RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP13A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000133657

Ensembl transcript IDs: ENST00000429136.6, ENST00000439040.5, ENST00000446356.1, ENST00000461660.1, ENST00000484023.1, ENST00000485194.1, ENST00000492983.1, ENST00000497567.1, ENST00000642744.1, ENST00000645319.2, ENST00000645538.1, ENST00000645621.1

Found 596 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACAGGAGCCATTTAAGAGCTTTGAGAGGCGTCTCAAGAAGGCAGTaGAGCACCTTGCTGATTAGAAAAATAAAACCCAGGCAGTTTGTA +
Preference number: 1 (lower is better)
Translates to: HRSHLRALRGVSRRQ*STLLIRKIKPRQFV
Trigger: TACAAACTGCCTGGGTTTTATTTTTCTAATCAGCAAGGTGCTTCACTGCCTTCTTGAGACGCCTCTCAAAGCTCTTAAATGGCTCCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR TCA 90 bp CAAATATGCTCATTTGTAACGATCCAATTCAAAATAGACATGTTCTaGCCTCTGGCGCCACCTAATGGCATAAAACAAACTCATCAAATT +
Preference number: 1 (lower is better)
Translates to: QICSFVTIQFKIDMF*PLAPPNGIKQTHQI
Trigger: AATTTGATGAGTTTGTTTTATGCCATTAGGTGGCGCCAGAGGTCAGAACATGTCTATTTTGAATTGGATCGTTACAAATGAGCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR GCA 90 bp TATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTaGAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACAT +
Preference number: 1 (lower is better)
Translates to: YLFCCWLSHLYSSII*SIALQQLVLEDTKH
Trigger: ATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGTCTCAAGAAGGCAGTaGAGCACCTTGCTGATTAGA +
Preference number: 2 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCVSRRQ*STLLIR
Trigger: TCTAATCAGCAAGGTGCTTCACTGCCTTCTTGAGAC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGAACTAGTGCCATTCTaGCACACAGGATCAGAAACT +
Preference number: 2 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCELVPF*HTGSET
Trigger: AGTTTCTGATCCTGTGTGTCAGAATGGCACTAGTTC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGGTAACTGTGGGCGTTaGCAGACTGCTGGATCCACC +
Preference number: 2 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLGNCGR*QTAGST
Trigger: GGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTAGAAGGGACATAAACTaGACTAGTGCCATTCTGACA +
Preference number: 2 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFRRDIN*TSAILT
Trigger: TGTCAGAATGGCACTAGTTCAGTTTATGTCCCTTCT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGTCTCAAGAAGGCAGTaGAGCACCTTGCTGATTAGA +
Preference number: 2 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNVSRRQ*STLLIR
Trigger: TCTAATCAGCAAGGTGCTTCACTGCCTTCTTGAGAC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGTTATGGTGATGATTTaGCATGATCCATTCTCCTTA +
Preference number: 2 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCVMVMI*HDPFSL
Trigger: TAAGGAGAATGGATCATGTCAAATCATCACCATAAC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429136.6
3UTR-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTATTTGGGTTGCTGAATaGAGATATAGGACTTTATGG +
Preference number: 2 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCIWVAE*RYRTLW
Trigger: CCATAAAGTCCTATATCTTCATTCAGCAACCCAAAT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTAGAAACGTTAAAAGATaGATCTACATCTACTGCCGA +
Preference number: 2 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCRNVKR*IYIYCR
Trigger: TCGGCAGTAGATGTAGATTCATCTTTTAACGTTTCT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACAAAATAGACATGTTCTaGCCTCTGGCGCCACCTAAT +
Preference number: 2 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNKIDMF*PLAPPN
Trigger: ATTAGGTGGCGCCAGAGGTCAGAACATGTCTATTTT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATGGTAACTGTGGGCGTTaGCAGACTGCTGGATCCACC +
Preference number: 2 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYGNCGR*QTAGST
Trigger: GGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACC...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACAGAAGGGACATAAACTaGACTAGTGCCATTCTGACA +
Preference number: 2 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNRRDIN*TSAILT
Trigger: TGTCAGAATGGCACTAGTTCAGTTTATGTCCCTTCT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTATTTGGGTTGCTGAATaGAGATATAGGACTTTATGG +
Preference number: 2 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFIWVAE*RYRTLW
Trigger: CCATAAAGTCCTATATCTTCATTCAGCAACCCAAAT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTAGAAACGTTAAAAGATaGATCTACATCTACTGCCGA +
Preference number: 2 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFRNVKR*IYIYCR
Trigger: TCGGCAGTAGATGTAGATTCATCTTTTAACGTTTCT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCCGCATCAAATATaGTCATTTGTAACGATCCAA +
Preference number: 2 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCFPHQI*SFVTIQ
Trigger: TTGGATCGTTACAAATGAGCATATTTGATGCGGAAA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCATCATCCAGGTCTTTaGAGCATAAAGAGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNHHPGL*SIKSEN
Trigger: GTTCTCACTCTTTATGCTGCAAAGACCTGGATGATG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACATTTGGGTTGCTGAATaGAGATATAGGACTTTATGG +
Preference number: 2 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNIWVAE*RYRTLW
Trigger: CCATAAAGTCCTATATCTTCATTCAGCAACCCAAAT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTAAAATAGACATGTTCTaGCCTCTGGCGCCACCTAAT +
Preference number: 2 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLKIDMF*PLAPPN
Trigger: ATTAGGTGGCGCCAGAGGTCAGAACATGTCTATTTT...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCCTGAGACTGATTCACTaGTATGTTATGGTGATGATT +
Preference number: 2 (lower is better)
Translates to: EQACYWLWKNREQCHTVFLRLIH*YVMVMI
Trigger: AATCATCACCATAACATAGCAGTGAATCAGTCTCAG...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429136.6
3UTR-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCAGTAGAACCCACACCTaGCTTCACAGGCATTCTTCA +
Preference number: 2 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGSRTHT*LHRHSS
Trigger: TGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCGAACTAGTGCCATTCTaGCACACAGGATCAGAAACT +
Preference number: 2 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGELVPF*HTGSET
Trigger: AGTTTCTGATCCTGTGTGTCAGAATGGCACTAGTTC...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGTCTCAAGAAGGCAGTaGAGCACCTTGCTGATTAGA +
Preference number: 2 (lower is better)
Translates to: FLPEISASNMLICNDPIQVSRRQ*STLLIR
Trigger: TCTAATCAGCAAGGTGCTTCACTGCCTTCTTGAGAC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGTCTCAAGAAGGCAGTaGAGCACCTTGCTGATTAGA +
Preference number: 2 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSVSRRQ*STLLIR
Trigger: TCTAATCAGCAAGGTGCTTCACTGCCTTCTTGAGAC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTTTCCGCATCAAATATaGTCATTTGTAACGATCCAA +
Preference number: 2 (lower is better)
Translates to: EQACYWLWKNREQCHTVFFPHQI*SFVTIQ
Trigger: TTGGATCGTTACAAATGAGCATATTTGATGCGGAAA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCTTCGATTATATTTTTaGAGGAATCATCAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNLRLYF*RNHQWQ
Trigger: TTGCCACTGATGATTCCTGCAAAAATATAATCGAAG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGCATGTTACTGGCTCTaGAAGAACAGAGAACAATGT +
Preference number: 2 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLACYWL*KNREQC
Trigger: ACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATAGTAGAACCCACACCTaGCTTCACAGGCATTCTTCA +
Preference number: 2 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYSRTHT*LHRHSS
Trigger: TGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGAACTAGTGCCATTCTaGCACACAGGATCAGAAACT +
Preference number: 2 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSELVPF*HTGSET
Trigger: AGTTTCTGATCCTGTGTGTCAGAATGGCACTAGTTC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGAACTAGTGCCATTCTaGCACACAGGATCAGAAACT +
Preference number: 2 (lower is better)
Translates to: FLPEISASNMLICNDPIQELVPF*HTGSET
Trigger: AGTTTCTGATCCTGTGTGTCAGAATGGCACTAGTTC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCATCATCCAGGTCTTTaGAGCATAAAGAGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGHHPGL*SIKSEN
Trigger: GTTCTCACTCTTTATGCTGCAAAGACCTGGATGATG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGAGCAAGCATGTTACTaGCTCTGGAAGAACAGAGAA +
Preference number: 2 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSEQACY*LWKNRE
Trigger: TTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCAGAAGGGACATAAACTaGACTAGTGCCATTCTGACA +
Preference number: 2 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSRRDIN*TSAILT
Trigger: TGTCAGAATGGCACTAGTTCAGTTTATGTCCCTTCT...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAAGAAGGGACATAAACTaGACTAGTGCCATTCTGACA +
Preference number: 2 (lower is better)
Translates to: FLPEISASNMLICNDPIQRRDIN*TSAILT
Trigger: TGTCAGAATGGCACTAGTTCAGTTTATGTCCCTTCT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCCATCATCCAGGTCTTTaGAGCATAAAGAGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSHHPGL*SIKSEN
Trigger: GTTCTCACTCTTTATGCTGCAAAGACCTGGATGATG...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCAGAAACGTTAAAAGATaGATCTACATCTACTGCCGA +
Preference number: 2 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGRNVKR*IYIYCR
Trigger: TCGGCAGTAGATGTAGATTCATCTTTTAACGTTTCT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCATAACATTCTCAACGTaGATAACCCACCTTGTCTAT +
Preference number: 2 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGITFST*ITHLVY
Trigger: ATAGACAAGGTGGGTTATTCACGTTGAGAATGTTAT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAATTTGGGTTGCTGAATaGAGATATAGGACTTTATGG +
Preference number: 2 (lower is better)
Translates to: FLPEISASNMLICNDPIQIWVAE*RYRTLW
Trigger: CCATAAAGTCCTATATCTTCATTCAGCAACCCAAAT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAAGAAACGTTAAAAGATaGATCTACATCTACTGCCGA +
Preference number: 2 (lower is better)
Translates to: FLPEISASNMLICNDPIQRNVKR*IYIYCR
Trigger: TCGGCAGTAGATGTAGATTCATCTTTTAACGTTTCT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATAACTTTAAACAACCCTaGGGGAGACACACATTAAAA +
Preference number: 2 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYNFKQP*GRHTLK
Trigger: TTTTAATGTGTGTCTCCCTCAGGGTTGTTTAAAGTT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR TCA 72 bp CATTTAAGAGCTTTGAGAGGCGTCTCAAGAAGGCAGTaGAGCACCTTGCTGATTAGAAAAATAAAACCCAGG +
Preference number: 3 (lower is better)
Translates to: HLRALRGVSRRQ*STLLIRKIKPR
Trigger: CCTGGGTTTTATTTTTCTAATCAGCAAGGTGCTTCACTGCCTTCTTGAGACGCCTCTCAAAGCTCTTAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CAA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTAGCCATTTAAGAGCTTaGAGAGGCGTCTCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLSHLRA*RGVSRR
Trigger: CCTTCTTGAGACGCCTCTCAAAGCTCTTAAATGGCT...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR CCA 72 bp AGAAGTAGAAAGCACGAGCAAGCATGTTACTGGCTCTaGAAGAACAGAGAACAATGTCACACTGTTTTCATA +
Preference number: 3 (lower is better)
Translates to: RSRKHEQACYWL*KNREQCHTVFI
Trigger: TATGAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTCGTGCTTTCTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CAA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGACCATCATAGGGAATaGGCATATGTTTATACAGAA +
Preference number: 3 (lower is better)
Translates to: EQACYWLWKNREQCHTVFDHHRE*AYVYTE
Trigger: TTCTGTATAAACATATGCCAATTCCCTATGATGGTC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCAGCCATTTAAGAGCTTaGAGAGGCGTCTCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGSHLRA*RGVSRR
Trigger: CCTTCTTGAGACGCCTCTCAAAGCTCTTAAATGGCT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATAGCCATTTAAGAGCTTaGAGAGGCGTCTCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYSHLRA*RGVSRR
Trigger: CCTTCTTGAGACGCCTCTCAAAGCTCTTAAATGGCT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR TCA 72 bp TGTCAAATAAGCTACTATATCAGAAGGGACATAAACTaGACTAGTGCCATTCTGACACACAGGATCAGAAAC +
Preference number: 3 (lower is better)
Translates to: CQISYYIRRDIN*TSAILTHRIRN
Trigger: GTTTCTGATCCTGTGTGTCAGAATGGCACTAGTTCAGTTTATGTCCCTTCTGATATAGTAGCTTATTTGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTGGAGATTACCTGAGTaGTTCTATAAGCAACACCAT +
Preference number: 3 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGWRLPE*FYKQHH
Trigger: ATGGTGTTGCTTATAGAACAACTCAGGTAATCTCCA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCGACCATCATAGGGAATaGGCATATGTTTATACAGAA +
Preference number: 3 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGDHHRE*AYVYTE
Trigger: TTCTGTATAAACATATGCCAATTCCCTATGATGGTC...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CAA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTGGAGATTACCTGAGTaGTTCTATAAGCAACACCAT +
Preference number: 3 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSWRLPE*FYKQHH
Trigger: ATGGTGTTGCTTATAGAACAACTCAGGTAATCTCCA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
3UTR-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGACCATCATAGGGAATaGGCATATGTTTATACAGAA +
Preference number: 3 (lower is better)
Translates to: FLPEISASNMLICNDPIQDHHRE*AYVYTE
Trigger: TTCTGTATAAACATATGCCAATTCCCTATGATGGTC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGGCGCCCGATCACGCTaGGGGGAGAGCCGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYGARSR*GESRQA
Trigger: TGCCTGCCGGCTCTCCCCGCAGCGTGATCGGGCGCC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGGCGCCCGATCACGCTaGGGGGAGAGCCGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLGARSR*GESRQA
Trigger: TGCCTGCCGGCTCTCCCCGCAGCGTGATCGGGCGCC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTACAGAGACCGGCAATaGCCTCGGGCGCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFYRDRQ*PRALLS
Trigger: TGAAAGGAGCGCCCGAGGCCATTGCCGGTCTCTGTA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGGAAATGCCTCCGTGTaGCCTCTTCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCGNASV*PLQSTT
Trigger: TGTGGTGCTTTGAAGAGGGCACACGGAGGCATTTCC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGCTCCGATAAGGAAATaGCTCCGTGTGCCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCAPIRK*LRVPSS
Trigger: TGAAGAGGGCACACGGAGGCATTTCCTTATCGGAGC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGTCTATCTATGGCACTaGGTAGAACCCACACCTGGC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFVYLWH*VEPTPG
Trigger: GCCAGGTGTGGGTTCTACTCAGTGCCATAGATAGAC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTCAATTGCTGATGGATaGCTGCACTGCGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFSIADG*LHCVRE
Trigger: CTCCCTCACGCAGTGCAGTCATCCATCAGCAATTGA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTAGCACCACAATCATTTaGGCCATCACCACACATCCC +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCSTTII*AITTHP
Trigger: GGGATGTGTGGTGATGGCGCAAATGATTGTGGTGCT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGGAAATGCCTCCGTGTaGCCTCTTCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFGNASV*PLQSTT
Trigger: TGTGGTGCTTTGAAGAGGGCACACGGAGGCATTTCC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGCTCCGATAAGGAAATaGCTCCGTGTGCCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFAPIRK*LRVPSS
Trigger: TGAAGAGGGCACACGGAGGCATTTCCTTATCGGAGC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCGAAGGTGGTCTTTGTaGCACAAGTTCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCRRWSL*HKFFPG
Trigger: GCCTGGAAAGAACTTGTGGCACAAAGACCACCTTCG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGGTAACTGTGGGCGTTaGCAGACTGCTGGATCCACC +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFGNCGR*QTAGST
Trigger: GGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTATCCCCCAGCACCCTaGCAACCACACTCATACGTT +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFYPPAP*QPHSYV
Trigger: AACGTATGAGTGTGGTTGCCAGGGTGCTGGGGGATA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTACTCTTACGGTACTATaGGTTGCCACCATGTCATGC +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCTLTVL*VATMSC
Trigger: GCATGACATGGTGGCAACTCATAGTACCGTAAGAGT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGATGACTGCACTGCGTaGGGGAGTCTGCATAATGCC +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFDDCTA*GSLHNA
Trigger: GGCATTATGCAGACTCCCTCACGCAGTGCAGTCATC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTCCCCACCGATCCACTaGCTCCTCCACTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFSPPIH*LLHCDR
Trigger: TCTATCACAGTGGAGGAGTCAGTGGATCGGTGGGGA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439040.5
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTGTCTTCTGATCAGGTaGCATACGGGCAAACACGGT +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFCLLIR*HTGKHG
Trigger: ACCGTGTTTGCCCGTATGGCACCTGATCAGAAGACA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCGAAGGTGGTCTTTGTaGCACAAGTTCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFRRWSL*HKFFPG
Trigger: GCCTGGAAAGAACTTGTGGCACAAAGACCACCTTCG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCATTGCAGCAGGAAGTaGAGGGGGCACAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFHCSRK*RGHSNC
Trigger: ACAATTACTGTGCCCCCTGCACTTCCTGCTGCAATG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTAGTAGAACCCACACCTaGCTTCACAGGCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCSRTHT*LHRHSS
Trigger: TGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGTCTATCTATGGCACTaGGTAGAACCCACACCTGGC +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFVYLWH*VEPTPG
Trigger: GCCAGGTGTGGGTTCTACTCAGTGCCATAGATAGAC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTACTCTTACGGTACTATaGGTTGCCACCATGTCATGC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFTLTVL*VATMSC
Trigger: GCATGACATGGTGGCAACTCATAGTACCGTAAGAGT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTCAATTGCTGATGGATaGCTGCACTGCGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNSIADG*LHCVRE
Trigger: CTCCCTCACGCAGTGCAGTCATCCATCAGCAATTGA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCTCTGGGTCAATTGCTaGTGGATGACTGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNLWVNC*WMTALR
Trigger: ACGCAGTGCAGTCATCCATCAGCAATTGACCCAGAG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGTGGCTGTGTGGTGCTaGACCGATACTCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFVAVWC*TDTLLV
Trigger: AACAAGGAGAGTATCGGTTCAGCACCACACAGCCAC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACAATACCAGCAGTCATTaGAGCAGGAAGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNNTSSH*SRKCRG
Trigger: CCCCCTGCACTTCCTGCTGCAATGACTGCTGGTATT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCATTTCTTGGTTTCCTaGAGGGGTAGATTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCHFLVS*RGRFRK
Trigger: CTTCCTGAATCTACCCCTGCAGGAAACCAAGAAATG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTATAAGACCCGAAGGTaGTCTTTGTGCCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCYKTRR*SLCHKF
Trigger: GAACTTGTGGCACAAAGACCACCTTCGGGTCTTATA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTTTTGGTGGCCATTCTaGATCAACCAAGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFFWWPF*INQELL
Trigger: CAGGAGCTCTTGGTTGATCCAGAATGGCCACCAAAA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTGTCTGAGGTTTTGGTaGCCATTCTGGATCAACCAA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCCLRFW*PFWINQ
Trigger: TTGGTTGATCCAGAATGGCCACCAAAACCTCAGACA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGGTTGTCTGAGGTTTTaGTGGCCATTCTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFGCLRF*WPFWIN
Trigger: GTTGATCCAGAATGGCCACCAAAACCTCAGACAACC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGAGCAAGCATGTTACTaGCTCTGGAAGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCEQACY*LWKNRE
Trigger: TTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCTCCTAAAGAAACTATaGCAAGCTTCCAGCGACTCA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCLLKKL*QASSDS
Trigger: TGAGTCGCTGGAAGCTTGCCATAGTTTCTTTAGGAG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCAGGAAGCAGTTGTTTaGGAGGACGAACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNQEAVV*EDEPLW
Trigger: CCACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCCAGGAAGCAGTTGTTTaGGAGGACGAACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFQEAVV*EDEPLW
Trigger: CCACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTG...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTATCCCCCAGCACCCTaGCAACCACACTCATACGTT +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFYPPAP*QPHSYV
Trigger: AACGTATGAGTGTGGTTGCCAGGGTGCTGGGGGATA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCATCAACTGTGTCTTCTaGTCAGGTGCCATACGGGCA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFINCVF*SGAIRA
Trigger: TGCCCGTATGGCACCTGATCAGAAGACACAGTTGAT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGCTTCTGTGGTTGTCTaGGGTTTTGGTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNASVVV*GFGGHS
Trigger: AGAATGGCCACCAAAACCTCAGACAACCACAGAAGC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTAGAAGGGACATAAACTaGACTAGTGCCATTCTGACA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCRRDIN*TSAILT
Trigger: TGTCAGAATGGCACTAGTTCAGTTTATGTCCCTTCT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTATGCCATGTCAGTTTTaGCTCCAATTTTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCMPCQF*LQFSVC
Trigger: GCACACAGAAAATTGGAGTCAAAACTGACATGGCAT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTATAGTTACACGCCACTaGTATGGTACACACACTATC +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCIVTRH*YGTHTI
Trigger: GATAGTGTGTGTACCATATCAGTGGCGTGTAACTAT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCTTGTTTGTCTCGGTTaGACACAACTTTCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCLVCLG*TQLSKG
Trigger: TCCTTTGGAAAGTTGTGTTCAACCGAGACAAACAAG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCAGCACCACAATCATTTaGGCCATCACCACACATCCC +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFSTTII*AITTHP
Trigger: GGGATGTGTGGTGATGGCGCAAATGATTGTGGTGCT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCGAAGGTGGTCTTTGTaGCACAAGTTCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNRRWSL*HKFFPG
Trigger: GCCTGGAAAGAACTTGTGGCACAAAGACCACCTTCG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCATTGCAGCAGGAAGTaGAGGGGGCACAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNHCSRK*RGHSNC
Trigger: ACAATTACTGTGCCCCCTGCACTTCCTGCTGCAATG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTATAAGACCCGAAGGTaGTCTTTGTGCCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFYKTRR*SLCHKF
Trigger: GAACTTGTGGCACAAAGACCACCTTCGGGTCTTATA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGAGCAAGCATGTTACTaGCTCTGGAAGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFEQACY*LWKNRE
Trigger: TTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCATTTTCAGATCAAGTaGATCACCAGAGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFHFQIK*ITREHS
Trigger: GGAGTGCTCTCTGGTGATCCACTTGATCTGAAAATG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTTACAGAGACCGGCAATaGCCTCGGGCGCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLYRDRQ*PRALLS
Trigger: TGAAAGGAGCGCCCGAGGCCATTGCCGGTCTCTGTA...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTACACGCCACTGATATaGTACACACACTATCTGAAG +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCYTPLI*YTHYLK
Trigger: CTTCAGATAGTGTGTGTACCATATCAGTGGCGTGTA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGTCTCAAGAAGGCAGTaGAGCACCTTGCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFVSRRQ*STLLIR
Trigger: TCTAATCAGCAAGGTGCTTCACTGCCTTCTTGAGAC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATGCAGCTACTTCCTGTaGGCAGCCCAGGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQCSYFL*AAQGWP
Trigger: TGGCCATCCCTGGGCTGCTCACAGGAAGTAGCTGCA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTACACTATGGTGGGTaGAATAACGAATCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCLHYGG*NNESVV
Trigger: CACAACAGATTCGTTATTTCACCCACCATAGTGTAA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACACTCTTACGGTACTATaGGTTGCCACCATGTCATGC +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNTLTVL*VATMSC
Trigger: GCATGACATGGTGGCAACTCATAGTACCGTAAGAGT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCACTCTTACGGTACTATaGGTTGCCACCATGTCATGC +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFTLTVL*VATMSC
Trigger: GCATGACATGGTGGCAACTCATAGTACCGTAAGAGT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTCCTTTCACATCCACTaGAGGATTTGGCAAATTAGT +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCSFHIH*RIWQIS
Trigger: ACTAATTTGCCAAATCCTTCAGTGGATGTGAAAGGA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTATGCCATGTCAGTTTTaGCTCCAATTTTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFMPCQF*LQFSVC
Trigger: GCACACAGAAAATTGGAGTCAAAACTGACATGGCAT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTATAGTTACACGCCACTaGTATGGTACACACACTATC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFIVTRH*YGTHTI
Trigger: GATAGTGTGTGTACCATATCAGTGGCGTGTAACTAT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTCCCCACCGATCCACTaGCTCCTCCACTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYSPPIH*LLHCDR
Trigger: TCTATCACAGTGGAGGAGTCAGTGGATCGGTGGGGA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439040.5
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCATCATCCAGGTCTTTaGAGCATAAAGAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFHHPGL*SIKSEN
Trigger: GTTCTCACTCTTTATGCTGCAAAGACCTGGATGATG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCATTATTTGCAGCATTaGTTTACAGCAGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCHYLQH*FTAVGA
Trigger: AGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTGTTTCTTCTTCAGTTaGTTCTTCCAGAATCCATCC +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCCFFFS*FFQNPS
Trigger: GGATGGATTCTGGAAGAAGCAACTGAAGAAGAAACA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCTCCAATTTTCTGTGTaGAAGAGCAATCACACGGAA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFLQFSV*KSNHTE
Trigger: TTCCGTGTGATTGCTCTTGCACACAGAAAATTGGAG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCTGCGTGAGGGAGTCTaGATAATGCCAATTTATTTT +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCLREGV*IMPIYF
Trigger: AAAATAAATTGGCATTATGCAGACTCCCTCACGCAG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCGATCCACTGACTCCTaGGGTGGCTGTGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYRSTDS*GGCVVL
Trigger: CAGCACCACACAGCCACCGCAGGAGTCAGTGGATCG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTTCCCTGATAAGGTTTaGCACACAGGAAATACTAGG +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFFPDKV*HTGNTR
Trigger: CCTAGTATTTCCTGTGTGCCAAACCTTATCAGGGAA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTTTTGGTGGCCATTCTaGATCAACCAAGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNFWWPF*INQELL
Trigger: CAGGAGCTCTTGGTTGATCCAGAATGGCCACCAAAA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGGTTGTCTGAGGTTTTaGTGGCCATTCTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFGCLRF*WPFWIN
Trigger: GTTGATCCAGAATGGCCACCAAAACCTCAGACAACC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGCATGTTACTGGCTCTaGAAGAACAGAGAACAATGT +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFACYWL*KNREQC
Trigger: ACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCAGTAGAACCCACACCTaGCTTCACAGGCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFSRTHT*LHRHSS
Trigger: TGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACAGTAGAACCCACACCTaGCTTCACAGGCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNSRTHT*LHRHSS
Trigger: TGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCAAAGCAGAAGAAAATaGGAACTGGCGAACAATTCC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFQSRRK*ELANNS
Trigger: GGAATTGTTCGCCAGTTCCCATTTTCTTCTGCTTTG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTACAGAGACCGGCAATaGCCTCGGGCGCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGYRDRQ*PRALLS
Trigger: TGAAAGGAGCGCCCGAGGCCATTGCCGGTCTCTGTA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGAACTAGTGCCATTCTaGCACACAGGATCAGAAACT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNELVPF*HTGSET
Trigger: AGTTTCTGATCCTGTGTGTCAGAATGGCACTAGTTC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCAAAATAGACATGTTCTaGCCTCTGGCGCCACCTAAT +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFKIDMF*PLAPPN
Trigger: ATTAGGTGGCGCCAGAGGTCAGAACATGTCTATTTT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTATAACATTCTCAACGTaGATAACCCACCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCITFST*ITHLVY
Trigger: ATAGACAAGGTGGGTTATTCACGTTGAGAATGTTAT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGTCTATCTATGGCACTaGGTAGAACCCACACCTGGC +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLVYLWH*VEPTPG
Trigger: GCCAGGTGTGGGTTCTACTCAGTGCCATAGATAGAC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTATGGCCAGTCACTTGTaGCCTACTTTCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLMASHL*PTFRAG
Trigger: GCCAGCTCTGAAAGTAGGTCACAAGTGACTGGCCAT...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATACTTCCACCTCCTCATaGGCCAGGACCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYTSTSS*ARTFLS
Trigger: GCTGAGGAAGGTCCTGGCTCATGAGGAGGTGGAAGT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTAGTGATTCACCAGAATaGGTTCATCTCGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFSDSPE*VHLASK
Trigger: TTTTGATGCGAGATGAACTCATTCTGGTGAATCACT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCATAGATTTTGGACTTaGAACTGGGTAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCHRFWT*NWVSFQ
Trigger: TTGGAAACTTACCCAGTTTCAAGTCCAAAATCTATG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTTACACTATGGTGGGTaGAATAACGAATCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFLHYGG*NNESVV
Trigger: CACAACAGATTCGTTATTTCACCCACCATAGTGTAA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTTTTTCAGTCTTCTCTaGGCATACACAATACCAGCA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFFFSLL*AYTIPA
Trigger: TGCTGGTATTGTGTATGCTCAGAGAAGACTGAAAAA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGGCATAATTCGATTATaGAGTGCTGTTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCGIIRL*SAVSSS
Trigger: TGAAGAAGAAACAGCACTTCATAATCGAATTATGCC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTCTTCCAAAACGTTTTaGAAATCGACAGGAACTGTT +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCSSKTF*KSTGTV
Trigger: AACAGTTCCTGTCGATTTTCAAAACGTTTTGGAAGA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTTCAATTGCTGATGGATaGCTGCACTGCGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLSIADG*LHCVRE
Trigger: CTCCCTCACGCAGTGCAGTCATCCATCAGCAATTGA...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTATTTACCATGCCTTTaGAACTGTGCAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFYLPCL*NCAGLS
Trigger: TGAAAGTCCTGCACAGTTTCAAAGGCATGGTAAATA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGCAAACACGGTGCCATaGAACATCAACTTAGGAACA +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNANTVP*NINLGT
Trigger: TGTTCCTAAGTTGATGTTGCATGGCACCGTGTTTGC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGGAAATGCCTCCGTGTaGCCTCTTCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYGNASV*PLQSTT
Trigger: TGTGGTGCTTTGAAGAGGGCACACGGAGGCATTTCC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGCTCCGATAAGGAAATaGCTCCGTGTGCCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYAPIRK*LRVPSS
Trigger: TGAAGAGGGCACACGGAGGCATTTCCTTATCGGAGC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGCTCCGATAAGGAAATaGCTCCGTGTGCCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLAPIRK*LRVPSS
Trigger: TGAAGAGGGCACACGGAGGCATTTCCTTATCGGAGC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTCAACCAAGAGCTCCTaGGCCAGATACATGTACTTT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNSTKSS*ARYMYF
Trigger: AAAGTACATGTATCTGGCGCAGGAGCTCTTGGTTGA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGGTAACTGTGGGCGTTaGCAGACTGCTGGATCCACC +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQGNCGR*QTAGST
Trigger: GGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGGTAACTGTGGGCGTTaGCAGACTGCTGGATCCACC +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSGNCGR*QTAGST
Trigger: GGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCATTATTTGCAGCATTaGTTTACAGCAGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFHYLQH*FTAVGA
Trigger: AGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTGTTTAGATGCAAGTaGAATTGGGAAAGCTTTCGA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCLFRCK*NWESFR
Trigger: TCGAAAGCTTTCCCAATTGCACTTGCATCTAAACAA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCTCCTGTTAACATaGTTTCGTTTACAATGCAGG +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCFLLLT*FRLQCR
Trigger: CCTGCATTGTAAACGAAAGCATGTTAACAGGAGAAA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACAATACCAGCAGTCATTaGAGCAGGAAGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYNTSSH*SRKCRG
Trigger: CCCCCTGCACTTCCTGCTGCAATGACTGCTGGTATT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTACCAACATCTCATTaGACACATTTTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCLPTSH*THFLLV
Trigger: CACCAGAAGAAAATGTGTGCAATGAGATGTTGGTAA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTGTTTCTTCTTCAGTTaGTTCTTCCAGAATCCATCC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFCFFFS*FFQNPS
Trigger: GGATGGATTCTGGAAGAAGCAACTGAAGAAGAAACA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCCATTTCTTGGTTTCCTaGAGGGGTAGATTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFHFLVS*RGRFRK
Trigger: CTTCCTGAATCTACCCCTGCAGGAAACCAAGAAATG...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTACTGCAGGGGTTTCTTaGTTTAATTTGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCTAGVS*FNLFCI
Trigger: AATGCAGAACAAATTAAAGCAAGAAACCCCTGCAGT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTCAATGAAGAGAAACTaGAAGTCTCCTAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCSMKRN*KSPRLL
Trigger: AAGTAACCTAGGAGACTTCCAGTTTCTCTTCATTGA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTATAAGACCCGAAGGTaGTCTTTGTGCCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNYKTRR*SLCHKF
Trigger: GAACTTGTGGCACAAAGACCACCTTCGGGTCTTATA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTAGATGCAAGTGCAATTaGGAAAGCTTTCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCRCKCN*ESFRIS
Trigger: TGAAATTCGAAAGCTTTCCCAATTGCACTTGCATCT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCCTCCTAAAGAAACTATaGCAAGCTTCCAGCGACTCA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFLLKKL*QASSDS
Trigger: TGAGTCGCTGGAAGCTTGCCATAGTTTCTTTAGGAG...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCTCCTAAAGAAACTATaGCAAGCTTCCAGCGACTCA +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNLLKKL*QASSDS
Trigger: TGAGTCGCTGGAAGCTTGCCATAGTTTCTTTAGGAG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCATTTTCAGATCAAGTaGATCACCAGAGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNHFQIK*ITREHS
Trigger: GGAGTGCTCTCTGGTGATCCACTTGATCTGAAAATG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCCATTTTCAGATCAAGTaGATCACCAGAGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFHFQIK*ITREHS
Trigger: GGAGTGCTCTCTGGTGATCCACTTGATCTGAAAATG...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCAGGAAGCAGTTGTTTaGGAGGACGAACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYQEAVV*EDEPLW
Trigger: CCACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATACAGAGACCGGCAATaGCCTCGGGCGCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQYRDRQ*PRALLS
Trigger: TGAAAGGAGCGCCCGAGGCCATTGCCGGTCTCTGTA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACATCAACTGTGTCTTCTaGTCAGGTGCCATACGGGCA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYINCVF*SGAIRA
Trigger: TGCCCGTATGGCACCTGATCAGAAGACACAGTTGAT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGCTTCTGTGGTTGTCTaGGGTTTTGGTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLASVVV*GFGGHS
Trigger: AGAATGGCCACCAAAACCTCAGACAACCACAGAAGC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGTTATGGTGATGATTTaGCATGATCCATTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFVMVMI*HDPFSL
Trigger: TAAGGAGAATGGATCATGTCAAATCATCACCATAAC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCAGAAGGGACATAAACTaGACTAGTGCCATTCTGACA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFRRDIN*TSAILT
Trigger: TGTCAGAATGGCACTAGTTCAGTTTATGTCCCTTCT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTAACTTTAAACAACCCTaGGGGAGACACACATTAAAA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFNFKQP*GRHTLK
Trigger: TTTTAATGTGTGTCTCCCTCAGGGTTGTTTAAAGTT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACACCACTATAACCAAATaGAGCCAGAGTGATTCACCA +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNTTITK*SQSDSP
Trigger: TGGTGAATCACTCTGGCTTCATTTGGTTATAGTGGT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGCATTTTCCACTCGTTaGATCCCCCAAAGATCTAAA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFAFSTR*IPQRSK
Trigger: TTTAGATCTTTGGGGGATTCAACGAGTGGAAAATGC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCACATTTTCTTCTGGTaGAAGAAATCGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFHIFFW*KKSCIF
Trigger: GAAAATGCACGATTTCTTTCACCAGAAGAAAATGTG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATGATGACTGCACTGCGTaGGGGAGTCTGCATAATGCC +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYDDCTA*GSLHNA
Trigger: GGCATTATGCAGACTCCCTCACGCAGTGCAGTCATC...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGATGACTGCACTGCGTaGGGGAGTCTGCATAATGCC +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSDDCTA*GSLHNA
Trigger: GGCATTATGCAGACTCCCTCACGCAGTGCAGTCATC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCTCTGGGTCAATTGCTaGTGGATGACTGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGLWVNC*WMTALR
Trigger: ACGCAGTGCAGTCATCCATCAGCAATTGACCCAGAG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACAGCACCACAATCATTTaGGCCATCACCACACATCCC +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYSTTII*AITTHP
Trigger: GGGATGTGTGGTGATGGCGCAAATGATTGTGGTGCT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCCATCATCCAGGTCTTTaGAGCATAAAGAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFHHPGL*SIKSEN
Trigger: GTTCTCACTCTTTATGCTGCAAAGACCTGGATGATG...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCTTCGATTATATTTTTaGAGGAATCATCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCLRLYF*RNHQWQ
Trigger: TTGCCACTGATGATTCCTGCAAAAATATAATCGAAG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTTGTTTAGATGCAAGTaGAATTGGGAAAGCTTTCGA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFLFRCK*NWESFR
Trigger: TCGAAAGCTTTCCCAATTGCACTTGCATCTAAACAA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGTTGCCACCATGTCATaGAACATAACATATTGCTTT +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFVATMS*NITYCF
Trigger: AAAGCAATATGTTATGTTGCATGACATGGTGGCAAC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTACGGTACTATGAGTTaGCACCATGTCATGCAACAT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNYGTMS*HHVMQH
Trigger: ATGTTGCATGACATGGTGGCAACTCATAGTACCGTA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCATTGCAGCAGGAAGTaGAGGGGGCACAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYHCSRK*RGHSNC
Trigger: ACAATTACTGTGCCCCCTGCACTTCCTGCTGCAATG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCAATACCAGCAGTCATTaGAGCAGGAAGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGNTSSH*SRKCRG
Trigger: CCCCCTGCACTTCCTGCTGCAATGACTGCTGGTATT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACACCACACTCATACGTTaGAAAGCAGAAGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNTTLIR*KAEENG
Trigger: CCCATTTTCTTCTGCTTTGCAACGTATGAGTGTGGT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCACCACACTCATACGTTaGAAAGCAGAAGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFTTLIR*KAEENG
Trigger: CCCATTTTCTTCTGCTTTGCAACGTATGAGTGTGGT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCTCCAATTTTCTGTGTaGAAGAGCAATCACACGGAA +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNLQFSV*KSNHTE
Trigger: TTCCGTGTGATTGCTCTTGCACACAGAAAATTGGAG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTGTCCATACCTACAGTaGATTAAAGGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNCPYLQ*IKGPVL
Trigger: AAGCACTGGACCTTTAATCCACTGTAGGTATGGACA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTGTCCATACCTACAGTaGATTAAAGGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFCPYLQ*IKGPVL
Trigger: AAGCACTGGACCTTTAATCCACTGTAGGTATGGACA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCAAAGCAGAAGAAAATaGGAACTGGCGAACAATTCC +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNQSRRK*ELANNS
Trigger: GGAATTGTTCGCCAGTTCCCATTTTCTTCTGCTTTG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCCAAAGCAGAAGAAAATaGGAACTGGCGAACAATTCC +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFQSRRK*ELANNS
Trigger: GGAATTGTTCGCCAGTTCCCATTTTCTTCTGCTTTG...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTATCCCCCAGCACCCTaGCAACCACACTCATACGTT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGYPPAP*QPHSYV
Trigger: AACGTATGAGTGTGGTTGCCAGGGTGCTGGGGGATA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTCCTCTAAGCTATCATaGACCAATTTAACCGGAATA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFSSKLS*TNLTGI
Trigger: TATTCCGGTTAAATTGGTCCATGATAGCTTAGAGGA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCATCAACTGTGTCTTCTaGTCAGGTGCCATACGGGCA +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGINCVF*SGAIRA
Trigger: TGCCCGTATGGCACCTGATCAGAAGACACAGTTGAT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCGCTTCTGTGGTTGTCTaGGGTTTTGGTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGASVVV*GFGGHS
Trigger: AGAATGGCCACCAAAACCTCAGACAACCACAGAAGC...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGTCTCAAGAAGGCAGTaGAGCACCTTGCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYVSRRQ*STLLIR
Trigger: TCTAATCAGCAAGGTGCTTCACTGCCTTCTTGAGAC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGTCTATCTATGGCACTaGGTAGAACCCACACCTGGC +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSVYLWH*VEPTPG
Trigger: GCCAGGTGTGGGTTCTACTCAGTGCCATAGATAGAC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATGTCTATCTATGGCACTaGGTAGAACCCACACCTGGC +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYVYLWH*VEPTPG
Trigger: GCCAGGTGTGGGTTCTACTCAGTGCCATAGATAGAC...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCTACAGCTGGTTGACTaGGTTTCCTTTGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYLQLVD*VSFGLL
Trigger: CAGGAGCCCAAAGGAAACTCAGTCAACCAGCTGTAG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCCATCTACAGCTGGTTaGCTGAGTTTCCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGPSTAG*LSFLWA
Trigger: AGCCCAAAGGAAACTCAGTCAACCAGCTGTAGATGG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCTTCTTGACCCTGATTaGTGGTCTTCCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLLLDPD*WSSFLP
Trigger: GGGAAGAAAGGAAGACCATCAATCAGGGTCAAGAAG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTCCTTTCACATCCACTaGAGGATTTGGCAAATTAGT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNSFHIH*RIWQIS
Trigger: ACTAATTTGCCAAATCCTTCAGTGGATGTGAAAGGA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTTTTTCAGTCTTCTCTaGGCATACACAATACCAGCA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFFFSLL*AYTIPA
Trigger: TGCTGGTATTGTGTATGCTCAGAGAAGACTGAAAAA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTCAATTGCTGATGGATaGCTGCACTGCGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSSIADG*LHCVRE
Trigger: CTCCCTCACGCAGTGCAGTCATCCATCAGCAATTGA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAACTCTGGGTCAATTGCTaGTGGATGACTGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQLWVNC*WMTALR
Trigger: ACGCAGTGCAGTCATCCATCAGCAATTGACCCAGAG...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCTCTGGGTCAATTGCTaGTGGATGACTGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYLWVNC*WMTALR
Trigger: ACGCAGTGCAGTCATCCATCAGCAATTGACCCAGAG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGAATGTATGCCTTTTTaGCAAGAGGGTACCATTCTT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNECMPF*QEGTIL
Trigger: AAGAATGGTACCCTCTTGTCAAAAAGGCATACATTC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGAATGTATGCCTTTTTaGCAAGAGGGTACCATTCTT +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFECMPF*QEGTIL
Trigger: AAGAATGGTACCCTCTTGTCAAAAAGGCATACATTC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCAGCACCACAATCATTTaGGCCATCACCACACATCCC +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGSTTII*AITTHP
Trigger: GGGATGTGTGGTGATGGCGCAAATGATTGTGGTGCT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGGAAATGCCTCCGTGTaGCCTCTTCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSGNASV*PLQSTT
Trigger: TGTGGTGCTTTGAAGAGGGCACACGGAGGCATTTCC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGCTCCGATAAGGAAATaGCTCCGTGTGCCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQAPIRK*LRVPSS
Trigger: TGAAGAGGGCACACGGAGGCATTTCCTTATCGGAGC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCGAAGGTGGTCTTTGTaGCACAAGTTCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGRRWSL*HKFFPG
Trigger: GCCTGGAAAGAACTTGTGGCACAAAGACCACCTTCG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCTTCGATTATATTTTTaGAGGAATCATCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFLRLYF*RNHQWQ
Trigger: TTGCCACTGATGATTCCTGCAAAAATATAATCGAAG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCCATTATTTGCAGCATTaGTTTACAGCAGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFHYLQH*FTAVGA
Trigger: AGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCCCCTTTGTCAGTCCTaGACTATGCTTTTCATAAAT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNPLCQS*TMLFIN
Trigger: ATTTATGAAAAGCATAGTGCAGGACTGACAAAGGGG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTCATGTTGTTCTCAATTaGATCTCTGCTAATATTCTG +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFHVVLN*ISANIL
Trigger: CAGAATATTAGCAGAGATGCAATTGAGAACAACATG...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCTGCGTGAGGGAGTCTaGATAATGCCAATTTATTTT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNLREGV*IMPIYF
Trigger: AAAATAAATTGGCATTATGCAGACTCCCTCACGCAG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGTAACACTGAAGTACTaGATAATGCTGTACAATGCC +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNVTLKY*IMLYNA
Trigger: GGCATTGTACAGCATTATCCAGTACTTCAGTGTTAC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTTTTGGTGGCCATTCTaGATCAACCAAGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYFWWPF*INQELL
Trigger: CAGGAGCTCTTGGTTGATCCAGAATGGCCACCAAAA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGGTTGTCTGAGGTTTTaGTGGCCATTCTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLGCLRF*WPFWIN
Trigger: GTTGATCCAGAATGGCCACCAAAACCTCAGACAACC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTGGAAGGATCATAGGTaGCACTCATGTCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGWKDHR*HSCLTA
Trigger: GGCAGTGAGACATGAGTGCCACCTATGATCCTTCCA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGACCATGACATCTCCTaGCACAAGGTCGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYDHDIS*HKVGRK
Trigger: TTTTCTACCGACCTTGTGCCAGGAGATGTCATGGTC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGACCATGACATCTCCTaGCACAAGGTCGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLDHDIS*HKVGRK
Trigger: TTTTCTACCGACCTTGTGCCAGGAGATGTCATGGTC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGTTTGGGATACAATATaGAACGAACAAGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNVWDTI*NEQAVL
Trigger: AAGGACAGCTTGTTCGTTCCATATTGTATCCCAAAC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTATACAAGCAACAAACTaGGATTTTACCAACATCTCA +
Preference number: 4 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFIQATN*DFTNIS
Trigger: TGAGATGTTGGTAAAATCCCAGTTTGTTGCTTGTAT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCAGGAAGCAGTTGTTTaGGAGGACGAACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYQEAVV*EDEPLW
Trigger: CCACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGAAGAAAATGGGAACTaGCGAACAATTCCTATCTCA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFEENGN*RTIPIS
Trigger: TGAGATAGGAATTGTTCGCCAGTTCCCATTTTCTTC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTATCCCCCAGCACCCTaGCAACCACACTCATACGTT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYYPPAP*QPHSYV
Trigger: AACGTATGAGTGTGGTTGCCAGGGTGCTGGGGGATA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAATCAACTGTGTCTTCTaGTCAGGTGCCATACGGGCA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQINCVF*SGAIRA
Trigger: TGCCCGTATGGCACCTGATCAGAAGACACAGTTGAT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGCTTCTGTGGTTGTCTaGGGTTTTGGTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQASVVV*GFGGHS
Trigger: AGAATGGCCACCAAAACCTCAGACAACCACAGAAGC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGTTATGGTGATGATTTaGCATGATCCATTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFVMVMI*HDPFSL
Trigger: TAAGGAGAATGGATCATGTCAAATCATCACCATAAC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGAACTAGTGCCATTCTaGCACACAGGATCAGAAACT +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLELVPF*HTGSET
Trigger: AGTTTCTGATCCTGTGTGTCAGAATGGCACTAGTTC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGAACTAGTGCCATTCTaGCACACAGGATCAGAAACT +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYELVPF*HTGSET
Trigger: AGTTTCTGATCCTGTGTGTCAGAATGGCACTAGTTC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACATAACATTCTCAACGTaGATAACCCACCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNITFST*ITHLVY
Trigger: ATAGACAAGGTGGGTTATTCACGTTGAGAATGTTAT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCAACTTTAAACAACCCTaGGGGAGACACACATTAAAA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFNFKQP*GRHTLK
Trigger: TTTTAATGTGTGTCTCCCTCAGGGTTGTTTAAAGTT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACAACTTTAAACAACCCTaGGGGAGACACACATTAAAA +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNNFKQP*GRHTLK
Trigger: TTTTAATGTGTGTCTCCCTCAGGGTTGTTTAAAGTT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAACAGAGCTGGCAGTTCTaGCTTCTAGAACAAACTCGG +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQQSWQF*LLEQTR
Trigger: CCGAGTTTGTTCTAGAAGTCAGAACTGCCAGCTCTG...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCTTCTTGACCCTGATTaGTGGTCTTCCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGLLDPD*WSSFLP
Trigger: GGGAAGAAAGGAAGACCATCAATCAGGGTCAAGAAG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCATAGATTTTGGACTTaGAACTGGGTAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNHRFWT*NWVSFQ
Trigger: TTGGAAACTTACCCAGTTTCAAGTCCAAAATCTATG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACAACTGCATGGCCATTTaGAAGCTTATTAGACATAGA +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNNCMAI*KLIRHR
Trigger: TCTATGTCTAATAAGCTTTCAAATGGCCATGCAGTT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTCTTCCAAAACGTTTTaGAAATCGACAGGAACTGTT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNSSKTF*KSTGTV
Trigger: AACAGTTCCTGTCGATTTTCAAAACGTTTTGGAAGA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTGTCTTCTGATCAGGTaGCATACGGGCAAACACGGT +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSCLLIR*HTGKHG
Trigger: ACCGTGTTTGCCCGTATGGCACCTGATCAGAAGACA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTGTCTTCTGATCAGGTaGCATACGGGCAAACACGGT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYCLLIR*HTGKHG
Trigger: ACCGTGTTTGCCCGTATGGCACCTGATCAGAAGACA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACACAGTTTTGTTTAGATaGAAGTGCAATTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNTVLFR*KCNWES
Trigger: GCTTTCCCAATTGCACTTGCATCTAAACAAAACTGT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGCACTCATGTCTCACTaGCCCACTCAGGTATGTAGA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSALMSH*PTQVCR
Trigger: TCTACATACCTGAGTGGGGCAGTGAGACATGAGTGC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGTATGCTGTTTCAGATaGCAAGAAGAGAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLVCCFR*QEEKLL
Trigger: GAGGAGCTTCTCTTCTTGGCATCTGAAACAGCATAC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGTTGCCACCATGTCATaGAACATAACATATTGCTTT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNVATMS*NITYCF
Trigger: AAAGCAATATGTTATGTTGCATGACATGGTGGCAAC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGTTGCCACCATGTCATaGAACATAACATATTGCTTT +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFVATMS*NITYCF
Trigger: AAAGCAATATGTTATGTTGCATGACATGGTGGCAAC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCATTTCTTGGTTTCCTaGAGGGGTAGATTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYHFLVS*RGRFRK
Trigger: CTTCCTGAATCTACCCCTGCAGGAAACCAAGAAATG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCACTGCAGGGGTTTCTTaGTTTAATTTGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFTAGVS*FNLFCI
Trigger: AATGCAGAACAAATTAAAGCAAGAAACCCCTGCAGT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACACTGCAGGGGTTTCTTaGTTTAATTTGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNTAGVS*FNLFCI
Trigger: AATGCAGAACAAATTAAAGCAAGAAACCCCTGCAGT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTCAATGAAGAGAAACTaGAAGTCTCCTAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFSMKRN*KSPRLL
Trigger: AAGTAACCTAGGAGACTTCCAGTTTCTCTTCATTGA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCGGTTGTCTGAGGTTTTaGTGGCCATTCTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGGCLRF*WPFWIN
Trigger: GTTGATCCAGAATGGCCACCAAAACCTCAGACAACC...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGAGCAAGCATGTTACTaGCTCTGGAAGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYEQACY*LWKNRE
Trigger: TTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGAGCAAGCATGTTACTaGCTCTGGAAGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLEQACY*LWKNRE
Trigger: TTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCAGATGCAAGTGCAATTaGGAAAGCTTTCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFRCKCN*ESFRIS
Trigger: TGAAATTCGAAAGCTTTCCCAATTGCACTTGCATCT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATATTAGCCATGTGTGGTaGCGTGCATCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYISHVW*RASVVP
Trigger: TGGGACTACAGATGCACGCCACCACACATGGCTAAT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACAAGCCCATCTACAGCTaGTTGACTGAGTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYKPIYS*LTEFPL
Trigger: CAAAGGAAACTCAGTCAACCAGCTGTAGATGGGCTT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCTCCTAAAGAAACTATaGCAAGCTTCCAGCGACTCA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLLLKKL*QASSDS
Trigger: TGAGTCGCTGGAAGCTTGCCATAGTTTCTTTAGGAG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCGACCATGACATCTCCTaGCACAAGGTCGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGDHDIS*HKVGRK
Trigger: TTTTCTACCGACCTTGTGCCAGGAGATGTCATGGTC...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCATTTTCAGATCAAGTaGATCACCAGAGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLHFQIK*ITREHS
Trigger: GGAGTGCTCTCTGGTGATCCACTTGATCTGAAAATG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTATCTCATAAGTAGCTaGAAGTTCAAACAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNYLISS*KFKQLH
Trigger: ATGGAGCTGTTTGAACTTCCAGCTACTTATGAGATA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTCCTCTAAGCTATCATaGACCAATTTAACCGGAATA +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFSSKLS*TNLTGI
Trigger: TATTCCGGTTAAATTGGTCCATGATAGCTTAGAGGA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTGTAGCAAGGTTGCCTaGAGGGTTTTCCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYCSKVA*RVFLLK
Trigger: TTTCAAAAGGAAAACCCTTCAGGCAACCTTGCTACA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCAAAATAGACATGTTCTaGCCTCTGGCGCCACCTAAT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGKIDMF*PLAPPN
Trigger: ATTAGGTGGCGCCAGAGGTCAGAACATGTCTATTTT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCAAATGAAGCCAGAGTaGTTCACCAGAATGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLQMKPE*FTRMSS
Trigger: TGAACTCATTCTGGTGAATCACTCTGGCTTCATTTG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAACTTCTTGACCCTGATTaGTGGTCTTCCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQLLDPD*WSSFLP
Trigger: GGGAAGAAAGGAAGACCATCAATCAGGGTCAAGAAG...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCCTTCTTGACCCTGATTaGTGGTCTTCCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSLLDPD*WSSFLP
Trigger: GGGAAGAAAGGAAGACCATCAATCAGGGTCAAGAAG...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGCATTTTCCACTCGTTaGATCCCCCAAAGATCTAAA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYAFSTR*IPQRSK
Trigger: TTTAGATCTTTGGGGGATTCAACGAGTGGAAAATGC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTATAGTTACACGCCACTaGTATGGTACACACACTATC +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLIVTRH*YGTHTI
Trigger: GATAGTGTGTGTACCATATCAGTGGCGTGTAACTAT...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCTTGTTTGTCTCGGTTaGACACAACTTTCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYLVCLG*TQLSKG
Trigger: TCCTTTGGAAAGTTGTGTTCAACCGAGACAAACAAG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCGCAAACACGGTGCCATaGAACATCAACTTAGGAACA +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGANTVP*NINLGT
Trigger: TGTTCCTAAGTTGATGTTGCATGGCACCGTGTTTGC...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTATTCAAGCATTATTTaGAGCATTGCTTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: EQACYWLWKNREQCHTVFYSSII*SIALQQ
Trigger: CTGCTGTAAAGCAATGCTGCAAATAATGCTTGAATA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTATTCAAGCATTATTTaGAGCATTGCTTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNYSSII*SIALQQ
Trigger: CTGCTGTAAAGCAATGCTGCAAATAATGCTTGAATA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCTTCCTTACGGTAATTaGTTTAAAAGGTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGLPYGN*FKRWGT
Trigger: GGTGCCCCACCTTTTAAAGCAATTACCGTAAGGAAG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTTACGGTACTATGAGTTaGCACCATGTCATGCAACAT +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLYGTMS*HHVMQH
Trigger: ATGTTGCATGACATGGTGGCAACTCATAGTACCGTA...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCTCCAATTTTCTGTGTaGAAGAGCAATCACACGGAA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLLQFSV*KSNHTE
Trigger: TTCCGTGTGATTGCTCTTGCACACAGAAAATTGGAG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTTTCCCTGATAAGGTTTaGCACACAGGAAATACTAGG +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLFPDKV*HTGNTR
Trigger: CCTAGTATTTCCTGTGTGCCAAACCTTATCAGGGAA...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTGTCTGAGGTTTTGGTaGCCATTCTGGATCAACCAA +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGCLRFW*PFWINQ
Trigger: TTGGTTGATCCAGAATGGCCACCAAAACCTCAGACA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAAGTAGAACCCACACCTaGCTTCACAGGCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQSRTHT*LHRHSS
Trigger: TGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAAATTGCTTTAAAAGGTaGGGCACCGTGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQNCFKR*GTVAHM
Trigger: CATGTGAGCCACGGTGCCCCACCTTTTAAAGCAATT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTTTCCTTTGGGCTCCTaGCACCAGAAAGAATTGCTC +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYFPLGS*HQKELL
Trigger: GAGCAATTCTTTCTGGTGCCAGGAGCCCAAAGGAAA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCAGTGCTTCAAACAATaGAAGATCACCGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYQCFKQ*KITEST
Trigger: TGTGCTTTCGGTGATCTTCCATTGTTTGAAGCACTG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTGTCCATACCTACAGTaGATTAAAGGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYCPYLQ*IKGPVL
Trigger: AAGCACTGGACCTTTAATCCACTGTAGGTATGGACA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATGACCATGACATCTCCTaGCACAAGGTCGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYDHDIS*HKVGRK
Trigger: TTTTCTACCGACCTTGTGCCAGGAGATGTCATGGTC...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCAAAGCAGAAGAAAATaGGAACTGGCGAACAATTCC +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYQSRRK*ELANNS
Trigger: GGAATTGTTCGCCAGTTCCCATTTTCTTCTGCTTTG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTACACGCCACTGATATaGTACACACACTATCTGAAG +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYYTPLI*YTHYLK
Trigger: CTTCAGATAGTGTGTGTACCATATCAGTGGCGTGTA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCAGTGCTTCAAACAATaGAAGATCACTCCTATGTCC +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLQCFKQ*KITPMS
Trigger: GGACATAGGAGTGATCTTCCATTGTTTGAAGCACTG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTGTAGCAAGGTTGCCTaGAGGGTTTTCCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGCSKVA*RVFLLK
Trigger: TTTCAAAAGGAAAACCCTTCAGGCAACCTTGCTACA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCAAAATAGACATGTTCTaGCCTCTGGCGCCACCTAAT +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSKIDMF*PLAPPN
Trigger: ATTAGGTGGCGCCAGAGGTCAGAACATGTCTATTTT...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTTTTTCAGTCTTCTCTaGGCATACACAATACCAGCA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYFFSLL*AYTIPA
Trigger: TGCTGGTATTGTGTATGCTCAGAGAAGACTGAAAAA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCGCATTTTCCACTCGTTaGATCCCCCAAAGATCTAAA +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGAFSTR*IPQRSK
Trigger: TTTAGATCTTTGGGGGATTCAACGAGTGGAAAATGC...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCATGCCATGTCAGTTTTaGCTCCAATTTTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGMPCQF*LQFSVC
Trigger: GCACACAGAAAATTGGAGTCAAAACTGACATGGCAT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTTATTTACCATGCCTTTaGAACTGTGCAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLYLPCL*NCAGLS
Trigger: TGAAAGTCCTGCACAGTTTCAAAGGCATGGTAAATA...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGAATGTATGCCTTTTTaGCAAGAGGGTACCATTCTT +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYECMPF*QEGTIL
Trigger: AAGAATGGTACCCTCTTGTCAAAAAGGCATACATTC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATCAACCAAGAGCTCCTaGGCCAGATACATGTACTTT +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQSTKSS*ARYMYF
Trigger: AAAGTACATGTATCTGGCGCAGGAGCTCTTGGTTGA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTCAACCAAGAGCTCCTaGGCCAGATACATGTACTTT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYSTKSS*ARYMYF
Trigger: AAAGTACATGTATCTGGCGCAGGAGCTCTTGGTTGA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTCAACCAAGAGCTCCTaGGCCAGATACATGTACTTT +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSSTKSS*ARYMYF
Trigger: AAAGTACATGTATCTGGCGCAGGAGCTCTTGGTTGA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTACGGTACTATGAGTTaGCACCATGTCATGCAACAT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGYGTMS*HHVMQH
Trigger: ATGTTGCATGACATGGTGGCAACTCATAGTACCGTA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCACCACACTCATACGTTaGAAAGCAGAAGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGTTLIR*KAEENG
Trigger: CCCATTTTCTTCTGCTTTGCAACGTATGAGTGTGGT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTTCCCTGATAAGGTTTaGCACACAGGAAATACTAGG +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGFPDKV*HTGNTR
Trigger: CCTAGTATTTCCTGTGTGCCAAACCTTATCAGGGAA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTATAAGACCCGAAGGTaGTCTTTGTGCCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSYKTRR*SLCHKF
Trigger: GAACTTGTGGCACAAAGACCACCTTCGGGTCTTATA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATATAAGACCCGAAGGTaGTCTTTGTGCCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQYKTRR*SLCHKF
Trigger: GAACTTGTGGCACAAAGACCACCTTCGGGTCTTATA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTGTCTGAGGTTTTGGTaGCCATTCTGGATCAACCAA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYCLRFW*PFWINQ
Trigger: TTGGTTGATCCAGAATGGCCACCAAAACCTCAGACA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTGTCTGAGGTTTTGGTaGCCATTCTGGATCAACCAA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSCLRFW*PFWINQ
Trigger: TTGGTTGATCCAGAATGGCCACCAAAACCTCAGACA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATGAGCAAGCATGTTACTaGCTCTGGAAGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYEQACY*LWKNRE
Trigger: TTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCAAAATTAGCCATGTGTaGTGGCGTGCATCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSKISHV*WRASVV
Trigger: GACTACAGATGCACGCCACCACACATGGCTAATTTT...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGTTTGGGATACAATATaGAACGAACAAGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLVWDTI*NEQAVL
Trigger: AAGGACAGCTTGTTCGTTCCATATTGTATCCCAAAC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGTTTGGGATACAATATaGAACGAACAAGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYVWDTI*NEQAVL
Trigger: AAGGACAGCTTGTTCGTTCCATATTGTATCCCAAAC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGAAGAAAATGGGAACTaGCGAACAATTCCTATCTCA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYEENGN*RTIPIS
Trigger: TGAGATAGGAATTGTTCGCCAGTTCCCATTTTCTTC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTACACGCCACTGATATaGTACACACACTATCTGAAG +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGYTPLI*YTHYLK
Trigger: CTTCAGATAGTGTGTGTACCATATCAGTGGCGTGTA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTTCATTGTCTACGTGTaGAGAATTCCAAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSFIVYV*RIPKPA
Trigger: AGCGGGTTTTGGAATTCTTCACACGTAGACAATGAA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATGTAGCAAGGTTGCCTaGAGGGTTTTCCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQCSKVA*RVFLLK
Trigger: TTTCAAAAGGAAAACCCTTCAGGCAACCTTGCTACA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGTTATGGTGATGATTTaGCATGATCCATTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYVMVMI*HDPFSL
Trigger: TAAGGAGAATGGATCATGTCAAATCATCACCATAAC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACATTTGGGTTGCTGAATaGAGATATAGGACTTTATGG +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYIWVAE*RYRTLW
Trigger: CCATAAAGTCCTATATCTTCATTCAGCAACCCAAAT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACAGAAACGTTAAAAGATaGATCTACATCTACTGCCGA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYRNVKR*IYIYCR
Trigger: TCGGCAGTAGATGTAGATTCATCTTTTAACGTTTCT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACAACTGCATGGCCATTTaGAAGCTTATTAGACATAGA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYNCMAI*KLIRHR
Trigger: TCTATGTCTAATAAGCTTTCAAATGGCCATGCAGTT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTCCTTTCACATCCACTaGAGGATTTGGCAAATTAGT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGSFHIH*RIWQIS
Trigger: ACTAATTTGCCAAATCCTTCAGTGGATGTGAAAGGA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGCATTTTCCACTCGTTaGATCCCCCAAAGATCTAAA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQAFSTR*IPQRSK
Trigger: TTTAGATCTTTGGGGGATTCAACGAGTGGAAAATGC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCACATTTTCTTCTGGTaGAAGAAATCGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLHIFFW*KKSCIF
Trigger: GAAAATGCACGATTTCTTTCACCAGAAGAAAATGTG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCACATTTTCTTCTGGTaGAAGAAATCGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYHIFFW*KKSCIF
Trigger: GAAAATGCACGATTTCTTTCACCAGAAGAAAATGTG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGGCATAATTCGATTATaGAGTGCTGTTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLGIIRL*SAVSSS
Trigger: TGAAGAAGAAACAGCACTTCATAATCGAATTATGCC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCTGAGACTGATTCACTaGTATGTTATGGTGATGATT +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLLRLIH*YVMVMI
Trigger: AATCATCACCATAACATAGCAGTGAATCAGTCTCAG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCTGAGACTGATTCACTaGTATGTTATGGTGATGATT +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYLRLIH*YVMVMI
Trigger: AATCATCACCATAACATAGCAGTGAATCAGTCTCAG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCATTATTTGCAGCATTaGTTTACAGCAGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGHYLQH*FTAVGA
Trigger: AGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTTGTTTAGATGCAAGTaGAATTGGGAAAGCTTTCGA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYLFRCK*NWESFR
Trigger: TCGAAAGCTTTCCCAATTGCACTTGCATCTAAACAA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACACAGTTTTGTTTAGATaGAAGTGCAATTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYTVLFR*KCNWES
Trigger: GCTTTCCCAATTGCACTTGCATCTAAACAAAACTGT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTTTGCTAAAGACAGTTaGTTCCTTACGGTAATTGCT +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYFAKDS*FLTVIA
Trigger: AGCAATTACCGTAAGGAAGCAACTGTCTTTAGCAAA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCCCCTTTGTCAGTCCTaGACTATGCTTTTCATAAAT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGPLCQS*TMLFIN
Trigger: ATTTATGAAAAGCATAGTGCAGGACTGACAAAGGGG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTACGGTACTATGAGTTaGCACCATGTCATGCAACAT +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSYGTMS*HHVMQH
Trigger: ATGTTGCATGACATGGTGGCAACTCATAGTACCGTA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTTACCAACATCTCATTaGACACATTTTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYLPTSH*THFLLV
Trigger: CACCAGAAGAAAATGTGTGCAATGAGATGTTGGTAA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTTTACCAACATCTCATTaGACACATTTTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLLPTSH*THFLLV
Trigger: CACCAGAAGAAAATGTGTGCAATGAGATGTTGGTAA...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTGTTTCTTCTTCAGTTaGTTCTTCCAGAATCCATCC +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGCFFFS*FFQNPS
Trigger: GGATGGATTCTGGAAGAAGCAACTGAAGAAGAAACA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATACCACACTCATACGTTaGAAAGCAGAAGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYTTLIR*KAEENG
Trigger: CCCATTTTCTTCTGCTTTGCAACGTATGAGTGTGGT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAACTCCAATTTTCTGTGTaGAAGAGCAATCACACGGAA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQLQFSV*KSNHTE
Trigger: TTCCGTGTGATTGCTCTTGCACACAGAAAATTGGAG...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTACTGCAGGGGTTTCTTaGTTTAATTTGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLTAGVS*FNLFCI
Trigger: AATGCAGAACAAATTAAAGCAAGAAACCCCTGCAGT...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATTCCCTGATAAGGTTTaGCACACAGGAAATACTAGG +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQFPDKV*HTGNTR
Trigger: CCTAGTATTTCCTGTGTGCCAAACCTTATCAGGGAA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGCATGTTACTGGCTCTaGAAGAACAGAGAACAATGT +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSACYWL*KNREQC
Trigger: ACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGCATGTTACTGGCTCTaGAAGAACAGAGAACAATGT +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQACYWL*KNREQC
Trigger: ACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTATCTCATAAGTAGCTaGAAGTTCAAACAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYYLISS*KFKQLH
Trigger: ATGGAGCTGTTTGAACTTCCAGCTACTTATGAGATA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATACACGCCACTGATATaGTACACACACTATCTGAAG +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQYTPLI*YTHYLK
Trigger: CTTCAGATAGTGTGTGTACCATATCAGTGGCGTGTA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCCAGTGCTTCAAACAATaGAAGATCACTCCTATGTCC +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSQCFKQ*KITPMS
Trigger: GGACATAGGAGTGATCTTCCATTGTTTGAAGCACTG...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCATTTGGGTTGCTGAATaGAGATATAGGACTTTATGG +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGIWVAE*RYRTLW
Trigger: CCATAAAGTCCTATATCTTCATTCAGCAACCCAAAT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCATAGATTTTGGACTTaGAACTGGGTAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGHRFWT*NWVSFQ
Trigger: TTGGAAACTTACCCAGTTTCAAGTCCAAAATCTATG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTTACACTATGGTGGGTaGAATAACGAATCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYLHYGG*NNESVV
Trigger: CACAACAGATTCGTTATTTCACCCACCATAGTGTAA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTTACACTATGGTGGGTaGAATAACGAATCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSLHYGG*NNESVV
Trigger: CACAACAGATTCGTTATTTCACCCACCATAGTGTAA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTCCTTTCACATCCACTaGAGGATTTGGCAAATTAGT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYSFHIH*RIWQIS
Trigger: ACTAATTTGCCAAATCCTTCAGTGGATGTGAAAGGA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTTTTTCAGTCTTCTCTaGGCATACACAATACCAGCA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSFFSLL*AYTIPA
Trigger: TGCTGGTATTGTGTATGCTCAGAGAAGACTGAAAAA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTATTTACCATGCCTTTaGAACTGTGCAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYYLPCL*NCAGLS
Trigger: TGAAAGTCCTGCACAGTTTCAAAGGCATGGTAAATA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTATTTACCATGCCTTTaGAACTGTGCAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSYLPCL*NCAGLS
Trigger: TGAAAGTCCTGCACAGTTTCAAAGGCATGGTAAATA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATGAATGTATGCCTTTTTaGCAAGAGGGTACCATTCTT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYECMPF*QEGTIL
Trigger: AAGAATGGTACCCTCTTGTCAAAAAGGCATACATTC...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTTTCCGCATCAAATATaGTCATTTGTAACGATCCAA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYFPHQI*SFVTIQ
Trigger: TTGGATCGTTACAAATGAGCATATTTGATGCGGAAA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCTTCGATTATATTTTTaGAGGAATCATCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLLRLYF*RNHQWQ
Trigger: TTGCCACTGATGATTCCTGCAAAAATATAATCGAAG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTTATTCAAGCATTATTTaGAGCATTGCTTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLYSSII*SIALQQ
Trigger: CTGCTGTAAAGCAATGCTGCAAATAATGCTTGAATA...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGGTAGTCAGAAAGTATaGTGTTTCAGATGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQGSQKV*CFRCQE
Trigger: TTCTTGGCATCTGAAACAGCATACTTTCTGACTACC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCCCCCTTTGTCAGTCCTaGACTATGCTTTTCATAAAT +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSPLCQS*TMLFIN
Trigger: ATTTATGAAAAGCATAGTGCAGGACTGACAAAGGGG...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTTTCTCCTGTTAACATaGTTTCGTTTACAATGCAGG +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGFLLLT*FRLQCR
Trigger: CCTGCATTGTAAACGAAAGCATGTTAACAGGAGAAA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATGTTTCTTCTTCAGTTaGTTCTTCCAGAATCCATCC +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQCFFFS*FFQNPS
Trigger: GGATGGATTCTGGAAGAAGCAACTGAAGAAGAAACA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCTGCGTGAGGGAGTCTaGATAATGCCAATTTATTTT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYLREGV*IMPIYF
Trigger: AAAATAAATTGGCATTATGCAGACTCCCTCACGCAG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAACTGCGTGAGGGAGTCTaGATAATGCCAATTTATTTT +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQLREGV*IMPIYF
Trigger: AAAATAAATTGGCATTATGCAGACTCCCTCACGCAG...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTCAATGAAGAGAAACTaGAAGTCTCCTAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGSMKRN*KSPRLL
Trigger: AAGTAACCTAGGAGACTTCCAGTTTCTCTTCATTGA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACATACAAGCAACAAACTaGGATTTTACCAACATCTCA +
Preference number: 4 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYIQATN*DFTNIS
Trigger: TGAGATGTTGGTAAAATCCCAGTTTGTTGCTTGTAT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGAAGAAAATGGGAACTaGCGAACAATTCCTATCTCA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQEENGN*RTIPIS
Trigger: TGAGATAGGAATTGTTCGCCAGTTCCCATTTTCTTC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATGAAGAAAATGGGAACTaGCGAACAATTCCTATCTCA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYEENGN*RTIPIS
Trigger: TGAGATAGGAATTGTTCGCCAGTTCCCATTTTCTTC...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGTTATGGTGATGATTTaGCATGATCCATTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQVMVMI*HDPFSL
Trigger: TAAGGAGAATGGATCATGTCAAATCATCACCATAAC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATATTTGGGTTGCTGAATaGAGATATAGGACTTTATGG +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYIWVAE*RYRTLW
Trigger: CCATAAAGTCCTATATCTTCATTCAGCAACCCAAAT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCATTTGGGTTGCTGAATaGAGATATAGGACTTTATGG +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSIWVAE*RYRTLW
Trigger: CCATAAAGTCCTATATCTTCATTCAGCAACCCAAAT...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATAGAAACGTTAAAAGATaGATCTACATCTACTGCCGA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYRNVKR*IYIYCR
Trigger: TCGGCAGTAGATGTAGATTCATCTTTTAACGTTTCT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATATAACATTCTCAACGTaGATAACCCACCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYITFST*ITHLVY
Trigger: ATAGACAAGGTGGGTTATTCACGTTGAGAATGTTAT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAACATAGATTTTGGACTTaGAACTGGGTAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQHRFWT*NWVSFQ
Trigger: TTGGAAACTTACCCAGTTTCAAGTCCAAAATCTATG...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCAACTGCATGGCCATTTaGAAGCTTATTAGACATAGA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSNCMAI*KLIRHR
Trigger: TCTATGTCTAATAAGCTTTCAAATGGCCATGCAGTT...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAGGCATAATTCGATTATaGAGTGCTGTTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQGIIRL*SAVSSS
Trigger: TGAAGAAGAAACAGCACTTCATAATCGAATTATGCC...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTCTTCCAAAACGTTTTaGAAATCGACAGGAACTGTT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYSSKTF*KSTGTV
Trigger: AACAGTTCCTGTCGATTTTCAAAACGTTTTGGAAGA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR TCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTCTTCCAAAACGTTTTaGAAATCGACAGGAACTGTT +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSSSKTF*KSTGTV
Trigger: AACAGTTCCTGTCGATTTTCAAAACGTTTTGGAAGA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCTGAGACTGATTCACTaGTATGTTATGGTGATGATT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYLRLIH*YVMVMI
Trigger: AATCATCACCATAACATAGCAGTGAATCAGTCTCAG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCTTCGATTATATTTTTaGAGGAATCATCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGLRLYF*RNHQWQ
Trigger: TTGCCACTGATGATTCCTGCAAAAATATAATCGAAG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTATTCAAGCATTATTTaGAGCATTGCTTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGYSSII*SIALQQ
Trigger: CTGCTGTAAAGCAATGCTGCAAATAATGCTTGAATA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTTGTTTAGATGCAAGTaGAATTGGGAAAGCTTTCGA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSLFRCK*NWESFR
Trigger: TCGAAAGCTTTCCCAATTGCACTTGCATCTAAACAA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAACAGTTTTGTTTAGATaGAAGTGCAATTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQTVLFR*KCNWES
Trigger: GCTTTCCCAATTGCACTTGCATCTAAACAAAACTGT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGTTGCCACCATGTCATaGAACATAACATATTGCTTT +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSVATMS*NITYCF
Trigger: AAAGCAATATGTTATGTTGCATGACATGGTGGCAAC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATTTCTCCTGTTAACATaGTTTCGTTTACAATGCAGG +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQFLLLT*FRLQCR
Trigger: CCTGCATTGTAAACGAAAGCATGTTAACAGGAGAAA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTTTCTCCTGTTAACATaGTTTCGTTTACAATGCAGG +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYFLLLT*FRLQCR
Trigger: CCTGCATTGTAAACGAAAGCATGTTAACAGGAGAAA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTTACCAACATCTCATTaGACACATTTTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYLPTSH*THFLLV
Trigger: CACCAGAAGAAAATGTGTGCAATGAGATGTTGGTAA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCCGAATGTTGGCTTTATaGAAATCTTCAAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSRMLAL*KSSSTA
Trigger: TGCAGTACTTGAAGATTTGCATAAAGCCAACATTCG...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAACGAATGTTGGCTTTATaGAAATCTTCAAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQRMLAL*KSSSTA
Trigger: TGCAGTACTTGAAGATTTGCATAAAGCCAACATTCG...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCGAATGTTGGCTTTATaGAAATCTTCAAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYRMLAL*KSSSTA
Trigger: TGCAGTACTTGAAGATTTGCATAAAGCCAACATTCG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATCAATGAAGAGAAACTaGAAGTCTCCTAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQSMKRN*KSPRLL
Trigger: AAGTAACCTAGGAGACTTCCAGTTTCTCTTCATTGA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCAGATGCAAGTGCAATTaGGAAAGCTTTCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSRCKCN*ESFRIS
Trigger: TGAAATTCGAAAGCTTTCCCAATTGCACTTGCATCT...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATAGATGCAAGTGCAATTaGGAAAGCTTTCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYRCKCN*ESFRIS
Trigger: TGAAATTCGAAAGCTTTCCCAATTGCACTTGCATCT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTATCTCATAAGTAGCTaGAAGTTCAAACAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYYLISS*KFKQLH
Trigger: ATGGAGCTGTTTGAACTTCCAGCTACTTATGAGATA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTCCTCTAAGCTATCATaGACCAATTTAACCGGAATA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSSSKLS*TNLTGI
Trigger: TATTCCGGTTAAATTGGTCCATGATAGCTTAGAGGA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTCCTCTAAGCTATCATaGACCAATTTAACCGGAATA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYSSKLS*TNLTGI
Trigger: TATTCCGGTTAAATTGGTCCATGATAGCTTAGAGGA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCGATCCACTGACTCCTaGACAAAATATAAAGTAATA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYRSTDS*TKYKVI
Trigger: TATTACTTTATATTTTGTGCAGGAGTCAGTGGATCG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429136.6
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTTTCCGCATCAAATATaGTCATTTGTAACGATCCAA +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYFPHQI*SFVTIQ
Trigger: TTGGATCGTTACAAATGAGCATATTTGATGCGGAAA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTTTCCGCATCAAATATaGTCATTTGTAACGATCCAA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSFPHQI*SFVTIQ
Trigger: TTGGATCGTTACAAATGAGCATATTTGATGCGGAAA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCCTTCGATTATATTTTTaGAGGAATCATCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSLRLYF*RNHQWQ
Trigger: TTGCCACTGATGATTCCTGCAAAAATATAATCGAAG...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR GCA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCATGTTGTTCTCAATTaGATCTCTGCTAATATTCTG +
Preference number: 4 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYHVVLN*ISANIL
Trigger: CAGAATATTAGCAGAGATGCAATTGAGAACAACATG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CCA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAATACAAGCAACAAACTaGGATTTTACCAACATCTCA +
Preference number: 4 (lower is better)
Translates to: FLPEISASNMLICNDPIQIQATN*DFTNIS
Trigger: TGAGATGTTGGTAAAATCCCAGTTTGTTGCTTGTAT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS CCA 90 bp CAAACACCAAGATTCAGGGATGTCTGTCAGATCGGGGCCGCTCACTaGCCGCCGCCGCGCCGCCTCCTCCGCGGCCTCCCTCGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: QTPRFRDVCQIGAAH*PPPRRLLRGLPRGR
Trigger: CCGGCCGCGAGGGAGGCCGCGGAGGAGGCGGCGCGGCGGCGGCCAGTGAGCGGCCCCGATCTGACAGACATCCCTGAATCTTGGTGTTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645319.2
ENST00000645538.1
CDS GCA 90 bp AGCACGGTGTGTCAGCTAGTTAGTCTCCTGCTAGGACACCAGCTGTaGACCGGTGATGCCAAGTACCCTCTGACGAAGCAGGTTAAGTGT +
Preference number: 5 (lower is better)
Translates to: STVCQLVSLLLGHQL*TGDAKYPLTKQVKC
Trigger: ACACTTAACCTGCTTCGTCAGAGGGTACTTGGCATCACCGGTGCACAGCTGGTGTCCTAGCAGGAGACTAACTAGCTGACACACCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS TCA 90 bp AAACTCTGGATTATCTGTTTAAGCACCCAGACTTCCACCTCCTCATaGGCCAGGACCTTCCTCAGCCACATCTGGATCCTCAGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: KLWIICLSTQTSTSS*ARTFLSHIWILSPS
Trigger: TGAGGGGCTGAGGATCCAGATGTGGCTGAGGAAGGTCCTGGCTCATGAGGAGGTGGAAGTCTGGGTGCTTAAACAGATAATCCAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCCCATCTACAGCTGGTaGACTGAGTTTCCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCPIYSW*TEFPLG
Trigger: GCCCAAAGGAAACTCAGTCAACCAGCTGTAGATGGG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTCAGGAAGCAGTTGTTaGGGAGGACGAACCACTGTG +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCSGSSC*GGRTTV
Trigger: CACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTGA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS TCA 90 bp AGGGATGGCCAGTCACTTGTGACCTACTTTCAGAGCTGGCAGTTCTaGCTTCTAGAACAAACTCGGAACAAGCCCATCTACAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RDGQSLVTYFQSWQF*LLEQTRNKPIYSWL
Trigger: CAACCAGCTGTAGATGGGCTTGTTCCGAGTTTGTTCTAGAAGTCAGAACTGCCAGCTCTGAAAGTAGGTCACAAGTGACTGGCCATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS GCA 90 bp GAATTCATCAGTAGTCCTCAGCAGCACTACTTCACAGTCTTTAATTaGAGCTCTGACACAGGTCGCTTTCACCCGCCACTCAGGCATCCA +
Preference number: 5 (lower is better)
Translates to: EFISSPQQHYFTVFN*SSDTGRFHPPLRHP
Trigger: TGGATGCCTGAGTGGCGGGTGAAAGCGACCTGTGTCAGAGCTGCAATTAAAGACTGTGAAGTAGTGCTGCTGAGGACTACTGATGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS GCA 90 bp AGTAAATCAAAGCGGCTTCTGCCTCCAAGGCCCATGATGCTGTGCTaGCTCCTTTACCTCTTCAACATCTTGCCAGACAAGTTACACGTC +
Preference number: 5 (lower is better)
Translates to: SKSKRLLPPRPMMLC*LLYLFNILPDKLHV
Trigger: GACGTGTAACTTGTCTGGCAAGATGTTGAAGAGGTAAAGGAGGCAGCACAGCATCATGGGCCTTGGAGGCAGAAGCCGCTTTGATTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS GCA 90 bp CTGAGTAAATCAAAGCGGCTTCTGCCTCCAAGGCCCATGATGCTGTaGTGCCTCCTTTACCTCTTCAACATCTTGCCAGACAAGTTACAC +
Preference number: 5 (lower is better)
Translates to: LSKSKRLLPPRPMML*CLLYLFNILPDKLH
Trigger: GTGTAACTTGTCTGGCAAGATGTTGAAGAGGTAAAGGAGGCAGCACAGCATCATGGGCCTTGGAGGCAGAAGCCGCTTTGATTTACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS CCA 90 bp GGGCTCCTGGCACCAGAAAGAATTGCTCACTGGAAGGATCATAGGTaGCACTCATGTCTCACTGCCCCACTCAGGTATGTAGATTTTCAT +
Preference number: 5 (lower is better)
Translates to: GLLAPERIAHWKDHR*HSCLTAPLRYVDFH
Trigger: ATGAAAATCTACATACCTGAGTGGGGCAGTGAGACATGAGTGCCACCTATGATCCTTCCAGTGAGCAATTCTTTCTGGTGCCAGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS CCA 90 bp AACAAGCCCATCTACAGCTGGTTGACTGAGTTTCCTTTGGGCTCCTaGCACCAGAAAGAATTGCTCACTGGAAGGATCATAGGTGGCACT +
Preference number: 5 (lower is better)
Translates to: NKPIYSWLTEFPLGS*HQKELLTGRIIGGT
Trigger: AGTGCCACCTATGATCCTTCCAGTGAGCAATTCTTTCTGGTGCCAGGAGCCCAAAGGAAACTCAGTCAACCAGCTGTAGATGGGCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTCAGGAAGCAGTTGTTaGGGAGGACGAACCACTGTG +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFSGSSC*GGRTTV
Trigger: CACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTGA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS TCA 90 bp ACTTCTAGAACAAACTCGGAACAAGCCCATCTACAGCTGGTTGACTaGGTTTCCTTTGGGCTCCTGGCACCAGAAAGAATTGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: TSRTNSEQAHLQLVD*VSFGLLAPERIAHW
Trigger: CCAGTGAGCAATTCTTTCTGGTGCCAGGAGCCCAAAGGAAACTCAGTCAACCAGCTGTAGATGGGCTTGTTCCGAGTTTGTTCTAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS TCA 90 bp AAAGCCTGTCATTCACTGGCCTGTATAGTCATTAAAAACTTTCCCTaGCCTTTGCAGCTACTTCCTGTGAGCAGCCCAGGGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: KACHSLACIVIKNFP*PLQLLPVSSPGMAS
Trigger: ACTGGCCATCCCTGGGCTGCTCACAGGAAGTAGCTGCAAAGGTCAGGGAAAGTTTTTAATGACTATACAGGCCAGTGAATGACAGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTGGTTGTCTGAGGTTTaGGTGGCCATTCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCWLSEV*VAILDQ
Trigger: TTGATCCAGAATGGCCACCAAAACCTCAGACAACCA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTCAAACCCAGACACTTaGCTCCAGGGCCAAACTCTT +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFSNPDT*LQGQTL
Trigger: AAGAGTTTGGCCCTGGAGCAAAGTGTCTGGGTTTGA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTAGATTCAGGAAGCAGTaGTTTGGGAGGACGAACCAC +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFRFRKQ*FGRTNH
Trigger: GTGGTTCGTCCTCCCAAACAACTGCTTCCTGAATCT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS TCA 90 bp CATGATCCATTCTCCTTAACTAAAGCTTTAGCTTCTGTGGTTGTCTaGGGTTTTGGTGGCCATTCTGGATCAACCAAGAGCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: HDPFSLTKALASVVV*GFGGHSGSTKSSCA
Trigger: GGCGCAGGAGCTCTTGGTTGATCCAGAATGGCCACCAAAACCTCAGACAACCACAGAAGCTAAAGCTTTAGTTAAGGAGAATGGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000461660.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS GCA 90 bp CTCATAAGTAGCTGGAAGTTCAAACAGCTCCATTTCTTGGTTTCCTaGAGGGGTAGATTCAGGAAGCAGTTGTTTGGGAGGACGAACCAC +
Preference number: 5 (lower is better)
Translates to: LISSWKFKQLHFLVS*RGRFRKQLFGRTNH
Trigger: GTGGTTCGTCCTCCCAAACAACTGCTTCCTGAATCTACCCCTGCAGGAAACCAAGAAATGGAGCTGTTTGAACTTCCAGCTACTTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTGGTTGTCTGAGGTTTaGGTGGCCATTCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFWLSEV*VAILDQ
Trigger: TTGATCCAGAATGGCCACCAAAACCTCAGACAACCA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCAACTTTCCCATCCTTaGGAGGTAATGCTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCQLSHP*EVMLQQ
Trigger: TTGCTGAAGCATTACCTCCAAAGGATGGGAAAGTTG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS CCA 90 bp CAGCACCCTGGCAACCACACTCATACGTTGCAAAGCAGAAGAAAATaGGAACTGGCGAACAATTCCTATCTCATAAGTAGCTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: QHPGNHTHTLQSRRK*ELANNSYLISSWKF
Trigger: GAACTTCCAGCTACTTATGAGATAGGAATTGTTCGCCAGTTCCCATTTTCTTCTGCTTTGCAACGTATGAGTGTGGTTGCCAGGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTCTTAGGAACAAGGTCTaGAAAATGCTCCAGTATCAC +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCLRNKV*KMLQYH
Trigger: GTGATACTGGAGCATTTTCAAGACCTTGTTCCTAAG...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACACCCGAAGGTGGTCTTaGTGCCACAAGTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNTRRWS*CHKFFP
Trigger: TGGAAAGAACTTGTGGCACAAAGACCACCTTCGGGT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTACATGTACTTTGCCTTaGGTGTCTTCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCTCTLP*VSSFYS
Trigger: GCTGTAGAAAGAAGACACCAAAGGCAAAGTACATGT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTTGACTGAGTTTCCTTaGGGCTCCTGGCACCAGAAA +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNLTEFP*GSWHQK
Trigger: TTTCTGGTGCCAGGAGCCCAAAGGAAACTCAGTCAA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTTACGGTACTATGAGTaGCCACCATGTCATGCAACA +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFLRYYE*PPCHAT
Trigger: TGTTGCATGACATGGTGGCAACTCATAGTACCGTAA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS GCA 90 bp TGGCACTCATGTCTCACTGCCCCACTCAGGTATGTAGATTTTCATTaGCCTATAAACCACAGTCAACATCTCAAGATCTCCAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: WHSCLTAPLRYVDFH*PINHSQHLKISRRM
Trigger: CATCCTTCTGGAGATCTTGAGATGTTGACTGTGGTTTATAGGGCAATGAAAATCTACATACCTGAGTGGGGCAGTGAGACATGAGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS GCA 90 bp CTTCCTTTCTTCCCTGTCCATACCTACAGTGGATTAAAGGTCCAGTaGTTCAAACAATGGAAGATCACCGAAAGCACAGCCAGGATTCAA +
Preference number: 5 (lower is better)
Translates to: LPFFPVHTYSGLKVQ*FKQWKITESTARIQ
Trigger: TTGAATCCTGGCTGTGCTTTCGGTGATCTTCCATTGTTTGAAGCACTGGACCTTTAATCCACTGTAGGTATGGACAGGGAAGAAAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTACAAGCATCTGATTTaGGATGCCACACTTCATACC +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFYKHLI*DATLHT
Trigger: GGTATGAAGTGTGGCATCCAAAATCAGATGCTTGTA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTAAAACCCGCTTCCTGTaGTATTACAAGCATCTGATT +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCKTRFL*YYKHLI
Trigger: AATCAGATGCTTGTAATACAACAGGAAGCGGGTTTT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTCAAGTTCGGTTTCATaGTCTACGTGTGAAGAATTC +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCSSSVS*STCEEF
Trigger: GAATTCTTCACACGTAGACAATGAAACCGAACTTGA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTGGTTGTCTGAGGTTTaGGTGGCCATTCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNWLSEV*VAILDQ
Trigger: TTGATCCAGAATGGCCACCAAAACCTCAGACAACCA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTGGAGATTACCTGAGTaGTTCTATAAGCAACACCAT +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCWRLPE*FYKQHH
Trigger: ATGGTGTTGCTTATAGAACAACTCAGGTAATCTCCA...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCAGCCATTTAAGAGCTTaGAGAGGCGTCTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: EQACYWLWKNREQCHTVFSHLRA*RGVSRR
Trigger: CCTTCTTGAGACGCCTCTCAAAGCTCTTAAATGGCT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGTCTTCCAAAACGTTTaGAAAATCGACAGGAACTGT +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCVFQNV*KIDRNC
Trigger: ACAGTTCCTGTCGATTTTCAAAACGTTTTGGAAGAC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS TCA 90 bp TTCCCATCCTTTGGAGGTAATGCTTCAGCAATAATCACTTTATCCTaGGGTAGAATCATTCCACAATCTCTGGCCACAGAGACAGCAGTC +
Preference number: 5 (lower is better)
Translates to: FPSFGGNASAIITLS*GRIIPQSLATETAV
Trigger: GACTGCTGTCTCTGTGGCCAGAGATTGTGGAATGATTCTACCTCAGGATAAAGTGATTATTGCTGAAGCATTACCTCCAAAGGATGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439040.5
ENST00000484023.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTATTTTTGTAGCAAGGTaGCCTGAAGGGTTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFIFVAR*PEGFSF
Trigger: AAAGGAAAACCCTTCAGGCAACCTTGCTACAAAAAT...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGACCATCATAGGGAATaGGCATATGTTTATACAGAA +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCDHHRE*AYVYTE
Trigger: TTCTGTATAAACATATGCCAATTCCCTATGATGGTC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTATTGCTTTACAGCAGTaGGTGCTAGAAGATACAAAA +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCIALQQ*VLEDTK
Trigger: TTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAAT...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGCATTATTTGCAGCATaGCTTTACAGCAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNALFAA*LYSSWC
Trigger: GCACCAACTGCTGTAAAGCAATGCTGCAAATAATGC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGCATTATTTGCAGCATaGCTTTACAGCAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: EQACYWLWKNREQCHTVFALFAA*LYSSWC
Trigger: GCACCAACTGCTGTAAAGCAATGCTGCAAATAATGC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGTATTCAAGCATTATTaGCAGCATTGCTTTACAGCA +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCVFKHY*QHCFTA
Trigger: TGCTGTAAAGCAATGCTGCAAATAATGCTTGAATAC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTGTTGGCTTAGCCACTaGTATTCAAGCATTATTTGC +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFCWLSH*YSSIIC
Trigger: GCAAATAATGCTTGAATACAAGTGGCTAAGCCAACA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTTGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTGTATGTAGATTTTCATaGCCCTATAAACCACAGTCA +
Preference number: 5 (lower is better)
Translates to: CCGNCGRCQTAGSTYKRCVCRFS*PYKPQS
Trigger: TGACTGTGGTTTATAGGGCAATGAAAATCTACATAC...ACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTGGCACCAGAAAGAATaGCTCACTGGAAGGATCATA +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNWHQKE*LTGRII
Trigger: TATGATCCTTCCAGTGAGCAATTCTTTCTGGTGCCA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGTTAGAGTTCCAGTCTaGTCAAAGCAAACAAGATTG +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFVRVPV*SKQTRL
Trigger: CAATCTTGTTTGCTTTGACAAGACTGGAACTCTAAC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTGTCTTCCAAAACGTTTaGAAAATCGACAGGAACTGT +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFVFQNV*KIDRNC
Trigger: ACAGTTCCTGTCGATTTTCAAAACGTTTTGGAAGAC...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGTGGTAACTGTGGGCGTTGCCAGACTGCTGGATCCACCTATAAAAGGTGTTTTTATGCCATGTCAGTTTaGACTCCAATTTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: CGNCGRCQTAGSTYKRCFYAMSV*TPIFCV
Trigger: CACACAGAAAATTGGAGTCAAAACTGACATGGCATA...AAAACACCTTTTATAGGTGGATCCAGCAGTCTGGCAACGCCCACAGTTACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCCGATACTCTCCTTGTTaGTCTCGGTTGAACACAACT +
Preference number: 5 (lower is better)
Translates to: EQACYWLWKNREQCHTVFRYSPC*SRLNTT
Trigger: AGTTGTGTTCAACCGAGACAAACAAGGAGAGTATCG...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS TCA 90 bp CTCCAGGGCCAAACTCTTGACCACTATAACCAAATGAAGCCAGAGTaGTTCACCAGAATGAGTTCATCTCGCATCAAAACTCTGGATTAT +
Preference number: 5 (lower is better)
Translates to: LQGQTLDHYNQMKPE*FTRMSSSRIKTLDY
Trigger: ATAATCCAGAGTTTTGATGCGAGATGAACTCATTCTGGTGAATCACTCTGGCTTCATTTGGTTATAGTGGTCAAGAGTTTGGCCCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS TCA 90 bp AATACTTACTCAACATTTTGCAATGCTTCTATCAACTGTGTCTTCTaGTCAGGTGCCATACGGGCAAACACGGTGCCATGCAACATCAAC +
Preference number: 5 (lower is better)
Translates to: NTYSTFCNASINCVF*SGAIRANTVPCNIN
Trigger: GTTGATGTTGCATGGCACCGTGTTTGCCCGTATGGCACCTGATCAGAAGACACAGTTGATAGAAGCATTGCAAAATGTTGAGTAAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484023.1
CDS GCA 90 bp GATCTCCAGAAGGATGTTTATGATCTTCTATTTGCTAAAGACAGTTaGTTCCTTACGGTAATTGCTTTAAAAGGTGGGGCACCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: DLQKDVYDLLFAKDS*FLTVIALKGGAPWL
Trigger: GAGCCACGGTGCCCCACCTTTTAAAGCAATTACCGTAAGGAAGCAACTGTCTTTAGCAAATAGAAGATCATAAACATCCTTCTGGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS GCA 90 bp TCTTCTCTGAGCATACACAATACCAGCAGTCATTGCAGCAGGAAGTaGAGGGGGCACAGTAATTGTGATAATATCAAGAGACTCGATAAT +
Preference number: 5 (lower is better)
Translates to: SSLSIHNTSSHCSRK*RGHSNCDNIKRLDN
Trigger: ATTATCGAGTCTCTTGATATTATCACAATTACTGTGCCCCCTGCACTTCCTGCTGCAATGACTGCTGGTATTGTGTATGCTCAGAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS GCA 90 bp CTTCCTTTCTTCCCTGTCCATACCTACAGTGGATTAAAGGTCCAGTaGTTCAAACAATGGAAGATCACTCCTATGTCCAAACACCAAGAT +
Preference number: 5 (lower is better)
Translates to: LPFFPVHTYSGLKVQ*FKQWKITPMSKHQD
Trigger: ATCTTGGTGTTTGGACATAGGAGTGATCTTCCATTGTTTGAAGCACTGGACCTTTAATCCACTGTAGGTATGGACAGGGAAGAAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645319.2
ENST00000645538.1
CDS CCA 90 bp GGAGGAGGAGAAACCCACCAGAGCAAATCACTCCTAAAGAAACTATaGCAAGCTTCCAGCGACTCAAATTGTAACCATAAATCTCCATTT +
Preference number: 5 (lower is better)
Translates to: GGGETHQSKSLLKKL*QASSDSNCNHKSPF
Trigger: AAATGGAGATTTATGGTTACAATTTGAGTCGCTGGAAGCTTGCCATAGTTTCTTTAGGAGTGATTTGCTCTGGTGGGTTTCTCCTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000446356.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACCTTAGGAACAAGGTCTaGAAAATGCTCCAGTATCAC +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNLRNKV*KMLQYH
Trigger: GTGATACTGGAGCATTTTCAAGACCTTGTTCCTAAG...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTACAAGCATCTGATTTaGGATGCCACACTTCATACC +
Preference number: 5 (lower is better)
Translates to: EQACYWLWKNREQCHTVFYKHLI*DATLHT
Trigger: GGTATGAAGTGTGGCATCCAAAATCAGATGCTTGTA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACACATGTACTTTGCCTTaGGTGTCTTCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNTCTLP*VSSFYS
Trigger: GCTGTAGAAAGAAGACACCAAAGGCAAAGTACATGT...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCAGGCATGCATCCCCTTaGTCAGTCCTGCACTATGCT +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGRHASP*SVLHYA
Trigger: AGCATAGTGCAGGACTGACAAAGGGGATGCATGCCT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS GCA 90 bp AACATACTGTCACCTGTGACCATGACGGTGCGAATGTTGGCTTTATaGAAATCTTCAAGTACTGCAGGGGTTTCTTGCTTTAATTTGTTC +
Preference number: 5 (lower is better)
Translates to: NILSPVTMTVRMLAL*KSSSTAGVSCFNLF
Trigger: GAACAAATTAAAGCAAGAAACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCGCACCGTCATGGTCACAGGTGACAGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS GCA 90 bp GACTATACAAAGTGGGTAAGGAAGATTCAAGTTGAATGGTATGTCTaGCCTGGCATCCCCATTATATTCAGCAACAGCAGAACAAGAAGA +
Preference number: 5 (lower is better)
Translates to: DYTKWVRKIQVEWYV*PGIPIIFSNSRTRR
Trigger: TCTTCTTGTTCTGCTGTTGCTGAATATAATGGGGATGCCAGGGCAGACATACCATTCAACTTGAATCTTCCTTACCCACTTTGTATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS-3UTR CAA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCTCAAGTTCGGTTTCATaGTCTACGTGTGAAGAATTC +
Preference number: 5 (lower is better)
Translates to: EQACYWLWKNREQCHTVFSSSVS*STCEEF
Trigger: GAATTCTTCACACGTAGACAATGAAACCGAACTTGA...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTCAAGTTCGGTTTCATaGTCTACGTGTGAAGAATTC +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNSSSVS*STCEEF
Trigger: GAATTCTTCACACGTAGACAATGAAACCGAACTTGA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTGGTTGTCTGAGGTTTaGGTGGCCATTCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYWLSEV*VAILDQ
Trigger: TTGATCCAGAATGGCCACCAAAACCTCAGACAACCA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATAGGCATGCATCCCCTTaGTCAGTCCTGCACTATGCT +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYRHASP*SVLHYA
Trigger: AGCATAGTGCAGGACTGACAAAGGGGATGCATGCCT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAAGGCATGCATCCCCTTaGTCAGTCCTGCACTATGCT +
Preference number: 5 (lower is better)
Translates to: FLPEISASNMLICNDPIQRHASP*SVLHYA
Trigger: AGCATAGTGCAGGACTGACAAAGGGGATGCATGCCT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCGTTAGAGTTCCAGTCTaGTCAAAGCAAACAAGATTG +
Preference number: 5 (lower is better)
Translates to: EQACYWLWKNREQCHTVFVRVPV*SKQTRL
Trigger: CAATCTTGTTTGCTTTGACAAGACTGGAACTCTAAC...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATCAGGAAGCAGTTGTTaGGGAGGACGAACCACTGTG +
Preference number: 5 (lower is better)
Translates to: FLPEISASNMLICNDPIQSGSSC*GGRTTV
Trigger: CACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTGA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTCAGGAAGCAGTTGTTaGGGAGGACGAACCACTGTG +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYSGSSC*GGRTTV
Trigger: CACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTGA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCAGATTCAGGAAGCAGTaGTTTGGGAGGACGAACCAC +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGRFRKQ*FGRTNH
Trigger: GTGGTTCGTCCTCCCAAACAACTGCTTCCTGAATCT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGTCTTCCAAAACGTTTaGAAAATCGACAGGAACTGT +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNVFQNV*KIDRNC
Trigger: ACAGTTCCTGTCGATTTTCAAAACGTTTTGGAAGAC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACTATGCCATGTCAGTTTaGACTCCAATTTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNYAMSV*TPIFCV
Trigger: CACACAGAAAATTGGAGTCAAAACTGACATGGCATA...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGAACCGATACTCTCCTaGTTTGTCTCGGTTGAACAC +
Preference number: 5 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLEPILS*FVSVEH
Trigger: GTGTTCAACCGAGACAAACAAGGAGAGTATCGGTTC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTGGTTGTCTGAGGTTTaGGTGGCCATTCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGWLSEV*VAILDQ
Trigger: TTGATCCAGAATGGCCACCAAAACCTCAGACAACCA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CTGAGTAGAACCCACACCTGGCTTCACAGGCATTCTTCAAATAACATTCTCAACGACCATCATAGGGAATaGGCATATGTTTATACAGAA +
Preference number: 5 (lower is better)
Translates to: LSRTHTWLHRHSSNNILNDHHRE*AYVYTE
Trigger: TTCTGTATAAACATATGCCAATTCCCTATGATGGTC...GTTGAGAATGTTATTTGAAGAATGCCTGTGAAGCCAGGTGTGGGTTCTACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp GAGCAAGCATGTTACTGGCTCTGGAAGAACAGAGAACAATGTCACACTGTTTTCATTGCTTTACAGCAGTaGGTGCTAGAAGATACAAAA +
Preference number: 5 (lower is better)
Translates to: EQACYWLWKNREQCHTVFIALQQ*VLEDTK
Trigger: TTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAAT...GAAAACAGTGTGACATTGTTCTCTGTTCTTCCAGAGCCAGTAACATGCTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGCATTATTTGCAGCATaGCTTTACAGCAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYALFAA*LYSSWC
Trigger: GCACCAACTGCTGTAAAGCAATGCTGCAAATAATGC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATAGATTCAGGAAGCAGTaGTTTGGGAGGACGAACCAC +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYRFRKQ*FGRTNH
Trigger: GTGGTTCGTCCTCCCAAACAACTGCTTCCTGAATCT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAAGATTCAGGAAGCAGTaGTTTGGGAGGACGAACCAC +
Preference number: 5 (lower is better)
Translates to: FLPEISASNMLICNDPIQRFRKQ*FGRTNH
Trigger: GTGGTTCGTCCTCCCAAACAACTGCTTCCTGAATCT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCCTTGTTTGTCTCGGTaGAACACAACTTTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLPCLSR*NTTFQR
Trigger: CCTTTGGAAAGTTGTGTTCAACCGAGACAAACAAGG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS TCA 90 bp TCAAGTGGATCACCAGAGAGCACTCCTTCAATTTTTGTAAGTGAATaGCAAGTAGCCATACAAGCAACAAACTGGGATTTTACCAACATC +
Preference number: 5 (lower is better)
Translates to: SSGSPESTPSIFVSE*QVAIQATNWDFTNI
Trigger: GATGTTGGTAAAATCCCAGTTTGTTGCTTGTATGGCTACTTGTCATTCACTTACAAAAATTGAAGGAGTGCTCTCTGGTGATCCACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS TCA 90 bp CAGATCAAGTGGATCACCAGAGAGCACTCCTTCAATTTTTGTAAGTaGATGACAAGTAGCCATACAAGCAACAAACTGGGATTTTACCAA +
Preference number: 5 (lower is better)
Translates to: QIKWITREHSFNFCK*MTSSHTSNKLGFYQ
Trigger: TTGGTAAAATCCCAGTTTGTTGCTTGTATGGCTACTTGTCATTCACTTACAAAAATTGAAGGAGTGCTCTCTGGTGATCCACTTGATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS-3UTR CAA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCTTAGGAACAAGGTCTaGAAAATGCTCCAGTATCAC +
Preference number: 5 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYLRNKV*KMLQYH
Trigger: GTGATACTGGAGCATTTTCAAGACCTTGTTCCTAAG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTCTTAGGAACAAGGTCTaGAAAATGCTCCAGTATCAC +
Preference number: 5 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLLRNKV*KMLQYH
Trigger: GTGATACTGGAGCATTTTCAAGACCTTGTTCCTAAG...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACACATGTACTTTGCCTTaGGTGTCTTCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYTCTLP*VSSFYS
Trigger: GCTGTAGAAAGAAGACACCAAAGGCAAAGTACATGT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCAGCCATTTAAGAGCTTaGAGAGGCGTCTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSSHLRA*RGVSRR
Trigger: CCTTCTTGAGACGCCTCTCAAAGCTCTTAAATGGCT...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCGCATTATTTGCAGCATaGCTTTACAGCAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGALFAA*LYSSWC
Trigger: GCACCAACTGCTGTAAAGCAATGCTGCAAATAATGC...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTTACGGTACTATGAGTaGCCACCATGTCATGCAACA +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGLRYYE*PPCHAT
Trigger: TGTTGCATGACATGGTGGCAACTCATAGTACCGTAA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACATGACGGTGCGAATGTaGGCTTTATGCAAATCTTCA +
Preference number: 5 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYMTVRM*ALCKSS
Trigger: TGAAGATTTGCATAAAGCCAACATTCGCACCGTCAT...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTATGACGGTGCGAATGTaGGCTTTATGCAAATCTTCA +
Preference number: 5 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLMTVRM*ALCKSS
Trigger: TGAAGATTTGCATAAAGCCAACATTCGCACCGTCAT...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGAACCGATACTCTCCTaGTTTGTCTCGGTTGAACAC +
Preference number: 5 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSEPILS*FVSVEH
Trigger: GTGTTCAACCGAGACAAACAAGGAGAGTATCGGTTC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS TCA 90 bp GCAATACCACTGAGACTGATTCACTGCTATGTTATGGTGATGATTTaGCATGATCCATTCTCCTTAACTAAAGCTTTAGCTTCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: AIPLRLIHCYVMVMI*HDPFSLTKALASVV
Trigger: AACCACAGAAGCTAAAGCTTTAGTTAAGGAGAATGGATCATGTCAAATCATCACCATAACATAGCAGTGAATCAGTCTCAGTGGTATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000461660.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTACAAGCATCTGATTTaGGATGCCACACTTCATACC +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGYKHLI*DATLHT
Trigger: GGTATGAAGTGTGGCATCCAAAATCAGATGCTTGTA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTAAAACCCGCTTCCTGTaGTATTACAAGCATCTGATT +
Preference number: 5 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLKTRFL*YYKHLI
Trigger: AATCAGATGCTTGTAATACAACAGGAAGCGGGTTTT...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTGGAGATTACCTGAGTaGTTCTATAAGCAACACCAT +
Preference number: 5 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYWRLPE*FYKQHH
Trigger: ATGGTGTTGCTTATAGAACAACTCAGGTAATCTCCA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCGCATTATTTGCAGCATaGCTTTACAGCAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSALFAA*LYSSWC
Trigger: GCACCAACTGCTGTAAAGCAATGCTGCAAATAATGC...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACTGTTGGCTTAGCCACTaGTATTCAAGCATTATTTGC +
Preference number: 5 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYCWLSH*YSSIIC
Trigger: GCAAATAATGCTTGAATACAAGTGGCTAAGCCAACA...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTTGTTGGCTTAGCCACTaGTATTCAAGCATTATTTGC +
Preference number: 5 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLCWLSH*YSSIIC
Trigger: GCAAATAATGCTTGAATACAAGTGGCTAAGCCAACA...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTTACGGTACTATGAGTaGCCACCATGTCATGCAACA +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYLRYYE*PPCHAT
Trigger: TGTTGCATGACATGGTGGCAACTCATAGTACCGTAA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACGTTAGAGTTCCAGTCTaGTCAAAGCAAACAAGATTG +
Preference number: 5 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYVRVPV*SKQTRL
Trigger: CAATCTTGTTTGCTTTGACAAGACTGGAACTCTAAC...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TGCCATTCTGACACACAGGATCAGAAACTCCTAAAATCACATATTCCTGAATACCCCATAAAATCCATGTaGTTCTCAATTGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: CHSDTQDQKLLKSHIPEYPIKSM*FSIASL
Trigger: CAGAGATGCAATTGAGAACAACATGGATTTTATGGG...GTATTCAGGAATATGTGATTTTAGGAGTTTCTGATCCTGTGTGTCAGAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCATGACGGTGCGAATGTaGGCTTTATGCAAATCTTCA +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGMTVRM*ALCKSS
Trigger: TGAAGATTTGCATAAAGCCAACATTCGCACCGTCAT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCAACTTTCCCATCCTTaGGAGGTAATGCTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYQLSHP*EVMLQQ
Trigger: TTGCTGAAGCATTACCTCCAAAGGATGGGAAAGTTG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCCAACTTTCCCATCCTTaGGAGGTAATGCTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSQLSHP*EVMLQQ
Trigger: TTGCTGAAGCATTACCTCCAAAGGATGGGAAAGTTG...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCCTTGTTTGTCTCGGTaGAACACAACTTTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYPCLSR*NTTFQR
Trigger: CCTTTGGAAAGTTGTGTTCAACCGAGACAAACAAGG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATCGATACTCTCCTTGTTaGTCTCGGTTGAACACAACT +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYRYSPC*SRLNTT
Trigger: AGTTGTGTTCAACCGAGACAAACAAGGAGAGTATCG...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642744.1
ENST00000645319.2
CDS TCA 90 bp TCAAATTGTAACCATAAATCTCCATTTCATCTTCTTGACCCTGATTaGTGGTCTTCCTTTCTTCCCTGTCCATACCTACAGTGGATTAAA +
Preference number: 5 (lower is better)
Translates to: SNCNHKSPFHLLDPD*WSSFLPCPYLQWIK
Trigger: TTTAATCCACTGTAGGTATGGACAGGGAAGAAAGGAAGACCATCAATCAGGGTCAAGAAGATGAAATGGAGATTTATGGTTACAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000446356.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTACAAGCATCTGATTTaGGATGCCACACTTCATACC +
Preference number: 5 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSYKHLI*DATLHT
Trigger: GGTATGAAGTGTGGCATCCAAAATCAGATGCTTGTA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCATTTTTGTAGCAAGGTaGCCTGAAGGGTTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGIFVAR*PEGFSF
Trigger: AAAGGAAAACCCTTCAGGCAACCTTGCTACAAAAAT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAACATGTACTTTGCCTTaGGTGTCTTCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: FLPEISASNMLICNDPIQTCTLP*VSSFYS
Trigger: GCTGTAGAAAGAAGACACCAAAGGCAAAGTACATGT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTATTGCTTTACAGCAGTaGGTGCTAGAAGATACAAAA +
Preference number: 5 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLIALQQ*VLEDTK
Trigger: TTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAAT...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAATCTAACTTCCTACAAATGCTTTTCCAGCCACCTAAACACCTCATTCCTTGTATTCAAGCATTATTaGCAGCATTGCTTTACAGCA +
Preference number: 5 (lower is better)
Translates to: SNLTSYKCFSSHLNTSFLVFKHY*QHCFTA
Trigger: TGCTGTAAAGCAATGCTGCAAATAATGCTTGAATAC...AAGGAATGAGGTGTTTAGGTGGCTGGAAAAGCATTTGTAGGAAGTTAGATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTGTTGGCTTAGCCACTaGTATTCAAGCATTATTTGC +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGCWLSH*YSSIIC
Trigger: GCAAATAATGCTTGAATACAAGTGGCTAAGCCAACA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTATGCCATGTCAGTTTaGACTCCAATTTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGYAMSV*TPIFCV
Trigger: CACACAGAAAATTGGAGTCAAAACTGACATGGCATA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCCCCATAAAATCCATGTaGTTCTCAATTGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGPIKSM*FSIASL
Trigger: CAGAGATGCAATTGAGAACAACATGGATTTTATGGG...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAATGACGGTGCGAATGTaGGCTTTATGCAAATCTTCA +
Preference number: 5 (lower is better)
Translates to: FLPEISASNMLICNDPIQMTVRM*ALCKSS
Trigger: TGAAGATTTGCATAAAGCCAACATTCGCACCGTCAT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCTTATTTACCATGCCTTaGAAACTGTGCAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGLFTMP*KLCRTF
Trigger: GAAAGTCCTGCACAGTTTCAAAGGCATGGTAAATAA...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS CCA 90 bp CCTAGGTTACTTAAGATAGAATACAGCAGAGTAACACTGAAGTACTaGATAATGCTGTACAATGCCATGAATTTAAACACACAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: PRLLKIEYSRVTLKY*IMLYNAMNLNTQKE
Trigger: TTCCTTCTGTGTGTTTAAATTCATGGCATTGTACAGCATTATCCAGTACTTCAGTGTTACTCTGCTGTATTCTATCTTAAGTAACCTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CCA 90 bp GTAAATACCACTACCAAAATGATTGCCAGATCAATGAAGAGAAACTaGAAGTCTCCTAGGTTACTTAAGATAGAATACAGCAGAGTAACA +
Preference number: 5 (lower is better)
Translates to: VNTTTKMIARSMKRN*KSPRLLKIEYSRVT
Trigger: TGTTACTCTGCTGTATTCTATCTTAAGTAACCTAGGAGACTTCCAGTTTCTCTTCATTGATCTGGCAATCATTTTGGTAGTGGTATTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAAAAAACCCGCTTCCTGTaGTATTACAAGCATCTGATT +
Preference number: 5 (lower is better)
Translates to: FLPEISASNMLICNDPIQKTRFL*YYKHLI
Trigger: AATCAGATGCTTGTAATACAACAGGAAGCGGGTTTT...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATAAAACCCGCTTCCTGTaGTATTACAAGCATCTGATT +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYKTRFL*YYKHLI
Trigger: AATCAGATGCTTGTAATACAACAGGAAGCGGGTTTT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTCAAGTTCGGTTTCATaGTCTACGTGTGAAGAATTC +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYSSSVS*STCEEF
Trigger: GAATTCTTCACACGTAGACAATGAAACCGAACTTGA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATATTTTTGTAGCAAGGTaGCCTGAAGGGTTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYIFVAR*PEGFSF
Trigger: AAAGGAAAACCCTTCAGGCAACCTTGCTACAAAAAT...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATGGAGATTACCTGAGTaGTTCTATAAGCAACACCAT +
Preference number: 5 (lower is better)
Translates to: FLPEISASNMLICNDPIQWRLPE*FYKQHH
Trigger: ATGGTGTTGCTTATAGAACAACTCAGGTAATCTCCA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TCAAAATTACTATGTAATGGTAACCTACGAGAGAAGACTCAGTCTATCTATGGCATTGCTTTACAGCAGTaGGTGCTAGAAGATACAAAA +
Preference number: 5 (lower is better)
Translates to: SKLLCNGNLREKTQSIYGIALQQ*VLEDTK
Trigger: TTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAAT...GCCATAGATAGACTGAGTCTTCTCTCGTAGGTTACCATTACATAGTAATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTGTTGGCTTAGCCACTaGTATTCAAGCATTATTTGC +
Preference number: 5 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSCWLSH*YSSIIC
Trigger: GCAAATAATGCTTGAATACAAGTGGCTAAGCCAACA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAATATGCCATGTCAGTTTaGACTCCAATTTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: FLPEISASNMLICNDPIQYAMSV*TPIFCV
Trigger: CACACAGAAAATTGGAGTCAAAACTGACATGGCATA...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp TTTCTCCCAGAAATTTCCGCATCAAATATGCTCATTTGTAACGATCCAATTCAACCCATAAAATCCATGTaGTTCTCAATTGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: FLPEISASNMLICNDPIQPIKSM*FSIASL
Trigger: CAGAGATGCAATTGAGAACAACATGGATTTTATGGG...TTGAATTGGATCGTTACAAATGAGCATATTTGATGCGGAAATTTCTGGGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCCCCATAAAATCCATGTaGTTCTCAATTGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSPIKSM*FSIASL
Trigger: CAGAGATGCAATTGAGAACAACATGGATTTTATGGG...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATTTATTTACCATGCCTTaGAAACTGTGCAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYLFTMP*KLCRTF
Trigger: GAAAGTCCTGCACAGTTTCAAAGGCATGGTAAATAA...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp AAGTATTTATTCTGTTGTTGGCTTAGCCACTTGTATTCAAGCATTATTTGCAGCTTATTTACCATGCCTTaGAAACTGTGCAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: KYLFCCWLSHLYSSIICSLFTMP*KLCRTF
Trigger: GAAAGTCCTGCACAGTTTCAAAGGCATGGTAAATAA...GCTGCAAATAATGCTTGAATACAAGTGGCTAAGCCAACAACAGAATAAATACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATGACCATCATAGGGAATaGGCATATGTTTATACAGAA +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYDHHRE*AYVYTE
Trigger: TTCTGTATAAACATATGCCAATTCCCTATGATGGTC...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS-3UTR CAA 90 bp CATTATTTGCAGCATTGCTTTACAGCAGTTGGTGCTAGAAGATACAAAACATATGTATTCAAGCATTATTaGCAGCATTGCTTTACAGCA +
Preference number: 5 (lower is better)
Translates to: HYLQHCFTAVGARRYKTYVFKHY*QHCFTA
Trigger: TGCTGTAAAGCAATGCTGCAAATAATGCTTGAATAC...ATATGTTTTGTATCTTCTAGCACCAACTGCTGTAAAGCAATGCTGCAAATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS GCA 72 bp TGTCAGCTAGTTAGTCTCCTGCTAGGACACCAGCTGTaGACCGGTGATGCCAAGTACCCTCTGACGAAGCAG +
Preference number: 6 (lower is better)
Translates to: CQLVSLLLGHQL*TGDAKYPLTKQ
Trigger: CTGCTTCGTCAGAGGGTACTTGGCATCACCGGTGCACAGCTGGTGTCCTAGCAGGAGACTAACTAGCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS GCA 72 bp TCAAAGCGGCTTCTGCCTCCAAGGCCCATGATGCTGTaGTGCCTCCTTTACCTCTTCAACATCTTGCCAGAC +
Preference number: 6 (lower is better)
Translates to: SKRLLPPRPMML*CLLYLFNILPD
Trigger: GTCTGGCAAGATGTTGAAGAGGTAAAGGAGGCAGCACAGCATCATGGGCCTTGGAGGCAGAAGCCGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS CCA 72 bp CGACAGGAACTGTTTCAGGTTTACAGAGACCGGCAATaGCCTCGGGCGCTCCTTTCATGTAGGCGTCCATTT +
Preference number: 6 (lower is better)
Translates to: RQELFQVYRDRQ*PRALLSCRRPF
Trigger: AAATGGACGCCTACATGAAAGGAGCGCCCGAGGCCATTGCCGGTCTCTGTAAACCTGAAACAGTTCCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CCA 72 bp TCCTTTGGGCTCCTGGCACCAGAAAGAATTGCTCACTaGAAGGATCATAGGTGGCACTCATGTCTCACTGCC +
Preference number: 6 (lower is better)
Translates to: SFGLLAPERIAH*KDHRWHSCLTA
Trigger: GGCAGTGAGACATGAGTGCCACCTATGATCCTTCCAGTGAGCAATTCTTTCTGGTGCCAGGAGCCCAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS CAA 90 bp AGCTGGTTGACTGAGTTTCCTTTGGGCTCCTGGCACCAGAAAGAATaGCTCACTGGAAGGATCATAGGTGGCACTCATGTCTCACTGCCC +
Preference number: 6 (lower is better)
Translates to: SWLTEFPLGSWHQKE*LTGRIIGGTHVSLP
Trigger: GGGCAGTGAGACATGAGTGCCACCTATGATCCTTCCAGTGAGCAATTCTTTCTGGTGCCAGGAGCCCAAAGGAAACTCAGTCAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS CAA 90 bp GACTCCTGCGGTGGCTGTGTGGTGCTGAACCGATACTCTCCTTGTTaGTCTCGGTTGAACACAACTTTCCAAAGGACCATGTCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: DSCGGCVVLNRYSPC*SRLNTTFQRTMSRK
Trigger: CTTCCTTGACATGGTCCTTTGGAAAGTTGTGTTCAACCGAGACAAACAAGGAGAGTATCGGTTCAGCACCACACAGCCACCGCAGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461660.1
ENST00000642744.1
ENST00000645319.2
ENST00000645621.1
CDS TCA 72 bp ATTATCTGTTTAAGCACCCAGACTTCCACCTCCTCATaGGCCAGGACCTTCCTCAGCCACATCTGGATCCTC +
Preference number: 6 (lower is better)
Translates to: IICLSTQTSTSS*ARTFLSHIWIL
Trigger: GAGGATCCAGATGTGGCTGAGGAAGGTCCTGGCTCATGAGGAGGTGGAAGTCTGGGTGCTTAAACAGATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS GCA 72 bp GAGATGCCACTGAAGCTTCGAGCTCCGATAAGGAAATaGCTCCGTGTGCCCTCTTCAAAGCACCACAATCAT +
Preference number: 6 (lower is better)
Translates to: EMPLKLRAPIRK*LRVPSSKHHNH
Trigger: ATGATTGTGGTGCTTTGAAGAGGGCACACGGAGGCATTTCCTTATCGGAGCTCGAAGCTTCAGTGGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS GCA 72 bp AGTAGTCCTCAGCAGCACTACTTCACAGTCTTTAATTaGAGCTCTGACACAGGTCGCTTTCACCCGCCACTC +
Preference number: 6 (lower is better)
Translates to: SSPQQHYFTVFN*SSDTGRFHPPL
Trigger: GAGTGGCGGGTGAAAGCGACCTGTGTCAGAGCTGCAATTAAAGACTGTGAAGTAGTGCTGCTGAGGACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS CAA 72 bp CTGCGGTGGCTGTGTGGTGCTGAACCGATACTCTCCTaGTTTGTCTCGGTTGAACACAACTTTCCAAAGGAC +
Preference number: 6 (lower is better)
Translates to: LRWLCGAEPILS*FVSVEHNFPKD
Trigger: GTCCTTTGGAAAGTTGTGTTCAACCGAGACAAACAAGGAGAGTATCGGTTCAGCACCACACAGCCACCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461660.1
ENST00000642744.1
ENST00000645319.2
ENST00000645621.1
CDS GCA 72 bp CTATCCCCCAGCACCCTGGCAACCACACTCATACGTTaGAAAGCAGAAGAAAATGGGAACTGGCGAACAATT +
Preference number: 6 (lower is better)
Translates to: LSPSTLATTLIR*KAEENGNWRTI
Trigger: AATTGTTCGCCAGTTCCCATTTTCTTCTGCTTTGCAACGTATGAGTGTGGTTGCCAGGGTGCTGGGGGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CCA 72 bp GCACCAGAAAGAATTGCTCACTGGAAGGATCATAGGTaGCACTCATGTCTCACTGCCCCACTCAGGTATGTA +
Preference number: 6 (lower is better)
Translates to: APERIAHWKDHR*HSCLTAPLRYV
Trigger: TACATACCTGAGTGGGGCAGTGAGACATGAGTGCCACCTATGATCCTTCCAGTGAGCAATTCTTTCTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS CCA 72 bp TCATGTAGGCGTCCATTTTCCTATCCCCCAGCACCCTaGCAACCACACTCATACGTTGCAAAGCAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: SCRRPFSYPPAP*QPHSYVAKQKK
Trigger: TTTCTTCTGCTTTGCAACGTATGAGTGTGGTTGCCAGGGTGCTGGGGGATAGGAAAATGGACGCCTACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 72 bp ACTGAGTTTCCTTTGGGCTCCTGGCACCAGAAAGAATaGCTCACTGGAAGGATCATAGGTGGCACTCATGTC +
Preference number: 6 (lower is better)
Translates to: TEFPLGSWHQKE*LTGRIIGGTHV
Trigger: GACATGAGTGCCACCTATGATCCTTCCAGTGAGCAATTCTTTCTGGTGCCAGGAGCCCAAAGGAAACTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS CAA 72 bp CTAGAACAAACTCGGAACAAGCCCATCTACAGCTGGTaGACTGAGTTTCCTTTGGGCTCCTGGCACCAGAAA +
Preference number: 6 (lower is better)
Translates to: LEQTRNKPIYSW*TEFPLGSWHQK
Trigger: TTTCTGGTGCCAGGAGCCCAAAGGAAACTCAGTCAACCAGCTGTAGATGGGCTTGTTCCGAGTTTGTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS CAA 72 bp TTCTTGGTTTCCTGCAGGGGTAGATTCAGGAAGCAGTaGTTTGGGAGGACGAACCACTGTGGGCATAATTCG +
Preference number: 6 (lower is better)
Translates to: FLVSCRGRFRKQ*FGRTNHCGHNS
Trigger: CGAATTATGCCCACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTGAATCTACCCCTGCAGGAAACCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 72 bp GGTGGCTGTGTGGTGCTGAACCGATACTCTCCTTGTTaGTCTCGGTTGAACACAACTTTCCAAAGGACCATG +
Preference number: 6 (lower is better)
Translates to: GGCVVLNRYSPC*SRLNTTFQRTM
Trigger: CATGGTCCTTTGGAAAGTTGTGTTCAACCGAGACAAACAAGGAGAGTATCGGTTCAGCACCACACAGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461660.1
ENST00000642744.1
ENST00000645319.2
ENST00000645621.1
CDS CAA 90 bp CAAACTCGGAACAAGCCCATCTACAGCTGGTTGACTGAGTTTCCTTaGGGCTCCTGGCACCAGAAAGAATTGCTCACTGGAAGGATCATA +
Preference number: 6 (lower is better)
Translates to: QTRNKPIYSWLTEFP*GSWHQKELLTGRII
Trigger: TATGATCCTTCCAGTGAGCAATTCTTTCTGGTGCCAGGAGCCCAAAGGAAACTCAGTCAACCAGCTGTAGATGGGCTTGTTCCGAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS CAA 90 bp GGTGGCTGTGTGGTGCTGAACCGATACTCTCCTTGTTTGTCTCGGTaGAACACAACTTTCCAAAGGACCATGTCAAGGAAGAAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: GGCVVLNRYSPCLSR*NTTFQRTMSRKKFS
Trigger: GGAGAACTTCTTCCTTGACATGGTCCTTTGGAAAGTTGTGTTCAACCGAGACAAACAAGGAGAGTATCGGTTCAGCACCACACAGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642744.1
ENST00000645319.2
ENST00000645621.1
CDS TCA 72 bp ACAAACTCGGAACAAGCCCATCTACAGCTGGTTGACTaGGTTTCCTTTGGGCTCCTGGCACCAGAAAGAATT +
Preference number: 6 (lower is better)
Translates to: TNSEQAHLQLVD*VSFGLLAPERI
Trigger: AATTCTTTCTGGTGCCAGGAGCCCAAAGGAAACTCAGTCAACCAGCTGTAGATGGGCTTGTTCCGAGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS GCA 72 bp CAGTCTTCTCTGAGCATACACAATACCAGCAGTCATTaGAGCAGGAAGTGCAGGGGGCACAGTAATTGTGAT +
Preference number: 6 (lower is better)
Translates to: QSSLSIHNTSSH*SRKCRGHSNCD
Trigger: ATCACAATTACTGTGCCCCCTGCACTTCCTGCTGCAATGACTGCTGGTATTGTGTATGCTCAGAGAAGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS GCA 72 bp AGCTGGAAGTTCAAACAGCTCCATTTCTTGGTTTCCTaGAGGGGTAGATTCAGGAAGCAGTTGTTTGGGAGG +
Preference number: 6 (lower is better)
Translates to: SWKFKQLHFLVS*RGRFRKQLFGR
Trigger: CCTCCCAAACAACTGCTTCCTGAATCTACCCCTGCAGGAAACCAAGAAATGGAGCTGTTTGAACTTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CCA 72 bp GGCAGATCACTTGAGGCCAGGAGTACCAAACCAGCCTaGCCAACAAGGTTGACACTGTTTCTACTAAAAACA +
Preference number: 6 (lower is better)
Translates to: GRSLEARSTKPA*PTRLTLFLLKT
Trigger: TGTTTTTAGTAGAAACAGTGTCAACCTTGTTGGCCAGGCTGGTTTGGTACTCCTGGCCTCAAGTGATCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS CAA 90 bp CAGCTCCATTTCTTGGTTTCCTGCAGGGGTAGATTCAGGAAGCAGTaGTTTGGGAGGACGAACCACTGTGGGCATAATTCGATTATGAAG +
Preference number: 6 (lower is better)
Translates to: QLHFLVSCRGRFRKQ*FGRTNHCGHNSIMK
Trigger: CTTCATAATCGAATTATGCCCACAGTGGTTCGTCCTCCCAAACAACTGCTTCCTGAATCTACCCCTGCAGGAAACCAAGAAATGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 90 bp CCAAGGCCCATGATGCTGTGCTGCCTCCTTTACCTCTTCAACATCTaGCCAGACAAGTTACACGTCCAAAATATTACCATTCTTGCAAGC +
Preference number: 6 (lower is better)
Translates to: PRPMMLCCLLYLFNI*PDKLHVQNITILAS
Trigger: GCTTGCAAGAATGGTAATATTTTGGACGTGTAACTTGTCTGGCAAGATGTTGAAGAGGTAAAGGAGGCAGCACAGCATCATGGGCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS TCA 72 bp TCAACATTTTGCAATGCTTCTATCAACTGTGTCTTCTaGTCAGGTGCCATACGGGCAAACACGGTGCCATGC +
Preference number: 6 (lower is better)
Translates to: STFCNASINCVF*SGAIRANTVPC
Trigger: GCATGGCACCGTGTTTGCCCGTATGGCACCTGATCAGAAGACACAGTTGATAGAAGCATTGCAAAATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000484023.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS TCA 72 bp CAGTCACTTGTGACCTACTTTCAGAGCTGGCAGTTCTaGCTTCTAGAACAAACTCGGAACAAGCCCATCTAC +
Preference number: 6 (lower is better)
Translates to: QSLVTYFQSWQF*LLEQTRNKPIY
Trigger: GTAGATGGGCTTGTTCCGAGTTTGTTCTAGAAGTCAGAACTGCCAGCTCTGAAAGTAGGTCACAAGTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS CAA 72 bp GTGGTGCTGAACCGATACTCTCCTTGTTTGTCTCGGTaGAACACAACTTTCCAAAGGACCATGTCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: VVLNRYSPCLSR*NTTFQRTMSRK
Trigger: CTTCCTTGACATGGTCCTTTGGAAAGTTGTGTTCAACCGAGACAAACAAGGAGAGTATCGGTTCAGCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461660.1
ENST00000642744.1
ENST00000645319.2
ENST00000645621.1
CDS CAA 90 bp GTGGCACTCATGTCTCACTGCCCCACTCAGGTATGTAGATTTTCATaGCCCTATAAACCACAGTCAACATCTCAAGATCTCCAGAAGGAT +
Preference number: 6 (lower is better)
Translates to: VALMSHCPTQVCRFS*PYKPQSTSQDLQKD
Trigger: ATCCTTCTGGAGATCTTGAGATGTTGACTGTGGTTTATAGGGCAATGAAAATCTACATACCTGAGTGGGGCAGTGAGACATGAGTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS CAA 90 bp ACAGCAGTCAACATACTGTCACCTGTGACCATGACGGTGCGAATGTaGGCTTTATGCAAATCTTCAAGTACTGCAGGGGTTTCTTGCTTT +
Preference number: 6 (lower is better)
Translates to: TAVNILSPVTMTVRM*ALCKSSSTAGVSCF
Trigger: AAAGCAAGAAACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCGCACCGTCATGGTCACAGGTGACAGTATGTTGACTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS GCA 72 bp TCACCTGTGACCATGACGGTGCGAATGTTGGCTTTATaGAAATCTTCAAGTACTGCAGGGGTTTCTTGCTTT +
Preference number: 6 (lower is better)
Translates to: SPVTMTVRMLAL*KSSSTAGVSCF
Trigger: AAAGCAAGAAACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCGCACCGTCATGGTCACAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 72 bp CTCATAAGTAGCTGGAAGTTCAAACAGCTCCATTTCTaGGTTTCCTGCAGGGGTAGATTCAGGAAGCAGTTG +
Preference number: 6 (lower is better)
Translates to: LISSWKFKQLHF*VSCRGRFRKQL
Trigger: CAACTGCTTCCTGAATCTACCCCTGCAGGAAACCAAGAAATGGAGCTGTTTGAACTTCCAGCTACTTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 72 bp AACATACTGTCACCTGTGACCATGACGGTGCGAATGTaGGCTTTATGCAAATCTTCAAGTACTGCAGGGGTT +
Preference number: 6 (lower is better)
Translates to: NILSPVTMTVRM*ALCKSSSTAGV
Trigger: AACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCGCACCGTCATGGTCACAGGTGACAGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 90 bp AATTCCTATCTCATAAGTAGCTGGAAGTTCAAACAGCTCCATTTCTaGGTTTCCTGCAGGGGTAGATTCAGGAAGCAGTTGTTTGGGAGG +
Preference number: 6 (lower is better)
Translates to: NSYLISSWKFKQLHF*VSCRGRFRKQLFGR
Trigger: CCTCCCAAACAACTGCTTCCTGAATCTACCCCTGCAGGAAACCAAGAAATGGAGCTGTTTGAACTTCCAGCTACTTATGAGATAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS TCA 72 bp TTCTCCTTAACTAAAGCTTTAGCTTCTGTGGTTGTCTaGGGTTTTGGTGGCCATTCTGGATCAACCAAGAGC +
Preference number: 6 (lower is better)
Translates to: FSLTKALASVVV*GFGGHSGSTKS
Trigger: GCTCTTGGTTGATCCAGAATGGCCACCAAAACCTCAGACAACCACAGAAGCTAAAGCTTTAGTTAAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000461660.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS TCA 72 bp TTGGGAGGACGAACCACTGTGGGCATAATTCGATTATaGAGTGCTGTTTCTTCTTCAGTTGCTTCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: LGGRTTVGIIRL*SAVSSSVASSR
Trigger: TCTGGAAGAAGCAACTGAAGAAGAAACAGCACTTCATAATCGAATTATGCCCACAGTGGTTCGTCCTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS GCA 72 bp CCGCTTCCTGTTGTATTACAAGCATCTGATTTTGGATaGCACACTTCATACCAAGGTTGCTGTTTGACCCAA +
Preference number: 6 (lower is better)
Translates to: PLPVVLQASDFG*HTSYQGCCLTQ
Trigger: TTGGGTCAAACAGCAACCTTGGTATGAAGTGTGGCATCCAAAATCAGATGCTTGTAATACAACAGGAAGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS GCA 72 bp AGCATACACAATACCAGCAGTCATTGCAGCAGGAAGTaGAGGGGGCACAGTAATTGTGATAATATCAAGAGA +
Preference number: 6 (lower is better)
Translates to: SIHNTSSHCSRK*RGHSNCDNIKR
Trigger: TCTCTTGATATTATCACAATTACTGTGCCCCCTGCACTTCCTGCTGCAATGACTGCTGGTATTGTGTATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS GCA 72 bp AAGTGGGTAAGGAAGATTCAAGTTGAATGGTATGTCTaGCCTGGCATCCCCATTATATTCAGCAACAGCAGA +
Preference number: 6 (lower is better)
Translates to: KWVRKIQVEWYV*PGIPIIFSNSR
Trigger: TCTGCTGTTGCTGAATATAATGGGGATGCCAGGGCAGACATACCATTCAACTTGAATCTTCCTTACCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS CCA 72 bp TGGGAACTGGCGAACAATTCCTATCTCATAAGTAGCTaGAAGTTCAAACAGCTCCATTTCTTGGTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: WELANNSYLISS*KFKQLHFLVSC
Trigger: GCAGGAAACCAAGAAATGGAGCTGTTTGAACTTCCAGCTACTTATGAGATAGGAATTGTTCGCCAGTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 72 bp AAGTATGTGCTCTGTTATCTCCTGGAGTATGAGACATaGTTCGGGGCACCCAAAAGATTCACATACACAACG +
Preference number: 6 (lower is better)
Translates to: KYVLCYLLEYET*FGAPKRFTYTT
Trigger: CGTTGTGTATGTGAATCTTTTGGGTGCCCCGAACAATGTCTCATACTCCAGGAGATAACAGAGCACATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497567.1
CDS TCA 72 bp AAACATGTACTTGCTGAGAATCTACTACAGTCTCCATaGCTGGGCTGGCAGAGTAACGATAATGTATGGTTC +
Preference number: 6 (lower is better)
Translates to: KHVLAENLLQSP*LGWQSNDNVWF
Trigger: GAACCATACATTATCGTTACTCTGCCAGCCCAGTCATGGAGACTGTAGTAGATTCTCAGCAAGTACATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484023.1
CDS CAA 72 bp ATGTCTCACTGCCCCACTCAGGTATGTAGATTTTCATaGCCCTATAAACCACAGTCAACATCTCAAGATCTC +
Preference number: 6 (lower is better)
Translates to: MSHCPTQVCRFS*PYKPQSTSQDL
Trigger: GAGATCTTGAGATGTTGACTGTGGTTTATAGGGCAATGAAAATCTACATACCTGAGTGGGGCAGTGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439040.5
CDS TCA 72 bp AACCATAAATCTCCATTTCATCTTCTTGACCCTGATTaGTGGTCTTCCTTTCTTCCCTGTCCATACCTACAG +
Preference number: 6 (lower is better)
Translates to: NHKSPFHLLDPD*WSSFLPCPYLQ
Trigger: CTGTAGGTATGGACAGGGAAGAAAGGAAGACCATCAATCAGGGTCAAGAAGATGAAATGGAGATTTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000446356.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS TCA 72 bp CGGAAGCCCTGTTTAGTGAAGTCTTCCAAAACGTTTTaGAAATCGACAGGAACTGTTTCAGGTTTACAGAGA +
Preference number: 6 (lower is better)
Translates to: RKPCLVKSSKTF*KSTGTVSGLQR
Trigger: TCTCTGTAAACCTGAAACAGTTCCTGTCGATTTTCAAAACGTTTTGGAAGACTTCACTAAACAGGGCTTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS TCA 72 bp TTTGGAGGTAATGCTTCAGCAATAATCACTTTATCCTaGGGTAGAATCATTCCACAATCTCTGGCCACAGAG +
Preference number: 6 (lower is better)
Translates to: FGGNASAIITLS*GRIIPQSLATE
Trigger: CTCTGTGGCCAGAGATTGTGGAATGATTCTACCTCAGGATAAAGTGATTATTGCTGAAGCATTACCTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439040.5
ENST00000484023.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS TCA 72 bp TGGAATAAAGTATGTGCTCTGTTATCTCCTGGAGTATaGGACATTGTTCGGGGCACCCAAAAGATTCACATA +
Preference number: 6 (lower is better)
Translates to: WNKVCALLSPGV*DIVRGTQKIHI
Trigger: TATGTGAATCTTTTGGGTGCCCCGAACAATGTCTCATACTCCAGGAGATAACAGAGCACATACTTTATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497567.1
CDS CCA 72 bp GAAACCCACCAGAGCAAATCACTCCTAAAGAAACTATaGCAAGCTTCCAGCGACTCAAATTGTAACCATAAA +
Preference number: 6 (lower is better)
Translates to: ETHQSKSLLKKL*QASSDSNCNHK
Trigger: TTTATGGTTACAATTTGAGTCGCTGGAAGCTTGCCATAGTTTCTTTAGGAGTGATTTGCTCTGGTGGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000446356.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS CCA 72 bp AAGAACAATGATGAGCATAGTTACACGCCACTGATATaGTACACACACTATCTGAAGAACCTGGTCAACAGA +
Preference number: 6 (lower is better)
Translates to: KNNDEHSYTPLI*YTHYLKNLVNR
Trigger: TCTGTTGACCAGGTTCTTCAGATAGTGTGTGTACCATATCAGTGGCGTGTAACTATGCTCATCATTGTTCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 72 bp TGTCTACGTGTGAAGAATTCCAAAACCCGCTTCCTGTaGTATTACAAGCATCTGATTTTGGATGCCACACTT +
Preference number: 6 (lower is better)
Translates to: CLRVKNSKTRFL*YYKHLILDATL
Trigger: AAGTGTGGCATCCAAAATCAGATGCTTGTAATACAACAGGAAGCGGGTTTTGGAATTCTTCACACGTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 72 bp TCCCCTTTGTCAGTCCTGCACTATGCTTTTCATAAATaGACGTACAAGAAACACCTTCATCCAGTCCCTTTA +
Preference number: 6 (lower is better)
Translates to: SPLSVLHYAFHK*TYKKHLHPVPL
Trigger: TAAAGGGACTGGATGAAGGTGTTTCTTGTACGTCAATTTATGAAAAGCATAGTGCAGGACTGACAAAGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS CAA 90 bp AGGCATGCATCCCCTTTGTCAGTCCTGCACTATGCTTTTCATAAATaGACGTACAAGAAACACCTTCATCCAGTCCCTTTAAGAAATCAA +
Preference number: 6 (lower is better)
Translates to: RHASPLSVLHYAFHK*TYKKHLHPVPLRNQ
Trigger: TTGATTTCTTAAAGGGACTGGATGAAGGTGTTTCTTGTACGTCAATTTATGAAAAGCATAGTGCAGGACTGACAAAGGGGATGCATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439040.5
ENST00000645319.2
ENST00000645538.1
CDS CAA 90 bp ATAAGTTGGCTGACTTCTCCTTATCATAGCATTTGTCACACTGTATaGTTACTGTTACTACTGTTATCTCTACACCGAATCCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: ISWLTSPYHSICHTV*LLLLLLSLHRIPRA
Trigger: GGCTCTGGGGATTCGGTGTAGAGATAACAGTAGTAACAGTAACAATACAGTGTGACAAATGCTATGATAAGGAGAAGTCAGCCAACTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS TCA 72 bp TCTTCTGGTGAAAGAAATCGTGCATTTTCCACTCGTTaGATCCCCCAAAGATCTAAACCATCTTCAGTTAGA +
Preference number: 6 (lower is better)
Translates to: SSGERNRAFSTR*IPQRSKPSSVR
Trigger: TCTAACTGAAGATGGTTTAGATCTTTGGGGGATTCAACGAGTGGAAAATGCACGATTTCTTTCACCAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS TCA 72 bp TTAATCAAAGAAGTCATCCCTGATACCTACAGTAAATaGGCTCCCCTAATACATAAGTTGGCTGACTTCTCC +
Preference number: 6 (lower is better)
Translates to: LIKEVIPDTYSK*APLIHKLADFS
Trigger: GGAGAAGTCAGCCAACTTATGTATTAGGGGAGCTCATTTACTGTAGGTATCAGGGATGACTTCTTTGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS CAA 72 bp CAGCCTCCCCTTATCAACTTCTCACCTACCTCTTATTaGGCTAATTCAAATAGTCATCACTTACAAGCACTT +
Preference number: 6 (lower is better)
Translates to: QPPLINFSPTSY*ANSNSHHLQAL
Trigger: AAGTGCTTGTAAGTGATGACTATTTGAATTAGCCAAATAAGAGGTAGGTGAGAAGTTGATAAGGGGAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS CAA 90 bp TCCTTCTCTCAGCCTCCCCTTATCAACTTCTCACCTACCTCTTATTaGGCTAATTCAAATAGTCATCACTTACAAGCACTTAATCAAAGA +
Preference number: 6 (lower is better)
Translates to: SFSQPPLINFSPTSY*ANSNSHHLQALNQR
Trigger: TCTTTGATTAAGTGCTTGTAAGTGATGACTATTTGAATTAGCCAAATAAGAGGTAGGTGAGAAGTTGATAAGGGGAGGCTGAGAGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS TCA 72 bp TCACCAGAGAGCACTCCTTCAATTTTTGTAAGTGAATaGCAAGTAGCCATACAAGCAACAAACTGGGATTTT +
Preference number: 6 (lower is better)
Translates to: SPESTPSIFVSE*QVAIQATNWDF
Trigger: AAAATCCCAGTTTGTTGCTTGTATGGCTACTTGTCATTCACTTACAAAAATTGAAGGAGTGCTCTCTGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS TCA 72 bp TCTGCTAATATTCTGTACTTTATGCCATGTCAGTTTTaGCTCCAATTTTCTGTGTGCAAGAGCAATCACACG +
Preference number: 6 (lower is better)
Translates to: SANILYFMPCQF*LQFSVCKSNHT
Trigger: CGTGTGATTGCTCTTGCACACAGAAAATTGGAGTCAAAACTGACATGGCATAAAGTACAGAATATTAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CAA 72 bp GAAACAGGTCAAACAAACTCCGATTTCTATAATCCCTaGGAAACAGAAGGAAGCACTAGAAAACTTAGCATC +
Preference number: 6 (lower is better)
Translates to: ETGQTNSDFYNP*ETEGSTRKLSI
Trigger: GATGCTAAGTTTTCTAGTGCTTCCTTCTGTTTCCAAGGGATTATAGAAATCGGAGTTTGTTTGACCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS CAA 90 bp GATGCCTGTGAAACAGGTCAAACAAACTCCGATTTCTATAATCCCTaGGAAACAGAAGGAAGCACTAGAAAACTTAGCATCTTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: DACETGQTNSDFYNP*ETEGSTRKLSIFSF
Trigger: AAAAGAAAAGATGCTAAGTTTTCTAGTGCTTCCTTCTGTTTCCAAGGGATTATAGAAATCGGAGTTTGTTTGACCTGTTTCACAGGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS TCA 72 bp ATTATGTTCATCAAGTTCGGTTTCATTGTCTACGTGTaGAGAATTCCAAAACCCGCTTCCTGTTGTATTACA +
Preference number: 6 (lower is better)
Translates to: IMFIKFGFIVYV*RIPKPASCCIT
Trigger: TGTAATACAACAGGAAGCGGGTTTTGGAATTCTTCACACGTAGACAATGAAACCGAACTTGATGAACATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS TCA 72 bp TCATTTACTCTACAAACTGAAACTCTTACGGTACTATaGGTTGCCACCATGTCATGCAACATAACATATTGC +
Preference number: 6 (lower is better)
Translates to: SFTLQTETLTVL*VATMSCNITYC
Trigger: GCAATATGTTATGTTGCATGACATGGTGGCAACTCATAGTACCGTAAGAGTTTCAGTTTGTAGAGTAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000485194.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
CDS CCA 72 bp ACTACCAAAATGATTGCCAGATCAATGAAGAGAAACTaGAAGTCTCCTAGGTTACTTAAGATAGAATACAGC +
Preference number: 6 (lower is better)
Translates to: TTKMIARSMKRN*KSPRLLKIEYS
Trigger: GCTGTATTCTATCTTAAGTAACCTAGGAGACTTCCAGTTTCTCTTCATTGATCTGGCAATCATTTTGGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429136.6
ENST00000439040.5
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1
ENST00000645621.1
CDS CCA 72 bp GCTCAGAAGACAGTCACACTAGTTTATAAATGGAGATaGATGAGAAGAAACTTATTGTTTGTGATGTTAGCC +
Preference number: 6 (lower is better)
Translates to: AQKTVTLVYKWR*MRRNLLFVMLA
Trigger: GGCTAACATCACAAACAATAAGTTTCTTCTCATCCATCTCCATTTATAAACTAGTGTGACTGTCTTCTGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645621.1
CDS TCA 72 bp TGGTATCATTCCAGAAATATTTTACACTATGGTGGGTaGAATAACGAATCTGTTGTGATTCAGTCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: WYHSRNILHYGG*NNESVVIQSVN
Trigger: ATTCACAGACTGAATCACAACAGATTCGTTATTTCACCCACCATAGTGTAAAATATTTCTGGAATGATACCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439040.5
ENST00000492983.1
ENST00000642744.1
ENST00000645319.2
ENST00000645538.1