RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP1A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000132681

Ensembl transcript IDs: ENST00000368081.9, ENST00000418334.5, ENST00000469023.5, ENST00000470705.1, ENST00000477338.5

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCTaGGCTTCCCTTCAGCCCACCTCATCCTCTGCCCATGATTCCCTC +
Preference number: 1 (lower is better)
Translates to: SRTMPLPAGLQLDAG*ASLQPTSSSAHDSL
Trigger: GAGGGAATCATGGGCAGAGGATGAGGTGGGCTGAAGGGAAGCCCAGCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR GCA 90 bp CCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTaGCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCTCAGAT +
Preference number: 1 (lower is better)
Translates to: PTSSSAHDSLKPAQD*PSFSSKIIHPSVSD
Trigger: ATCTGAGACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR-3UTR GCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGATTCAGCAGGACCATaGCCCTCCCTGCGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDDSAGP*PSLRGS
Trigger: GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATC...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR-3UTR TCA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCCACCCCTGTGTCACATaGAGCTCTTCATCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSHPCVT*SSSSAE
Trigger: CTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTG...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR-3UTR TCA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCATCCTCTGCCCATaGTTCCCTCAAGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGLILCP*FPQASP
Trigger: TGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAG...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR-3UTR TCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATTGGTTCTGGAGGATCTaGTCAAGCTGCTTGGACTGT +
Preference number: 2 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDWFWRI*SSCLDC
Trigger: ACAGTCCAAGCAGCTTGATCAGATCCTCCAGAACCA...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR-3UTR GCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCTCACTGCAACCTCTaGCTCTGGGTTCAAGTGATT +
Preference number: 2 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDAHCNL*LWVQVI
Trigger: AATCACTTGAACCCAGAGGCAGAGGTTGCAGTGAGC...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
3UTR-3UTR TCA 90 bp CAGCCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCACACCCCTGTGTCACATaGAGCTCTTCATCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: QPTSSSAHDSLKPAQDCPHPCVT*SSSSAE
Trigger: CTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTG...TGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR-3UTR GCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATTTGTTTCTCATGCCCTaGTGGAAAAGTGAGTTGCGG +
Preference number: 2 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDLFLMP*WKSELR
Trigger: CCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAA...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR-3UTR TCA 90 bp ACTGGCATCGACCTTGCTGATAGGGATCTTAAGCCGGGCAGCGACTTCCTCTGCCACCCCTGTGTCACATaGAGCTCTTCATCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: TGIDLADRDLKPGSDFLCHPCVT*SSSSAE
Trigger: CTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTG...GCAGAGGAAGTCGCTGCCCGGCTTAAGATCCCTATCAGCAAGGTCGATGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR-3UTR CCA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTAGGCAGGAGAATCGCTaGAACCCTGGAAGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSRQENR*NPGSRG
Trigger: ACCTCTGCTTCCAGGGTTCCAGCGATTCTCCTGCCT...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
3UTR-3UTR CCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTATCTGATCAAGCTGCTTaGACTGTATGTCCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLSDQAA*TVCPSV
Trigger: AACTGAAGGACATACAGTCCAAGCAGCTTGATCAGA...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR-3UTR CCA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCCTCCCGAAGGTGGATaGACATCTAGGGAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSPPEGG*TSRESK
Trigger: TTTGCTCTCCCTAGATGTCCATCCACCTTCGGGAGG...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
3UTR-3UTR TCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCGCCTCTGGGTTCAAGTaGTTCTCCTGCTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSASGFK*FSCFSL
Trigger: GAGGCTGAAGCAGGAGAATCACTTGAACCCAGAGGC...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
3UTR-3UTR GCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCAAGCCAGCCCAGGATTaGCCATCTTTCTCATCCAAG +
Preference number: 2 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPKPAQD*PSFSSK
Trigger: CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR-3UTR TCA 90 bp ATTTCATCTGTATTAAATGGGAATCCCTTGGAGAAGCTGCTAGGCAGATTCAAGCACCCCTGTGTCACATaGAGCTCTTCATCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: ISSVLNGNPLEKLLGRFKHPCVT*SSSSAE
Trigger: CTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTG...CTTGAATCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAATACAGATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR CAA 90 bp TTGTCCATGGGGAAATTTATTTCATCTGTATTAAATGGGAATCCCTaGGAGAAGCTGCTAGGCAGATTCAAGAAGCAGAAGCCTAGCACA +
Preference number: 2 (lower is better)
Translates to: LSMGKFISSVLNGNP*EKLLGRFKKQKPST
Trigger: TGTGCTAGGCTTCTGCTTCTTGAATCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAATACAGATGAAATAAATTTCCCCATGGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR-3UTR CAA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATACATCTCGCCCCAGGTaGAACCCAGCCCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDTSRPR*NPAPPP
Trigger: AGGAGGAGGGGCTGGGTTCAACCTGGGGCGAGATGT...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000469023.5
3UTR-3UTR CAA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTATGCACCACAATGGCTTaGGCAGCACTGGCATCGACC +
Preference number: 3 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLCTTMA*AALAST
Trigger: GGTCGATGCCAGTGCTGCCAAAGCCATTGTGGTGCA...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR-3UTR CAA 90 bp ACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCCAAGCCAGCCCAGGATaGCCCATCTTTCTCATCCAA +
Preference number: 3 (lower is better)
Translates to: TGFSRTMPLPAGLQLDAGQASPG*PIFLIQ
Trigger: TTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTG...GCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR-3UTR CAA 90 bp TCCGGAGCACCCTTCATCATCAGTACGTGGGTCTGGGAGCTGTCCTCCCGAAGGGCCAAGATTGCGCTATaGCACTCTAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: SGAPFIISTWVWELSSRRAKIAL*HSSLGD
Trigger: GTCACCCAGGCTAGAGTGCAATAGCGCAATCTTGGC...CCTTCGGGAGGACAGCTCCCAGACCCACGTACTGATGATGAAGGGTGCTCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
3UTR-3UTR CAA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTACCAGATTATCCGTCTTaGGGTTCCTTGGAAGCCTCT +
Preference number: 3 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLPDYPS*GSLEAS
Trigger: AGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGG...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR CCA 72 bp AAGATCCTCTCCGGAGCACCCTTCATCATCAGTACGTaGGTCTGGGAGCTGTCCTCCCGAAGGTGGATGGAC +
Preference number: 3 (lower is better)
Translates to: KILSGAPFIIST*VWELSSRRWMD
Trigger: GTCCATCCACCTTCGGGAGGACAGCTCCCAGACCCACGTACTGATGATGAAGGGTGCTCCGGAGAGGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
3UTR-3UTR CAA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTGCACTGGCATCGACCTaGCTGATAGGGATCTTAAGC +
Preference number: 3 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSALAST*LIGILS
Trigger: GCTTAAGATCCCTATCAGCAAGGTCGATGCCAGTGC...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR GCA 72 bp AGCTGCTTGGACTGTATGTCCTTCAGTTCTGCACCATaGACCACAATGGCTTTGGCAGCACTGGCATCGACC +
Preference number: 3 (lower is better)
Translates to: SCLDCMSFSSAP*TTMALAALAST
Trigger: GGTCGATGCCAGTGCTGCCAAAGCCATTGTGGTGCATGGTGCAGAACTGAAGGACATACAGTCCAAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
3UTR-3UTR CAA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCCAAGCCAGCCCAGGATaGCCCATCTTTCTCATCCAA +
Preference number: 3 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPQASPG*PIFLIQ
Trigger: TTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTG...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR-3UTR CAA 90 bp AGAGCCTGGATCATCCCAGATTATCCGTCTTTGGGTTCCTTGGAAGCCTCTTCACAAGCCAGCCCAGGATaGCCCATCTTTCTCATCCAA +
Preference number: 3 (lower is better)
Translates to: RAWIIPDYPSLGSLEASSQASPG*PIFLIQ
Trigger: TTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTG...TGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGGATGATCCAGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
3UTR GCA 72 bp TCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTaGCCATCTTTCTCATCCAAGATAATTCATCCTAGT +
Preference number: 3 (lower is better)
Translates to: SSAHDSLKPAQD*PSFSSKIIHPS
Trigger: ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
3UTR-3UTR CAA 90 bp ATTTCATCTGTATTAAATGGGAATCCCTTGGAGAAGCTGCTAGGCAGATTCAAGGGTGATCTACCAACCTaGGCCTCGGAAACTGCTGGG +
Preference number: 3 (lower is better)
Translates to: ISSVLNGNPLEKLLGRFKGDLPT*ASETAG
Trigger: CCCAGCAGTTTCCGAGGCCAAGGTTGGTAGATCACC...CTTGAATCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAATACAGATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
3UTR TCA 72 bp AAAGACCTGTGTTCTGGGGCTAGCAAGAATGCATTATaGCCTCAGGTCAGTCCATTTAACTTTGCAAAATCT +
Preference number: 3 (lower is better)
Translates to: KDLCSGASKNAL*PQVSPFNFAKS
Trigger: AGATTTTGCAAAGTTAAATGGACTGACCTGAGGTCATAATGCATTCTTGCTAGCCCCAGAACACAGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR GCA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGACCATGCCCCTCCCTaGGGGGCTCCAGCTAGATGC +
Preference number: 4 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDADHAPP*GAPARC
Trigger: GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTC...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCGCCAACCGCCAGGCCTaGCGTCAGGGAGGCAATTCT +
Preference number: 4 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSANRQA*RQGGNS
Trigger: AGAATTGCCTCCCTGACGTCAGGCCTGGCGGTTGGC...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCCCAGTGGAGGCGGATaGCCAGCAGATCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRPSGGG*PADQQA
Trigger: GGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGG...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATTCAGGGGAGCGGCTCTaGGGTTCTGACTCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDSGERL*GSDSPV
Trigger: GACTGGGGAGTCAGAACCCCAGAGCCGCTCCCCTGA...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCGGCCTCGGAAACTGCTaGGATTACAGGCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCGLGNC*DYRHRH
Trigger: GTGGCGGTGCCTGTAATCCCAGCAGTTTCCGAGGCC...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR GCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCCTTGGCCTCGGAAACTaGTGGGATTACAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCLGLGN*WDYRHR
Trigger: GCGGTGCCTGTAATCCCAGCAGTTTCCGAGGCCAAG...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCATCAGTACGTGGGTCTaGGAGCTGTCCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCISTWV*ELSSRR
Trigger: CCTTCGGGAGGACAGCTCCCAGACCCACGTACTGAT...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp CAGCCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCAAGGCCAGGGGAGGGCTaGGGGCTGGGACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QPTSSSAHDSLKPAQDCPRPGEG*GLGLAS
Trigger: AGAAGCAAGTCCCAGCCCCCAGCCCTCCCCTGGCCT...TGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470705.1
CDS-3UTR CCA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCGCATGGGAGTCCTTGTaGCTGTGGTGGGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSAWESL*LWWGRE
Trigger: TTCCCTCCCCCACCACAGCCACAAGGACTCCCATGC...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCGCAGGAAACAAGAGGTaGAGCGTAACCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCAGNKR*SVTRCL
Trigger: GAGGCACCTGGTTACGCTTCACCTCTTGTTTCCTGC...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR TCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCGAACTTGAGGAGGGCTaGCTCGGAAGCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCELEEG*LGSITC
Trigger: ACAGGTGATGCTTCCGAGTCAGCCCTCCTCAAGTTC...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATACGGCTCCCAGCCTCTaGCATCCCTCGACAATGATG +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDTAPSL*HPSTMM
Trigger: CATCATTGTCGAGGGATGTCAGAGGCTGGGAGCCGT...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp ACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCATGGGGTTCCTCTTGTaGTGGACAGGAAATGCCCGC +
Preference number: 4 (lower is better)
Translates to: TGFSRTMPLPAGLQLDAGMGFLL*WTGNAR
Trigger: GCGGGCATTTCCTGTCCATCACAAGAGGAACCCCAT...GCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGAGCAAAGGGAGCACTaGTGGGACAGGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLEQREH*WDRRRD
Trigger: GTCTCTCCTCCTGTCCCATCAGTGCTCCCTTTGCTC...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAATCAGTACGTGGGTCTaGGAGCTGTCCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDAISTWV*ELSSRR
Trigger: CCTTCGGGAGGACAGCTCCCAGACCCACGTACTGAT...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCCTAGCCTGGCCAGCATaGCAAAACCCCGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSLAWPA*QNPVSY
Trigger: GTAGGAGACGGGGTTTTGCCATGCTGGCCAGGCTAG...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCAGCCTGAAGCTCCCTaGGGGCAGAACCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGQPEAP*GQNQAL
Trigger: GAGTGCCTGGTTCTGCCCCCAGGGAGCTTCAGGCTG...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGGAACTTGAGGAGGGCTaGCTCGGAAGCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRELEEG*LGSITC
Trigger: ACAGGTGATGCTTCCGAGTCAGCCCTCCTCAAGTTC...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGCCTCTGGGTTCAAGTaGTTCTCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLASGFK*FSCFSL
Trigger: GAGGCTGAAGCAGGAGAATCACTTGAACCCAGAGGC...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR GCA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAATCCCCAGAAAGAGCTaGCCGAGCTCAACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDAIPRKS*PSSTVG
Trigger: TCCCACAGTTGAGCTCGGGCAGCTCTTTCTGGGGAT...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCATGAGATCCGCCCACTaGACAACCACGATGGTGACA +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCMRSAH*TTTMVT
Trigger: TGTCACCATCGTGGTTGTGCAGTGGGCGGATCTCAT...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp ACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCCTGTCCTCCCGAAGGTaGATGGACATCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: TGFSRTMPLPAGLQLDAGLSSRR*MDIWYL
Trigger: CAAGTACCAGATGTCCATCCACCTTCGGGAGGACAG...GCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368081.9
CDS-3UTR CCA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGGCACCACAATGGCTTTaGCAGCACTGGCATCGACCT +
Preference number: 4 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRAPQWL*QHWHRP
Trigger: AGGTCGATGCCAGTGCTGCCAAAGCCATTGTGGTGC...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCGCACCACAATGGCTTTaGCAGCACTGGCATCGACCT +
Preference number: 4 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSAPQWL*QHWHRP
Trigger: AGGTCGATGCCAGTGCTGCCAAAGCCATTGTGGTGC...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp ACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCCATAAGCCAAGGAGATaGCAGGGACCATGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: TGFSRTMPLPAGLQLDAGHKPRR*QGPCQC
Trigger: GCACTGACATGGTCCCTGCCATCTCCTTGGCTTATG...GCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCCACGTCCATGCCTaGAGTGTAGGACAGAAATGC +
Preference number: 4 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDAGHVHA*SVGQKC
Trigger: GCATTTCTGTCCTACACTCCAGGCATGGACGTGGCC...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCAGCCATCCGGGTGCTaGCGGATGAGGAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGQPSGC*RMRSFL
Trigger: CAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTG...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTACACCCCTGTGTCACATaGAGCTCTTCATCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLHPCVT*SSSSAE
Trigger: CTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTG...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCACACCCCTGTGTCACATaGAGCTCTTCATCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDAHPCVT*SSSSAE
Trigger: CTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTG...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGCATCTCGCCCCAGGTTaGACCCAGCCCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRHLAPG*TQPLLL
Trigger: AAGGAGGAGGGGCTGGGTTCAACCTGGGGCGAGATG...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR GCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCCGACGGACAGTACGATaGTCAGGTAGAGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCRRTVR*SGRGCL
Trigger: AAGACAACCTCTACCTGAGCATCGTACTGTCCGTCG...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGCCCAGTGGAGGCGGATaGCCAGCAGATCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRPSGGG*PADQQA
Trigger: GGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGG...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATATGAGATCCGCCCACTaGACAACCACGATGGTGACA +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDMRSAH*TTTMVT
Trigger: TGTCACCATCGTGGTTGTGCAGTGGGCGGATCTCAT...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp ACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCAAGCCAGCCCAGGATTaGCCATCTTTCTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: TGFSRTMPLPAGLQLDAGKPAQD*PSFSSK
Trigger: CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT...GCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTGACCATGCCCCTCCCTaGGGGGCTCCAGCTAGATGC +
Preference number: 4 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSDHAPP*GAPARC
Trigger: GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTC...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGTTTCCCCTGCATCCTTaGCAACTGGATGGCGAGAGA +
Preference number: 4 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRFPLHP*QLDGER
Trigger: TCTCTCGCCATCCAGTTGGCAAGGATGCAGGGGAAA...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGCAGCGATAGGTGTCTaGCCAACCGCCAGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRAAIGV*PTARPD
Trigger: GTCAGGCCTGGCGGTTGGCCAGACACCTATCGCTGC...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCACAGTCTGTTCTTCAGTaGTGTCGGCCTCATACACGG +
Preference number: 4 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDAQSVLQ*CRPHTR
Trigger: CCGTGTATGAGGCCGACACCACTGAAGAACAGACTG...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCTTCATCATCAGTACGTaGGTCTGGGAGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSFIIST*VWELSS
Trigger: GGAGGACAGCTCCCAGACCCACGTACTGATGATGAA...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCACCATGCACCACAATaGCTTTGGCAGCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRHHAPQ*LWQHWH
Trigger: ATGCCAGTGCTGCCAAAGCCATTGTGGTGCATGGTG...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCATAAGCCAAGGAGATaGCAGGGACCATGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRHKPRR*QGPCQC
Trigger: GCACTGACATGGTCCCTGCCATCTCCTTGGCTTATG...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp ACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCTATTTATCTTCCCAGTaGAGGCGGATGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TGFSRTMPLPAGLQLDAGYLSSQ*RRMPSR
Trigger: TCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATA...GCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCACCAGGTTATCTTGAGTaGGTACATTCGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDAPGYLE*VHSQGH
Trigger: GTGGCCCTGCGAATGTACCCACTCAAGATAACCTGG...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATCCAGGTTATCTTGAGTaGGTACATTCGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDPGYLE*VHSQGH
Trigger: GTGGCCCTGCGAATGTACCCACTCAAGATAACCTGG...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGGGGAGGGCTGGGGGCTaGGACTTGCTTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKGRAGG*DLLLAG
Trigger: CCCAGCCAGAAGCAAGTCCCAGCCCCCAGCCCTCCC...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470705.1
CDS-3UTR TCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATATGGGCAGGATCTCCTaGTTAGCCTTAAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDMGRIS*LALKSA
Trigger: GGCTGACTTTAAGGCTAATCAGGAGATCCTGCCCAT...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAATGGGCAGGATCTCCTaGTTAGCCTTAAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLMGRIS*LALKSA
Trigger: GGCTGACTTTAAGGCTAATCAGGAGATCCTGCCCAT...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp CAGCCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCAGGCACATTCATGAAATaGACCCGAGGGGACAACCCG +
Preference number: 4 (lower is better)
Translates to: QPTSSSAHDSLKPAQDCPGTFMK*TRGDNP
Trigger: CGGGTTGTCCCCTCGGGTTCATTTCATGAATGTGCC...TGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGAAAGGGCACATTCATaGAATGAACCCGAGGGGACA +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLERAHS*NEPEGT
Trigger: TGTCCCCTCGGGTTCATTTCATGAATGTGCCCTTTC...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR GCA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGATCCCCAGAAAGAGCTaGCCGAGCTCAACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGIPRKS*PSSTVG
Trigger: TCCCACAGTTGAGCTCGGGCAGCTCTTTCTGGGGAT...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATCCACGGAGTACTTGGTaGTCAGCTCTTCCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDPRSTW*SALPRL
Trigger: TAACCTTGGAAGAGCTGAGCACCAAGTACTCCGTGG...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAAGTCAGGATTTCCTTTaGCCTTTGGTGGCTATGGCC +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLSQDFL*PLVAMA
Trigger: GGCCATAGCCACCAAAGGGCAAAGGAAATCCTGACT...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCTTCAGTTCTGCACCATaGACCACAATGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCFSSAP*TTMALA
Trigger: TGCCAAAGCCATTGTGGTGCATGGTGCAGAACTGAA...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp ACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCTATGTCCTTCAGTTCTaGACCATGCACCACAATGGC +
Preference number: 4 (lower is better)
Translates to: TGFSRTMPLPAGLQLDAGYVLQF*TMHHNG
Trigger: GCCATTGTGGTGCATGGTGCAGAACTGAAGGACATA...GCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp GTAGGGAATGGCACAGAGCCACCAGGTTATCTTGAGTGGGTACATTCGCAGGGCCCCAGTGGAGGCGGATaGCCAGCAGATCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: VGNGTEPPGYLEWVHSQGPSGGG*PADQQA
Trigger: GGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGG...GCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGACCATGCCCCTCCCTaGGGGGCTCCAGCTAGATGC +
Preference number: 4 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPDHAPP*GAPARC
Trigger: GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTC...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCTTTAGGTCTTCGTCTTaGACTCTGGTCATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSFRSSS*TLVMGS
Trigger: GCTCCCCATGACCAGAGTCCAAGACGAAGACCTAAA...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCATTTCCTTTGCCCTTTaGTGGCTATGGCCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCISFAL*WLWPFV
Trigger: GACAAAGGGCCATAGCCACCAAAGGGCAAAGGAAAT...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCCCACAAAGCAGAGAATaGCCCCAGTCCATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSPQSRE*PQSIVG
Trigger: TCCTACTATGGACTGGGGCCATTCTCTGCTTTGTGG...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATCCACAAAGCAGAGAATaGCCCCAGTCCATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDPQSRE*PQSIVG
Trigger: TCCTACTATGGACTGGGGCCATTCTCTGCTTTGTGG...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCCGTCTTTGGGTTCCTTaGAAGCCTCTTCATGATGTC +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCRLWVP*KPLHDV
Trigger: GACATCATGAAGAGGCTTCCAAGGAACCCAAAGACG...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTATATTTATCTTCCCAGTaGAGGCGGATGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLYLSSQ*RRMPSR
Trigger: TCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATA...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCATAGGCCATGCCAATaGGACGGTGGTTCACCAGAT +
Preference number: 4 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGHRPCQ*DGGSPD
Trigger: ATCTGGTGAACCACCGTCTCATTGGCATGGCCTATG...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000469023.5
CDS-3UTR GCA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCTTCAGTTCTGCACCATaGACCACAATGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSFSSAP*TTMALA
Trigger: TGCCAAAGCCATTGTGGTGCATGGTGCAGAACTGAA...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTCCCAGTGGAGGCGGATaGCCAGCAGATCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPPSGGG*PADQQA
Trigger: GGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGG...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTATTGTTTCTCATGCCCTaGTGGAAAAGTGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLLFLMP*WKSELR
Trigger: CCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAA...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCGATTCAGCAGGACCATaGCCCTCCCTGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPDSAGP*PSLRGS
Trigger: GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATC...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp TCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCTCAGGGGAGCGGCTCTaGGGTTCTGACTCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SRHLLSRLATGFSRTMPLSGERL*GSDSPV
Trigger: GACTGGGGAGTCAGAACCCCAGAGCCGCTCCCCTGA...GAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCATCCTTGCCAACTGGATaGCGAGAGAGCAGAAATAGT +
Preference number: 4 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDASLPTG*RESRNS
Trigger: ACTATTTCTGCTCTCTCGCCATCCAGTTGGCAAGGA...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp ACTGGCATCGACCTTGCTGATAGGGATCTTAAGCCGGGCAGCGACTTCCTCTGCGAACTTGAGGAGGGCTaGCTCGGAAGCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: TGIDLADRDLKPGSDFLCELEEG*LGSITC
Trigger: ACAGGTGATGCTTCCGAGTCAGCCCTCCTCAAGTTC...GCAGAGGAAGTCGCTGCCCGGCTTAAGATCCCTATCAGCAAGGTCGATGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp GGGAGGTCCGAGCAAACACGATCTCAGGGTGGTTCTGGAGGATCTGATCAAGCTACGGCTCCCAGCCTCTaGCATCCCTCGACAATGATG +
Preference number: 4 (lower is better)
Translates to: GRSEQTRSQGGSGGSDQATAPSL*HPSTMM
Trigger: CATCATTGTCGAGGGATGTCAGAGGCTGGGAGCCGT...AGCTTGATCAGATCCTCCAGAACCACCCTGAGATCGTGTTTGCTCGGACCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp ACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCCATCATAGACGAAGATaGGAATACTGTAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: TGFSRTMPLPAGLQLDAGHHRRR*EYCREW
Trigger: CCATTCCCTACAGTATTCTCATCTTCGTCTATGATG...GCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp GTAGGGAATGGCACAGAGCCACCAGGTTATCTTGAGTGGGTACATTCGCAGGGCCAGCCATCCGGGTGCTaGCGGATGAGGAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VGNGTEPPGYLEWVHSQGQPSGC*RMRSFL
Trigger: CAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTG...GCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCTCATCCTCTGCCCATaGTTCCCTCAAGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSLILCP*FPQASP
Trigger: TGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAG...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp CCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTCATCCTCTGCCCATaGTTCCCTCAAGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PDIYCLDWLRDSAGPCPSLILCP*FPQASP
Trigger: TGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAG...GGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAAGCCTCCGAACAGTTaGTTACAGAATTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCKPPNS*LQNLTH
Trigger: ATGGGTCAAATTCTGTAAGCAACTGTTCGGAGGCTT...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCGATTCAGCAGGACCATaGCCCTCCCTGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPDSAGP*PSLRGS
Trigger: GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATC...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp AGAGCCTGGATCATCCCAGATTATCCGTCTTTGGGTTCCTTGGAAGCCTCTTCAGATTCAGCAGGACCATaGCCCTCCCTGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RAWIIPDYPSLGSLEASSDSAGP*PSLRGS
Trigger: GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATC...TGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGGATGATCCAGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CCA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGCTTCGTCTTGGACTCTaGTCATGGGGAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRLRLGL*SWGATV
Trigger: GACAGTGGCTCCCCATGACCAGAGTCCAAGACGAAG...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAATTTACTGTCTAGACTaGCTACGGGATTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLIYCLD*LRDSAG
Trigger: TCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp CAGCCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCAGCTAGGTCGCCTTTGTaGGTTCTGTACCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: QPTSSSAHDSLKPAQDCPARSPL*VLYLVL
Trigger: AAGTACCAGGTACAGAACCCACAAAGGCGACCTAGC...TGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp ACTGGCATCGACCTTGCTGATAGGGATCTTAAGCCGGGCAGCGACTTCCTCTGCAGGCAGGAGAATCGCTaGAACCCTGGAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TGIDLADRDLKPGSDFLCRQENR*NPGSRG
Trigger: ACCTCTGCTTCCAGGGTTCCAGCGATTCTCCTGCCT...GCAGAGGAAGTCGCTGCCCGGCTTAAGATCCCTATCAGCAAGGTCGATGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp GTAGGGAATGGCACAGAGCCACCAGGTTATCTTGAGTGGGTACATTCGCAGGGCGCAGGAAACAAGAGGTaGAGCGTAACCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VGNGTEPPGYLEWVHSQGAGNKR*SVTRCL
Trigger: GAGGCACCTGGTTACGCTTCACCTCTTGTTTCCTGC...GCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR TCA 90 bp GTAGGGAATGGCACAGAGCCACCAGGTTATCTTGAGTGGGTACATTCGCAGGGCCTGTGGGAAGAAAGCTaGGAGAGTGAGGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: VGNGTEPPGYLEWVHSQGLWEES*ESEARG
Trigger: TCCCCTTGCCTCACTCTCTCAGCTTTCTTCCCACAG...GCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR TCA 90 bp CAGCCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCAGTTGCTTACAGAATTTaGCCCATTCTGGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QPTSSSAHDSLKPAQDCPVAYRI*PILEWW
Trigger: CCACCACTCCAGAATGGGTCAAATTCTGTAAGCAAC...TGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR TCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATTTAGCTGTAATGGGATaGTCTCCTGTTACCATGATC +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDLAVMG*SPVTMI
Trigger: GATCATGGTAACAGGAGATCATCCCATTACAGCTAA...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp CAGCCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCAAGGCCGTTTGGCATGTaGACTCCACAACTTTTCGTT +
Preference number: 4 (lower is better)
Translates to: QPTSSSAHDSLKPAQDCPRPFGM*TPQLFV
Trigger: AACGAAAAGTTGTGGAGTTCACATGCCAAACGGCCT...TGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp GGGAGGTCCGAGCAAACACGATCTCAGGGTGGTTCTGGAGGATCTGATCAAGCTACTCCTGACCTCAGGTaGTCTACCAACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRSEQTRSQGGSGGSDQATPDLR*STNLGL
Trigger: GAGGCCAAGGTTGGTAGATCACCTGAGGTCAGGAGT...AGCTTGATCAGATCCTCCAGAACCACCCTGAGATCGTGTTTGCTCGGACCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR GCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATAGACTTTGTTTCTCATaGCCTGCTGGAAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDRLCFS*PAGKVS
Trigger: ACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCT...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp AGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCAGCTCTCACAACACCCGATTCAGCAGGACCATaGCCCTCCCTGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RCCVKLIISGPIPALTTPDSAGP*PSLRGS
Trigger: GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATC...GGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGAAACATAAAAGCCTCTaGCTTGCCTCCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGKHKSL*LASFMG
Trigger: CCCCATGAAGGAGGCAAGGCAGAGGCTTTTATGTTT...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp CCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCGCCACGAGAAGAGAGTaGTGGGGAGAGAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: PDIYCLDWLRDSAGPCPSATRRE*WGENEG
Trigger: TCCCTCATTCTCTCCCCACCACTCTCTTCTCGTGGC...GGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCGCAGCGATAGGTGTCTaGCCAACCGCCAGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPAAIGV*PTARPD
Trigger: GTCAGGCCTGGCGGTTGGCCAGACACCTATCGCTGC...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp TCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCATCAGTACGTGGGTCTaGGAGCTGTCCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SRHLLSRLATGFSRTMPLISTWV*ELSSRR
Trigger: CCTTCGGGAGGACAGCTCCCAGACCCACGTACTGAT...GAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp CTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATTCTGATCAAGCTGCTTaGACTGTATGTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LATGFSRTMPLPAGLQLDSDQAA*TVCPSV
Trigger: AACTGAAGGACATACAGTCCAAGCAGCTTGATCAGA...ATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp GTAGGGAATGGCACAGAGCCACCAGGTTATCTTGAGTGGGTACATTCGCAGGGCGGCCACGTCCATGCCTaGAGTGTAGGACAGAAATGC +
Preference number: 4 (lower is better)
Translates to: VGNGTEPPGYLEWVHSQGGHVHA*SVGQKC
Trigger: GCATTTCTGTCCTACACTCCAGGCATGGACGTGGCC...GCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGCCAGGTTATCTTGAGTaGGTACATTCGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRPGYLE*VHSQGH
Trigger: GTGGCCCTGCGAATGTACCCACTCAAGATAACCTGG...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCGAGTCCTTGTGGCTGTaGTGGGGGAGGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPESLWL*WGRERA
Trigger: TGCCCTTTCCCTCCCCCACCACAGCCACAAGGACTC...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTCTGTGGGAAGAAAGCTaGGAGAGTGAGGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPLWEES*ESEARG
Trigger: TCCCCTTGCCTCACTCTCTCAGCTTTCTTCCCACAG...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR TCA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAATTTGTGATCATCCATaGCCACTTCCTTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLICDHP*PLPSSV
Trigger: AACTGAAGAAGGAAGTGGTCATGGATGATCACAAAT...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR TCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGGGCGGGTGGATTGCTTaGGGTCAGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKGGWIA*GQEFKT
Trigger: AGTCTTGAACTCCTGACCTCAAGCAATCCACCCGCC...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp CCCTTGGAGAAGCTGCTAGGCAGATTCAAGAAGCAGAAGCCTAGCACACGTTCCAGTGAGGAGGCGGAGTaGGCTTCAAGGATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PLEKLLGRFKKQKPSTRSSEEAE*ASRIWE
Trigger: TTCCCAGATCCTTGAAGCTCACTCCGCCTCCTCACT...GGAACGTGTGCTAGGCTTCTGCTTCTTGAATCTGCCTAGCAGCTTCTCCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR GCA 90 bp CCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCATGAGATCCGCCCACTaGACAACCACGATGGTGACA +
Preference number: 4 (lower is better)
Translates to: PDIYCLDWLRDSAGPCPSMRSAH*TTTMVT
Trigger: TGTCACCATCGTGGTTGTGCAGTGGGCGGATCTCAT...GGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp CATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTGACCATGCCCCTCCCTaGGGGGCTCCAGCTAGATGC +
Preference number: 4 (lower is better)
Translates to: HDSLKPAQDCPSFSSKIIDHAPP*GAPARC
Trigger: GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTC...AATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGCCTGGAAGCAGAGGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKPGSRG*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACCTCTGCTTCCAGG...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp GTAGGGAATGGCACAGAGCCACCAGGTTATCTTGAGTGGGTACATTCGCAGGGCCAGTCTGTTCTTCAGTaGTGTCGGCCTCATACACGG +
Preference number: 4 (lower is better)
Translates to: VGNGTEPPGYLEWVHSQGQSVLQ*CRPHTR
Trigger: CCGTGTATGAGGCCGACACCACTGAAGAACAGACTG...GCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp CCCTTGGAGAAGCTGCTAGGCAGATTCAAGAAGCAGAAGCCTAGCACACGTTCCGCACCACAATGGCTTTaGCAGCACTGGCATCGACCT +
Preference number: 4 (lower is better)
Translates to: PLEKLLGRFKKQKPSTRSAPQWL*QHWHRP
Trigger: AGGTCGATGCCAGTGCTGCCAAAGCCATTGTGGTGC...GGAACGTGTGCTAGGCTTCTGCTTCTTGAATCTGCCTAGCAGCTTCTCCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATAAGCCAAGGAGATaGCAGGGACCATGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSHKPRR*QGPCQC
Trigger: GCACTGACATGGTCCCTGCCATCTCCTTGGCTTATG...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGAGGCCACGTCCATGCCTaGAGTGTAGGACAGAAATGC +
Preference number: 4 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRGHVHA*SVGQKC
Trigger: GCATTTCTGTCCTACACTCCAGGCATGGACGTGGCC...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp CCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCCAGGTTATCTTGAGTaGGTACATTCGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PDIYCLDWLRDSAGPCPSPGYLE*VHSQGH
Trigger: GTGGCCCTGCGAATGTACCCACTCAAGATAACCTGG...GGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp CAGCCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCAATTTACTGTCTAGACTaGCTACGGGATTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QPTSSSAHDSLKPAQDCPIYCLD*LRDSAG
Trigger: TCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT...TGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCTTGTGGCTGTGGTaGGGGAGGGAAAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPSLWLW*GRERAH
Trigger: ATGTGCCCTTTCCCTCCCCCACCACAGCCACAAGGA...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGCTCCCCAGTCAAGGATaGGTTGTCCACCTTACATCC +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKLPSQG*VVHLTS
Trigger: GGATGTAAGGTGGACAACTCATCCTTGACTGGGGAG...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR TCA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGCCAACCGCCAGGCCTaGCGTCAGGGAGGCAATTCT +
Preference number: 4 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSANRQA*RQGGNS
Trigger: AGAATTGCCTCCCTGACGTCAGGCCTGGCGGTTGGC...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR TCA 90 bp GGGAGGTCCGAGCAAACACGATCTCAGGGTGGTTCTGGAGGATCTGATCAAGCTTGGTTCTGGAGGATCTaGTCAAGCTGCTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: GRSEQTRSQGGSGGSDQAWFWRI*SSCLDC
Trigger: ACAGTCCAAGCAGCTTGATCAGATCCTCCAGAACCA...AGCTTGATCAGATCCTCCAGAACCACCCTGAGATCGTGTTTGCTCGGACCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGACACCCCTGTGTCACATaGAGCTCTTCATCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRHPCVT*SSSSAE
Trigger: CTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTG...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCATCCTCTGCCCATaGTTCCCTCAAGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPLILCP*FPQASP
Trigger: TGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAG...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp TCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGGATCATCCCTGTaGATGACAGAGTTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRHLLSRLATGFSRTMPLPGSSL*MTELQD
Trigger: GTCCTGCAACTCTGTCATTCACAGGGATGATCCAGG...GAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470705.1
CDS-3UTR GCA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGATCACCTTAATTCCTaGACTGCGACACTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRDHLNS*TATLAH
Trigger: GTGAGCAAGTGTCGCAGTGCAGGAATTAAGGTGATC...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCGCCACGAGAAGAGAGTaGTGGGGAGAGAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPATRRE*WGENEG
Trigger: TCCCTCATTCTCTCCCCACCACTCTCTTCTCGTGGC...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGACACCATGCACCACAATaGCTTTGGCAGCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRHHAPQ*LWQHWH
Trigger: ATGCCAGTGCTGCCAAAGCCATTGTGGTGCATGGTG...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGTCTGATCAAGCTGCTTaGACTGTATGTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGSDQAA*TVCPSV
Trigger: AACTGAAGGACATACAGTCCAAGCAGCTTGATCAGA...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGAATACTGTAGGGAATaGCACAGAGCCACCAGGTTA +
Preference number: 4 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLREYCRE*HRATRL
Trigger: TAACCTGGTGGCTCTGTGCCATTCCCTACAGTATTC...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTCTGTCCTCCCGAAGGTaGATGGACATCTTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPLSSRR*MDIFVG
Trigger: ACCCACAAAGATGTCCATCCACCTTCGGGAGGACAG...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CCA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTAATCCAGCCAGAGCCTaGATCATCCCAGATTATCCG +
Preference number: 4 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSNPARA*IIPDYP
Trigger: CGGATAATCTGGGATGATCCAGGCTCTGGCTGGATT...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR TCA 90 bp CCCTTGGAGAAGCTGCTAGGCAGATTCAAGAAGCAGAAGCCTAGCACACGTTCCTGGTTCTGGAGGATCTaGTCAAGCTGCTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: PLEKLLGRFKKQKPSTRSWFWRI*SSCLDC
Trigger: ACAGTCCAAGCAGCTTGATCAGATCCTCCAGAACCA...GGAACGTGTGCTAGGCTTCTGCTTCTTGAATCTGCCTAGCAGCTTCTCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCACGGCTCCCAGCCTCTaGCATCCCTCGACAATGATG +
Preference number: 4 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSTAPSL*HPSTMM
Trigger: CATCATTGTCGAGGGATGTCAGAGGCTGGGAGCCGT...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCCTCATCCTCTGCCCATaGTTCCCTCAAGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSLILCP*FPQASP
Trigger: TGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAG...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGACGACGGACAGTACGATaGTCAGGTAGAGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRRRTVR*SGRGCL
Trigger: AAGACAACCTCTACCTGAGCATCGTACTGTCCGTCG...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTCACCTTACATCCTTGTaGAGAGATAAGCCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPHLTSL*RDKPEV
Trigger: GACCTCCGGCTTATCTCTGCACAAGGATGTAAGGTG...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp CCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCTTGTTTCTCATGCCCTaGTGGAAAAGTGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: PDIYCLDWLRDSAGPCPSLFLMP*WKSELR
Trigger: CCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAA...GGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGAAGCCAGCCCAGGATTaGCCATCTTTCTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKKPAQD*PSFSSK
Trigger: CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGAGCTCACTGCAACCTCTaGCTCTGGGTTCAAGTGATT +
Preference number: 4 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRAHCNL*LWVQVI
Trigger: AATCACTTGAACCCAGAGGCAGAGGTTGCAGTGAGC...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp AGAGCCTGGATCATCCCAGATTATCCGTCTTTGGGTTCCTTGGAAGCCTCTTCAGGTCCACGGAGTACTTaGTGCTCAGCTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RAWIIPDYPSLGSLEASSGPRST*CSALPR
Trigger: CCTTGGAAGAGCTGAGCACCAAGTACTCCGTGGACC...TGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGGATGATCCAGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CCA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAAACAAAGGTTGTCCATaGGGAAATTTATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDANKGCP*GNLFHL
Trigger: CAGATGAAATAAATTTCCCCATGGACAACCTTTGTT...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCATAATCCCAGCCACTTaGGAGGCTAAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SRHLLSRLATGFSRTMPLIIPAT*EAKAGE
Trigger: TTCTCCTGCCTTAGCCTCCCAAGTGGCTGGGATTAT...GAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp CCCTTGGAGAAGCTGCTAGGCAGATTCAAGAAGCAGAAGCCTAGCACACGTTCCGTTGCTTACAGAATTTaGCCCATTCTGGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLEKLLGRFKKQKPSTRSVAYRI*PILEWW
Trigger: CCACCACTCCAGAATGGGTCAAATTCTGTAAGCAAC...GGAACGTGTGCTAGGCTTCTGCTTCTTGAATCTGCCTAGCAGCTTCTCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR TCA 90 bp AGAGCCTGGATCATCCCAGATTATCCGTCTTTGGGTTCCTTGGAAGCCTCTTCACTCCCCAGTCAAGGATaGGTTGTCCACCTTACATCC +
Preference number: 4 (lower is better)
Translates to: RAWIIPDYPSLGSLEASSLPSQG*VVHLTS
Trigger: GGATGTAAGGTGGACAACTCATCCTTGACTGGGGAG...TGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGGATGATCCAGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR TCA 90 bp GGTGAGGGCTTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGTGGTTCTGGAGGATCTaGTCAAGCTGCTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: GEGFSRHLLSRLATGFSRWFWRI*SSCLDC
Trigger: ACAGTCCAAGCAGCTTGATCAGATCCTCCAGAACCA...CCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAAGCCCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368081.9
CDS-3UTR TCA 90 bp TCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCAGGCCGTTTGGCATGTaGACTCCACAACTTTTCGTT +
Preference number: 4 (lower is better)
Translates to: SRHLLSRLATGFSRTMPLRPFGM*TPQLFV
Trigger: AACGAAAAGTTGTGGAGTTCACATGCCAAACGGCCT...GAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGCATCATAGACGAAGATaGGAATACTGTAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRHHRRR*EYCREW
Trigger: CCATTCCCTACAGTATTCTCATCTTCGTCTATGATG...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp ACCTGTGTTCTGGGGCTAGCAAGAATGCATTATGACCTCAGGTCAGTCCATTTACAGCCATCCGGGTGCTaGCGGATGAGGAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TCVLGLARMHYDLRSVHLQPSGC*RMRSFL
Trigger: CAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTG...TAAATGGACTGACCTGAGGTCATAATGCATTCTTGCTAGCCCCAGAACACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCCAGCCATCCGGGTGCTaGCGGATGAGGAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVQPSGC*RMRSFL
Trigger: CAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTG...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCCACCTTACATCCTTGTaGAGAGATAAGCCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPHLTSL*RDKPEV
Trigger: GACCTCCGGCTTATCTCTGCACAAGGATGTAAGGTG...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGTATGTCCTTCAGTTCTaGACCATGCACCACAATGGC +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKYVLQF*TMHHNG
Trigger: GCCATTGTGGTGCATGGTGCAGAACTGAAGGACATA...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTTTGTTTCTCATGCCCTaGTGGAAAAGTGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPLFLMP*WKSELR
Trigger: CCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAA...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTTTAGGTCTTCGTCTTaGACTCTGGTCATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPFRSSS*TLVMGS
Trigger: GCTCCCCATGACCAGAGTCCAAGACGAAGACCTAAA...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp AGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCAGCTCTCACAACACCCGGTCCACGGAGTACTTaGTGCTCAGCTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RCCVKLIISGPIPALTTPGPRST*CSALPR
Trigger: CCTTGGAAGAGCTGAGCACCAAGTACTCCGTGGACC...GGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCGCCCTTTGGTGGCTATaGCCCTTTGTCAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVALWWL*PFVRST
Trigger: CGTGGACCTGACAAAGGGCCATAGCCACCAAAGGGC...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCTCCTTTGCCCTTTGGTaGCTATGGCCCTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPSFALW*LWPFVR
Trigger: CCTGACAAAGGGCCATAGCCACCAAAGGGCAAAGGA...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp AAGCTGCTAGGCAGATTCAAGAAGCAGAAGCCTAGCACACGTTCCCCCAGACCTCGTCTTTGGGTTCCTTaGAAGCCTCTTCATGATGTC +
Preference number: 4 (lower is better)
Translates to: KLLGRFKKQKPSTRSPRPRLWVP*KPLHDV
Trigger: GACATCATGAAGAGGCTTCCAAGGAACCCAAAGACG...AGGTCTGGGGGAACGTGTGCTAGGCTTCTGCTTCTTGAATCTGCCTAGCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGGAATACTGTAGGGAATaGCACAGAGCCACCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKEYCRE*HRATRL
Trigger: TAACCTGGTGGCTCTGTGCCATTCCCTACAGTATTC...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp AAGCTGCTAGGCAGATTCAAGAAGCAGAAGCCTAGCACACGTTCCCCCAGACCTAAAAGGAGCTCTCCATaGGGTTCCTCTTGTGATGGA +
Preference number: 4 (lower is better)
Translates to: KLLGRFKKQKPSTRSPRPKRSSP*GSSCDG
Trigger: TCCATCACAAGAGGAACCCCATGGAGAGCTCCTTTT...AGGTCTGGGGGAACGTGTGCTAGGCTTCTGCTTCTTGAATCTGCCTAGCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTTTAGCTGTAATGGGATaGTCTCCTGTTACCATGATC +
Preference number: 4 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSLAVMG*SPVTMI
Trigger: GATCATGGTAACAGGAGATCATCCCATTACAGCTAA...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTTGGAAGCCTCTTCATaGTGTCGCTTTCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPLEASS*CRFQLT
Trigger: AGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAA...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCCACGGAGTACTTGGTaGTCAGCTCTTCCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPPRSTW*SALPRL
Trigger: TAACCTTGGAAGAGCTGAGCACCAAGTACTCCGTGG...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCGATCACCTTAATTCCTaGACTGCGACACTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPDHLNS*TATLAH
Trigger: GTGAGCAAGTGTCGCAGTGCAGGAATTAAGGTGATC...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCCAGTGCCGAGATCAATaGAGAGGATGGTTATGGTTC +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPQCRDQ*RGWLWF
Trigger: GAACCATAACCATCCTCTGCATTGATCTCGGCACTG...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp CCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCAGACTTTGTTTCTCATaGCCTGCTGGAAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PDIYCLDWLRDSAGPCPSRLCFS*PAGKVS
Trigger: ACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCT...GGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCGCCCTTTGGTGGCTATaGCCCTTTGTCAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPALWWL*PFVRST
Trigger: CGTGGACCTGACAAAGGGCCATAGCCACCAAAGGGC...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCCAGTCTGTTCTTCAGTaGTGTCGGCCTCATACACGG +
Preference number: 4 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSQSVLQ*CRPHTR
Trigger: CCGTGTATGAGGCCGACACCACTGAAGAACAGACTG...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTTCATCATCAGTACGTaGGTCTGGGAGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSFIIST*VWELSS
Trigger: GGAGGACAGCTCCCAGACCCACGTACTGATGATGAA...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp AGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCAGCTCTCACAACACCCCACCATGCACCACAATaGCTTTGGCAGCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: RCCVKLIISGPIPALTTPHHAPQ*LWQHWH
Trigger: ATGCCAGTGCTGCCAAAGCCATTGTGGTGCATGGTG...GGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp AGAGCCTGGATCATCCCAGATTATCCGTCTTTGGGTTCCTTGGAAGCCTCTTCATATTTATCTTCCCAGTaGAGGCGGATGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RAWIIPDYPSLGSLEASSYLSSQ*RRMPSR
Trigger: TCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATA...TGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGGATGATCCAGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CCA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCGGCCACGTCCATGCCTaGAGTGTAGGACAGAAATGC +
Preference number: 4 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVGHVHA*SVGQKC
Trigger: GCATTTCTGTCCTACACTCCAGGCATGGACGTGGCC...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGTGTGGGTTCTGTACCTaGTACTTGTTGGTAGAATTA +
Preference number: 4 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRCGFCT*YLLVEL
Trigger: TAATTCTACCAACAAGTACCAGGTACAGAACCCACA...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCAGTTCAAGACTAGCCTaGCCAGCATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSSSRLA*PAWQNP
Trigger: GGGGTTTTGCCATGCTGGCCAGGCTAGTCTTGAACT...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGTCCAAGGTTAATTTGTaGTCATCCATGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKSKVNL*SSMTTS
Trigger: GGAAGTGGTCATGGATGATCACAAATTAACCTTGGA...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR TCA 90 bp AGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCAGCTCTCACAACACCCATGGGCAGGATCTCCTaGTTAGCCTTAAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RCCVKLIISGPIPALTTPMGRIS*LALKSA
Trigger: GGCTGACTTTAAGGCTAATCAGGAGATCCTGCCCAT...GGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATTAGCTGTAATGGGATaGTCTCCTGTTACCATGATC +
Preference number: 4 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRLAVMG*SPVTMI
Trigger: GATCATGGTAACAGGAGATCATCCCATTACAGCTAA...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCAGGCCGTTTGGCATGTaGACTCCACAACTTTTCGTT +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPRPFGM*TPQLFV
Trigger: AACGAAAAGTTGTGGAGTTCACATGCCAAACGGCCT...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTCATCATAGACGAAGATaGGAATACTGTAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPHHRRR*EYCREW
Trigger: CCATTCCCTACAGTATTCTCATCTTCGTCTATGATG...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGAAGCCTCCGAACAGTTaGTTACAGAATTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKKPPNS*LQNLTH
Trigger: ATGGGTCAAATTCTGTAAGCAACTGTTCGGAGGCTT...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR GCA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGAGACTTTGTTTCTCATaGCCTGCTGGAAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKRLCFS*PAGKVS
Trigger: ACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCT...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp ACCTGTGTTCTGGGGCTAGCAAGAATGCATTATGACCTCAGGTCAGTCCATTTAGTGATGGACAGGAAATaGCCGCTAGGTCGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: TCVLGLARMHYDLRSVHLVMDRK*PLGRLC
Trigger: ACAAAGGCGACCTAGCGGGCATTTCCTGTCCATCAC...TAAATGGACTGACCTGAGGTCATAATGCATTCTTGCTAGCCCCAGAACACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCGAGAGAAGCCTAGGGTaGAAGGATAAAAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPERSLG*KDKKVE
Trigger: CTCTACCTTTTTATCCTTCCACCCTAGGCTTCTCTC...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTTCCTTTGCCCTTTGGTaGCTATGGCCCTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSSFALW*LWPFVR
Trigger: CCTGACAAAGGGCCATAGCCACCAAAGGGCAAAGGA...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp CCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCAGGTGGATGGACATCTaGTACTTGTTGGTAGAATTA +
Preference number: 4 (lower is better)
Translates to: PDIYCLDWLRDSAGPCPSRWMDI*YLLVEL
Trigger: TAATTCTACCAACAAGTACCAGATGTCCATCCACCT...GGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368081.9
CDS-3UTR CCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTATTTATCTTCCCAGTaGAGGCGGATGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSYLSSQ*RRMPSR
Trigger: TCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATA...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTTGTGGGTTCTGTACCTaGTACTTGTTGGTAGAATTA +
Preference number: 4 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSCGFCT*YLLVEL
Trigger: TAATTCTACCAACAAGTACCAGGTACAGAACCCACA...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCGTGATCTACCAACCTTaGCCTCGGAAACTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVVIYQP*PRKLLG
Trigger: TCCCAGCAGTTTCCGAGGCCAAGGTTGGTAGATCAC...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTCCTCCCGAAGGTGGATaGACATCTAGGGAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSPPEGG*TSRESK
Trigger: TTTGCTCTCCCTAGATGTCCATCCACCTTCGGGAGG...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTCCTCCCGAAGGTGGATaGACATCTTTGTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSPPEGG*TSLWVL
Trigger: CAGAACCCACAAAGATGTCCATCCACCTTCGGGAGG...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR TCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCATTTCATCGTTCATTaGGTACTCCTGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPHFIVH*VLLPIQ
Trigger: CTGAATGGGCAGGAGTACTCAATGAACGATGAAATG...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp AGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCAGCTCTCACAACACCCTTGGAAGCCTCTTCATaGTGTCGCTTTCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: RCCVKLIISGPIPALTTPLEASS*CRFQLT
Trigger: AGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAA...GGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCCACCCCTGTGTCACATaGAGCTCTTCATCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPHPCVT*SSSSAE
Trigger: CTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTG...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCGATCATCCCTGTGAATaGCAGAGTTGCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPDHPCE*QSCRTG
Trigger: CCCTGTCCTGCAACTCTGTCATTCACAGGGATGATC...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470705.1
CDS-3UTR GCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCGATCACCTTAATTCCTaGACTGCGACACTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSDHLNS*TATLAH
Trigger: GTGAGCAAGTGTCGCAGTGCAGGAATTAAGGTGATC...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp AGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCAGCTCTCACAACACCCTTCAGTTCTGCACCATaGACCACAATGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: RCCVKLIISGPIPALTTPFSSAP*TTMALA
Trigger: TGCCAAAGCCATTGTGGTGCATGGTGCAGAACTGAA...GGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCATGAGATCCGCCCACTaGACAACCACGATGGTGACA +
Preference number: 4 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPMRSAH*TTTMVT
Trigger: TGTCACCATCGTGGTTGTGCAGTGGGCGGATCTCAT...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp AGAGCCTGGATCATCCCAGATTATCCGTCTTTGGGTTCCTTGGAAGCCTCTTCAGAGAGAAGCCTAGGGTaGAAGGATAAAAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RAWIIPDYPSLGSLEASSERSLG*KDKKVE
Trigger: CTCTACCTTTTTATCCTTCCACCCTAGGCTTCTCTC...TGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGGATGATCCAGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CCA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCCCTCCCGAAGGTGGATaGACATCTGGTACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPPPEGG*TSGTCW
Trigger: CCAACAAGTACCAGATGTCCATCCACCTTCGGGAGG...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368081.9
CDS-3UTR CCA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCTTCATCATCAGTACGTaGGTCTGGGAGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPFIIST*VWELSS
Trigger: GGAGGACAGCTCCCAGACCCACGTACTGATGATGAA...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp AGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCAGCTCTCACAACACCCATGCCAATGAGACGGTaGTTCACCAGATTATCCGTC +
Preference number: 4 (lower is better)
Translates to: RCCVKLIISGPIPALTTPMPMRR*FTRLSV
Trigger: GACGGATAATCTGGTGAACCACCGTCTCATTGGCAT...GGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000469023.5
CDS-3UTR CCA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTTGCATCCTTGCCAACTaGATGGCGAGAGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSCILAN*MAREQK
Trigger: TTTCTGCTCTCTCGCCATCCAGTTGGCAAGGATGCA...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp AGAGCCTGGATCATCCCAGATTATCCGTCTTTGGGTTCCTTGGAAGCCTCTTCATCCAAGGTTAATTTGTaGTCATCCATGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: RAWIIPDYPSLGSLEASSSKVNL*SSMTTS
Trigger: GGAAGTGGTCATGGATGATCACAAATTAACCTTGGA...TGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGGATGATCCAGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR TCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCCATTTCATCGTTCATTaGGTACTCCTGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSHFIVH*VLLPIQ
Trigger: CTGAATGGGCAGGAGTACTCAATGAACGATGAAATG...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCATCATAGACGAAGATaGGAATACTGTAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPHHRRR*EYCREW
Trigger: CCATTCCCTACAGTATTCTCATCTTCGTCTATGATG...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTTTCCTCTTGATCTCTaGTGTATGAAAAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPFPLDL*CMKRSS
Trigger: AGAGCTCCTTTTCATACATCAGAGATCAAGAGGAAA...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR GCA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCTATGTCCTTCAGTTCTaGACCATGCACCACAATGGC +
Preference number: 4 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVYVLQF*TMHHNG
Trigger: GCCATTGTGGTGCATGGTGCAGAACTGAAGGACATA...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTCAGTGCCGAGATCAATaGAGAGGATGGTTATGGTTC +
Preference number: 4 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSQCRDQ*RGWLWF
Trigger: GAACCATAACCATCCTCTGCATTGATCTCGGCACTG...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR GCA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCTTGTTTCTCATGCCCTaGTGGAAAAGTGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVLFLMP*WKSELR
Trigger: CCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAA...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp AAGCTGCTAGGCAGATTCAAGAAGCAGAAGCCTAGCACACGTTCCCCCAGACCTCTTTTTCCAGAAAACTaGAGCCTGGTATTATTTGCA +
Preference number: 4 (lower is better)
Translates to: KLLGRFKKQKPSTRSPRPLFPEN*SLVLFA
Trigger: TGCAAATAATACCAGGCTGCAGTTTTCTGGAAAAAG...AGGTCTGGGGGAACGTGTGCTAGGCTTCTGCTTCTTGAATCTGCCTAGCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTATTTCCTTTGCCCTTTaGTGGCTATGGCCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSISFAL*WLWPFV
Trigger: GACAAAGGGCCATAGCCACCAAAGGGCAAAGGAAAT...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCTCTGATCAAGCTGCTTaGACTGTATGTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPSDQAA*TVCPSV
Trigger: AACTGAAGGACATACAGTCCAAGCAGCTTGATCAGA...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGAATACTGTAGGGAATaGCACAGAGCCACCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSEYCRE*HRATRL
Trigger: TAACCTGGTGGCTCTGTGCCATTCCCTACAGTATTC...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CCA 90 bp CATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTGAATACTGTAGGGAATaGCACAGAGCCACCAGGTTA +
Preference number: 4 (lower is better)
Translates to: HDSLKPAQDCPSFSSKIIEYCRE*HRATRL
Trigger: TAACCTGGTGGCTCTGTGCCATTCCCTACAGTATTC...AATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR TCA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCTTGGAAGCCTCTTCATaGTGTCGCTTTCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPLEASS*CRFQLT
Trigger: AGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAA...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp ATTTCATCTGTATTAAATGGGAATCCCTTGGAGAAGCTGCTAGGCAGATTCAAGCATAGGCCATGCCAATaGGACGGTGGTTCACCAGAT +
Preference number: 4 (lower is better)
Translates to: ISSVLNGNPLEKLLGRFKHRPCQ*DGGSPD
Trigger: ATCTGGTGAACCACCGTCTCATTGGCATGGCCTATG...CTTGAATCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAATACAGATGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR GCA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCAGCCTGGTATTATTTaGACAGGAATCTCCATTATC +
Preference number: 4 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPQPGII*TGISII
Trigger: GATAATGGAGATTCCTGTGCAAATAATACCAGGCTG...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR TCA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCCATTTCATCGTTCATTaGGTACTCCTGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPHFIVH*VLLPIQ
Trigger: CTGAATGGGCAGGAGTACTCAATGAACGATGAAATG...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCATTTACTGTCTAGACTaGCTACGGGATTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPIYCLD*LRDSAG
Trigger: TCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR GCA 90 bp ATTTCATCTGTATTAAATGGGAATCCCTTGGAGAAGCTGCTAGGCAGATTCAAGCAGTGCCGAGATCAATaGAGAGGATGGTTATGGTTC +
Preference number: 4 (lower is better)
Translates to: ISSVLNGNPLEKLLGRFKQCRDQ*RGWLWF
Trigger: GAACCATAACCATCCTCTGCATTGATCTCGGCACTG...CTTGAATCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAATACAGATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp ATTTCATCTGTATTAAATGGGAATCCCTTGGAGAAGCTGCTAGGCAGATTCAAGCGTCTTTGGGTTCCTTaGAAGCCTCTTCATGATGTC +
Preference number: 4 (lower is better)
Translates to: ISSVLNGNPLEKLLGRFKRLWVP*KPLHDV
Trigger: GACATCATGAAGAGGCTTCCAAGGAACCCAAAGACG...CTTGAATCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAATACAGATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CCA 90 bp ATTTCATCTGTATTAAATGGGAATCCCTTGGAGAAGCTGCTAGGCAGATTCAAGATGCCAATGAGACGGTaGTTCACCAGATTATCCGTC +
Preference number: 4 (lower is better)
Translates to: ISSVLNGNPLEKLLGRFKMPMRR*FTRLSV
Trigger: GACGGATAATCTGGTGAACCACCGTCTCATTGGCAT...CTTGAATCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAATACAGATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCAACAAAGGTTGTCCATaGGGAAATTTATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSNKGCP*GNLFHL
Trigger: CAGATGAAATAAATTTCCCCATGGACAACCTTTGTT...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR TCA 90 bp ATTTCATCTGTATTAAATGGGAATCCCTTGGAGAAGCTGCTAGGCAGATTCAAGAGCAAGAATGCATTATaGCCTCAGGTCAGTCCATTT +
Preference number: 4 (lower is better)
Translates to: ISSVLNGNPLEKLLGRFKSKNAL*PQVSPF
Trigger: AAATGGACTGACCTGAGGTCATAATGCATTCTTGCT...CTTGAATCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAATACAGATGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CCA 90 bp ATTTCATCTGTATTAAATGGGAATCCCTTGGAGAAGCTGCTAGGCAGATTCAAGAACAAAGGTTGTCCATaGGGAAATTTATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: ISSVLNGNPLEKLLGRFKNKGCP*GNLFHL
Trigger: CAGATGAAATAAATTTCCCCATGGACAACCTTTGTT...CTTGAATCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAATACAGATGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCGCTGGGGGCTGGGACTaGCTTCTGGCTGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSAGGWD*LLAGLV
Trigger: CACCAGCCCAGCCAGAAGCAAGTCCCAGCCCCCAGC...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470705.1
CDS-3UTR CAA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGACATCTCGCCCCAGGTaGAACCCAGCCCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRTSRPR*NPAPPP
Trigger: AGGAGGAGGGGCTGGGTTCAACCTGGGGCGAGATGT...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CAA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGTGCACCACAATGGCTTaGGCAGCACTGGCATCGACC +
Preference number: 5 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRCTTMA*AALAST
Trigger: GGTCGATGCCAGTGCTGCCAAAGCCATTGTGGTGCA...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS TCA 90 bp GTGTTCGATCTCAGCAGCGATAGGTGTCTGGCCAACCGCCAGGCCTaGCGTCAGGGAGGCAATTCTGCCCATCACTGTGGAGTCTCCCGT +
Preference number: 5 (lower is better)
Translates to: VFDLSSDRCLANRQA*RQGGNSAHHCGVSR
Trigger: ACGGGAGACTCCACAGTGATGGGCAGAATTGCCTCCCTGACGTCAGGCCTGGCGGTTGGCCAGACACCTATCGCTGCTGAGATCGAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGAGTCAGGATTTCCTTaGCCCTTTGGTGGCTATGGC +
Preference number: 5 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLESGFP*PFGGYG
Trigger: GCCATAGCCACCAAAGGGCAAAGGAAATCCTGACTC...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGCACTGGCATCGACCTaGCTGATAGGGATCTTAAGC +
Preference number: 5 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDAALAST*LIGILS
Trigger: GCTTAAGATCCCTATCAGCAAGGTCGATGCCAGTGC...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGTGCACCACAATGGCTTaGGCAGCACTGGCATCGACC +
Preference number: 5 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGCTTMA*AALAST
Trigger: GGTCGATGCCAGTGCTGCCAAAGCCATTGTGGTGCA...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCCTCCACAACTTTTCGTaGCTCATAGGTCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCLHNFS*LIGPLL
Trigger: CAGCAGTGGACCTATGAGCAACGAAAAGTTGTGGAG...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGCAAGCCAGCCCAGGATaGCCCATCTTTCTCATCCAA +
Preference number: 5 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRQASPG*PIFLIQ
Trigger: TTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTG...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCCAAGCCAGCCCAGGATaGCCCATCTTTCTCATCCAA +
Preference number: 5 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSQASPG*PIFLIQ
Trigger: TTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTG...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp CAGCCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCAAGGTCCACGGAGTACTaGGTGCTCAGCTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: QPTSSSAHDSLKPAQDCPRSTEY*VLSSSK
Trigger: CTTGGAAGAGCTGAGCACCAAGTACTCCGTGGACCT...TGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp GGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCCCAGTCAAGGATGAGTaGTCCACCTTACATCCTTGT +
Preference number: 5 (lower is better)
Translates to: GYGIQQDHAPPCGAPARCPVKDE*STLHPC
Trigger: ACAAGGATGTAAGGTGGACAACTCATCCTTGACTGG...GCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGGACTGCTCGATGAACTaGAGGAGGGCTGACTCGGAA +
Preference number: 5 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGDCSMN*RRADSE
Trigger: TTCCGAGTCAGCCCTCCTCAAGTTCATCGAGCAGTC...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGGTGGATGGACATCTTaGTGGGTTCTGTACCTGGTA +
Preference number: 5 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLGGWTS*WVLYLV
Trigger: TACCAGGTACAGAACCCACAAAGATGTCCATCCACC...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CAA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGAAGCCTCCGAACAGTaGCTTACAGAATTTGACCCA +
Preference number: 5 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDAEASEQ*LTEFDP
Trigger: TGGGTCAAATTCTGTAAGCAACTGTTCGGAGGCTTC...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp TACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCAGGTTAAATGGGAATCCCTaGGAGAAGCTGCTAGGCAGA +
Preference number: 5 (lower is better)
Translates to: YGIQQDHAPPCGAPARCRLNGNP*EKLLGR
Trigger: TCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAA...CCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TCCGGAGCACCCTTCATCATCAGTACGTGGGTCTGGGAGCTGTCCTCCCGAAGGGGGGGTTTCACCATGTaGGTCAGCCTGGTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: SGAPFIISTWVWELSSRRGGFTM*VSLVLN
Trigger: ATTCAAGACCAGGCTGACCAACATGGTGAAACCCCC...CCTTCGGGAGGACAGCTCCCAGACCCACGTACTGATGATGAAGGGTGCTCCGGA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS TCA 90 bp CTCCGCCACAGAGCTGTAAGACTGCTCGATGAACTTGAGGAGGGCTaGCTCGGAAGCATCACCTGTTGTGGCCCTCTTAGCAATGGGCAG +
Preference number: 5 (lower is better)
Translates to: LRHRAVRLLDELEEG*LGSITCCGPLSNGQ
Trigger: CTGCCCATTGCTAAGAGGGCCACAACAGGTGATGCTTCCGAGTCAGCCCTCCTCAAGTTCATCGAGCAGTCTTACAGCTCTGTGGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTGGTGGGGTAACAGTATaGGGTCCACCTCGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSGGVTV*GPPRVR
Trigger: CCTGACTCGAGGTGGACCCAATACTGTTACCCCACC...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp GGGAGGTCCGAGCAAACACGATCTCAGGGTGGTTCTGGAGGATCTGATCAAGCTTTAAAGTCAGCCCGGTaGCAGAGGCCAGCGATTCGG +
Preference number: 5 (lower is better)
Translates to: GRSEQTRSQGGSGGSDQALKSAR*QRPAIR
Trigger: CCGAATCGCTGGCCTCTGCAACCGGGCTGACTTTAA...AGCTTGATCAGATCCTCCAGAACCACCCTGAGATCGTGTTTGCTCGGACCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS CCA 90 bp TCCAAGATCCTCTCCGGAGCACCCTTCATCATCAGTACGTGGGTCTaGGAGCTGTCCTCCCGAAGGTGGATGGACATCTGGTACTTGTTG +
Preference number: 5 (lower is better)
Translates to: SKILSGAPFIISTWV*ELSSRRWMDIWYLL
Trigger: CAACAAGTACCAGATGTCCATCCACCTTCGGGAGGACAGCTCCCAGACCCACGTACTGATGATGAAGGGTGCTCCGGAGAGGATCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368081.9
CDS CCA 90 bp TCCAAGATCCTCTCCGGAGCACCCTTCATCATCAGTACGTGGGTCTaGGAGCTGTCCTCCCGAAGGTGGATGGACATCTTTGTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: SKILSGAPFIISTWV*ELSSRRWMDIFVGS
Trigger: AGAACCCACAAAGATGTCCATCCACCTTCGGGAGGACAGCTCCCAGACCCACGTACTGATGATGAAGGGTGCTCCGGAGAGGATCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CAA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCTTGGTAGGCTCCTCATaGAAATATATCTGGATGCTG +
Preference number: 5 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSLVGSS*KYIWML
Trigger: CAGCATCCAGATATATTTCAATGAGGAGCCTACCAA...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGTCGAATTACCAGAGCTaGCTGAGGCACCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGSNYQS*LRHHVL
Trigger: AAGAACATGGTGCCTCAGCAAGCTCTGGTAATTCGA...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp TGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCCAGGTATCAGAGCTCTaGGTAAATGTTTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: CLDWLRDSAGPCPSLRGSQVSEL*VNVFPV
Trigger: GACTGGAAAAACATTTACCAAGAGCTCTGATACCTG...GGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTTTAAAGTCAGCCCGGTaGCAGAGGCCAGCGATTCGG +
Preference number: 5 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPLKSAR*QRPAIR
Trigger: CCGAATCGCTGGCCTCTGCAACCGGGCTGACTTTAA...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTGACTGCTCGATGAACTaGAGGAGGGCTGACTCGGAA +
Preference number: 5 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSDCSMN*RRADSE
Trigger: TTCCGAGTCAGCCCTCCTCAAGTTCATCGAGCAGTC...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTTGCACCACAATGGCTTaGGCAGCACTGGCATCGACC +
Preference number: 5 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPCTTMA*AALAST
Trigger: GGTCGATGCCAGTGCTGCCAAAGCCATTGTGGTGCA...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGTGCTGGAAAAGTGAGTaGCGGCGAGTCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRCWKSE*RRVLEM
Trigger: CATCTCCAAGACTCGCCGCAACTCACTTTTCCAGCA...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp GCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGATGCACCAAATATTAAGACTTaGTTTCTCATGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: ATGFSRTMPLPAGLQLDAPNIKT*FLMPCW
Trigger: CCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGG...TGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTAGCAGCCTGGTATTATTaGCACAGGAATCTCCATTAT +
Preference number: 5 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLAAWYY*HRNLHY
Trigger: ATAATGGAGATTCCTGTGCAAATAATACCAGGCTGC...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CAA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCGGTGGCTATGGCCCTTaGTCAGGTCCACGGAGTACT +
Preference number: 5 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPGGYGP*SGPRST
Trigger: AGTACTCCGTGGACCTGACAAAGGGCCATAGCCACC...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp GTAGGGAATGGCACAGAGCCACCAGGTTATCTTGAGTGGGTACATTCGCAGGGCGAGTCAGGATTTCCTTaGCCCTTTGGTGGCTATGGC +
Preference number: 5 (lower is better)
Translates to: VGNGTEPPGYLEWVHSQGESGFP*PFGGYG
Trigger: GCCATAGCCACCAAAGGGCAAAGGAAATCCTGACTC...GCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCTCCAGCTATCCCAACACCACCTCTaGTACATTAATTTGCATCTT +
Preference number: 5 (lower is better)
Translates to: RLATGFSRTMPLPAGLQLSQHHL*YINLHL
Trigger: AAGATGCAAATTAATGTACAAGAGGTGGTGTTGGGA...TAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp CCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCGTCCACCTTACATCCTaGTGCAGAGATAAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: PDIYCLDWLRDSAGPCPSVHLTS*CRDKPE
Trigger: CTCCGGCTTATCTCTGCACAAGGATGTAAGGTGGAC...GGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp AAGCTGCTAGGCAGATTCAAGAAGCAGAAGCCTAGCACACGTTCCCCCAGACCTGACTGCTCGATGAACTaGAGGAGGGCTGACTCGGAA +
Preference number: 5 (lower is better)
Translates to: KLLGRFKKQKPSTRSPRPDCSMN*RRADSE
Trigger: TTCCGAGTCAGCCCTCCTCAAGTTCATCGAGCAGTC...AGGTCTGGGGGAACGTGTGCTAGGCTTCTGCTTCTTGAATCTGCCTAGCAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp ATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGCCAGATTATCCGTCTTaGGGTTCCTTGGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: IYCLDWLRDSAGPCPSLRPDYPS*GSLEAS
Trigger: AGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGG...CCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTTGCTGGAAAAGTGAGTaGCGGCGAGTCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSCWKSE*RRVLEM
Trigger: CATCTCCAAGACTCGCCGCAACTCACTTTTCCAGCA...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp GGGAGGTCCGAGCAAACACGATCTCAGGGTGGTTCTGGAGGATCTGATCAAGCTCAAGCCAGCCCAGGATaGCCCATCTTTCTCATCCAA +
Preference number: 5 (lower is better)
Translates to: GRSEQTRSQGGSGGSDQAQASPG*PIFLIQ
Trigger: TTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTG...AGCTTGATCAGATCCTCCAGAACCACCCTGAGATCGTGTTTGCTCGGACCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGTTTTCCCCTGCATCCTaGCCAACTGGATGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKFSPAS*PTGWRE
Trigger: CTCTCGCCATCCAGTTGGCAAGGATGCAGGGGAAAA...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CAA 90 bp ACTGGCATCGACCTTGCTGATAGGGATCTTAAGCCGGGCAGCGACTTCCTCTGCTCGAATTACCAGAGCTaGCTGAGGCACCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: TGIDLADRDLKPGSDFLCSNYQS*LRHHVL
Trigger: AAGAACATGGTGCCTCAGCAAGCTCTGGTAATTCGA...GCAGAGGAAGTCGCTGCCCGGCTTAAGATCCCTATCAGCAAGGTCGATGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CAA 90 bp TTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGCGGGGCAGGTATCAGAGCTCTaGGTAAATGTTTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: LLSRLATGFSRTMPLPAGQVSEL*VNVFPV
Trigger: GACTGGAAAAACATTTACCAAGAGCTCTGATACCTG...CCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGGCACTGGCATCGACCTaGCTGATAGGGATCTTAAGC +
Preference number: 5 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKALAST*LIGILS
Trigger: GCTTAAGATCCCTATCAGCAAGGTCGATGCCAGTGC...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp GTAGGGAATGGCACAGAGCCACCAGGTTATCTTGAGTGGGTACATTCGCAGGGCCCAGATTATCCGTCTTaGGGTTCCTTGGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: VGNGTEPPGYLEWVHSQGPDYPS*GSLEAS
Trigger: AGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGG...GCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTTGCTGGAAAAGTGAGTaGCGGCGAGTCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPCWKSE*RRVLEM
Trigger: CATCTCCAAGACTCGCCGCAACTCACTTTTCCAGCA...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTAGCCACCAGGTTATCTaGAGTGGGTACATTCGCAGG +
Preference number: 5 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPSHQVI*SGYIRR
Trigger: CCTGCGAATGTACCCACTCAAGATAACCTGGTGGCT...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp CAGCCCACCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCACCCACAAAACAAAGGTaGTCCATGGGGAAATTTATT +
Preference number: 5 (lower is better)
Translates to: QPTSSSAHDSLKPAQDCPPTKQR*SMGKFI
Trigger: AATAAATTTCCCCATGGACAACCTTTGTTTTGTGGG...TGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGACTCCACAACTTTTCGTaGCTCATAGGTCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRLHNFS*LIGPLL
Trigger: CAGCAGTGGACCTATGAGCAACGAAAAGTTGTGGAG...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTGCTGGAAAAGTGAGTaGCGGCGAGTCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPCWKSE*RRVLEM
Trigger: CATCTCCAAGACTCGCCGCAACTCACTTTTCCAGCA...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp AGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCAGCTCTCACAACACCCAGGTCCACGGAGTACTaGGTGCTCAGCTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RCCVKLIISGPIPALTTPRSTEY*VLSSSK
Trigger: CTTGGAAGAGCTGAGCACCAAGTACTCCGTGGACCT...GGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGGTGGGGTAACAGTATaGGGTCCACCTCGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSGGVTV*GPPRVR
Trigger: CCTGACTCGAGGTGGACCCAATACTGTTACCCCACC...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTGAAGCCTCCGAACAGTaGCTTACAGAATTTGACCCA +
Preference number: 5 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPEASEQ*LTEFDP
Trigger: TGGGTCAAATTCTGTAAGCAACTGTTCGGAGGCTTC...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCTTAAAGTCAGCCCGGTaGCAGAGGCCAGCGATTCGG +
Preference number: 5 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVLKSAR*QRPAIR
Trigger: CCGAATCGCTGGCCTCTGCAACCGGGCTGACTTTAA...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCAGCCACCAGGTTATCTaGAGTGGGTACATTCGCAGG +
Preference number: 5 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPSHQVI*SGYIRR
Trigger: CCTGCGAATGTACCCACTCAAGATAACCTGGTGGCT...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp ACCTGTGTTCTGGGGCTAGCAAGAATGCATTATGACCTCAGGTCAGTCCATTTAGGTGATCTACCAACCTaGGCCTCGGAAACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TCVLGLARMHYDLRSVHLGDLPT*ASETAG
Trigger: CCCAGCAGTTTCCGAGGCCAAGGTTGGTAGATCACC...TAAATGGACTGACCTGAGGTCATAATGCATTCTTGCTAGCCCCAGAACACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CAA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCGATTTCCTTTGCCCTTaGGTGGCTATGGCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPDFLCP*VAMALC
Trigger: ACAAAGGGCCATAGCCACCAAAGGGCAAAGGAAATC...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGAAGTTGCTTACAGAATTaGACCCATTCTGGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRSCLQN*THSGVV
Trigger: CACCACTCCAGAATGGGTCAAATTCTGTAAGCAACT...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp GTAGGGAATGGCACAGAGCCACCAGGTTATCTTGAGTGGGTACATTCGCAGGGCCTCTTGTACATTAATTaGCATCTTCTCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: VGNGTEPPGYLEWVHSQGLLYIN*HLLSSS
Trigger: CGAGGAGGAGAGAAGATGCAAATTAATGTACAAGAG...GCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CAA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCCCAGTCAAGGATGAGTaGTCCACCTTACATCCTTGT +
Preference number: 5 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPPVKDE*STLHPC
Trigger: ACAAGGATGTAAGGTGGACAACTCATCCTTGACTGG...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp GGGAGGTCCGAGCAAACACGATCTCAGGGTGGTTCTGGAGGATCTGATCAAGCTCAGGTATCAGAGCTCTaGGTAAATGTTTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: GRSEQTRSQGGSGGSDQAQVSEL*VNVFPV
Trigger: GACTGGAAAAACATTTACCAAGAGCTCTGATACCTG...AGCTTGATCAGATCCTCCAGAACCACCCTGAGATCGTGTTTGCTCGGACCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCCCCGCTAGGTCGCCTTaGTGGGTTCTGTACCTGGTA +
Preference number: 5 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPPARSP*WVLYLV
Trigger: TACCAGGTACAGAACCCACAAAGGCGACCTAGCGGG...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CAA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGCCAAGATTGCGCTATaGCACTCTAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSAKIAL*HSSLGD
Trigger: GTCACCCAGGCTAGAGTGCAATAGCGCAATCTTGGC...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CAA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTTCAGTTCCTCCATATaGCGCTTCTGTTTTTCCCTC +
Preference number: 5 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPFSSSI*RFCFSL
Trigger: GAGGGAAAAACAGAAGCGCAATATGGAGGAACTGAA...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCGATTTCCTTTGCCCTTaGGTGGCTATGGCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSDFLCP*VAMALC
Trigger: ACAAAGGGCCATAGCCACCAAAGGGCAAAGGAAATC...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATTGGTAGGCTCCTCATaGAAATATATCTGGATGCTG +
Preference number: 5 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRLVGSS*KYIWML
Trigger: CAGCATCCAGATATATTTCAATGAGGAGCCTACCAA...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp CTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCCACCTTACATCCTaGTGCAGAGATAAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LKPAQDCPSFSSKIIHPSVHLTS*CRDKPE
Trigger: CTCCGGCTTATCTCTGCACAAGGATGTAAGGTGGAC...ACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp CTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATCATTTCATCGTTCATaGAGTACTCCTGCCCATTCA +
Preference number: 5 (lower is better)
Translates to: LPMIPSSQPRIAHLSHPRSFHRS*STPAHS
Trigger: TGAATGGGCAGGAGTACTCAATGAACGATGAAATGA...TCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCTCATTTCATCGTTCATaGAGTACTCCTGCCCATTCA +
Preference number: 5 (lower is better)
Translates to: SRHLLSRLATGFSRTMPLSFHRS*STPAHS
Trigger: TGAATGGGCAGGAGTACTCAATGAACGATGAAATGA...GAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp CCTCATCCTCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCCCACAAAACAAAGGTaGTCCATGGGGAAATTTATT +
Preference number: 5 (lower is better)
Translates to: PHPLPMIPSSQPRIAHLSPTKQR*SMGKFI
Trigger: AATAAATTTCCCCATGGACAACCTTTGTTTTGTGGG...AGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp CATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTGCACTGGCATCGACCTaGCTGATAGGGATCTTAAGC +
Preference number: 5 (lower is better)
Translates to: HDSLKPAQDCPSFSSKIIALAST*LIGILS
Trigger: GCTTAAGATCCCTATCAGCAAGGTCGATGCCAGTGC...AATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TCTGCCCATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGCCAAATATTAAGACTTaGTTTCTCATGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SAHDSLKPAQDCPSFSSKPNIKT*FLMPCW
Trigger: CCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGG...CTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCAGCCACCAGGTTATCTaGAGTGGGTACATTCGCAGG +
Preference number: 5 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVSHQVI*SGYIRR
Trigger: CCTGCGAATGTACCCACTCAAGATAACCTGGTGGCT...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp AGAGCCTGGATCATCCCAGATTATCCGTCTTTGGGTTCCTTGGAAGCCTCTTCATTCAGTTCCTCCATATaGCGCTTCTGTTTTTCCCTC +
Preference number: 5 (lower is better)
Translates to: RAWIIPDYPSLGSLEASSFSSSI*RFCFSL
Trigger: GAGGGAAAAACAGAAGCGCAATATGGAGGAACTGAA...TGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGGATGATCCAGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS-3UTR CAA 90 bp AGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCTCCCTATGGACATCTGGTACTaGTTGGTAGAATTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: RHLLSRLATGFSRTMPLPMDIWY*LVELKG
Trigger: TCCCTTTAATTCTACCAACAAGTACCAGATGTCCAT...AGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368081.9
CDS-3UTR CAA 90 bp CATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCTCCACAACTTTTCGTaGCTCATAGGTCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: HDSLKPAQDCPSFSSKIILHNFS*LIGPLL
Trigger: CAGCAGTGGACCTATGAGCAACGAAAAGTTGTGGAG...AATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp CATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTTTAAATGGGAATCCCTaGGAGAAGCTGCTAGGCAGA +
Preference number: 5 (lower is better)
Translates to: HDSLKPAQDCPSFSSKIILNGNP*EKLLGR
Trigger: TCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAA...AATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp ACCTGTGTTCTGGGGCTAGCAAGAATGCATTATGACCTCAGGTCAGTCCATTTATTAAATGGGAATCCCTaGGAGAAGCTGCTAGGCAGA +
Preference number: 5 (lower is better)
Translates to: TCVLGLARMHYDLRSVHLLNGNP*EKLLGR
Trigger: TCTGCCTAGCAGCTTCTCCAAGGGATTCCCATTTAA...TAAATGGACTGACCTGAGGTCATAATGCATTCTTGCTAGCCCCAGAACACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS-3UTR CAA 90 bp TTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCCCCCACAAAACAAAGGTaGTCCATGGGGAAATTTATT +
Preference number: 5 (lower is better)
Translates to: FPDIYCLDWLRDSAGPCPPTKQR*SMGKFI
Trigger: AATAAATTTCCCCATGGACAACCTTTGTTTTGTGGG...GGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp TTCATCCTAGTGTCTCAGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCCTCCACAACTTTTCGTaGCTCATAGGTCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: FILVSQMLCQTYNLWPHPLHNFS*LIGPLL
Trigger: CAGCAGTGGACCTATGAGCAACGAAAAGTTGTGGAG...GGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCAGTTGCTTACAGAATTaGACCCATTCTGGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVSCLQN*THSGVV
Trigger: CACCACTCCAGAATGGGTCAAATTCTGTAAGCAACT...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp TTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTCATTTCATCGTTCATaGAGTACTCCTGCCCATTCA +
Preference number: 5 (lower is better)
Translates to: FPQASPGLPIFLIQDNSSSFHRS*STPAHS
Trigger: TGAATGGGCAGGAGTACTCAATGAACGATGAAATGA...GGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp AGATGTTGTGTCAAACTTATAATCTCTGGCCCCATCCCAGCTCTCACAACACCCCCAAATATTAAGACTTaGTTTCTCATGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RCCVKLIISGPIPALTTPPNIKT*FLMPCW
Trigger: CCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGG...GGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000470705.1
ENST00000477338.5
CDS-3UTR CAA 90 bp TTTTCCAGACATTTACTGTCTAGACTGGCTACGGGATTCAGCAGGACCATGCCCTTCTGTACCTGGTACTaGTTGGTAGAATTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: FSRHLLSRLATGFSRTMPFCTWY*LVELKG
Trigger: TCCCTTTAATTCTACCAACAAGTACCAGGTACAGAA...GGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAATGTCTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS TCA 90 bp AAGGTCTATCCCTGGAGTGTATTATTGAGACTTTGCAGGTGTAGCTaGGGCTCAGAATGGTTCCATACTTGTCCAAGGCCACAGAATAAT +
Preference number: 5 (lower is better)
Translates to: KVYPWSVLLRLCRCS*GSEWFHTCPRPQNN
Trigger: ATTATTCTGTGGCCTTGGACAAGTATGGAACCATTCTGAGCCTCAGCTACACCTGCAAAGTCTCAATAATACACTCCAGGGATAGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418334.5
CDS-3UTR CAA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCCTCTTGTACATTAATTaGCATCTTCTCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVLLYIN*HLLSSS
Trigger: CGAGGAGGAGAGAAGATGCAAATTAATGTACAAGAG...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp CATGATTCCCTCAAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTTCCCAACACCACCTCTaGTACATTAATTTGCATCTT +
Preference number: 5 (lower is better)
Translates to: HDSLKPAQDCPSFSSKIISQHHL*YINLHL
Trigger: AAGATGCAAATTAATGTACAAGAGGTGGTGTTGGGA...AATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS-3UTR CAA 90 bp AAGCCAGCCCAGGATTGCCCATCTTTCTCATCCAAGATAATTCATCCTAGTGTCTTCTGTACCTGGTACTaGTTGGTAGAATTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: KPAQDCPSFSSKIIHPSVFCTWY*LVELKG
Trigger: TCCCTTTAATTCTACCAACAAGTACCAGGTACAGAA...GACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469023.5
ENST00000477338.5
CDS-3UTR CAA 90 bp ACCTGTGTTCTGGGGCTAGCAAGAATGCATTATGACCTCAGGTCAGTCCATTTAAGAGAAATGTGGGTTTaGCATTTCCTCTTGATCTCT +
Preference number: 5 (lower is better)
Translates to: TCVLGLARMHYDLRSVHLREMWV*HFLLIS
Trigger: AGAGATCAAGAGGAAATGCAAAACCCACATTTCTCT...TAAATGGACTGACCTGAGGTCATAATGCATTCTTGCTAGCCCCAGAACACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS TCA 72 bp CTCAGCAGCGATAGGTGTCTGGCCAACCGCCAGGCCTaGCGTCAGGGAGGCAATTCTGCCCATCACTGTGGA +
Preference number: 6 (lower is better)
Translates to: LSSDRCLANRQA*RQGGNSAHHCG
Trigger: TCCACAGTGATGGGCAGAATTGCCTCCCTGACGTCAGGCCTGGCGGTTGGCCAGACACCTATCGCTGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS CCA 72 bp CTCTCCGGAGCACCCTTCATCATCAGTACGTGGGTCTaGGAGCTGTCCTCCCGAAGGTGGATGGACATCTGG +
Preference number: 6 (lower is better)
Translates to: LSGAPFIISTWV*ELSSRRWMDIW
Trigger: CCAGATGTCCATCCACCTTCGGGAGGACAGCTCCCAGACCCACGTACTGATGATGAAGGGTGCTCCGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368081.9
CDS CCA 72 bp CTCTCCGGAGCACCCTTCATCATCAGTACGTGGGTCTaGGAGCTGTCCTCCCGAAGGTGGATGGACATCTTT +
Preference number: 6 (lower is better)
Translates to: LSGAPFIISTWV*ELSSRRWMDIF
Trigger: AAAGATGTCCATCCACCTTCGGGAGGACAGCTCCCAGACCCACGTACTGATGATGAAGGGTGCTCCGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477338.5
CDS TCA 72 bp CCTGTTGTGGCCCTCTTAGCAATGGGCAGGATCTCCTaGTTAGCCTTAAAGTCAGCCCGGTTGCAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: PVVALLAMGRIS*LALKSARLQRP
Trigger: TGGCCTCTGCAACCGGGCTGACTTTAAGGCTAATCAGGAGATCCTGCCCATTGCTAAGAGGGCCACAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS CCA 72 bp TTGGGTCCACCTCGAGTCAGGATTTCCTTTGCCCTTTaGTGGCTATGGCCCTTTGTCAGGTCCACGGAGTAC +
Preference number: 6 (lower is better)
Translates to: LGPPRVRISFAL*WLWPFVRSTEY
Trigger: GTACTCCGTGGACCTGACAAAGGGCCATAGCCACCAAAGGGCAAAGGAAATCCTGACTCGAGGTGGACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS TCA 72 bp AGAGCTGTAAGACTGCTCGATGAACTTGAGGAGGGCTaGCTCGGAAGCATCACCTGTTGTGGCCCTCTTAGC +
Preference number: 6 (lower is better)
Translates to: RAVRLLDELEEG*LGSITCCGPLS
Trigger: GCTAAGAGGGCCACAACAGGTGATGCTTCCGAGTCAGCCCTCCTCAAGTTCATCGAGCAGTCTTACAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368081.9
ENST00000469023.5
ENST00000477338.5
CDS CAA 72 bp ATTGGGTCCACCTCGAGTCAGGATTTCCTTTGCCCTTaGGTGGCTATGGCCCTTTGTCAGGTCCACGGAGTA +
Preference number: 6 (lower is better)
Translates to: IGSTSSQDFLCP*VAMALCQVHGV
Trigger: TACTCCGTGGACCTGACAAAGGGCCATAGCCACCAAAGGGCAAAGGAAATCCTGACTCGAGGTGGACCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS GCA 72 bp AACAGTATTGGGTCCACCTCGAGTCAGGATTTCCTTTaGCCTTTGGTGGCTATGGCCCTTTGTCAGGTCCAC +
Preference number: 6 (lower is better)
Translates to: NSIGSTSSQDFL*PLVAMALCQVH
Trigger: GTGGACCTGACAAAGGGCCATAGCCACCAAAGGGCAAAGGAAATCCTGACTCGAGGTGGACCCAATACTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS GCA 72 bp CCAGTCCATAGTAGGAGGGAGAAGCCTCCGAACAGTTaGTTACAGAATTTGACCCATTCTGGAGTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: PVHSRREKPPNS*LQNLTHSGVVG
Trigger: CCCCACCACTCCAGAATGGGTCAAATTCTGTAAGCAACTGTTCGGAGGCTTCTCCCTCCTACTATGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS GCA 72 bp GGCTATGGCCCTTTGTCAGGTCCACGGAGTACTTGGTaGTCAGCTCTTCCAAGGTTAATTTGTGATCATCCA +
Preference number: 6 (lower is better)
Translates to: GYGPLSGPRSTW*SALPRLICDHP
Trigger: TGGATGATCACAAATTAACCTTGGAAGAGCTGAGCACCAAGTACTCCGTGGACCTGACAAAGGGCCATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368081.9
ENST00000477338.5
CDS TCA 72 bp CAACACTCTGCAAGGTCTATCCCTGGAGTGTATTATTaGGACTTTGCAGGTGTAGCTGAGGCTCAGAATGGT +
Preference number: 6 (lower is better)
Translates to: QHSARSIPGVYY*DFAGVAEAQNG
Trigger: ACCATTCTGAGCCTCAGCTACACCTGCAAAGTCTCAATAATACACTCCAGGGATAGACCTTGCAGAGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418334.5
CDS TCA 72 bp GCAAGGAGAGAGAAATGTGGGTTTTGCATTTCCTCTTaGTCTCTGATGTATGAAAAGGAGCTCTCCATGGGG +
Preference number: 6 (lower is better)
Translates to: ARREKCGFCISS*SLMYEKELSMG
Trigger: CCCCATGGAGAGCTCCTTTTCATACATCAGAGATCAAGAGGAAATGCAAAACCCACATTTCTCTCTCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469023.5
CDS GCA 72 bp GGCATCTACCATGACCTAAGCATGCTTGGTGCTTTATaGCCATTTCTACGTGTAAATCTCACAACACTCTGC +
Preference number: 6 (lower is better)
Translates to: GIYHDLSMLGAL*PFLRVNLTTLC
Trigger: GCAGAGTGTTGTGAGATTTACACGTAGAAATGGGCATAAAGCACCAAGCATGCTTAGGTCATGGTAGATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418334.5
CDS CAA 90 bp GTCCAAGGCCACAGAATAATACATAGTAGAGTTGAGATTTCCACCTaGGATTGTGAGTGTCTAAGGCCAGTGCCAATGTCTCCTATTAAA +
Preference number: 6 (lower is better)
Translates to: VQGHRIIHSRVEIST*DCECLRPVPMSPIK
Trigger: TTTAATAGGAGACATTGGCACTGGCCTTAGACACTCACAATCCAAGGTGGAAATCTCAACTCTACTATGTATTATTCTGTGGCCTTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418334.5
CDS CAA 72 bp CACAGAATAATACATAGTAGAGTTGAGATTTCCACCTaGGATTGTGAGTGTCTAAGGCCAGTGCCAATGTCT +
Preference number: 6 (lower is better)
Translates to: HRIIHSRVEIST*DCECLRPVPMS
Trigger: AGACATTGGCACTGGCCTTAGACACTCACAATCCAAGGTGGAAATCTCAACTCTACTATGTATTATTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418334.5