RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP12A (Homo sapiens)

Ensembl gene IDs: ENSG00000075673

Ensembl transcript IDs: ENST00000218548.10, ENST00000381946.5

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCATAAAGGGCTGGGGAGATGACCAGAGGTGGGATGGGGTGGCGTaGCCAGGGAAACTGTGGCAAGGGCCTTCAAGAAGGACGTCTCAG +
Preference number: 1 (lower is better)
Translates to: GIKGWGDDQRWDGVA*PGKLWQGPSRRTSQ
Trigger: CTGAGACGTCCTTCTTGAAGGCCCTTGCCACAGTTTCCCTGGCCACGCCACCCCATCCCACCTCTGGTCATCTCCCCAGCCCTTTATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
3UTR TCA 90 bp CGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATaGACAAGTGTGCCCCAACGTGCTGCTGAGAGACATAGGAAGGGA +
Preference number: 1 (lower is better)
Translates to: RCLHCRGIAQQTVRR*TSVPQRAAERHRKG
Trigger: TCCCTTCCTATGTCTCTCAGCAGCACGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
3UTR CCA 90 bp GTAAACCTGCCGCCACTTCCATCTCCTGCAGACCCTCGGGTGAGTTaGCCTTTTTCGAGCAAGGAGACCATGAAAACATACCTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: VNLPPLPSPADPRVS*PFSSKETMKTYLLR
Trigger: CCTGAGAAGGTATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTCTGCAGGAGATGGAAGTGGCGGCAGGTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381946.5
3UTR TCA 90 bp ATGGAAGTGTCACACATGAATACACCTAAGTTAAAACATGAAACATaGCTGACAAAACGTTATTGCTGGAGAGCACCTGGCAACTGTTTT +
Preference number: 1 (lower is better)
Translates to: MEVSHMNTPKLKHET*LTKRYCWRAPGNCF
Trigger: AAAACAGTTGCCAGGTGCTCTCCAGCAATAACGTTTTGTCAGTCATGTTTCATGTTTTAACTTAGGTGTATTCATGTGTGACACTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
3UTR CAA 90 bp TGTAAACCTGCCGCCACTTCCATCTCCTGCAGACCCTCGGGTGAGTaGGCCTTTTTCGAGCAAGGAGACCATGAAAACATACCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: CKPAATSISCRPSGE*AFFEQGDHENIPSQ
Trigger: CTGAGAAGGTATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTCTGCAGGAGATGGAAGTGGCGGCAGGTTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381946.5
3UTR-3UTR TCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGCAAACGGTCAGAAGATaGACAAGTGTGCCCCAACGT +
Preference number: 2 (lower is better)
Translates to: TSVSILHTAFCMKISSCLQTVRR*TSVPQR
Trigger: ACGTTGGGGCACACTTGTTCATCTTCTGACCGTTTG...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
3UTR-3UTR CCA 90 bp GAGCAAGGAGACCATGAAAACATACCTTCTCAGGGGATCTGCAGAAATCTTAGGGCCTTTAATAGGGTGTaGAAAGGAGTTCTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: EQGDHENIPSQGICRNLRAFNRV*KGVLSN
Trigger: ATTGCTCAGAACTCCTTTCCACACCCTATTAAAGGC...CCTAAGATTTCTGCAGATCCCCTGAGAAGGTATGTTTTCATGGTCTCCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
3UTR-3UTR TCA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTCAAACGGTCAGAAGATaGACAAGTGTGCCCCAACGT +
Preference number: 2 (lower is better)
Translates to: VSILHTAFCMKISSCLNFQTVRR*TSVPQR
Trigger: ACGTTGGGGCACACTTGTTCATCTTCTGACCGTTTG...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
3UTR-3UTR GCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAGAAGATGAACAAGTGTaGCCCAACGTGCTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: SFKVQNISEHPAYSFLHEEDEQV*PNVLLR
Trigger: TCTCAGCAGCACGTTGGGGCACACTTGTTCATCTTC...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
3UTR-3UTR GCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTGAAGATGAACAAGTGTaGCCCAACGTGCTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFEDEQV*PNVLLR
Trigger: TCTCAGCAGCACGTTGGGGCACACTTGTTCATCTTC...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
3UTR TCA 72 bp CACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATaGACAAGTGTGCCCCAACGTGCTGCTGAGAGACAT +
Preference number: 3 (lower is better)
Translates to: HCRGIAQQTVRR*TSVPQRAAERH
Trigger: ATGTCTCTCAGCAGCACGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
3UTR CCA 72 bp CCGCCACTTCCATCTCCTGCAGACCCTCGGGTGAGTTaGCCTTTTTCGAGCAAGGAGACCATGAAAACATAC +
Preference number: 3 (lower is better)
Translates to: PPLPSPADPRVS*PFSSKETMKTY
Trigger: GTATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTCTGCAGGAGATGGAAGTGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381946.5
3UTR-3UTR CAA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAAAGACCCTCGGGTGAGTaGGCCTTTTTCGAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKRPSGE*AFFEQG
Trigger: TCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTCT...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381946.5
3UTR TCA 72 bp TCACACATGAATACACCTAAGTTAAAACATGAAACATaGCTGACAAAACGTTATTGCTGGAGAGCACCTGGC +
Preference number: 3 (lower is better)
Translates to: SHMNTPKLKHET*LTKRYCWRAPG
Trigger: GCCAGGTGCTCTCCAGCAATAACGTTTTGTCAGTCATGTTTCATGTTTTAACTTAGGTGTATTCATGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGCTGAGGTGTTGGCGGTaGAGATACCGGCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTLRCWR*RYRRRR
Trigger: GCGCCGCCGCCGGTATCTCCACCGCCAACACCTCAG...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTTGGTGCATGCTGGGCTaGTGGCGCCGCGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCWCMLG*WRRGLR
Trigger: CCGCAGCCCGCGGCGCCACCAGCCCAGCATGCACCA...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGCTCCCCCGTGAGAGATaGGTTATCCACCCGACACCC +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTLPRER*VIHPTP
Trigger: GGGTGTCGGGTGGATAACTCATCTCTCACGGGGGAG...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGGGCACCAGCCTTAAATaGCGCCCGCCCCGCCCACGT +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMGTSLK*RPPRPR
Trigger: ACGTGGGCGGGGCGGGCGGCATTTAAGGCTGGTGCC...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGTCTGCTTGGGAGGGGTaGGGGAGTTGGGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMSAWEG*GSWAHP
Trigger: GGGATGGGCCCAACTCCCTCACCCCTCCCAAGCAGA...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGACACCCAGATCAGGATaGCGTGCGGCACAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTTPRSG*RAAQPQ
Trigger: TTGTGGCTGTGCCGCACGCCATCCTGATCTGGGTGT...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGCCCCCTTCATCACCATaGGGAAGCGCTTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMPPSSP*GSACRG
Trigger: CCCACGGCAAGCGCTTCCTCATGGTGATGAAGGGGG...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp GACCCTCGGGTGAGTTGGCCTTTTTCGAGCAAGGAGACCATGAAAACATACCTTCCCCCTTCATCACCATaGGGAAGCGCTTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: DPRVSWPFSSKETMKTYLPPSSP*GSACRG
Trigger: CCCACGGCAAGCGCTTCCTCATGGTGATGAAGGGGG...AAGGTATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGCTTGGCCATCCGTTTTaGTGTCAGCGACAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTLGHPF*CQRQGH
Trigger: GTGACCCTGTCGCTGACAGCAAAACGGATGGCCAAG...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGGGAAGGTCTTGGCAGTaGTCTTGTCCAGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTGRSWQ*SCPVGA
Trigger: AGCACCCACTGGACAAGAGCACTGCCAAGACCTTCC...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp GGACGTCTCAGAGTTAAACGAGTCAAAGCTGAGGTCATGCGTGCTGCTGTGATGCCGGCATTTGGTGACTaGATCTGGCACGGTGGACCG +
Preference number: 4 (lower is better)
Translates to: GRLRVKRVKAEVMRAAVMPAFGD*IWHGGP
Trigger: CGGTCCACCGTGCCAGATGCAGTCACCAAATGCCGG...CATCACAGCAGCACGCATGACCTCAGCTTTGACTCGTTTAACTCTGAGACGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGGGCTGCATCAGAACCTaGTATCCCCATGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTGCIRT*YPHGNP
Trigger: GGGATTGCCATGGGGATAGCAGGTTCTGATGCAGCC...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAACGGCGGAGCGCACGGTaGGGGGCCTCGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKRRSAR*GASCGC
Trigger: ACAGCCACACGAGGCCCCCCACCGTGCGCTCCGCCG...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp GGACGTCTCAGAGTTAAACGAGTCAAAGCTGAGGTCATGCGTGCTGCTGTGATGAGGAAGCGCTTGCCGTaGGGGTCATCCATCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GRLRVKRVKAEVMRAAVMRKRLP*GSSISW
Trigger: CCACGAGATGGATGACCCCCACGGCAAGCGCTTCCT...CATCACAGCAGCACGCATGACCTCAGCTTTGACTCGTTTAACTCTGAGACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACCTGCATCTGGCACGGTaGACCGAGGGGGATCGATCA +
Preference number: 4 (lower is better)
Translates to: LTMSALQGNSPANGQKMNLHLAR*TEGDRS
Trigger: TGATCGATCCCCCTCGGTCCACCGTGCCAGATGCAG...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGTACACAGCGAGCGGCTaGTTCACCAGCCTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTYTASG*FTSLSL
Trigger: TAAGGACAGGCTGGTGAACCAGCCGCTCGCTGTGTA...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAACCGATCGCCAGCCGCTaGACCGGGGAGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKPIASR*TGEVAP
Trigger: TGGTGCCACCTCCCCGGTGCAGCGGCTGGCGATCGG...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGTGTGGCTGTGGCAGTaGCAGTGGCTGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCVWLWQ*QWLRCW
Trigger: CCAACACCTCAGCCACTGCCACTGCCACAGCCACAC...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTCGGCGGAGCGCACGGTaGGGGGCCTCGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NISEHPAYSFLHENFLLSRRSAR*GASCGC
Trigger: ACAGCCACACGAGGCCCCCCACCGTGCGCTCCGCCG...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGATTTCTGGGGTTTTCTaGTGCATGCTGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTISGVF*CMLGWW
Trigger: CCACCAGCCCAGCATGCACCAGAAAACCCCAGAAAT...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGTTTGGTGACTGCATCTaGCACGGTGGACCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMFGDCI*HGGPRG
Trigger: CCCCCTCGGTCCACCGTGCCAGATGCAGTCACCAAA...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp GGACGTCTCAGAGTTAAACGAGTCAAAGCTGAGGTCATGCGTGCTGCTGTGATGACACCCAGATCAGGATaGCGTGCGGCACAGCCACAA +
Preference number: 4 (lower is better)
Translates to: GRLRVKRVKAEVMRAAVMTPRSG*RAAQPQ
Trigger: TTGTGGCTGTGCCGCACGCCATCCTGATCTGGGTGT...CATCACAGCAGCACGCATGACCTCAGCTTTGACTCGTTTAACTCTGAGACGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381946.5
3UTR CAA 72 bp GCCGCCACTTCCATCTCCTGCAGACCCTCGGGTGAGTaGGCCTTTTTCGAGCAAGGAGACCATGAAAACATA +
Preference number: 4 (lower is better)
Translates to: AATSISCRPSGE*AFFEQGDHENI
Trigger: TATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTCTGCAGGAGATGGAAGTGGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCAATGTGCAGGTATaGGTACACAGCGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCANVQV*VHSERL
Trigger: CAGCCGCTCGCTGTGTACTCATACCTGCACATTGGC...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp GGACGTCTCAGAGTTAAACGAGTCAAAGCTGAGGTCATGCGTGCTGCTGTGATGTCATGCGTGCTGCTGTaGTGTAAACCTGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: GRLRVKRVKAEVMRAAVMSCVLL*CKPAAT
Trigger: AGTGGCGGCAGGTTTACATCACAGCAGCACGCATGA...CATCACAGCAGCACGCATGACCTCAGCTTTGACTCGTTTAACTCTGAGACGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGTCCCCCACCACCAGCTaGTCTGAAGGGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMSPTTS*SEGMVF
Trigger: GAAGACCATCCCTTCAGAGCAGCTGGTGGTGGGGGA...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTTCCCCCACCACCAGCTaGTCTGAAGGGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCSPTTS*SEGMVF
Trigger: GAAGACCATCCCTTCAGAGCAGCTGGTGGTGGGGGA...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAAGCTCCCAGGGCTTaGATGAGGCCAATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LTMSALQGNSPANGQKMNKAPRA*MRPMCR
Trigger: CCTGCACATTGGCCTCATGCAAGCCCTGGGAGCTTT...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGGCCACTTCCATCTCCTaGAGACCCTCGGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMATSIS*RPSGEL
Trigger: CAACTCACCCGAGGGTCTGCAGGAGATGGAAGTGGC...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCTGGTGCATGCTGGGCTaGTGGCGCCGCGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCWCMLG*WRRGLR
Trigger: CCGCAGCCCGCGGCGCCACCAGCCCAGCATGCACCA...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp GGACGTCTCAGAGTTAAACGAGTCAAAGCTGAGGTCATGCGTGCTGCTGTGATGGACCCTCGGGTGAGTTaGCCTTTTTCGAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRLRVKRVKAEVMRAAVMDPRVS*PFSSKE
Trigger: CTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTC...CATCACAGCAGCACGCATGACCTCAGCTTTGACTCGTTTAACTCTGAGACGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACTGGCCAGGGAAACTGTaGCAAGGGCCTTCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LTMSALQGNSPANGQKMNWPGKL*QGPSRR
Trigger: CCTTCTTGAAGGCCCTTGCCACAGTTTCCCTGGCCA...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAGGCAATATGGCCAATaGTGGTGCGGTCACCCGTGT +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMRQYGQ*WCGHPC
Trigger: ACACGGGTGACCGCACCATCATTGGCCATATTGCCT...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGCTCTTGTCTGAATTTTaGCGATGTCTGCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTLLSEF*RCLHCR
Trigger: CCTGCAGTGCAGACATCGTCAAAATTCAGACAAGAG...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTTGCATTTCTCTAGGATaGGCTCAGGGGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCCISLG*AQGPPS
Trigger: TGAAGGGGGCCCCTGAGCGCATCCTAGAGAAATGCA...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGTGCATTTCTCTAGGATaGGCTCAGGGGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMCISLG*AQGPPS
Trigger: TGAAGGGGGCCCCTGAGCGCATCCTAGAGAAATGCA...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACCTGAAGAGACCCTGCTaGAAGATGGAATTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LTMSALQGNSPANGQKMNLKRPC*KMEFLR
Trigger: CCGGAGGAATTCCATCTTCCAGCAGGGTCTCTTCAG...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTCTGCTTGGGAGGGGTaGGGGAGTTGGGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNSAWEG*GSWAHP
Trigger: GGGATGGGCCCAACTCCCTCACCCCTCCCAAGCAGA...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTATGGAGTCCAGGACTTaGTACTTCAGGGACACAGCG +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCMESRT*YFRDTA
Trigger: CGCTGTGTCCCTGAAGTATCAAGTCCTGGACTCCAT...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGGGTTTTCTGGTGCATaGTGGGCTGGTGGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: NISEHPAYSFLHENFLLSGFSGA*WAGGAA
Trigger: CGCGGCGCCACCAGCCCAGCATGCACCAGAAAACCC...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp GGACGTCTCAGAGTTAAACGAGTCAAAGCTGAGGTCATGCGTGCTGCTGTGATGCACGTTGTTCAGGGATaGAGACTTGTCGCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: GRLRVKRVKAEVMRAAVMHVVQG*RLVAGV
Trigger: TACTCCAGCGACAAGTCTGCATCCCTGAACAACGTG...CATCACAGCAGCACGCATGACCTCAGCTTTGACTCGTTTAACTCTGAGACGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACGGAGACAGCCACTCCTaGCACAATGTGAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: LTMSALQGNSPANGQKMNGDSHS*HNVNKV
Trigger: CACTTTGTTCACATTGTGGCAGGAGTGGCTGTCTCC...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp GAGCAAGGAGACCATGAAAACATACCTTCTCAGGGGATCTGCAGAAATCTTAGGTGTCCTTCAGCTCCATaGCAGTCACCACAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: EQGDHENIPSQGICRNLRCPSAP*QSPQRP
Trigger: AGGCCGCTGTGGTGACTGGCATGGAGCTGAAGGACA...CCTAAGATTTCTGCAGATCCCCTGAGAAGGTATGTTTTCATGGTCTCCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp GGACGTCTCAGAGTTAAACGAGTCAAAGCTGAGGTCATGCGTGCTGCTGTGATGGGCTGCATTTTTGGCTaGATCAGAACCTGCTATCCC +
Preference number: 4 (lower is better)
Translates to: GRLRVKRVKAEVMRAAVMGCIFG*IRTCYP
Trigger: GGGATAGCAGGTTCTGATGCAGCCAAAAATGCAGCC...CATCACAGCAGCACGCATGACCTCAGCTTTGACTCGTTTAACTCTGAGACGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGCAGTGGCTGAGGTGTTaGCGGTGGAGATACCGGCGG +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLQWLRC*RWRYRR
Trigger: CCGCCGGTATCTCCACCGCCAACACCTCAGCCACTG...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTTCTGGTGCATGCTaGGCTGGTGGCGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNFSGAC*AGGAAG
Trigger: GCCCGCGGCGCCACCAGCCCAGCATGCACCAGAAAA...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGCACGGAGTAAATTTCTaGGGTTTTCTGGTGCATGCT +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTHGVNF*GFLVHA
Trigger: AGCATGCACCAGAAAACCCCAGAAATTTACTCCGTG...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTATGTCTGCAGGGATCTaGTCTCCTCCTTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCMSAGI*SPPLTS
Trigger: GGAGGTCAAAGGAGGAGACCAGATCCCTGCAGACAT...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGCTGTGTGGAAGGTCTTaGCAGTGCTCTTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMLCGRS*QCSCPV
Trigger: CACTGGACAAGAGCACTGCCAAGACCTTCCACACAG...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAGATCCCCGTTAAAATaGCCACCAGACCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMRSPLK*PPDQAH
Trigger: GTGTGCTTGGTCTGGTGGTCATTTTAACGGGGATCT...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp GACCCTCGGGTGAGTTGGCCTTTTTCGAGCAAGGAGACCATGAAAACATACCTTAGATCCCCGTTAAAATaGCCACCAGACCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: DPRVSWPFSSKETMKTYLRSPLK*PPDQAH
Trigger: GTGTGCTTGGTCTGGTGGTCATTTTAACGGGGATCT...AAGGTATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGAGCGTCTATGTCAAATaGGTAGGTTTCTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTSVYVK*VGFWKL
Trigger: GAGTTTCCAGAAACCTACTCATTTGACATAGACGCT...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp GACCCTCGGGTGAGTTGGCCTTTTTCGAGCAAGGAGACCATGAAAACATACCTTGCTCCACAGCAATGTTaGGGCGATGTGCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: DPRVSWPFSSKETMKTYLAPQQC*GDVQCL
Trigger: AAGACATTGCACATCGCCTCAACATTGCTGTGGAGC...AAGGTATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCCGATCGCCAGCCGCTaGACCGGGGAGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFPIASR*TGEVAP
Trigger: TGGTGCCACCTCCCCGGTGCAGCGGCTGGCGATCGG...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGTCTGGGGTTTTCTGGTaGATGCTGGGCTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLSGVFW*MLGWWR
Trigger: GCGCCACCAGCCCAGCATGCACCAGAAAACCCCAGA...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp GAGCAAGGAGACCATGAAAACATACCTTCTCAGGGGATCTGCAGAAATCTTAGGCTCTTGTCCAGTGGGTaGTCCTCGCCGTTGATCATG +
Preference number: 4 (lower is better)
Translates to: EQGDHENIPSQGICRNLRLLSSG*SSPLIM
Trigger: CATGATCAACGGCGAGGAGCACCCACTGGACAAGAG...CCTAAGATTTCTGCAGATCCCCTGAGAAGGTATGTTTTCATGGTCTCCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGGCTGCATTTTTGGCTaGATCAGAACCTGCTATCCC +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCGCIFG*IRTCYP
Trigger: GGGATAGCAGGTTCTGATGCAGCCAAAAATGCAGCC...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGAAGATGAACAAGTGTaGCCCAACGTGCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCEDEQV*PNVLLR
Trigger: TCTCAGCAGCACGTTGGGGCACACTTGTTCATCTTC...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTCAGTGGCTGAGGTGTTaGCGGTGGAGATACCGGCGG +
Preference number: 4 (lower is better)
Translates to: NISEHPAYSFLHENFLLSQWLRC*RWRYRR
Trigger: CCGCCGGTATCTCCACCGCCAACACCTCAGCCACTG...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCTTTTCTGGTGCATGCTaGGCTGGTGGCGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCFSGAC*AGGAAG
Trigger: GCCCGCGGCGCCACCAGCCCAGCATGCACCAGAAAA...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGGCCAATGAGGCAATATaGCCAATGATGGTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMANEAI*PMMVRS
Trigger: TGACCGCACCATCATTGGCCATATTGCCTCATTGGC...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTACTGTCATCCTGTTCTaGGTCAGTGTCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCTVILF*VSVPVL
Trigger: CAAGACTGGGACACTGACCCAGAACAGGATGACAGT...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGGCCTTTAATAGGGTGTaGAAAGGAGTTCTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTAFNRV*KGVLSN
Trigger: ATTGCTCAGAACTCCTTTCCACACCCTATTAAAGGC...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAAAGAGGTGGGATGGGGTaGCGTGGCCAGGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKRGGMG*RGQGNC
Trigger: ACAGTTTCCCTGGCCACGCCACCCCATCCCACCTCT...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGGAGATGACCAGAGGTaGGATGGGGTGGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NISEHPAYSFLHENFLLSGDDQR*DGVAWP
Trigger: TGGCCACGCCACCCCATCCCACCTCTGGTCATCTCC...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAACGGGGCATAAAGGGCTaGGGAGATGACCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKRGIKG*GDDQRW
Trigger: CCACCTCTGGTCATCTCCCCAGCCCTTTATGCCCCG...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATCTCCCCCGTGAGAGATaGGTTATCCACCCGACACCC +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNLPRER*VIHPTP
Trigger: GGGTGTCGGGTGGATAACTCATCTCTCACGGGGGAG...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTTCAGCCACAAAGATCTaGTTGTCGAACCACAGATGG +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCSATKI*LSNHRW
Trigger: CCATCTGTGGTTCGACAATCAGATCTTTGTGGCTGA...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTCACTCCGGCATTTGGTaGCTGCATCTGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: NISEHPAYSFLHENFLLSHSGIW*LHLARW
Trigger: CCACCGTGCCAGATGCAGTCACCAAATGCCGGAGTG...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAAGCCAATGTGCAGGTATaGGTACACAGCGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKANVQV*VHSERL
Trigger: CAGCCGCTCGCTGTGTACTCATACCTGCACATTGGC...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp ATGCCTGGGTTACACAAGACTATTAACATCAAGGAGTTTCAAATACACATAAACGGCACCAGCCTTAAATaGCGCCCGCCCCGCCCACGT +
Preference number: 4 (lower is better)
Translates to: MPGLHKTINIKEFQIHINGTSLK*RPPRPR
Trigger: ACGTGGGCGGGGCGGGCGGCATTTAAGGCTGGTGCC...GTTTATGTGTATTTGAAACTCCTTGATGTTAATAGTCTTGTGTAACCCAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGTGTCCTTCAGCTCCATaGCAGTCACCACAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLCPSAP*QSPQRP
Trigger: AGGCCGCTGTGGTGACTGGCATGGAGCTGAAGGACA...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp CATGAAAACATACCTTCTCAGGGGATCTGCAGAAATCTTAGGGAGGTCATGGGGGAAGATGAACAAGTGTaGCCCAACGTGCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HENIPSQGICRNLREVMGEDEQV*PNVLLR
Trigger: TCTCAGCAGCACGTTGGGGCACACTTGTTCATCTTC...CCCCATGACCTCCCTAAGATTTCTGCAGATCCCCTGAGAAGGTATGTTTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp GACCCTCGGGTGAGTTGGCCTTTTTCGAGCAAGGAGACCATGAAAACATACCTTCTGACAAAACGTTATTaGTGGAGAGCACCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: DPRVSWPFSSKETMKTYLLTKRY*WRAPGN
Trigger: GTTGCCAGGTGCTCTCCAGCAATAACGTTTTGTCAG...AAGGTATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGAGGTGTTGGCGGTaGAGATACCGGCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFLRCWR*RYRRRR
Trigger: GCGCCGCCGCCGGTATCTCCACCGCCAACACCTCAG...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGACAATGTTATTATCTTaGATAAGGAGGCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTTMLLS*IRRPKS
Trigger: GGACTTGGGCCTCCTTATCCAAGATAATAACATTGT...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGGACATTTTCCTGTCCTaGCTTGAACTCTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMDIFLS*LELCSV
Trigger: AACCGAGCAGAGTTCAAGCCAGGACAGGAAAATGTC...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACCAATCTCCTGGTAGTTaGCTAAGATCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: LTMSALQGNSPANGQKMNQSPGS*LRSHPA
Trigger: AGCTGGATGAGATCTTAGCCAACTACCAGGAGATTG...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTCTGTCCTTATTCTTGTaGCGAGGCTTCCTGTTCATG +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCLSLFL*RGFLFM
Trigger: CATGAACAGGAAGCCTCGCCACAAGAATAAGGACAG...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGTGTGATTTTTCTTTTTaGGTTCCAGGCAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTCDFSF*VPGSCS
Trigger: AGAACAACTGCCTGGAACTCAAAAAGAAAAATCACA...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGCACCACCAGCTGCTCTaGAGGGATGGTCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLHHQLL*RDGLLL
Trigger: GAGAAGAAGACCATCCCTTCAGAGCAGCTGGTGGTG...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTTCCACCCGACACCCCTaGGAAGACAGCACCCTGATG +
Preference number: 4 (lower is better)
Translates to: VSILHTAFCMKISSCLNFSTRHP*EDSTLM
Trigger: CATCAGGGTGCTGTCTTCTCAGGGGTGTCGGGTGGA...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAATCCACCCGACACCCCTaGGAAGACAGCACCCTGATG +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHESTRHP*EDSTLM
Trigger: CATCAGGGTGCTGTCTTCTCAGGGGTGTCGGGTGGA...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAACACTCCGGCATTTGGTaGCTGCATCTGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHEHSGIW*LHLARW
Trigger: CCACCGTGCCAGATGCAGTCACCAAATGCCGGAGTG...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGTGTTTCACTGTTGGCTaGAATGATCCCCACACTCTT +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMCFTVG*NDPHTL
Trigger: AAGAGTGTGGGGATCATTTCAGCCAACAGTGAAACA...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp GACCCTCGGGTGAGTTGGCCTTTTTCGAGCAAGGAGACCATGAAAACATACCTTCTTGTGCATAGACGGTaGAATACACAAGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: DPRVSWPFSSKETMKTYLLVHRR*NTQGKL
Trigger: GAGCTTTCCTTGTGTATTTCACCGTCTATGCACAAG...AAGGTATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGAAATTTCCTCTTGTCTaGATTTTGACGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTKFPLV*ILTMSA
Trigger: TGCAGACATCGTCAAAATTCAGACAAGAGGAAATTT...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGCTCTTGTCCAGTGGGTaGTCCTCGCCGTTGATCATG +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLLLSSG*SSPLIM
Trigger: CATGATCAACGGCGAGGAGCACCCACTGGACAAGAG...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAACCGGCATTTGGTGACTaGATCTGGCACGGTGGACCG +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHEPAFGD*IWHGGP
Trigger: CGGTCCACCGTGCCAGATGCAGTCACCAAATGCCGG...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGGGCTGCATCAGAACCTaGTATCCCCATGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLGCIRT*YPHGNP
Trigger: GGGATTGCCATGGGGATAGCAGGTTCTGATGCAGCC...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAAAGCTCCCAGGGCTTaGATGAGGCCAATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLKAPRA*MRPMCR
Trigger: CCTGCACATTGGCCTCATGCAAGCCCTGGGAGCTTT...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTTTTGCTGGACTAGGATaGCAACAAAGAAAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCFAGLG*QQRKPC
Trigger: ACACGGCTTTCTTTGTTGGCATCCTAGTCCAGCAAA...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACATCAGATCTGCTATTTaGTGGACTAGGATGCCAACA +
Preference number: 4 (lower is better)
Translates to: LTMSALQGNSPANGQKMNIRSAI*WTRMPT
Trigger: TGTTGGCATCCTAGTCCAGCAAATAGCAGATCTGAT...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGCACGGAGTAAATTTCTaGGGTTTTCTGGTGCATGCT +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMHGVNF*GFLVHA
Trigger: AGCATGCACCAGAAAACCCCAGAAATTTACTCCGTG...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTATGCAGACTTGTCGCTaGAGTACTGAATCCCATATG +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCMQTCR*STESHM
Trigger: CATATGGGATTCAGTACTCCAGCGACAAGTCTGCAT...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGTTGAATGGTCCTCACTaGTGTCAGCCACAAAGATCT +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMLNGPH*CQPQRS
Trigger: AGATCTTTGTGGCTGACACCAGTGAGGACCATTCAA...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAGGAAGCGCTTGCCGTaGGGGTCATCCATCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHERKRLP*GSSISW
Trigger: CCACGAGATGGATGACCCCCACGGCAAGCGCTTCCT...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAACTGCATCTGGCACGGTaGACCGAGGGGGATCGATCA +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHELHLAR*TEGDRS
Trigger: TGATCGATCCCCCTCGGTCCACCGTGCCAGATGCAG...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTTTGGTGACTGCATCTaGCACGGTGGACCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFFGDCI*HGGPRG
Trigger: CCCCCTCGGTCCACCGTGCCAGATGCAGTCACCAAA...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGATGATCAGCTTCTGCTaGGGGGATGTCCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLMISFC*GDVRAK
Trigger: CTTTGCCCGGACATCCCCCCAGCAGAAGCTGATCAT...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTACAAAACGTTATTGCTaGAGAGCACCTGGCAACTGT +
Preference number: 4 (lower is better)
Translates to: MSALQGNSPANGQKMNKCTKRYC*RAPGNC
Trigger: ACAGTTGCCAGGTGCTCTCCAGCAATAACGTTTTGT...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTAGGCAATATGGCCAATaGTGGTGCGGTCACCCGTGT +
Preference number: 4 (lower is better)
Translates to: NISEHPAYSFLHENFLLSRQYGQ*WCGHPC
Trigger: ACACGGGTGACCGCACCATCATTGGCCATATTGCCT...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp CATGAAAACATACCTTCTCAGGGGATCTGCAGAAATCTTAGGGAGGTCATGGGGTTTGCTGGACTAGGATaGCAACAAAGAAAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: HENIPSQGICRNLREVMGFAGLG*QQRKPC
Trigger: ACACGGCTTTCTTTGTTGGCATCCTAGTCCAGCAAA...CCCCATGACCTCCCTAAGATTTCTGCAGATCCCCTGAGAAGGTATGTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCCAGATCAGGATGGCGTaGGGCACAGCCACAAACCAG +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCQIRMA*GTATNQ
Trigger: CTGGTTTGTGGCTGTGCCGCACGCCATCCTGATCTG...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTCAGATCAGGATGGCGTaGGGCACAGCCACAAACCAG +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFQIRMA*GTATNQ
Trigger: CTGGTTTGTGGCTGTGCCGCACGCCATCCTGATCTG...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAAATGTCTGCAGGGATCTaGTCTCCTCCTTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKMSAGI*SPPLTS
Trigger: GGAGGTCAAAGGAGGAGACCAGATCCCTGCAGACAT...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTTCTCGGAATCTCGGATaGCGAGAGCTTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VSILHTAFCMKISSCLNFSRNLG*RELAEG
Trigger: TCCCTCAGCAAGCTCTCGTCATCCGAGATTCCGAGA...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCTCTCGGAATCTCGGATaGCGAGAGCTTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCSRNLG*RELAEG
Trigger: TCCCTCAGCAAGCTCTCGTCATCCGAGATTCCGAGA...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAACACCACCAGCTGCTCTaGAGGGATGGTCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHEHHQLL*RDGLLL
Trigger: GAGAAGAAGACCATCCCTTCAGAGCAGCTGGTGGTG...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACTCGTGGATGGAGAGCTaGAATTTATTAGTAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LTMSALQGNSPANGQKMNSWMES*NLLVEL
Trigger: TAACTCTACTAATAAATTTCAGCTCTCCATCCACGA...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTTCTGGGGTTTTCTGGTaGATGCTGGGCTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFSGVFW*MLGWWR
Trigger: GCGCCACCAGCCCAGCATGCACCAGAAAACCCCAGA...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGGGAGACAGCCACTCCTaGCACAATGTGAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLGDSHS*HNVNKV
Trigger: CACTTTGTTCACATTGTGGCAGGAGTGGCTGTCTCC...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCCTTGGCCATCCGTTTTaGTGTCAGCGACAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCLGHPF*CQRQGH
Trigger: GTGACCCTGTCGCTGACAGCAAAACGGATGGCCAAG...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCGGAAGGTCTTGGCAGTaGTCTTGTCCAGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCGRSWQ*SCPVGA
Trigger: AGCACCCACTGGACAAGAGCACTGCCAAGACCTTCC...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCAGTGCTCTTGTCCAGTaGGTGCTCCTCGCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCSALVQ*VLLAVD
Trigger: ATCAACGGCGAGGAGCACCCACTGGACAAGAGCACT...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAATGATCAGCTTCTGCTaGGGGGATGTCCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHEMISFC*GDVRAK
Trigger: CTTTGCCCGGACATCCCCCCAGCAGAAGCTGATCAT...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAATACACAGCGAGCGGCTaGTTCACCAGCCTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHEYTASG*FTSLSL
Trigger: TAAGGACAGGCTGGTGAACCAGCCGCTCGCTGTGTA...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATCTGAAGAGACCCTGCTaGAAGATGGAATTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNLKRPC*KMEFLR
Trigger: CCGGAGGAATTCCATCTTCCAGCAGGGTCTCTTCAG...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTTGGGATGGGGTGGCGTaGCCAGGGAAACTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFWDGVA*PGKLWQ
Trigger: TTGCCACAGTTTCCCTGGCCACGCCACCCCATCCCA...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTATGGAGTCCAGGACTTaGTACTTCAGGGACACAGCG +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFMESRT*YFRDTA
Trigger: CGCTGTGTCCCTGAAGTATCAAGTCCTGGACTCCAT...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTCAAACGGTCAGAAGATaGACAAGTGTGCCCCAACGT +
Preference number: 4 (lower is better)
Translates to: NISEHPAYSFLHENFLLSQTVRR*TSVPQR
Trigger: ACGTTGGGGCACACTTGTTCATCTTCTGACCGTTTG...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCAGACCCTCGGGTaGGTTGGCCTTTTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFLQTLG*VGLFRA
Trigger: TGCTCGAAAAAGGCCAACTCACCCGAGGGTCTGCAG...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACATGAAACATGACTaGCAAAACGTTATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ILTMSALQGNSPANGQKMNMKHD*QNVIAG
Trigger: TCCAGCAATAACGTTTTGTCAGTCATGTTTCATGTT...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR GCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATCACGTTGTTCAGGGATaGAGACTTGTCGCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNHVVQG*RLVAGV
Trigger: TACTCCAGCGACAAGTCTGCATCCCTGAACAACGTG...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAATTCTGGAAACTCGTCTaGTGGCAGGTAGAGATGACA +
Preference number: 4 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKFWKLV*WQVEMT
Trigger: TGTCATCTCTACCTGCCAGCAGACGAGTTTCCAGAA...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATGCCAATGAGGCAATATaGCCAATGATGGTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNANEAI*PMMVRS
Trigger: TGACCGCACCATCATTGGCCATATTGCCTCATTGGC...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAGAAAAGGATGCCGATaGAGACAGCCACTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHERKGCR*RQPLLP
Trigger: TGGCAGGAGTGGCTGTCTCCATCGGCATCCTTTTCT...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCAGAAAAGGATGCCGATaGAGACAGCCACTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCRKGCR*RQPLLP
Trigger: TGGCAGGAGTGGCTGTCTCCATCGGCATCCTTTTCT...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCCTGTGTGGAAGGTCTTaGCAGTGCTCTTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCLCGRS*QCSCPV
Trigger: CACTGGACAAGAGCACTGCCAAGACCTTCCACACAG...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGTCACAGCTTTCTTCATaGTGGGGACATTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLSQLSS*WGHFPV
Trigger: GACAGGAAAATGTCCCCATCATGAAGAAAGCTGTGA...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATAGGGGGATCGATCATTaGCAAGAGTCCCACAAAACA +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNRGIDH*QESHKT
Trigger: TGTTTTGTGGGACTCTTGTCAATGATCGATCCCCCT...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAGCTCCACAGCAATGTTaGGGCGATGTGCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHEAPQQC*GDVQCL
Trigger: AAGACATTGCACATCGCCTCAACATTGCTGTGGAGC...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGGAGGCTTCCTGTTCATaGTGTCACTTTCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLEASCS*CHFQLS
Trigger: AGAAAGCTGAAAGTGACATCATGAACAGGAAGCCTC...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAAGAGGCTTCCTGTTCATaGTGTCACTTTCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKEASCS*CHFQLS
Trigger: AGAAAGCTGAAAGTGACATCATGAACAGGAAGCCTC...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAACCAATGATGATCTGTaGGGTGATCCCCACCCAGAT +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHETNDDL*GDPHPD
Trigger: ATCTGGGTGGGGATCACCTCACAGATCATCATTGGT...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTCTGGAAACTCGTCTaGTGGCAGGTAGAGATGACA +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNFWKLV*WQVEMT
Trigger: TGTCATCTCTACCTGCCAGCAGACGAGTTTCCAGAA...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATCAAGACCATGTCGGCTaGATTTTTGGCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNQDHVG*IFGCIR
Trigger: TCTGATGCAGCCAAAAATGCAGCCGACATGGTCTTG...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTACTGTCATCCTGTTCTaGGTCAGTGTCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFTVILF*VSVPVL
Trigger: CAAGACTGGGACACTGACCCAGAACAGGATGACAGT...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTAAGACTTGGTTTGAATaGTCCTCACTGGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: NISEHPAYSFLHENFLLSKTWFE*SSLVSA
Trigger: GGCTGACACCAGTGAGGACCATTCAAACCAAGTCTT...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATGACATTTTCCTGTCCTaGCTTGAACTCTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNDIFLS*LELCSV
Trigger: AACCGAGCAGAGTTCAAGCCAGGACAGGAAAATGTC...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGCAATCTCCTGGTAGTTaGCTAAGATCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLQSPGS*LRSHPA
Trigger: AGCTGGATGAGATCTTAGCCAACTACCAGGAGATTG...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTCTAGGTATTCCCTCTaGTACCTTGTCCATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNSRYSL*YLVHSC
Trigger: GCAGGAATGGACAAGGTACCAGAGGGAATACCTAGA...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCTCAGCCACAAAGATCTaGTTGTCGAACCACAGATGG +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCSATKI*LSNHRW
Trigger: CCATCTGTGGTTCGACAATCAGATCTTTGTGGCTGA...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTGTCAAAGACTTGGTTTaGATGGTCCTCACTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFVKDLV*MVLTGV
Trigger: GACACCAGTGAGGACCATTCAAACCAAGTCTTTGAC...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTAGGGGGATCGATCATTaGCAAGAGTCCCACAAAACA +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFRGIDH*QESHKT
Trigger: TGTTTTGTGGGACTCTTGTCAATGATCGATCCCCCT...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTCAAGACCATGTCGGCTaGATTTTTGGCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: VSILHTAFCMKISSCLNFQDHVG*IFGCIR
Trigger: TCTGATGCAGCCAAAAATGCAGCCGACATGGTCTTG...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTGCAGGCCCCAGTAGATaGCTGGGTTACACAAGACTA +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFAGPSR*LGYTRL
Trigger: TAGTCTTGTGTAACCCAGGCATCTACTGGGGCCTGC...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp ATGCCTGGGTTACACAAGACTATTAACATCAAGGAGTTTCAAATACACATAAACATTTCTGGGGTTTTCTaGTGCATGCTGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MPGLHKTINIKEFQIHINISGVF*CMLGWW
Trigger: CCACCAGCCCAGCATGCACCAGAAAACCCCAGAAAT...GTTTATGTGTATTTGAAACTCCTTGATGTTAATAGTCTTGTGTAACCCAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATATGCAGACTTGTCGCTaGAGTACTGAATCCCATATG +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNMQTCR*STESHM
Trigger: CATATGGGATTCAGTACTCCAGCGACAAGTCTGCAT...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTTTGAATGGTCCTCACTaGTGTCAGCCACAAAGATCT +
Preference number: 4 (lower is better)
Translates to: NISEHPAYSFLHENFLLSLNGPH*CQPQRS
Trigger: AGATCTTTGTGGCTGACACCAGTGAGGACCATTCAA...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTAAGACTTGGTTTGAATaGTCCTCACTGGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VSILHTAFCMKISSCLNFKTWFE*SSLVSA
Trigger: GGCTGACACCAGTGAGGACCATTCAAACCAAGTCTT...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAATGGAAACTCGTCTGCTaGCAGGTAGAGATGACAGAA +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHEWKLVC*QVEMTE
Trigger: TTCTGTCATCTCTACCTGCCAGCAGACGAGTTTCCA...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGGAAACTCGTCTGCTaGCAGGTAGAGATGACAGAA +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFWKLVC*QVEMTE
Trigger: TTCTGTCATCTCTACCTGCCAGCAGACGAGTTTCCA...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTCTGTCCTTATTCTTGTaGCGAGGCTTCCTGTTCATG +
Preference number: 4 (lower is better)
Translates to: VSILHTAFCMKISSCLNFLSLFL*RGFLFM
Trigger: CATGAACAGGAAGCCTCGCCACAAGAATAAGGACAG...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTTTGTCGCTGGAGTACTaGATCCCATATGCAATCCAA +
Preference number: 4 (lower is better)
Translates to: VSILHTAFCMKISSCLNFLSLEY*IPYAIQ
Trigger: TTGGATTGCATATGGGATTCAGTACTCCAGCGACAA...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTCACAGCTTTCTTCATaGTGGGGACATTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFSQLSS*WGHFPV
Trigger: GACAGGAAAATGTCCCCATCATGAAGAAAGCTGTGA...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTACCAATGATGATCTGTaGGGTGATCCCCACCCAGAT +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFTNDDL*GDPHPD
Trigger: ATCTGGGTGGGGATCACCTCACAGATCATCATTGGT...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCAAACGGTCAGAAGATaGACAAGTGTGCCCCAACGT +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFQTVRR*TSVPQR
Trigger: ACGTTGGGGCACACTTGTTCATCTTCTGACCGTTTG...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTAGTGCAAAACATCAGTaGGCATCCTGCATACAGCTT +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFSAKHQ*ASCIQL
Trigger: AAGCTGTATGCAGGATGCTCACTGATGTTTTGCACT...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATAGATCTGCTATTTGCTaGACTAGGATGCCAACAAAG +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNRSAIC*TRMPTK
Trigger: CTTTGTTGGCATCCTAGTCCAGCAAATAGCAGATCT...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTGTCAAAGACTTGGTTTaGATGGTCCTCACTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFVKDLV*MVLTGV
Trigger: GACACCAGTGAGGACCATTCAAACCAAGTCTTTGAC...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGTCGTGGATGGAGAGCTaGAATTTATTAGTAGAGTTA +
Preference number: 4 (lower is better)
Translates to: TSVSILHTAFCMKISSCLSWMES*NLLVEL
Trigger: TAACTCTACTAATAAATTTCAGCTCTCCATCCACGA...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAGCGTCTATGTCAAATaGGTAGGTTTCTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: SFKVQNISEHPAYSFLHESVYVK*VGFWKL
Trigger: GAGTTTCCAGAAACCTACTCATTTGACATAGACGCT...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCTTGGCTGTGATGGGATaGTCACCAGTAACCATAATA +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCLAVMG*SPVTII
Trigger: TATTATGGTTACTGGTGATCATCCCATCACAGCCAA...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTTGGCTGTGATGGGATaGTCACCAGTAACCATAATA +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFLAVMG*SPVTII
Trigger: TATTATGGTTACTGGTGATCATCCCATCACAGCCAA...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp ATGCCTGGGTTACACAAGACTATTAACATCAAGGAGTTTCAAATACACATAAACCTCTTGTCTGAATTTTaGCGATGTCTGCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: MPGLHKTINIKEFQIHINLLSEF*RCLHCR
Trigger: CCTGCAGTGCAGACATCGTCAAAATTCAGACAAGAG...GTTTATGTGTATTTGAAACTCCTTGATGTTAATAGTCTTGTGTAACCCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTCTATTGCTGAGTTTGTaGTCATCCAGATGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFLLLSL*SSRWSS
Trigger: AGAACTCCATCTGGATGACCACAAACTCAGCAATAG...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATACAATGTTATTATCTTaGATAAGGAGGCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SVSILHTAFCMKISSCLNTMLLS*IRRPKS
Trigger: GGACTTGGGCCTCCTTATCCAAGATAATAACATTGT...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTTCTAGGTATTCCCTCTaGTACCTTGTCCATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFSRYSL*YLVHSC
Trigger: GCAGGAATGGACAAGGTACCAGAGGGAATACCTAGA...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTTGTGCATAGACGGTaGAATACACAAGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFLVHRR*NTQGKL
Trigger: GAGCTTTCCTTGTGTATTTCACCGTCTATGCACAAG...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTAGTGCAAAACATCAGTaGGCATCCTGCATACAGCTT +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFSAKHQ*ASCIQL
Trigger: AAGCTGTATGCAGGATGCTCACTGATGTTTTGCACT...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCCAAGTCCTAGAGCTTTaGTCAAAGACTTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCQVLEL*SKTWFE
Trigger: TTCAAACCAAGTCTTTGACCAAAGCTCTAGGACTTG...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTCAAGTCCTAGAGCTTTaGTCAAAGACTTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: VSILHTAFCMKISSCLNFQVLEL*SKTWFE
Trigger: TTCAAACCAAGTCTTTGACCAAAGCTCTAGGACTTG...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGTGATTTTTCTTTTTaGGTTCCAGGCAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFCDFSF*VPGSCS
Trigger: AGAACAACTGCCTGGAACTCAAAAAGAAAAATCACA...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR TCA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTAAATTTCCTCTTGTCTaGATTTTGACGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSILHTAFCMKISSCLNFKFPLV*ILTMSA
Trigger: TGCAGACATCGTCAAAATTCAGACAAGAGGAAATTT...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR GCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTATCAGATCTGCTATTTaGTGGACTAGGATGCCAACA +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFIRSAI*WTRMPT
Trigger: TGTTGGCATCCTAGTCCAGCAAATAGCAGATCTGAT...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTAGATCTGCTATTTGCTaGACTAGGATGCCAACAAAG +
Preference number: 4 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFRSAIC*TRMPTK
Trigger: CTTTGTTGGCATCCTAGTCCAGCAAATAGCAGATCT...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CCA 90 bp ATGCCTGGGTTACACAAGACTATTAACATCAAGGAGTTTCAAATACACATAAACTTGCTGGAGAGCACCTaGCAACTGTTTTACAAGAAA +
Preference number: 4 (lower is better)
Translates to: MPGLHKTINIKEFQIHINLLEST*QLFYKK
Trigger: TTTCTTGTAAAACAGTTGCCAGGTGCTCTCCAGCAA...GTTTATGTGTATTTGAAACTCCTTGATGTTAATAGTCTTGTGTAACCCAGGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS GCA 90 bp GCGGCGCGGGCCCTGCACGCACCTCCGCGGCCGATCGCCAGCCGCTaGACCGGGGAGGTGGCACCAGCCTTAAATGCCGCCCGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: AARALHAPPRPIASR*TGEVAPALNAARPA
Trigger: GGCGGGGCGGGCGGCATTTAAGGCTGGTGCCACCTCCCCGGTGCAGCGGCTGGCGATCGGCCGCGGAGGTGCGTGCAGGGCCCGCGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS GCA 90 bp TGGCTGAGGTGTTGGCGGTGGAGATACCGGCGGCGGCGCGGGCCCTaGACGCACCTCCGCGGCCGATCGCCAGCCGCTGCACCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: WLRCWRWRYRRRRGP*THLRGRSPAAAPGR
Trigger: CCTCCCCGGTGCAGCGGCTGGCGATCGGCCGCGGAGGTGCGTGCAGGGCCCGCGCCGCCGCCGGTATCTCCACCGCCAACACCTCAGCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTACCATGAGGAAGCGCTaGCCGTGGGGGTCATCCATC +
Preference number: 5 (lower is better)
Translates to: MSALQGNSPANGQKMNKCTMRKR*PWGSSI
Trigger: GATGGATGACCCCCACGGCAAGCGCTTCCTCATGGT...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS TCA 90 bp CCCAAGTACACGTTGTTCAGGGATGCAGACTTGTCGCTGGAGTACTaGATCCCATATGCAATCCAACAGAGAAAGGCGCCCACCCACAGG +
Preference number: 5 (lower is better)
Translates to: PKYTLFRDADLSLEY*IPYAIQQRKAPTHR
Trigger: CCTGTGGGTGGGCGCCTTTCTCTGTTGGATTGCATATGGGATTCAGTACTCCAGCGACAAGTCTGCATCCCTGAACAACGTGTACTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGGGTGCTCCTCGCCGTaGATCATGATGGTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: MSALQGNSPANGQKMNKCGCSSP*IMMVLH
Trigger: ATGCAGCACCATCATGATCAACGGCGAGGAGCACCC...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACGTCACCACAGCGGCCTaGGCATCCCGTTTGTTAACT +
Preference number: 5 (lower is better)
Translates to: LTMSALQGNSPANGQKMNVTTAA*ASRLLT
Trigger: AGTTAACAAACGGGATGCCAAGGCCGCTGTGGTGAC...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGGGGCAGAAAGCCCTCTaGTGCATAGACGGTGAAATA +
Preference number: 5 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTGQKAL*CIDGEI
Trigger: TATTTCACCGTCTATGCACAAGAGGGCTTTCTGCCC...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACGATGGAGTCCAGGACTaGATACTTCAGGGACACAGC +
Preference number: 5 (lower is better)
Translates to: LTMSALQGNSPANGQKMNDGVQD*ILQGHS
Trigger: GCTGTGTCCCTGAAGTATCAAGTCCTGGACTCCATC...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTTCTTGGCCATCCGTTTaGCTGTCAGCGACAGGGTCA +
Preference number: 5 (lower is better)
Translates to: MSALQGNSPANGQKMNKCSWPSV*LSATGS
Trigger: TGACCCTGTCGCTGACAGCAAAACGGATGGCCAAGA...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGCAGCCCAAGTACACGTaGTTCAGGGATGCAGACTTG +
Preference number: 5 (lower is better)
Translates to: ILTMSALQGNSPANGQKMQPKYT*FRDADL
Trigger: CAAGTCTGCATCCCTGAACAACGTGTACTTGGGCTG...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGGCCTTGGCATCCCGTTaGTTAACTTGCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: ILTMSALQGNSPANGQKMALASR*LTCSTA
Trigger: TGCTGTGGAGCAAGTTAACAAACGGGATGCCAAGGC...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAGCCTGTCCTTATTCTaGTGGCGAGGCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: ILTMSALQGNSPANGQKMSLSLF*WRGFLF
Trigger: GAACAGGAAGCCTCGCCACAAGAATAAGGACAGGCT...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp GACCCTCGGGTGAGTTGGCCTTTTTCGAGCAAGGAGACCATGAAAACATACCTTATTCCCTCTGGTACCTaGTCCATTCCTGCCCATAGC +
Preference number: 5 (lower is better)
Translates to: DPRVSWPFSSKETMKTYLIPSGT*SIPAHS
Trigger: GCTATGGGCAGGAATGGACAAGGTACCAGAGGGAAT...AAGGTATGTTTTCATGGTCTCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp CTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGCCCCAACGCACAATGTTATTATCTaGGATAAGGAGGCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: LQGNSPANGQKMNKCAPTHNVII*DKEAQV
Trigger: GACTTGGGCCTCCTTATCCAAGATAATAACATTGTG...CGTTGGGGCACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAAGTCTTGGCAGTGCTCTaGTCCAGTGGGTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKVLAVL*SSGCSS
Trigger: CGAGGAGCACCCACTGGACAAGAGCACTGCCAAGAC...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp ATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACAAGTGTGAGGGGGATCGATCATaGACAAGAGTCCCACAAAAC +
Preference number: 5 (lower is better)
Translates to: MSALQGNSPANGQKMNKCEGDRS*TRVPQN
Trigger: GTTTTGTGGGACTCTTGTCAATGATCGATCCCCCTC...ACACTTGTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGCCTGCACTCCGGCATTaGGTGACTGCATCTGGCACG +
Preference number: 5 (lower is better)
Translates to: TSVSILHTAFCMKISSCLPALRH*VTASGT
Trigger: CGTGCCAGATGCAGTCACCAAATGCCGGAGTGCAGG...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ATTTTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGATGTCGGCTGCATTTTaGGCTGCATCAGAACCTGCT +
Preference number: 5 (lower is better)
Translates to: ILTMSALQGNSPANGQKMMSAAF*AASEPA
Trigger: AGCAGGTTCTGATGCAGCCAAAAATGCAGCCGACAT...CATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CTTTCCGGGCCTGTCAACATGGAAGTGTCACACATGAATACACCTAAGTTAAAAGAAAGCTCCCAGGGCTaGCATGAGGCCAATGTGCAG +
Preference number: 5 (lower is better)
Translates to: LSGPVNMEVSHMNTPKLKESSQG*HEANVQ
Trigger: CTGCACATTGGCCTCATGCAAGCCCTGGGAGCTTTC...TTTTAACTTAGGTGTATTCATGTGTGACACTTCCATGTTGACAGGCCCGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTGTCTTGGCAGTGCTCTaGTCCAGTGGGTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFVLAVL*SSGCSS
Trigger: CGAGGAGCACCCACTGGACAAGAGCACTGCCAAGAC...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CATGAAAACATACCTTCTCAGGGGATCTGCAGAAATCTTAGGGAGGTCATGGGGCCCACAAAACAGAGGTaGGAGGTCGGAAAGTTCATA +
Preference number: 5 (lower is better)
Translates to: HENIPSQGICRNLREVMGPTKQR*EVGKFI
Trigger: TATGAACTTTCCGACCTCCAACCTCTGTTTTGTGGG...CCCCATGACCTCCCTAAGATTTCTGCAGATCCCCTGAGAAGGTATGTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp CATGAAAACATACCTTCTCAGGGGATCTGCAGAAATCTTAGGGAGGTCATGGGGTCCACTGTTTCACTGTaGGCTGAAATGATCCCCACA +
Preference number: 5 (lower is better)
Translates to: HENIPSQGICRNLREVMGSTVSL*AEMIPT
Trigger: TGTGGGGATCATTTCAGCCAACAGTGAAACAGTGGA...CCCCATGACCTCCCTAAGATTTCTGCAGATCCCCTGAGAAGGTATGTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp GAGCAAGGAGACCATGAAAACATACCTTCTCAGGGGATCTGCAGAAATCTTAGGTGCTCCACAGCAATGTaGAGGCGATGTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: EQGDHENIPSQGICRNLRCSTAM*RRCAMS
Trigger: AGACATTGCACATCGCCTCAACATTGCTGTGGAGCA...CCTAAGATTTCTGCAGATCCCCTGAGAAGGTATGTTTTCATGGTCTCCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGGTCACCACAGCGGCCTaGGCATCCCGTTTGTTAACT +
Preference number: 5 (lower is better)
Translates to: TSVSILHTAFCMKISSCLVTTAA*ASRLLT
Trigger: AGTTAACAAACGGGATGCCAAGGCCGCTGTGGTGAC...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCGTGCGGTCACCCGTGTaGATAACCATGCCGGTGACA +
Preference number: 5 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCVRSPV*ITMPVT
Trigger: TGTCACCGGCATGGTTATCAACACGGGTGACCGCAC...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCGGGTGCTCCTCGCCGTaGATCATGATGGTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCGCSSP*IMMVLH
Trigger: ATGCAGCACCATCATGATCAACGGCGAGGAGCACCC...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS TCA 90 bp AAAACAGAGGTTGGAGGTCGGAAAGTTCATAGCGTCTATGTCAAATaGGTAGGTTTCTGGAAACTCGTCTGCTGGCAGGTAGAGATGACA +
Preference number: 5 (lower is better)
Translates to: KTEVGGRKVHSVYVK*VGFWKLVCWQVEMT
Trigger: TGTCATCTCTACCTGCCAGCAGACGAGTTTCCAGAAACCTACTCATTTGACATAGACGCTATGAACTTTCCGACCTCCAACCTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTCCTTGCCATCCCCCTaGTCTGTTTTCACGATGTCC +
Preference number: 5 (lower is better)
Translates to: SVSILHTAFCMKISSCLNSLPSP*SVFTMS
Trigger: GGACATCGTGAAAACAGACAAGGGGGATGGCAAGGA...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGATGGAGTCCAGGACTaGATACTTCAGGGACACAGC +
Preference number: 5 (lower is better)
Translates to: NISEHPAYSFLHENFLLSDGVQD*ILQGHS
Trigger: GCTGTGTCCCTGAAGTATCAAGTCCTGGACTCCATC...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTTCTTGGCCATCCGTTTaGCTGTCAGCGACAGGGTCA +
Preference number: 5 (lower is better)
Translates to: VSILHTAFCMKISSCLNFSWPSV*LSATGS
Trigger: TGACCCTGTCGCTGACAGCAAAACGGATGGCCAAGA...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TTGACGATGTCTGCACTGCAGGGGAATAGCCCAGCAAACGGTCAGAAGATGAACGGGATTTCAGCTACTTaGCGGTTTCTTTTTCTAATT +
Preference number: 5 (lower is better)
Translates to: LTMSALQGNSPANGQKMNGISAT*RFLFLI
Trigger: AATTAGAAAAAGAAACCGCAAAGTAGCTGAAATCCC...GTTCATCTTCTGACCGTTTGCTGGGCTATTCCCCTGCAGTGCAGACATCGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ATGCCTGGGTTACACAAGACTATTAACATCAAGGAGTTTCAAATACACATAAACACCATGAGGAAGCGCTaGCCGTGGGGGTCATCCATC +
Preference number: 5 (lower is better)
Translates to: MPGLHKTINIKEFQIHINTMRKR*PWGSSI
Trigger: GATGGATGACCCCCACGGCAAGCGCTTCCTCATGGT...GTTTATGTGTATTTGAAACTCCTTGATGTTAATAGTCTTGTGTAACCCAGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCGCTGTGTGGAAGGTCTaGGCAGTGCTCTTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCAVWKV*AVLLSS
Trigger: ACTGGACAAGAGCACTGCCAAGACCTTCCACACAGC...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAGCTGTGTGGAAGGTCTaGGCAGTGCTCTTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: SFKVQNISEHPAYSFLHEAVWKV*AVLLSS
Trigger: ACTGGACAAGAGCACTGCCAAGACCTTCCACACAGC...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGGAGGGGGATCGATCATaGACAAGAGTCCCACAAAAC +
Preference number: 5 (lower is better)
Translates to: TSVSILHTAFCMKISSCLEGDRS*TRVPQN
Trigger: GTTTTGTGGGACTCTTGTCAATGATCGATCCCCCTC...CAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCCTGCACTCCGGCATTaGGTGACTGCATCTGGCACG +
Preference number: 5 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFPALRH*VTASGT
Trigger: CGTGCCAGATGCAGTCACCAAATGCCGGAGTGCAGG...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAGACCCTCGGGTGAGTaGGCCTTTTTCGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SFKVQNISEHPAYSFLHERPSGE*AFFEQG
Trigger: TCCTTGCTCGAAAAAGGCCAACTCACCCGAGGGTCT...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTTCCTTGCCATCCCCCTaGTCTGTTTTCACGATGTCC +
Preference number: 5 (lower is better)
Translates to: VSILHTAFCMKISSCLNFSLPSP*SVFTMS
Trigger: GGACATCGTGAAAACAGACAAGGGGGATGGCAAGGA...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTCAGCCCAAGTACACGTaGTTCAGGGATGCAGACTTG +
Preference number: 5 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFQPKYT*FRDADL
Trigger: CAAGTCTGCATCCCTGAACAACGTGTACTTGGGCTG...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp GAGCAAGGAGACCATGAAAACATACCTTCTCAGGGGATCTGCAGAAATCTTAGGCACAATGTTATTATCTaGGATAAGGAGGCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: EQGDHENIPSQGICRNLRHNVII*DKEAQV
Trigger: GACTTGGGCCTCCTTATCCAAGATAATAACATTGTG...CCTAAGATTTCTGCAGATCCCCTGAGAAGGTATGTTTTCATGGTCTCCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTGCTCCACAGCAATGTaGAGGCGATGTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: SVSILHTAFCMKISSCLNCSTAM*RRCAMS
Trigger: AGACATTGCACATCGCCTCAACATTGCTGTGGAGCA...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCAGCCTGTCCTTATTCTaGTGGCGAGGCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCSLSLF*WRGFLF
Trigger: GAACAGGAAGCCTCGCCACAAGAATAAGGACAGGCT...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTGAAAGCTCCCAGGGCTaGCATGAGGCCAATGTGCAG +
Preference number: 5 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFESSQG*HEANVQ
Trigger: CTGCACATTGGCCTCATGCAAGCCCTGGGAGCTTTC...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATGGGCAGAAAGCCCTCTaGTGCATAGACGGTGAAATA +
Preference number: 5 (lower is better)
Translates to: SVSILHTAFCMKISSCLNGQKAL*CIDGEI
Trigger: TATTTCACCGTCTATGCACAAGAGGGCTTTCTGCCC...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCATTCCCTCTGGTACCTaGTCCATTCCTGCCCATAGC +
Preference number: 5 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCIPSGT*SIPAHS
Trigger: GCTATGGGCAGGAATGGACAAGGTACCAGAGGGAAT...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTATGTCGGCTGCATTTTaGGCTGCATCAGAACCTGCT +
Preference number: 5 (lower is better)
Translates to: VSILHTAFCMKISSCLNFMSAAF*AASEPA
Trigger: AGCAGGTTCTGATGCAGCCAAAAATGCAGCCGACAT...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATACTGACAAAACGTTATaGCTGGAGAGCACCTGGCAA +
Preference number: 5 (lower is better)
Translates to: SVSILHTAFCMKISSCLNTDKTL*LESTWQ
Trigger: TTGCCAGGTGCTCTCCAGCAATAACGTTTTGTCAGT...ATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp AGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTGGTCAAAGACTTGGTTaGAATGGTCCTCACTGGTGT +
Preference number: 5 (lower is better)
Translates to: SEHPAYSFLHENFLLSEFGQRLG*NGPHWC
Trigger: ACACCAGTGAGGACCATTCAAACCAAGTCTTTGACC...AAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGTAACCATAATAACCTaGATCCCTGCACTCCGGCAT +
Preference number: 5 (lower is better)
Translates to: VSILHTAFCMKISSCLNFVTIIT*IPALRH
Trigger: ATGCCGGAGTGCAGGGATCAAGGTTATTATGGTTAC...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCTCCACTGTTTCACTGTaGGCTGAAATGATCCCCACA +
Preference number: 5 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCSTVSL*AEMIPT
Trigger: TGTGGGGATCATTTCAGCCAACAGTGAAACAGTGGA...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp CATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTGACGATGTCTGCATCCCGTTTGTTAACTaGCTCCACAGCAATGTTGAG +
Preference number: 5 (lower is better)
Translates to: HTAFCMKISSCLNFDDVCIPFVN*LHSNVE
Trigger: CTCAACATTGCTGTGGAGCAAGTTAACAAACGGGAT...GCAGACATCGTCAAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp GTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGAATTTTATCCCGTTTGTTAACTaGCTCCACAGCAATGTTGAG +
Preference number: 5 (lower is better)
Translates to: VSILHTAFCMKISSCLNFIPFVN*LHSNVE
Trigger: CTCAACATTGCTGTGGAGCAAGTTAACAAACGGGAT...AAAATTCAGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTGGTCAAAGACTTGGTTaGAATGGTCCTCACTGGTGT +
Preference number: 5 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFGQRLG*NGPHWC
Trigger: ACACCAGTGAGGACCATTCAAACCAAGTCTTTGACC...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp TTGAATTTCAGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCCCACAAAACAGAGGTaGGAGGTCGGAAAGTTCATA +
Preference number: 5 (lower is better)
Translates to: LNFSFKVQNISEHPAYSFPTKQR*EVGKFI
Trigger: TATGAACTTTCCGACCTCCAACCTCTGTTTTGTGGG...AAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACTGAAATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS-3UTR CAA 90 bp ATGCCTGGGTTACACAAGACTATTAACATCAAGGAGTTTCAAATACACATAAACGTAACCATAATAACCTaGATCCCTGCACTCCGGCAT +
Preference number: 5 (lower is better)
Translates to: MPGLHKTINIKEFQIHINVTIIT*IPALRH
Trigger: ATGCCGGAGTGCAGGGATCAAGGTTATTATGGTTAC...GTTTATGTGTATTTGAAACTCCTTGATGTTAATAGTCTTGTGTAACCCAGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp AGTTTTAAAGTGCAAAACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAGCTCTCTACTAGGGTaGAATCCTGGTAAAGAAAGT +
Preference number: 5 (lower is better)
Translates to: SFKVQNISEHPAYSFLHESSLLG*NPGKES
Trigger: ACTTTCTTTACCAGGATTCAACCCTAGTAGAGAGCT...TTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTTTTGCACTTTAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381946.5
CDS-3UTR CAA 90 bp AACATCAGTGAGCATCCTGCATACAGCTTTCTGCATGAAAATTTCCTCTTGTCTGGGATTTCAGCTACTTaGCGGTTTCTTTTTCTAATT +
Preference number: 5 (lower is better)
Translates to: NISEHPAYSFLHENFLLSGISAT*RFLFLI
Trigger: AATTAGAAAAAGAAACCGCAAAGTAGCTGAAATCCC...AGACAAGAGGAAATTTTCATGCAGAAAGCTGTATGCAGGATGCTCACTGATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CCA 72 bp TGCATGCTGGGCTGGTGGCGCCGCGGGCTGCGGGCGTaGAGCGCGGATCCGGGACCGCAGCGGCGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: CMLGWWRRGLRA*SADPGPQRRSA
Trigger: TGCGCTCCGCCGCTGCGGTCCCGGATCCGCGCTCCACGCCCGCAGCCCGCGGCGCCACCAGCCCAGCATGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS GCA 72 bp TGTTGGCGGTGGAGATACCGGCGGCGGCGCGGGCCCTaGACGCACCTCCGCGGCCGATCGCCAGCCGCTGCA +
Preference number: 6 (lower is better)
Translates to: CWRWRYRRRRGP*THLRGRSPAAA
Trigger: TGCAGCGGCTGGCGATCGGCCGCGGAGGTGCGTGCAGGGCCCGCGCCGCCGCCGGTATCTCCACCGCCAACA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS GCA 72 bp GCCCTGCACGCACCTCCGCGGCCGATCGCCAGCCGCTaGACCGGGGAGGTGGCACCAGCCTTAAATGCCGCC +
Preference number: 6 (lower is better)
Translates to: ALHAPPRPIASR*TGEVAPALNAA
Trigger: GGCGGCATTTAAGGCTGGTGCCACCTCCCCGGTGCAGCGGCTGGCGATCGGCCGCGGAGGTGCGTGCAGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CCA 72 bp TGGCTGTGGCAGTGGCAGTGGCTGAGGTGTTGGCGGTaGAGATACCGGCGGCGGCGCGGGCCCTGCACGCAC +
Preference number: 6 (lower is better)
Translates to: WLWQWQWLRCWR*RYRRRRGPCTH
Trigger: GTGCGTGCAGGGCCCGCGCCGCCGCCGGTATCTCCACCGCCAACACCTCAGCCACTGCCACTGCCACAGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CCA 72 bp CCACGGAGTAAATTTCTGGGGTTTTCTGGTGCATGCTaGGCTGGTGGCGCCGCGGGCTGCGGGCGTGGAGCG +
Preference number: 6 (lower is better)
Translates to: PRSKFLGFSGAC*AGGAAGCGRGA
Trigger: CGCTCCACGCCCGCAGCCCGCGGCGCCACCAGCCCAGCATGCACCAGAAAACCCCAGAAATTTACTCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS TCA 72 bp AGCTCCCAGGGCTTGCATGAGGCCAATGTGCAGGTATaGGTACACAGCGAGCGGCTGGTTCACCAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: SSQGLHEANVQV*VHSERLVHQPV
Trigger: GACAGGCTGGTGAACCAGCCGCTCGCTGTGTACTCATACCTGCACATTGGCCTCATGCAAGCCCTGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CCA 72 bp GGCTGTGTGGAAGGTCTTGGCAGTGCTCTTGTCCAGTaGGTGCTCCTCGCCGTTGATCATGATGGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: GCVEGLGSALVQ*VLLAVDHDGAA
Trigger: TGCAGCACCATCATGATCAACGGCGAGGAGCACCCACTGGACAAGAGCACTGCCAAGACCTTCCACACAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CCA 72 bp AGAGCTTCCGCACCTCATCATACACCCAGATCAGGATaGCGTGCGGCACAGCCACAAACCAGTACTGAGCCC +
Preference number: 6 (lower is better)
Translates to: RASAPHHTPRSG*RAAQPQTSTEP
Trigger: GGGCTCAGTACTGGTTTGTGGCTGTGCCGCACGCCATCCTGATCTGGGTGTATGATGAGGTGCGGAAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS GCA 72 bp GTGTGGAAGGTCTTGGCAGTGCTCTTGTCCAGTGGGTaGTCCTCGCCGTTGATCATGATGGTGCTGCATTTC +
Preference number: 6 (lower is better)
Translates to: VWKVLAVLLSSG*SSPLIMMVLHF
Trigger: GAAATGCAGCACCATCATGATCAACGGCGAGGAGCACCCACTGGACAAGAGCACTGCCAAGACCTTCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CAA 72 bp TTGGCAGTGCTCTTGTCCAGTGGGTGCTCCTCGCCGTaGATCATGATGGTGCTGCATTTCTCTAGGATGCGC +
Preference number: 6 (lower is better)
Translates to: LAVLLSSGCSSP*IMMVLHFSRMR
Trigger: GCGCATCCTAGAGAAATGCAGCACCATCATGATCAACGGCGAGGAGCACCCACTGGACAAGAGCACTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CAA 72 bp ACAGCGAGCGGCTGGTTCACCAGCCTGTCCTTATTCTaGTGGCGAGGCTTCCTGTTCATGATGTCACTTTCA +
Preference number: 6 (lower is better)
Translates to: TASGWFTSLSLF*WRGFLFMMSLS
Trigger: TGAAAGTGACATCATGAACAGGAAGCCTCGCCACAAGAATAAGGACAGGCTGGTGAACCAGCCGCTCGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CAA 72 bp CCGCAGGTTAATGAGAGTGCGGGGCAGAAAGCCCTCTaGTGCATAGACGGTGAAATACACAAGGAAAGCTCC +
Preference number: 6 (lower is better)
Translates to: PQVNESAGQKAL*CIDGEIHKESS
Trigger: GGAGCTTTCCTTGTGTATTTCACCGTCTATGCACAAGAGGGCTTTCTGCCCCGCACTCTCATTAACCTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS TCA 72 bp ACGTTGTTCAGGGATGCAGACTTGTCGCTGGAGTACTaGATCCCATATGCAATCCAACAGAGAAAGGCGCCC +
Preference number: 6 (lower is better)
Translates to: TLFRDADLSLEY*IPYAIQQRKAP
Trigger: GGGCGCCTTTCTCTGTTGGATTGCATATGGGATTCAGTACTCCAGCGACAAGTCTGCATCCCTGAACAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS GCA 72 bp CAGGTTAATGAGAGTGCGGGGCAGAAAGCCCTCTTGTaGATAGACGGTGAAATACACAAGGAAAGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: QVNESAGQKALL*IDGEIHKESSQ
Trigger: CTGGGAGCTTTCCTTGTGTATTTCACCGTCTATGCACAAGAGGGCTTTCTGCCCCGCACTCTCATTAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CAA 90 bp ACAGCGGCCTTGGCATCCCGTTTGTTAACTTGCTCCACAGCAATGTaGAGGCGATGTGCAATGTCTTCCACTGTTTCACTGTTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: TAALASRLLTCSTAM*RRCAMSSTVSLLAE
Trigger: TTCAGCCAACAGTGAAACAGTGGAAGACATTGCACATCGCCTCAACATTGCTGTGGAGCAAGTTAACAAACGGGATGCCAAGGCCGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS TCA 72 bp GTTGGAGGTCGGAAAGTTCATAGCGTCTATGTCAAATaGGTAGGTTTCTGGAAACTCGTCTGCTGGCAGGTA +
Preference number: 6 (lower is better)
Translates to: VGGRKVHSVYVK*VGFWKLVCWQV
Trigger: TACCTGCCAGCAGACGAGTTTCCAGAAACCTACTCATTTGACATAGACGCTATGAACTTTCCGACCTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5
CDS CAA 72 bp TTGGCATCCCGTTTGTTAACTTGCTCCACAGCAATGTaGAGGCGATGTGCAATGTCTTCCACTGTTTCACTG +
Preference number: 6 (lower is better)
Translates to: LASRLLTCSTAM*RRCAMSSTVSL
Trigger: CAGTGAAACAGTGGAAGACATTGCACATCGCCTCAACATTGCTGTGGAGCAAGTTAACAAACGGGATGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218548.10
ENST00000381946.5