGTAAAGTaGATTGCCACCAAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLATTSVK*IATKGD
Trigger: ATCCCCCTTGGTGGCAATGCACTTTACAGACGTGGT...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCAGGTGGGACTACAGATaGATGCCACCACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPRWDYR*MPPHPA
Trigger: AGCCGGGTGTGGTGGCATGCATCTGTAGTCCCACCT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTAGTGTTCTCCCCAGTTaGAGTGAGCCCCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCSVLPS*SEPHLF
Trigger: AAAGAGGTGGGGCTCACTGCAACTGGGGAGAACACT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAAAACATCCTTCTCTCTaGATCCCACAGGTATTCACT +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRKHPSL*IPQVFT
Trigger: AGTGAATACCTGTGGGATCCAGAGAGAAGGATGTTT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACCAAGAAGAATTAGCTaGTGGGAATCTTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRPRRIS*WESSSM
Trigger: CATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGAGGAGATTCAGACTTTaGATCCTCCTAGGTGGCATT +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLRRFRL*ILLGGI
Trigger: AATGCCACCTAGGAGGATCCAAAGTCTGAATCTCCT...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGAATACCTCTCTAGCTaGATCTCTTGCCATCCCTGC +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAEYLSS*ISCHPC
Trigger: GCAGGGATGGCAAGAGATCCAGCTAGAGAGGTATTC...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
3UTR CAA 72 bp CCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTaGTCTCCTCTGCCTGAAGCTGAGAAAAACCTGTTT +
Preference number: 4 (lower is better)
Translates to: PRRISWWESSSM*SPLPEAEKNLF
Trigger: AAACAGGTTTTTCTCAGCTTCAGGCAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTGGCTGTGTCCTAATTaGAGAAAAAGAATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVWLCPN*RKRIQV
Trigger: CACCTGAATTCTTTTTCTTCAATTAGGACACAGCCA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGCTGTGGCTTTGCATGTaGAATTTCCTCTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLLWLCM*NFLCYF
Trigger: AAAGTAGCAGAGGAAATTTCACATGCAAAGCCACAG...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTATAGTATGTTTACATaGCTGGCTTCAGTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVYSMFT*LASVPK
Trigger: CTTGGGAACTGAAGCCAGTCATGTAAACATACTATA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGGTTAAGAAAATGGGTTaGGAGGAGGCAGTTTCATTG +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLVKKMG*EEAVSL
Trigger: CAATGAAACTGCCTCCTCTCAACCCATTTTCTTAAC...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCAGAAGAAGAAGTAAATaGGTAAGATCAGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVRRRSK*VRSGLF
Trigger: GAACAGGCCTGATCTTACTCATTTACTTCTTCTTCT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361319.3
CDS-3UTR TCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTATAACTCTCCAACTCTaGCCTGTTCGGGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCITLQL*PVRARN
Trigger: GTTTCTGGCCCGAACAGGTCAGAGTTGGAGAGTTAT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539306.5
CDS-3UTR GCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTATTCACTCATGATCTaGAATTTCTGCCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLYSLMI*NFCHQA
Trigger: TGCCTGGTGGCAGAAATTGCAGATCATGAGTGAATA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCCACCTCTCTGAACTTTaGAGGAAACCTTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAHLSEL*RKPSQD
Trigger: ATCCTGTGAAGGTTTCCTGCAAAGTTCAGAGAGGTG...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGCACCTCTCTGAACTTTaGAGGAAACCTTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRHLSEL*RKPSQD
Trigger: ATCCTGTGAAGGTTTCCTGCAAAGTTCAGAGAGGTG...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGTCTGTAAAGTGCATTaGCACCAAGGGGGATGTGTA +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAVCKVH*HQGGCV
Trigger: TACACATCCCCCTTGGTGGCAATGCACTTTACAGAC...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATGCACTGCACAGGCACTaGTTGGTTCTTCACCACGTC +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNALHRH*LVLHHV
Trigger: GACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGC...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCCCCTTCAGTTGGCACTaGACAGGCACTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPPFSWH*TGTAWF
Trigger: GAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGG...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATATAACTTCTCCACTTaGTTGTCTTCACTACCAGAC +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRYNFST*LSSLPD
Trigger: GTCTGGTAGTGAAGACAAGCAAGTGGAGAAGTTATA...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCGTGCCCTTTCTAAATTaGAAGCCGGGTGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPVPFLN*KPGAVA
Trigger: AGCCACCGCACCCGGCTTGCAATTTAGAAAGGGCAC...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGAGGATGGAGCCCTTCTaGACCGGAGTTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQRMEPF*TGVAFS
Trigger: TGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCT...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTAAGGAGCGCTTAAATTaGCAGGCCTTCTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAKERLN*QAFLSS
Trigger: TGAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTT...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTAGAGTATCCAAAAGTTaGGTCCTCCAGACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLARVSKS*VLQTRA
Trigger: TGCTCTGGTCTGGAGGACCCAACTTTTGGATACTCT...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATCCTTTGCCCTTCAGTTaGCACTGCACAGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNPLPFS*HCTGTA
Trigger: AGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGG...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGAGAAGAAGAAGTAAATaGGTAAGATCAGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLRRRSK*VRSGSN
Trigger: GTTGGAGCCTGATCTTACTCATTTACTTCTTCTTCT...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218008.8
CDS-3UTR TCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGACTCTGGGTAGTAACTaGTGGATCGGATGTCATTTT +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRTLGSN*WIGCHF
Trigger: AAAATGACATCCGATCCATCAGTTACTACCCAGAGT...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCATCACAGAGCCTCCCTaGTTAAAATGCTTTAATTAC +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVITEPP*LKCFNY
Trigger: GTAATTAAAGCATTTTAATCAGGGAGGCTCTGTGAT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAATCACAGAGCCTCCCTaGTTAAAATGCTTTAATTAC +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRITEPP*LKCFNY
Trigger: GTAATTAAAGCATTTTAATCAGGGAGGCTCTGTGAT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTTATATTCCCAGTCTTaGTCAACAATGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVLYSQS*STMSPS
Trigger: AGATGGTGACATTGTTGATCAAGACTGGGAATATAA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTATAGTATGTTTACATaGCTGGCTTCAGTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLYSMFT*LASVPK
Trigger: CTTGGGAACTGAAGCCAGTCATGTAAACATACTATA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCTATTCACTCATGATCTaGAATTTCTGCCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAYSLMI*NFCHQA
Trigger: TGCCTGGTGGCAGAAATTGCAGATCATGAGTGAATA...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTTCTTGGATGAAGTACTaGCCCGGGGGACAATCTACA +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPSWMKY*PGGQST
Trigger: TGTAGATTGTCCCCCGGGGCAGTACTTCATCCAAGA...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTATAACTTCTCCACTTaGTTGTCTTCACTACCAGAC +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLYNFST*LSSLPD
Trigger: GTCTGGTAGTGAAGACAAGCAAGTGGAGAAGTTATA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCTCCAGTTACATAAACTaGTCACAGTTACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLASSYIN*SQLPRH
Trigger: GTGTCTGGGTAACTGTGAGCAGTTTATGTAACTGGA...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTATCTCTTGCCATCCCTaGCATTCCTCTGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPISCHP*HSSEPF
Trigger: AAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGAT...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATGAGTTCTGGAGCTTCTaGTGGTACAGGAGACACTGG +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNEFWSF*WYRRHW
Trigger: CCAGTGTCTCCTGTACCAGCAGAAGCTCCAGAACTC...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539306.5
CDS-3UTR CCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGACTGTAAGGAAAGGATaGAGCCCTTCTGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQTVRKG*SPSGPE
Trigger: CTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACAGT...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATACTGTAAGGAAAGGATaGAGCCCTTCTGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNTVRKG*SPSGPE
Trigger: CTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACAGT...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCTTGAAGTTAAGGCTATaGGCGAAGGGTCTGATCATA +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLALKLRL*AKGLII
Trigger: TATGATCAGACCCTTCGCCCATAGCCTTAACTTCAA...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGAGAAGAATTAGCTGGTaGGAATCTTCTTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLRRISW*ESSSML
Trigger: CAACATGGAAGAAGATTCCCACCAGCTAATTCTTCT...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGCCAAGAAGAATTAGCTaGTGGGAATCTTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRPRRIS*WESSSM
Trigger: CATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGG...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCGGCTTTTGCCTGGCCTaGCAAGGAACGTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPGFCLA*QGTFCL
Trigger: AAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAGCC...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAGTATGTTTACATGACTaGCTTCAGTTCCCAAGATTA +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRVCLHD*LQFPRL
Trigger: TAATCTTGGGAACTGAAGCCAGTCATGTAAACATAC...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTCTTGTTAGTAGTGGTTaGCCTCCCTTTACTGTGTCA +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLALVSSG*PPFTVS
Trigger: TGACACAGTAAAGGGAGGCCAACCACTACTAACAAG...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGGTGCATTGCAACAGATaGCATACAAATCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLVHCNR*HTNQIL
Trigger: CAGGATTTGATTTGTATGCCATCTGTTGCAATGCAC...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
3UTR CAA 72 bp GCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATaGACAGATTATGATTTCAATTTCCAGAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AWQGTFCLVMYS*TDYDFNFQSCS
Trigger: GCTACAGCTCTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTACAGGTATTCACTCATaGTCTGCAATTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCTGIHS*SAISAT
Trigger: GGTGGCAGAAATTGCAGATCATGAGTGAATACCTGT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGCTACCAGAGATACCATaGGATAAAACAGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLLPEIP*DKTETE
Trigger: TTCTGTTTCTGTTTTATCTCATGGTATCTCTGGTAG...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTTGGTTGGGAGGAATCTaGCCTCTAAAACCAACAGAA +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCWLGGI*PLKPTE
Trigger: TTCTGTTGGTTTTAGAGGTCAGATTCCTCCCAACCA...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGAATAAAACACAAATGTaGTCACAGAGCCTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRNKTQM*SQSLPD
Trigger: ATCAGGGAGGCTCTGTGATCACATTTGTGTTTTATT...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCCTCCACATCAATGTCTaGCCAATAGAAAATCATGTC +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLALHINV*PIENHV
Trigger: GACATGATTTTCTATTGGTCAGACATTGATGTGGAG...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGCTCCACATCAATGTCTaGCCAATAGAAAATCATGTC +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRLHINV*PIENHV
Trigger: GACATGATTTTCTATTGGTCAGACATTGATGTGGAG...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTGTGTCAATAAGACTTTaGAGGTGTCTGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCVSIRL*RCLGRR
Trigger: TCTCCTTCCCAGACACCTTCAAAGTCTTATTGACAC...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGTTAAGAAAATGGGTTaGGAGGAGGCAGTTTCATTG +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAVKKMG*EEAVSL
Trigger: CAATGAAACTGCCTCCTCTCAACCCATTTTCTTAAC...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTGTCTGTAAAGTGCATTaGCACCAAGGGGGATGTGTA +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPVCKVH*HQGGCV
Trigger: TACACATCCCCCTTGGTGGCAATGCACTTTACAGAC...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGAAAAAGAATTCAGGTaGTACCAGAGATACCATGAG +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAEKEFR*YQRYHE
Trigger: CTCATGGTATCTCTGGTAGCACCTGAATTCTTTTTC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTCCATGTTGTCTCCTCTaGCTGAAGCTGAGAAAAACC +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPPCCLL*LKLRKT
Trigger: GGTTTTTCTCAGCTTCAGGCAGAGGAGACAACATGG...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGTCTAGCTGGATCTCTTaGCATCCCTGCCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQSSWIS*HPCHSS
Trigger: AGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATGGAGTTGCCTTCTCATaGCTGTTCAGTGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNGVAFS*LFSGQR
Trigger: TCTTTGCCCACTGAACAGCCATGAGAAGGCAACTCC...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGGGAGTTGCCTTCTCATaGCTGTTCAGTGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQGVAFS*LFSGQR
Trigger: TCTTTGCCCACTGAACAGCCATGAGAAGGCAACTCC...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCCCGCTCCGTGAAGGTTaGTATATAGGGACTGATGGT +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPPLREG*YIGTDG
Trigger: ACCATCAGTCCCTATATACCAACCTTCACGGAGCGG...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000361319.3
CDS-3UTR CCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTAAGGAGCGCTTAAATTaGCAGGCCTTCTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPKERLN*QAFLSS
Trigger: TGAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTT...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTAAAAGAAGCCGACTCTaGGTAGTAACTGATGGATCG +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCKRSRL*VVTDGS
Trigger: CGATCCATCAGTTACTACCCAGAGTCGGCTTCTTTT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCGAATACCTCTCTAGCTaGATCTCTTGCCATCCCTGC +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPEYLSS*ISCHPC
Trigger: GCAGGGATGGCAAGAGATCCAGCTAGAGAGGTATTC...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACTCATTTTCACCTATTaGATAAAACTCAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRLIFTY*IKLKVL
Trigger: GAGGACTTTGAGTTTTATCCAATAGGTGAAAATGAG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTTTTTCATCACCTCTCTaGACTTTGCAGGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCFSSPL*TLQETF
Trigger: GAAGGTTTCCTGCAAAGTTCAGAGAGGTGATGAAAA...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGACTTGCTTCGGACCCTaGGACACTATACTATTCGCT +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQTCFGP*DTILFA
Trigger: AGCGAATAGTATAGTGTCTCAGGGTCCGAAGCAAGT...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCTTATATTCCCAGTCTTaGTCAACAATGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLALYSQS*STMSPS
Trigger: AGATGGTGACATTGTTGATCAAGACTGGGAATATAA...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGAAAAAGAATTCAGGTaGTACCAGAGATACCATGAG +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAEKEFR*YQRYHE
Trigger: CTCATGGTATCTCTGGTAGCACCTGAATTCTTTTTC...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGCTCCTTGATGGCTATTaGGTGGCTATTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRLLDGY*VAIVNF
Trigger: AAAATTTACAATAGCCACGCAATAGCCATCAAGGAG...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCAAGGAGCGCTTAAATTaGCAGGCCTTCTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPKERLN*QAFLSS
Trigger: TGAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCAGAGTATCCAAAAGTTaGGTCCTCCAGACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPRVSKS*VLQTRA
Trigger: TGCTCTGGTCTGGAGGACCCAACTTTTGGATACTCT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGAGAGTATCCAAAAGTTaGGTCCTCCAGACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQRVSKS*VLQTRA
Trigger: TGCTCTGGTCTGGAGGACCCAACTTTTGGATACTCT...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGCTCATTTTCACCTATTaGATAAAACTCAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: NSPRRISWWESSSMLSPLLIFTY*IKLKVL
Trigger: GAGGACTTTGAGTTTTATCCAATAGGTGAAAATGAG...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTCCAAGCTCAAACCTTTaGAGTCATTCTCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPPSSNL*SHSPNS
Trigger: GGAGTTTGGAGAATGACTCCAAAGGTTTGAGCTTGG...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGTATGTTTACATGACTaGCTTCAGTTCCCAAGATTA +
Preference number: 4 (lower is better)
Translates to: SLIFPVLINNVTILPVLAVCLHD*LQFPRL
Trigger: TAATCTTGGGAACTGAAGCCAGTCATGTAAACATAC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTCTTGTTAGTAGTGGTTaGCCTCCCTTTACTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPLVSSG*PPFTVS
Trigger: TGACACAGTAAAGGGAGGCCAACCACTACTAACAAG...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCACAGGTATTCACTCATaGTCTGCAATTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPTGIHS*SAISAT
Trigger: GGTGGCAGAAATTGCAGATCATGAGTGAATACCTGT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATATAGGCAAGGAAAGATaGTCGGCTGTCTTAGATGTC +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNIGKER*SAVLDV
Trigger: GACATCTAAGACAGCCGATCATCTTTCCTTGCCTAT...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTGGTTGGGAGGAATCTaGCCTCTAAAACCAACAGAA +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNWLGGI*PLKPTE
Trigger: TTCTGTTGGTTTTAGAGGTCAGATTCCTCCCAACCA...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTTTATATTCCCAGTCTTaGTCAACAATGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLALYSQS*STMSPS
Trigger: AGATGGTGACATTGTTGATCAAGACTGGGAATATAA...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCGTGTCAATAAGACTTTaGAGGTGTCTGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPVSIRL*RCLGRR
Trigger: TCTCCTTCCCAGACACCTTCAAAGTCTTATTGACAC...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTCTCCTTGATGGCTATTaGGTGGCTATTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLALLDGY*VAIVNF
Trigger: AAAATTTACAATAGCCACGCAATAGCCATCAAGGAG...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTTCCAGTTACATAAACTaGTCACAGTTACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPSSYIN*SQLPRH
Trigger: GTGTCTGGGTAACTGTGAGCAGTTTATGTAACTGGA...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTCCTTCACATAGTGGTTaGCAAGTGCCCTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPPSHSG*QVPFLN
Trigger: ATTTAGAAAGGGCACTTGGCAACCACTATGTGAAGG...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTTTGAAGTTAAGGCTATaGGCGAAGGGTCTGATCATA +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPLKLRL*AKGLII
Trigger: TATGATCAGACCCTTCGCCCATAGCCTTAACTTCAA...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTAGAAGAATTAGCTGGTaGGAATCTTCTTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCRRISW*ESSSML
Trigger: CAACATGGAAGAAGATTCCCACCAGCTAATTCTTCT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTTTCATCACCTCTCTaGACTTTGCAGGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNFSSPL*TLQETF
Trigger: GAAGGTTTCCTGCAAAGTTCAGAGAGGTGATGAAAA...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATACTCTGGGTAGTAACTaGTGGATCGGATGTCATTTT +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNTLGSN*WIGCHF
Trigger: AAAATGACATCCGATCCATCAGTTACTACCCAGAGT...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTCTACCAGAGATACCATaGGATAAAACAGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCLPEIP*DKTETE
Trigger: TTCTGTTTCTGTTTTATCTCATGGTATCTCTGGTAG...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCCTGTGGCTTTGCATGTaGAATTTCCTCTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPLWLCM*NFLCYF
Trigger: AAAGTAGCAGAGGAAATTTCACATGCAAAGCCACAG...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTTATAGTATGTTTACATaGCTGGCTTCAGTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPYSMFT*LASVPK
Trigger: CTTGGGAACTGAAGCCAGTCATGTAAACATACTATA...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGCAGGGGAGTAGAAGGTaGAAAATCATAACCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQQGSRR*KIITQS
Trigger: ACTTTGGGTTATGATTTTTCACCTTCTACTCCCCTG...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS-3UTR GCA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTTCCTGGATAAGAATCTaGCTCATGTCATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLASWIRI*LMSFLK
Trigger: CTTTAAAAATGACATGAGGCAGATTCTTATCCAGGA...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGTCCAGTTACATAAACTaGTCACAGTTACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQSSYIN*SQLPRH
Trigger: GTGTCTGGGTAACTGTGAGCAGTTTATGTAACTGGA...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCCCTTCACATAGTGGTTaGCAAGTGCCCTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPPSHSG*QVPFLN
Trigger: ATTTAGAAAGGGCACTTGGCAACCACTATGTGAAGG...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATCCTTCACATAGTGGTTaGCAAGTGCCCTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNPSHSG*QVPFLN
Trigger: ATTTAGAAAGGGCACTTGGCAACCACTATGTGAAGG...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGAAACATCCTTCTCTCTaGATCCCACAGGTATTCACT +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQKHPSL*IPQVFT
Trigger: AGTGAATACCTGTGGGATCCAGAGAGAAGGATGTTT...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCTTGAAGTTAAGGCTATaGGCGAAGGGTCTGATCATA +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPLKLRL*AKGLII
Trigger: TATGATCAGACCCTTCGCCCATAGCCTTAACTTCAA...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGAATAGAAATTCTCCTTaGTGGCTATTGCGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQNRNSP*WLLRGY
Trigger: ATAGCCACGCAATAGCCATCAAGGAGAATTTCTATT...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCAATAGAAATTCTCCTTaGTGGCTATTGCGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPNRNSP*WLLRGY
Trigger: ATAGCCACGCAATAGCCATCAAGGAGAATTTCTATT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR TCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGCTCCACATCAATGTCTaGCCAATAGAAAATCATGTC +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQLHINV*PIENHV
Trigger: GACATGATTTTCTATTGGTCAGACATTGATGTGGAG...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCGAAAAAGAATTCAGGTaGTACCAGAGATACCATGAG +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPEKEFR*YQRYHE
Trigger: CTCATGGTATCTCTGGTAGCACCTGAATTCTTTTTC...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATGTGCATTGCAACAGATaGCATACAAATCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNVHCNR*HTNQIL
Trigger: CAGGATTTGATTTGTATGCCATCTGTTGCAATGCAC...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS-3UTR TCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCATCACAGAGCCTCCCTaGTTAAAATGCTTTAATTAC +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPITEPP*LKCFNY
Trigger: GTAATTAAAGCATTTTAATCAGGGAGGCTCTGTGAT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR GCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGCTCCTTGATGGCTATTaGGTGGCTATTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQLLDGY*VAIVNF
Trigger: AAAATTTACAATAGCCACGCAATAGCCATCAAGGAG...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCATTGCTTTGCAATTGTaGACACAATGGATTCCATTG +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPIALQL*TQWIPL
Trigger: CAATGGAATCCATTGTGTCCACAATTGCAAAGCAAT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS-3UTR GCA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGTCCTGGATAAGAATCTaGCTCATGTCATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQSWIRI*LMSFLK
Trigger: CTTTAAAAATGACATGAGGCAGATTCTTATCCAGGA...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CCA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCCTCATTTTCACCTATTaGATAAAACTCAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: CEISSATFLAQDIFPHIPLIFTY*IKLKVL
Trigger: GAGGACTTTGAGTTTTATCCAATAGGTGAAAATGAG...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 90 bp TGTAAGGAAAGGATGGAGCCCTTCTGGACCGGAGTTGCCTTCTCATaGCTGTTCAGTGGGCAAAGACGCAGCAGAGGCAGGCAATCGGGT +
Preference number: 5 (lower is better)
Translates to: CKERMEPFWTGVAFS*LFSGQRRSRGRQSG
Trigger: ACCCGATTGCCTGCCTCTGCTGCGTCTTTGCCCACTGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGGCCTTTGCCCTTCAGTaGGCACTGCACAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQAFALQ*ALHRHC
Trigger: GCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGC...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 90 bp CATCGAGTCTGTAGCGATAACTGTAAGGAAAGGATGGAGCCCTTCTaGACCGGAGTTGCCTTCTCATGGCTGTTCAGTGGGCAAAGACGC +
Preference number: 5 (lower is better)
Translates to: HRVCSDNCKERMEPF*TGVAFSWLFSGQRR
Trigger: GCGTCTTTGCCCACTGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACAGTTATCGCTACAGACTCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGCTGCACAGGCACTGCTaGGTTCTTCACCACGTCTGT +
Preference number: 5 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQLHRHC*VLHHVC
Trigger: ACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAG...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTCCTCCTCCTCCGATTaGGGCACCACCGTCACCCGA +
Preference number: 5 (lower is better)
Translates to: NSPRRISWWESSSMLSPLSSSSD*GTTVTR
Trigger: TCGGGTGACGGTGGTGCCCAAATCGGAGGAGGAGGA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAGCCTTTGCCCTTCAGTaGGCACTGCACAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRAFALQ*ALHRHC
Trigger: GCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGC...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS TCA 90 bp GGGCCAGAAACATCCTTCTCTCTGGATCCCACAGGTATTCACTCATaGTCTGCAATTTCTGCCACCAGGCATTGCCTGTTGGCTGACCTT +
Preference number: 5 (lower is better)
Translates to: GPETSFSLDPTGIHS*SAISATRHCLLADL
Trigger: AAGGTCAGCCAACAGGCAATGCCTGGTGGCAGAAATTGCAGATCATGAGTGAATACCTGTGGGATCCAGAGAGAAGGATGTTTCTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS GCA 90 bp CTGCACAGGCACTGCTTGGTTCTTCACCACGTCTGTAAAGTGCATTaGCACCAAGGGGGATGTGTAGTTAACGTGAGTCAGTTTGCCGTA +
Preference number: 5 (lower is better)
Translates to: LHRHCLVLHHVCKVH*HQGGCVVNVSQFAV
Trigger: TACGGCAAACTGACTCACGTTAACTACACATCCCCCTTGGTGGCAATGCACTTTACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS GCA 90 bp ATCATTTATGACGCCTTTGCCCTTCAGTTGGCACTGCACAGGCACTaGTTGGTTCTTCACCACGTCTGTAAAGTGCATTGCCACCAAGGG +
Preference number: 5 (lower is better)
Translates to: IIYDAFALQLALHRH*LVLHHVCKVHCHQG
Trigger: CCCTTGGTGGCAATGCACTTTACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 90 bp TTCATCCGGATCATCGAGTCTGTAGCGATAACTGTAAGGAAAGGATaGAGCCCTTCTGGACCGGAGTTGCCTTCTCATGGCTGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: FIRIIESVAITVRKG*SPSGPELPSHGCSV
Trigger: CACTGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACAGTTATCGCTACAGACTCGATGATCCGGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 90 bp GTATTCACTCATGATCTGCAATTTCTGCCACCAGGCATTGCCTGTTaGCTGACCTTGACCCTCTTCCTCCTCCTTTTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VFTHDLQFLPPGIAC*LTLTLFLLLFLLFL
Trigger: GAGGAAGAGGAGGAAAAGGAGGAGGAAGAGGGTCAAGGTCAGCCAACAGGCAATGCCTGGTGGCAGAAATTGCAGATCATGAGTGAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 90 bp CAGGCTCCAACTCTGACCTGTTCGGGCCAGAAACATCCTTCTCTCTaGATCCCACAGGTATTCACTCATGATCTGCAATTTCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: QAPTLTCSGQKHPSL*IPQVFTHDLQFLPP
Trigger: TGGTGGCAGAAATTGCAGATCATGAGTGAATACCTGTGGGATCCAGAGAGAAGGATGTTTCTGGCCCGAACAGGTCAGAGTTGGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218008.8
CDS CCA 90 bp TGCCAAGTGTCGGGTTCAGAAACGTTGAAGTTGAAGTTAAGGCTATaGGCGAAGGGTCTGATCATAACTCCAGGAGGCTTTACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: CQVSGSETLKLKLRL*AKGLIITPGGFTRS
Trigger: GGAGCGGGTAAAGCCTCCTGGAGTTATGATCAGACCCTTCGCCCATAGCCTTAACTTCAACTTCAACGTTTCTGAACCCGACACTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000361319.3
CDS CCA 90 bp GGGTCCTCCAGACCAGAGCAGTTCTTTAGGAAGGAGCGCTTAAATTaGCAGGCCTTCTTGTCCTCATCCTCATTGCCATCTTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: GSSRPEQFFRKERLN*QAFLSSSSLPSWMK
Trigger: CTTCATCCAAGATGGCAATGAGGATGAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTTCCTAAAGAACTGCTCTGGTCTGGAGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCTCCTCCTCCTCCGATTaGGGCACCACCGTCACCCGA +
Preference number: 5 (lower is better)
Translates to: SLIFPVLINNVTILPVLASSSSD*GTTVTR
Trigger: TCGGGTGACGGTGGTGCCCAAATCGGAGGAGGAGGA...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 90 bp CGCTTAAATTGGCAGGCCTTCTTGTCCTCATCCTCATTGCCATCTTaGATGAAGTACTGCCCCGGGGGACAATCTACATTCATTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RLNWQAFLSSSSLPS*MKYCPGGQSTFISS
Trigger: AGAGGAAATGAATGTAGATTGTCCCCCGGGGCAGTACTTCATCCAAGATGGCAATGAGGATGAGGACAAGAAGGCCTGCCAATTTAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 90 bp AACTCTCCAACTCTGACCTGTTCGGGCCAGAAACATCCTTCTCTCTaGATCCCACAGGTATTCACTCATGATCTGCAATTTCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: NSPTLTCSGQKHPSL*IPQVFTHDLQFLPP
Trigger: TGGTGGCAGAAATTGCAGATCATGAGTGAATACCTGTGGGATCCAGAGAGAAGGATGTTTCTGGCCCGAACAGGTCAGAGTTGGAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGCCTGTTGGCTGACCTaGACCCTCTTCCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SLIFPVLINNVTILPVLAACWLT*TLFLLL
Trigger: AAGGAGGAGGAAGAGGGTCAAGGTCAGCCAACAGGC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGTCAGAAACGTTGAAGTaGAAGTTAAGGCTATGGGCG +
Preference number: 5 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQSETLK*KLRLWA
Trigger: CGCCCATAGCCTTAACTTCAACTTCAACGTTTCTGA...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGAGGCTGGAGAATCACTaGAATCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: NSPRRISWWESSSMLSPLRLENH*NPGGGG
Trigger: ACCTCCACCTCCCGGATTCAAGTGATTCTCCAGCCT...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS TCA 90 bp AAGGGTAGTAGCGGAGGTCAAAAGAAGCCGACTCTGGGTAGTAACTaGTGGATCGGATGTCATTTTCATCACCTCTCTGAACTTTGCAGG +
Preference number: 5 (lower is better)
Translates to: KGSSGGQKKPTLGSN*WIGCHFHHLSELCR
Trigger: CCTGCAAAGTTCAGAGAGGTGATGAAAATGACATCCGATCCATCAGTTACTACCCAGAGTCGGCTTCTTTTGACCTCCGCTACTACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 90 bp TTTGCCGTAGTAAGGGTAGTAGCGGAGGTCAAAAGAAGCCGACTCTaGGTAGTAACTGATGGATCGGATGTCATTTTCATCACCTCTCTG +
Preference number: 5 (lower is better)
Translates to: FAVVRVVAEVKRSRL*VVTDGSDVIFITSL
Trigger: CAGAGAGGTGATGAAAATGACATCCGATCCATCAGTTACTACCCAGAGTCGGCTTCTTTTGACCTCCGCTACTACCCTTACTACGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGCCTGTTGGCTGACCTaGACCCTCTTCCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAACWLT*TLFLLL
Trigger: AAGGAGGAGGAAGAGGGTCAAGGTCAGCCAACAGGC...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCAATTGGCAGGCCTTCTaGTCCTCATCCTCATTGCCA +
Preference number: 5 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVNWQAF*SSSSLP
Trigger: TGGCAATGAGGATGAGGACAAGAAGGCCTGCCAATT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGCTGCACAGGCACTGCTaGGTTCTTCACCACGTCTGT +
Preference number: 5 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRLHRHC*VLHHVC
Trigger: ACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAG...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTGCCTTTGCCCTTCAGTaGGCACTGCACAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCAFALQ*ALHRHC
Trigger: GCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGC...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATCATTTATGACGCCTTaGCCCTTCAGTTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRSFMTP*PFSWHC
Trigger: GCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGA...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCAGGTGGCATTTAAACTaGCTTCGGACCCTGAGACAC +
Preference number: 5 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVRWHLN*LRTLRH
Trigger: GTGTCTCAGGGTCCGAAGCAAGTTTAAATGCCACCT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGAGGCTGGAGAATCACTaGAATCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRRLENH*NPGGGG
Trigger: ACCTCCACCTCCCGGATTCAAGTGATTCTCCAGCCT...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS GCA 90 bp TCATTGATGACATCATTTATGACGCCTTTGCCCTTCAGTTGGCACTaGACAGGCACTGCTTGGTTCTTCACCACGTCTGTAAAGTGCATT +
Preference number: 5 (lower is better)
Translates to: SLMTSFMTPLPFSWH*TGTAWFFTTSVKCI
Trigger: AATGCACTTTACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGATGTCATCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 90 bp AAACGATCATTGATGACATCATTTATGACGCCTTTGCCCTTCAGTTaGCACTGCACAGGCACTGCTTGGTTCTTCACCACGTCTGTAAAG +
Preference number: 5 (lower is better)
Translates to: KRSLMTSFMTPLPFS*HCTGTAWFFTTSVK
Trigger: CTTTACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGATGTCATCAATGATCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTCCTTCTGGACCGGAGTaGCCTTCTCATGGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAPSGPE*PSHGCS
Trigger: TGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGG...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTACCAGGCATTGCCTGTaGGCTGACCTTGACCCTCTT +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLATRHCL*ADLDPL
Trigger: AAGAGGGTCAAGGTCAGCCAACAGGCAATGCCTGGT...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGGAAGGAGCGCTTAAATaGGCAGGCCTTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFREGALK*AGLLVL
Trigger: GAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTTC...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTCATTTATGACGCCTTaGCCCTTCAGTTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: NSPRRISWWESSSMLSPLSFMTP*PFSWHC
Trigger: GCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGAGGTGGCATTTAAACTaGCTTCGGACCCTGAGACAC +
Preference number: 5 (lower is better)
Translates to: NSPRRISWWESSSMLSPLRWHLN*LRTLRH
Trigger: GTGTCTCAGGGTCCGAAGCAAGTTTAAATGCCACCT...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAGCCAAGCTCAAACCTTaGGAGTCATTCTCCAAACTC +
Preference number: 5 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRAKLKP*ESFSKL
Trigger: GAGTTTGGAGAATGACTCCAAAGGTTTGAGCTTGGC...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTAGCTGGATCTCTTGCCATCCCTGCCATTCCTCTGAGCCCTTTTCATTCCAGTCCCTTAACCCAATGTaGCTTTTGTTCTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: SSWISCHPCHSSEPFSFQSLNPM*LLFSSF
Trigger: GAAAGATGAGAACAAAAGCAACATTGGGTTAAGGGA...CTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGAGATCCAGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTCCTTCTGGACCGGAGTaGCCTTCTCATGGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCPSGPE*PSHGCS
Trigger: TGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGG...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTATCCTCATTGCCATCTaGGATGAAGTACTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAILIAI*DEVLPR
Trigger: CCGGGGCAGTACTTCATCCAAGATGGCAATGAGGAT...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGGAGGAGATTCAGACTTaGGATCCTCCTAGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFREEIQT*DPPRWH
Trigger: ATGCCACCTAGGAGGATCCAAAGTCTGAATCTCCTC...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCGAGGAGATTCAGACTTaGGATCCTCCTAGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: SLIFPVLINNVTILPVLAEEIQT*DPPRWH
Trigger: ATGCCACCTAGGAGGATCCAAAGTCTGAATCTCCTC...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTGTGTCAATAAGACTTaGAAGGTGTCTGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVCVNKT*KVSGKE
Trigger: CTCCTTCCCAGACACCTTCAAAGTCTTATTGACACA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGGCCTGTTGGCTGACCTaGACCCTCTTCCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQACWLT*TLFLLL
Trigger: AAGGAGGAGGAAGAGGGTCAAGGTCAGCCAACAGGC...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTACCAGGCATTGCCTGTaGGCTGACCTTGACCCTCTT +
Preference number: 5 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPTRHCL*ADLDPL
Trigger: AAGAGGGTCAAGGTCAGCCAACAGGCAATGCCTGGT...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCTCGGGTTCAGAAACGTaGAAGTTGAAGTTAAGGCTA +
Preference number: 5 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVSGSET*KLKLRL
Trigger: TAGCCTTAACTTCAACTTCAACGTTTCTGAACCCGA...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTAATTGGCAGGCCTTCTaGTCCTCATCCTCATTGCCA +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLANWQAF*SSSSLP
Trigger: TGGCAATGAGGATGAGGACAAGAAGGCCTGCCAATT...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTGAAGGAGCGCTTAAATaGGCAGGCCTTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCEGALK*AGLLVL
Trigger: GAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTTC...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTTCTTGGTTGTCTAGGTaGGACCGAGTGGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCSWLSR*DRVVIP
Trigger: GGGAATCACCACTCGGTCCAACCTAGACAACCAAGA...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTGTGTCAATAAGACTTaGAAGGTGTCTGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: NSPRRISWWESSSMLSPLCVNKT*KVSGKE
Trigger: CTCCTTCCCAGACACCTTCAAAGTCTTATTGACACA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATTTCCAGCCTTCTGGACCGGAGTaGCCTTCTCATGGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: GTFCLVMYSLTDYDFNFQPSGPE*PSHGCS
Trigger: TGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGG...CTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCACCAGGCATTGCCTGTaGGCTGACCTTGACCCTCTT +
Preference number: 5 (lower is better)
Translates to: CEISSATFLAQDIFPHIPTRHCL*ADLDPL
Trigger: AAGAGGGTCAAGGTCAGCCAACAGGCAATGCCTGGT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGTCAGAAACGTTGAAGTaGAAGTTAAGGCTATGGGCG +
Preference number: 5 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRSETLK*KLRLWA
Trigger: CGCCCATAGCCTTAACTTCAACTTCAACGTTTCTGA...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTATCCTCATTGCCATCTaGGATGAAGTACTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPILIAI*DEVLPR
Trigger: CCGGGGCAGTACTTCATCCAAGATGGCAATGAGGAT...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTGAAGGAGCGCTTAAATaGGCAGGCCTTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPEGALK*AGLLVL
Trigger: GAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTTC...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATCTGCACAGGCACTGCTaGGTTCTTCACCACGTCTGT +
Preference number: 5 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNLHRHC*VLHHVC
Trigger: ACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAG...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCCCCACAAAACGATCATaGATGACATCATTTATGACG +
Preference number: 5 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVPTKRS*MTSFMT
Trigger: CGTCATAAATGATGTCATCAATGATCGTTTTGTGGG...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGACCCACAAAACGATCATaGATGACATCATTTATGACG +
Preference number: 5 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRPTKRS*MTSFMT
Trigger: CGTCATAAATGATGTCATCAATGATCGTTTTGTGGG...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTGTTTGCAGGAATGTTaGCCTTTAGACGATTACACC +
Preference number: 5 (lower is better)
Translates to: NSPRRISWWESSSMLSPLCLQEC*PLDDYT
Trigger: GGTGTAATCGTCTAAAGGCAAACATTCCTGCAAACA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCCTGAGAAAAACCTGTTaGCAGGAATGTTTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVLRKTC*QECLPL
Trigger: TAAAGGCAAACATTCCTGCAAACAGGTTTTTCTCAG...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGAATCTTCTTCCATGTaGTCTCCTCTGCCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAESSSM*SPLPEA
Trigger: AGCTTCAGGCAGAGGAGACAACATGGAAGAAGATTC...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGCCAAGCTCAAACCTTaGGAGTCATTCTCCAAACTC +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAAKLKP*ESFSKL
Trigger: GAGTTTGGAGAATGACTCCAAAGGTTTGAGCTTGGC...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGTGTGTCAATAAGACTTaGAAGGTGTCTGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRCVNKT*KVSGKE
Trigger: CTCCTTCCCAGACACCTTCAAAGTCTTATTGACACA...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCGTAAAACCAAGTGCATaGCAACAGATGGCATACAAA +
Preference number: 5 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVVKPSA*QQMAYK
Trigger: TTTGTATGCCATCTGTTGCAATGCACTTGGTTTTAC...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS-3UTR CAA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATATCCTCATTGCCATCTaGGATGAAGTACTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNILIAI*DEVLPR
Trigger: CCGGGGCAGTACTTCATCCAAGATGGCAATGAGGAT...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TTGGAGTCATTCTCCAAACTCCTCCTTCCTTATTCCCCATTCCACAGTCTTGTCATTAATATACTCTGTTaGTCATCAGGAGACACTACC +
Preference number: 5 (lower is better)
Translates to: LESFSKLLLPYSPFHSLVINILC*SSGDTT
Trigger: GGTAGTGTCTCCTGATGACAAACAGAGTATATTAAT...GACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp CTTTTGCCTGGCCTGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGAATTAATATACTCTGTTaGTCATCAGGAGACACTACC +
Preference number: 5 (lower is better)
Translates to: LLPGLARNVLSCHVFIDRINILC*SSGDTT
Trigger: GGTAGTGTCTCCTGATGACAAACAGAGTATATTAAT...TCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCAGGCCAGGCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGTGTTTGCAGGAATGTTaGCCTTTAGACGATTACACC +
Preference number: 5 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRCLQEC*PLDDYT
Trigger: GGTGTAATCGTCTAAAGGCAAACATTCCTGCAAACA...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp GGCTGTCTTAGATGTCCATCTGGCTGTGTCCTAATTGAAGAAAAAGAATTCAGGAGTCAGTTCCCTGTTTaGGGAGAAAGGAAACATTGT +
Preference number: 5 (lower is better)
Translates to: GCLRCPSGCVLIEEKEFRSQFPV*GERKHC
Trigger: ACAATGTTTCCTTTCTCCCAAAACAGGGAACTGACT...CCTGAATTCTTTTTCTTCAATTAGGACACAGCCAGATGGACATCTAAGACAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AATAGCCCAAGAAGAATTAGCTGGTGGGAATCTTCTTCCATGTTGTCTCCTCTGTCCCTTAACCCAATGTaGCTTTTGTTCTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: NSPRRISWWESSSMLSPLSLNPM*LLFSSF
Trigger: GAAAGATGAGAACAAAAGCAACATTGGGTTAAGGGA...CAGAGGAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTTCGGGTTCAGAAACGTaGAAGTTGAAGTTAAGGCTA +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLASGSET*KLKLRL
Trigger: TAGCCTTAACTTCAACTTCAACGTTTCTGAACCCGA...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCAATTGGCAGGCCTTCTaGTCCTCATCCTCATTGCCA +
Preference number: 5 (lower is better)
Translates to: CEISSATFLAQDIFPHIPNWQAF*SSSSLP
Trigger: TGGCAATGAGGATGAGGACAAGAAGGCCTGCCAATT...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCTCATTTATGACGCCTTaGCCCTTCAGTTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: CEISSATFLAQDIFPHIPSFMTP*PFSWHC
Trigger: GCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGA...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTTGTTTGCAGGAATGTTaGCCTTTAGACGATTACACC +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLACLQEC*PLDDYT
Trigger: GGTGTAATCGTCTAAAGGCAAACATTCCTGCAAACA...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCGAGGAGATTCAGACTTaGGATCCTCCTAGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: CEISSATFLAQDIFPHIPEEIQT*DPPRWH
Trigger: ATGCCACCTAGGAGGATCCAAAGTCTGAATCTCCTC...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTTCAGAAACGTTGAAGTaGAAGTTAAGGCTATGGGCG +
Preference number: 5 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPSETLK*KLRLWA
Trigger: CGCCCATAGCCTTAACTTCAACTTCAACGTTTCTGA...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTCTTATATTCCCAGTCTTGATCAACAATGTCACCATCTTACCGGTTCTAGCCATTAATATACTCTGTTaGTCATCAGGAGACACTACC +
Preference number: 5 (lower is better)
Translates to: SLIFPVLINNVTILPVLAINILC*SSGDTT
Trigger: GGTAGTGTCTCCTGATGACAAACAGAGTATATTAAT...GGCTAGAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTGGTGTTAAGAAGCAGTaGAGTGATCAGGTGACCAAA +
Preference number: 5 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPGVKKQ*SDQVTK
Trigger: TTTGGTCACCTGATCACTCAACTGCTTCTTAACACC...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTAGTCAGTTCCCTGTTTaGGGAGAAAGGAAACATTGT +
Preference number: 5 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCSQFPV*GERKHC
Trigger: ACAATGTTTCCTTTCTCCCAAAACAGGGAACTGACT...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp ACCTATTGGATAAAACTCAAAGTCCTCTTTCCATCCCTGAATACCTCTCTAGCTGTAAAACCAAGTGCATaGCAACAGATGGCATACAAA +
Preference number: 5 (lower is better)
Translates to: TYWIKLKVLFPSLNTSLAVKPSA*QQMAYK
Trigger: TTTGTATGCCATCTGTTGCAATGCACTTGGTTTTAC...AGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS-3UTR CAA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATGGTGTTAAGAAGCAGTaGAGTGATCAGGTGACCAAA +
Preference number: 5 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNGVKKQ*SDQVTK
Trigger: TTTGGTCACCTGATCACTCAACTGCTTCTTAACACC...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTAGTCAGTTCCCTGTTTaGGGAGAAAGGAAACATTGT +
Preference number: 5 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPSQFPV*GERKHC
Trigger: ACAATGTTTCCTTTCTCCCAAAACAGGGAACTGACT...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TCTTTAAAAAGTCACAAGGACGGTCTTCATCTCTATCCCAGAACAATATCCTGTCTTATATTCCCAGTCTaGATCAACAATGTCACCATC +
Preference number: 5 (lower is better)
Translates to: SLKSHKDGLHLYPRTISCLIFPV*INNVTI
Trigger: GATGGTGACATTGTTGATCAAGACTGGGAATATAAG...ACAGGATATTGTTCTGGGATAGAGATGAAGACCGTCCTTGTGACTTTTTAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTCTGAGAAAAACCTGTTaGCAGGAATGTTTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPLRKTC*QECLPL
Trigger: TAAAGGCAAACATTCCTGCAAACAGGTTTTTCTCAG...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp AAGAATCTGCCTCATGTCATTTTTAAAGTAAATGCTAAACTGGCTAATGGGCCTCTTATATTCCCAGTCTaGATCAACAATGTCACCATC +
Preference number: 5 (lower is better)
Translates to: KNLPHVIFKVNAKLANGPLIFPV*INNVTI
Trigger: GATGGTGACATTGTTGATCAAGACTGGGAATATAAG...AGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAGATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TGTGAAATTTCCTCTGCTACTTTCTTAGCTCAAGATATTTTTCCTCATATTCCCCCCACAAAACGATCATaGATGACATCATTTATGACG +
Preference number: 5 (lower is better)
Translates to: CEISSATFLAQDIFPHIPPTKRS*MTSFMT
Trigger: CGTCATAAATGATGTCATCAATGATCGTTTTGTGGG...GGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS-3UTR CAA 90 bp TGGCAAGGAACGTTCTGTCTTGTCATGTATTCATTGACAGATTATGATTTCAATCTGAGAAAAACCTGTTaGCAGGAATGTTTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: WQGTFCLVMYSLTDYDFNLRKTC*QECLPL
Trigger: TAAAGGCAAACATTCCTGCAAACAGGTTTTTCTCAG...ATTGAAATCATAATCTGTCAATGAATACATGACAAGACAGAACGTTCCTTGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 72 bp AGGATGGAGCCCTTCTGGACCGGAGTTGCCTTCTCATaGCTGTTCAGTGGGCAAAGACGCAGCAGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RMEPFWTGVAFS*LFSGQRRSRGR
Trigger: CCTGCCTCTGCTGCGTCTTTGCCCACTGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 90 bp TCTTCCTCCTCTTCTTTCTCCTCCTCTTCTTCCTCCTCCTCCGATTaGGGCACCACCGTCACCCGAGCCTCTTCTTCTGCTTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SSSSSFSSSSSSSSD*GTTVTRASSSASSS
Trigger: AGAGGAGGAAGCAGAAGAAGAGGCTCGGGTGACGGTGGTGCCCAAATCGGAGGAGGAGGAAGAAGAGGAGGAGAAAGAAGAGGAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 90 bp GTAGCGATAACTGTAAGGAAAGGATGGAGCCCTTCTGGACCGGAGTaGCCTTCTCATGGCTGTTCAGTGGGCAAAGACGCAGCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: VAITVRKGWSPSGPE*PSHGCSVGKDAAEA
Trigger: TGCCTCTGCTGCGTCTTTGCCCACTGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACAGTTATCGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS GCA 72 bp GACGCCTTTGCCCTTCAGTTGGCACTGCACAGGCACTaGTTGGTTCTTCACCACGTCTGTAAAGTGCATTGC +
Preference number: 6 (lower is better)
Translates to: DAFALQLALHRH*LVLHHVCKVHC
Trigger: GCAATGCACTTTACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 72 bp ACTGTAAGGAAAGGATGGAGCCCTTCTGGACCGGAGTaGCCTTCTCATGGCTGTTCAGTGGGCAAAGACGCA +
Preference number: 6 (lower is better)
Translates to: TVRKGWSPSGPE*PSHGCSVGKDA
Trigger: TGCGTCTTTGCCCACTGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 72 bp GCCTTTGCCCTTCAGTTGGCACTGCACAGGCACTGCTaGGTTCTTCACCACGTCTGTAAAGTGCATTGCCAC +
Preference number: 6 (lower is better)
Translates to: AFALQLALHRHC*VLHHVCKVHCH
Trigger: GTGGCAATGCACTTTACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 72 bp TGTAGCGATAACTGTAAGGAAAGGATGGAGCCCTTCTaGACCGGAGTTGCCTTCTCATGGCTGTTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: CSDNCKERMEPF*TGVAFSWLFSG
Trigger: CCCACTGAACAGCCATGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACAGTTATCGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 90 bp CCAGAGCAGTTCTTTAGGAAGGAGCGCTTAAATTGGCAGGCCTTCTaGTCCTCATCCTCATTGCCATCTTGGATGAAGTACTGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: PEQFFRKERLNWQAF*SSSSLPSWMKYCPG
Trigger: CCCGGGGCAGTACTTCATCCAAGATGGCAATGAGGATGAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTTCCTAAAGAACTGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 90 bp ATTTATGACGCCTTTGCCCTTCAGTTGGCACTGCACAGGCACTGCTaGGTTCTTCACCACGTCTGTAAAGTGCATTGCCACCAAGGGGGA +
Preference number: 6 (lower is better)
Translates to: IYDAFALQLALHRHC*VLHHVCKVHCHQGG
Trigger: TCCCCCTTGGTGGCAATGCACTTTACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTCATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 90 bp CATGATCTGCAATTTCTGCCACCAGGCATTGCCTGTTGGCTGACCTaGACCCTCTTCCTCCTCCTTTTCCTCCTCTTCCTCCTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: HDLQFLPPGIACWLT*TLFLLLFLLFLLFF
Trigger: AAAGAAGAGGAGGAAGAGGAGGAAAAGGAGGAGGAAGAGGGTCAAGGTCAGCCAACAGGCAATGCCTGGTGGCAGAAATTGCAGATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 90 bp AGGAAGGAGCGCTTAAATTGGCAGGCCTTCTTGTCCTCATCCTCATaGCCATCTTGGATGAAGTACTGCCCCGGGGGACAATCTACATTC +
Preference number: 6 (lower is better)
Translates to: RKERLNWQAFLSSSS*PSWMKYCPGGQSTF
Trigger: GAATGTAGATTGTCCCCCGGGGCAGTACTTCATCCAAGATGGCAATGAGGATGAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 72 bp ATCATCGAGTCTGTAGCGATAACTGTAAGGAAAGGATaGAGCCCTTCTGGACCGGAGTTGCCTTCTCATGGC +
Preference number: 6 (lower is better)
Translates to: IIESVAITVRKG*SPSGPELPSHG
Trigger: GCCATGAGAAGGCAACTCCGGTCCAGAAGGGCTCCATCCTTTCCTTACAGTTATCGCTACAGACTCGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 90 bp ACCCTGCCCACAAAACGATCATTGATGACATCATTTATGACGCCTTaGCCCTTCAGTTGGCACTGCACAGGCACTGCTTGGTTCTTCACC +
Preference number: 6 (lower is better)
Translates to: TLPTKRSLMTSFMTP*PFSWHCTGTAWFFT
Trigger: GGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGATGTCATCAATGATCGTTTTGTGGGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS GCA 72 bp CACTGCTTGGTTCTTCACCACGTCTGTAAAGTGCATTaGCACCAAGGGGGATGTGTAGTTAACGTGAGTCAG +
Preference number: 6 (lower is better)
Translates to: HCLVLHHVCKVH*HQGGCVVNVSQ
Trigger: CTGACTCACGTTAACTACACATCCCCCTTGGTGGCAATGCACTTTACAGACGTGGTGAAGAACCAAGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS GCA 72 bp ACATCATTTATGACGCCTTTGCCCTTCAGTTGGCACTaGACAGGCACTGCTTGGTTCTTCACCACGTCTGTA +
Preference number: 6 (lower is better)
Translates to: TSFMTPLPFSWH*TGTAWFFTTSV
Trigger: TACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS TCA 72 bp ACATCCTTCTCTCTGGATCCCACAGGTATTCACTCATaGTCTGCAATTTCTGCCACCAGGCATTGCCTGTTG +
Preference number: 6 (lower is better)
Translates to: TSFSLDPTGIHS*SAISATRHCLL
Trigger: CAACAGGCAATGCCTGGTGGCAGAAATTGCAGATCATGAGTGAATACCTGTGGGATCCAGAGAGAAGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS TCA 72 bp AGGCCTTCTTGTCCTCATCCTCATTGCCATCTTGGATaGAGTACTGCCCCGGGGGACAATCTACATTCATTT +
Preference number: 6 (lower is better)
Translates to: RPSCPHPHCHLG*STAPGDNLHSF
Trigger: AAATGAATGTAGATTGTCCCCCGGGGCAGTACTTCATCCAAGATGGCAATGAGGATGAGGACAAGAAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 72 bp AGACCAGAGCAGTTCTTTAGGAAGGAGCGCTTAAATTaGCAGGCCTTCTTGTCCTCATCCTCATTGCCATCT +
Preference number: 6 (lower is better)
Translates to: RPEQFFRKERLN*QAFLSSSSLPS
Trigger: AGATGGCAATGAGGATGAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTTCCTAAAGAACTGCTCTGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 72 bp GATCAGGCCTGTTCGGGCCAGAAACATCCTTCTCTCTaGATCCCACAGGTATTCACTCATGATCTGCAATTT +
Preference number: 6 (lower is better)
Translates to: DQACSGQKHPSL*IPQVFTHDLQF
Trigger: AAATTGCAGATCATGAGTGAATACCTGTGGGATCCAGAGAGAAGGATGTTTCTGGCCCGAACAGGCCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361319.3
CDS CAA 72 bp ATTGATGACATCATTTATGACGCCTTTGCCCTTCAGTaGGCACTGCACAGGCACTGCTTGGTTCTTCACCAC +
Preference number: 6 (lower is better)
Translates to: IDDIIYDAFALQ*ALHRHCLVLHH
Trigger: GTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGATGTCATCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS TCA 72 bp AGCGGAGGTCAAAAGAAGCCGACTCTGGGTAGTAACTaGTGGATCGGATGTCATTTTCATCACCTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: SGGQKKPTLGSN*WIGCHFHHLSE
Trigger: TTCAGAGAGGTGATGAAAATGACATCCGATCCATCAGTTACTACCCAGAGTCGGCTTCTTTTGACCTCCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CCA 72 bp ACTCTGACCTGTTCGGGCCAGAAACATCCTTCTCTCTaGATCCCACAGGTATTCACTCATGATCTGCAATTT +
Preference number: 6 (lower is better)
Translates to: TLTCSGQKHPSL*IPQVFTHDLQF
Trigger: AAATTGCAGATCATGAGTGAATACCTGTGGGATCCAGAGAGAAGGATGTTTCTGGCCCGAACAGGTCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000539306.5
CDS CCA 72 bp TCGGGTTCAGAAACGTTGAAGTTGAAGTTAAGGCTATaGGCGAAGGGTCTGATCATAACTCCAGGAGGCTTT +
Preference number: 6 (lower is better)
Translates to: SGSETLKLKLRL*AKGLIITPGGF
Trigger: AAAGCCTCCTGGAGTTATGATCAGACCCTTCGCCCATAGCCTTAACTTCAACTTCAACGTTTCTGAACCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218008.8
ENST00000361319.3
CDS CCA 72 bp GTAAGGGTAGTAGCGGAGGTCAAAAGAAGCCGACTCTaGGTAGTAACTGATGGATCGGATGTCATTTTCATC +
Preference number: 6 (lower is better)
Translates to: VRVVAEVKRSRL*VVTDGSDVIFI
Trigger: GATGAAAATGACATCCGATCCATCAGTTACTACCCAGAGTCGGCTTCTTTTGACCTCCGCTACTACCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 72 bp ACAAAACGATCATTGATGACATCATTTATGACGCCTTaGCCCTTCAGTTGGCACTGCACAGGCACTGCTTGG +
Preference number: 6 (lower is better)
Translates to: TKRSLMTSFMTP*PFSWHCTGTAW
Trigger: CCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGATGTCATCAATGATCGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 90 bp AAAACGATCATTGATGACATCATTTATGACGCCTTTGCCCTTCAGTaGGCACTGCACAGGCACTGCTTGGTTCTTCACCACGTCTGTAAA +
Preference number: 6 (lower is better)
Translates to: KTIIDDIIYDAFALQ*ALHRHCLVLHHVCK
Trigger: TTTACAGACGTGGTGAAGAACCAAGCAGTGCCTGTGCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGATGTCATCAATGATCGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5
CDS CAA 90 bp GTTTCTATGTTCAGGGTAAAGATTACCCTGCCCACAAAACGATCATaGATGACATCATTTATGACGCCTTTGCCCTTCAGTTGGCACTGC +
Preference number: 6 (lower is better)
Translates to: VSMFRVKITLPTKRS*MTSFMTPLPFSWHC
Trigger: GCAGTGCCAACTGAAGGGCAAAGGCGTCATAAATGATGTCATCAATGATCGTTTTGTGGGCAGGGTAATCTTTACCCTGAACATAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218008.8
ENST00000361319.3
ENST00000539306.5