RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP1A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000018625

Ensembl transcript IDs: ENST00000361216.8, ENST00000392233.7, ENST00000447527.1, ENST00000468587.1, ENST00000472488.5, ENST00000478587.1

Found 494 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTaGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCTGCTGCTACCCT +
Preference number: 1 (lower is better)
Translates to: PRVSGELCGTQVWHF*KLLIAFWSCLCCYP
Trigger: AGGGTAGCAGCAGAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CCA 90 bp GAGACAGGAAGGTTCAGGGAACTTCTCCACCCTGATTCTAGCCAATaGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGG +
Preference number: 1 (lower is better)
Translates to: ETGRFRELLHPDSSQ*PANSFSRVGLAVSG
Trigger: CCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGCTAGAATCAGGGTGGAGAAGTTCCCTGAACCTTCCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR TCA 90 bp GCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTaGTTGCCTTCTGGTCCTGCCTCTGCTGCTACCCTGATGAGATCT +
Preference number: 1 (lower is better)
Translates to: AGNSVAHKCGISGSS*LPSGPASAATLMRS
Trigger: AGATCTCATCAGGGTAGCAGCAGAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR TCA 90 bp AGGAAGCTAACGGGGGTGGAAGTGGGAAATGGAGTGAGGCTGGGGTaGTCTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTT +
Preference number: 1 (lower is better)
Translates to: RKLTGVEVGNGVRLG*SERASFWFRWVPAF
Trigger: AAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAGATCACCCCAGCCTCACTCCATTTCCCACTTCCACCCCCGTTAGCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR GCA 90 bp CCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATaGCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACA +
Preference number: 1 (lower is better)
Translates to: PAELPHYLSPNVATQ*HPLFPSLSITIPTT
Trigger: TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
3UTR CCA 90 bp AGTCCACGACATCTATCTGGAGACTCATGTCAAATGTCCTGTCATTaGCACTACCTCACTTCCTTTGTTGTTTCCTTCCTCCAGCCAGCC +
Preference number: 1 (lower is better)
Translates to: SPRHLSGDSCQMSCH*HYLTSFVVSFLQPA
Trigger: GGCTGGCTGGAGGAAGGAAACAACAAAGGAAGTGAGGTAGTGCCAATGACAGGACATTTGACATGAGTCTCCAGATAGATGTCGTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR GCA 90 bp CTGTCTGCCTTAGGTCTTCCATTTTCCTCAGATGTCTTTCTCACTTaGATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCC +
Preference number: 1 (lower is better)
Translates to: LSALGLPFSSDVFLT*MTYLGLSLQDIPSA
Trigger: GGCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAGACATCTGAGGAAAATGGAAGACCTAAGGCAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CCA 90 bp CTGATGAGATCTGAGTTTGTTCTGCTGGTGGGGTATTCTAAAATGTaGGACGTAGAGCTGGAGTCCACGACATCTATCTGGAGACTCATG +
Preference number: 1 (lower is better)
Translates to: LMRSEFVLLVGYSKM*DVELESTTSIWRLM
Trigger: CATGAGTCTCCAGATAGATGTCGTGGACTCCAGCTCTACGTCCCACATTTTAGAATACCCCACCAGCAGAACAAACTCAGATCTCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CCA 90 bp TATTCTAAAATGTGGGACGTAGAGCTGGAGTCCACGACATCTATCTaGAGACTCATGTCAAATGTCCTGTCATTGGCACTACCTCACTTC +
Preference number: 1 (lower is better)
Translates to: YSKMWDVELESTTSI*RLMSNVLSLALPHF
Trigger: GAAGTGAGGTAGTGCCAATGACAGGACATTTGACATGAGTCTCCAGATAGATGTCGTGGACTCCAGCTCTACGTCCCACATTTTAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CCA 90 bp GATAAAGCAAAATTCCAGTGCAATGAAATGACAGCCTTTGGGAGGTaGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTGCTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: DKAKFQCNEMTAFGR*FMGLTQCLSFVLPS
Trigger: GGAAGGAAGCACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATTTCATTGCACTGGAATTTTGCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 90 bp TCCACCCTGATTCTAGCCAATGGCCAGCGAACTCCTTTTCCAGGGTaGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGG +
Preference number: 2 (lower is better)
Translates to: STLILANGQRTPFPG*AWQCRGMMQVHRDG
Trigger: CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGCTAGAATCAGGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp GTGGGCACAATGATCGTCGGTTTGAAGGGCATTTGCCTGGAGGGAACAGCCCTGGACATCCGGACCTTGTaGACTAAGAGGACCCCTAAC +
Preference number: 2 (lower is better)
Translates to: VGTMIVGLKGICLEGTALDIRTL*TKRTPN
Trigger: GTTAGGGGTCCTCTTAGTCCACAAGGTCCGGATGTC...CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCGACGATCATTGTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 90 bp AGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTaGATTGCCTTCTGGTCCTGCCTCTGCTGCTACCCTGATGAGATC +
Preference number: 2 (lower is better)
Translates to: SGELCGTQVWHFWKL*IAFWSCLCCYPDEI
Trigger: GATCTCATCAGGGTAGCAGCAGAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR TCA 90 bp ACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTATTTCTGGAAGCTCTTaGTTGCCTTCTGGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: TKRTPNQGSAGNSVAHKCISGSS*LPSGPA
Trigger: GGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAAT...ACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR GCA 90 bp CGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAATCTCTCCCCAAATGTTaGCACCCAATGCCACCCGTT +
Preference number: 2 (lower is better)
Translates to: RLGDKSTFSSLRLLHSPESLPKC*HPMPPV
Trigger: AACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA...TTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp CTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAACATAGTGGAGTGGGATaGAAAAGGATCTGGTCGGGG +
Preference number: 2 (lower is better)
Translates to: LTKGQRGTLWHTSVAFLEHSGVG*KRIWSG
Trigger: CCCCGACCAGATCCTTTTCCATCCCACTCCACTATG...TTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp GGACCTTGTGGACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGTCCTTCTGGTTTAGATaGGTTCCTGCTTTTGGATGC +
Preference number: 2 (lower is better)
Translates to: GPCGLRGPLTKGQRGTLWSFWFR*VPAFGC
Trigger: GCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGA...CCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGTCCACAAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGCTGGGAAAGAACTTGTaGCCATCCCTTTCAGAACAG +
Preference number: 2 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGLGKNL*PSLSEQ
Trigger: CTGTTCTGAAAGGGATGGCCACAAGTTCTTTCCCAG...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATCCCTTTCGCCCAGGCTaGAGTGTAATGGCACGATCT +
Preference number: 2 (lower is better)
Translates to: GICLEGTALPPKTSKANHPFRPG*SVMARS
Trigger: AGATCGTGCCATTACACTCCAGCCTGGGCGAAAGGG...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 90 bp CCGCAACTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTaGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCA +
Preference number: 2 (lower is better)
Translates to: PQLSLLSCLIISPQM*PPNATRYFHPSPSP
Trigger: TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAGTTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
3UTR CAA 90 bp CAGCCTCGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTaGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGG +
Preference number: 2 (lower is better)
Translates to: QPRLGDKSTFSSLRL*HSPEEPFVIARSEG
Trigger: CCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCGAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR TCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCGAGGCTGGGGTGATCTaGGAGGGCTTCCTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCEAGVI*EGFLLV
Trigger: AACCAGAAGGAAGCCCTCTCAGATCACCCCAGCCTC...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR TCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCAAGTGGGAAATGGAGTaGGGCTGGGGTGATCTGAGA +
Preference number: 2 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFKWEME*GWGDLR
Trigger: TCTCAGATCACCCCAGCCTCACTCCATTTCCCACTT...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR TCA 90 bp ACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTCAGAAGAACCTTTTGTaGTTGCAAGGTCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: TKRTPNQGSAGNSVAHKCQKNLL*LQGLKG
Trigger: CCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTG...ACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR GCA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAACCAGGGATAGAGTCCTaGAGGAAGCTAACGGGGGTG +
Preference number: 2 (lower is better)
Translates to: RLLHSPEEPFVIARSEGEPGIES*RKLTGV
Trigger: CACCCCCGTTAGCTTCCTGCAGGACTCTATCCCTGG...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp GGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCCTTACCAGCCTCGACTaGGAGACAAGTCCACCTTTT +
Preference number: 2 (lower is better)
Translates to: GTQVWHFWKLLIAFWSCLLTSLD*ETSPPF
Trigger: AAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAAG...GAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR GCA 90 bp CGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAAAATGTTGCCACCCAATaGCACCCGTTATTTCCATCC +
Preference number: 2 (lower is better)
Translates to: RLGDKSTFSSLRLLHSPENVATQ*HPLFPS
Trigger: GGATGGAAATAACGGGTGGCATTGGGTGGCAACATT...TTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp TCCCAGGCCCAAGGCAATGACTCCCTTACTTCCTTGCTTCTGATAAAGCAAAATGCCAGGCTTAGAGAATaGGCAAGGCTGCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: SQAQGNDSLTSLLLIKQNARLRE*ARLPAE
Trigger: CTCTGCAGGCAGCCTTGCCCATTCTCTAAGCCTGGC...ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR TCA 90 bp ACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTCCTGCTTTTGGATGCTaGTCTATTACAGTAGGAAGT +
Preference number: 2 (lower is better)
Translates to: TKRTPNQGSAGNSVAHKCPAFGC*SITVGS
Trigger: ACTTCCTACTGTAATAGATCAGCATCCAAAAGCAGG...ACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR GCA 90 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCAATGTTGCCACCCAATaGCACCCGTTATTTCCATCC +
Preference number: 2 (lower is better)
Translates to: LCGTQVWHFWKLLIAFWSNVATQ*HPLFPS
Trigger: GGATGGAAATAACGGGTGGCATTGGGTGGCAACATT...GGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp TTACCAGCCTCGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCATCCTTCTGGTTTAGATaGGTTCCTGCTTTTGGATGC +
Preference number: 2 (lower is better)
Translates to: LPASTGRQVHLFQSQALASFWFR*VPAFGC
Trigger: GCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGA...TGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATGGGTATTCTAAAATGTaGGACGTAGAGCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: GICLEGTALPPKTSKANHGYSKM*DVELES
Trigger: GGACTCCAGCTCTACGTCCCACATTTTAGAATACCC...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp ACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTAGTTTGTTCTGCTGGTaGGGTATTCTAAAATGTGGG +
Preference number: 2 (lower is better)
Translates to: TKRTPNQGSAGNSVAHKCSLFCW*GILKCG
Trigger: CCCACATTTTAGAATACCCCACCAGCAGAACAAACT...ACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 90 bp GAGTCCACGACATCTATCTGGAGACTCATGTCAAATGTCCTGTCATaGGCACTACCTCACTTCCTTTGTTGTTTCCTTCCTCCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: ESTTSIWRLMSNVLS*ALPHFLCCFLPPAS
Trigger: GCTGGCTGGAGGAAGGAAACAACAAAGGAAGTGAGGTAGTGCCAATGACAGGACATTTGACATGAGTCTCCAGATAGATGTCGTGGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR TCA 90 bp AATGACAGCCTTTGGGAGGTGGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTAAGTGGGAAATGGAGTaGGGCTGGGGTGATCTGAGA +
Preference number: 2 (lower is better)
Translates to: NDSLWEVVYGSDPMLVFCKWEME*GWGDLR
Trigger: TCTCAGATCACCCCAGCCTCACTCCATTTCCCACTT...ACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp TTACCAGCCTCGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCATCACAGTTAGGTCTATaGGGTCATCACCCCAATTTA +
Preference number: 2 (lower is better)
Translates to: LPASTGRQVHLFQSQALASQLGL*GHHPNL
Trigger: TAAATTGGGGTGATGACCCCATAGACCTAACTGTGA...TGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCGAGAGGGCTTCCTTCTaGTTTAGATGGGTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCERASF*FRWVPA
Trigger: AGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTC...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCAAATGTCCTGTCATTaGCACTACCTCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCQMSCH*HYLTSF
Trigger: AAAGGAAGTGAGGTAGTGCCAATGACAGGACATTTG...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 90 bp TTTTTCCTCTTGTCCAAAGGTTCTGACCATGTTCATGACCTAAGCTaGTCCCTGGAAGCATACATGTCCCTGGGAGACAGGAAGGTTCAG +
Preference number: 2 (lower is better)
Translates to: FFLLSKGSDHVHDLS*SLEAYMSLGDRKVQ
Trigger: CTGAACCTTCCTGTCTCCCAGGGACATGTATGCTTCCAGGGACAAGCTTAGGTCATGAACATGGTCAGAACCTTTGGACAAGAGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 90 bp CCTGTCTGCCTTAGGTCTTCCATTTTCCTCAGATGTCTTTCTCACTaGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: PVCLRSSIFLRCLSH*HDLSRSLSTGHSQC
Trigger: GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAGACATCTGAGGAAAATGGAAGACCTAAGGCAGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp AATGACAGCCTTTGGGAGGTGGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTAAGCATACATGTCCCTaGGAGACAGGAAGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: NDSLWEVVYGSDPMLVFCKHTCP*ETGRFR
Trigger: CCTGAACCTTCCTGTCTCCCAGGGACATGTATGCTT...ACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR GCA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCAATGTTGCCACCCAATaGCACCCGTTATTTCCATCC +
Preference number: 2 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIINVATQ*HPLFPS
Trigger: GGATGGAAATAACGGGTGGCATTGGGTGGCAACATT...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
3UTR CAA 90 bp GAGCCACCGCACCCAGAAAAAGCAAATCTCTTAGTATTTTTCCTCTaGTCCAAAGGTTCTGACCATGTTCATGACCTAAGCTTGTCCCTG +
Preference number: 2 (lower is better)
Translates to: EPPHPEKANLLVFFL*SKGSDHVHDLSLSL
Trigger: CAGGGACAAGCTTAGGTCATGAACATGGTCAGAACCTTTGGACAAGAGGAAAAATACTAAGAGATTTGCTTTTTCTGGGTGCGGTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CCA 90 bp AATGACAGCCTTTGGGAGGTGGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTCAAGTGTGGCATTTCTaGAAGCTCTTGATTGCCTTC +
Preference number: 2 (lower is better)
Translates to: NDSLWEVVYGSDPMLVFCQVWHF*KLLIAF
Trigger: GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTG...ACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR GCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCGATCTGAGTTTGTTCTaGTGGTGGGGTATTCTAAAA +
Preference number: 2 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCDLSLF*WWGILK
Trigger: TTTTAGAATACCCCACCAGCAGAACAAACTCAGATC...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR GCA 90 bp TCCCAGGCCCAAGGCAATGACTCCCTTACTTCCTTGCTTCTGATAAAGCAAAATAATGCTTGTCTTTTGTaGTTCCTTCCTGTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: SQAQGNDSLTSLLLIKQNNACLL*FLPVCL
Trigger: AAGGCAGACAGGAAGGAAGCACAAAAGACAAGCATT...ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CCA 72 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTaGCAGTGTCGGGGAATGATGCAGGTTCATCGGGAT +
Preference number: 3 (lower is better)
Translates to: ANGQRTPFPGLA*QCRGMMQVHRD
Trigger: ATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CCA 72 bp AGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTaGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: SGELCGTQVWHF*KLLIAFWSCLC
Trigger: GCAGAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CCA 72 bp AGGTTCAGGGAACTTCTCCACCCTGATTCTAGCCAATaGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCA +
Preference number: 3 (lower is better)
Translates to: RFRELLHPDSSQ*PANSFSRVGLA
Trigger: TGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGCTAGAATCAGGGTGGAGAAGTTCCCTGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CAA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGGATGGGTTCCTGCTTTaGGATGCTGATCTATTACAG +
Preference number: 3 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGDGFLL*DADLLQ
Trigger: CTGTAATAGATCAGCATCCAAAAGCAGGAACCCATC...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CAA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCAGTGACATCCGGACCTaGTGGACTAAGAGGACCCCT +
Preference number: 3 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCSDIRT*WTKRTP
Trigger: AGGGGTCCTCTTAGTCCACAAGGTCCGGATGTCACT...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CAA 90 bp TCCCAGGCCCAAGGCAATGACTCCCTTACTTCCTTGCTTCTGATAAAGCAAAATCGGTTTGAAGGGCATTaGCCTGGAGGGAACAGCCCT +
Preference number: 3 (lower is better)
Translates to: SQAQGNDSLTSLLLIKQNRFEGH*PGGNSP
Trigger: AGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCG...ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CCA 72 bp AGTGTTATTAAGTACATGAGTGACATCCGGACCTTGTaGACTAAGAGGACCCCTAACCAAGGGTCAGCGGGG +
Preference number: 3 (lower is better)
Translates to: SVIKYMSDIRTL*TKRTPNQGSAG
Trigger: CCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGTCCACAAGGTCCGGATGTCACTCATGTACTTAATAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CAA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCTTTTCCAGGGTTGGCTaGGCAGTGTCGGGGAATGAT +
Preference number: 3 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCFSRVG*AVSGND
Trigger: ATCATTCCCCGACACTGCCAAGCCAACCCTGGAAAA...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR GCA 72 bp TTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATaGCACCCGTTATTTCCATCCCTCTCCATCACCATC +
Preference number: 3 (lower is better)
Translates to: LPHYLSPNVATQ*HPLFPSLSITI
Trigger: GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
3UTR-3UTR CAA 90 bp GTGGGCACAATGATCGTCGGTTTGAAGGGCATTTGCCTGGAGGGAACAGCCCTGTTAGTATTTTTCCTCTaGTCCAAAGGTTCTGACCAT +
Preference number: 3 (lower is better)
Translates to: VGTMIVGLKGICLEGTALLVFFL*SKGSDH
Trigger: ATGGTCAGAACCTTTGGACAAGAGGAAAAATACTAA...CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCGACGATCATTGTGCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CCA 72 bp ATGTGGGACGTAGAGCTGGAGTCCACGACATCTATCTaGAGACTCATGTCAAATGTCCTGTCATTGGCACTA +
Preference number: 3 (lower is better)
Translates to: MWDVELESTTSI*RLMSNVLSLAL
Trigger: TAGTGCCAATGACAGGACATTTGACATGAGTCTCCAGATAGATGTCGTGGACTCCAGCTCTACGTCCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR-3UTR CAA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCGTTCATGACCTAAGCTaGTCCCTGGAAGCATACATG +
Preference number: 3 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCVHDLS*SLEAYM
Trigger: CATGTATGCTTCCAGGGACAAGCTTAGGTCATGAAC...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR GCA 72 bp CCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTaGCTCATTATCTCTCCCCAAATGTTGCCACCCAAT +
Preference number: 3 (lower is better)
Translates to: PNLYTPQLSLLS*LIISPQMLPPN
Trigger: ATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
3UTR-3UTR CAA 90 bp AATGACAGCCTTTGGGAGGTGGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTTCAAATGTCCTGTCATaGGCACTACCTCACTTCCTT +
Preference number: 3 (lower is better)
Translates to: NDSLWEVVYGSDPMLVFCSNVLS*ALPHFL
Trigger: AAGGAAGTGAGGTAGTGCCAATGACAGGACATTTGA...ACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR TCA 72 bp TCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTaGTCTATTACAGTAGGAAGTGGGGTTGAAGGGATG +
Preference number: 3 (lower is better)
Translates to: SFWFRWVPAFGC*SITVGSGVEGM
Trigger: CATCCCTTCAACCCCACTTCCTACTGTAATAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR TCA 72 bp ACTTGTGGCCATCCCTTTCAGAACAGCATGGAGCTCTaGGGACTTAGTATTACAGAAGGTGAAGTGTTATTA +
Preference number: 3 (lower is better)
Translates to: TCGHPFQNSMEL*GLSITEGEVLL
Trigger: TAATAACACTTCACCTTCTGTAATACTAAGTCCTCAGAGCTCCATGCTGTTCTGAAAGGGATGGCCACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CATCACCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTCGTGGTGGCGGCAGGTaGGTACTCACGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HHHPHNTSRAPHLSMPGSRGGGR*VLTASP
Trigger: GGGGCTGGCCGTGAGTACTCACCTGCCGCCACCACG...AGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp GTGGGCACAATGATCGTCGGTTTGAAGGGCATTTGCCTGGAGGGAACAGCCCTGCTTGCCCACAGCATCTaGCACAGCAGCCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGTMIVGLKGICLEGTALLAHSI*HSSPGR
Trigger: CCTCCCCGGGCTGCTGTGCCAGATGCTGTGGGCAAG...CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCGACGATCATTGTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCGAGCCAGAACGTCCTaGGCCCGCTGGTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHRARTS*ARWLVR
Trigger: CCTCACCAACCAGCGGGCTCAGGACGTTCTGGCTCG...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp CATCACCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTCCACACCAGCCCGTCTaGGACAGTCGGAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: HHHPHNTSRAPHLSMPGSPHQPV*DSRRPW
Trigger: CCAGGGTCTCCGACTGTCCCAGACGGGCTGGTGTGG...AGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACTCGGGGGAGCGGGTCTaGGGCTCCGACTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHSGERV*GSDSPV
Trigger: AACAGGAGAGTCGGAGCCCCAGACCCGCTCCCCCGA...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCTCGGGGGAGCGGGTCTaGGGCTCCGACTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSSGERV*GSDSPV
Trigger: AACAGGAGAGTCGGAGCCCCAGACCCGCTCCCCCGA...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACCTTGCCCACAGCATCTaGCACAGCAGCCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHLAHSI*HSSPGR
Trigger: CCTCCCCGGGCTGCTGTGCCAGATGCTGTGGGCAAG...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGACCAGCTTGTCCGTCTaGGAGTTTCGTGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMTSLSV*EFRGCR
Trigger: GCGGCAGCCACGAAACTCCCAGACGGACAAGCTGGT...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACTTGGGGCAGAGTGGCTaGGGGACCTTAGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHLGQSG*GTLAGE
Trigger: CTCTCCCGCTAAGGTCCCTCAGCCACTCTGCCCCAA...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR TCA 90 bp CTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCCGTGGTGGCGGCAGGTaGGTACTCACGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LIISPQMLPPNATRYFHPRGGGR*VLTASP
Trigger: GGGGCTGGCCGTGAGTACTCACCTGCCGCCACCACG...GGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR TCA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACGGGTCAGGCACACAGTaGCAGTGGCCAGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNGSGTQ*QWPEAP
Trigger: AGGGGCTTCTGGCCACTGTCACTGTGTGCCTGACCC...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACCGAGCGGGATCTCCTTaGCCTGCACCAGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHRAGSP*PAPGWW
Trigger: CCACCATCCTGGTGCAGGGCAAGGAGATCCCGCTCG...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp GTGGGCACAATGATCGTCGGTTTGAAGGGCATTTGCCTGGAGGGAACAGCCCTGCTGCGCTTCGGCACTTaGCCACAGCATCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: VGTMIVGLKGICLEGTALLRFGT*PQHLAQ
Trigger: CTGTGCCAGATGCTGTGGGCAAGTGCCGAAGCGCAG...CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCGACGATCATTGTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAATTGGGGCAGAGTGGCTaGGGGACCTTAGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQLGQSG*GTLAGE
Trigger: CTCTCCCGCTAAGGTCCCTCAGCCACTCTGCCCCAA...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR TCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCGAGCCAGAACGTCCTaGGCCCGCTGGTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHRARTS*ARWLVR
Trigger: CCTCACCAACCAGCGGGCTCAGGACGTTCTGGCTCG...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR TCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAGGGTCAGGCACACAGTaGCAGTGGCCAGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPGSGTQ*QWPEAP
Trigger: AGGGGCTTCTGGCCACTGTCACTGTGTGCCTGACCC...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGCCAGGCCCAAGGCAATaGCTCCCTTACTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMPGPRQ*LPYFLA
Trigger: AGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGG...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGGGTCCACTTGGTATTTaGGGCCCAGCTCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMGPLGI*GPAHPR
Trigger: CCTTGGATGAGCTGGGCCGCAAATACCAAGTGGACC...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR GCA 90 bp GGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCAGCACCGGTCCAGAATaGGCTCTGGGGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GTQVWHFWKLLIAFWSCLSTGPE*ALGPPS
Trigger: TGAAGGGGGCCCCAGAGCGCATTCTGGACCGGTGCT...GAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACGAGCGGGATCTCCTTaGCCTGCACCAGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPRAGSP*PAPGWW
Trigger: CCACCATCCTGGTGCAGGGCAAGGAGATCCCGCTCG...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACGCCGTGCACCACGCATaGCTTGGCTTCTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNAVHHA*LGFSGV
Trigger: AACCCCAGAGAAGCCAAGGCATGCGTGGTGCACGGC...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACAGCCGTGCACCACGCATaGCTTGGCTTCTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTAVHHA*LGFSGV
Trigger: AACCCCAGAGAAGCCAAGGCATGCGTGGTGCACGGC...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCCCCCATTCTCTGCCGTaGTGGCGGCAGGTGAGTACT +
Preference number: 4 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFPHSLP*WRQVST
Trigger: AGTACTCACCTGCCGCCACCACGGCAGAGAATGGGG...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAACCAGCACGTGGCTCTaGGGGCTGTCTTCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPTSTWL*GLSSRS
Trigger: CGAGCGAGAAGACAGCCCCCAGAGCCACGTGCTGGT...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCCCTGCACCAGGATGGTaGAGCACCGGTCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSPAPGW*STGPEC
Trigger: GCATTCTGGACCGGTGCTCCACCATCCTGGTGCAGG...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCTGCCCTGCACCAGGATaGTGGAGCACCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSCPAPG*WSTGPE
Trigger: TTCTGGACCGGTGCTCCACCATCCTGGTGCAGGGCA...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCCTTGCCCACAGCATCTaGCACAGCAGCCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNALAHSI*HSSPGR
Trigger: CCTCCCCGGGCTGCTGTGCCAGATGCTGTGGGCAAG...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATGAGCCCGCTGGTTGGTaGGGCCCTTGGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYEPAGW*GPWTGP
Trigger: TGGACCTGTCCAAGGGCCTCACCAACCAGCGGGCTC...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR TCA 90 bp CTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCGCTGACGGCAGAACTTaGCCCACTCAGGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LSPNVATQCHPLFPSLSIADGRT*PTQGLW
Trigger: CCACAACCCCTGAGTGGGTCAAGTTCTGCCGTCAGC...GATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR TCA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCGCTGACGGCAGAACTTaGCCCACTCAGGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: NVATQCHPLFPSLSITIPADGRT*PTQGLW
Trigger: CCACAACCCCTGAGTGGGTCAAGTTCTGCCGTCAGC...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR TCA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACAAGCTGTAGCCCAGGATaGGGGAGAGCACGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTSCSPG*GRARRR
Trigger: CCTTCTTCGTGCTCTCCCTCATCCTGGGCTACAGCT...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAGCTGTAGCCCAGGATaGGGGAGAGCACGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHSCSPG*GRARRR
Trigger: CCTTCTTCGTGCTCTCCCTCATCCTGGGCTACAGCT...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCAAAGTGGCCCCAGACTaGTCTTCGGTGGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSKVAPD*SSVVSA
Trigger: GGCTGACACCACCGAAGATCAGTCTGGGGCCACTTT...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCTCTCCTGTCCTGCCTTaGAGACGGCGCGGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LSPNVATQCHPLFPSLSISPVLP*RRRGCR
Trigger: TCTGCAACCGCGCCGTCTTCAAGGCAGGACAGGAGA...GATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGGTGGCTGCCGCTTCATaGTATCACTCTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGVAAAS*YHSQLP
Trigger: AGGCAGCTGAGAGTGATATCATGAAGCGGCAGCCAC...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACGAGGCTGGGGTGATCTaGGAGGGCTTCCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNEAGVI*EGFLLV
Trigger: AACCAGAAGGAAGCCCTCTCAGATCACCCCAGCCTC...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp GTGGGCACAATGATCGTCGGTTTGAAGGGCATTTGCCTGGAGGGAACAGCCCTGTCCTCTGCGTTGATCTaGATCTTCTCTCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VGTMIVGLKGICLEGTALSSALI*IFSPSR
Trigger: CCGGGAGGGAGAGAAGATGCAGATCAACGCAGAGGA...CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCGACGATCATTGTGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR GCA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCAGCACCGGTCCAGAATaGGCTCTGGGGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PNVATQCHPLFPSLSITISTGPE*ALGPPS
Trigger: TGAAGGGGGCCCCAGAGCGCATTCTGGACCGGTGCT...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp GGACCTTGTGGACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGCTGTGCCCAGGTCAATaGAAAGGATGGTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GPCGLRGPLTKGQRGTLWLCPGQ*KGWSQC
Trigger: GCACTGTGACCATCCTTTGCATTGACCTGGGCACAG...CCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGTCCACAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCATGAGGTCAGCCCACTaGACCACCACGATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFMRSAH*TTTMLA
Trigger: TGCCAGCATCGTGGTGGTGCAGTGGGCTGACCTCAT...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp GGACCTTGTGGACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGTCTCTCCCCAAATGTTaGCACCCAATGCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: GPCGLRGPLTKGQRGTLWSLPKC*HPMPPV
Trigger: AACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA...CCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGTCCACAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACATCTTGGGGCAGAGTaGCTGAGGGACCTTAGCGGG +
Preference number: 4 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQHLGAE*LRDLSG
Trigger: CCCGCTAAGGTCCCTCAGCCACTCTGCCCCAAGATG...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATACCAGCACGTGGCTCTaGGGGCTGTCTTCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHTSTWL*GLSSRS
Trigger: CGAGCGAGAAGACAGCCCCCAGAGCCACGTGCTGGT...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp GTGGGCACAATGATCGTCGGTTTGAAGGGCATTTGCCTGGAGGGAACAGCCCTGTTCATCACCAGCACGTaGCTCTGGGGGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VGTMIVGLKGICLEGTALFITST*LWGLSS
Trigger: AGAAGACAGCCCCCAGAGCCACGTGCTGGTGATGAA...CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCGACGATCATTGTGCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACCTGCACCAGGATGGTaGAGCACCGGTCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPPAPGW*STGPEC
Trigger: GCATTCTGGACCGGTGCTCCACCATCCTGGTGCAGG...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCTGCCCTGCACCAGGATaGTGGAGCACCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NVATQCHPLFPSLSITIPCPAPG*WSTGPE
Trigger: TTCTGGACCGGTGCTCCACCATCCTGGTGCAGGGCA...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCTGCCCTGCACCAGGATaGTGGAGCACCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCCPAPG*WSTGPE
Trigger: TTCTGGACCGGTGCTCCACCATCCTGGTGCAGGGCA...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCACCGTCACGGCCACAATaGCTCCCTGCCTCTGACATC +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPPSRPQ*LPASDI
Trigger: GATGTCAGAGGCAGGGAGCCATTGTGGCCGTGACGG...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTACCAGCTTGTCCGTCTaGGAGTTTCGTGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LLSCLIISPQMLPPNATRTSLSV*EFRGCR
Trigger: GCGGCAGCCACGAAACTCCCAGACGGACAAGCTGGT...ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACAAAGCCACCCAGTGCCTaGATCATCCCGATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTKPPSA*IIPICP
Trigger: CGGACAGATCGGGATGATCCAGGCACTGGGTGGCTT...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR TCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATTCTCCTGTCCTGCCTTaGAGACGGCGCGGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GICLEGTALPPKTSKANHSPVLP*RRRGCR
Trigger: TCTGCAACCGCGCCGTCTTCAAGGCAGGACAGGAGA...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACGATACCGCCGCAGGATaGGCTTTCGGACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHDTAAG*AFGPHH
Trigger: ATGATGAGGTCCGAAAGCTCATCCTGCGGCGGTATC...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCGGCAGTGTCGGGGAATaGTGCAGGTTCATCGGGATG +
Preference number: 4 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCGSVGE*CRFIGM
Trigger: CATCCCGATGAACCTGCATCATTCCCCGACACTGCC...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp ACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTCCTTCTGTTTCTTCTTaGCGCCCCCATTCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TKRTPNQGSAGNSVAHKCPSVSS*RPHSLP
Trigger: CGGCAGAGAATGGGGGCGGCAAGAAGAAACAGAAGG...ACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR GCA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACCCTTCTGTTTCTTCTTaGCGCCCCCATTCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHPSVSS*RPHSLP
Trigger: CGGCAGAGAATGGGGGCGGCAAGAAGAAACAGAAGG...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR GCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCAGTTCTTCCGTGCCATaGGCTTGGCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSSSSVP*AWLSGS
Trigger: TGACCCTGACAGCCAAGCGCATGGCACGGAAGAACT...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCTGCGCTTCGGCACTTaGCCACAGCATCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHLRFGT*PQHLAQ
Trigger: CTGTGCCAGATGCTGTGGGCAAGTGCCGAAGCGCAG...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCGCCGTGCACCACGCATaGCTTGGCTTCTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNAAVHHA*LGFSGV
Trigger: AACCCCAGAGAAGCCAAGGCATGCGTGGTGCACGGC...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGTGGGAGTTTCGTGGCTaGCGCTTCATGATATCACTC +
Preference number: 4 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMWEFRG*RFMISL
Trigger: GAGTGATATCATGAAGCGGCAGCCACGAAACTCCCA...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAAATGAGGTCAGCCCACTaGACCACCACGATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQMRSAH*TTTMLA
Trigger: TGCCAGCATCGTGGTGGTGCAGTGGGCTGACCTCAT...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCGGAGGGCTACACCCATaGCTGGGCAGTAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFGGLHP*LGSKRE
Trigger: TTCTCTCTTACTGCCCAGGCATGGGTGTAGCCCTCC...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCCAGGGATAGAGTCCTaGAGGAAGCTAACGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCPGIES*RKLTGV
Trigger: CACCCCCGTTAGCTTCCTGCAGGACTCTATCCCTGG...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGTTCTGGTCCTGCCTCTaGTGCTACCCTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGFWSCL*CYPDEI
Trigger: GATCTCATCAGGGTAGCAGCAGAGGCAGGACCAGAA...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGTGGAGGGAACAGCCCTaGCACCTAAGACGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGWREQP*HLRRQK
Trigger: CTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCA...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCCATTCTCTGCCGTaGTGGCGGCAGGTGAGTACT +
Preference number: 4 (lower is better)
Translates to: PNVATQCHPLFPSLSITIPHSLP*WRQVST
Trigger: AGTACTCACCTGCCGCCACCACGGCAGAGAATGGGG...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGTCCAAGGACAGCTTGTaGTCATCCATTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGSKDSL*SSIATS
Trigger: GGAGGTGGCAATGGATGACCACAAGCTGTCCTTGGA...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CCA 90 bp GTGGGCACAATGATCGTCGGTTTGAAGGGCATTTGCCTGGAGGGAACAGCCCTGTTGGACAGGTCCACTTaGTATTTGCGGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VGTMIVGLKGICLEGTALLDRST*YLRPSS
Trigger: TGAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAA...CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCGACGATCATTGTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCACCAGCACGTGGCTCTaGGGGCTGTCTTCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSTSTWL*GLSSRS
Trigger: CGAGCGAGAAGACAGCCCCCAGAGCCACGTGCTGGT...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGAGCAAAGCTTCTCCGTaGGAAAGTTCAGCTCATCCG +
Preference number: 4 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMSKASP*ESSAHP
Trigger: CGGATGAGCTGAACTTTCCCACGGAGAAGCTTTGCT...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCCGTCACGGCCACAATaGCTCCCTGCCTCTGACATC +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHPSRPQ*LPASDI
Trigger: GATGTCAGAGGCAGGGAGCCATTGTGGCCGTGACGG...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAAAGCCACCCAGTGCCTaGATCATCCCGATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPKPPSA*IIPICP
Trigger: CGGACAGATCGGGATGATCCAGGCACTGGGTGGCTT...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCGGCTACACCCATGCCTaGGCAGTAAGAGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFGYTHA*AVREKG
Trigger: GCCTTTCTCTCTTACTGCCCAGGCATGGGTGTAGCC...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGGACATCCGGACCTTGTaGACTAAGAGGACCCCTAAC +
Preference number: 4 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGDIRTL*TKRTPN
Trigger: GTTAGGGGTCCTCTTAGTCCACAAGGTCCGGATGTC...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCCCTTTCGCCCAGGCTaGAGTGTAATGGCACGATCT +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHPFRPG*SVMARS
Trigger: AGATCGTGCCATTACACTCCAGCCTGGGCGAAAGGG...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCAGCCAGGCTTAGAGAATaGGCAAGGCTGCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPARLRE*ARLPAE
Trigger: CTCTGCAGGCAGCCTTGCCCATTCTCTAAGCCTGGC...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCGGGTCAGGCACACAGTaGCAGTGGCCAGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCGSGTQ*QWPEAP
Trigger: AGGGGCTTCTGGCCACTGTCACTGTGTGCCTGACCC...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAGACTCATGGGAATGTTaGGCCGGGCTGCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPDSWEC*AGLQCP
Trigger: AGGACATTGCAGCCCGGCTCAACATTCCCATGAGTC...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCGTGGCTGCCGCTTCATaGTATCACTCTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSPNVATQCHPLFPSLSIVAAAS*YHSQLP
Trigger: AGGCAGCTGAGAGTGATATCATGAAGCGGCAGCCAC...GATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCGGCAGTGTCGGGGAATaGTGCAGGTTCATCGGGATG +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFGSVGE*CRFIGM
Trigger: CATCCCGATGAACCTGCATCATTCCCCGACACTGCC...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGTCCAGTGCAATGAAATaGCAGCCTTTGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGSSAMK*QPLGGG
Trigger: ACCACCTCCCAAAGGCTGTCATTTCATTGCACTGGA...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAACCAGGCCCAAGGCAATaGCTCCCTTACTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LTKGQRGTLWHTSVAFLEPGPRQ*LPYFLA
Trigger: AGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGG...TTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGGTGTTCAATCTCCATTaGTATGGGTGTCCGCCCAAC +
Preference number: 4 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGVFNLH*YGCPPN
Trigger: GTTGGGCGGACACCCATAGCAATGGAGATTGAACAC...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR GCA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAAAGTTCTTCCGTGCCATaGGCTTGGCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQSSSVP*AWLSGS
Trigger: TGACCCTGACAGCCAAGCGCATGGCACGGAAGAACT...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCCTGTGCCCAGGTCAATaGAAAGGATGGTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSLCPGQ*KGWSQC
Trigger: GCACTGTGACCATCCTTTGCATTGACCTGGGCACAG...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACAGATGCTGGCAAAGAATaGCGTGTGGCACGTGAACTC +
Preference number: 4 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTDAGKE*RVAREL
Trigger: GAGTTCACGTGCCACACGGCATTCTTTGCCAGCATC...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCGATGCTGGCAAAGAATaGCGTGTGGCACGTGAACTC +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSDAGKE*RVAREL
Trigger: GAGTTCACGTGCCACACGGCATTCTTTGCCAGCATC...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAAGGAGGGCTACACCCATaGCTGGGCAGTAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQGGLHP*LGSKRE
Trigger: TTCTCTCTTACTGCCCAGGCATGGGTGTAGCCCTCC...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGAATGTTGCCACCCAATaGCACCCGTTATTTCCATCC +
Preference number: 4 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMNVATQ*HPLFPS
Trigger: GGATGGAAATAACGGGTGGCATTGGGTGGCAACATT...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCCCAGGGATAGAGTCCTaGAGGAAGCTAACGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFPGIES*RKLTGV
Trigger: CACCCCCGTTAGCTTCCTGCAGGACTCTATCCCTGG...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCATTGCCTTCTGGTCCTaGCTCTGCTGCTACCCTGAT +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSIAFWS*LCCYPD
Trigger: ATCAGGGTAGCAGCAGAGGCAGGACCAGAAGGCAAT...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCATTCTCTGCCGTGGTaGCGGCAGGTGAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHHSLPW*RQVSTH
Trigger: GTGAGTACTCACCTGCCGCCACCACGGCAGAGAATG...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACTCCAAGGACAGCTTGTaGTCATCCATTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHSKDSL*SSIATS
Trigger: GGAGGTGGCAATGGATGACCACAAGCTGTCCTTGGA...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACTTGGACAGGTCCACTTaGTATTTGCGGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHLDRST*YLRPSS
Trigger: TGAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAA...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCCAATCTCCATTGCTATaGGTGTCCGCCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFQSPLL*VSAQPP
Trigger: TGGAGGTTGGGCGGACACCCATAGCAATGGAGATTG...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCTTCATCACCAGCACGTaGCTCTGGGGGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: NVATQCHPLFPSLSITIPFITST*LWGLSS
Trigger: AGAAGACAGCCCCCAGAGCCACGTGCTGGTGATGAA...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATCCGTCACGGCCACAATaGCTCCCTGCCTCTGACATC +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYPSRPQ*LPASDI
Trigger: GATGTCAGAGGCAGGGAGCCATTGTGGCCGTGACGG...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CATCACCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTCCTCCAGATCATTCATaGTCCGGTCATCCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: HHHPHNTSRAPHLSMPGSPPDHS*SGHPSR
Trigger: TCGACTGGGATGACCGGACCATGAATGATCTGGAGG...AGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCAGGCTACACCCATGCCTaGGCAGTAAGAGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPGYTHA*AVREKG
Trigger: GCCTTTCTCTCTTACTGCCCAGGCATGGGTGTAGCC...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CATCACCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTCTCTTGATTGCCTTCTaGTCCTGCCTCTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: HHHPHNTSRAPHLSMPGSLLIAF*SCLCCY
Trigger: GTAGCAGCAGAGGCAGGACCAGAAGGCAATCAAGAG...AGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTCTCCTTTTCCAGGGTTaGCTTGGCAGTGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: LLSCLIISPQMLPPNATRLLFQG*LGSVGE
Trigger: TTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAG...ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 72 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTaGATTGCCTTCTGGTCCTGCCTCTGCTGCTACCCT +
Preference number: 4 (lower is better)
Translates to: LCGTQVWHFWKL*IAFWSCLCCYP
Trigger: AGGGTAGCAGCAGAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATAGCTGTAGCCCAGGATaGGGGAGAGCACGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYSCSPG*GRARRR
Trigger: CCTTCTTCGTGCTCTCCCTCATCCTGGGCTACAGCT...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAGATGGCAGATTCAGTTaGCAGAATCCCAGCACACGC +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPDGRFS*QNPSTR
Trigger: GCGTGTGCTGGGATTCTGTCAACTGAATCTGCCATC...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTCGTTACCCTCTGATATaGTGCCCACGCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLSCLIISPQMLPPNATRRYPLI*CPRLWQ
Trigger: TTGCCAAAGGCGTGGGCATCATATCAGAGGGTAACG...ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACTGGCTTCTCTGGGGTTaGCTTGACTCATGGGAATGT +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHWLLWG*LDSWEC
Trigger: ACATTCCCATGAGTCAAGTCAACCCCAGAGAAGCCA...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACTCTCTGTGTGGTTCTTaGGGATCTCATCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHSLCGS*GSHRAA
Trigger: AGCAGCTCGATGAGATCCTCAAGAACCACACAGAGA...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCGTGGCTGCCGCTTCATaGTATCACTCTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFVAAAS*YHSQLP
Trigger: AGGCAGCTGAGAGTGATATCATGAAGCGGCAGCCAC...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCGCAACTTAGCCTGCTaGGTTGCCTCATTATCTCTC +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHRNLAC*VASLSL
Trigger: GAGAGATAATGAGGCAACTCAGCAGGCTAAGTTGCG...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAAAAGTGGGAAATGGAGTaGGGCTGGGGTGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: RLGDKSTFSSLRLLHSPEKWEME*GWGDLR
Trigger: TCTCAGATCACCCCAGCCTCACTCCATTTCCCACTT...TTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCTACCCTGATGAGATCTaGGTTTGTTCTGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSYPDEI*VCSAGG
Trigger: CCCACCAGCAGAACAAACTCAGATCTCATCAGGGTA...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCTCTCCTGTAGGAACCTaGAACCAACTCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCSPVGT*NQLSSP
Trigger: TGGGCTGGAGAGTTGGTTTCAGGTTCCTACAGGAGA...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACTTGTGGTCATCCATTaGCACCTCCTTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTLVVIH*HLLLQL
Trigger: GAGCTGAAGAAGGAGGTGGCAATGGATGACCACAAG...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR GCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATAGTTCTTCCGTGCCATaGGCTTGGCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GICLEGTALPPKTSKANHSSSVP*AWLSGS
Trigger: TGACCCTGACAGCCAAGCGCATGGCACGGAAGAACT...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCGATGTTCTCCTGTCCTaGCTTGAAGACGGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFDVLLS*LEDGAV
Trigger: AACCGCGCCGTCTTCAAGGCAGGACAGGAGAACATC...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCGATGTTCTCCTGTCCTaGCTTGAAGACGGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNADVLLS*LEDGAV
Trigger: AACCGCGCCGTCTTCAAGGCAGGACAGGAGAACATC...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCAGCACCGGTCCAGAATaGGCTCTGGGGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIISTGPE*ALGPPS
Trigger: TGAAGGGGGCCCCAGAGCGCATTCTGGACCGGTGCT...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCCGAGCGGGATCTCCTTaGCCTGCACCAGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIIRAGSP*PAPGWW
Trigger: CCACCATCCTGGTGCAGGGCAAGGAGATCCCGCTCG...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCCTGCGCTTCGGCACTTaGCCACAGCATCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCLRFGT*PQHLAQ
Trigger: CTGTGCCAGATGCTGTGGGCAAGTGCCGAAGCGCAG...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAAAAAGGATGGTCACAGTaGCCAGAGGTAGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQKGWSQ*PEVGGC
Trigger: ACATCCCCCTACCTCTGGGCACTGTGACCATCCTTT...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATGAAGAAGCCACCCAGTaGCTGGATCATCCCGATCTG +
Preference number: 4 (lower is better)
Translates to: GICLEGTALPPKTSKANHEEATQ*LDHPDL
Trigger: CAGATCGGGATGATCCAGGCACTGGGTGGCTTCTTC...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR GCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATGAAGAAGCCACCCAGTaGCTGGATCATCCCGATCTG +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHEEATQ*LDHPDL
Trigger: CAGATCGGGATGATCCAGGCACTGGGTGGCTTCTTC...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR GCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCGGAGGGCTACACCCATaGCTGGGCAGTAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNAGGLHP*LGSKRE
Trigger: TTCTCTCTTACTGCCCAGGCATGGGTGTAGCCCTCC...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTGGAAGCTCTTGATTaGCTTCTGGTCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCLEALD*LLVLPL
Trigger: CAGAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAG...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCACTGGAAGCTCTTGATTaGCTTCTGGTCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPLEALD*LLVLPL
Trigger: CAGAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAG...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATGGTTTGAAGGGCATTTaGCTGGAGGGAACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHGLKGI*LEGTAL
Trigger: CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACC...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAACATCTTGGGGCAGAGTaGCTGAGGGACCTTAGCGGG +
Preference number: 4 (lower is better)
Translates to: RLLHSPEEPFVIARSEGEHLGAE*LRDLSG
Trigger: CCCGCTAAGGTCCCTCAGCCACTCTGCCCCAAGATG...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCATTCTCTGCCGTGGTaGCGGCAGGTGAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSHSLPW*RQVSTH
Trigger: GTGAGTACTCACCTGCCGCCACCACGGCAGAGAATG...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACAATCACAATGCCCCTaGCAGTGCCTTCAACACAGT +
Preference number: 4 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTQSQCP*QCLQHS
Trigger: ACTGTGTTGAAGGCACTGCCAGGGGCATTGTGATTG...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACCTGTCTTCTCGCTCGTaGATAGACAGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHLSSRS*IDSWYL
Trigger: CAAGTACCAGCTGTCTATCCACGAGCGAGAAGACAG...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACCTGTCTTCTCGCTCGTaGATAGACAGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNLSSRS*IDSWYL
Trigger: CAAGTACCAGCTGTCTATCCACGAGCGAGAAGACAG...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCTGCACCAGGATGGTaGAGCACCGGTCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: CLIISPQMLPPNATRYFHPAPGW*STGPEC
Trigger: GCATTCTGGACCGGTGCTCCACCATCCTGGTGCAGG...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACGGTCAATGCAAAGGATaGTCACAGTGCCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNGQCKG*SQCPEV
Trigger: TACCTCTGGGCACTGTGACCATCCTTTGCATTGACC...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCGGTCAATGCAAAGGATaGTCACAGTGCCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSGQCKG*SQCPEV
Trigger: TACCTCTGGGCACTGTGACCATCCTTTGCATTGACC...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp GGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCCGTCTGGGAGTTTCGTaGCTGCCGCTTCATGATATC +
Preference number: 4 (lower is better)
Translates to: GTQVWHFWKLLIAFWSCLRLGVS*LPLHDI
Trigger: GATATCATGAAGCGGCAGCCACGAAACTCCCAGACG...GAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACGTCTGGGAGTTTCGTaGCTGCCGCTTCATGATATC +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPRLGVS*LPLHDI
Trigger: GATATCATGAAGCGGCAGCCACGAAACTCCCAGACG...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCCCTCCAGATCATTCATaGTCCGGTCATCCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LSPNVATQCHPLFPSLSIPPDHS*SGHPSR
Trigger: TCGACTGGGATGACCGGACCATGAATGATCTGGAGG...GATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAACATAGTGGAGTGGGATaGAAAAGGATCTGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RLGDKSTFSSLRLLHSPEHSGVG*KRIWSG
Trigger: CCCCGACCAGATCCTTTTCCATCCCACTCCACTATG...TTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACAGAGAGGGCTTCCTTCTaGTTTAGATGGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTERASF*FRWVPA
Trigger: AGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTC...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCAAGCATACATGTCCCTaGGAGACAGGAAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFKHTCP*ETGRFR
Trigger: CCTGAACCTTCCTGTCTCCCAGGGACATGTATGCTT...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCACAGCCTTTGGGAGGTaGTTTATGGGTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSTAFGR*FMGLTQ
Trigger: TTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGT...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACAACAGCCTTTGGGAGGTaGTTTATGGGTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTTAFGR*FMGLTQ
Trigger: TTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGT...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 72 bp ATTCTAGCCAATGGCCAGCGAACTCCTTTTCCAGGGTaGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ILANGQRTPFPG*AWQCRGMMQVH
Trigger: ATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGCTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCTCTCCTGTCCTGCCTTaGAGACGGCGCGGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIISPVLP*RRRGCR
Trigger: TCTGCAACCGCGCCGTCTTCAAGGCAGGACAGGAGA...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCGATGGCAGATTCAGTTaGCAGAATCCCAGCACACGC +
Preference number: 4 (lower is better)
Translates to: PNVATQCHPLFPSLSITIDGRFS*QNPSTR
Trigger: GCGTGTGCTGGGATTCTGTCAACTGAATCTGCCATC...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTCATCCGTGTCGAATTTaGAGCCCCGAGGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: LLSCLIISPQMLPPNATRHPCRI*SPEETF
Trigger: GAAAGTTTCCTCGGGGCTTCAAATTCGACACGGATG...ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCGTTACCCTCTGATATaGTGCCCACGCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHRYPLI*CPRLWQ
Trigger: TTGCCAAAGGCGTGGGCATCATATCAGAGGGTAACG...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCAGTCTCGTTACCCTCTaGTATGATGCCCACGCCTTT +
Preference number: 4 (lower is better)
Translates to: NVATQCHPLFPSLSITIPSLVTL*YDAHAF
Trigger: AAAGGCGTGGGCATCATATCAGAGGGTAACGAGACT...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCTGGCTTCTCTGGGGTTaGCTTGACTCATGGGAATGT +
Preference number: 4 (lower is better)
Translates to: LSPNVATQCHPLFPSLSIWLLWG*LDSWEC
Trigger: ACATTCCCATGAGTCAAGTCAACCCCAGAGAAGCCA...GATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCTCTCTGTGTGGTTCTTaGGGATCTCATCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NVATQCHPLFPSLSITIPSLCGS*GSHRAA
Trigger: AGCAGCTCGATGAGATCCTCAAGAACCACACAGAGA...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTCGCAACTTAGCCTGCTaGGTTGCCTCATTATCTCTC +
Preference number: 4 (lower is better)
Translates to: LLSCLIISPQMLPPNATRRNLAC*VASLSL
Trigger: GAGAGATAATGAGGCAACTCAGCAGGCTAAGTTGCG...ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CATCACCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTCAGAAGAACCTTTTGTaGTTGCAAGGTCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HHHPHNTSRAPHLSMPGSQKNLL*LQGLKG
Trigger: CCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTG...AGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACGGTGGTTTATGGGTCTaGCCCAATGCTTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNGGLWV*PNACLL
Trigger: CAAAAGACAAGCATTGGGTCAGACCCATAAACCACC...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTCCTCTGCGTTGATCTaGATCTTCTCTCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYSSALI*IFSPSR
Trigger: CCGGGAGGGAGAGAAGATGCAGATCAACGCAGAGGA...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR GCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATCTGTGCCCAGGTCAATaGAAAGGATGGTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GICLEGTALPPKTSKANHLCPGQ*KGWSQC
Trigger: GCACTGTGACCATCCTTTGCATTGACCTGGGCACAG...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCACAGGGACCATATCTGTaGCCAGGTCAATGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPQGPYL*PGQCKG
Trigger: TCCTTTGCATTGACCTGGGCACAGATATGGTCCCTG...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAACAGGGACCATATCTGTaGCCAGGTCAATGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: RLGDKSTFSSLRLLHSPEQGPYL*PGQCKG
Trigger: TCCTTTGCATTGACCTGGGCACAGATATGGTCCCTG...TTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCGATGCTGGCAAAGAATaGCGTGTGGCACGTGAACTC +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNADAGKE*RVAREL
Trigger: GAGTTCACGTGCCACACGGCATTCTTTGCCAGCATC...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCATGAGGTCAGCCCACTaGACCACCACGATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCMRSAH*TTTMLA
Trigger: TGCCAGCATCGTGGTGGTGCAGTGGGCTGACCTCAT...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCATTGTTCTTCATGCCCTaGTGGAAGACTGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPLFFMP*WKTELR
Trigger: CCGCAACTCAGTCTTCCAGCAGGGCATGAAGAACAA...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTTGTTCTTCATGCCCTaGTGGAAGACTGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LLSCLIISPQMLPPNATRLFFMP*WKTELR
Trigger: CCGCAACTCAGTCTTCCAGCAGGGCATGAAGAACAA...ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCTCTCTCCCCAAATGTTaGCACCCAATGCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: PNVATQCHPLFPSLSITISLPKC*HPMPPV
Trigger: AACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTCTCTCCCCAAATGTTaGCACCCAATGCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: LCGTQVWHFWKLLIAFWSSLPKC*HPMPPV
Trigger: AACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA...GGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATATTGCCTTCTGGTCCTaGCTCTGCTGCTACCCTGAT +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHIAFWS*LCCYPD
Trigger: ATCAGGGTAGCAGCAGAGGCAGGACCAGAAGGCAAT...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATTGGAGGGAACAGCCCTaGCACCTAAGACGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHWREQP*HLRRQK
Trigger: CTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCA...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATGGTTTGAAGGGCATTTaGCTGGAGGGAACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYGLKGI*LEGTAL
Trigger: CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACC...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACATGGGCAAGGCTGCCTaGAGAGCAAAAGTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHMGKAA*RAKVLD
Trigger: ATCTAACACTTTTGCTCTGCAGGCAGCCTTGCCCAT...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATATGGTTCATCCTCCATaGCAGCCTGGATGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYMVHPP*QPGCRR
Trigger: CCTACGGCATCCAGGCTGCCATGGAGGATGAACCAT...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAATCACAATGCCCCTaGCAGTGCCTTCAACACAGT +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPQSQCP*QCLQHS
Trigger: ACTGTGTTGAAGGCACTGCCAGGGGCATTGTGATTG...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCAATCTCCATTGCTATaGGTGTCCGCCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHQSPLL*VSAQPP
Trigger: TGGAGGTTGGGCGGACACCCATAGCAATGGAGATTG...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAAGCAAAGCTTCTCCGTaGGAAAGTTCAGCTCATCCG +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPSKASP*ESSAHP
Trigger: CGGATGAGCTGAACTTTCCCACGGAGAAGCTTTGCT...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCGGTCAATGCAAAGGATaGTCACAGTGCCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCGQCKG*SQCPEV
Trigger: TACCTCTGGGCACTGTGACCATCCTTTGCATTGACC...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCCATAGGCCAAGGAGATaGCAGGGACCATATCTGTGC +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNAHRPRR*QGPYLC
Trigger: GCACAGATATGGTCCCTGCCATCTCCTTGGCCTATG...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCGTCTGGGAGTTTCGTaGCTGCCGCTTCATGATATC +
Preference number: 4 (lower is better)
Translates to: PNVATQCHPLFPSLSITIRLGVS*LPLHDI
Trigger: GATATCATGAAGCGGCAGCCACGAAACTCCCAGACG...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCACCAGCTTGTCCGTCTaGGAGTTTCGTGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIITSLSV*EFRGCR
Trigger: GCGGCAGCCACGAAACTCCCAGACGGACAAGCTGGT...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp TTACCAGCCTCGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCAGAGAGGGCTTCCTTCTaGTTTAGATGGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LPASTGRQVHLFQSQALAERASF*FRWVPA
Trigger: AGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTC...TGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCTCTTGATTGCCTTCTaGTCCTGCCTCTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHLLIAF*SCLCCY
Trigger: GTAGCAGCAGAGGCAGGACCAGAAGGCAATCAAGAG...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCCAGCGGGGAACTCTGTaGCACACAAGTGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFQRGTL*HTSVAF
Trigger: AAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCAGCGGGGAACTCTGTaGCACACAAGTGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHQRGTL*HTSVAF
Trigger: AAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCGACATCCGGACCTTGTaGACTAAGAGGACCCCTAAC +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNADIRTL*TKRTPN
Trigger: GTTAGGGGTCCTCTTAGTCCACAAGGTCCGGATGTC...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp GGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCGGGAATGGAAGAGGCTaGGAAAGAACTTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GTQVWHFWKLLIAFWSCLGNGRG*ERTCGH
Trigger: ATGGCCACAAGTTCTTTCCCAGCCTCTTCCATTCCC...GAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTTTCCAGGGTTGGCTTaGCAGTGTCGGGGAATGATG +
Preference number: 4 (lower is better)
Translates to: LCGTQVWHFWKLLIAFWSFPGLA*QCRGMM
Trigger: CATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA...GGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACCTGATTCTAGCCAATaGCCAGCGAACTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQPDSSQ*PANSFS
Trigger: GGAAAAGGAGTTCGCTGGCCATTGGCTAGAATCAGG...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTGATCTAGCCAGGCTTAGAGAATaGGCAAGGCTGCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LRGLPSGLDGFLLLDADLARLRE*ARLPAE
Trigger: CTCTGCAGGCAGCCTTGCCCATTCTCTAAGCCTGGC...TAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TCCCAGGCCCAAGGCAATGACTCCCTTACTTCCTTGCTTCTGATAAAGCAAAATAAAGTGGCCCCAGACTaGTCTTCGGTGGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SQAQGNDSLTSLLLIKQNKVAPD*SSVVSA
Trigger: GGCTGACACCACCGAAGATCAGTCTGGGGCCACTTT...ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp ACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAAAGTGGCCCCAGACTaGTCTTCGGTGGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: TFSSLRLLHSPEEPFVIAKVAPD*SSVVSA
Trigger: GGCTGACACCACCGAAGATCAGTCTGGGGCCACTTT...TGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCGATGGCAGATTCAGTTaGCAGAATCCCAGCACACGC +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSDGRFS*QNPSTR
Trigger: GCGTGTGCTGGGATTCTGTCAACTGAATCTGCCATC...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATCATCCGTGTCGAATTTaGAGCCCCGAGGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: GICLEGTALPPKTSKANHHPCRI*SPEETF
Trigger: GAAAGTTTCCTCGGGGCTTCAAATTCGACACGGATG...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATAGTCTCGTTACCCTCTaGTATGATGCCCACGCCTTT +
Preference number: 4 (lower is better)
Translates to: GICLEGTALPPKTSKANHSLVTL*YDAHAF
Trigger: AAAGGCGTGGGCATCATATCAGAGGGTAACGAGACT...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCAGTCTCGTTACCCTCTaGTATGATGCCCACGCCTTT +
Preference number: 4 (lower is better)
Translates to: LCGTQVWHFWKLLIAFWSSLVTL*YDAHAF
Trigger: AAAGGCGTGGGCATCATATCAGAGGGTAACGAGACT...GGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCGACTCATGGGAATGTTaGGCCGGGCTGCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCDSWEC*AGLQCP
Trigger: AGGACATTGCAGCCCGGCTCAACATTCCCATGAGTC...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATTGGCTTCTCTGGGGTTaGCTTGACTCATGGGAATGT +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHWLLWG*LDSWEC
Trigger: ACATTCCCATGAGTCAAGTCAACCCCAGAGAAGCCA...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCTCTCTGTGTGGTTCTTaGGGATCTCATCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNASLCGS*GSHRAA
Trigger: AGCAGCTCGATGAGATCCTCAAGAACCACACAGAGA...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATGATACCGCCGCAGGATaGGCTTTCGGACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: CLIISPQMLPPNATRYFHDTAAG*AFGPHH
Trigger: ATGATGAGGTCCGAAAGCTCATCCTGCGGCGGTATC...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCGATACCGCCGCAGGATaGGCTTTCGGACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCDTAAG*AFGPHH
Trigger: ATGATGAGGTCCGAAAGCTCATCCTGCGGCGGTATC...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCCGCAACTTAGCCTGCTaGGTTGCCTCATTATCTCTC +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFRNLAC*VASLSL
Trigger: GAGAGATAATGAGGCAACTCAGCAGGCTAAGTTGCG...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp ACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAGAGGCTGGGGTGATCTaGGAGGGCTTCCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TFSSLRLLHSPEEPFVIAEAGVI*EGFLLV
Trigger: AACCAGAAGGAAGCCCTCTCAGATCACCCCAGCCTC...TGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCACAGAAGAACCTTTTGTaGTTGCAAGGTCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPQKNLL*LQGLKG
Trigger: CCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTG...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTACCCTGATGAGATCTaGGTTTGTTCTGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LCGTQVWHFWKLLIAFWSYPDEI*VCSAGG
Trigger: CCCACCAGCAGAACAAACTCAGATCTCATCAGGGTA...GGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATATTTCTGGAAGCTCTTaGTTGCCTTCTGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHISGSS*LPSGPA
Trigger: GGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAAT...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp GTGGGCACAATGATCGTCGGTTTGAAGGGCATTTGCCTGGAGGGAACAGCCCTGAACAGCATGGAGCTCTaGGGACTTAGTATTACAGAA +
Preference number: 4 (lower is better)
Translates to: VGTMIVGLKGICLEGTALNSMEL*GLSITE
Trigger: TTCTGTAATACTAAGTCCTCAGAGCTCCATGCTGTT...CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCGACGATCATTGTGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCTCTCCTGTAGGAACCTaGAACCAACTCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSSPVGT*NQLSSP
Trigger: TGGGCTGGAGAGTTGGTTTCAGGTTCCTACAGGAGA...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TTACCAGCCTCGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCAGGTGGTTTATGGGTCTaGCCCAATGCTTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LPASTGRQVHLFQSQALAGGLWV*PNACLL
Trigger: CAAAAGACAAGCATTGGGTCAGACCCATAAACCACC...TGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATTCCAGTGCAATGAAATaGCAGCCTTTGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHSSAMK*QPLGGG
Trigger: ACCACCTCCCAAAGGCTGTCATTTCATTGCACTGGA...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCCTTGTGGTCATCCATTaGCACCTCCTTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LCGTQVWHFWKLLIAFWSLVVIH*HLLLQL
Trigger: GAGCTGAAGAAGGAGGTGGCAATGGATGACCACAAG...GGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR GCA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAAGAAGAAACAGATATTaGGGGTCTCCAGGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPRRNRY*GSPGGS
Trigger: AGAACCCCCTGGAGACCCGCAATATCTGTTTCTTCT...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR GCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCGATGTTCTCCTGTCCTaGCTTGAAGACGGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCDVLLS*LEDGAV
Trigger: AACCGCGCCGTCTTCAAGGCAGGACAGGAGAACATC...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCAGGGACCATATCTGTaGCCAGGTCAATGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHQGPYL*PGQCKG
Trigger: TCCTTTGCATTGACCTGGGCACAGATATGGTCCCTG...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATTGGGAGTTTCGTGGCTaGCGCTTCATGATATCACTC +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHWEFRG*RFMISL
Trigger: GAGTGATATCATGAAGCGGCAGCCACGAAACTCCCA...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCTTGTTCTTCATGCCCTaGTGGAAGACTGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: PNVATQCHPLFPSLSITILFFMP*WKTELR
Trigger: CCGCAACTCAGTCTTCCAGCAGGGCATGAAGAACAA...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCGGATCTTGTTCTTCATaGCCTGCTGGAAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: LSPNVATQCHPLFPSLSIGSCSS*PAGRLS
Trigger: ACTCAGTCTTCCAGCAGGGCATGAAGAACAAGATCC...GATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACTTAGCCTGCTGAGTTaGCTCATTATCTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPLSLLS*LIISPQ
Trigger: TTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCTTCTGGTCCTGCCTCTaGTGCTACCCTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSFWSCL*CYPDEI
Trigger: GATCTCATCAGGGTAGCAGCAGAGGCAGGACCAGAA...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp GGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCATGGGCAAGGCTGCCTaGAGAGCAAAAGTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: GTQVWHFWKLLIAFWSCLMGKAA*RAKVLD
Trigger: ATCTAACACTTTTGCTCTGCAGGCAGCCTTGCCCAT...GAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCGAGAATGGGCAAGGCTaGCTGCAGAGCAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFENGQG*LQSKSV
Trigger: AACACTTTTGCTCTGCAGGCAGCCTTGCCCATTCTC...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATATGGTTCATCCTCCATaGCAGCCTGGATGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: CLIISPQMLPPNATRYFHMVHPP*QPGCRR
Trigger: CCTACGGCATCCAGGCTGCCATGGAGGATGAACCAT...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACTCGTGGATAGACAGCTaGTACTTGTTGGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNSWIDS*YLLVEL
Trigger: CAACTCTACCAACAAGTACCAGCTGTCTATCCACGA...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGAGGAAACTTTCCAGATaGCAGATTCAGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMRKLSR*QIQLTE
Trigger: TTCTGTCAACTGAATCTGCCATCTGGAAAGTTTCCT...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCAGCAAAGCTTCTCCGTaGGAAAGTTCAGCTCATCCG +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNASKASP*ESSAHP
Trigger: CGGATGAGCTGAACTTTCCCACGGAGAAGCTTTGCT...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATCATAGGCCAAGGAGATaGCAGGGACCATATCTGTGC +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYHRPRR*QGPYLC
Trigger: GCACAGATATGGTCCCTGCCATCTCCTTGGCCTATG...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATGGCTACACCCATGCCTaGGCAGTAAGAGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: CLIISPQMLPPNATRYFHGYTHA*AVREKG
Trigger: GCCTTTCTCTCTTACTGCCCAGGCATGGGTGTAGCC...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATCATAGTGGAGTGGGATaGAAAAGGATCTGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYHSGVG*KRIWSG
Trigger: CCCCGACCAGATCCTTTTCCATCCCACTCCACTATG...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACGACAACATAGTGGAGTaGGATGGAAAAGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHDNIVE*DGKGSG
Trigger: ACCAGATCCTTTTCCATCCCACTCCACTATGTTGTC...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp ACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTTCCTTCTGGTTTAGATaGGTTCCTGCTTTTGGATGC +
Preference number: 4 (lower is better)
Translates to: TKRTPNQGSAGNSVAHKCSFWFR*VPAFGC
Trigger: GCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGA...ACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCTTACCAGCCTCGACTaGGAGACAAGTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHLTSLD*ETSPPF
Trigger: AAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAAG...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCTTACCAGCCTCGACTaGGAGACAAGTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: PNVATQCHPLFPSLSITILTSLD*ETSPPF
Trigger: AAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAAG...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGTCCACGACATCTATCTaGAGACTCATGTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGSTTSI*RLMSNV
Trigger: GACATTTGACATGAGTCTCCAGATAGATGTCGTGGA...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAATGTGGCACACAAGTGTaGCATTTCTGGAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQCGTQV*HFWKLL
Trigger: CAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACA...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACTGGGAAAGAACTTGTaGCCATCCCTTTCAGAACAG +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPLGKNL*PSLSEQ
Trigger: CTGTTCTGAAAGGGATGGCCACAAGTTCTTTCCCAG...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TTACCAGCCTCGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCACTGGGAAAGAACTTGTaGCCATCCCTTTCAGAACAG +
Preference number: 4 (lower is better)
Translates to: LPASTGRQVHLFQSQALALGKNL*PSLSEQ
Trigger: CTGTTCTGAAAGGGATGGCCACAAGTTCTTTCCCAG...TGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATCCTGATTCTAGCCAATaGCCAGCGAACTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GICLEGTALPPKTSKANHPDSSQ*PANSFS
Trigger: GGAAAAGGAGTTCGCTGGCCATTGGCTAGAATCAGG...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATAAGCATACATGTCCCTaGGAGACAGGAAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GICLEGTALPPKTSKANHKHTCP*ETGRFR
Trigger: CCTGAACCTTCCTGTCTCCCAGGGACATGTATGCTT...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTTTCGCCCAGGCTaGAGTGTAATGGCACGATCT +
Preference number: 4 (lower is better)
Translates to: CLIISPQMLPPNATRYFHPFRPG*SVMARS
Trigger: AGATCGTGCCATTACACTCCAGCCTGGGCGAAAGGG...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 72 bp AGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTaGCCACCCAATGCCACCCGTTATTTCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: SLLSCLIISPQM*PPNATRYFHPS
Trigger: AGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp ACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAGACTCATGGGAATGTTaGGCCGGGCTGCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: TFSSLRLLHSPEEPFVIADSWEC*AGLQCP
Trigger: AGGACATTGCAGCCCGGCTCAACATTCCCATGAGTC...TGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACCCTGCTTTTGGATGCTaGTCTATTACAGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHPAFGC*SITVGS
Trigger: ACTTCCTACTGTAATAGATCAGCATCCAAAAGCAGG...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCATTTCTGGAAGCTCTTaGTTGCCTTCTGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSISGSS*LPSGPA
Trigger: GGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAAT...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCGTGTTATTAAGTACATaGGTGACATCCGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFVLLST*VTSGPC
Trigger: ACAAGGTCCGGATGTCACTCATGTACTTAATAACAC...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCAGAAGAAACAGATATTaGGGGTCTCCAGGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LCGTQVWHFWKLLIAFWSRRNRY*GSPGGS
Trigger: AGAACCCCCTGGAGACCCGCAATATCTGTTTCTTCT...GGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR GCA 90 bp CTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTGATCTAAAAGGATGGTCACAGTaGCCAGAGGTAGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: LRGLPSGLDGFLLLDADLKGWSQ*PEVGGC
Trigger: ACATCCCCCTACCTCTGGGCACTGTGACCATCCTTT...TAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAAAAAGGATGGTCACAGTaGCCAGAGGTAGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: RLLHSPEEPFVIARSEGEKGWSQ*PEVGGC
Trigger: ACATCCCCCTACCTCTGGGCACTGTGACCATCCTTT...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCTGGGAGTTTCGTGGCTaGCGCTTCATGATATCACTC +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSWEFRG*RFMISL
Trigger: GAGTGATATCATGAAGCGGCAGCCACGAAACTCCCA...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCGAGAATGGGCAAGGCTaGCTGCAGAGCAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LIISPQMLPPNATRYFHPENGQG*LQSKSV
Trigger: AACACTTTTGCTCTGCAGGCAGCCTTGCCCATTCTC...GGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTGCTTCCTTCCTGTCTaGCTTAGGTCTTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: LLSCLIISPQMLPPNATRCFLPV*LRSSIF
Trigger: GAAAATGGAAGACCTAAGGCAGACAGGAAGGAAGCA...ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACGATATAGATTGTCGTTaGATGGTTCATCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNDIDCR*MVHPPW
Trigger: CCATGGAGGATGAACCATCCAACGACAATCTATATC...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp TCCCAGGCCCAAGGCAATGACTCCCTTACTTCCTTGCTTCTGATAAAGCAAAATTTCATCACCAGCACGTaGCTCTGGGGGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQAQGNDSLTSLLLIKQNFITST*LWGLSS
Trigger: AGAAGACAGCCCCCAGAGCCACGTGCTGGTGATGAA...ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACATCACAGTTAGGTCTATaGGGTCATCACCCCAATTTA +
Preference number: 4 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTSQLGL*GHHPNL
Trigger: TAAATTGGGGTGATGACCCCATAGACCTAACTGTGA...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTGACAACATAGTGGAGTaGGATGGAAAAGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: LLSCLIISPQMLPPNATRDNIVE*DGKGSG
Trigger: ACCAGATCCTTTTCCATCCCACTCCACTATGTTGTC...ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCGGGTATTCTAAAATGTaGGACGTAGAGCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LCGTQVWHFWKLLIAFWSGYSKM*DVELES
Trigger: GGACTCCAGCTCTACGTCCCACATTTTAGAATACCC...GGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCCAAGTGTGGCATTTCTaGAAGCTCTTGATTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NVATQCHPLFPSLSITIPQVWHF*KLLIAF
Trigger: GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTG...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATTTTCCAGGGTTGGCTTaGCAGTGTCGGGGAATGATG +
Preference number: 4 (lower is better)
Translates to: CLIISPQMLPPNATRYFHFPGLA*QCRGMM
Trigger: CATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp ACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCACTCCTTTTCCAGGGTTaGCTTGGCAGTGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: TFSSLRLLHSPEEPFVIALLFQG*LGSVGE
Trigger: TTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAG...TGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 72 bp TTGTCCAAAGGTTCTGACCATGTTCATGACCTAAGCTaGTCCCTGGAAGCATACATGTCCCTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: LSKGSDHVHDLS*SLEAYMSLGDR
Trigger: CCTGTCTCCCAGGGACATGTATGCTTCCAGGGACAAGCTTAGGTCATGAACATGGTCAGAACCTTTGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATGTGTTCAATCTCCATTaGTATGGGTGTCCGCCCAAC +
Preference number: 4 (lower is better)
Translates to: CLIISPQMLPPNATRYFHVFNLH*YGCPPN
Trigger: GTTGGGCGGACACCCATAGCAATGGAGATTGAACAC...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR GCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCGGATCTTGTTCTTCATaGCCTGCTGGAAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSGSCSS*PAGRLS
Trigger: ACTCAGTCTTCCAGCAGGGCATGAAGAACAAGATCC...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCAATGTTGCCACCCAATaGCACCCGTTATTTCCATCC +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSNVATQ*HPLFPS
Trigger: GGATGGAAATAACGGGTGGCATTGGGTGGCAACATT...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATCTTAGCCTGCTGAGTTaGCTCATTATCTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYLSLLS*LIISPQ
Trigger: TTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR GCA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCTGCTTCCTTCCTGTCTaGCTTAGGTCTTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: LSLLSCLIISPQMLPPNACFLPV*LRSSIF
Trigger: GAAAATGGAAGACCTAAGGCAGACAGGAAGGAAGCA...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAAAATGCTTGTCTTTTGTaGTTCCTTCCTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RLGDKSTFSSLRLLHSPENACLL*FLPVCL
Trigger: AAGGCAGACAGGAAGGAAGCACAAAAGACAAGCATT...TTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TTACCAGCCTCGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCAAATGCTTGTCTTTTGTaGTTCCTTCCTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPASTGRQVHLFQSQALANACLL*FLPVCL
Trigger: AAGGCAGACAGGAAGGAAGCACAAAAGACAAGCATT...TGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATATCGTTTGTCAAAAGTaGCCCCAGACTGATCTTCGG +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYIVCQK*PQTDLR
Trigger: CCGAAGATCAGTCTGGGGCCACTTTTGACAAACGAT...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAACTGTCTTCTCGCTCGTaGATAGACAGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RLLHSPEEPFVIARSEGELSSRS*IDSWYL
Trigger: CAAGTACCAGCTGTCTATCCACGAGCGAGAAGACAG...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACAGGAAACTTTCCAGATaGCAGATTCAGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHRKLSR*QIQLTE
Trigger: TTCTGTCAACTGAATCTGCCATCTGGAAAGTTTCCT...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp TCCCAGGCCCAAGGCAATGACTCCCTTACTTCCTTGCTTCTGATAAAGCAAAATCATAGGCCAAGGAGATaGCAGGGACCATATCTGTGC +
Preference number: 4 (lower is better)
Translates to: SQAQGNDSLTSLLLIKQNHRPRR*QGPYLC
Trigger: GCACAGATATGGTCCCTGCCATCTCCTTGGCCTATG...ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp AATGACAGCCTTTGGGAGGTGGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTCCTCCAGATCATTCATaGTCCGGTCATCCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: NDSLWEVVYGSDPMLVFCPPDHS*SGHPSR
Trigger: TCGACTGGGATGACCGGACCATGAATGATCTGGAGG...ACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCATGGGTTCCTGCTTTTaGATGCTGATCTATTACAGT +
Preference number: 4 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSMGSCF*MLIYYS
Trigger: ACTGTAATAGATCAGCATCCAAAAGCAGGAACCCAT...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCAAGTTTGTTCTGCTGGTaGGGTATTCTAAAATGTGGG +
Preference number: 4 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPSLFCW*GILKCG
Trigger: CCCACATTTTAGAATACCCCACCAGCAGAACAAACT...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAAGGGAATGGAAGAGGCTaGGAAAGAACTTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RLLHSPEEPFVIARSEGEGNGRG*ERTCGH
Trigger: ATGGCCACAAGTTCTTTCCCAGCCTCTTCCATTCCC...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCCATCCGTGTCGAATTTaGAGCCCCGAGGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIIHPCRI*SPEETF
Trigger: GAAAGTTTCCTCGGGGCTTCAAATTCGACACGGATG...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR TCA 90 bp TTTTTCCTCTTGTCCAAAGGTTCTGACCATGTTCATGACCTAAGCTTGTCCCTGCGTTACCCTCTGATATaGTGCCCACGCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: FFLLSKGSDHVHDLSLSLRYPLI*CPRLWQ
Trigger: TTGCCAAAGGCGTGGGCATCATATCAGAGGGTAACG...CAGGGACAAGCTTAGGTCATGAACATGGTCAGAACCTTTGGACAAGAGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATGTGTTATTAAGTACATaGGTGACATCCGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHVLLST*VTSGPC
Trigger: ACAAGGTCCGGATGTCACTCATGTACTTAATAACAC...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCAACAGCATGGAGCTCTaGGGACTTAGTATTACAGAA +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFNSMEL*GLSITE
Trigger: TTCTGTAATACTAAGTCCTCAGAGCTCCATGCTGTT...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCGATCTGAGTTTGTTCTaGTGGTGGGGTATTCTAAAA +
Preference number: 4 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCDLSLF*WWGILK
Trigger: TTTTAGAATACCCCACCAGCAGAACAAACTCAGATC...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATGATGTCTTTCTCACTTaGATGACCTATCTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHDVFLT*MTYLGL
Trigger: GAGACCTAGATAGGTCATGCAAGTGAGAAAGACATC...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAAATCGTTTGTCAAAAGTaGCCCCAGACTGATCTTCGG +
Preference number: 4 (lower is better)
Translates to: RLLHSPEEPFVIARSEGEIVCQK*PQTDLR
Trigger: CCGAAGATCAGTCTGGGGCCACTTTTGACAAACGAT...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCGTGGATAGACAGCTaGTACTTGTTGGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LIISPQMLPPNATRYFHPSWIDS*YLLVEL
Trigger: CAACTCTACCAACAAGTACCAGCTGTCTATCCACGA...GGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTCACAGTTAGGTCTATaGGGTCATCACCCCAATTTA +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFSQLGL*GHHPNL
Trigger: TAAATTGGGGTGATGACCCCATAGACCTAACTGTGA...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTCCTTCTGGTTTAGATaGGTTCCTGCTTTTGGATGC +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYSFWFR*VPAFGC
Trigger: GCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGA...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATAGTTTGTTCTGCTGGTaGGGTATTCTAAAATGTGGG +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHSLFCW*GILKCG
Trigger: CCCACATTTTAGAATACCCCACCAGCAGAACAAACT...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAATGTGGCACACAAGTGTaGCATTTCTGGAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RLLHSPEEPFVIARSEGECGTQV*HFWKLL
Trigger: CAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACA...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp AATGACAGCCTTTGGGAGGTGGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTGGATCTTGTTCTTCATaGCCTGCTGGAAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: NDSLWEVVYGSDPMLVFCGSCSS*PAGRLS
Trigger: ACTCAGTCTTCCAGCAGGGCATGAAGAACAAGATCC...ACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp AATGACAGCCTTTGGGAGGTGGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTCTTAGCCTGCTGAGTTaGCTCATTATCTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: NDSLWEVVYGSDPMLVFCLSLLS*LIISPQ
Trigger: TTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG...ACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCATGGGTCTGACCCAATaGTTGTCTTTTGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCMGLTQ*LSFVLP
Trigger: AGGAAGCACAAAAGACAAGCATTGGGTCAGACCCAT...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATTGCCTTCAACACAGTTaGTGGAGAAGAAACAGATAT +
Preference number: 4 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHCLQHS*WRRNRY
Trigger: ATATCTGTTTCTTCTCCACCAACTGTGTTGAAGGCA...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CCA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATATGGGTTCCTGCTTTTaGATGCTGATCTATTACAGT +
Preference number: 4 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHMGSCF*MLIYYS
Trigger: ACTGTAATAGATCAGCATCCAAAAGCAGGAACCCAT...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCAAATGTCCTGTCATTaGCACTACCTCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSQMSCH*HYLTSF
Trigger: AAAGGAAGTGAGGTAGTGCCAATGACAGGACATTTG...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAACAAGTGTGGCATTTCTaGAAGCTCTTGATTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RLLHSPEEPFVIARSEGEQVWHF*KLLIAF
Trigger: GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTG...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATGATCTGAGTTTGTTCTaGTGGTGGGGTATTCTAAAA +
Preference number: 4 (lower is better)
Translates to: LSCLIISPQMLPPNATRYDLSLF*WWGILK
Trigger: TTTTAGAATACCCCACCAGCAGAACAAACTCAGATC...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATGATGTCTTTCTCACTTaGATGACCTATCTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: CLIISPQMLPPNATRYFHDVFLT*MTYLGL
Trigger: GAGACCTAGATAGGTCATGCAAGTGAGAAAGACATC...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp TCCCAGGCCCAAGGCAATGACTCCCTTACTTCCTTGCTTCTGATAAAGCAAAATATGGGTCTGACCCAATaGTTGTCTTTTGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SQAQGNDSLTSLLLIKQNMGLTQ*LSFVLP
Trigger: AGGAAGCACAAAAGACAAGCATTGGGTCAGACCCAT...ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCAAAGCAAAATTCCAGTaGAATGAAATGACAGCCTTT +
Preference number: 4 (lower is better)
Translates to: NVATQCHPLFPSLSITIPKAKFQ*NEMTAF
Trigger: AAAGGCTGTCATTTCATTGCACTGGAATTTTGCTTT...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCGATATAGATTGTCGTTaGATGGTTCATCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCDIDCR*MVHPPW
Trigger: CCATGGAGGATGAACCATCCAACGACAATCTATATC...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CCA 90 bp TTTTTCCTCTTGTCCAAAGGTTCTGACCATGTTCATGACCTAAGCTTGTCCCTGATCGTTTGTCAAAAGTaGCCCCAGACTGATCTTCGG +
Preference number: 4 (lower is better)
Translates to: FFLLSKGSDHVHDLSLSLIVCQK*PQTDLR
Trigger: CCGAAGATCAGTCTGGGGCCACTTTTGACAAACGAT...CAGGGACAAGCTTAGGTCATGAACATGGTCAGAACCTTTGGACAAGAGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCTCGTGGATAGACAGCTaGTACTTGTTGGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIISWIDS*YLLVEL
Trigger: CAACTCTACCAACAAGTACCAGCTGTCTATCCACGA...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTGATCTATCACAGTTAGGTCTATaGGGTCATCACCCCAATTTA +
Preference number: 4 (lower is better)
Translates to: LRGLPSGLDGFLLLDADLSQLGL*GHHPNL
Trigger: TAAATTGGGGTGATGACCCCATAGACCTAACTGTGA...TAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTGATCTACAAATGTCCTGTCATTaGCACTACCTCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LRGLPSGLDGFLLLDADLQMSCH*HYLTSF
Trigger: AAAGGAAGTGAGGTAGTGCCAATGACAGGACATTTG...TAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAATCCACGACATCTATCTaGAGACTCATGTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: RLLHSPEEPFVIARSEGESTTSI*RLMSNV
Trigger: GACATTTGACATGAGTCTCCAGATAGATGTCGTGGA...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR TCA 90 bp TCCCAGGCCCAAGGCAATGACTCCCTTACTTCCTTGCTTCTGATAAAGCAAAATCCTGCTTTTGGATGCTaGTCTATTACAGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SQAQGNDSLTSLLLIKQNPAFGC*SITVGS
Trigger: ACTTCCTACTGTAATAGATCAGCATCCAAAAGCAGG...ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR GCA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCAAAGCAAAATTCCAGTaGAATGAAATGACAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFKAKFQ*NEMTAF
Trigger: AAAGGCTGTCATTTCATTGCACTGGAATTTTGCTTT...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CCA 90 bp CTTTCTCACTTGCATGACCTATCTAGGTCTCTCTCTACAGGACATTCCCAGTGCTGCCTTCAACACAGTTaGTGGAGAAGAAACAGATAT +
Preference number: 4 (lower is better)
Translates to: LSHLHDLSRSLSTGHSQCCLQHS*WRRNRY
Trigger: ATATCTGTTTCTTCTCCACCAACTGTGTTGAAGGCA...GCACTGGGAATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CCA 90 bp CTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTGATCTAAGGAAACTTTCCAGATaGCAGATTCAGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: LRGLPSGLDGFLLLDADLRKLSR*QIQLTE
Trigger: TTCTGTCAACTGAATCTGCCATCTGGAAAGTTTCCT...TAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
3UTR CAA 72 bp CTTAGGTCTTCCATTTTCCTCAGATGTCTTTCTCACTaGCATGACCTATCTAGGTCTCTCTCTACAGGACAT +
Preference number: 4 (lower is better)
Translates to: LRSSIFLRCLSH*HDLSRSLSTGH
Trigger: ATGTCCTGTAGAGAGAGACCTAGATAGGTCATGCAAGTGAGAAAGACATCTGAGGAAAATGGAAGACCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGGGTGGTGTGAGGGCGTaGGGCCCATCTCGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMGGVRA*GPSRAR
Trigger: TCTGGCTCGAGATGGGCCCAACGCCCTCACACCACC...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS TCA 90 bp GTGTTCAATCTCCATTGCTATGGGTGTCCGCCCAACCTCCAGGCCTaGGGCGAGAGTAGCTATGCGGCCCATCACCGTCCGGTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: VFNLHCYGCPPNLQA*GESSYAAHHRPVSC
Trigger: ACAGGAGACCGGACGGTGATGGGCCGCATAGCTACTCTCGCCTCAGGCCTGGAGGTTGGGCGGACACCCATAGCAATGGAGATTGAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000472488.5
CDS-3UTR CAA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACATCGAGCGGGATCTCCTaGCCCTGCACCAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTSSGIS*PCTRMV
Trigger: CACCATCCTGGTGCAGGGCAAGGAGATCCCGCTCGA...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp GGACCTTGTGGACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGAGGTCCACTTGGTATTaGCGGCCCAGCTCATCCAAG +
Preference number: 5 (lower is better)
Translates to: GPCGLRGPLTKGQRGTLWRSTWY*RPSSSK
Trigger: CTTGGATGAGCTGGGCCGCAAATACCAAGTGGACCT...CCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGTCCACAAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CAA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGTTGAAGACGGCGCGGTaGCAGAGACCAGCAATTCGA +
Preference number: 5 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMLKTAR*QRPAIR
Trigger: TCGAATTGCTGGTCTCTGCAACCGCGCCGTCTTCAA...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp GGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCTCGAGCGGGATCTCCTaGCCCTGCACCAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: GTQVWHFWKLLIAFWSCLSSGIS*PCTRMV
Trigger: CACCATCCTGGTGCAGGGCAAGGAGATCCCGCTCGA...GAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACCTGCGCTTCGGCACTaGCCCACAGCATCTGGCACA +
Preference number: 5 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPPALRH*PTASGT
Trigger: TGTGCCAGATGCTGTGGGCAAGTGCCGAAGCGCAGG...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACCAGGGTTTCACCATGTaGGCCAGGCTCGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNQGFTM*ARLASN
Trigger: GTTCGAGGCGAGCCTGGCCAACATGGTGAAACCCTG...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CATCACCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTCTTGGACAGGTCCACTaGGTATTTGCGGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: HHHPHNTSRAPHLSMPGSLGQVH*VFAAQL
Trigger: GAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAAG...AGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCGGTGGTGTGAGGGCGTaGGGCCCATCTCGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSGGVRA*GPSRAR
Trigger: TCTGGCTCGAGATGGGCCCAACGCCCTCACACCACC...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp TTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATGCAGGTTCATCGGGATGGGTTGAAGACGGCGCGGTaGCAGAGACCAGCAATTCGA +
Preference number: 5 (lower is better)
Translates to: FPGLAWQCRGMMQVHRDGLKTAR*QRPAIR
Trigger: TCGAATTGCTGGTCTCTGCAACCGCGCCGTCTTCAA...CCCATCCCGATGAACCTGCATCATTCCCCGACACTGCCAAGCCAACCCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATTCGAGCGGGATCTCCTaGCCCTGCACCAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHSSGIS*PCTRMV
Trigger: CACCATCCTGGTGCAGGGCAAGGAGATCCCGCTCGA...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCTGCGCTTCGGCACTaGCCCACAGCATCTGGCACA +
Preference number: 5 (lower is better)
Translates to: PNVATQCHPLFPSLSITIPALRH*PTASGT
Trigger: TGTGCCAGATGCTGTGGGCAAGTGCCGAAGCGCAGG...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACATGCACCACGCATGCCTaGGCTTCTCTGGGGTTGACT +
Preference number: 5 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTCTTHA*ASLGLT
Trigger: AGTCAACCCCAGAGAAGCCAAGGCATGCGTGGTGCA...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp GTGGGCACAATGATCGTCGGTTTGAAGGGCATTTGCCTGGAGGGAACAGCCCTGATCTCTCCCCAAATGTaGCCACCCAATGCCACCCGT +
Preference number: 5 (lower is better)
Translates to: VGTMIVGLKGICLEGTALISPQM*PPNATR
Trigger: ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGAT...CAGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCGACGATCATTGTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS CCA 90 bp TGGACAGAACAGAGATCTCCCTGGGGAAGGGAGATACATTTCCCATaGAGTCAGGCTGCCCTCAGTCAATACCCTGCTCTGTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: WTEQRSPWGREIHFP*SQAALSQYPALWRV
Trigger: CACCCTCCACAGAGCAGGGTATTGACTGAGGGCAGCCTGACTCCATGGGAAATGTATCTCCCTTCCCCAGGGAGATCTCTGTTCTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS-3UTR CAA 90 bp GGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCCTTGGACAGGTCCACTaGGTATTTGCGGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GTQVWHFWKLLIAFWSCLLGQVH*VFAAQL
Trigger: GAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAAG...GAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CAA 90 bp CCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACTGGTTGGTGAGGCCCTaGGACAGGTCCACTTGGTAT +
Preference number: 5 (lower is better)
Translates to: PPNATRYFHPSPSPSPQHWLVRP*DRSTWY
Trigger: ATACCAAGTGGACCTGTCCAAGGGCCTCACCAACCA...GTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACATTGAAGACGGCGCGGTaGCAGAGACCAGCAATTCGA +
Preference number: 5 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTLKTAR*QRPAIR
Trigger: TCGAATTGCTGGTCTCTGCAACCGCGCCGTCTTCAA...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAATGCACCACGCATGCCTaGGCTTCTCTGGGGTTGACT +
Preference number: 5 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQCTTHA*ASLGLT
Trigger: AGTCAACCCCAGAGAAGCCAAGGCATGCGTGGTGCA...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGATCTCTGTGTGGTTCTaGAGGATCTCATCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMISVWF*RISSSC
Trigger: GCAGCTCGATGAGATCCTCAAGAACCACACAGAGAT...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCAACCACCAGGTGACTTaGAGCGGGTACATGCGGAGG +
Preference number: 5 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCNHQVT*SGYMRR
Trigger: CCTCCGCATGTACCCGCTCAAAGTCACCTGGTGGTT...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCAGTGACATCCGGACCTaGTGGACTAAGAGGACCCCT +
Preference number: 5 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFSDIRT*WTKRTP
Trigger: AGGGGTCCTCTTAGTCCACAAGGTCCGGATGTCACT...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCAGGGTTTCACCATGTaGGCCAGGCTCGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHQGFTM*ARLASN
Trigger: GTTCGAGGCGAGCCTGGCCAACATGGTGAAACCCTG...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACGGTTTGAAGGGCATTaGCCTGGAGGGAACAGCCCT +
Preference number: 5 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPRFEGH*PGGNSP
Trigger: AGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCG...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp TTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAATCCTTCTGTTTCTTCTaGCCGCCCCCATTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LPPNATRYFHPSPSPSPQSFCFF*PPPFSA
Trigger: GGCAGAGAATGGGGGCGGCAAGAAGAAACAGAAGGA...TTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCAGGTCCACTTGGTATTaGCGGCCCAGCTCATCCAAG +
Preference number: 5 (lower is better)
Translates to: NVATQCHPLFPSLSITIPRSTWY*RPSSSK
Trigger: CTTGGATGAGCTGGGCCGCAAATACCAAGTGGACCT...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAGTTACCATGATCACCTaGATGCCTGCGCTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPVTMIT*MPALRH
Trigger: GTGCCGAAGCGCAGGCATCAAGGTGATCATGGTAAC...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCGTTACCATGATCACCTaGATGCCTGCGCTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: NVATQCHPLFPSLSITIPVTMIT*MPALRH
Trigger: GTGCCGAAGCGCAGGCATCAAGGTGATCATGGTAAC...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATTGCACCACGCATGCCTaGGCTTCTCTGGGGTTGACT +
Preference number: 5 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHCTTHA*ASLGLT
Trigger: AGTCAACCCCAGAGAAGCCAAGGCATGCGTGGTGCA...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCCTCTCATTCACCAGCTaGTCCGTCTGGGAGTTTCGT +
Preference number: 5 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFLSFTS*SVWEFR
Trigger: ACGAAACTCCCAGACGGACAAGCTGGTGAATGAGAG...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CATCACCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTCTCTCATTCACCAGCTaGTCCGTCTGGGAGTTTCGT +
Preference number: 5 (lower is better)
Translates to: HHHPHNTSRAPHLSMPGSLSFTS*SVWEFR
Trigger: ACGAAACTCCCAGACGGACAAGCTGGTGAATGAGAG...AGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCAATCTCTCCCCAAATGTaGCCACCCAATGCCACCCGT +
Preference number: 5 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPISPQM*PPNATR
Trigger: ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGAT...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp GCCAATGGCCAGCGAACTCCTTTTCCAGGGTTGGCTTGGCAGTGTCGGGGAATGGTTCATGACCTAAGCTaGTCCCTGGAAGCATACATG +
Preference number: 5 (lower is better)
Translates to: ANGQRTPFPGLAWQCRGMVHDLS*SLEAYM
Trigger: CATGTATGCTTCCAGGGACAAGCTTAGGTCATGAAC...CATTCCCCGACACTGCCAAGCCAACCCTGGAAAAGGAGTTCGCTGGCCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATCGGTTTGAAGGGCATTaGCCTGGAGGGAACAGCCCT +
Preference number: 5 (lower is better)
Translates to: GICLEGTALPPKTSKANHRFEGH*PGGNSP
Trigger: AGGGCTGTTCCCTCCAGGCAAATGCCCTTCAAACCG...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCATGAAGATGAGGAGGTaGAGCGGGTACATGCGGAGG +
Preference number: 5 (lower is better)
Translates to: LSPNVATQCHPLFPSLSIMKMRR*SGYMRR
Trigger: CCTCCGCATGTACCCGCTCAACCTCCTCATCTTCAT...GATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392233.7
CDS-3UTR CAA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATTCCTTCTGTTTCTTCTaGCCGCCCCCATTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHSFCFF*PPPFSA
Trigger: GGCAGAGAATGGGGGCGGCAAGAAGAAACAGAAGGA...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCGCTTGTGGTCATCCATaGCCACCTCCTTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCACGHP*PPPSSA
Trigger: AGCTGAAGAAGGAGGTGGCAATGGATGACCACAAGC...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CAA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAGCTTGTGGTCATCCATaGCCACCTCCTTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPACGHP*PPPSSA
Trigger: AGCTGAAGAAGGAGGTGGCAATGGATGACCACAAGC...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATTGGTTGGTGAGGCCCTaGGACAGGTCCACTTGGTAT +
Preference number: 5 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHWLVRP*DRSTWY
Trigger: ATACCAAGTGGACCTGTCCAAGGGCCTCACCAACCA...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACCGGATCACAAGGGCTaGCTGAGGTACCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPPDHKG*LRYHVL
Trigger: AAGAACATGGTACCTCAGCAAGCCCTTGTGATCCGG...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCGAGAGCTCAATGCACTaGAGCAGAGCTGACTCAGAG +
Preference number: 5 (lower is better)
Translates to: NVATQCHPLFPSLSITIPESSMH*SRADSE
Trigger: CTCTGAGTCAGCTCTGCTCAAGTGCATTGAGCTCTC...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCGCATCTTGCATCTCCTaGTCGAGCGGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PNVATQCHPLFPSLSITIASCIS*SSGISL
Trigger: CAAGGAGATCCCGCTCGACAAGGAGATGCAAGATGC...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACATCTCTGTGTGGTTCTaGAGGATCTCATCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHISVWF*RISSSC
Trigger: GCAGCTCGATGAGATCCTCAAGAACCACACAGAGAT...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCATCTCTGTGTGGTTCTaGAGGATCTCATCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFISVWF*RISSSC
Trigger: GCAGCTCGATGAGATCCTCAAGAACCACACAGAGAT...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAACTCTCATTCACCAGCTaGTCCGTCTGGGAGTTTCGT +
Preference number: 5 (lower is better)
Translates to: LTKGQRGTLWHTSVAFLELSFTS*SVWEFR
Trigger: ACGAAACTCCCAGACGGACAAGCTGGTGAATGAGAG...TTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCTCCAGTCTCAGGCTCTaGCACTCACCAGAAGAACCT +
Preference number: 5 (lower is better)
Translates to: LSPNVATQCHPLFPSLSISSLRL*HSPEEP
Trigger: AGGTTCTTCTGGTGAGTGCAAGAGCCTGAGACTGGA...GATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CATCACCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTCATTTCTGGAAGCTCTaGATTGCCTTCTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: HHHPHNTSRAPHLSMPGSHFWKL*IAFWSC
Trigger: GCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATG...AGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCAGTGACATCCGGACCTaGTGGACTAAGAGGACCCCT +
Preference number: 5 (lower is better)
Translates to: LCGTQVWHFWKLLIAFWSSDIRT*WTKRTP
Trigger: AGGGGTCCTCTTAGTCCACAAGGTCCGGATGTCACT...GGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp ACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGCACACAAGTGTACAATGATCGTCGGTTaGAAGGGCATTTGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TKRTPNQGSAGNSVAHKCTMIVG*KGICLE
Trigger: CTCCAGGCAAATGCCCTTCAAACCGACGATCATTGT...ACACTTGTGTGCCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACCTCCACAATGATCGTCGGTTaGAAGGGCATTTGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PMPPVISIPLHHHPHNTSTMIVG*KGICLE
Trigger: CTCCAGGCAAATGCCCTTCAAACCGACGATCATTGT...GGAGGTGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS GCA 90 bp GAGATCTCCCTGGGGAAGGGAGATACATTTCCCATGGAGTCAGGCTaGCCTCAGTCAATACCCTGCTCTGTGGAGGGTGTTTCCATAATA +
Preference number: 5 (lower is better)
Translates to: EISLGKGDTFPMESG*PQSIPCSVEGVSII
Trigger: TATTATGGAAACACCCTCCACAGAGCAGGGTATTGACTGAGGGCAGCCTGACTCCATGGGAAATGTATCTCCCTTCCCCAGGGAGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS CCA 90 bp TTTGAAATCCACTCAGTCTTGGGGTGGACAGAACAGAGATCTCCCTaGGGAAGGGAGATACATTTCCCATGGAGTCAGGCTGCCCTCAGT +
Preference number: 5 (lower is better)
Translates to: FEIHSVLGWTEQRSP*GREIHFPWSQAALS
Trigger: ACTGAGGGCAGCCTGACTCCATGGGAAATGTATCTCCCTTCCCCAGGGAGATCTCTGTTCTGTCCACCCCAAGACTGAGTGGATTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS-3UTR CAA 90 bp GGACCTTGTGGACTAAGAGGACCCCTAACCAAGGGTCAGCGGGGAACTCTGTGGATAGACAGCTGGTACTaGTTGGTAGAGTTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: GPCGLRGPLTKGQRGTLWIDSWY*LVELKG
Trigger: TCCTTTCAACTCTACCAACAAGTACCAGCTGTCTAT...CCACAGAGTTCCCCGCTGACCCTTGGTTAGGGGTCCTCTTAGTCCACAAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCGCATCTTGCATCTCCTaGTCGAGCGGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSASCIS*SSGISL
Trigger: CAAGGAGATCCCGCTCGACAAGGAGATGCAAGATGC...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp TTACCAGCCTCGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCAAGATGGCAGATTCAGTaGACAGAATCCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: LPASTGRQVHLFQSQALARWQIQ*TESQHT
Trigger: CGTGTGCTGGGATTCTGTCAACTGAATCTGCCATCT...TGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCGAGGCTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAAGATGGCAGATTCAGTaGACAGAATCCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPRWQIQ*TESQHT
Trigger: CGTGTGCTGGGATTCTGTCAACTGAATCTGCCATCT...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACTCATCCGTGTCGAATTaGAAGCCCCGAGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHSSVSN*KPRGNF
Trigger: AAAGTTTCCTCGGGGCTTCAAATTCGACACGGATGA...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CCATCCCCACAACACCTCCAGAGCTCCCCATCTTTCCATGCCTGGTTCTTCTTCCCAAAAATCAGGATCTaGTTCTTCATGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PSPQHLQSSPSFHAWFFFPKIRI*FFMPCW
Trigger: CCAGCAGGGCATGAAGAACAAGATCCTGATTTTTGG...GAAGAAGAACCAGGCATGGAAAGATGGGGAGCTCTGGAGGTGTTGTGGGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTGATCTAAACCACCAGGTGACTTaGAGCGGGTACATGCGGAGG +
Preference number: 5 (lower is better)
Translates to: LRGLPSGLDGFLLLDADLNHQVT*SGYMRR
Trigger: CCTCCGCATGTACCCGCTCAAAGTCACCTGGTGGTT...TAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACACTACCTCACTTCCTTaGTTGTTTCCTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNTTSLP*LFPSSS
Trigger: GCTGGAGGAAGGAAACAACAAAGGAAGTGAGGTAGT...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCGGTCTGACCCAATGCTaGTCTTTTGTGCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: NVATQCHPLFPSLSITIPGLTQC*SFVLPS
Trigger: GGAAGGAAGCACAAAAGACAAGCATTGGGTCAGACC...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS TCA 90 bp ATGGCAGAGCTTTTGCCAGGTAAGTACTACCAGAGCCCTTCATCCTaGCTATGGATTCAGGATTCAGACTCTTTCCTACAGGGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: MAELLPGKYYQSPSS*LWIQDSDSFLQGAA
Trigger: GGCTGCCCCCTGTAGGAAAGAGTCTGAATCCTGAATCCATAGTCAGGATGAAGGGCTCTGGTAGTACTTACCTGGCAAAAGCTCTGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS-3UTR CAA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCTCATCCAAGGACAGCTaGTGGTCATCCATTGCCACC +
Preference number: 5 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSSSKDS*WSSIAT
Trigger: GGTGGCAATGGATGACCACAAGCTGTCCTTGGATGA...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATAGTGTTCAATCTCCATaGCTATGGGTGTCCGCCCAA +
Preference number: 5 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHSVQSP*LWVSAQ
Trigger: TTGGGCGGACACCCATAGCAATGGAGATTGAACACT...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATGAGAGCTCAATGCACTaGAGCAGAGCTGACTCAGAG +
Preference number: 5 (lower is better)
Translates to: LSCLIISPQMLPPNATRYESSMH*SRADSE
Trigger: CTCTGAGTCAGCTCTGCTCAAGTGCATTGAGCTCTC...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTGATCTAGCATCTTGCATCTCCTaGTCGAGCGGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LRGLPSGLDGFLLLDADLASCIS*SSGISL
Trigger: CAAGGAGATCCCGCTCGACAAGGAGATGCAAGATGC...TAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCATCATCCGTGTCGAATTaGAAGCCCCGAGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPSSVSN*KPRGNF
Trigger: AAAGTTTCCTCGGGGCTTCAAATTCGACACGGATGA...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp TGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACTCAAATGTCCTGTCATaGGCACTACCTCACTTCCTT +
Preference number: 5 (lower is better)
Translates to: CHPMPPVISIPLHHHPHNSNVLS*ALPHFL
Trigger: AAGGAAGTGAGGTAGTGCCAATGACAGGACATTTGA...GTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp GGCATTTGCCTGGAGGGAACAGCCCTGCCACCTAAGACGTCAAAAGCAAATCATAGGCTGGGAAAGAACTaGTGGCCATCCCTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: GICLEGTALPPKTSKANHRLGKN*WPSLSE
Trigger: TTCTGAAAGGGATGGCCACAAGTTCTTTCCCAGCCT...ATGATTTGCTTTTGACGTCTTAGGTGGCAGGGCTGTTCCCTCCAGGCAAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATAGGCTGGGAAAGAACTaGTGGCCATCCCTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHRLGKN*WPSLSE
Trigger: TTCTGAAAGGGATGGCCACAAGTTCTTTCCCAGCCT...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp GGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCTGGTCCTGCCTCGTTCATGACCTAAGCTaGTCCCTGGAAGCATACATG +
Preference number: 5 (lower is better)
Translates to: GTQVWHFWKLLIAFWSCLVHDLS*SLEAYM
Trigger: CATGTATGCTTCCAGGGACAAGCTTAGGTCATGAAC...GAGGCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp GGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCCTTCGGTCTGACCCAATGCTaGTCTTTTGTGCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: GELCGTQVWHFWKLLIAFGLTQC*SFVLPS
Trigger: GGAAGGAAGCACAAAAGACAAGCATTGGGTCAGACC...GAAGGCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CGACTGGGAGACAAGTCCACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAAACACCCAGATATAGATaGTCGTTGGATGGTTCATCC +
Preference number: 5 (lower is better)
Translates to: RLGDKSTFSSLRLLHSPETPRYR*SLDGSS
Trigger: GGATGAACCATCCAACGACAATCTATATCTGGGTGT...TTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGTGGACTTGTCTCCCAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CAA 90 bp AATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCGTGCCTTCAACACAGTaGGTGGAGAAGAAACAGATA +
Preference number: 5 (lower is better)
Translates to: NVATQCHPLFPSLSITIPVPSTQ*VEKKQI
Trigger: TATCTGTTTCTTCTCCACCAACTGTGTTGAAGGCAC...GGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCATTTTGAAAGGCATCTaGCATCTCCTTGTCGAGCGG +
Preference number: 5 (lower is better)
Translates to: PNVATQCHPLFPSLSITIILKGI*HLLVER
Trigger: CCGCTCGACAAGGAGATGCAAGATGCCTTTCAAAAT...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCATTTTGAAAGGCATCTaGCATCTCCTTGTCGAGCGG +
Preference number: 5 (lower is better)
Translates to: LSLLSCLIISPQMLPPNAILKGI*HLLVER
Trigger: CCGCTCGACAAGGAGATGCAAGATGCCTTTCAAAAT...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp TCCCAGGCCCAAGGCAATGACTCCCTTACTTCCTTGCTTCTGATAAAGCAAAATGTTACCATGATCACCTaGATGCCTGCGCTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: SQAQGNDSLTSLLLIKQNVTMIT*MPALRH
Trigger: GTGCCGAAGCGCAGGCATCAAGGTGATCATGGTAAC...ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTCATTGCCTTGGGCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp AATGACAGCCTTTGGGAGGTGGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTATCTCTCCCCAAATGTaGCCACCCAATGCCACCCGT +
Preference number: 5 (lower is better)
Translates to: NDSLWEVVYGSDPMLVFCISPQM*PPNATR
Trigger: ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGAT...ACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTGATGGGTTCCTGCTTTaGGATGCTGATCTATTACAG +
Preference number: 5 (lower is better)
Translates to: LLSCLIISPQMLPPNATRDGFLL*DADLLQ
Trigger: CTGTAATAGATCAGCATCCAAAAGCAGGAACCCATC...ACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCAGATGGGTTCCTGCTTTaGGATGCTGATCTATTACAG +
Preference number: 5 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPDGFLL*DADLLQ
Trigger: CTGTAATAGATCAGCATCCAAAAGCAGGAACCCATC...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CAGCGGGGAACTCTGTGGCACACAAGTGTGGCATTTCTGGAAGCTCTTGATTGCTCAAATGTCCTGTCATaGGCACTACCTCACTTCCTT +
Preference number: 5 (lower is better)
Translates to: QRGTLWHTSVAFLEALDCSNVLS*ALPHFL
Trigger: AAGGAAGTGAGGTAGTGCCAATGACAGGACATTTGA...GCAATCAAGAGCTTCCAGAAATGCCACACTTGTGTGCCACAGAGTTCCCCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp TGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAGATGTCTTTCTCACTaGCATGACCTATCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: CCHPMPPVISIPLHHHPHRCLSH*HDLSRS
Trigger: AGACCTAGATAGGTCATGCAAGTGAGAAAGACATCT...GTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS TCA 90 bp AGCAAAGCTTCTCCGTGGGAAAGTTCAGCTCATCCGTGTCGAATTTaGAGCCCCGAGGAAACTTTCCAGATGGCAGATTCAGTTGACAGA +
Preference number: 5 (lower is better)
Translates to: SKASPWESSAHPCRI*SPEETFQMADSVDR
Trigger: TCTGTCAACTGAATCTGCCATCTGGAAAGTTTCCTCGGGGCTTCAAATTCGACACGGATGAGCTGAACTTTCCCACGGAGAAGCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
ENST00000472488.5
CDS-3UTR CAA 90 bp ATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCAAGATATAGATTGTCGTaGGATGGTTCATCCTCCATG +
Preference number: 5 (lower is better)
Translates to: MLPPNATRYFHPSPSPSPRYRLS*DGSSSM
Trigger: CATGGAGGATGAACCATCCAACGACAATCTATATCT...TGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCACACCCAGATATAGATaGTCGTTGGATGGTTCATCC +
Preference number: 5 (lower is better)
Translates to: PNVATQCHPLFPSLSITITPRYR*SLDGSS
Trigger: GGATGAACCATCCAACGACAATCTATATCTGGGTGT...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCCCGGATCACAAGGGCTaGCTGAGGTACCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIIPDHKG*LRYHVL
Trigger: AAGAACATGGTACCTCAGCAAGCCCTTGTGATCCGG...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp TCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATGTGCCTTCAACACAGTaGGTGGAGAAGAAACAGATA +
Preference number: 5 (lower is better)
Translates to: SLPKCCHPMPPVISIPLHVPSTQ*VEKKQI
Trigger: TATCTGTTTCTTCTCCACCAACTGTGTTGAAGGCAC...ATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCGAGAGCTCAATGCACTaGAGCAGAGCTGACTCAGAG +
Preference number: 5 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIIESSMH*SRADSE
Trigger: CTCTGAGTCAGCTCTGCTCAAGTGCATTGAGCTCTC...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCAATAGACAGCTGGTACTaGTTGGTAGAGTTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: PQMLPPNATRYFHPSPSPIDSWY*LVELKG
Trigger: TCCTTTCAACTCTACCAACAAGTACCAGCTGTCTAT...TGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCATTTTGAAAGGCATCTaGCATCTCCTTGTCGAGCGG +
Preference number: 5 (lower is better)
Translates to: PHYLSPNVATQCHPLFPSILKGI*HLLVER
Trigger: CCGCTCGACAAGGAGATGCAAGATGCCTTTCAAAAT...GGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp AGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGGTCTGAAGGGGAAAGATGGCAGATTCAGTaGACAGAATCCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: RLLHSPEEPFVIARSEGERWQIQ*TESQHT
Trigger: CGTGTGCTGGGATTCTGTCAACTGAATCTGCCATCT...TTCCCCTTCAGACCTTGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATCCAAAAATCAGGATCTaGTTCTTCATGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LSCLIISPQMLPPNATRYPKIRI*FFMPCW
Trigger: CCAGCAGGGCATGAAGAACAAGATCCTGATTTTTGG...ATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CATCACCCCAATTTATATACCCCGCAACTTAGCCTGCTGAGTTGCCTCATTATCTCCAGTCTCAGGCTCTaGCACTCACCAGAAGAACCT +
Preference number: 5 (lower is better)
Translates to: HHPNLYTPQLSLLSCLIISSLRL*HSPEEP
Trigger: AGGTTCTTCTGGTGAGTGCAAGAGCCTGAGACTGGA...GATAATGAGGCAACTCAGCAGGCTAAGTTGCGGGGTATATAAATTGGGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCATTTCTGGAAGCTCTaGATTGCCTTCTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: CLIISPQMLPPNATRYFHHFWKL*IAFWSC
Trigger: GCAGGACCAGAAGGCAATCAAGAGCTTCCAGAAATG...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp AATGACAGCCTTTGGGAGGTGGTTTATGGGTCTGACCCAATGCTTGTCTTTTGTTTTTCCAGGGTTGGCTaGGCAGTGTCGGGGAATGAT +
Preference number: 5 (lower is better)
Translates to: NDSLWEVVYGSDPMLVFCFSRVG*AVSGND
Trigger: ATCATTCCCCGACACTGCCAAGCCAACCCTGGAAAA...ACAAAAGACAAGCATTGGGTCAGACCCATAAACCACCTCCCAAAGGCTGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS CCA 90 bp CTTAACCCAATACCTGAAAGCTTTGAAATCCACTCAGTCTTGGGGTaGACAGAACAGAGATCTCCCTGGGGAAGGGAGATACATTTCCCA +
Preference number: 5 (lower is better)
Translates to: LNPIPESFEIHSVLG*TEQRSPWGREIHFP
Trigger: TGGGAAATGTATCTCCCTTCCCCAGGGAGATCTCTGTTCTGTCCACCCCAAGACTGAGTGGATTTCAAAGCTTTCAGGTATTGGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS CCA 90 bp GGGTTCTTAACCCAATACCTGAAAGCTTTGAAATCCACTCAGTCTTaGGGTGGACAGAACAGAGATCTCCCTGGGGAAGGGAGATACATT +
Preference number: 5 (lower is better)
Translates to: GFLTQYLKALKSTQS*GGQNRDLPGEGRYI
Trigger: AATGTATCTCCCTTCCCCAGGGAGATCTCTGTTCTGTCCACCCCAAGACTGAGTGGATTTCAAAGCTTTCAGGTATTGGGTTAAGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS-3UTR CAA 90 bp CCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATAGATATAGATTGTCGTaGGATGGTTCATCCTCCATG +
Preference number: 5 (lower is better)
Translates to: PKCCHPMPPVISIPLHHHRYRLS*DGSSSM
Trigger: CATGGAGGATGAACCATCCAACGACAATCTATATCT...ATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000392233.7
CDS-3UTR CAA 90 bp ACCTTTTCCAGTCTCAGGCTCTTGCACTCACCAGAAGAACCTTTTGTGATTGCAAGTGTTCAATCTCCATaGCTATGGGTGTCCGCCCAA +
Preference number: 5 (lower is better)
Translates to: TFSSLRLLHSPEEPFVIASVQSP*LWVSAQ
Trigger: TTGGGCGGACACCCATAGCAATGGAGATTGAACACT...TGCAATCACAAAAGGTTCTTCTGGTGAGTGCAAGAGCCTGAGACTGGAAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361216.8
CDS-3UTR CAA 90 bp CTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTGATCTACCAAAAATCAGGATCTaGTTCTTCATGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LRGLPSGLDGFLLLDADLPKIRI*FFMPCW
Trigger: CCAGCAGGGCATGAAGAACAAGATCCTGATTTTTGG...TAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CTGAGAGGGCTTCCTTCTGGTTTAGATGGGTTCCTGCTTTTGGATGCTGATCTAACTACCTCACTTCCTTaGTTGTTTCCTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LRGLPSGLDGFLLLDADLTTSLP*LFPSSS
Trigger: GCTGGAGGAAGGAAACAACAAAGGAAGTGAGGTAGT...TAGATCAGCATCCAAAAGCAGGAACCCATCTAAACCAGAAGGAAGCCCTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp GCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCCCCACAACATTAGTATTTTTCCTCTaGTCCAAAGGTTCTGACCAT +
Preference number: 5 (lower is better)
Translates to: ATQCHPLFPSLSITIPTTLVFFL*SKGSDH
Trigger: ATGGTCAGAACCTTTGGACAAGAGGAAAAATACTAA...TGTTGTGGGGATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCTCTCCATCACCATCAGATGTCTTTCTCACTaGCATGACCTATCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: PNVATQCHPLFPSLSITIRCLSH*HDLSRS
Trigger: AGACCTAGATAGGTCATGCAAGTGAGAAAGACATCT...GATGGTGATGGAGAGGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp CTTAGCCTGCTGAGTTGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCGACTCCCTTACTTCCTaGCTTCTGATAAAGCAAAAT +
Preference number: 5 (lower is better)
Translates to: LSLLSCLIISPQMLPPNADSLTS*LLIKQN
Trigger: ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTC...GGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCAACTCAGCAGGCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS-3UTR CAA 90 bp TGCCTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATATAGACAGCTGGTACTaGTTGGTAGAGTTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: CLIISPQMLPPNATRYFHIDSWY*LVELKG
Trigger: TCCTTTCAACTCTACCAACAAGTACCAGCTGTCTAT...ATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
CDS-3UTR CAA 90 bp CTCATTATCTCTCCCCAAATGTTGCCACCCAATGCCACCCGTTATTTCCATCCCGACTCCCTTACTTCCTaGCTTCTGATAAAGCAAAAT +
Preference number: 5 (lower is better)
Translates to: LIISPQMLPPNATRYFHPDSLTS*LLIKQN
Trigger: ATTTTGCTTTATCAGAAGCAAGGAAGTAAGGGAGTC...GGGATGGAAATAACGGGTGGCATTGGGTGGCAACATTTGGGGAGAGATAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS TCA 90 bp CTATATGAAACCTATCTATGGATATACAGATGGAAGATTAAAATCTaGTGCCCTCCTTACAGCTCTGGTCCAGGGCTGAGTTGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LYETYLWIYRWKIKI*CPPYSSGPGLSWKL
Trigger: AAGCTTCCAACTCAGCCCTGGACCAGAGCTGTAAGGAGGGCATCAGATTTTAATCTTCCATCTGTATATCCATAGATAGGTTTCATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472488.5
CDS-3UTR CAA 90 bp TTTTTCCTCTTGTCCAAAGGTTCTGACCATGTTCATGACCTAAGCTTGTCCCTGTTAGTATTTTTCCTCTaGTCCAAAGGTTCTGACCAT +
Preference number: 5 (lower is better)
Translates to: FFLLSKGSDHVHDLSLSLLVFFL*SKGSDH
Trigger: ATGGTCAGAACCTTTGGACAAGAGGAAAAATACTAA...CAGGGACAAGCTTAGGTCATGAACATGGTCAGAACCTTTGGACAAGAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361216.8
ENST00000447527.1
CDS TCA 72 bp CTTGCCGCCCCCATTCTCTGCCGTGGTGGCGGCAGGTaGGTACTCACGGCCAGCCCCACGGCCCATCTTGGG +
Preference number: 6 (lower is better)
Translates to: LAAPILCRGGGR*VLTASPTAHLG
Trigger: CCCAAGATGGGCCGTGGGGCTGGCCGTGAGTACTCACCTGCCGCCACCACGGCAGAGAATGGGGGCGGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000472488.5
ENST00000478587.1
CDS CCA 72 bp CTCACGGCCAGCCCCACGGCCCATCTTGGGGCAGAGTaGCTGAGGGACCTTAGCGGGAGAGGTCACCAGGAG +
Preference number: 6 (lower is better)
Translates to: LTASPTAHLGAE*LRDLSGRGHQE
Trigger: CTCCTGGTGACCTCTCCCGCTAAGGTCCCTCAGCCACTCTGCCCCAAGATGGGCCGTGGGGCTGGCCGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000472488.5
ENST00000478587.1
CDS CCA 72 bp TCTGTTTCTTCTTGCCGCCCCCATTCTCTGCCGTGGTaGCGGCAGGTGAGTACTCACGGCCAGCCCCACGGC +
Preference number: 6 (lower is better)
Translates to: SVSSCRPHSLPW*RQVSTHGQPHG
Trigger: GCCGTGGGGCTGGCCGTGAGTACTCACCTGCCGCCACCACGGCAGAGAATGGGGGCGGCAAGAAGAAACAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000472488.5
ENST00000478587.1
CDS TCA 72 bp CTCCATTGCTATGGGTGTCCGCCCAACCTCCAGGCCTaGGGCGAGAGTAGCTATGCGGCCCATCACCGTCCG +
Preference number: 6 (lower is better)
Translates to: LHCYGCPPNLQA*GESSYAAHHRP
Trigger: CGGACGGTGATGGGCCGCATAGCTACTCTCGCCTCAGGCCTGGAGGTTGGGCGGACACCCATAGCAATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000472488.5
CDS CCA 72 bp GCCCGCTGGTTGGTGAGGCCCTTGGACAGGTCCACTTaGTATTTGCGGCCCAGCTCATCCAAGGACAGCTTG +
Preference number: 6 (lower is better)
Translates to: ARWLVRPLDRST*YLRPSSSKDSL
Trigger: CAAGCTGTCCTTGGATGAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAAGGGCCTCACCAACCAGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000472488.5
CDS CAA 72 bp AGCCCGCTGGTTGGTGAGGCCCTTGGACAGGTCCACTaGGTATTTGCGGCCCAGCTCATCCAAGGACAGCTT +
Preference number: 6 (lower is better)
Translates to: SPLVGEALGQVH*VFAAQLIQGQL
Trigger: AAGCTGTCCTTGGATGAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAAGGGCCTCACCAACCAGCGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000472488.5
CDS GCA 72 bp TCAGCTCATCCAGTTCCTTCTCCTTCTGTTTCTTCTTaGCGCCCCCATTCTCTGCCGTGGTGGCGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: SAHPVPSPSVSS*RPHSLPWWRQV
Trigger: CACCTGCCGCCACCACGGCAGAGAATGGGGGCGGCAAGAAGAAACAGAAGGAGAAGGAACTGGATGAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000472488.5
ENST00000478587.1
CDS CAA 72 bp GCCCCTCCACTCACCTTGGACAGGTCCACTTGGTATTaGCGGCCCAGCTCATCCAAGGACAGCTTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: APPLTLDRSTWY*RPSSSKDSLWS
Trigger: TGACCACAAGCTGTCCTTGGATGAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAAGGTGAGTGGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478587.1
CDS CAA 90 bp GACAGGTCCACTTGGTATTTGCGGCCCAGCTCATCCAAGGACAGCTaGTGGTCATCCTGGGGAAGGGAGGGTGAGTTACTTTGGGGAGGA +
Preference number: 6 (lower is better)
Translates to: DRSTWYLRPSSSKDS*WSSWGREGELLWGG
Trigger: TCCTCCCCAAAGTAACTCACCCTCCCTTCCCCAGGATGACCACAAGCTGTCCTTGGATGAGCTGGGCCGCAAATACCAAGTGGACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478587.1
CDS GCA 72 bp CCCCTCCACTCACCTTGGACAGGTCCACTTGGTATTTaGGGCCCAGCTCATCCAAGGACAGCTTGTGGTCAT +
Preference number: 6 (lower is better)
Translates to: PLHSPWTGPLGI*GPAHPRTACGH
Trigger: ATGACCACAAGCTGTCCTTGGATGAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAAGGTGAGTGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478587.1
CDS CCA 72 bp CTAGAAGCCCCTCCACTCACCTTGGACAGGTCCACTTaGTATTTGCGGCCCAGCTCATCCAAGGACAGCTTG +
Preference number: 6 (lower is better)
Translates to: LEAPPLTLDRST*YLRPSSSKDSL
Trigger: CAAGCTGTCCTTGGATGAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAAGGTGAGTGGAGGGGCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478587.1
CDS CAA 72 bp TGGTTGGTGAGGCCCTTGGACAGGTCCACTTGGTATTaGCGGCCCAGCTCATCCAAGGACAGCTTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: WLVRPLDRSTWY*RPSSSKDSLWS
Trigger: TGACCACAAGCTGTCCTTGGATGAGCTGGGCCGCAAATACCAAGTGGACCTGTCCAAGGGCCTCACCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000472488.5
CDS GCA 72 bp CTGGGGAAGGGAGATACATTTCCCATGGAGTCAGGCTaGCCTCAGTCAATACCCTGCTCTGTGGAGGGTGTT +
Preference number: 6 (lower is better)
Translates to: LGKGDTFPMESG*PQSIPCSVEGV
Trigger: AACACCCTCCACAGAGCAGGGTATTGACTGAGGGCAGCCTGACTCCATGGGAAATGTATCTCCCTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS CCA 72 bp CACTCAGTCTTGGGGTGGACAGAACAGAGATCTCCCTaGGGAAGGGAGATACATTTCCCATGGAGTCAGGCT +
Preference number: 6 (lower is better)
Translates to: HSVLGWTEQRSP*GREIHFPWSQA
Trigger: AGCCTGACTCCATGGGAAATGTATCTCCCTTCCCCAGGGAGATCTCTGTTCTGTCCACCCCAAGACTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS CAA 72 bp ACTTGGTATTTGCGGCCCAGCTCATCCAAGGACAGCTaGTGGTCATCCTGGGGAAGGGAGGGTGAGTTACTT +
Preference number: 6 (lower is better)
Translates to: TWYLRPSSSKDS*WSSWGREGELL
Trigger: AAGTAACTCACCCTCCCTTCCCCAGGATGACCACAAGCTGTCCTTGGATGAGCTGGGCCGCAAATACCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478587.1
CDS GCA 72 bp TTTCCCATGGAGTCAGGCTGCCCTCAGTCAATACCCTaGTCTGTGGAGGGTGTTTCCATAATATTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: FPMESGCPQSIP*SVEGVSIIFRA
Trigger: GGCCCTGAATATTATGGAAACACCCTCCACAGAGCAGGGTATTGACTGAGGGCAGCCTGACTCCATGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS CCA 72 bp ACCCAATACCTGAAAGCTTTGAAATCCACTCAGTCTTaGGGTGGACAGAACAGAGATCTCCCTGGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: TQYLKALKSTQS*GGQNRDLPGEG
Trigger: CCCTTCCCCAGGGAGATCTCTGTTCTGTCCACCCCAAGACTGAGTGGATTTCAAAGCTTTCAGGTATTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS TCA 72 bp TCTCCGTGGGAAAGTTCAGCTCATCCGTGTCGAATTTaGAGCCCCGAGGAAACTTTCCAGATGGCAGATTCA +
Preference number: 6 (lower is better)
Translates to: SPWESSAHPCRI*SPEETFQMADS
Trigger: TGAATCTGCCATCTGGAAAGTTTCCTCGGGGCTTCAAATTCGACACGGATGAGCTGAACTTTCCCACGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361216.8
ENST00000392233.7
ENST00000447527.1
ENST00000472488.5
CDS CAA 72 bp AACCCAATACCTGAAAGCTTTGAAATCCACTCAGTCTaGGGGTGGACAGAACAGAGATCTCCCTGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: NPIPESFEIHSV*GWTEQRSPWGR
Trigger: CCTTCCCCAGGGAGATCTCTGTTCTGTCCACCCCAAGACTGAGTGGATTTCAAAGCTTTCAGGTATTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS CCA 72 bp ATACCTGAAAGCTTTGAAATCCACTCAGTCTTGGGGTaGACAGAACAGAGATCTCCCTGGGGAAGGGAGATA +
Preference number: 6 (lower is better)
Translates to: IPESFEIHSVLG*TEQRSPWGREI
Trigger: TATCTCCCTTCCCCAGGGAGATCTCTGTTCTGTCCACCCCAAGACTGAGTGGATTTCAAAGCTTTCAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS TCA 72 bp CTTTTGCCAGGTAAGTACTACCAGAGCCCTTCATCCTaGCTATGGATTCAGGATTCAGACTCTTTCCTACAG +
Preference number: 6 (lower is better)
Translates to: LLPGKYYQSPSS*LWIQDSDSFLQ
Trigger: CTGTAGGAAAGAGTCTGAATCCTGAATCCATAGTCAGGATGAAGGGCTCTGGTAGTACTTACCTGGCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468587.1
CDS TCA 72 bp ACCTATCTATGGATATACAGATGGAAGATTAAAATCTaGTGCCCTCCTTACAGCTCTGGTCCAGGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: TYLWIYRWKIKI*CPPYSSGPGLS
Trigger: ACTCAGCCCTGGACCAGAGCTGTAAGGAGGGCATCAGATTTTAATCTTCCATCTGTATATCCATAGATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472488.5