Pregenerated sensors for ATP1B3 (Homo sapiens)
Ensembl gene IDs: ENSG00000069849Ensembl transcript IDs: ENST00000286371.8, ENST00000465172.5, ENST00000475483.5, ENST00000482635.1, ENST00000484727.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCATGGTGTGCGCGCGGACGGCGAGAGGAGCTGCGGCCGCGGGGATaGAGGCGGCGAGGGCTGCGGAGGCGCGTCCCGGCTCCGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: SWCARGRREELRPRG*RRRGLRRRVPAPAA Trigger: CGCCGCCGGAGCCGGGACGCGCCTCCGCAGCCCTCGCCGCCTCCATCCCCGCGGCCGCAGCTCCTCTCGCCGTCCGCGCGCACACCATGA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000286371.8 ENST00000465172.5 |
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| CDS GCA 90 bp | CCTGGGCGCCGGGGCGCTGAGAAGATGCTACCCGCGGCGGGCGGGTaGGGAGAGCACGAAAACGACTCCAGTCGGCCCGCGGCTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PGRRGAEKMLPAAGG*GEHENDSSRPAASS Trigger: AGAGGAAGCCGCGGGCCGACTGGAGTCGTTTTCGTGCTCTCCGCACCCGCCCGCCGCGGGTAGCATCTTCTCAGCGCCCCGGCGCCCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475483.5 |
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| CDS TCA 90 bp | AGGAGGAGGACTGGGTTTCCTGGGCGTTCCTGGGCGCCGGGGCGCTaGGAAGATGCTACCCGCGGCGGGCGGGTGCGGAGAGCACGAAAA | + |
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Preference number: 5 (lower is better) Translates to: RRRTGFPGRSWAPGR*EDATRGGRVRRARK Trigger: TTTTCGTGCTCTCCGCACCCGCCCGCCGCGGGTAGCATCTTCTCAGCGCCCCGGCGCCCAGGAACGCCCAGGAAACCCAGTCCTCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475483.5 |
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| CDS GCA 90 bp | GACTGGGTTTCCTGGGCGTTCCTGGGCGCCGGGGCGCTGAGAAGATaGTACCCGCGGCGGGCGGGTGCGGAGAGCACGAAAACGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: DWVSWAFLGAGALRR*YPRRAGAESTKTTP Trigger: TGGAGTCGTTTTCGTGCTCTCCGCACCCGCCCGCCGCGGGTAGCATCTTCTCAGCGCCCCGGCGCCCAGGAACGCCCAGGAAACCCAGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475483.5 |
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| CDS GCA 90 bp | ACGTTTATAATAATAGCAAAAGGCGGGCGTCCCCGCGCCGCAGGTTaGTTAGGAGGAGGACTGGGTTTCCTGGGCGTTCCTGGGCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: TFIIIAKGGRPRAAG*LGGGLGFLGVPGRR Trigger: CCGGCGCCCAGGAACGCCCAGGAAACCCAGTCCTCCTCCTAAGCAACCTGCGGCGCGGGGACGCCCGCCTTTTGCTATTATTATAAACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475483.5 |
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| CDS TCA 90 bp | CAGCAGGAATGCACCAGCAGGTTTAGGACCGATGTTTTCCTGAAATaGATAAAATGCTGTGCTTCCAGACTGGAAAGCAACAGCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: QQECTSRFRTDVFLK*IKCCASRLESNSHH Trigger: GTGGTGGCTGTTGCTTTCCAGTCTGGAAGCACAGCATTTTATTCATTTCAGGAAAACATCGGTCCTAAACCTGCTGGTGCATTCCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484727.1 |
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| CDS TCA 72 bp | ACTGGGTTTCCTGGGCGTTCCTGGGCGCCGGGGCGCTaGGAAGATGCTACCCGCGGCGGGCGGGTGCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TGFPGRSWAPGR*EDATRGGRVRR Trigger: TCTCCGCACCCGCCCGCCGCGGGTAGCATCTTCTCAGCGCCCCGGCGCCCAGGAACGCCCAGGAAACCCAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475483.5 |
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| CDS GCA 72 bp | TCCTGGGCGTTCCTGGGCGCCGGGGCGCTGAGAAGATaGTACCCGCGGCGGGCGGGTGCGGAGAGCACGAAA | + |
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Preference number: 6 (lower is better) Translates to: SWAFLGAGALRR*YPRRAGAESTK Trigger: TTTCGTGCTCTCCGCACCCGCCCGCCGCGGGTAGCATCTTCTCAGCGCCCCGGCGCCCAGGAACGCCCAGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475483.5 |
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| CDS GCA 72 bp | ATAATAGCAAAAGGCGGGCGTCCCCGCGCCGCAGGTTaGTTAGGAGGAGGACTGGGTTTCCTGGGCGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: IIAKGGRPRAAG*LGGGLGFLGVP Trigger: AGGAACGCCCAGGAAACCCAGTCCTCCTCCTAAGCAACCTGCGGCGCGGGGACGCCCGCCTTTTGCTATTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475483.5 |
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| CDS CAA 72 bp | AATAATAGCAAAAGGCGGGCGTCCCCGCGCCGCAGGTaGCTTAGGAGGAGGACTGGGTTTCCTGGGCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: NNSKRRASPRRR*LRRRTGFPGRS Trigger: GGAACGCCCAGGAAACCCAGTCCTCCTCCTAAGCAACCTGCGGCGCGGGGACGCCCGCCTTTTGCTATTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475483.5 |
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| CDS CAA 90 bp | AACGTTTATAATAATAGCAAAAGGCGGGCGTCCCCGCGCCGCAGGTaGCTTAGGAGGAGGACTGGGTTTCCTGGGCGTTCCTGGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: NVYNNSKRRASPRRR*LRRRTGFPGRSWAP Trigger: CGGCGCCCAGGAACGCCCAGGAAACCCAGTCCTCCTCCTAAGCAACCTGCGGCGCGGGGACGCCCGCCTTTTGCTATTATTATAAACGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475483.5 |
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| CDS CCA 72 bp | ATTAAACAGGGCTGGCGTCTACCTACCCCAGACAAGTaGTACGTCAACACATGCTCCAGCTTCCCAAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: IKQGWRLPTPDK*YVNTCSSFPKE Trigger: CTCTTTTGGGAAGCTGGAGCATGTGTTGACGTACCACTTGTCTGGGGTAGGTAGACGCCAGCCCTGTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482635.1 |
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