Pregenerated sensors for ATP1A3 (Homo sapiens)
Ensembl gene IDs: ENSG00000105409Ensembl transcript IDs: ENST00000441343.5, ENST00000465007.1, ENST00000468774.3, ENST00000473086.3, ENST00000485672.2, ENST00000543770.5, ENST00000545399.6, ENST00000602133.5, ENST00000636197.1, ENST00000636258.1, ENST00000636282.1, ENST00000645448.1, ENST00000648268.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTGAGGTGGGATGGAGTAATGTCACCTCCCAGACTCCCTCTGCCTaGGGGTCACTGGGCCCGGCCCCCAGCCCATACACTAACACCCCC | + |
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Preference number: 5 (lower is better) Translates to: AEVGWSNVTSQTPSA*GSLGPAPSPYTNTP Trigger: GGGGGTGTTAGTGTATGGGCTGGGGGCCGGGCCCAGTGACCCCCAGGCAGAGGGAGTCTGGGAGGTGACATTACTCCATCCCACCTCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645448.1 |
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| CDS GCA 90 bp | AGAGGCAAGGACACAGCCAGGCATGCACGCTCCCCACTACACAGTTaGACACGCACACCCTCAGCTGTGCACTCAGTCTCCCCACCGTGG | + |
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Preference number: 5 (lower is better) Translates to: RGKDTARHARSPLHS*TRTPSAVHSVSPPW Trigger: CCACGGTGGGGAGACTGAGTGCACAGCTGAGGGTGTGCGTGTGCAACTGTGTAGTGGGGAGCGTGCATGCCTGGCTGTGTCCTTGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468774.3 |
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| CDS GCA 90 bp | ATGCACGCTCCCCACTACACAGTTGCACACGCACACCCTCAGCTGTaGACTCAGTCTCCCCACCGTGGCTCTCCTGTTCCTCTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: MHAPHYTVAHAHPQL*TQSPHRGSPVPLLL Trigger: GAGGAGGAGAGGAACAGGAGAGCCACGGTGGGGAGACTGAGTGCACAGCTGAGGGTGTGCGTGTGCAACTGTGTAGTGGGGAGCGTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468774.3 |
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| CDS TCA 90 bp | GAGGTCATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCCCCATCTTGGCGGCTCCGCG | + |
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Preference number: 5 (lower is better) Translates to: EVIQVPALLALVLLG*VLVIFLVPHLGGSA Trigger: CGCGGAGCCGCCAAGATGGGGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATGACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000441343.5 ENST00000648268.1 |
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| CDS CCA 90 bp | CACAGACAGAGACCCGTGAGAAGACAGAGTGGGTGCCCGGAGAGATaGGAAGAGAGAGAAGAGTGGGAACCAGGTGGCAGAGCCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: HRQRPVRRQSGCPER*EEREEWEPGGRAIQ Trigger: CTGGATGGCTCTGCCACCTGGTTCCCACTCTTCTCTCTCTTCCCATCTCTCCGGGCACCCACTCTGTCTTCTCACGGGTCTCTGTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441343.5 |
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| CDS TCA 90 bp | GAGGTCATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCTCCATCCCTGGGCCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: EVIQVPALLALVLLG*VLVIFLVLHPWAHQ Trigger: CTGATGGGCCCAGGGATGGAGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATGACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636282.1 |
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| CDS TCA 90 bp | GAGGTCATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCAGGGAGGAATCCAGGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: EVIQVPALLALVLLG*VLVIFLVREESRAA Trigger: TGCAGCCCTGGATTCCTCCCTGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468774.3 |
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| CDS TCA 90 bp | GAGGTCATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCGTGGCTCTCCTGTTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: EVIQVPALLALVLLG*VLVIFLVRGSPVPL Trigger: GAGAGGAACAGGAGAGCCACGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543770.5 |
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| CDS TCA 90 bp | GAGGTCATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCCAATGTCACCGGCCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: EVIQVPALLALVLLG*VLVIFLVPMSPAPQ Trigger: TTGTGGGGCCGGTGACATTGGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602133.5 |
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| CDS GCA 90 bp | ACAAGGAAACCACACAGACAGAGACCCGTGAGAAGACAGAGTGGGTaGCCGGAGAGATGGGAAGAGAGAGAAGAGTGGGAACCAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: TRKPHRQRPVRRQSG*PERWEEREEWEPGG Trigger: GCCACCTGGTTCCCACTCTTCTCTCTCTTCCCATCTCTCCGGGCACCCACTCTGTCTTCTCACGGGTCTCTGTCTGTGTGGTTTCCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441343.5 |
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| CDS TCA 90 bp | GAGGTCATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCTGCGAGGTGGCGATACGATA | + |
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Preference number: 5 (lower is better) Translates to: EVIQVPALLALVLLG*VLVIFLVLRGGDTI Trigger: TATCGTATCGCCACCTCGCAGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545399.6 |
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| CDS CCA 90 bp | AGAGACAAGGAAACCACACAGACAGAGACCCGTGAGAAGACAGAGTaGGTGCCCGGAGAGATGGGAAGAGAGAGAAGAGTGGGAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: RDKETTQTETREKTE*VPGEMGRERRVGTR Trigger: CCTGGTTCCCACTCTTCTCTCTCTTCCCATCTCTCCGGGCACCCACTCTGTCTTCTCACGGGTCTCTGTCTGTGTGGTTTCCTTGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441343.5 |
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| CDS TCA 90 bp | GAGGTCATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCTGACAGCCATCACTGACTAC | + |
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Preference number: 5 (lower is better) Translates to: EVIQVPALLALVLLG*VLVIFLVLTAITDY Trigger: GTAGTCAGTGATGGCTGTCAGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636258.1 |
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| CDS TCA 90 bp | GAGGTCATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCATGCAACTGTGCACATGCAAC | + |
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Preference number: 5 (lower is better) Translates to: EVIQVPALLALVLLG*VLVIFLVMQLCTCN Trigger: GTTGCATGTGCACAGTTGCATGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636197.1 |
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| CDS TCA 72 bp | GTGCACATGCAACCGCACAAGGTCAGGCGGAGATGCTaGGGGCTGGCCCACAACCTCGCGGATCTCCGCACA | + |
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Preference number: 6 (lower is better) Translates to: VHMQPHKVRRRC*GLAHNLADLRT Trigger: TGTGCGGAGATCCGCGAGGTTGTGGGCCAGCCCTCAGCATCTCCGCCTGACCTTGTGCGGTTGCATGTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636197.1 |
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| CDS GCA 72 bp | GATCAGGGGCCGCCCAAGCCACTCTCCACCAGTCCCTaGTCGCCTGGAGTCTGGGAAGGGAGCTTTGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: DQGPPKPLSTSP*SPGVWEGSFVS Trigger: TGACACAAAGCTCCCTTCCCAGACTCCAGGCGAGCAGGGACTGGTGGAGAGTGGCTTGGGCGGCCCCTGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645448.1 |
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| CDS CAA 90 bp | CAGAGGCAAGGACACAGCCAGGCATGCACGCTCCCCACTACACAGTaGCACACGCACACCCTCAGCTGTGCACTCAGTCTCCCCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: QRQGHSQACTLPTTQ*HTHTLSCALSLPTV Trigger: CACGGTGGGGAGACTGAGTGCACAGCTGAGGGTGTGCGTGTGCAACTGTGTAGTGGGGAGCGTGCATGCCTGGCTGTGTCCTTGCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468774.3 |
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| CDS GCA 72 bp | GACACAGCCAGGCATGCACGCTCCCCACTACACAGTTaGACACGCACACCCTCAGCTGTGCACTCAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: DTARHARSPLHS*TRTPSAVHSVS Trigger: GGAGACTGAGTGCACAGCTGAGGGTGTGCGTGTGCAACTGTGTAGTGGGGAGCGTGCATGCCTGGCTGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468774.3 |
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| CDS CAA 90 bp | CGTTCACGCATCAGCTTCACGGAGCCAGAGGACAGCTCGATGCACTaGAGCAGGGCAGACTCAGACGCATCCCCAGCCACATCCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RSRISFTEPEDSSMH*SRADSDASPATSLL Trigger: CAAGAGGGATGTGGCTGGGGATGCGTCTGAGTCTGCCCTGCTCAAGTGCATCGAGCTGTCCTCTGGCTCCGTGAAGCTGATGCGTGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441343.5 ENST00000543770.5 ENST00000545399.6 ENST00000602133.5 ENST00000648268.1 |
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| CDS TCA 72 bp | CCCTTGAAGACAGCGCGATTGCAGAGCCCAGCGATGTaGGACAGGGCCACCCAGGTGTGCGAACTCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PLKTARLQSPAM*DRATQVCELLS Trigger: TGACAAGAGTTCGCACACCTGGGTGGCCCTGTCTCACATCGCTGGGCTCTGCAATCGCGCTGTCTTCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441343.5 ENST00000543770.5 ENST00000545399.6 ENST00000602133.5 ENST00000648268.1 |
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| CDS CAA 72 bp | ATCAGCTTCACGGAGCCAGAGGACAGCTCGATGCACTaGAGCAGGGCAGACTCAGACGCATCCCCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: ISFTEPEDSSMH*SRADSDASPAT Trigger: TGTGGCTGGGGATGCGTCTGAGTCTGCCCTGCTCAAGTGCATCGAGCTGTCCTCTGGCTCCGTGAAGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441343.5 ENST00000543770.5 ENST00000545399.6 ENST00000602133.5 ENST00000648268.1 |
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| CDS TCA 72 bp | CCAGCCACATCCCTCTTGAGCACAGGGATGTTGTCCTaGCCACCCTTGAAGACAGCGCGATTGCAGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PATSLLSTGMLS*PPLKTARLQSP Trigger: TGGGCTCTGCAATCGCGCTGTCTTCAAGGGTGGTCAGGACAACATCCCTGTGCTCAAGAGGGATGTGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441343.5 ENST00000543770.5 ENST00000545399.6 ENST00000602133.5 ENST00000648268.1 |
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| CDS TCA 72 bp | CAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCTGCGAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QVPALLALVLLG*VLVIFLVLRGG Trigger: GCCACCTCGCAGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545399.6 |
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| CDS TCA 72 bp | CAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCCCCATCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: QVPALLALVLLG*VLVIFLVPHLG Trigger: GCCAAGATGGGGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000441343.5 ENST00000648268.1 |
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| CDS TCA 72 bp | CAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCGTGGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QVPALLALVLLG*VLVIFLVRGSP Trigger: AGGAGAGCCACGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543770.5 |
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| CDS TCA 72 bp | CAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCTCCATCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QVPALLALVLLG*VLVIFLVLHPW Trigger: CCAGGGATGGAGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636282.1 |
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| CDS CCA 72 bp | CATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTaGGTGAGTCCTTGTCATCTTTCTTGTCCTGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: HPGPGAPCPCSS*VSPCHLSCPAR Trigger: CCTCGCAGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545399.6 |
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| CDS CCA 72 bp | CATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTaGGTGAGTCCTTGTCATCTTTCTTGTCCGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: HPGPGAPCPCSS*VSPCHLSCPWL Trigger: GAGCCACGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543770.5 |
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| CDS CAA 72 bp | GACGATCTCGGTGTGATTCTGCAGGATCTCGTCGATTaGCTCGGAGGTGAAGTCCTTGAGGTCGGTGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: DDLGVILQDLVD*LGGEVLEVGAV Trigger: CACGGCACCGACCTCAAGGACTTCACCTCCGAGCAAATCGACGAGATCCTGCAGAATCACACCGAGATCGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441343.5 ENST00000543770.5 ENST00000545399.6 ENST00000602133.5 ENST00000648268.1 |
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| CDS TCA 72 bp | CAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCAGGGAGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: QVPALLALVLLG*VLVIFLVREES Trigger: GGATTCCTCCCTGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468774.3 |
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| CDS TCA 72 bp | CAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCCAATGTCACCG | + |
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Preference number: 6 (lower is better) Translates to: QVPALLALVLLG*VLVIFLVPMSP Trigger: CGGTGACATTGGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602133.5 |
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| CDS TCA 72 bp | CAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCCTGACAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: QVPALLALVLLG*VLVIFLVLTAI Trigger: GATGGCTGTCAGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636258.1 |
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| CDS CCA 72 bp | CATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTaGGTGAGTCCTTGTCATCTTTCTTGTCCCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: HPGPGAPCPCSS*VSPCHLSCPPS Trigger: AGATGGGGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000441343.5 ENST00000648268.1 |
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| CDS CCA 72 bp | CATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTaGGTGAGTCCTTGTCATCTTTCTTGTCAGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: HPGPGAPCPCSS*VSPCHLSCQGG Trigger: TCCTCCCTGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468774.3 |
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| CDS CCA 72 bp | TGGGTGAGTCCTTGTCATCTTTCTTGTCCTGCGAGGTaGCGATACGATAGCTGTCAGAGCCACCAGACCCCA | + |
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Preference number: 6 (lower is better) Translates to: WVSPCHLSCPAR*RYDSCQSHQTP Trigger: TGGGGTCTGGTGGCTCTGACAGCTATCGTATCGCCACCTCGCAGGACAAGAAAGATGACAAGGACTCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545399.6 |
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| CDS CCA 72 bp | CATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTaGGTGAGTCCTTGTCATCTTTCTTGTCCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: HPGPGAPCPCSS*VSPCHLSCPPS Trigger: GGATGGAGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636282.1 |
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| CDS CCA 72 bp | CATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTaGGTGAGTCCTTGTCATCTTTCTTGTCCTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: HPGPGAPCPCSS*VSPCHLSCPDS Trigger: GCTGTCAGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636258.1 |
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| CDS CAA 72 bp | ACCTCCTTCTTGAGGTCATCCAGGTCCCGGCGCTCCTaGCCCTTGTTCTTCTTGGGTGAGTCCTTGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: TSFLRSSRSRRS*PLFFLGESLSS Trigger: AGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATGACCTCAAGAAGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000441343.5 ENST00000465007.1 ENST00000468774.3 ENST00000473086.3 ENST00000543770.5 ENST00000545399.6 ENST00000602133.5 ENST00000636197.1 ENST00000648268.1 |
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| CDS TCA 72 bp | CAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTGGGTaGGTCCTTGTCATCTTTCTTGTCATGCAACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: QVPALLALVLLG*VLVIFLVMQLC Trigger: GCACAGTTGCATGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636197.1 |
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| CDS GCA 72 bp | GTCCTTGTCATCTTTCTTGTCATGCAACTGTGCACATaGAACCGCACAAGGTCAGGCGGAGATGCTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VLVIFLVMQLCT*NRTRSGGDAEG Trigger: GCCCTCAGCATCTCCGCCTGACCTTGTGCGGTTGCATGTGCACAGTTGCATGACAAGAAAGATGACAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636197.1 |
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| CDS CCA 72 bp | CATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTaGGTGAGTCCTTGTCATCTTTCTTGTCCCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: HPGPGAPCPCSS*VSPCHLSCPNV Trigger: GACATTGGGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602133.5 |
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| CDS CCA 72 bp | GAGACAAAGAAGGAAAGAAAGAGACAGAGTAAGAGATaGAGAGAGACAGGCAAGGCGAGCCGCCCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ETKKERKRQSKR*RETGKASRPAE Trigger: CTCTGCTGGGCGGCTCGCCTTGCCTGTCTCTCTCCATCTCTTACTCTGTCTCTTTCTTTCCTTCTTTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441343.5 |
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| CDS CCA 72 bp | CATCCAGGTCCCGGCGCTCCTTGCCCTTGTTCTTCTTaGGTGAGTCCTTGTCATCTTTCTTGTCATGCAACT | + |
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Preference number: 6 (lower is better) Translates to: HPGPGAPCPCSS*VSPCHLSCHAT Trigger: AGTTGCATGACAAGAAAGATGACAAGGACTCACCCAAGAAGAACAAGGGCAAGGAGCGCCGGGACCTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636197.1 |
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| CDS TCA 72 bp | GGGTCTGTATTTGTGTGTCTGACCCTAGGTTGGTTATaGGGGTTGGTGTGTCTGAGTCTCCCCTGTTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: GSVFVCLTLGWL*GLVCLSLPCLC Trigger: GCACAAACAGGGGAGACTCAGACACACCAACCCTCATAACCAACCTAGGGTCAGACACACAAATACAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645448.1 |
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| CDS TCA 72 bp | ACAGTCTGTGTTGTATTTCCGGCAGACCTCTTCCACTaGCATCTTGTGCTCTGTCATAGCCACCTCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TVCVVFPADLFH*HLVLCHSHLLL Trigger: AAGAAGGAGGTGGCTATGACAGAGCACAAGATGTCAGTGGAAGAGGTCTGCCGGAAATACAACACAGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000441343.5 ENST00000465007.1 ENST00000468774.3 ENST00000473086.3 ENST00000543770.5 ENST00000545399.6 ENST00000602133.5 ENST00000648268.1 |
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| CDS CAA 72 bp | CATCATGAGCGTGCACTTCTTAATTTTGCAATAGGATaGTTGGCTCTTTACGGCTTGCCAGTGTTTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: HHERALLNFAIG*LALYGLPVFLK Trigger: CTTGAGAAACACTGGCAAGCCGTAAAGAGCCAACAATCCTATTGCAAAATTAAGAAGTGCACGCTCATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485672.2 |
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| CDS TCA 72 bp | CTTTCTTTGATTGTTTGCTTTGTTAATGAGGCCCTCTaGGTCAGGCCCAAGTTGTCTTTCACAAGAATACTG | + |
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Preference number: 6 (lower is better) Translates to: LSLIVCFVNEAL*VRPKLSFTRIL Trigger: CAGTATTCTTGTGAAAGACAACTTGGGCCTGACTCAGAGGGCCTCATTAACAAAGCAAACAATCAAAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485672.2 |
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