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Pregenerated sensors for ATP1B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143153

Ensembl transcript IDs: ENST00000367816.5, ENST00000494797.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GAGGGACGGCGCAGGCTGCGCGGCTCCGAGCCCCGCACCTATTGGTaGGCGCGCAGCCGCTCGCGGGCTTTCTTTGGTCCGCCGAGCGCT +
Preference number: 5 (lower is better)
Translates to: EGRRRLRGSEPRTYW*ARSRSRAFFGPPSA
Trigger: AGCGCTCGGCGGACCAAAGAAAGCCCGCGAGCGGCTGCGCGCCCACCAATAGGTGCGGGGCTCGGAGCCGCGCAGCCTGCGCCGTCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367816.5
CDS CCA 90 bp AGGGAGGGACGGCGCAGGCTGCGCGGCTCCGAGCCCCGCACCTATTaGTGGGCGCGCAGCCGCTCGCGGGCTTTCTTTGGTCCGCCGAGC +
Preference number: 5 (lower is better)
Translates to: REGRRRLRGSEPRTY*WARSRSRAFFGPPS
Trigger: GCTCGGCGGACCAAAGAAAGCCCGCGAGCGGCTGCGCGCCCACCAATAGGTGCGGGGCTCGGAGCCGCGCAGCCTGCGCCGTCCCTCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367816.5
CDS GCA 90 bp CATTTCAAAATGTCAGCTAAGCACTATTTCCCTGACTCATTCTCCTaGCGATTCCCACAGATCCTCCCAAGCAGGAACACCAATCGGCCT +
Preference number: 5 (lower is better)
Translates to: HFKMSAKHYFPDSFS*RFPQILPSRNTNRP
Trigger: AGGCCGATTGGTGTTCCTGCTTGGGAGGATCTGTGGGAATCGGCAGGAGAATGAGTCAGGGAAATAGTGCTTAGCTGACATTTTGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494797.1
CDS GCA 72 bp AGGCAGGACGCGCCGCTGCCGCTGCGGCTCTCGGAGTaGGAGACGCGCGGCGGAGGAGCCAAGGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: RQDAPLPLRLSE*ETRGGGAKAGA
Trigger: TGCTCCTGCCTTGGCTCCTCCGCCGCGCGTCTCGCACTCCGAGAGCCGCAGCGGCAGCGGCGCGTCCTGCCT
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367816.5
CDS CAA 90 bp GAGGGAGGGACGGCGCAGGCTGCGCGGCTCCGAGCCCCGCACCTATaGGTGGGCGCGCAGCCGCTCGCGGGCTTTCTTTGGTCCGCCGAG +
Preference number: 6 (lower is better)
Translates to: EGGTAQAARLRAPHL*VGAQPLAGFLWSAE
Trigger: CTCGGCGGACCAAAGAAAGCCCGCGAGCGGCTGCGCGCCCACCAATAGGTGCGGGGCTCGGAGCCGCGCAGCCTGCGCCGTCCCTCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367816.5
CDS CCA 72 bp CGCAGGCTGCGCGGCTCCGAGCCCCGCACCTATTGGTaGGCGCGCAGCCGCTCGCGGGCTTTCTTTGGTCCG +
Preference number: 6 (lower is better)
Translates to: RRLRGSEPRTYW*ARSRSRAFFGP
Trigger: CGGACCAAAGAAAGCCCGCGAGCGGCTGCGCGCCCACCAATAGGTGCGGGGCTCGGAGCCGCGCAGCCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367816.5
CDS CCA 72 bp CGGCGCAGGCTGCGCGGCTCCGAGCCCCGCACCTATTaGTGGGCGCGCAGCCGCTCGCGGGCTTTCTTTGGT +
Preference number: 6 (lower is better)
Translates to: RRRLRGSEPRTY*WARSRSRAFFG
Trigger: ACCAAAGAAAGCCCGCGAGCGGCTGCGCGCCCACCAATAGGTGCGGGGCTCGGAGCCGCGCAGCCTGCGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367816.5
CDS CAA 72 bp ACGGCGCAGGCTGCGCGGCTCCGAGCCCCGCACCTATaGGTGGGCGCGCAGCCGCTCGCGGGCTTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: TAQAARLRAPHL*VGAQPLAGFLW
Trigger: CCAAAGAAAGCCCGCGAGCGGCTGCGCGCCCACCAATAGGTGCGGGGCTCGGAGCCGCGCAGCCTGCGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367816.5
CDS GCA 72 bp ATGTCAGCTAAGCACTATTTCCCTGACTCATTCTCCTaGCGATTCCCACAGATCCTCCCAAGCAGGAACACC +
Preference number: 6 (lower is better)
Translates to: MSAKHYFPDSFS*RFPQILPSRNT
Trigger: GGTGTTCCTGCTTGGGAGGATCTGTGGGAATCGGCAGGAGAATGAGTCAGGGAAATAGTGCTTAGCTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494797.1