RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP11C (Homo sapiens)

Ensembl gene IDs: ENSG00000101974

Ensembl transcript IDs: ENST00000327569.7, ENST00000361648.6, ENST00000370557.5, ENST00000422228.1, ENST00000433868.5, ENST00000450801.1, ENST00000460773.5, ENST00000485626.1, ENST00000682941.1

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTaGGGTGGCTCCTTCCCCCTTTCCAAATTGGCCAAGTTTAAGAAA +
Preference number: 1 (lower is better)
Translates to: IHLHRVMALQAEPPF*GGSFPLSKLAKFKK
Trigger: TTTCTTAAACTTGGCCAATTTGGAAAGGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTGCTGAACCACCGTTTTaGGGTGGCTCCTTCCCCCTT +
Preference number: 2 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFAEPPF*GGSFPL
Trigger: AAGGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGC...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR TCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCATGGCTCTACAAGCTaGACCACCGTTTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFHGSTS*TTVLGW
Trigger: CCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTGCTGAACCACCGTTTTaGGGTGGCTCCTTCCCCCTT +
Preference number: 2 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSAEPPF*GGSFPL
Trigger: AAGGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGC...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCATGGCTCTACAAGCTaGACCACCGTTTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSHGSTS*TTVLGW
Trigger: CCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR GCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGAGTGGTTTAGTGTGTTaGGTATCAAGTATCCTGAGA +
Preference number: 2 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPSGLVC*VSSILR
Trigger: TCTCAGGATACTTGATACGCAACACACTAAACCACT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTAGTGGTTTAGTGTGTTaGGTATCAAGTATCCTGAGA +
Preference number: 2 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTSGLVC*VSSILR
Trigger: TCTCAGGATACTTGATACGCAACACACTAAACCACT...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTATCTTCACAGAGTCATaGCTCTACAAGCTGAACCAC +
Preference number: 2 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFIFTES*LYKLNH
Trigger: GTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGAT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCAAGCCTCTCTACTGTaGCTCTCTTGTCTGTATTCA +
Preference number: 2 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFQASLL*LSCLYS
Trigger: TGAATACAGACAAGAGAGCCACAGTAGAGAGGCTTG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGGCTTACACCCATAAGTaGGGTTTAATTCAGAAGAAT +
Preference number: 2 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPAYTHK*GLIQKN
Trigger: ATTCTTCTGAATTAAACCCCACTTATGGGTGTAAGC...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTACTCTCCAATGGTACTaGATTAAACAAGCCTCTCTA +
Preference number: 2 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFTLQWY*IKQASL
Trigger: TAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR TCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTAATGTAATGTGTAGCTaGGACATAACTCTAAATCCC +
Preference number: 2 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFNVMCS*DITLNP
Trigger: GGGATTTAGAGTTATGTCTCAGCTACACATTACATT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR GCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAAGTGGTTTAGTGTGTTaGGTATCAAGTATCCTGAGA +
Preference number: 2 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQASGLVC*VSSILR
Trigger: TCTCAGGATACTTGATACGCAACACACTAAACCACT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR GCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTAGTGGTTTAGTGTGTTaGGTATCAAGTATCCTGAGA +
Preference number: 2 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSSGLVC*VSSILR
Trigger: TCTCAGGATACTTGATACGCAACACACTAAACCACT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTGCTTACACCCATAAGTaGGGTTTAATTCAGAAGAAT +
Preference number: 2 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSAYTHK*GLIQKN
Trigger: ATTCTTCTGAATTAAACCCCACTTATGGGTGTAAGC...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGGCTTACACCCATAAGTaGGGTTTAATTCAGAAGAAT +
Preference number: 2 (lower is better)
Translates to: IILLTLQWYCIKQASLLWAYTHK*GLIQKN
Trigger: ATTCTTCTGAATTAAACCCCACTTATGGGTGTAAGC...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR CCA 72 bp CACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTaGGGTGGCTCCTTCCCCCTTTCCAAATTGGCCAAG +
Preference number: 3 (lower is better)
Translates to: HRVMALQAEPPF*GGSFPLSKLAK
Trigger: CTTGGCCAATTTGGAAAGGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCGAGTGGTTTAGTGTGTaGCGTATCAAGTATCCTGAG +
Preference number: 3 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPEWFSV*RIKYPE
Trigger: CTCAGGATACTTGATACGCAACACACTAAACCACTC...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CAA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTGAGTGGTTTAGTGTGTaGCGTATCAAGTATCCTGAG +
Preference number: 3 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTEWFSV*RIKYPE
Trigger: CTCAGGATACTTGATACGCAACACACTAAACCACTC...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CAA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTTCTACTGTGGCTCTCTaGTCTGTATTCACAGTTCCC +
Preference number: 3 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFSTVAL*SVFTVP
Trigger: GGGAACTGTGAATACAGACAAGAGAGCCACAGTAGA...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
3UTR-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGAGTGGTTTAGTGTGTaGCGTATCAAGTATCCTGAG +
Preference number: 3 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAEWFSV*RIKYPE
Trigger: CTCAGGATACTTGATACGCAACACACTAAACCACTC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCCATCGCGTCGAAGGCTaGCGGGCGCTGAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPHRVEG*RALSWA
Trigger: AGCCCAGCTCAGCGCCCGGCAGCCTTCGACGCGATG...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCCAACCGGCCCGCCCTaGGCCAGCCGACGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSPTGPP*ASRRPD
Trigger: GTCTGGCCGTCGGCTGGCTCAGGGCGGGCCGGTTGG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR CCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCCTCGGAGGGTATCGATaGATTCTGCTGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPLGGYR*ILLYTV
Trigger: CACTGTGTACAGCAGAATCCATCGATACCCTCCGAG...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCTGCCAACAAACACTGTaGGTGTGCCAACTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPCQQTL*VCQLVS
Trigger: AGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCA...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCGGACCATCTGCATACTaGCATGCAGAAATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPGPSAY*HAEIWQ
Trigger: TTGCCAAATTTCTGCATGTCAGTATGCAGATGGTCC...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR TCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCTCAGAGTGTCAATGTTaGTGTGCTGTTCCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPSECQC*CAVPVD
Trigger: GTCTACTGGAACAGCACATCAACATTGACACTCTGA...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGAAGGCTGCCGGGCGCTaGGCTGGGCTCTACCGGGCT +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWKAAGR*AGLYRA
Trigger: AGCCCGGTAGAGCCCAGCTCAGCGCCCGGCAGCCTT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR GCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCTTCACATTCAATTGCTaGTCGGAGGGTATCGATGGA +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPFTFNC*SEGIDG
Trigger: TCCATCGATACCCTCCGAGCAGCAATTGAATGTGAA...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCCTGTTCACATTCAATTaGTGCTCGGAGGGTATCGAT +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPLFTFN*CSEGID
Trigger: ATCGATACCCTCCGAGCAGCAATTGAATGTGAACAG...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCGGCCCAACTGTAGCATaGCATTGCCAGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPGPTVA*HCQKFS
Trigger: TGAAAATTTCTGGCAATGCCATGCTACAGTTGGGCC...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGTCGGGCCAGGGAGCCTaGGTACAGCCAACCGGCCCG +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWSGQGA*VQPTGP
Trigger: CGGGCCGGTTGGCTGTACCCAGGCTCCCTGGCCCGA...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR CCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTCGCGCGGGGGAAGGATaGCGGAGGAGCGCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSRAGEG*RRSARL
Trigger: GAGCCTCGCGCTCCTCCGCCATCCTTCCCCCGCGCG...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTTGCCGGGCGCTGAGCTaGGCTCTACCGGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFCRALS*ALPGCL
Trigger: CAGACAGCCCGGTAGAGCCCAGCTCAGCGCCCGGCA...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR TCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCCCCCAAATCACAAAGTaGTTTATCCACGTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPPQITK*FIHVQN
Trigger: ATTCTGGACGTGGATAAATCACTTTGTGATTTGGGG...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
51% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCCAAGGATCTAGGCCATaGTATCATGTATCATTGCCA +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPQGSRP*YHVSLP
Trigger: TGGCAATGATACATGATATCATGGCCTAGATCCTTG...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTCTAACTCGTCCGCCGTaGCGCGCCGCGCCGTTTCGC +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSLTRPP*RAAPFR
Trigger: GCGAAACGGCGCGGCGCGGCACGGCGGACGAGTTAG...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR GCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGTCCACAAAACACACTaGGGCGTGGGCCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAVHKTH*GVGRRR
Trigger: GCGCCGCCGGCCCACGCCGCAGTGTGTTTTGTGGAC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR CCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCAATGTGTCTTGCAATTaGATTCCCCATCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPNVSCN*IPHQDW
Trigger: CCAGTCTTGATGGGGAATCCAATTGCAAGACACATT...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGTCCCTCTTCCGGGCGTaGTGGAGCCGGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWSLFRA*WSRALR
Trigger: CCTCAGAGCCCGGCTCCACCACGCCCGGAAGAGGGA...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTCGGATCGCCCTTATCTaGCCCCGGCACCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFRIALI*PRHPGP
Trigger: CGGCCCGGGGTGCCGGGGCCAGATAAGGGCGATCCG...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR GCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCTCTCAGAGAGAATGCTaGAGATTATCAAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPSQREC*RLSSNL
Trigger: CAAGTTGCTTGATAATCTGCAGCATTCTCTCTGAGA...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR GCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCAGTGGTTTAGTGTGTTaGGTATCAAGTATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPSGLVC*VSSILR
Trigger: TCTCAGGATACTTGATACGCAACACACTAAACCACT...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCACTCTCCAATGGTACTaGATTAAACAAGCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPTLQWY*IKQASL
Trigger: TAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGT...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCCCACCCTCCTCATCTaGACCGACGAGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSPTLLI*TDEGSP
Trigger: GGGGGAACCCTCGTCGGTGCAGATGAGGAGGGTGGG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR CCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCAACAGGTTCCATCAGTaGTGCAAGATGATAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPNRFHQ*CKMIEE
Trigger: TTCTTCTATCATCTTGCACCACTGATGGAACCTGTT...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTGCTGAACCACCGTTTTaGGGTGGCTCCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTAEPPF*GGSFPL
Trigger: AAGGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGC...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCCTGTTAACTCTCCAATaGTACTGCATTAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPLLTLQ*YCIKQA
Trigger: GGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAG...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTAAACACACTGCGGCGTaGGCCGGCGGCGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFKHTAA*AGGAKR
Trigger: CCGCTTGGCGCCGCCGGCCCACGCCGCAGTGTGTTT...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR TCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCTTGATTTCTACAGTATaGCATAAACACAAGGCACGT +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPLISTV*HKHKAR
Trigger: ACGTGCCTTGTGTTTATGTCATACTGTAGAAATCAA...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCATGTGGAGCCATCTATaGTTAATCCATATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPMWSHL*LIHIPD
Trigger: ATCAGGAATATGGATTAATCATAGATGGCTCCACAT...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCATGGCTCTACAAGCTaGACCACCGTTTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTHGSTS*TTVLGW
Trigger: CCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCAATGTAATGTGTAGCTaGGACATAACTCTAAATCCC +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPNVMCS*DITLNP
Trigger: GGGATTTAGAGTTATGTCTCAGCTACACATTACATT...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCACAGAGTTATTGGGCTaGCTTTTAAATTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPTELLG*LLNSSP
Trigger: TGGTGAAGAATTTAAAAGGCAGCCCAATAACTCTGT...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCGCTTACACCCATAAGTaGGGTTTAATTCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPAYTHK*GLIQKN
Trigger: ATTCTTCTGAATTAAACCCCACTTATGGGTGTAAGC...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTCTCTTCCGGGCGTGGTaGAGCCGGGCTCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFLFRAW*SRALRQ
Trigger: CTGCCTCAGAGCCCGGCTCCACCACGCCCGGAAGAG...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCTCTACCGGGCTGTCTaGGAAGGCGCCGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFLYRAV*EGAVHK
Trigger: TTTGTGGACGGCGCCTTCCCAGACAGCCCGGTAGAG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR GCA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCGATATCATGTATCATTaGCATTCTGAATTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPDIMYH*HSEFEL
Trigger: CAGCTCAAATTCAGAATGGCAATGATACATGATATC...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTTTCAGGCCTGCTGCATaGAGAGCTTCAATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTFRPAA*RASMVS
Trigger: AGAGACCATTGAAGCTCTGCATGCAGCAGGCCTGAA...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGGACTTTCAGGCCTGCTaGATGCAGAGCTTCAATGGT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPDFQAC*MQSFNG
Trigger: ACCATTGAAGCTCTGCATGCAGCAGGCCTGAAAGTC...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCCAGACTTTCAGGCCTaGTGCATGCAGAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPPDFQA*CMQSFN
Trigger: ATTGAAGCTCTGCATGCAGCAGGCCTGAAAGTCTGG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCCAGACTTTCAGGCCTaGTGCATGCAGAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTPDFQA*CMQSFN
Trigger: ATTGAAGCTCTGCATGCAGCAGGCCTGAAAGTCTGG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGATCGCTATTCCTAGCTaGTTGGCGACCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPIAIPS*LATFFA
Trigger: GGCAAAGAAGGTCGCCAAGCAGCTAGGAATAGCGAT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCTCGGAGGGTATCGATaGATTCTGCTGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPLGGYR*ILLYTV
Trigger: CACTGTGTACAGCAGAATCCATCGATACCCTCCGAG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCAGGTCCCAAAGACCTaGCAACAGCCTCAAGACTAT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTQVPKT*QQPQDY
Trigger: ATAGTCTTGAGGCTGTTGCCAGGTCTTTGGGACCTG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGCTGAACCACCGTTTTaGGGTGGCTCCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAAEPPF*GGSFPL
Trigger: AAGGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACATGGCTCTACAAGCTaGACCACCGTTTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAHGSTS*TTVLGW
Trigger: CCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGTGCCAACAAACACTGTaGGTGTGCCAACTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPCQQTL*VCQLVS
Trigger: AGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCA...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCCGATACCCATCCATTaGATTACGTTCCACATGGAC +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPPIPIH*ITFHMD
Trigger: GTCCATGTGGAACGTAATGCAATGGATGGGTATCGG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCCGATACCCATCCATTaGATTACGTTCCACATGGAC +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTPIPIH*ITFHMD
Trigger: GTCCATGTGGAACGTAATGCAATGGATGGGTATCGG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTGCTGAACCACCGTTTTaGGGTGGCTCCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSAEPPF*GGSFPL
Trigger: AAGGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGC...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCTGCTAACCCCACACTaGCCAGTTTTTAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTLLTPH*PVFSSS
Trigger: TGAAGAGCTAAAAACTGGCCAGTGTGGGGTTAGCAG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCCTTATCCCATGAGATaGAGAAGGAGCCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTPYPMR*RRSPRI
Trigger: AATTCTTGGGCTCCTTCTTCATCTCATGGGATAAGG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTAAAGTCCTTATCCCATaGGATGAAGAAGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTKVLIP*DEEGAQ
Trigger: TTGGGCTCCTTCTTCATCTCATGGGATAAGGACTTT...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGTTCTTCATTAAGGTCTaGTGTGTTAACCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPFFIKV*CVNQGS
Trigger: GGAGCCCTGGTTAACACATCAGACCTTAATGAAGAA...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGATGGTCTCTGCAGCTTaGTCTTGTAGCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPMVSAA*SCSLSS
Trigger: TGAAGACAAGCTACAAGATCAAGCTGCAGAGACCAT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGATACAATCGGGGATCTaGGGTCAGAGTGTCAATGTT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPIQSGI*GQSVNV
Trigger: AACATTGACACTCTGACCTCAGATCCCCGATTGTAT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTTTCTGCTGTACACAGTaGAATGGTATCACGTACTGC +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTFCCTQ*NGITYC
Trigger: GCAGTACGTGATACCATTGCACTGTGTACAGCAGAA...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGGGTATCGATGGATTCTaGTGTACACAGTGCAATGGT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPGIDGF*CTQCNG
Trigger: ACCATTGCACTGTGTACAGCAGAATCCATCGATACC...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTGGTATCGATGGATTCTaGTGTACACAGTGCAATGGT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTGIDGF*CTQCNG
Trigger: ACCATTGCACTGTGTACAGCAGAATCCATCGATACC...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTTTCAGGCCTGCTGCATaGAGAGCTTCAATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFFRPAA*RASMVS
Trigger: AGAGACCATTGAAGCTCTGCATGCAGCAGGCCTGAA...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTGACTTTCAGGCCTGCTaGATGCAGAGCTTCAATGGT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFDFQAC*MQSFNG
Trigger: ACCATTGAAGCTCTGCATGCAGCAGGCCTGAAAGTC...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCCGACAGCAGAGCACTaGAGTACACTTCATACATAT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTPTAEH*STLHTY
Trigger: ATATGTATGAAGTGTACTGCAGTGCTCTGCTGTCGG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTATCGCTATTCCTAGCTaGTTGGCGACCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFIAIPS*LATFFA
Trigger: GGCAAAGAAGGTCGCCAAGCAGCTAGGAATAGCGAT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCAGGTCCCAAAGACCTaGCAACAGCCTCAAGACTAT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFQVPKT*QQPQDY
Trigger: ATAGTCTTGAGGCTGTTGCCAGGTCTTTGGGACCTG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCATGATTTTGCACTCTaGGAAAAACTGCCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPHDFAL*EKLPSL
Trigger: CAGACTCGGCAGTTTTTCCCAGAGTGCAAAATCATG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCATGCAGAGCTTCAATaGTCTCTGCAGCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPHAELQ*SLQLDL
Trigger: AAGATCAAGCTGCAGAGACCATTGAAGCTCTGCATG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCTAAGAGCTCAGTGTTaGTCTGGAAAAGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSLRAQC*SGKGGR
Trigger: CCTGCCGCCTTTTCCAGACCAACACTGAGCTCTTAG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCTAAGAGCTCAGTGTTaGTCTGGAAAAGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWLRAQC*SGKGGR
Trigger: CCTGCCGCCTTTTCCAGACCAACACTGAGCTCTTAG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTACCATTCTGACAATCTaGGCTTTCTGTAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTTILTI*AFCNGA
Trigger: GGCACCATTACAGAAAGCCCAGATTGTCAGAATGGT...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCTATTCCTAGCTGCTTaGCGACCTTCTTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTLFLAA*RPSLPL
Trigger: TAAAGGCAAAGAAGGTCGCCAAGCAGCTAGGAATAG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTATCTTCACAGAGTCATaGCTCTACAAGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTIFTES*LYKLNH
Trigger: GTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGAT...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGATCTTCACAGAGTCATaGCTCTACAAGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPIFTES*LYKLNH
Trigger: GTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGAT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCAAGCCTCTCTACTGTaGCTCTCTTGTCTGTATTCA +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTQASLL*LSCLYS
Trigger: TGAATACAGACAAGAGAGCCACAGTAGAGAGGCTTG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCAAGCCTCTCTACTGTaGCTCTCTTGTCTGTATTCA +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPQASLL*LSCLYS
Trigger: TGAATACAGACAAGAGAGCCACAGTAGAGAGGCTTG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCAAGGATCTAGGCCATaGTATCATGTATCATTGCCA +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTQGSRP*YHVSLP
Trigger: TGGCAATGATACATGATATCATGGCCTAGATCCTTG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCAAACACTGTGCGTGTaGCAACTCGTTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFQTLCV*QLVSLL
Trigger: GAGAAGAGAAACGAGTTGGCACACGCACAGTGTTTG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCCGAAACTGGATGATTaGCAACAAACACTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFPKLDD*QQTLCV
Trigger: CACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCAATCCTCATATCCCTaGTTGATGGCTGTAACAGTT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTQSSYP*LMAVTV
Trigger: AACTGTTACAGCCATCAAGCAGGGATATGAGGATTG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCCAGACTTTCAGGCCTaGTGCATGCAGAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWPDFQA*CMQSFN
Trigger: ATTGAAGCTCTGCATGCAGCAGGCCTGAAAGTCTGG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCTTGGCGACCTTCTTTaGCTATTCCCACATGGGATT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFLGDLL*LFPHGI
Trigger: AATCCCATGTGGGAATAGGCAAAGAAGGTCGCCAAG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTGGTAACTGGGCTAGTTaGTGTGTCTACTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSGNWAS*CVYCDL
Trigger: CAGGTCACAGTAGACACACCAACTAGCCCAGTTACC...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGAATGTGTCTTGCAATTaGATTCCCCATCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPNVSCN*IPHQDW
Trigger: CCAGTCTTGATGGGGAATCCAATTGCAAGACACATT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTAATGTGTCTTGCAATTaGATTCCCCATCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTNVSCN*IPHQDW
Trigger: CCAGTCTTGATGGGGAATCCAATTGCAAGACACATT...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCTCGGAGGGTATCGATaGATTCTGCTGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSLGGYR*ILLYTV
Trigger: CACTGTGTACAGCAGAATCCATCGATACCCTCCGAG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACAGGTCCCAAAGACCTaGCAACAGCCTCAAGACTAT +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAQVPKT*QQPQDY
Trigger: ATAGTCTTGAGGCTGTTGCCAGGTCTTTGGGACCTG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCTGCTAACCCCACACTaGCCAGTTTTTAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFLLTPH*PVFSSS
Trigger: TGAAGAGCTAAAAACTGGCCAGTGTGGGGTTAGCAG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTGGACCATCTGCATACTaGCATGCAGAAATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFGPSAY*HAEIWQ
Trigger: TTGCCAAATTTCTGCATGTCAGTATGCAGATGGTCC...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR TCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGAAACAGTGCTTTTGTTaGCTTCATTGTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPKQCFC*LHCQLC
Trigger: ACAGAGCTGACAATGAAGTCAACAAAAGCACTGTTT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTAAAGTCCTTATCCCATaGGATGAAGAAGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFKVLIP*DEEGAQ
Trigger: TTGGGCTCCTTCTTCATCTCATGGGATAAGGACTTT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCTGGAGCAATTTCTTTaGAGGCTACACAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWLEQFL*RLHRVS
Trigger: GGACACTCTGTGTAGCCTTCAAAGAAATTGCTCCAG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCTGGAGCAATTTCTTTaGAGGCTACACAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSLEQFL*RLHRVS
Trigger: GGACACTCTGTGTAGCCTTCAAAGAAATTGCTCCAG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTAATTCTTCACCATTCTaGCAATCTGGGCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTNSSPF*QSGLSV
Trigger: TACAGAAAGCCCAGATTGTCAGAATGGTGAAGAATT...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTATACAGTGGCTGTTGTaGGAATCCACAGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFIQWLL*ESTEEL
Trigger: CAGTTCTTCTGTGGATTCTCACAACAGCCACTGTAT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGTAAAAGAAGAGGTCTaGCTGAAGGTCTGGCGGATA +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAVKEEV*LKVWRI
Trigger: TATCCGCCAGACCTTCAGTCAGACCTCTTCTTTTAC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000433868.5
CDS-3UTR GCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACAAACACTGTGCGTGTaGCAACTCGTTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAQTLCV*QLVSLL
Trigger: GAGAAGAGAAACGAGTTGGCACACGCACAGTGTTTG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGTGCCAACAAACACTGTaGGTGTGCCAACTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWCQQTL*VCQLVS
Trigger: AGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCA...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCCGAAACTGGATGATTaGCAACAAACACTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSPKLDD*QQTLCV
Trigger: CACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTAAAAACTGCCGAGTCTaGTCCTTTACAAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTKNCRV*SFTKEK
Trigger: CTTCTCTTTTGTAAAGGAGCAGACTCGGCAGTTTTT...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCCGATACCCATCCATTaGATTACGTTCCACATGGAC +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWPIPIH*ITFHMD
Trigger: GTCCATGTGGAACGTAATGCAATGGATGGGTATCGG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTTTCAGGCCTGCTGCATaGAGAGCTTCAATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSFRPAA*RASMVS
Trigger: AGAGACCATTGAAGCTCTGCATGCAGCAGGCCTGAA...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTATCGCTATTCCTAGCTaGTTGGCGACCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSIAIPS*LATFFA
Trigger: GGCAAAGAAGGTCGCCAAGCAGCTAGGAATAGCGAT...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGACTCTCCAATGGTACTaGATTAAACAAGCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPTLQWY*IKQASL
Trigger: TAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTACTCTCCAATGGTACTaGATTAAACAAGCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTTLQWY*IKQASL
Trigger: TAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGT...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTGGTAACTGGGCTAGTTaGTGTGTCTACTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSGNWAS*CVYCDL
Trigger: CAGGTCACAGTAGACACACCAACTAGCCCAGTTACC...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCATGCAGAGCTTCAATaGTCTCTGCAGCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFHAELQ*SLQLDL
Trigger: AAGATCAAGCTGCAGAGACCATTGAAGCTCTGCATG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTGGCCCAACTGTAGCATaGCATTGCCAGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFGPTVA*HCQKFS
Trigger: TGAAAATTTCTGGCAATGCCATGCTACAGTTGGGCC...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR CCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCTGTTAACTCTCCAATaGTACTGCATTAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPLLTLQ*YCIKQA
Trigger: GGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCAAGATTCGGATTCCTaGCACTTCTTCTTCTTACAT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTQDSDS*HFFFLH
Trigger: ATGTAAGAAGAAGAAGTGCCAGGAATCCGAATCTTG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTTTGCCTATTCCCACATaGGATTCCAAGATCATACTA +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTLPIPT*DSKIIL
Trigger: TAGTATGATCTTGGAATCCCATGTGGGAATAGGCAA...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTGTTTCCGAAACTGGATaGTTGCCAACAAACACTGTG +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSVSETG*LPTNTV
Trigger: CACAGTGTTTGTTGGCAATCATCCAGTTTCGGAAAC...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTTCTGCATTTCTACTGTaGCGTACATGGAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSSAFLL*RTWRQE
Trigger: TTCCTGTCTCCATGTACGTCACAGTAGAAATGCAGA...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGTCTGCATTTCTACTGTaGCGTACATGGAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWSAFLL*RTWRQE
Trigger: TTCCTGTCTCCATGTACGTCACAGTAGAAATGCAGA...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCCTTATCCCATGAGATaGAGAAGGAGCCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWPYPMR*RRSPRI
Trigger: AATTCTTGGGCTCCTTCTTCATCTCATGGGATAAGG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCATTCTTCATTAAGGTCTaGTGTGTTAACCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAFFIKV*CVNQGS
Trigger: GGAGCCCTGGTTAACACATCAGACCTTAATGAAGAA...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTTTCTTCATTAAGGTCTaGTGTGTTAACCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSFFIKV*CVNQGS
Trigger: GGAGCCCTGGTTAACACATCAGACCTTAATGAAGAA...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGAAAGTTCCATCAGTTTaGGATAATCCATCAACCTCT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPKVPSV*DNPSTS
Trigger: AGAGGTTGATGGATTATCTCAAACTGATGGAACTTT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTATGGTCTCTGCAGCTTaGTCTTGTAGCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSMVSAA*SCSLSS
Trigger: TGAAGACAAGCTACAAGATCAAGCTGCAGAGACCAT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAATGGTCTCTGCAGCTTaGTCTTGTAGCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAMVSAA*SCSLSS
Trigger: TGAAGACAAGCTACAAGATCAAGCTGCAGAGACCAT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTATACAGTGGCTGTTGTaGGAATCCACAGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSIQWLL*ESTEEL
Trigger: CAGTTCTTCTGTGGATTCTCACAACAGCCACTGTAT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTTCAGAGTGTCAATGTTaGTGTGCTGTTCCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSSECQC*CAVPVD
Trigger: GTCTACTGGAACAGCACATCAACATTGACACTCTGA...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTATACAATCGGGGATCTaGGGTCAGAGTGTCAATGTT +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSIQSGI*GQSVNV
Trigger: AACATTGACACTCTGACCTCAGATCCCCGATTGTAT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCCCCAAATCACAAAGTaGTTTATCCACGTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFPQITK*FIHVQN
Trigger: ATTCTGGACGTGGATAAATCACTTTGTGATTTGGGG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTAGAGATGGGACCATCTaGATACTGACATGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFRDGTI*ILTCRN
Trigger: ATTTCTGCATGTCAGTATGCAGATGGTCCCATCTCT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCAATCCTCATATCCCTaGTTGATGGCTGTAACAGTT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFQSSYP*LMAVTV
Trigger: AACTGTTACAGCCATCAAGCAGGGATATGAGGATTG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTTTCTGCTGTACACAGTaGAATGGTATCACGTACTGC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSFCCTQ*NGITYC
Trigger: GCAGTACGTGATACCATTGCACTGTGTACAGCAGAA...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCATTCTGCTGTACACAGTaGAATGGTATCACGTACTGC +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAFCCTQ*NGITYC
Trigger: GCAGTACGTGATACCATTGCACTGTGTACAGCAGAA...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCATTCACATTCAATTGCTaGTCGGAGGGTATCGATGGA +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAFTFNC*SEGIDG
Trigger: TCCATCGATACCCTCCGAGCAGCAATTGAATGTGAA...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCCGACAGCAGAGCACTaGAGTACACTTCATACATAT +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSPTAEH*STLHTY
Trigger: ATATGTATGAAGTGTACTGCAGTGCTCTGCTGTCGG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACCGACAGCAGAGCACTaGAGTACACTTCATACATAT +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAPTAEH*STLHTY
Trigger: ATATGTATGAAGTGTACTGCAGTGCTCTGCTGTCGG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTGGTAACTGGGCTAGTTaGTGTGTCTACTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFGNWAS*CVYCDL
Trigger: CAGGTCACAGTAGACACACCAACTAGCCCAGTTACC...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACATGATTTTGCACTCTaGGAAAAACTGCCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAHDFAL*EKLPSL
Trigger: CAGACTCGGCAGTTTTTCCCAGAGTGCAAAATCATG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCATGATTTTGCACTCTaGGAAAAACTGCCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWHDFAL*EKLPSL
Trigger: CAGACTCGGCAGTTTTTCCCAGAGTGCAAAATCATG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCATGCAGAGCTTCAATaGTCTCTGCAGCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWHAELQ*SLQLDL
Trigger: AAGATCAAGCTGCAGAGACCATTGAAGCTCTGCATG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTACCATTCTGACAATCTaGGCTTTCTGTAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSTILTI*AFCNGA
Trigger: GGCACCATTACAGAAAGCCCAGATTGTCAGAATGGT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAACCATTCTGACAATCTaGGCTTTCTGTAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQATILTI*AFCNGA
Trigger: GGCACCATTACAGAAAGCCCAGATTGTCAGAATGGT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTATACCTATTCCCACATaGGATTCCAAGATCATACTA +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTIPIPT*DSKIIL
Trigger: TAGTATGATCTTGGAATCCCATGTGGGAATAGGTAT...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACTATTCCTAGCTGCTTaGCGACCTTCTTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQALFLAA*RPSLPL
Trigger: TAAAGGCAAAGAAGGTCGCCAAGCAGCTAGGAATAG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTGGCCCAACTGTAGCATaGCATTGCCAGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSGPTVA*HCQKFS
Trigger: TGAAAATTTCTGGCAATGCCATGCTACAGTTGGGCC...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGGCCCAACTGTAGCATaGCATTGCCAGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAGPTVA*HCQKFS
Trigger: TGAAAATTTCTGGCAATGCCATGCTACAGTTGGGCC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGATCTTCACAGAGTCATaGCTCTACAAGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWIFTES*LYKLNH
Trigger: GTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGAT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAATCTTCACAGAGTCATaGCTCTACAAGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAIFTES*LYKLNH
Trigger: GTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGAT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACAAGCCTCTCTACTGTaGCTCTCTTGTCTGTATTCA +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAQASLL*LSCLYS
Trigger: TGAATACAGACAAGAGAGCCACAGTAGAGAGGCTTG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCAAGCCTCTCTACTGTaGCTCTCTTGTCTGTATTCA +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSQASLL*LSCLYS
Trigger: TGAATACAGACAAGAGAGCCACAGTAGAGAGGCTTG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTCTGCTAACCCCACACTaGCCAGTTTTTAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSLLTPH*PVFSSS
Trigger: TGAAGAGCTAAAAACTGGCCAGTGTGGGGTTAGCAG...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCTATTCCTAGCTGCTTaGCGACCTTCTTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWLFLAA*RPSLPI
Trigger: AATAGGCAAAGAAGGTCGCCAAGCAGCTAGGAATAG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR TCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGGTCTCTCGCTCTTTCTaGGTCTTTTGGTTATACCAA +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWVSRSF*VFWLYQ
Trigger: TTGGTATAACCAAAAGACTCAGAAAGAGCGAGAGAC...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCAAGGATCTAGGCCATaGTATCATGTATCATTGCCA +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSQGSRP*YHVSLP
Trigger: TGGCAATGATACATGATATCATGGCCTAGATCCTTG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCAAGGATCTAGGCCATaGTATCATGTATCATTGCCA +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWQGSRP*YHVSLP
Trigger: TGGCAATGATACATGATATCATGGCCTAGATCCTTG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTCCGAAACTGGATGATTaGCAACAAACACTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFPKLDD*QQTLCV
Trigger: CACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGG...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGAATGGTATCACGTACTaGATAATGTGTCTTGCAATT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPNGITY*IMCLAI
Trigger: AATTGCAAGACACATTATGCAGTACGTGATACCATT...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTCTGTTCACATTCAATTaGTGCTCGGAGGGTATCGAT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSLFTFN*CSEGID
Trigger: ATCGATACCCTCCGAGCAGCAATTGAATGTGAACAG...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTAACAGGTTCCATCAGTaGTGCAAGATGATAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFNRFHQ*CKMIEE
Trigger: TTCTTCTATCATCTTGCACCACTGATGGAACCTGTT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTCTAAGGTCAGTTACATaGTTTAGAGTTAGACCATTT +
Preference number: 4 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTLRSVT*FRVRPF
Trigger: AAATGGTCTAACTCTAAACCATGTAACTGACCTTAG...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCTAAGGTCAGTTACATaGTTTAGAGTTAGACCATTT +
Preference number: 4 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPLRSVT*FRVRPF
Trigger: AAATGGTCTAACTCTAAACCATGTAACTGACCTTAG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTCTGTTAACTCTCCAATaGTACTGCATTAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFLLTLQ*YCIKQA
Trigger: GGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAG...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTGTTTCCGAAACTGGATaGTTGCCAACAAACACTGTG +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFVSETG*LPTNTV
Trigger: CACAGTGTTTGTTGGCAATCATCCAGTTTCGGAAAC...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTGTCTCTCGCTCTTTCTaGGTCTTTTGGTTATACCAA +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSVSRSF*VFWLYQ
Trigger: TTGGTATAACCAAAAGACTCAGAAAGAGCGAGAGAC...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTTCTGCATTTCTACTGTaGCGTACATGGAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFSAFLL*RTWRQE
Trigger: TTCCTGTCTCCATGTACGTCACAGTAGAAATGCAGA...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTCCTTATCCCATGAGATaGAGAAGGAGCCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFPYPMR*RRSPRI
Trigger: AATTCTTGGGCTCCTTCTTCATCTCATGGGATAAGG...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGAATTCTTCACCATTCTaGCAATCTGGGCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWNSSPF*QSGLSV
Trigger: TACAGAAAGCCCAGATTGTCAGAATGGTGAAGAATT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAAATTCTTCACCATTCTaGCAATCTGGGCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQANSSPF*QSGLSV
Trigger: TACAGAAAGCCCAGATTGTCAGAATGGTGAAGAATT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTTCAGAGTGTCAATGTTaGTGTGCTGTTCCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFSECQC*CAVPVD
Trigger: GTCTACTGGAACAGCACATCAACATTGACACTCTGA...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTCCCCAAATCACAAAGTaGTTTATCCACGTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSPQITK*FIHVQN
Trigger: ATTCTGGACGTGGATAAATCACTTTGTGATTTGGGG...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTTACTTCCACTTTCTCTaGGGTTGTAAAGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSYFHFL*GCKVRL
Trigger: AAGCCTGACTTTACAACCTCAGAGAAAGTGGAAGTA...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTAAATCTCAGAGAGAATaGTGCAGATTATCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFKSQRE*CRLSSN
Trigger: GTTGCTTGATAATCTGCAGCATTCTCTCTGAGATTT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR GCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTCAATCCTCATATCCCTaGTTGATGGCTGTAACAGTT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSQSSYP*LMAVTV
Trigger: AACTGTTACAGCCATCAAGCAGGGATATGAGGATTG...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTCTGTTCACATTCAATTaGTGCTCGGAGGGTATCGAT +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFLFTFN*CSEGID
Trigger: ATCGATACCCTCCGAGCAGCAATTGAATGTGAACAG...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTACAGAGTTATTGGGCTaGCTTTTAAATTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFTELLG*LLNSSP
Trigger: TGGTGAAGAATTTAAAAGGCAGCCCAATAACTCTGT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGAGTGGTTTAGTGTGTTaGGTATCAAGTATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWSGLVC*VSSILR
Trigger: TCTCAGGATACTTGATACGCAACACACTAAACCACT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGACTCTCCAATGGTACTaGATTAAACAAGCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWTLQWY*IKQASL
Trigger: TAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAAATTTGGCAACACAATaGCAGCTAAATCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQANLATQ*QLNLRE
Trigger: CTCTCTGAGATTTAGCTGCCATTGTGTTGCCAAATT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTAATTTGGCAACACAATaGCAGCTAAATCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSNLATQ*QLNLRE
Trigger: CTCTCTGAGATTTAGCTGCCATTGTGTTGCCAAATT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCTGTACACAGTGCAATaGTATCACGTACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSLYTVQ*YHVLHN
Trigger: ATTATGCAGTACGTGATACCATTGCACTGTGTACAG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACTGTACACAGTGCAATaGTATCACGTACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQALYTVQ*YHVLHN
Trigger: ATTATGCAGTACGTGATACCATTGCACTGTGTACAG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTTGTCTTCAACTGCAGTaGCTCCAATTAAATTCATGT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFCLQLQ*LQLNSC
Trigger: ACATGAATTTAATTGGAGCCACTGCAGTTGAAGACA...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTGCTTACACCCATAAGTaGGGTTTAATTCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFAYTHK*GLIQKN
Trigger: ATTCTTCTGAATTAAACCCCACTTATGGGTGTAAGC...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTCAAGCCTCTCTACTGTaGCTCTCTTGTCTGTATTCA +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFQASLL*LSCLYS
Trigger: TGAATACAGACAAGAGAGCCACAGTAGAGAGGCTTG...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACTGTTAACTCTCCAATaGTACTGCATTAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQALLTLQ*YCIKQA
Trigger: GGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCTGTTAACTCTCCAATaGTACTGCATTAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSLLTLQ*YCIKQA
Trigger: GGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACAAGATTCGGATTCCTaGCACTTCTTCTTCTTACAT +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAQDSDS*HFFFLH
Trigger: ATGTAAGAAGAAGAAGTGCCAGGAATCCGAATCTTG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTTTAAGTGATGAACCCTaGCACTTCTTCTTCTTACAT +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFLSDEP*HFFFLH
Trigger: ATGTAAGAAGAAGAAGTGCCAGGGTTCATCACTTAA...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450801.1
CDS-3UTR TCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTGTCTCTCGCTCTTTCTaGGTCTTTTGGTTATACCAA +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFVSRSF*VFWLYQ
Trigger: TTGGTATAACCAAAAGACTCAGAAAGAGCGAGAGAC...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTCTATGCAGCATTCAATaGATTCCATGCTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSLCSIQ*IPCCFQ
Trigger: CTGAAAACAGCATGGAATTCATTGAATGCTGCATAG...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAATGTGGAGCCATCTATaGTTAATCCATATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAMWSHL*LIHIPD
Trigger: ATCAGGAATATGGATTAATCATAGATGGCTCCACAT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTAATGTAATGTGTAGCTaGGACATAACTCTAAATCCC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSNVMCS*DITLNP
Trigger: GGGATTTAGAGTTATGTCTCAGCTACACATTACATT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTAAATCTCAGAGAGAATaGTGCAGATTATCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSKSQRE*CRLSSN
Trigger: GTTGCTTGATAATCTGCAGCATTCTCTCTGAGATTT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR GCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTAAAAACTGCCGAGTCTaGTCCTTTACAAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSKNCRV*SFTKEK
Trigger: CTTCTCTTTTGTAAAGGAGCAGACTCGGCAGTTTTT...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAACAGAGTTATTGGGCTaGCTTTTAAATTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQATELLG*LLNSSP
Trigger: TGGTGAAGAATTTAAAAGGCAGCCCAATAACTCTGT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTACTGTAGCATGGCATTaGCAGAAATTTTCATATACA +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFTVAWH*QKFSYT
Trigger: TGTATATGAAAATTTCTGGCAATGCCATGCTACAGT...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR GCA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTGATATCATGTATCATTaGCATTCTGAATTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFDIMYH*HSEFEL
Trigger: CAGCTCAAATTCAGAATGGCAATGATACATGATATC...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTCTGTACACAGTGCAATaGTATCACGTACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSLYTVQ*YHVLHN
Trigger: ATTATGCAGTACGTGATACCATTGCACTGTGTACAG...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGAGGTTCATCATTGTATaGGGTACTTTGCCAAACATA +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWRFIIV*GTLPNI
Trigger: TATGTTTGGCAAAGTACCCCATACAATGATGAACCT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTAGGTTCATCATTGTATaGGGTACTTTGCCAAACATA +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSRFIIV*GTLPNI
Trigger: TATGTTTGGCAAAGTACCCCATACAATGATGAACCT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGACACCTTTATATTTGTaGCCATCTATGCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWTPLYL*PSMQHS
Trigger: TGAATGCTGCATAGATGGCCACAAATATAAAGGTGT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTACACCTTTATATTTGTaGCCATCTATGCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSTPLYL*PSMQHS
Trigger: TGAATGCTGCATAGATGGCCACAAATATAAAGGTGT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTAGCTCAGATTTCTCCTaGCACTTCTTCTTCTTACAT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSSSDFS*HFFFLH
Trigger: ATGTAAGAAGAAGAAGTGCCAGGAGAAATCTGAGCT...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000433868.5
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGCTTACACCCATAAGTaGGGTTTAATTCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAAYTHK*GLIQKN
Trigger: ATTCTTCTGAATTAAACCCCACTTATGGGTGTAAGC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTCTATGCAGCATTCAATaGATTCCATGCTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFLCSIQ*IPCCFQ
Trigger: CTGAAAACAGCATGGAATTCATTGAATGCTGCATAG...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTTTGATTTCTACAGTATaGCATAAACACAAGGCACGT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSLISTV*HKHKAR
Trigger: ACGTGCCTTGTGTTTATGTCATACTGTAGAAATCAA...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTAATGTAATGTGTAGCTaGGACATAACTCTAAATCCC +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSNVMCS*DITLNP
Trigger: GGGATTTAGAGTTATGTCTCAGCTACACATTACATT...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTTCTCAGAGAGAATGCTaGAGATTATCAAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFSQREC*RLSSNL
Trigger: CAAGTTGCTTGATAATCTGCAGCATTCTCTCTGAGA...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR GCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGAATGGTATCACGTACTaGATAATGTGTCTTGCAATT +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWNGITY*IMCLAI
Trigger: AATTGCAAGACACATTATGCAGTACGTGATACCATT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTAATGGTATCACGTACTaGATAATGTGTCTTGCAATT +
Preference number: 4 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSNGITY*IMCLAI
Trigger: AATTGCAAGACACATTATGCAGTACGTGATACCATT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCATTGTATGGGGTACTTTaGCAAACATACTTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQALYGVL*QTYFRV
Trigger: TACTCTAAAGTATGTTTGGCAAAGTACCCCATACAA...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGACTGTAGCATGGCATTaGCAGAAATTTTCATATACA +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWTVAWH*QKFSYT
Trigger: TGTATATGAAAATTTCTGGCAATGCCATGCTACAGT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTAACAGGTTCCATCAGTaGTGCAAGATGATAGAAGAA +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFNRFHQ*CKMIEE
Trigger: TTCTTCTATCATCTTGCACCACTGATGGAACCTGTT...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGCATTACGTTCCACATaGACTTTAGTTAACTCAATT +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAALRST*TLVNSI
Trigger: AATTGAGTTAACTAAAGTCCATGTGGAACGTAATGC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTTGTCTTCAACTGCAGTaGCTCCAATTAAATTCATGT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSCLQLQ*LQLNSC
Trigger: ACATGAATTTAATTGGAGCCACTGCAGTTGAAGACA...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTAGCTCAGATTTCTCCTaGCACTTCTTCTTCTTACAT +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFSSDFS*HFFFLH
Trigger: ATGTAAGAAGAAGAAGTGCCAGGAGAAATCTGAGCT...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000433868.5
CDS-3UTR CCA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACTAAGGTCAGTTACATaGTTTAGAGTTAGACCATTT +
Preference number: 4 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQALRSVT*FRVRPF
Trigger: AAATGGTCTAACTCTAAACCATGTAACTGACCTTAG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCTAAGGTCAGTTACATaGTTTAGAGTTAGACCATTT +
Preference number: 4 (lower is better)
Translates to: IILLTLQWYCIKQASLLWLRSVT*FRVRPF
Trigger: AAATGGTCTAACTCTAAACCATGTAACTGACCTTAG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR TCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTAAAGTTCCATCAGTTTaGGATAATCCATCAACCTCT +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFKVPSV*DNPSTS
Trigger: AGAGGTTGATGGATTATCTCAAACTGATGGAACTTT...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTTTGATTTCTACAGTATaGCATAAACACAAGGCACGT +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFLISTV*HKHKAR
Trigger: ACGTGCCTTGTGTTTATGTCATACTGTAGAAATCAA...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR TCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTATGTGGAGCCATCTATaGTTAATCCATATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFMWSHL*LIHIPD
Trigger: ATCAGGAATATGGATTAATCATAGATGGCTCCACAT...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTTTGTATGGGGTACTTTaGCAAACATACTTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSLYGVL*QTYFRV
Trigger: TACTCTAAAGTATGTTTGGCAAAGTACCCCATACAA...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTACTGTAGCATGGCATTaGCAGAAATTTTCATATACA +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSTVAWH*QKFSYT
Trigger: TGTATATGAAAATTTCTGGCAATGCCATGCTACAGT...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR CCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTGCATTACGTTCCACATaGACTTTAGTTAACTCAATT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSALRST*TLVNSI
Trigger: AATTGAGTTAACTAAAGTCCATGTGGAACGTAATGC...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTTGTCTTCAACTGCAGTaGCTCCAATTAAATTCATGT +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFCLQLQ*LQLNSC
Trigger: ACATGAATTTAATTGGAGCCACTGCAGTTGAAGACA...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTATACCTATTCCCACATaGGATTCCAAGATCATACTA +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFIPIPT*DSKIIL
Trigger: TAGTATGATCTTGGAATCCCATGTGGGAATAGGTAT...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CCA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTCTAAGGTCAGTTACATaGTTTAGAGTTAGACCATTT +
Preference number: 4 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSLRSVT*FRVRPF
Trigger: AAATGGTCTAACTCTAAACCATGTAACTGACCTTAG...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR GCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTTTGTATGGGGTACTTTaGCAAACATACTTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFLYGVL*QTYFRV
Trigger: TACTCTAAAGTATGTTTGGCAAAGTACCCCATACAA...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR GCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTACTGTAGCATGGCATTaGCAGAAATTTTCATATACA +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFTVAWH*QKFSYT
Trigger: TGTATATGAAAATTTCTGGCAATGCCATGCTACAGT...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR GCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTGATATCATGTATCATTaGCATTCTGAATTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFDIMYH*HSEFEL
Trigger: CAGCTCAAATTCAGAATGGCAATGATACATGATATC...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CCA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTGCATTACGTTCCACATaGACTTTAGTTAACTCAATT +
Preference number: 4 (lower is better)
Translates to: HMGKQKGLTILSDALILFALRST*TLVNSI
Trigger: AATTGAGTTAACTAAAGTCCATGTGGAACGTAATGC...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS GCA 90 bp TCGGGAGCCACAGCCTCCCTCGCCCCGGCCCTAACTCGTCCGCCGTaGCGCGCCGCGCCGTTTCGCTCGCAGCCCCTCCTCGGTCCGCGG +
Preference number: 5 (lower is better)
Translates to: SGATASLAPALTRPP*RAAPFRSQPLLGPR
Trigger: CCGCGGACCGAGGAGGGGCTGCGAGCGAAACGGCGCGGCGCGGCACGGCGGACGAGTTAGGGCCGGGGCGAGGGAGGCTGTGGCTCCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS CCA 90 bp ACCGGGCTGTCTGGGAAGGCGCCGTCCACAAAACACACTGCGGCGTaGGCCGGCGGCGCCAAGCGGAGCAGCGAGGCGGGCGGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: TGLSGKAPSTKHTAA*AGGAKRSSEAGGRA
Trigger: GGCCCGGCCGCCCGCCTCGCTGCTCCGCTTGGCGCCGCCGGCCCACGCCGCAGTGTGTTTTGTGGACGGCGCCTTCCCAGACAGCCCGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS TCA 90 bp CCGCACTCGGGCCAGGGAGCCTGGGTACAGCCAACCGGCCCGCCCTaGGCCAGCCGACGGCCAGACTCCCTCTTCCGGGCGTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PHSGQGAWVQPTGPP*ASRRPDSLFRAWWS
Trigger: GCTCCACCACGCCCGGAAGAGGGAGTCTGGCCGTCGGCTGGCTCAGGGCGGGCCGGTTGGCTGTACCCAGGCTCCCTGGCCCGAGTGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS GCA 90 bp GGGCTCTACCGGGCTGTCTGGGAAGGCGCCGTCCACAAAACACACTaGGGCGTGGGCCGGCGGCGCCAAGCGGAGCAGCGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: GLYRAVWEGAVHKTH*GVGRRRQAEQRGGR
Trigger: CCGCCCGCCTCGCTGCTCCGCTTGGCGCCGCCGGCCCACGCCGCAGTGTGTTTTGTGGACGGCGCCTTCCCAGACAGCCCGGTAGAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS TCA 90 bp CGATTCAAGCTCCGGCGGAACATCGCGTCGAAGGCTGCCGGGCGCTaGGCTGGGCTCTACCGGGCTGTCTGGGAAGGCGCCGTCCACAAA +
Preference number: 5 (lower is better)
Translates to: RFKLRRNIASKAAGR*AGLYRAVWEGAVHK
Trigger: TTTGTGGACGGCGCCTTCCCAGACAGCCCGGTAGAGCCCAGCTCAGCGCCCGGCAGCCTTCGACGCGATGTTCCGCCGGAGCTTGAATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS CCA 90 bp CAAGCTCCGGCGGAACATCGCGTCGAAGGCTGCCGGGCGCTGAGCTaGGCTCTACCGGGCTGTCTGGGAAGGCGCCGTCCACAAAACACA +
Preference number: 5 (lower is better)
Translates to: QAPAEHRVEGCRALS*ALPGCLGRRRPQNT
Trigger: TGTGTTTTGTGGACGGCGCCTTCCCAGACAGCCCGGTAGAGCCCAGCTCAGCGCCCGGCAGCCTTCGACGCGATGTTCCGCCGGAGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS GCA 90 bp AGCACAAAAACGATTCAAGCTCCGGCGGAACATCGCGTCGAAGGCTaGCGGGCGCTGAGCTGGGCTCTACCGGGCTGTCTGGGAAGGCGC +
Preference number: 5 (lower is better)
Translates to: STKTIQAPAEHRVEG*RALSWALPGCLGRR
Trigger: GCGCCTTCCCAGACAGCCCGGTAGAGCCCAGCTCAGCGCCCGGCAGCCTTCGACGCGATGTTCCGCCGGAGCTTGAATCGTTTTTGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCTCTAAGAGCTCAGTGTaGGTCTGGAAAAGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPSKSSV*VWKRRQ
Trigger: CTGCCGCCTTTTCCAGACCAACACTGAGCTCTTAGA...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCGCTTGGCGACCTTCTTaGCCTATTCCCACATGGGAT +
Preference number: 5 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPAWRPS*PIPTWD
Trigger: ATCCCATGTGGGAATAGGCAAAGAAGGTCGCCAAGC...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCTCTGGAGCAATTTCTTaGAAGGCTACACAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPSGAIS*KATQSV
Trigger: GACACTCTGTGTAGCCTTCAAAGAAATTGCTCCAGA...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCGTCAGAGTGTCAATGTaGATGTGCTGTTCCAGTAGA +
Preference number: 5 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPVRVSM*MCCSSR
Trigger: TCTACTGGAACAGCACATCAACATTGACACTCTGAC...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS GCA 90 bp CTTCTGTTTCCGAAACTGGATGATTGCCAACAAACACTGTGCGTGTaGCAACTCGTTTCTCTTCTCCAGCACACTCAGAGGCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LLFPKLDDCQQTLCV*QLVSLLQHTQRLEG
Trigger: TCCCTCCAGCCTCTGAGTGTGCTGGAGAAGAGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGGAAACAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCTCCTCATATCCCTGCTaGATGGCTGTAACAGTTATA +
Preference number: 5 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPSSYPC*MAVTVI
Trigger: TATAACTGTTACAGCCATCAAGCAGGGATATGAGGA...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCTTTGTAGAGGTCAGGTaGAGGCTGTTCACATTCAAT +
Preference number: 5 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPFVEVR*RLFTFN
Trigger: ATTGAATGTGAACAGCCTCAACCTGACCTCTACAAA...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCCTCTTTCTGAGTCTTTaGGTTATACCAAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPLFLSL*VIPRFI
Trigger: GATGAACCTTGGTATAACCAAAAGACTCAGAAAGAG...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCAAGTATGTCTCCTTCTaGAGTCTTCACAATTACACT +
Preference number: 5 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPKYVSF*SLHNYT
Trigger: AGTGTAATTGTGAAGACTCAAGAAGGAGACATACTT...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTTGGGGTGGCTCCTTCCCCCAACTGTAGCATGGCATaGCCAGAAATTTTCATATAC +
Preference number: 5 (lower is better)
Translates to: TESWLYKLNHRFGVAPSPNCSMA*PEIFIY
Trigger: GTATATGAAAATTTCTGGCAATGCCATGCTACAGTT...GGGGGAAGGAGCCACCCCAAAACGGTGGTTCAGCTTGTAGAGCCATGACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS GCA 90 bp CCCAACAAATTTGTAGAGGTCAGGTTGAGGCTGTTCACATTCAATTaGTGCTCGGAGGGTATCGATGGATTCTGCTGTACACAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: PNKFVEVRLRLFTFN*CSEGIDGFCCTQCN
Trigger: ATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAATTGAATGTGAACAGCCTCAACCTGACCTCTACAAATTTGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS GCA 90 bp CTTCTGTTTCCGAAACTGGATGATTGCCAACAAACACTGTGCGTGTaGCAACTCGTTTCTCTTCTCCAGCACAAAAACGATTCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLFPKLDDCQQTLCV*QLVSLLQHKNDSSS
Trigger: GGAGCTTGAATCGTTTTTGTGCTGGAGAAGAGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGGAAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS CCA 90 bp TTGCTGCTCGGAGGGTATCGATGGATTCTGCTGTACACAGTGCAATaGTATCACGTACTGCATAATGTGTCTTGCAATTGGATTCCCCAT +
Preference number: 5 (lower is better)
Translates to: LLLGGYRWILLYTVQ*YHVLHNVSCNWIPH
Trigger: ATGGGGAATCCAATTGCAAGACACATTATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS CCA 90 bp CAGGTTGAGGCTGTTCACATTCAATTGCTGCTCGGAGGGTATCGATaGATTCTGCTGTACACAGTGCAATGGTATCACGTACTGCATAAT +
Preference number: 5 (lower is better)
Translates to: QVEAVHIQLLLGGYR*ILLYTVQWYHVLHN
Trigger: ATTATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAATTGAATGTGAACAGCCTCAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS-3UTR CAA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTGCTGTTCACATTCAATaGCTGCTCGGAGGGTATCGA +
Preference number: 5 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTAVHIQ*LLGGYR
Trigger: TCGATACCCTCCGAGCAGCAATTGAATGTGAACAGC...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTGCTATTCCTAGCTGCTaGGCGACCTTCTTTGCCTAT +
Preference number: 5 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTAIPSC*ATFFAY
Trigger: ATAGGCAAAGAAGGTCGCCAAGCAGCTAGGAATAGC...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS GCA 90 bp AGGCTGTTCACATTCAATTGCTGCTCGGAGGGTATCGATGGATTCTaGTGTACACAGTGCAATGGTATCACGTACTGCATAATGTGTCTT +
Preference number: 5 (lower is better)
Translates to: RLFTFNCCSEGIDGF*CTQCNGITYCIMCL
Trigger: AAGACACATTATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAATTGAATGTGAACAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS GCA 90 bp AACAAATTTGTAGAGGTCAGGTTGAGGCTGTTCACATTCAATTGCTaGTCGGAGGGTATCGATGGATTCTGCTGTACACAGTGCAATGGT +
Preference number: 5 (lower is better)
Translates to: NKFVEVRLRLFTFNC*SEGIDGFCCTQCNG
Trigger: ACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAATTGAATGTGAACAGCCTCAACCTGACCTCTACAAATTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS-3UTR CAA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGTCCGATACCCATCCATaGCATTACGTTCCACATGGA +
Preference number: 5 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPSDTHP*HYVPHG
Trigger: TCCATGTGGAACGTAATGCAATGGATGGGTATCGGA...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTGCTTGGCGACCTTCTTaGCCTTTAATACCTATTCCC +
Preference number: 5 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTAWRPS*PLIPIP
Trigger: GGGAATAGGTATTAAAGGCAAAGAAGGTCGCCAAGC...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CAA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGTCTACTGTGGCTCTCTaGTCTGTATTCACAGTTCCC +
Preference number: 5 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPSTVAL*SVFTVP
Trigger: GGGAACTGTGAATACAGACAAGAGAGCCACAGTAGA...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS TCA 90 bp AAATTTTCATATACAATCGGGGATCTGAGGTCAGAGTGTCAATGTTaGTGTGCTGTTCCAGTAGACTATAGGCCAGGATGGGCAAGGATG +
Preference number: 5 (lower is better)
Translates to: KFSYTIGDLRSECQC*CAVPVDYRPGWARM
Trigger: CATCCTTGCCCATCCTGGCCTATAGTCTACTGGAACAGCACATCAACATTGACACTCTGACCTCAGATCCCCGATTGTATATGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000460773.5
ENST00000682941.1
CDS GCA 90 bp TTCAATTGCTGCTCGGAGGGTATCGATGGATTCTGCTGTACACAGTaGAATGGTATCACGTACTGCATAATGTGTCTTGCAATTGGATTC +
Preference number: 5 (lower is better)
Translates to: FNCCSEGIDGFCCTQ*NGITYCIMCLAIGF
Trigger: GAATCCAATTGCAAGACACATTATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS-3UTR CAA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCTGACATGCAGAAATTaGGCAACACAATGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPLTCRN*ATQWQL
Trigger: TAGCTGCCATTGTGTTGCCAAATTTCTGCATGTCAG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCATCTAAGAGCTCAGTGTaGGTCTGGAAAAGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQASKSSV*VWKRRQ
Trigger: CTGCCGCCTTTTCCAGACCAACACTGAGCTCTTAGA...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGGTCAGAGTGTCAATGTaGATGTGCTGTTCCAGTAGA +
Preference number: 5 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPVRVSM*MCCSSR
Trigger: TCTACTGGAACAGCACATCAACATTGACACTCTGAC...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGGAGTGGTTTAGTGTGTaGCGTATCAAGTATCCTGAG +
Preference number: 5 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPEWFSV*RIKYPE
Trigger: CTCAGGATACTTGATACGCAACACACTAAACCACTC...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS GCA 90 bp AAAATCTTTGTGCAATGTAAGCTTCTGTTTCCGAAACTGGATGATTaGCAACAAACACTGTGCGTGTGCCAACTCGTTTCTCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: KIFVQCKLLFPKLDD*QQTLCVCQLVSLLQ
Trigger: CTGGAGAAGAGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGGAAACAGAAGCTTACATTGCACAAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000485626.1
ENST00000682941.1
CDS CCA 90 bp GATGGGACCATCTGCATACTGACATGCAGAAATTTGGCAACACAATaGCAGCTAAATCTCAGAGAGAATGCTGCAGATTATCAAGCAACT +
Preference number: 5 (lower is better)
Translates to: DGTICILTCRNLATQ*QLNLRENAADYQAT
Trigger: AGTTGCTTGATAATCTGCAGCATTCTCTCTGAGATTTAGCTGCCATTGTGTTGCCAAATTTCTGCATGTCAGTATGCAGATGGTCCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGCTGTTCACATTCAATaGCTGCTCGGAGGGTATCGA +
Preference number: 5 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAAVHIQ*LLGGYR
Trigger: TCGATACCCTCCGAGCAGCAATTGAATGTGAACAGC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGTTTGTAGAGGTCAGGTaGAGGCTGTTCACATTCAAT +
Preference number: 5 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPFVEVR*RLFTFN
Trigger: ATTGAATGTGAACAGCCTCAACCTGACCTCTACAAA...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTTCCGATACCCATCCATaGCATTACGTTCCACATGGA +
Preference number: 5 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFSDTHP*HYVPHG
Trigger: TCCATGTGGAACGTAATGCAATGGATGGGTATCGGA...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTGCTTGGCGACCTTCTTaGCCTTTAATACCTATTCCC +
Preference number: 5 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFAWRPS*PLIPIP
Trigger: GGGAATAGGTATTAAAGGCAAAGAAGGTCGCCAAGC...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGCTATTCCTAGCTGCTaGGCGACCTTCTTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAAIPSC*ATFFAF
Trigger: AAAGGCAAAGAAGGTCGCCAAGCAGCTAGGAATAGC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CAA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTGCTATTCCTAGCTGCTaGGCGACCTTCTTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSAIPSC*ATFFAF
Trigger: AAAGGCAAAGAAGGTCGCCAAGCAGCTAGGAATAGC...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CAA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTGCTGTTCACATTCAATaGCTGCTCGGAGGGTATCGA +
Preference number: 5 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSAVHIQ*LLGGYR
Trigger: TCGATACCCTCCGAGCAGCAATTGAATGTGAACAGC...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACTTTTGTTTTCAGCAGCTTACCTCAAATACGGGCTACCAGAACACAGCACACTGTTACACCTTTATATTaGTGGCCATCTATGCAGCAT +
Preference number: 5 (lower is better)
Translates to: TFVFSSLPQIRATRTQHTVTPLY*WPSMQH
Trigger: ATGCTGCATAGATGGCCACAAATATAAAGGTGTAAC...AGTGTGCTGTGTTCTGGTAGCCCGTATTTGAGGTAAGCTGCTGAAAACAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCATCCGATACCCATCCATaGCATTACGTTCCACATGGA +
Preference number: 5 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQASDTHP*HYVPHG
Trigger: TCCATGTGGAACGTAATGCAATGGATGGGTATCGGA...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTTCTAAGAGCTCAGTGTaGGTCTGGAAAAGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: HMGKQKGLTILSDALILFSKSSV*VWKRRQ
Trigger: CTGCCGCCTTTTCCAGACCAACACTGAGCTCTTAGA...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGCTATCGACAGAGTTATaGGGCTGCCTTTTAAATTCT +
Preference number: 5 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPLSTEL*GCLLNS
Trigger: AGAATTTAAAAGGCAGCCCAATAACTCTGTCGATAG...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTGAGTGGTTTAGTGTGTaGCGTATCAAGTATCCTGAG +
Preference number: 5 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFEWFSV*RIKYPE
Trigger: CTCAGGATACTTGATACGCAACACACTAAACCACTC...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CAA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTTCTACTGTGGCTCTCTaGTCTGTATTCACAGTTCCC +
Preference number: 5 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSSTVAL*SVFTVP
Trigger: GGGAACTGTGAATACAGACAAGAGAGCCACAGTAGA...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CAA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGTCTACTGTGGCTCTCTaGTCTGTATTCACAGTTCCC +
Preference number: 5 (lower is better)
Translates to: IILLTLQWYCIKQASLLWSTVAL*SVFTVP
Trigger: GGGAACTGTGAATACAGACAAGAGAGCCACAGTAGA...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS CCA 90 bp ATTATCACAAAATCTTTGTGCAATGTAAGCTTCTGTTTCCGAAACTaGATGATTGCCAACAAACACTGTGCGTGTGCCAACTCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: IITKSLCNVSFCFRN*MIANKHCACANSFL
Trigger: GAGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGGAAACAGAAGCTTACATTGCACAAAGATTTTGTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000485626.1
ENST00000682941.1
CDS-3UTR CAA 90 bp TTAAGAGACAACATTCATCTTCACAGAGTCATGGCTCTACAAGCTGAACCACCGGTGCATACTGCAGCTTaGGTCAGTAAGATAAATAAA +
Preference number: 5 (lower is better)
Translates to: LRDNIHLHRVMALQAEPPVHTAA*VSKINK
Trigger: TTTATTTATCTTACTGACCAAAGCTGCAGTATGCAC...CGGTGGTTCAGCTTGTAGAGCCATGACTCTGTGAAGATGAATGTTGTCTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp GTCCCTCTCAAGGATCTAGGCCATGATATCATGTATCATTGCCATTCTGAATTTTACCAAGGTTCATCATaGTATGGGGTACTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: VPLKDLGHDIMYHCHSEFYQGSS*YGVLCQ
Trigger: TTGGCAAAGTACCCCATACAATGATGAACCTTGGTA...AAATTCAGAATGGCAATGATACATGATATCATGGCCTAGATCCTTGAGAGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGTCTGGAGCAATTTCTTaGAAGGCTACACAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: IILLTLQWYCIKQASLLWSGAIS*KATQSV
Trigger: GACACTCTGTGTAGCCTTCAAAGAAATTGCTCCAGA...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGGAGTGGTTTAGTGTGTaGCGTATCAAGTATCCTGAG +
Preference number: 5 (lower is better)
Translates to: IILLTLQWYCIKQASLLWEWFSV*RIKYPE
Trigger: CTCAGGATACTTGATACGCAACACACTAAACCACTC...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CAA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTTCTACTGTGGCTCTCTaGTCTGTATTCACAGTTCCC +
Preference number: 5 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSSTVAL*SVFTVP
Trigger: GGGAACTGTGAATACAGACAAGAGAGCCACAGTAGA...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CAA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTTCCTCATATCCCTGCTaGATGGCTGTAACAGTTATA +
Preference number: 5 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSSSYPC*MAVTVI
Trigger: TATAACTGTTACAGCCATCAAGCAGGGATATGAGGA...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGTCCTCATATCCCTGCTaGATGGCTGTAACAGTTATA +
Preference number: 5 (lower is better)
Translates to: IILLTLQWYCIKQASLLWSSYPC*MAVTVI
Trigger: TATAACTGTTACAGCCATCAAGCAGGGATATGAGGA...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCATTTGTAGAGGTCAGGTaGAGGCTGTTCACATTCAAT +
Preference number: 5 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAFVEVR*RLFTFN
Trigger: ATTGAATGTGAACAGCCTCAACCTGACCTCTACAAA...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTTACCAAGGTTCATCATaGTATGGGGTACTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSYQGSS*YGVLCQ
Trigger: TTGGCAAAGTACCCCATACAATGATGAACCTTGGTA...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTTCTACTGTGGCTCTCTaGTCTGTATTCACAGTTCCC +
Preference number: 5 (lower is better)
Translates to: HMGKQKGLTILSDALILFSTVAL*SVFTVP
Trigger: GGGAACTGTGAATACAGACAAGAGAGCCACAGTAGA...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS TCA 90 bp TCTGTAGCTCCATCAACAGCATCGTTTGTTTTGATTTCTACAGTATaGCATAAACACAAGGCACGTAGAAACAGCTCTTCTCGATTCTTA +
Preference number: 5 (lower is better)
Translates to: SVAPSTASFVLISTV*HKHKARRNSSSRFL
Trigger: TAAGAATCGAGAAGAGCTGTTTCTACGTGCCTTGTGTTTATGTCATACTGTAGAAATCAAAACAAACGATGCTGTTGATGGAGCTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000422228.1
ENST00000460773.5
ENST00000682941.1
CDS-3UTR CAA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTCTGACATGCAGAAATTaGGCAACACAATGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: HMGKQKGLTILSDALILFLTCRN*ATQWQL
Trigger: TAGCTGCCATTGTGTTGCCAAATTTCTGCATGTCAG...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS-3UTR CAA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGCTCTTTCTGAGTCTTTaGGTTATACCAAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: IILLTLQWYCIKQASLLWLFLSL*VIPRFI
Trigger: GATGAACCTTGGTATAACCAAAAGACTCAGAAAGAG...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAGTTACACCTTTATATTaGTGGCCATCTATGCAGCAT +
Preference number: 5 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAVTPLY*WPSMQH
Trigger: ATGCTGCATAGATGGCCACAAATATAAAGGTGTAAC...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGGTTACACCTTTATATTaGTGGCCATCTATGCAGCAT +
Preference number: 5 (lower is better)
Translates to: IILLTLQWYCIKQASLLWVTPLY*WPSMQH
Trigger: ATGCTGCATAGATGGCCACAAATATAAAGGTGTAAC...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTTCTGGAGCAATTTCTTaGAAGGCTACACAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: HMGKQKGLTILSDALILFSGAIS*KATQSV
Trigger: GACACTCTGTGTAGCCTTCAAAGAAATTGCTCCAGA...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTCTATCGACAGAGTTATaGGGCTGCCTTTTAAATTCT +
Preference number: 5 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSLSTEL*GCLLNS
Trigger: AGAATTTAAAAGGCAGCCCAATAACTCTGTCGATAG...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCACTATCGACAGAGTTATaGGGCTGCCTTTTAAATTCT +
Preference number: 5 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQALSTEL*GCLLNS
Trigger: AGAATTTAAAAGGCAGCCCAATAACTCTGTCGATAG...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTGAGTGGTTTAGTGTGTaGCGTATCAAGTATCCTGAG +
Preference number: 5 (lower is better)
Translates to: HMGKQKGLTILSDALILFEWFSV*RIKYPE
Trigger: CTCAGGATACTTGATACGCAACACACTAAACCACTC...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000433868.5
ENST00000450801.1
CDS-3UTR CAA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGGTGCATACTGCAGCTTaGGTCAGTAAGATAAATAAA +
Preference number: 5 (lower is better)
Translates to: IILLTLQWYCIKQASLLWVHTAA*VSKINK
Trigger: TTTATTTATCTTACTGACCAAAGCTGCAGTATGCAC...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAAAGTATGTCTCCTTCTaGAGTCTTCACAATTACACT +
Preference number: 5 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQAKYVSF*SLHNYT
Trigger: AGTGTAATTGTGAAGACTCAAGAAGGAGACATACTT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ACTTTACTAAGGTCAGTTACATGGTTTAGAGTTAGACCATTTCCCTGTCCAAGTAAGTATGTCTCCTTCTaGAGTCTTCACAATTACACT +
Preference number: 5 (lower is better)
Translates to: TLLRSVTWFRVRPFPCPSKYVSF*SLHNYT
Trigger: AGTGTAATTGTGAAGACTCAAGAAGGAGACATACTT...ACTTGGACAGGGAAATGGTCTAACTCTAAACCATGTAACTGACCTTAGTAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp ATTATTCTGTTAACTCTCCAATGGTACTGCATTAAACAAGCCTCTCTACTGTGGAACTGTAGCATGGCATaGCCAGAAATTTTCATATAC +
Preference number: 5 (lower is better)
Translates to: IILLTLQWYCIKQASLLWNCSMA*PEIFIY
Trigger: GTATATGAAAATTTCTGGCAATGCCATGCTACAGTT...CCACAGTAGAGAGGCTTGTTTAATGCAGTACCATTGGAGAGTTAACAGAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR CAA 90 bp CATTTAGGAGGAATGAGAAATGTGATCCAAATAGTCTATTTCTTCTGCCAGGCAAACTGTAGCATGGCATaGCCAGAAATTTTCATATAC +
Preference number: 5 (lower is better)
Translates to: HLGGMRNVIQIVYFFCQANCSMA*PEIFIY
Trigger: GTATATGAAAATTTCTGGCAATGCCATGCTACAGTT...TGCCTGGCAGAAGAAATAGACTATTTGGATCACATTTCTCATTCCTCCTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000450801.1
CDS-3UTR CAA 90 bp GAGTGGTTTAGTGTGTTGCGTATCAAGTATCCTGAGATGATAACTTTTTGTAGTGTGCATACTGCAGCTTaGGTCAGTAAGATAAATAAA +
Preference number: 5 (lower is better)
Translates to: EWFSVLRIKYPEMITFCSVHTAA*VSKINK
Trigger: TTTATTTATCTTACTGACCAAAGCTGCAGTATGCAC...ACTACAAAAAGTTATCATCTCAGGATACTTGATACGCAACACACTAAACCACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS-3UTR CAA 90 bp CACATGGGTAAACAGAAGGGATTAACTATTCTGTCTGATGCATTGATACTATTTCTCTTTCTGAGTCTTTaGGTTATACCAAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: HMGKQKGLTILSDALILFLFLSL*VIPRFI
Trigger: GATGAACCTTGGTATAACCAAAAGACTCAGAAAGAG...AAATAGTATCAATGCATCAGACAGAATAGTTAATCCCTTCTGTTTACCCATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
CDS GCA 72 bp TCTCTCCGCCAGCGCCGGGCTCGGCACCCCGCGGGATaGGCTCTTCCCCGACGCGGCACCACCGCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: SLRQRRARHPAG*ALPRRGTTARL
Trigger: GAGGCGGGCGGTGGTGCCGCGTCGGGGAAGAGCGCATCCCGCGGGGTGCCGAGCCCGGCGCTGGCGGAGAGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS GCA 72 bp ACAGCCTCCCTCGCCCCGGCCCTAACTCGTCCGCCGTaGCGCGCCGCGCCGTTTCGCTCGCAGCCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: TASLAPALTRPP*RAAPFRSQPLL
Trigger: GAGGAGGGGCTGCGAGCGAAACGGCGCGGCGCGGCACGGCGGACGAGTTAGGGCCGGGGCGAGGGAGGCTGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS TCA 72 bp GGCCAGGGAGCCTGGGTACAGCCAACCGGCCCGCCCTaGGCCAGCCGACGGCCAGACTCCCTCTTCCGGGCG +
Preference number: 6 (lower is better)
Translates to: GQGAWVQPTGPP*ASRRPDSLFRA
Trigger: CGCCCGGAAGAGGGAGTCTGGCCGTCGGCTGGCTCAGGGCGGGCCGGTTGGCTGTACCCAGGCTCCCTGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS TCA 72 bp CTCCGGCGGAACATCGCGTCGAAGGCTGCCGGGCGCTaGGCTGGGCTCTACCGGGCTGTCTGGGAAGGCGCC +
Preference number: 6 (lower is better)
Translates to: LRRNIASKAAGR*AGLYRAVWEGA
Trigger: GGCGCCTTCCCAGACAGCCCGGTAGAGCCCAGCTCAGCGCCCGGCAGCCTTCGACGCGATGTTCCGCCGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS GCA 72 bp CGGGCTGTCTGGGAAGGCGCCGTCCACAAAACACACTaGGGCGTGGGCCGGCGGCGCCAAGCGGAGCAGCGA +
Preference number: 6 (lower is better)
Translates to: RAVWEGAVHKTH*GVGRRRQAEQR
Trigger: TCGCTGCTCCGCTTGGCGCCGCCGGCCCACGCCGCAGTGTGTTTTGTGGACGGCGCCTTCCCAGACAGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS CCA 72 bp GCCAGCCGACGGCCAGACTCCCTCTTCCGGGCGTGGTaGAGCCGGGCTCTGAGGCAGGGCACCGTGAAGACC +
Preference number: 6 (lower is better)
Translates to: ASRRPDSLFRAW*SRALRQGTVKT
Trigger: GGTCTTCACGGTGCCCTGCCTCAGAGCCCGGCTCCACCACGCCCGGAAGAGGGAGTCTGGCCGTCGGCTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS CCA 72 bp GCGGAACATCGCGTCGAAGGCTGCCGGGCGCTGAGCTaGGCTCTACCGGGCTGTCTGGGAAGGCGCCGTCCA +
Preference number: 6 (lower is better)
Translates to: AEHRVEGCRALS*ALPGCLGRRRP
Trigger: TGGACGGCGCCTTCCCAGACAGCCCGGTAGAGCCCAGCTCAGCGCCCGGCAGCCTTCGACGCGATGTTCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS GCA 72 bp ACGATTCAAGCTCCGGCGGAACATCGCGTCGAAGGCTaGCGGGCGCTGAGCTGGGCTCTACCGGGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: TIQAPAEHRVEG*RALSWALPGCL
Trigger: CAGACAGCCCGGTAGAGCCCAGCTCAGCGCCCGGCAGCCTTCGACGCGATGTTCCGCCGGAGCTTGAATCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS GCA 72 bp CCGAAACTGGATGATTGCCAACAAACACTGTGCGTGTaGCAACTCGTTTCTCTTCTCCAGCACACTCAGAGG +
Preference number: 6 (lower is better)
Translates to: PKLDDCQQTLCV*QLVSLLQHTQR
Trigger: CCTCTGAGTGTGCTGGAGAAGAGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS TCA 72 bp GCCTGCCCACCTAAGCCTTCTTACTTCCACTTTCTCTaGGGTTGTAAAGTCAGGCTTTGTGTCGTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: ACPPKPSYFHFL*GCKVRLCVVAA
Trigger: AGCAGCAACGACACAAAGCCTGACTTTACAACCTCAGAGAAAGTGGAAGTAAGAAGGCTTAGGTGGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370557.5
CDS GCA 72 bp GTAGAGGTCAGGTTGAGGCTGTTCACATTCAATTGCTaGTCGGAGGGTATCGATGGATTCTGCTGTACACAG +
Preference number: 6 (lower is better)
Translates to: VEVRLRLFTFNC*SEGIDGFCCTQ
Trigger: CTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAATTGAATGTGAACAGCCTCAACCTGACCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS GCA 72 bp CCGAAACTGGATGATTGCCAACAAACACTGTGCGTGTaGCAACTCGTTTCTCTTCTCCAGCACAATTGTACG +
Preference number: 6 (lower is better)
Translates to: PKLDDCQQTLCV*QLVSLLQHNCT
Trigger: CGTACAATTGTGCTGGAGAAGAGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485626.1
CDS CAA 90 bp GCCCAACAAATTTGTAGAGGTCAGGTTGAGGCTGTTCACATTCAATaGCTGCTCGGAGGGTATCGATGGATTCTGCTGTACACAGTGCAA +
Preference number: 6 (lower is better)
Translates to: AQQICRGQVEAVHIQ*LLGGYRWILLYTVQ
Trigger: TTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAATTGAATGTGAACAGCCTCAACCTGACCTCTACAAATTTGTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS TCA 72 bp TATACAATCGGGGATCTGAGGTCAGAGTGTCAATGTTaGTGTGCTGTTCCAGTAGACTATAGGCCAGGATGG +
Preference number: 6 (lower is better)
Translates to: YTIGDLRSECQC*CAVPVDYRPGW
Trigger: CCATCCTGGCCTATAGTCTACTGGAACAGCACATCAACATTGACACTCTGACCTCAGATCCCCGATTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000460773.5
ENST00000682941.1
CDS GCA 72 bp TGCTCGGAGGGTATCGATGGATTCTGCTGTACACAGTaGAATGGTATCACGTACTGCATAATGTGTCTTGCA +
Preference number: 6 (lower is better)
Translates to: CSEGIDGFCCTQ*NGITYCIMCLA
Trigger: TGCAAGACACATTATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS GCA 72 bp CCGAAACTGGATGATTGCCAACAAACACTGTGCGTGTaGCAACTCGTTTCTCTTCTCCAGCACAAAAACGAT +
Preference number: 6 (lower is better)
Translates to: PKLDDCQQTLCV*QLVSLLQHKND
Trigger: ATCGTTTTTGTGCTGGAGAAGAGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000682941.1
CDS CCA 72 bp GCTGTTCACATTCAATTGCTGCTCGGAGGGTATCGATaGATTCTGCTGTACACAGTGCAATGGTATCACGTA +
Preference number: 6 (lower is better)
Translates to: AVHIQLLLGGYR*ILLYTVQWYHV
Trigger: TACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAATTGAATGTGAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS GCA 72 bp GTGCAATGTAAGCTTCTGTTTCCGAAACTGGATGATTaGCAACAAACACTGTGCGTGTGCCAACTCGTTTCT +
Preference number: 6 (lower is better)
Translates to: VQCKLLFPKLDD*QQTLCVCQLVS
Trigger: AGAAACGAGTTGGCACACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGGAAACAGAAGCTTACATTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000485626.1
ENST00000682941.1
CDS GCA 72 bp ACATTCAATTGCTGCTCGGAGGGTATCGATGGATTCTaGTGTACACAGTGCAATGGTATCACGTACTGCATA +
Preference number: 6 (lower is better)
Translates to: TFNCCSEGIDGF*CTQCNGITYCI
Trigger: TATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCAGCAATTGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS CCA 72 bp GGAGGGTATCGATGGATTCTGCTGTACACAGTGCAATaGTATCACGTACTGCATAATGTGTCTTGCAATTGG +
Preference number: 6 (lower is better)
Translates to: GGYRWILLYTVQ*YHVLHNVSCNW
Trigger: CCAATTGCAAGACACATTATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS CCA 72 bp CAATGGTTTTTGTGGTTAGTTCTAAGAGCTCAGTGTTaGTCTGGAAAAGGCGGCAGGCATAGCATGTGGATT +
Preference number: 6 (lower is better)
Translates to: QWFLWLVLRAQC*SGKGGRHSMWI
Trigger: AATCCACATGCTATGCCTGCCGCCTTTTCCAGACCAACACTGAGCTCTTAGAACTAACCACAAAAACCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000460773.5
ENST00000682941.1
CDS TCA 72 bp GGCATTGCCAGAAATTTTCATATACAATCGGGGATCTaGGGTCAGAGTGTCAATGTTGATGTGCTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: GIARNFHIQSGI*GQSVNVDVLFQ
Trigger: CTGGAACAGCACATCAACATTGACACTCTGACCTCAGATCCCCGATTGTATATGAAAATTTCTGGCAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000460773.5
ENST00000682941.1
CDS GCA 72 bp TTTGGCAACACAATGGCAGCTAAATCTCAGAGAGAATaGTGCAGATTATCAAGCAACTTGTACCAACCCCTG +
Preference number: 6 (lower is better)
Translates to: FGNTMAAKSQRE*CRLSSNLYQPL
Trigger: CAGGGGTTGGTACAAGTTGCTTGATAATCTGCAGCATTCTCTCTGAGATTTAGCTGCCATTGTGTTGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS GCA 72 bp GGATTCTGCTGTACACAGTGCAATGGTATCACGTACTaGATAATGTGTCTTGCAATTGGATTCCCCATCAAG +
Preference number: 6 (lower is better)
Translates to: GFCCTQCNGITY*IMCLAIGFPIK
Trigger: CTTGATGGGGAATCCAATTGCAAGACACATTATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000682941.1
CDS CAA 72 bp AAACTTTGGAACAGAATAATCGCTATTCCTAGCTGCTaGGCGACCTTCTTTGCCTATTCCCACATGGGATTC +
Preference number: 6 (lower is better)
Translates to: KLWNRIIAIPSC*ATFFAYSHMGF
Trigger: GAATCCCATGTGGGAATAGGCAAAGAAGGTCGCCAAGCAGCTAGGAATAGCGATTATTCTGTTCCAAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370557.5
ENST00000460773.5
CDS CCA 72 bp AAATCTTTGTGCAATGTAAGCTTCTGTTTCCGAAACTaGATGATTGCCAACAAACACTGTGCGTGTGCCAAC +
Preference number: 6 (lower is better)
Translates to: KSLCNVSFCFRN*MIANKHCACAN
Trigger: GTTGGCACACGCACAGTGTTTGTTGGCAATCATCCAGTTTCGGAAACAGAAGCTTACATTGCACAAAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000485626.1
ENST00000682941.1
CDS CAA 72 bp AGAGATGGGACCATCTGCATACTGACATGCAGAAATTaGGCAACACAATGGCAGCTAAATCTCAGAGAGAAT +
Preference number: 6 (lower is better)
Translates to: RDGTICILTCRN*ATQWQLNLREN
Trigger: ATTCTCTCTGAGATTTAGCTGCCATTGTGTTGCCAAATTTCTGCATGTCAGTATGCAGATGGTCCCATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327569.7
ENST00000361648.6
CDS TCA 72 bp CTCATACGTCGCCGGACAGCATCAAAGTTTAAGGTGTaGAGAAGTTCATATCTTTTAGCTCCTTTCACCAAA +
Preference number: 6 (lower is better)
Translates to: LIRRRTASKFKV*RSSYLLAPFTK
Trigger: TTTGGTGAAAGGAGCTAAAAGATATGAACTTCTTCACACCTTAAACTTTGATGCTGTCCGGCGACGTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422228.1
CDS CAA 72 bp AAACTTTGGAACAGAATAATCGCTATTCCTAGCTGCTaGGCGACCTTCTTTGCCTTTAATACCTATTCCCAC +
Preference number: 6 (lower is better)
Translates to: KLWNRIIAIPSC*ATFFAFNTYSH
Trigger: GTGGGAATAGGTATTAAAGGCAAAGAAGGTCGCCAAGCAGCTAGGAATAGCGATTATTCTGTTCCAAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000682941.1
CDS GCA 72 bp TGGTTATACCAAGGTTCATCATTGTATGGGGTACTTTaGCAAACATACTTTAGAGTAGTGCATACTGCAGCT +
Preference number: 6 (lower is better)
Translates to: WLYQGSSLYGVL*QTYFRVVHTAA
Trigger: AGCTGCAGTATGCACTACTCTAAAGTATGTTTGGCAAAGTACCCCATACAATGATGAACCTTGGTATAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000460773.5
ENST00000682941.1
CDS TCA 72 bp TACATAATCCACCTGACCAAGTTCTTCATTAAGGTCTaGTGTGTTAACCAGGGCTCCTTCATTAATTTCTTC +
Preference number: 6 (lower is better)
Translates to: YIIHLTKFFIKV*CVNQGSFINFF
Trigger: GAAGAAATTAATGAAGGAGCCCTGGTTAACACATCAGACCTTAATGAAGAACTTGGTCAGGTGGATTATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000460773.5
ENST00000682941.1
CDS TCA 72 bp CCATCAACAGCATCGTTTGTTTTGATTTCTACAGTATaGCATAAACACAAGGCACGTAGAAACAGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PSTASFVLISTV*HKHKARRNSSS
Trigger: AGAAGAGCTGTTTCTACGTGCCTTGTGTTTATGTCATACTGTAGAAATCAAAACAAACGATGCTGTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327569.7
ENST00000361648.6
ENST00000370557.5
ENST00000422228.1
ENST00000460773.5
ENST00000682941.1