RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP1A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163399

Ensembl transcript IDs: ENST00000295598.10, ENST00000369494.5, ENST00000369496.8, ENST00000418797.5, ENST00000440951.1, ENST00000463382.1, ENST00000479960.1, ENST00000488733.1, ENST00000491156.1, ENST00000495965.1, ENST00000537345.5

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTaGTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTAC +
Preference number: 1 (lower is better)
Translates to: LHASFQDVLLPHMLR*FPTRVEFQTPRLKY
Trigger: GTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
3UTR-3UTR TCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGCAGAGTGTGTGGCCTaGTGCTCCACGGCGTGCAGG +
Preference number: 2 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQAECVA*CSTACR
Trigger: CCTGCACGCCGTGGAGCATCAGGCCACACACTCTGC...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
3UTR-3UTR TCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAGCAGAGTGTGTGGCCTaGTGCTCCACGGCGTGCAGG +
Preference number: 2 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPAECVA*CSTACR
Trigger: CCTGCACGCCGTGGAGCATCAGGCCACACACTCTGC...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
3UTR-3UTR GCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAGGGGTGGGTGTCGGATaGAGAGTGTGTGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPGVGVG*RVCGLM
Trigger: CATCAGGCCACACACTCTGCATCCGACACCCACCCC...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
3UTR-3UTR CCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCCGGATGCAGAGTGTGTaGCCTGATGCTCCACGGCGT +
Preference number: 2 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSRMQSV*PDAPRR
Trigger: ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCG...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
3UTR-3UTR CCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCGGATGCAGAGTGTGTaGCCTGATGCTCCACGGCGT +
Preference number: 2 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYRMQSV*PDAPRR
Trigger: ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCG...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
3UTR-3UTR CCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCTACACAAAGAGGGGGTaGGTGTCGGATGCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFYTKRG*VSDAEC
Trigger: ACACTCTGCATCCGACACCCACCCCCTCTTTGTGTA...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
3UTR GCA 72 bp TCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTaGTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGA +
Preference number: 3 (lower is better)
Translates to: SFQDVLLPHMLR*FPTRVEFQTPR
Trigger: TCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGTGCCGCCGCCCGGGCTaGTACCGCTGTTGCCACGTG +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGCRRPG*YRCCHV
Trigger: CACGTGGCAACAGCGGTAGCAGCCCGGGCGGCGGCA...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295598.10
CDS-3UTR TCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGAGTGTGTGGCCTaGTGCTCCACGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRAECVA*CSTACR
Trigger: CCTGCACGCCGTGGAGCATCAGGCCACACACTCTGC...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCTCCCCATGGTGGCGGTaGTCAGTGCCCGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLSPWWR*SVPGAG
Trigger: CCCGGCGCCGGGCACTGAGCACCGCCACCATGGGGA...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295598.10
CDS-3UTR GCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCGAGGGCGGCCGCCTCTaGGCGGAGCAAGCTAAGCCC +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLEGGRL*AEQAKP
Trigger: GGGCTTAGCTTGCTCCGCGCAGAGGCGGCCGCCCTC...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537345.5
CDS-3UTR CCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGATCACCAACAGGTGTTaGGGCTCCGATGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGITNRC*GSDVLG
Trigger: CCCCAACACATCGGAGCCCCAACACCTGTTGGTGAT...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGTGGGCTGTCTCTTCATaGTGTCACTCTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGWAVSS*CHSQPA
Trigger: AGCAGGCTGAGAGTGACATCATGAAGAGACAGCCCA...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTCGGAGGCCCAACAGGTaGATTGGGAGGAAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRRRPNR*IGRKPF
Trigger: GAACGGCTTCCTCCCAATTCACCTGTTGGGCCTCCG...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCGGTGGCGGTGCTCAGTaGCCGGCGCCGGGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFGGGAQ*PAPGPV
Trigger: GACAGGACCCGGCGCCGGGCACTGAGCACCGCCACC...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295598.10
CDS-3UTR GCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGAGCCAGGCTCAGGGATaGCGGCTCAGTCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQSQAQG*RLSPGA
Trigger: GGCCCCGGGACTGAGCCGGCATCCCTGAGCCTGGCT...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537345.5
CDS-3UTR CCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTCGGATGCAGAGTGTGTaGCCTGATGCTCCACGGCGT +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRRMQSV*PDAPRR
Trigger: ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCG...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAGGCTGCTACCGCTGTTaGCACGTGTCCGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPGCYRC*HVSASS
Trigger: GGAGGAGGCGGACACGTGGCAACAGCGGTAGCAGCC...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295598.10
CDS-3UTR GCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGTGTCCTTTAGATCACTaGCGTGTACTACGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGCPLDH*RVLRRP
Trigger: AGGCCTGCGTAGTACACGGCAGTGATCTAAAGGACA...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTACCAAGTCGGCCCACTaGACCACCACGATACTGACG +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRTKSAH*TTTILT
Trigger: CGTCAGTATCGTGGTGGTGCAGTGGGCCGACTTGGT...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTTGCTTCCCCACATGCTaGGGTGCTTTCCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRCFPTC*GAFLPG
Trigger: CCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCA...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGGCTGCTCCTTGCCGTaGAGGAGGATAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRGCSLP*RRIELQ
Trigger: TTGCAGCTCTATCCTCCTCCACGGCAAGGAGCAGCC...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGTACTACGCAGGCCTTaGCATCCCTGGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRVLRRP*HPWGSP
Trigger: AGGTGAACCCCAGGGATGCCAAGGCCTGCGTAGTAC...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGGGTCAATCATGGAGATaGGCCCAACAAAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGGQSWR*AQQSTD
Trigger: ATCTGTGCTTTGTTGGGCTCATCTCCATGATTGACC...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGTTCTTCCCATCACAGTaGGATCCCCAGTGTAGACAA +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGFFPSQ*DPQCRQ
Trigger: TTGTCTACACTGGGGATCGCACTGTGATGGGAAGAA...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGGTTAGCCTGAAACACTaGCCTGTTACAAAGACCTGC +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGVSLKH*PVTKTC
Trigger: GCAGGTCTTTGTAACAGGGCAGTGTTTCAGGCTAAC...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTCATTCCAGGACGTCTTaGTTCCCCACATGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRHSRTS*FPTCCG
Trigger: ACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATG...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGCCCCATAGAGCTACATaGTTCATTCCAGGACGTCTT +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGPHRAT*FIPGRL
Trigger: AAGACGTCCTGGAATGAAGCATGTAGCTCTATGGGG...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCCAACCCCCTTCCCCATaGTGGCGGTGCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSQPPSP*WRCSVP
Trigger: GGGCACTGAGCACCGCCACCATGGGGAAGGGGGTTG...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295598.10
CDS-3UTR TCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTTGGGCTGTCTCTTCATaGTGTCACTCTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRWAVSS*CHSQPA
Trigger: AGCAGGCTGAGAGTGACATCATGAAGAGACAGCCCA...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACGCAGAGTGTGTGGCCTaGTGCTCCACGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYAECVA*CSTACR
Trigger: CCTGCACGCCGTGGAGCATCAGGCCACACACTCTGC...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTCCTCATCCAGGGGCTaGTCCTTGCCGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSSSSRG*SLPWRR
Trigger: CCTCCTCCACGGCAAGGAGCAGCCCCTGGATGAGGA...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGTCCTCATCCAGGGGCTaGTCCTTGCCGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLSSSRG*SLPWRR
Trigger: CCTCCTCCACGGCAAGGAGCAGCCCCTGGATGAGGA...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGAAAATGTCATCCAGCTaGTCGGAGGTCATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGKMSSS*SEVMSF
Trigger: AAAGGACATGACCTCCGAGCAGCTGGATGACATTTT...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCGGGGTGGGTGTCGGATaGAGAGTGTGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLGVGVG*RVCGLM
Trigger: CATCAGGCCACACACTCTGCATCCGACACCCACCCC...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTTCTTGCTTCCCCACATaGTGCGGTGCTTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRSCFPT*CGAFLP
Trigger: TGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGA...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGAGGAAACTGTTCATCTaGCAGAAAGAGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGRKLFI*QKEVAE
Trigger: TTCTGCCACCTCTTTCTGCCAGATGAACAGTTTCCT...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGTTAGCTGTGATTGGATaGTCTCCTGTGACCATGATG +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGLAVIG*SPVTMM
Trigger: CATCATGGTCACAGGAGACCATCCAATCACAGCTAA...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCAAGACACACCCTTTCTaGCACCAGCCCGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSKTHPF*HQPAQP
Trigger: CGGCTGGGCGGGCTGGTGCCAGAAAGGGTGTGTCTT...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537345.5
CDS-3UTR GCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCATCCTCATCCAGGGGCTaGTCCTTGCCGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPSSSRG*SLPWRR
Trigger: CCTCCTCCACGGCAAGGAGCAGCCCCTGGATGAGGA...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCGGGGTGGGTGTCGGATaGAGAGTGTGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSGVGVG*RVCGLM
Trigger: CATCAGGCCACACACTCTGCATCCGACACCCACCCC...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGGGTGGGTGTCGGATaGAGAGTGTGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQGVGVG*RVCGLM
Trigger: CATCAGGCCACACACTCTGCATCCGACACCCACCCC...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGTTCATTTGTGAAATCTaGAGACCTAGTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGFICEI*RPSLGF
Trigger: GAACCCCAGACTAGGTCTCCAGATTTCACAAATGAA...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCCCAGAAGCAAGTGTaGCAATTCTTCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRAQKQV*QFFPSQ
Trigger: CTGTGATGGGAAGAATTGCCACACTTGCTTCTGGGC...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAGGAACGGCCGCCCGTaGAGGGTCAATCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPRNGRP*RVNHGD
Trigger: ATCTCCATGATTGACCCTCCACGGGCGGCCGTTCCT...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCATCCCTGGGGTTCACCTaGCTGACTGGGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPSLGFT*LTGMLR
Trigger: CCTCAACATCCCAGTCAGCCAGGTGAACCCCAGGGA...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCGTACTACGCAGGCCTTaGCATCCCTGGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLVLRRP*HPWGSP
Trigger: AGGTGAACCCCAGGGATGCCAAGGCCTGCGTAGTAC...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCACAATGCAGAGGATGGTaGCAGTCCCCAGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPQCRGW*QSPVVV
Trigger: CACTACCACTGGGGACTGTCACCATCCTCTGCATTG...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCAATGCAGAGGATGGTaGCAGTCCCCAGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLQCRGW*QSPVVV
Trigger: CACTACCACTGGGGACTGTCACCATCCTCTGCATTG...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCATCCTGGTCTTACAGATaGCCAAGTCGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPSWSYR*PSRPTA
Trigger: TGCAGTGGGCCGACTTGGTCATCTGTAAGACCAGGA...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGGGAAGGAGAAGGAGGTaGCGGCGGTCGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKGRRRR*RRSQGG
Trigger: CCCTCCCTGCGACCGCCGTCACCTCCTTCTCCTTCC...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537345.5
CDS-3UTR GCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTATCATGTCAGCAGCTTaGTTGGACACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRIMSAA*LDTSEP
Trigger: TGGCTCAGATGTGTCCAAGCAAGCTGCTGACATGAT...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGGTATCTCGACGATTTTaGCGTATCTTTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGVSRRF*RIFLSS
Trigger: AGATGAGAGAAAGATACGCCAAAATCGTCGAGATAC...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCATCACCAACAGGTGTTaGGGCTCCGATGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLITNRC*GSDVLG
Trigger: CCCCAACACATCGGAGCCCCAACACCTGTTGGTGAT...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGGGCTGCTCCTTGCCGTaGAGGAGGATAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLGCSLP*RRIELQ
Trigger: TTGCAGCTCTATCCTCCTCCACGGCAAGGAGCAGCC...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGAGGAACGGCCGCCCGTaGAGGGTCAATCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLRNGRP*RVNHGD
Trigger: ATCTCCATGATTGACCCTCCACGGGCGGCCGTTCCT...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCGTACTACGCAGGCCTTaGCATCCCTGGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSVLRRP*HPWGSP
Trigger: AGGTGAACCCCAGGGATGCCAAGGCCTGCGTAGTAC...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCGGATGCAGAGTGTGTaGCCTGATGCTCCACGGCGT +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFRMQSV*PDAPRR
Trigger: ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCG...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCCCTAGTCTGGGGTTCTaGTTCACCAGTGAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSPSLGF*FTSERG
Trigger: TCCTCGCTCACTGGTGAATCAGAACCCCAGACTAGG...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTTTTTCCTGGTTAGCCTaGAACACTGCCCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRFSWLA*NTALLQ
Trigger: TTGTAACAGGGCAGTGTTTCAGGCTAACCAGGAAAA...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCTTGCTTGGACACATCTaGGCCAGCAATCCCCATAGC +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLLLGHI*ASNPHS
Trigger: GCTATGGGGATTGCTGGCTCAGATGTGTCCAAGCAA...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTCCTGGTCTTACAGATaGCCAAGTCGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSSWSYR*PSRPTA
Trigger: TGCAGTGGGCCGACTTGGTCATCTGTAAGACCAGGA...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGCAGCACTTCGACATTTaGCCACGGCATCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQQHFDI*PRHQER
Trigger: CCGTTCCTGATGCCGTGGGCAAATGTCGAAGTGCTG...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCCAGCACTTCGACATTTaGCCACGGCATCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSQHFDI*PRHQER
Trigger: CCGTTCCTGATGCCGTGGGCAAATGTCGAAGTGCTG...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGCAGCACTTCGACATTTaGCCACGGCATCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLQHFDI*PRHQER
Trigger: CCGTTCCTGATGCCGTGGGCAAATGTCGAAGTGCTG...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCACCAAGTCGGCCCACTaGACCACCACGATACTGACG +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFTKSAH*TTTILT
Trigger: CGTCAGTATCGTGGTGGTGCAGTGGGCCGACTTGGT...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCCCCACATGCTGCGGTaGTTTCCTACCAGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFPHMLR*FPTRVE
Trigger: CTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGG...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCACCCCACATGCTGCGGTaGTTTCCTACCAGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPPHMLR*FPTRVE
Trigger: CTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGG...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACTGCTTCCCCACATGCTaGGGTGCTTTCCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYCFPTC*GAFLPG
Trigger: CCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCA...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCTCTTGCTTCCCCACATaGTGCGGTGCTTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLSCFPT*CGAFLP
Trigger: TGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGA...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGTGCCTTCAACACAATTaGTTGAAAAGAAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGCLQHN*LKRRQC
Trigger: ACATTGCCTTCTTTTCAACCAATTGTGTTGAAGGCA...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCAATTTCTGCAGCAATaGGGGTCTGGCCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLQFLQQ*GSGLLP
Trigger: TGGAAGGAGGCCAGACCCCCATTGCTGCAGAAATTG...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAGGCTGCTCCTTGCCGTaGAGGAGGATAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPGCSLP*RRIELQ
Trigger: TTGCAGCTCTATCCTCCTCCACGGCAAGGAGCAGCC...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGGAACGGCCGCCCGTaGAGGGTCAATCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPRNGRP*RVNHGD
Trigger: ATCTCCATGATTGACCCTCCACGGGCGGCCGTTCCT...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTTTAGCTGTGATTGGATaGTCTCCTGTGACCATGATG +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRLAVIG*SPVTMM
Trigger: CATCATGGTCACAGGAGACCATCCAATCACAGCTAA...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCTCCCTGGGGTTCACCTaGCTGACTGGGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFSLGFT*LTGMLR
Trigger: CCTCAACATCCCAGTCAGCCAGGTGAACCCCAGGGA...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGAAGCCTCCCAGGGCCTaGATCATTCCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQKPPRA*IIPICP
Trigger: TGGGCAGATTGGAATGATCCAGGCCCTGGGAGGCTT...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCGTTCTGATTCACCAGTaGGCGAGGAGTTATCCACCT +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLVLIHQ*ARSYPP
Trigger: AGGTGGATAACTCCTCGCTCACTGGTGAATCAGAAC...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCCTAGTCTGGGGTTCTaGTTCACCAGTGAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYPSLGF*FTSERG
Trigger: TCCTCGCTCACTGGTGAATCAGAACCCCAGACTAGG...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACGTGTCAGACAGACCGTaGCAGTGGCCAGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYVSDRP*QWPANL
Trigger: AAGGTTTGCTGGCCACTGTCACGGTCTGTCTGACAC...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGTTGCTTGGACACATCTaGGCCAGCAATCCCCATAGC +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLLLGHI*ASNPHS
Trigger: GCTATGGGGATTGCTGGCTCAGATGTGTCCAAGCAA...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCAATGCAGAGGATGGTaGCAGTCCCCAGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFQCRGW*QSPVVV
Trigger: CACTACCACTGGGGACTGTCACCATCCTCTGCATTG...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTGGGCTGTCTCTTCATaGTGTCACTCTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQWAVSS*CHSQPA
Trigger: AGCAGGCTGAGAGTGACATCATGAAGAGACAGCCCA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTGTCTTCCACATCGTTaGTCCAGCGGTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQCLPHR*SSGHPS
Trigger: ACTGGGATGACCGCTGGATCAACGATGTGGAAGACA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCATCCTGGTCTTACAGATaGCCAAGTCGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPSWSYR*PSRPTA
Trigger: TGCAGTGGGCCGACTTGGTCATCTGTAAGACCAGGA...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCGCCGGGTCCTGTCGCTaGAGAATCAGAGAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFAGSCR*RIREKS
Trigger: GCTTTTCTCTCTGATTCTCCAGCGACAGGACCCGGC...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295598.10
CDS-3UTR CCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCTCTGGAGACCTAGTCTaGGGTTCTGATTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLSGDLV*GSDSPV
Trigger: CACTGGTGAATCAGAACCCCAGACTAGGTCTCCAGA...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTTTCATTTGTGAAATCTaGAGACCTAGTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRFICEI*RPSLGF
Trigger: GAACCCCAGACTAGGTCTCCAGATTTCACAAATGAA...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTCCCTGGGGTTCACCTaGCTGACTGGGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKSLGFT*LTGMLR
Trigger: CCTCAACATCCCAGTCAGCCAGGTGAACCCCAGGGA...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCATGTCAGCAGCTTGCTTaGACACATCTGAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPCQQLA*THLSQQ
Trigger: TTGCTGGCTCAGATGTGTCCAAGCAAGCTGCTGACA...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCAAGCCTCCCAGGGCCTaGATCATTCCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFKPPRA*IIPICP
Trigger: TGGGCAGATTGGAATGATCCAGGCCCTGGGAGGCTT...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTACACAAAGAGGGGGTaGGTGTCGGATGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQYTKRG*VSDAEC
Trigger: ACACTCTGCATCCGACACCCACCCCCTCTTTGTGTA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGCCTAGTCTGGGGTTCTaGTTCACCAGTGAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKPSLGF*FTSERG
Trigger: TCCTCGCTCACTGGTGAATCAGAACCCCAGACTAGG...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGGTGTCAGACAGACCGTaGCAGTGGCCAGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKVSDRP*QWPANL
Trigger: AAGGTTTGCTGGCCACTGTCACGGTCTGTCTGACAC...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCTTGCTTGGACACATCTaGGCCAGCAATCCCCATAGC +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFLLGHI*ASNPHS
Trigger: GCTATGGGGATTGCTGGCTCAGATGTGTCCAAGCAA...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATATCAGGAACGGGGTaGTCTCGGGAATGTTACTGG +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLISGTG*SRECYW
Trigger: CCAGTAACATTCCCGAGATCACCCCGTTCCTGATAT...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCATCCAAACTCCAAGACTaGAGTACACAAAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPSKLQD*STQRGG
Trigger: ACCCCCTCTTTGTGTACTTCAGTCTTGGAGTTTGGA...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTGTCCTTTAGATCACTaGCGTGTACTACGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQCPLDH*RVLRRP
Trigger: AGGCCTGCGTAGTACACGGCAGTGATCTAAAGGACA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCCCCATAGAGCTACATaGTTCATTCCAGGACGTCTT +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLPHRAT*FIPGRL
Trigger: AAGACGTCCTGGAATGAAGCATGTAGCTCTATGGGG...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTCTGGAGACCTAGTCTaGGGTTCTGATTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQSGDLV*GSDSPV
Trigger: CACTGGTGAATCAGAACCCCAGACTAGGTCTCCAGA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAATTTCTGCAGCAATaGGGGTCTGGCCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYQFLQQ*GSGLLP
Trigger: TGGAAGGAGGCCAGACCCCCATTGCTGCAGAAATTG...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGATCACCAACAGGTGTTaGGGCTCCGATGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKITNRC*GSDVLG
Trigger: CCCCAACACATCGGAGCCCCAACACCTGTTGGTGAT...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTGTCAGCAGCTTGCTTaGACACATCTGAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQCQQLA*THLSQQ
Trigger: TTGCTGGCTCAGATGTGTCCAAGCAAGCTGCTGACA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGTGTCAGCAGCTTGCTTaGACACATCTGAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLCQQLA*THLSQQ
Trigger: TTGCTGGCTCAGATGTGTCCAAGCAAGCTGCTGACA...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGAAGCCTCCCAGGGCCTaGATCATTCCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKKPPRA*IIPICP
Trigger: TGGGCAGATTGGAATGATCCAGGCCCTGGGAGGCTT...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCTGTCATTTCCACAGATaGATGGTTTTCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLCHFHR*MVFRQP
Trigger: GGGCTGCCTGAAAACCATCCATCTGTGGAAATGACA...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCATCACAAGGGCTTGCTaGGGGACCATGTTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSITRAC*GTMFLK
Trigger: CTTCAAAAACATGGTCCCTCAGCAAGCCCTTGTGAT...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCGTTCTGATTCACCAGTaGGCGAGGAGTTATCCACCT +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFVLIHQ*ARSYPP
Trigger: AGGTGGATAACTCCTCGCTCACTGGTGAATCAGAAC...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAGTTCTGATTCACCAGTaGGCGAGGAGTTATCCACCT +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPVLIHQ*ARSYPP
Trigger: AGGTGGATAACTCCTCGCTCACTGGTGAATCAGAAC...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAAAGAGACACCACTCTaGTTCTCTGTCGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPKETPL*FSVVSA
Trigger: AGCTGATACGACAGAGAATCAGAGTGGTGTCTCTTT...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCATTTTCCTGGTTAGCCTaGAACACTGCCCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPFSWLA*NTALLQ
Trigger: TTGTAACAGGGCAGTGTTTCAGGCTAACCAGGAAAA...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGGGTCAATCATGGAGATaGGCCCAACAAAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLGQSWR*AQQSTD
Trigger: ATCTGTGCTTTGTTGGGCTCATCTCCATGATTGACC...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTCAATCATGGAGATaGGCCCAACAAAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQGQSWR*AQQSTD
Trigger: ATCTGTGCTTTGTTGGGCTCATCTCCATGATTGACC...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAATATCAGGAACGGGGTaGTCTCGGGAATGTTACTGG +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPISGTG*SRECYW
Trigger: CCAGTAACATTCCCGAGATCACCCCGTTCCTGATAT...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCCGTCATATACGAAGATaGGAAGAGAGTAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSRHIRR*EESRGR
Trigger: CCTTCCCCTACTCTCTTCTCATCTTCGTATATGACG...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGCGTCATATACGAAGATaGGAAGAGAGTAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLRHIRR*EESRGR
Trigger: CCTTCCCCTACTCTCTTCTCATCTTCGTATATGACG...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGTCCAAACTCCAAGACTaGAGTACACAAAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLSKLQD*STQRGG
Trigger: ACCCCCTCTTTGTGTACTTCAGTCTTGGAGTTTGGA...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACCTTGCAGCCATTTaGAGATATGATTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLHLAAI*RYDSEV
Trigger: GACCTCAGAATCATATCTGCAAATGGCTGCAAGGTG...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCGACAACAATACCACGTaGGGTGCCTTCAACACAATT +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLDNNTT*GAFNTI
Trigger: AATTGTGTTGAAGGCACCGCACGTGGTATTGTTGTC...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAGACAACAATACCACGTaGGGTGCCTTCAACACAATT +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPDNNTT*GAFNTI
Trigger: AATTGTGTTGAAGGCACCGCACGTGGTATTGTTGTC...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGTTCTTCCCATCACAGTaGGATCCCCAGTGTAGACAA +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLFFPSQ*DPQCRQ
Trigger: TTGTCTACACTGGGGATCGCACTGTGATGGGAAGAA...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCAAAATGTTCAATTTCTaGAGCAATGGGGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLKMFNF*SNGGLA
Trigger: GGCCAGACCCCCATTGCTGCAGAAATTGAACATTTT...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCTGTCCTTTAGATCACTaGCGTGTACTACGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFCPLDH*RVLRRP
Trigger: AGGCCTGCGTAGTACACGGCAGTGATCTAAAGGACA...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCAAAATGTCATCCAGCTaGTCGGAGGTCATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLKMSSS*SEVMSF
Trigger: AAAGGACATGACCTCCGAGCAGCTGGATGACATTTT...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGATCATGTCAGCAGCTTaGTTGGACACATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQIMSAA*LDTSEP
Trigger: TGGCTCAGATGTGTCCAAGCAAGCTGCTGACATGAT...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGACCAAGTCGGCCCACTaGACCACCACGATACTGACG +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKTKSAH*TTTILT
Trigger: CGTCAGTATCGTGGTGGTGCAGTGGGCCGACTTGGT...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTCTTGCTTCCCCACATaGTGCGGTGCTTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKSCFPT*CGAFLP
Trigger: TGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGA...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGCAATTTCTGCAGCAATaGGGGTCTGGCCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKQFLQQ*GSGLLP
Trigger: TGGAAGGAGGCCAGACCCCCATTGCTGCAGAAATTG...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAGGAAACTGTTCATCTaGCAGAAAGAGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPRKLFI*QKEVAE
Trigger: TTCTGCCACCTCTTTCTGCCAGATGAACAGTTTCCT...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCATTAGCTGTGATTGGATaGTCTCCTGTGACCATGATG +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPLAVIG*SPVTMM
Trigger: CATCATGGTCACAGGAGACCATCCAATCACAGCTAA...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTGTCATTTCCACAGATaGATGGTTTTCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQCHFHR*MVFRQP
Trigger: GGGCTGCCTGAAAACCATCCATCTGTGGAAATGACA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTGTCATTTCCACAGATaGATGGTTTTCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSCHFHR*MVFRQP
Trigger: GGGCTGCCTGAAAACCATCCATCTGTGGAAATGACA...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAGAAGCAACCAGTTATaGTTACAACGGCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPRSNQL*LQRLIA
Trigger: TGCTATCAGCCGTTGTAATCATAACTGGTTGCTTCT...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCATCACAAGGGCTTGCTaGGGGACCATGTTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFITRAC*GTMFLK
Trigger: CTTCAAAAACATGGTCCCTCAGCAAGCCCTTGTGAT...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGGTGTCAGACAGACCGTaGCAGTGGCCAGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKVSDRP*QWPANL
Trigger: AAGGTTTGCTGGCCACTGTCACGGTCTGTCTGACAC...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCACTGTCATCCGGTTCTaGGTCAGAGTTCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSTVIRF*VRVPVL
Trigger: TAAAACTGGAACTCTGACTCAGAACCGGATGACAGT...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGCAAGCCAGGTAGCTaGAGTCTTGTCAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPSKPGS*SLVKRD
Trigger: GTCTCTTTTGACAAGACTTCAGCTACCTGGCTTGCT...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGACAACAATACCACGTaGGGTGCCTTCAACACAATT +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQDNNTT*GAFNTI
Trigger: AATTGTGTTGAAGGCACCGCACGTGGTATTGTTGTC...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGAAAATGTTCAATTTCTaGAGCAATGGGGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLKMFNF*SNGGLA
Trigger: GGCCAGACCCCCATTGCTGCAGAAATTGAACATTTT...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCGTTAGCCTGAAACACTaGCCTGTTACAAAGACCTGC +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFVSLKH*PVTKTC
Trigger: GCAGGTCTTTGTAACAGGGCAGTGTTTCAGGCTAAC...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGGCCCAGAAGCAAGTGTaGCAATTCTTCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKAQKQV*QFFPSQ
Trigger: CTGTGATGGGAAGAATTGCCACACTTGCTTCTGGGC...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTTTATCACCTTGTTCTaGAACAGCTGCAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSFITLF*NSCRLI
Trigger: TATGAGCCTGCAGCTGTTTCAGAACAAGGTGATAAA...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCACTGTCATCCGGTTCTaGGTCAGAGTTCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFTVIRF*VRVPVL
Trigger: TAAAACTGGAACTCTGACTCAGAACCGGATGACAGT...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACACTGTCATCCGGTTCTaGGTCAGAGTTCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYTVIRF*VRVPVL
Trigger: TAAAACTGGAACTCTGACTCAGAACCGGATGACAGT...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGAGCAAGCCAGGTAGCTaGAGTCTTGTCAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKSKPGS*SLVKRD
Trigger: GTCTCTTTTGACAAGACTTCAGCTACCTGGCTTGCT...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCGTGTTGGGGTTCTTATaGATAGACAACTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSVLGFL*IDNWYL
Trigger: CAAGTACCAGTTGTCTATTCATAAGAACCCCAACAC...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGTGTCTTCCACATCGTTaGTCCAGCGGTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKCLPHR*SSGHPS
Trigger: ACTGGGATGACCGCTGGATCAACGATGTGGAAGACA...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCACCTTGCAGCCATTTaGAGATATGATTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYHLAAI*RYDSEV
Trigger: GACCTCAGAATCATATCTGCAAATGGCTGCAAGGTG...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCACCTTGCAGCCATTTaGAGATATGATTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFHLAAI*RYDSEV
Trigger: GACCTCAGAATCATATCTGCAAATGGCTGCAAGGTG...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAAAATGTTCAATTTCTaGAGCAATGGGGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPKMFNF*SNGGLA
Trigger: GGCCAGACCCCCATTGCTGCAGAAATTGAACATTTT...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCACAGCACAGCTCTATaGACTTTAAGAGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYHSTAL*TLRVLT
Trigger: AGTCAGCACTCTTAAAGTGCATAGAGCTGTGCTGTG...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCACACAGCACAGCTCTATaGACTTTAAGAGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPHSTAL*TLRVLT
Trigger: AGTCAGCACTCTTAAAGTGCATAGAGCTGTGCTGTG...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCAAAATGTCATCCAGCTaGTCGGAGGTCATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFKMSSS*SEVMSF
Trigger: AAAGGACATGACCTCCGAGCAGCTGGATGACATTTT...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCAGCAACCCCAATGTCTaGTTTCTTCAAAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFSNPNV*FLQSWR
Trigger: TCTCCAGCTTTGAAGAAAGCAGACATTGGGGTTGCT...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTTCATTTGTGAAATCTaGAGACCTAGTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQFICEI*RPSLGF
Trigger: GAACCCCAGACTAGGTCTCCAGATTTCACAAATGAA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCGTATCTCGACGATTTTaGCGTATCTTTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLVSRRF*RIFLSS
Trigger: AGATGAGAGAAAGATACGCCAAAATCGTCGAGATAC...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACAGGAAACTGTTCATCTaGCAGAAAGAGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYRKLFI*QKEVAE
Trigger: TTCTGCCACCTCTTTCTGCCAGATGAACAGTTTCCT...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCTCGTCAGTGTCAAACTaGAACCCTTCAGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFSSVSN*NPSGNC
Trigger: ACAGTTTCCTGAAGGGTTCCAGTTTGACACTGACGA...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCCAAGTTTGTCTGTTTTaGGATTTCTGGGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSQVCLF*DFWAVS
Trigger: AGAGACAGCCCAGAAATCCCAAAACAGACAAACTTG...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCATTTATCACCTTGTTCTaGAACAGCTGCAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPFITLF*NSCRLI
Trigger: TATGAGCCTGCAGCTGTTTCAGAACAAGGTGATAAA...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACTTTATCACCTTGTTCTaGAACAGCTGCAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYFITLF*NSCRLI
Trigger: TATGAGCCTGCAGCTGTTTCAGAACAAGGTGATAAA...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCAGAAGCAACCAGTTATaGTTACAACGGCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFRSNQL*LQRLIA
Trigger: TGCTATCAGCCGTTGTAATCATAACTGGTTGCTTCT...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACAGAAGCAACCAGTTATaGTTACAACGGCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYRSNQL*LQRLIA
Trigger: TGCTATCAGCCGTTGTAATCATAACTGGTTGCTTCT...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCTTCAACACAATTGGTTaGAAAGAAGGCAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLFNTIG*KEGNVP
Trigger: AGGAACATTGCCTTCTTTTCAACCAATTGTGTTGAA...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGAAAGAGACACCACTCTaGTTCTCTGTCGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKKETPL*FSVVSA
Trigger: AGCTGATACGACAGAGAATCAGAGTGGTGTCTCTTT...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp ATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTTCCTGTGCACACGGAGGCCCAACAGGTaGATTGGGAGGAAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: ILCIYRITSSNSSSFLCTRRPNR*IGRKPF
Trigger: GAACGGCTTCCTCCCAATTCACCTGTTGGGCCTCCG...TGTGCACAGGAAAGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS-3UTR GCA 90 bp CATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTTCCTGTGCACACCAAGTCGGCCCACTaGACCACCACGATACTGACG +
Preference number: 4 (lower is better)
Translates to: HSLHLPNNLFKQLFFPVHTKSAH*TTTILT
Trigger: CGTCAGTATCGTGGTGGTGCAGTGGGCCGACTTGGT...GTGCACAGGAAAGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS-3UTR CCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGTCTGGAGACCTAGTCTaGGGTTCTGATTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKSGDLV*GSDSPV
Trigger: CACTGGTGAATCAGAACCCCAGACTAGGTCTCCAGA...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGGCCCAGAAGCAAGTGTaGCAATTCTTCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKAQKQV*QFFPSQ
Trigger: CTGTGATGGGAAGAATTGCCACACTTGCTTCTGGGC...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTCGTCAGTGTCAAACTaGAACCCTTCAGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKSSVSN*NPSGNC
Trigger: ACAGTTTCCTGAAGGGTTCCAGTTTGACACTGACGA...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGTCTCGGGAATGTTACTaGTTAAGGTATAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLSRECY*LRYKQW
Trigger: CCATTGCTTATACCTTAACCAGTAACATTCCCGAGA...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTCTCGGGAATGTTACTaGTTAAGGTATAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSSRECY*LRYKQW
Trigger: CCATTGCTTATACCTTAACCAGTAACATTCCCGAGA...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCAAGTTTGTCTGTTTTaGGATTTCTGGGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFQVCLF*DFWAVS
Trigger: AGAGACAGCCCAGAAATCCCAAAACAGACAAACTTG...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCACAAGTTTGTCTGTTTTaGGATTTCTGGGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPQVCLF*DFWAVS
Trigger: AGAGACAGCCCAGAAATCCCAAAACAGACAAACTTG...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGTTCCATATTTACGATaGAGTTCATCAAGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQVPYLR*SSSRLS
Trigger: ACTTAGCCTTGATGAACTTCATCGTAAATATGGAAC...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGATCACAAGGGCTTGCTaGGGGACCATGTTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKITRAC*GTMFLK
Trigger: CTTCAAAAACATGGTCCCTCAGCAAGCCCTTGTGAT...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGAGCAAGCCAGGTAGCTaGAGTCTTGTCAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKSKPGS*SLVKRD
Trigger: GTCTCTTTTGACAAGACTTCAGCTACCTGGCTTGCT...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGGTGTTGGGGTTCTTATaGATAGACAACTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKVLGFL*IDNWYL
Trigger: CAAGTACCAGTTGTCTATTCATAAGAACCCCAACAC...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCACTTCCTCCGCATTTATaGTCATTTTCTCACCATTTC +
Preference number: 4 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPLPPHL*SFSHHF
Trigger: GAAATGGTGAGAAAATGAGCATAAATGCGGAGGAAG...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGTTCTTCCCATCACAGTaGGATCCCCAGTGTAGACAA +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKFFPSQ*DPQCRQ
Trigger: TTGTCTACACTGGGGATCGCACTGTGATGGGAAGAA...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTGCCTTCAACACAATTaGTTGAAAAGAAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQCLQHN*LKRRQC
Trigger: ACATTGCCTTCTTTTCAACCAATTGTGTTGAAGGCA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTTCCTGTGCACAAGCCTCCCAGGGCCTaGATCATTCCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HSLHLPNNLFKQLFFPVHKPPRA*IIPICP
Trigger: TGGGCAGATTGGAATGATCCAGGCCCTGGGAGGCTT...GTGCACAGGAAAGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS-3UTR TCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCTTCAACACAATTGGTTaGAAAGAAGGCAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFFNTIG*KEGNVP
Trigger: AGGAACATTGCCTTCTTTTCAACCAATTGTGTTGAA...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGAAAGAGACACCACTCTaGTTCTCTGTCGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKKETPL*FSVVSA
Trigger: AGCTGATACGACAGAGAATCAGAGTGGTGTCTCTTT...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp ATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTTCCTGTGCACATCCTGGTCTTACAGATaGCCAAGTCGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: ILCIYRITSSNSSSFLCTSWSYR*PSRPTA
Trigger: TGCAGTGGGCCGACTTGGTCATCTGTAAGACCAGGA...TGTGCACAGGAAAGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS-3UTR GCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGCACAGCACAGCTCTATaGACTTTAAGAGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKHSTAL*TLRVLT
Trigger: AGTCAGCACTCTTAAAGTGCATAGAGCTGTGCTGTG...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR GCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGAGCAACCCCAATGTCTaGTTTCTTCAAAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKSNPNV*FLQSWR
Trigger: TCTCCAGCTTTGAAGAAAGCAGACATTGGGGTTGCT...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACTGCCTTCAACACAATTaGTTGAAAAGAAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYCLQHN*LKRRQC
Trigger: ACATTGCCTTCTTTTCAACCAATTGTGTTGAAGGCA...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGACACCCGTGATGATGTaGATAAAATGTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQTPVMM*IKCSIS
Trigger: AGAAATTGAACATTTTATCCACATCATCACGGGTGT...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGGTATCTCGACGATTTTaGCGTATCTTTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKVSRRF*RIFLSS
Trigger: AGATGAGAGAAAGATACGCCAAAATCGTCGAGATAC...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGTCGTCAGTGTCAAACTaGAACCCTTCAGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKSSVSN*NPSGNC
Trigger: ACAGTTTCCTGAAGGGTTCCAGTTTGACACTGACGA...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTCTCGGGAATGTTACTaGTTAAGGTATAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKSRECY*LRYKQW
Trigger: CCATTGCTTATACCTTAACCAGTAACATTCCCGAGA...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTTCAACACAATTGGTTaGAAAGAAGGCAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKFNTIG*KEGNVP
Trigger: AGGAACATTGCCTTCTTTTCAACCAATTGTGTTGAA...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGGTGTTGGGGTTCTTATaGATAGACAACTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKVLGFL*IDNWYL
Trigger: CAAGTACCAGTTGTCTATTCATAAGAACCCCAACAC...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACACACCCGTGATGATGTaGATAAAATGTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYTPVMM*IKCSIS
Trigger: AGAAATTGAACATTTTATCCACATCATCACGGGTGT...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CCA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCACACCCGTGATGATGTaGATAAAATGTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFTPVMM*IKCSIS
Trigger: AGAAATTGAACATTTTATCCACATCATCACGGGTGT...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGGTTCCATATTTACGATaGAGTTCATCAAGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKVPYLR*SSSRLS
Trigger: ACTTAGCCTTGATGAACTTCATCGTAAATATGGAAC...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR TCA 90 bp TACTACAAAGACATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTGTCTTCCACATCGTTaGTCCAGCGGTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: YYKDILCIYRITSSNSSSCLPHR*SSGHPS
Trigger: ACTGGGATGACCGCTGGATCAACGATGTGGAAGACA...AGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAATGTCTTTGTAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS CCA 90 bp CACAGAGCAGCTCCCGGCCGAGCGAGCGGGACCAGGGGAGCCAAGTaGAGGGAGCTAGGGCTGCCGCGGGGCGGGAGGGTGGGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: HRAAPGRASGTRGAK*RELGLPRGGRVGGR
Trigger: CCGCCCTCCCACCCTCCCGCCCCGCGGCAGCCCTAGCTCCCTCCACTTGGCTCCCCTGGTCCCGCTCGCTCGGCCGGGAGCTGCTCTGTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295598.10
ENST00000488733.1
CDS CCA 90 bp GTAGGGCCCAGGAGGTCCGCAGTGGGTGCGGTACGGTCTCGGAACTaGGCTCCCCCAGTCGCCGCCGACCCGGCACCAGAAGTCGTGGGC +
Preference number: 5 (lower is better)
Translates to: VGPRRSAVGAVRSRN*APPVAADPAPEVVG
Trigger: GCCCACGACTTCTGGTGCCGGGTCGGCGGCGACTGGGGGAGCCCAGTTCCGAGACCGTACCGCACCCACTGCGGACCTCCTGGGCCCTAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS CCA 90 bp GGAACTGGGCTCCCCCAGTCGCCGCCGACCCGGCACCAGAAGTCGTaGGCGGAACGGCTTTTCCAGCGCTTCGGCGATCTCCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GTGLPQSPPTRHQKS*AERLFQRFGDLLWD
Trigger: GTCCCAGAGGAGATCGCCGAAGCGCTGGAAAAGCCGTTCCGCCCACGACTTCTGGTGCCGGGTCGGCGGCGACTGGGGGAGCCCAGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS GCA 90 bp TCTGGGACTCAGGGATGCTGGAGGGGGCTGGCGCTCGGGTGTGATTaGAGCCAGCGCCTGACTGAGGGACTCCGCCCCTCTGTGGAATCC +
Preference number: 5 (lower is better)
Translates to: SGTQGCWRGLALGCD*SQRLTEGLRPSVES
Trigger: GGATTCCACAGAGGGGCGGAGTCCCTCAGTCAGGCGCTGGCTGCAATCACACCCGAGCGCCAGCCCCCTCCAGCATCCCTGAGTCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS CCA 90 bp TCCCCATGGTGGCGGTGCTCAGTGCCCGGCGCCGGGTCCTGTCGCTaGAGAATCAGAGAGAAAAGCACAGAGCAGCTCCCGGCCGAGCGA +
Preference number: 5 (lower is better)
Translates to: SPWWRCSVPGAGSCR*RIREKSTEQLPAER
Trigger: TCGCTCGGCCGGGAGCTGCTCTGTGCTTTTCTCTCTGATTCTCCAGCGACAGGACCCGGCGCCGGGCACTGAGCACCGCCACCATGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295598.10
ENST00000488733.1
CDS GCA 90 bp AACGGCTTTTCCAGCGCTTCGGCGATCTCCTCTGGGACTCAGGGATaGTGGAGGGGGCTGGCGCTCGGGTGTGATTGCAGCCAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: NGFSSASAISSGTQG*WRGLALGCDCSQRL
Trigger: CAGGCGCTGGCTGCAATCACACCCGAGCGCCAGCCCCCTCCAGCATCCCTGAGTCCCAGAGGAGATCGCCGAAGCGCTGGAAAAGCCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS GCA 90 bp ACTTATCACGTCCAACTATGTAGGGCCCAGGAGGTCCGCAGTGGGTaGGGTACGGTCTCGGAACTGGGCTCCCCCAGTCGCCGCCGACCC +
Preference number: 5 (lower is better)
Translates to: TYHVQLCRAQEVRSG*GTVSELGSPSRRRP
Trigger: GGGTCGGCGGCGACTGGGGGAGCCCAGTTCCGAGACCGTACCGCACCCACTGCGGACCTCCTGGGCCCTACATAGTTGGACGTGATAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS-3UTR CAA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTTCCAGGGGCTGCTCCTaGCCGTGGAGGAGGATAGAG +
Preference number: 5 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRSRGCS*PWRRIE
Trigger: CTCTATCCTCCTCCACGGCAAGGAGCAGCCCCTGGA...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGATGTCAGCAGCTTGCTaGGACACATCTGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGMSAAC*DTSEPA
Trigger: TGCTGGCTCAGATGTGTCCAAGCAAGCTGCTGACAT...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACGGGGGAGTGAGGGCGTaGGGACCATCTCGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYGGVRA*GPSRAR
Trigger: CCTGGCGCGAGATGGTCCCAACGCCCTCACTCCCCC...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAGGGCTGCTACCGCTGTaGCCACGTGTCCGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPGLLPL*PRVRLL
Trigger: GAGGAGGCGGACACGTGGCAACAGCGGTAGCAGCCC...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295598.10
CDS-3UTR CAA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGAGCTGCCGACAAAACTaGATCCATTCAGGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGSCRQN*IHSGVV
Trigger: CACTACTCCTGAATGGATCAAGTTTTGTCGGCAGCT...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGCTCTTCTGTAGCAGCTaGGATGCTATAAGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGLFCSS*DAISQE
Trigger: TTCTTGGCTTATAGCATCCAAGCTGCTACAGAAGAG...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGGGTATCTCGACGATTTaGGCGTATCTTTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGGISTI*AYLSLI
Trigger: GATGAGAGAAAGATACGCCAAAATCGTCGAGATACC...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGCCAAATATCAAGATCTaGTTCTTCATCCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGPNIKI*FFIPCW
Trigger: CCAGCAGGGGATGAAGAACAAGATCTTGATATTTGG...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS CCA 90 bp GGCGCCTACGCTCCAGCATACCCCCAGTTGGCCTCTAAAGACAACTaGACTACAGCTGTGGCAGACCTGAGTGCTCAATGCAGTTCGCTG +
Preference number: 5 (lower is better)
Translates to: GAYAPAYPQLASKDN*TTAVADLSAQCSSL
Trigger: CAGCGAACTGCATTGAGCACTCAGGTCTGCCACAGCTGTAGTCCAGTTGTCTTTAGAGGCCAACTGGGGGTATGCTGGAGCGTAGGCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS CCA 90 bp TCCAACCTTAAAGGCCATCTTAGGGCAGTGAAGACACACCCTTTCTaGCACCAGCCCGCCCAGCCGGCTTCGCACTTAGAAGCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: SNLKGHLRAVKTHPF*HQPAQPASHLEAAS
Trigger: ACTGGCTGCTTCTAAGTGCGAAGCCGGCTGGGCGGGCTGGTGCCAGAAAGGGTGTGTCTTCACTGCCCTAAGATGGCCTTTAAGGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537345.5
CDS-3UTR CAA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGGGGGGAGTGAGGGCGTaGGGACCATCTCGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKGGVRA*GPSRAR
Trigger: CCTGGCGCGAGATGGTCCCAACGCCCTCACTCCCCC...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGGTACAGATTATCGTTTaGAGGTTCCTCTTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGVQIIV*RFLFCS
Trigger: GCTACAGAAGAGGAACCTCAAAACGATAATCTGTAC...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCTCCAGGGGCTGCTCCTaGCCGTGGAGGAGGATAGAG +
Preference number: 5 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFSRGCS*PWRRIE
Trigger: CTCTATCCTCCTCCACGGCAAGGAGCAGCCCCTGGA...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGCAGGACGGGGGCGCTCATTCACAAGTTaGTCTGTTTTGGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: GCRMQSVWPDAPRRAGRGRSFTS*SVLGFL
Trigger: CAGAAATCCCAAAACAGACAAACTTGTGAATGAGCG...CCCCCGTCCTGCACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCTCATTCCAGGACGTCTaGCTTCCCCACATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLSFQDV*LPHMLR
Trigger: CCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGA...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTGAGGAGTTATCCACCTaGCAGCCATTTGCAGATATG +
Preference number: 5 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRREELST*QPFADM
Trigger: CATATCTGCAAATGGCTGCAAGGTGGATAACTCCTC...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGCCAGCACTTCGACATTaGCCCACGGCATCAGGAACG +
Preference number: 5 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLPALRH*PTASGT
Trigger: CGTTCCTGATGCCGTGGGCAAATGTCGAAGTGCTGG...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTGGCTGACTGGGATGTaGAGGCGGGCAGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSWLTGM*RRAAMS
Trigger: AGACATTGCTGCCCGCCTCAACATCCCAGTCAGCCA...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGCCCAACAGGTGAATaGGGAGGAAGCCGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQGPTGE*GGSRSQ
Trigger: CTGAGAACGGCTTCCTCCCAATTCACCTGTTGGGCC...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGGGCCCAACAGGTGAATaGGGAGGAAGCCGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLGPTGE*GGSRSQ
Trigger: CTGAGAACGGCTTCCTCCCAATTCACCTGTTGGGCC...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGTCATTCCAGGACGTCTaGCTTCCCCACATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQSFQDV*LPHMLR
Trigger: CCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGA...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCATCACCAACAGGTGTaGGGGCTCCGATGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYHHQQV*GLRCVG
Trigger: CCCAACACATCGGAGCCCCAACACCTGTTGGTGATG...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCATGGCTGACTGGGATGTaGAGGCGGGCAGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPWLTGM*RRAAMS
Trigger: AGACATTGCTGCCCGCCTCAACATCCCAGTCAGCCA...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGCTGTCTTCCACATCGTaGATCCAGCGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLLSSTS*IQRSSQ
Trigger: CTGGGATGACCGCTGGATCAACGATGTGGAAGACAG...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACTCATTCCAGGACGTCTaGCTTCCCCACATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYSFQDV*LPHMLR
Trigger: CCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGA...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCATTCCTTGCCATGCGTTaGGCAGTAAGTGTCAGACAG +
Preference number: 5 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPFLAMR*AVSVRQ
Trigger: CTGTCTGACACTTACTGCCAAACGCATGGCAAGGAA...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGCCAGCACTTCGACATTaGCCCACGGCATCAGGAACG +
Preference number: 5 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKPALRH*PTASGT
Trigger: CGTTCCTGATGCCGTGGGCAAATGTCGAAGTGCTGG...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCATGTCAGCAGCTTGCTaGGACACATCTGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSMSAAC*DTSEPA
Trigger: TGCTGGCTCAGATGTGTCCAAGCAAGCTGCTGACAT...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCACGGCGTCGCTCATTCACAAGTTaGTCTGTTTTGGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: QRGGGCRMQSVWPDAPRRRSFTS*SVLGFL
Trigger: CAGAAATCCCAAAACAGACAAACTTGTGAATGAGCG...ACGCCGTGGAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGGGCCCAACAGGTGAATaGGGAGGAAGCCGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKGPTGE*GGSRSQ
Trigger: CTGAGAACGGCTTCCTCCCAATTCACCTGTTGGGCC...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCACTGTCTTCCACATCGTaGATCCAGCGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPLSSTS*IQRSSQ
Trigger: CTGGGATGACCGCTGGATCAACGATGTGGAAGACAG...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCTGTCTTCCACATCGTaGATCCAGCGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYLSSTS*IQRSSQ
Trigger: CTGGGATGACCGCTGGATCAACGATGTGGAAGACAG...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAGCTGCCGACAAAACTaGATCCATTCAGGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPSCRQN*IHSGVV
Trigger: CACTACTCCTGAATGGATCAAGTTTTGTCGGCAGCT...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCATCGAATCACAAGGGCTaGCTGAGGGACCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPSNHKG*LRDHVF
Trigger: AAAAACATGGTCCCTCAGCAAGCCCTTGTGATTCGA...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGAAACCTTCCGGCACATaGGCTACGATGATACCGATG +
Preference number: 5 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQKPSGT*ATMIPM
Trigger: CATCGGTATCATCGTAGCCAATGTGCCGGAAGGTTT...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGTTCCTTGCCATGCGTTaGGCAGTAAGTGTCAGACAG +
Preference number: 5 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLFLAMR*AVSVRQ
Trigger: CTGTCTGACACTTACTGCCAAACGCATGGCAAGGAA...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGGATAGCACCCTGTCTTaGGCAGCCTTCCACAATGAT +
Preference number: 5 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLDSTLS*AAFHND
Trigger: ATCATTGTGGAAGGCTGCCAAAGACAGGGTGCTATC...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACATGTCAGCAGCTTGCTaGGACACATCTGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYMSAAC*DTSEPA
Trigger: TGCTGGCTCAGATGTGTCCAAGCAAGCTGCTGACAT...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCAACCACCAGGTAGGTTaGAGGGGATACATCCTAAGA +
Preference number: 5 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLNHQVG*RGYILR
Trigger: TCTTAGGATGTATCCCCTCAAACCTACCTGGTGGTT...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS GCA 90 bp TCTAAAGACAACTGGACTACAGCTGTGGCAGACCTGAGTGCTCAATaGAGTTCGCTGTTGAGCAGTTCCATGGAGCTAGAGCCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: SKDNWTTAVADLSAQ*SSLLSSSMELEPVW
Trigger: CCACACAGGCTCTAGCTCCATGGAACTGCTCAACAGCGAACTGCATTGAGCACTCAGGTCTGCCACAGCTGTAGTCCAGTTGTCTTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS-3UTR CAA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCACTCTTCTGTAGCAGCTaGGATGCTATAAGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPLFCSS*DAISQE
Trigger: TTCTTGGCTTATAGCATCCAAGCTGCTACAGAAGAG...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCTTCCTTGCCATGCGTTaGGCAGTAAGTGTCAGACAG +
Preference number: 5 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFFLAMR*AVSVRQ
Trigger: CTGTCTGACACTTACTGCCAAACGCATGGCAAGGAA...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGCATCACCAACAGGTGTaGGGGCTCCGATGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKHHQQV*GLRCVG
Trigger: CCCAACACATCGGAGCCCCAACACCTGTTGGTGATG...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGTGGCTGACTGGGATGTaGAGGCGGGCAGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKWLTGM*RRAAMS
Trigger: AGACATTGCTGCCCGCCTCAACATCCCAGTCAGCCA...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACGATAGCACCCTGTCTTaGGCAGCCTTCCACAATGAT +
Preference number: 5 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYDSTLS*AAFHND
Trigger: ATCATTGTGGAAGGCTGCCAAAGACAGGGTGCTATC...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCGATAGCACCCTGTCTTaGGCAGCCTTCCACAATGAT +
Preference number: 5 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFDSTLS*AAFHND
Trigger: ATCATTGTGGAAGGCTGCCAAAGACAGGGTGCTATC...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCCCAAATATCAAGATCTaGTTCTTCATCCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLPNIKI*FFIPCW
Trigger: CCAGCAGGGGATGAAGAACAAGATCTTGATATTTGG...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AAGACTGAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGAACCACCAGGTAGGTTaGAGGGGATACATCCTAAGA +
Preference number: 5 (lower is better)
Translates to: KTEVHKEGVGVGCRVCGLNHQVG*RGYILR
Trigger: TCTTAGGATGTATCCCCTCAAACCTACCTGGTGGTT...CAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTCAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCAACCACCAGGTAGGTTaGAGGGGATACATCCTAAGA +
Preference number: 5 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSNHQVG*RGYILR
Trigger: TCTTAGGATGTATCCCCTCAAACCTACCTGGTGGTT...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS GCA 90 bp GAACACAGCCACACCCGTGATGATGTGGATAAAATGTTCAATTTCTaGAGCAATGGGGGTCTGGCCTCCTTCCAGCCCAGAAGCAAGTGT +
Preference number: 5 (lower is better)
Translates to: EHSHTRDDVDKMFNF*SNGGLASFQPRSKC
Trigger: ACACTTGCTTCTGGGCTGGAAGGAGGCCAGACCCCCATTGCTGCAGAAATTGAACATTTTATCCACATCATCACGGGTGTGGCTGTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000491156.1
ENST00000537345.5
CDS-3UTR CAA 90 bp GAAGTACACAAAGAGGGGGTGGGTGTCGGATGCAGAGTGTGTGGCCTGATGCTCGTACAGATTATCGTTTaGAGGTTCCTCTTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: EVHKEGVGVGCRVCGLMLVQIIV*RFLFCS
Trigger: GCTACAGAAGAGGAACCTCAAAACGATAATCTGTAC...GAGCATCAGGCCACACACTCTGCATCCGACACCCACCCCCTCTTTGTGTACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCATCGAATCACAAGGGCTaGCTGAGGGACCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPSNHKG*LRDHVF
Trigger: AAAAACATGGTCCCTCAGCAAGCCCTTGTGATTCGA...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCTCGAATCACAAGGGCTaGCTGAGGGACCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFSNHKG*LRDHVF
Trigger: AAAAACATGGTCCCTCAGCAAGCCCTTGTGATTCGA...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAGAGGAGTTATCCACCTaGCAGCCATTTGCAGATATG +
Preference number: 5 (lower is better)
Translates to: LLPHMLRCFPTRVEFQTPEELST*QPFADM
Trigger: CATATCTGCAAATGGCTGCAAGGTGGATAACTCCTC...TGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCGGTATCTCGACGATTTaGGCGTATCTTTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: ATCFIPGRLASPHAAVLSGISTI*AYLSLI
Trigger: GATGAGAGAAAGATACGCCAAAATCGTCGAGATACC...GGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGACAAGTTTGTCTGTTTaGGGATTTCTGGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQTSLSV*GFLGCL
Trigger: GAGACAGCCCAGAAATCCCAAAACAGACAAACTTGT...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCTCTTCTGTAGCAGCTaGGATGCTATAAGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYLFCSS*DAISQE
Trigger: TTCTTGGCTTATAGCATCCAAGCTGCTACAGAAGAG...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGTACAGATTATCGTTTaGAGGTTCCTCTTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQVQIIV*RFLFCS
Trigger: GCTACAGAAGAGGAACCTCAAAACGATAATCTGTAC...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCACTTCAACACAATTGGTaGAAAAGAAGGCAATGTTCC +
Preference number: 5 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPLQHNW*KRRQCS
Trigger: GGAACATTGCCTTCTTTTCAACCAATTGTGTTGAAG...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp TGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGTGCCTTCAACACAATaGGTTGAAAAGAAGGCAATG +
Preference number: 5 (lower is better)
Translates to: CFIPGRLASPHAAVLSYQVPSTQ*VEKKAM
Trigger: CATTGCCTTCTTTTCAACCAATTGTGTTGAAGGCAC...CTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp GGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAACAATTGAGGCAAAGTaGTCATCCAGAAGAATCATG +
Preference number: 5 (lower is better)
Translates to: GRLASPHAAVLSYQGRVPTIEAK*SSRRIM
Trigger: CATGATTCTTCTGGATGACAACTTTGCCTCAATTGT...TGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp ACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCCTACACAAGTTTGTCTGTTTaGGGATTTCTGGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: TCFIPGRLASPHAAVLSYTSLSV*GFLGCL
Trigger: GAGACAGCCCAGAAATCCCAAAACAGACAAACTTGT...GTAGGAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS TCA 90 bp CCTGCAACTGCCCGCTTAAGAATAGGTAGGTTTTCCTGGTTAGCCTaGAACACTGCCCTGTTACAAAGACCTGCAATTCTGGACAGAGCA +
Preference number: 5 (lower is better)
Translates to: PATARLRIGRFSWLA*NTALLQRPAILDRA
Trigger: TGCTCTGTCCAGAATTGCAGGTCTTTGTAACAGGGCAGTGTTTCAGGCTAACCAGGAAAACCTACCTATTCTTAAGCGGGCAGTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGGGTATCTCGACGATTTaGGCGTATCTTTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKGISTI*AYLSLI
Trigger: GATGAGAGAAAGATACGCCAAAATCGTCGAGATACC...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGTACACAAAGGAGGAGTTATCCACCTaGCAGCCATTTGCAGATATG +
Preference number: 5 (lower is better)
Translates to: RCFPTRVEFQTPRLKYTKEELST*QPFADM
Trigger: CATATCTGCAAATGGCTGCAAGGTGGATAACTCCTC...CTTTGTGTACTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGGTGCCTTCAACACAATaGGTTGAAAAGAAGGCAATG +
Preference number: 5 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKVPSTQ*VEKKAM
Trigger: CATTGCCTTCTTTTCAACCAATTGTGTTGAAGGCAC...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AGCTACATGCTTCATTCCAGGACGTCTTGCTTCCCCACATGCTGCGGTGCTTTCACAATTGAGGCAAAGTaGTCATCCAGAAGAATCATG +
Preference number: 5 (lower is better)
Translates to: SYMLHSRTSCFPTCCGAFTIEAK*SSRRIM
Trigger: CATGATTCTTCTGGATGACAACTTTGCCTCAATTGT...GAAAGCACCGCAGCATGTGGGGAAGCAAGACGTCCTGGAATGAAGCATGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGCGCTCATTCACAAGTTaGTCTGTTTTGGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKRSFTS*SVLGFL
Trigger: CAGAAATCCCAAAACAGACAAACTTGTGAATGAGCG...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp CATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTTCCTGTGCACCTGTCTTCCACATCGTaGATCCAGCGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: HSLHLPNNLFKQLFFPVHLSSTS*IQRSSQ
Trigger: CTGGGATGACCGCTGGATCAACGATGTGGAAGACAG...GTGCACAGGAAAGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS CCA 90 bp CAATGCAGTTCGCTGTTGAGCAGTTCCATGGAGCTAGAGCCTGTGTaGCTTTATCTTATCTTGGGCCAAATCCTAAACACTAGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: QCSSLLSSSMELEPV*LYLILGQILNTSCY
Trigger: ATAGCAGCTAGTGTTTAGGATTTGGCCCAAGATAAGATAAAGCCACACAGGCTCTAGCTCCATGGAACTGCTCAACAGCGAACTGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS-3UTR CAA 90 bp CACATGCTGCGGTGCTTTCCTACCAGGGTAGAGTTCCAAACTCCAAGACTGAAGCTTCAACACAATTGGTaGAAAAGAAGGCAATGTTCC +
Preference number: 5 (lower is better)
Translates to: HMLRCFPTRVEFQTPRLKLQHNW*KRRQCS
Trigger: GGAACATTGCCTTCTTTTCAACCAATTGTGTTGAAG...CTTCAGTCTTGGAGTTTGGAACTCTACCCTGGTAGGAAAGCACCGCAGCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS-3UTR CAA 90 bp AAAGACATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTTCCTGGGCCCAACAGGTGAATaGGGAGGAAGCCGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: KDILCIYRITSSNSSSFLGPTGE*GGSRSQ
Trigger: CTGAGAACGGCTTCCTCCCAATTCACCTGTTGGGCC...CAGGAAAGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAATGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS CCA 90 bp AAGCACAGATTATCGATAGGGAAATTCACATCGTCAGTGTCAAACTaGAACCCTTCAGGAAACTGTTCATCTGGCAGAAAGAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KHRLSIGKFTSSVSN*NPSGNCSSGRKRWQ
Trigger: CTGCCACCTCTTTCTGCCAGATGAACAGTTTCCTGAAGGGTTCCAGTTTGACACTGACGATGTGAATTTCCCTATCGATAATCTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS CCA 90 bp AAAAGGTCAAGGCATAAGCATGGCTTTGAAGCCAACTGCAAGTCCTaGTGTTCCCACTTACTGGCTCTCAACTGCTATAAAATAGGGAAA +
Preference number: 5 (lower is better)
Translates to: KRSRHKHGFEANCKS*CSHLLALNCYKIGK
Trigger: TTTCCCTATTTTATAGCAGTTGAGAGCCAGTAAGTGGGAACACCAGGACTTGCAGTTGGCTTCAAAGCCATGCTTATGCCTTGACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488733.1
CDS GCA 90 bp TTTATCATCAAAAGGTCAAGGCATAAGCATGGCTTTGAAGCCAACTaGAAGTCCTGGTGTTCCCACTTACTGGCTCTCAACTGCTATAAA +
Preference number: 5 (lower is better)
Translates to: FIIKRSRHKHGFEAN*KSWCSHLLALNCYK
Trigger: TTTATAGCAGTTGAGAGCCAGTAAGTGGGAACACCAGGACTTGCAGTTGGCTTCAAAGCCATGCTTATGCCTTGACCTTTTGATGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488733.1
CDS-3UTR CAA 90 bp GACATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTTCCTGTGCCCAAATATCAAGATCTaGTTCTTCATCCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: DILCIYRITSSNSSSFLCPNIKI*FFIPCW
Trigger: CCAGCAGGGGATGAAGAACAAGATCTTGATATTTGG...GCACAGGAAAGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS TCA 90 bp ACGTCCAACCTTTTTAACTTCTGTGGTCACGTGTGCAGCACTACTTaGCTAATAACTTCTTCCAACTGGGTGGGTTCTTTAGTTTCTATC +
Preference number: 5 (lower is better)
Translates to: TSNLFNFCGHVCSTT*LITSSNWVGSLVSI
Trigger: GATAGAAACTAAAGAACCCACCCAGTTGGAAGAAGTTATTAGTCAAGTAGTGCTGCACACGTGACCACAGAAGTTAAAAAGGTTGGACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369494.5
CDS-3UTR CAA 90 bp GACATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTTCCTGTGCCGCTCATTCACAAGTTaGTCTGTTTTGGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: DILCIYRITSSNSSSFLCRSFTS*SVLGFL
Trigger: CAGAAATCCCAAAACAGACAAACTTGTGAATGAGCG...GCACAGGAAAGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS-3UTR CAA 90 bp AAAGACATTCTCTGCATTTACCGAATAACCTCTTCAAACAGCTCTTCTTTCCTGTACTGCGTCAGAGTCTaGAGGGGATACATCCTAAGA +
Preference number: 5 (lower is better)
Translates to: KDILCIYRITSSNSSSFLYCVRV*RGYILR
Trigger: TCTTAGGATGTATCCCCTCAAGACTCTGACGCAGTA...CAGGAAAGAAGAGCTGTTTGAAGAGGTTATTCGGTAAATGCAGAGAATGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440951.1
CDS CCA 90 bp CAAACGACTGTAATAAGGGCTATGGGAGTTATGAACCAGGAACTGTaGACAAAAACCAATATATATCAGAATACCACAGTACCCATGTCT +
Preference number: 5 (lower is better)
Translates to: QTTVIRAMGVMNQEL*TKTNIYQNTTVPMS
Trigger: AGACATGGGTACTGTGGTATTCTGATATATATTGGTTTTTGTCCACAGTTCCTGGTTCATAACTCCCATAGCCCTTATTACAGTCGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488733.1
CDS GCA 90 bp CAAAAGCTTGCTCGCCAGTTTAAGAGATATTGCTGTTACATGGTGTaGCTGTATTCAGAGTTTACATTCAAAAGAAAGGCTACCACTTTT +
Preference number: 5 (lower is better)
Translates to: QKLARQFKRYCCYMV*LYSEFTFKRKATTF
Trigger: AAAAGTGGTAGCCTTTCTTTTGAATGTAAACTCTGAATACAGGCACACCATGTAACAGCAATATCTCTTAAACTGGCGAGCAAGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463382.1
CDS CCA 90 bp AGTTACAAAAGCTTGCTCGCCAGTTTAAGAGATATTGCTGTTACATaGTGTGCCTGTATTCAGAGTTTACATTCAAAAGAAAGGCTACCA +
Preference number: 5 (lower is better)
Translates to: SYKSLLASLRDIAVT*CACIQSLHSKERLP
Trigger: TGGTAGCCTTTCTTTTGAATGTAAACTCTGAATACAGGCACACCATGTAACAGCAATATCTCTTAAACTGGCGAGCAAGCTTTTGTAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463382.1
CDS TCA 90 bp ATATATATCAGAATACCACAGTACCCATGTCTCTTGATGCCTTACTaGAAAAATGCTACATATTGGCTTGCTATTCAAGTTATTCCCAGA +
Preference number: 5 (lower is better)
Translates to: IYIRIPQYPCLLMPY*KNATYWLAIQVIPR
Trigger: TCTGGGAATAACTTGAATAGCAAGCCAATATGTAGCATTTTTTCAGTAAGGCATCAAGAGACATGGGTACTGTGGTATTCTGATATATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488733.1
CDS CAA 90 bp GGGTGGGAGGGCGGCCGGCGGCTCGGGCCGATGCCGCCGCCGCTGTaGCTGCCGCCGCCCGGGCTGCTACCGCTGTTGCCACGTGTCCGC +
Preference number: 6 (lower is better)
Translates to: GWEGGRRLGPMPPPL*LPPPGLLPLLPRVR
Trigger: GCGGACACGTGGCAACAGCGGTAGCAGCCCGGGCGGCGGCAGCAACAGCGGCGGCGGCATCGGCCCGAGCCGCCGGCCGCCCTCCCACCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295598.10
ENST00000488733.1
CDS CCA 72 bp GCTCCCGGCCGAGCGAGCGGGACCAGGGGAGCCAAGTaGAGGGAGCTAGGGCTGCCGCGGGGCGGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: APGRASGTRGAK*RELGLPRGGRV
Trigger: CACCCTCCCGCCCCGCGGCAGCCCTAGCTCCCTCCACTTGGCTCCCCTGGTCCCGCTCGCTCGGCCGGGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295598.10
ENST00000488733.1
CDS CCA 72 bp AGGAGGTCCGCAGTGGGTGCGGTACGGTCTCGGAACTaGGCTCCCCCAGTCGCCGCCGACCCGGCACCAGAA +
Preference number: 6 (lower is better)
Translates to: RRSAVGAVRSRN*APPVAADPAPE
Trigger: TTCTGGTGCCGGGTCGGCGGCGACTGGGGGAGCCCAGTTCCGAGACCGTACCGCACCCACTGCGGACCTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS TCA 72 bp GGGGGCTGGCGCTCGGGTGTGATTGCAGCCAGCGCCTaGCTGAGGGACTCCGCCCCTCTGTGGAATCCAGGC +
Preference number: 6 (lower is better)
Translates to: GGWRSGVIAASA*LRDSAPLWNPG
Trigger: GCCTGGATTCCACAGAGGGGCGGAGTCCCTCAGTCAGGCGCTGGCTGCAATCACACCCGAGCGCCAGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS GCA 72 bp CAGGGATGCTGGAGGGGGCTGGCGCTCGGGTGTGATTaGAGCCAGCGCCTGACTGAGGGACTCCGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: QGCWRGLALGCD*SQRLTEGLRPS
Trigger: AGAGGGGCGGAGTCCCTCAGTCAGGCGCTGGCTGCAATCACACCCGAGCGCCAGCCCCCTCCAGCATCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS CCA 72 bp CTCCCCCAGTCGCCGCCGACCCGGCACCAGAAGTCGTaGGCGGAACGGCTTTTCCAGCGCTTCGGCGATCTC +
Preference number: 6 (lower is better)
Translates to: LPQSPPTRHQKS*AERLFQRFGDL
Trigger: GAGATCGCCGAAGCGCTGGAAAAGCCGTTCCGCCCACGACTTCTGGTGCCGGGTCGGCGGCGACTGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS CCA 72 bp GCGGAACGGCTTTTCCAGCGCTTCGGCGATCTCCTCTaGGACTCAGGGATGCTGGAGGGGGCTGGCGCTCGG +
Preference number: 6 (lower is better)
Translates to: AERLFQRFGDLL*DSGMLEGAGAR
Trigger: CCGAGCGCCAGCCCCCTCCAGCATCCCTGAGTCCCAGAGGAGATCGCCGAAGCGCTGGAAAAGCCGTTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS GCA 72 bp ACTTATCACGTCCAACCCCCTTCCCCATGGTGGCGGTaGTCAGTGCCCGGCGCCGGGTCCTGTCGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: TYHVQPPSPWWR*SVPGAGSCRWR
Trigger: TCTCCAGCGACAGGACCCGGCGCCGGGCACTGAGCACCGCCACCATGGGGAAGGGGGTTGGACGTGATAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295598.10
ENST00000488733.1
CDS GCA 72 bp TCCAGCGCTTCGGCGATCTCCTCTGGGACTCAGGGATaGTGGAGGGGGCTGGCGCTCGGGTGTGATTGCAGC +
Preference number: 6 (lower is better)
Translates to: SSASAISSGTQG*WRGLALGCDCS
Trigger: GCTGCAATCACACCCGAGCGCCAGCCCCCTCCAGCATCCCTGAGTCCCAGAGGAGATCGCCGAAGCGCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418797.5
CDS CCA 72 bp AAAGGCCATCTTAGGGCAGTGAAGACACACCCTTTCTaGCACCAGCCCGCCCAGCCGGCTTCGCACTTAGAA +
Preference number: 6 (lower is better)
Translates to: KGHLRAVKTHPF*HQPAQPASHLE
Trigger: TTCTAAGTGCGAAGCCGGCTGGGCGGGCTGGTGCCAGAAAGGGTGTGTCTTCACTGCCCTAAGATGGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537345.5
CDS CAA 72 bp TTGAGCCTGGGCGCCTACGCTCCAGCATACCCCCAGTaGGCCTCTAAAGACAACTGGACTACAGCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: LSLGAYAPAYPQ*ASKDNWTTAVA
Trigger: TGCCACAGCTGTAGTCCAGTTGTCTTTAGAGGCCAACTGGGGGTATGCTGGAGCGTAGGCGCCCAGGCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS CAA 72 bp GCTGTGGCAGACCTGAGTGCTCAATGCAGTTCGCTGTaGAGCAGTTCCATGGAGCTAGAGCCTGTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: AVADLSAQCSSL*SSSMELEPVWL
Trigger: AAGCCACACAGGCTCTAGCTCCATGGAACTGCTCAACAGCGAACTGCATTGAGCACTCAGGTCTGCCACAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS CAA 90 bp AATCAAGATTTGAGCCTGGGCGCCTACGCTCCAGCATACCCCCAGTaGGCCTCTAAAGACAACTGGACTACAGCTGTGGCAGACCTGAGT +
Preference number: 6 (lower is better)
Translates to: NQDLSLGAYAPAYPQ*ASKDNWTTAVADLS
Trigger: ACTCAGGTCTGCCACAGCTGTAGTCCAGTTGTCTTTAGAGGCCAACTGGGGGTATGCTGGAGCGTAGGCGCCCAGGCTCAAATCTTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS GCA 72 bp AACTGGACTACAGCTGTGGCAGACCTGAGTGCTCAATaGAGTTCGCTGTTGAGCAGTTCCATGGAGCTAGAG +
Preference number: 6 (lower is better)
Translates to: NWTTAVADLSAQ*SSLLSSSMELE
Trigger: CTCTAGCTCCATGGAACTGCTCAACAGCGAACTGCATTGAGCACTCAGGTCTGCCACAGCTGTAGTCCAGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS CAA 90 bp TGGACTACAGCTGTGGCAGACCTGAGTGCTCAATGCAGTTCGCTGTaGAGCAGTTCCATGGAGCTAGAGCCTGTGTGGCTTTATCTTATC +
Preference number: 6 (lower is better)
Translates to: WTTAVADLSAQCSSL*SSSMELEPVWLYLI
Trigger: GATAAGATAAAGCCACACAGGCTCTAGCTCCATGGAACTGCTCAACAGCGAACTGCATTGAGCACTCAGGTCTGCCACAGCTGTAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS CCA 72 bp GCTGTCAAGTCATCCACTGGGGAAGGACAAAGCGTCTaGTACCTGAGGGACCATGTTTTTGAAGGATTCCAT +
Preference number: 6 (lower is better)
Translates to: AVKSSTGEGQSV*YLRDHVFEGFH
Trigger: ATGGAATCCTTCAAAAACATGGTCCCTCAGGTACCAGACGCTTTGTCCTTCCCCAGTGGATGACTTGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463382.1
CDS CAA 72 bp AAGTTCTTCACTAAGCAGTTTTTCCTTGCCATGCGTTaGGCAGTAAGTGTCAGACAGACCGTGACAGTGGCC +
Preference number: 6 (lower is better)
Translates to: KFFTKQFFLAMR*AVSVRQTVTVA
Trigger: GGCCACTGTCACGGTCTGTCTGACACTTACTGCCAAACGCATGGCAAGGAAAAACTGCTTAGTGAAGAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS CAA 90 bp ACAGCTTCTAAGTTCTTCACTAAGCAGTTTTTCCTTGCCATGCGTTaGGCAGTAAGTGTCAGACAGACCGTGACAGTGGCCAGCAAACCT +
Preference number: 6 (lower is better)
Translates to: TASKFFTKQFFLAMR*AVSVRQTVTVASKP
Trigger: AGGTTTGCTGGCCACTGTCACGGTCTGTCTGACACTTACTGCCAAACGCATGGCAAGGAAAAACTGCTTAGTGAAGAACTTAGAAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS CAA 90 bp TTGAGCAGTTCCATGGAGCTAGAGCCTGTGTGGCTTTATCTTATCTaGGGCCAAATCCTAAACACTAGCTGCTATCATGGAAGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: LSSSMELEPVWLYLI*GQILNTSCYHGSLR
Trigger: CCTGAGGCTTCCATGATAGCAGCTAGTGTTTAGGATTTGGCCCAAGATAAGATAAAGCCACACAGGCTCTAGCTCCATGGAACTGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS CAA 90 bp GGGTCCCCTTGTCAAAAGCTAAAGTCTCAGAGTGTTTCAAATCTTTaGCATCAGGAAATGCCCATGACCTTCATCGCAGCAGCGTATGTG +
Preference number: 6 (lower is better)
Translates to: GSPCQKLKSQSVSNL*HQEMPMTFIAAAYV
Trigger: CACATACGCTGCTGCGATGAAGGTCATGGGCATTTCCTGATGCAAAAGATTTGAAACACTCTGAGACTTTAGCTTTTGACAAGGGGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495965.1
CDS TCA 72 bp GCCCGCTTAAGAATAGGTAGGTTTTCCTGGTTAGCCTaGAACACTGCCCTGTTACAAAGACCTGCAATTCTG +
Preference number: 6 (lower is better)
Translates to: ARLRIGRFSWLA*NTALLQRPAIL
Trigger: CAGAATTGCAGGTCTTTGTAACAGGGCAGTGTTTCAGGCTAACCAGGAAAACCTACCTATTCTTAAGCGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS CAA 72 bp AACCTTAACTTCACACTAATTCACAGGCTGACATGCTaGGGGCTGTCAAGTCATCCACTGGGGAAGGACAAA +
Preference number: 6 (lower is better)
Translates to: NLNFTLIHRLTC*GLSSHPLGKDK
Trigger: TTTGTCCTTCCCCAGTGGATGACTTGACAGCCCCAAGCATGTCAGCCTGTGAATTAGTGTGAAGTTAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463382.1
CDS CAA 72 bp TCCATGGAGCTAGAGCCTGTGTGGCTTTATCTTATCTaGGGCCAAATCCTAAACACTAGCTGCTATCATGGA +
Preference number: 6 (lower is better)
Translates to: SMELEPVWLYLI*GQILNTSCYHG
Trigger: TCCATGATAGCAGCTAGTGTTTAGGATTTGGCCCAAGATAAGATAAAGCCACACAGGCTCTAGCTCCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS CCA 72 bp TTATCGATAGGGAAATTCACATCGTCAGTGTCAAACTaGAACCCTTCAGGAAACTGTTCATCTGGCAGAAAG +
Preference number: 6 (lower is better)
Translates to: LSIGKFTSSVSN*NPSGNCSSGRK
Trigger: CTTTCTGCCAGATGAACAGTTTCCTGAAGGGTTCCAGTTTGACACTGACGATGTGAATTTCCCTATCGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295598.10
ENST00000369496.8
ENST00000537345.5
CDS CAA 72 bp CAGATTATCGTTTTGAGGTTCCTCTTCTGTAGCAGCTaGGATGCTATAAGCCAAGAAACAAAGAATCGCTCC +
Preference number: 6 (lower is better)
Translates to: QIIVLRFLFCSS*DAISQETKNRS
Trigger: GGAGCGATTCTTTGTTTCTTGGCTTATAGCATCCAAGCTGCTACAGAAGAGGAACCTCAAAACGATAATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295598.10
ENST00000369494.5
ENST00000369496.8
ENST00000418797.5
ENST00000463382.1
ENST00000537345.5
CDS CAA 72 bp TTCATACTTTTTGGAGCTACCAGAGGATCAACTTACTaGAGGGGATACATCCTAAGAGCAACACCCATTCCA +
Preference number: 6 (lower is better)
Translates to: FILFGATRGSTY*RGYILRATPIP
Trigger: TGGAATGGGTGTTGCTCTTAGGATGTATCCCCTCAAGTAAGTTGATCCTCTGGTAGCTCCAAAAAGTATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479960.1
CDS TCA 72 bp CTTTTTAACTTCTGTGGTCACGTGTGCAGCACTACTTaGCTAATAACTTCTTCCAACTGGGTGGGTTCTTTA +
Preference number: 6 (lower is better)
Translates to: LFNFCGHVCSTT*LITSSNWVGSL
Trigger: TAAAGAACCCACCCAGTTGGAAGAAGTTATTAGTCAAGTAGTGCTGCACACGTGACCACAGAAGTTAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369494.5
CDS CAA 72 bp TGTCAAAAGCTAAAGTCTCAGAGTGTTTCAAATCTTTaGCATCAGGAAATGCCCATGACCTTCATCGCAGCA +
Preference number: 6 (lower is better)
Translates to: CQKLKSQSVSNL*HQEMPMTFIAA
Trigger: TGCTGCGATGAAGGTCATGGGCATTTCCTGATGCAAAAGATTTGAAACACTCTGAGACTTTAGCTTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495965.1
CDS TCA 72 bp AATGCTGAGGTTTTCTCACTGTCAAAATTCACCACGTaGTGTGGCTCTCAAGAAGAACTATATCAAACATCC +
Preference number: 6 (lower is better)
Translates to: NAEVFSLSKFTT*CGSQEELYQTS
Trigger: GGATGTTTGATATAGTTCTTCTTGAGAGCCACATCACGTGGTGAATTTTGACAGTGAGAAAACCTCAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491156.1
CDS CCA 72 bp AGCTTGCTCGCCAGTTTAAGAGATATTGCTGTTACATaGTGTGCCTGTATTCAGAGTTTACATTCAAAAGAA +
Preference number: 6 (lower is better)
Translates to: SLLASLRDIAVT*CACIQSLHSKE
Trigger: TTCTTTTGAATGTAAACTCTGAATACAGGCACACCATGTAACAGCAATATCTCTTAAACTGGCGAGCAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463382.1
CDS TCA 72 bp AGAATACCACAGTACCCATGTCTCTTGATGCCTTACTaGAAAAATGCTACATATTGGCTTGCTATTCAAGTT +
Preference number: 6 (lower is better)
Translates to: RIPQYPCLLMPY*KNATYWLAIQV
Trigger: AACTTGAATAGCAAGCCAATATGTAGCATTTTTTCAGTAAGGCATCAAGAGACATGGGTACTGTGGTATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488733.1