RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP11A (Homo sapiens)

Ensembl gene IDs: ENSG00000068650

Ensembl transcript IDs: ENST00000375630.6, ENST00000375645.7, ENST00000375645.8, ENST00000415301.1, ENST00000415301.2, ENST00000418678.5, ENST00000419448.1, ENST00000419631.1, ENST00000459908.5, ENST00000466946.5, ENST00000471555.5, ENST00000479193.1, ENST00000487903.5, ENST00000489577.1, ENST00000493489.1, ENST00000495930.1, ENST00000610419.1, ENST00000614170.1

Found 1692 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGAAGGCTGGCCGTaGTCCGACGCGTGCACGGATGAGGTGCGGCGTGGGTGTGGCCAG +
Preference number: 1 (lower is better)
Translates to: AAAALPSWLVAEGWP*SDACTDEVRRGCGQ
Trigger: CTGGCCACACCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp GCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTC +
Preference number: 1 (lower is better)
Translates to: ARRAELQCGRRAEVR*CLLGSTRVLCATPV
Trigger: GACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp CGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGC +
Preference number: 1 (lower is better)
Translates to: RRAELQCGRRAEVRC*LLGSTRVLCATPVS
Trigger: GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp GCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTaGGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCC +
Preference number: 1 (lower is better)
Translates to: AEPGGRSCSAGGGQR*GAACWDPPVSCVPP
Trigger: GGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGAC +
Preference number: 1 (lower is better)
Translates to: RSCSAGGGQRCGAAC*DPPVSCVPPPSARD
Trigger: GTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTaGCGGAAGGCTGGCCGTGCTCCGACGCGTGCACGGATGAGGTGC +
Preference number: 1 (lower is better)
Translates to: VDWGFRRPRPFPAGS*RKAGRAPTRARMRC
Trigger: GCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR GCA 90 bp TCGTGGCGGAAGGCTGGCCGTGCTCCGACGCGTGCACGGATGAGGTaGGGCGTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGG +
Preference number: 1 (lower is better)
Translates to: SWRKAGRAPTRARMR*GVGVASPAVAAWYR
Trigger: CCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CTGCGGCAGGGCTGGAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGGAGACCGAA +
Preference number: 1 (lower is better)
Translates to: LRQGWKLPAWPCPPT*HCLLHEAAGDGETE
Trigger: TTCGGTCTCCCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp ATGGACATCCTGGCACTTCTGCGGCAGGGCTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCC +
Preference number: 1 (lower is better)
Translates to: MDILALLRQGWKLPA*PCPPTWHCLLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGTCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CGGATGAGGTGCGGCGTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTaGTATAGGGCTGAGCCGAGGGGAGGTTTCAGCTTGCGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: RMRCGVGVASPAVAA*YRAEPRGGFSLRGW
Trigger: CCAGCCTCGCAAGCTGAAACCTCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCACGCCGCACCTCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GGCTCCGTGGACACCTTCTCCTTCCAGGCCGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAGGCGGCCGAGGGACAGGTGCTCTGG +
Preference number: 1 (lower is better)
Translates to: GSVDTFSFQAASVTC*EWELYQAAEGQVLW
Trigger: CCAGAGCACCTGTCCCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGAAGGAGAAGGTGTCCACGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: ALSSHVALPSPRGGR*WGDRNSASPNTQGR
Trigger: CCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp TGGCCTCCTCCCTCGAGACGGTGTGGCCTGCTTGTTCGCCCTGTCTaGTCAGACACAGGCTGGGTTGACTGGGGCTTTAGGCGGCCGCGG +
Preference number: 1 (lower is better)
Translates to: WPPPSRRCGLLVRPV*SDTGWVDWGFRRPR
Trigger: CCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGAGGAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CCA 90 bp GCCGAATGCCCAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTG +
Preference number: 1 (lower is better)
Translates to: AECPEATGVAQQPQC*VQAARVPCSRARPV
Trigger: CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CCTGGCGAGTGGCTGATGGACATCCTGGCACTTCTGCGGCAGGGCTaGAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTT +
Preference number: 1 (lower is better)
Translates to: PGEWLMDILALLRQG*KLPAWPCPPTWHCL
Trigger: AAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGTCCATCAGCCACTCGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp AGACGGTGTGGCCTGCTTGTTCGCCCTGTCTGCTCAGACACAGGCTaGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGC +
Preference number: 1 (lower is better)
Translates to: RRCGLLVRPVCSDTG*VDWGFRRPRPFPAG
Trigger: GCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CCA 90 bp GCAAGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGGTGTGGCCTGCTTGTTCGCCCTGTC +
Preference number: 1 (lower is better)
Translates to: ASRADGHPVGDAGRI*PPPSRRCGLLVRPV
Trigger: GACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR GCA 90 bp GGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTaGCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCA +
Preference number: 1 (lower is better)
Translates to: GRGAVLPVGIHPCPV*HPRQPETGSGARTP
Trigger: TGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp AGGGCAGGCGGGCTTGGACGTAACCGCAGGGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCCGAG +
Preference number: 1 (lower is better)
Translates to: RAGGLGRNRRETTPR*AGYGGASAGMMVSE
Trigger: CTCGGATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp CCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAGAGGCCACTGGTGTGGCTCAACAAC +
Preference number: 1 (lower is better)
Translates to: PLHDSAQGGPAECPS*VEPNAQRPLVWLNN
Trigger: GTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GAATGTCCCTCCTGCGTTGAGCCGAATGCCCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAT +
Preference number: 1 (lower is better)
Translates to: ECPSCVEPNAQRPLV*LNNHSAGSRRPGCH
Trigger: ATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CAGCAGAATGTCCCTCCTGCGTTGAGCCGAATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGT +
Preference number: 1 (lower is better)
Translates to: QQNVPPALSRMPRGH*CGSTTTVLGPGGQG
Trigger: ACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GCCTGGTATAGGGCTGAGCCGAGGGGAGGTTTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAGGGCCTTGTCCAGGGCACCAAGCCT +
Preference number: 1 (lower is better)
Translates to: AWYRAEPRGGFSLRG*TSLKGKGLVQGTKP
Trigger: AGGCTTGGTGCCCTGGACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTCGGCTCAGCCCTATACCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GACAGGTGCTCTGGTAGCCTGGGCTCTGCAGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTGCT +
Preference number: 1 (lower is better)
Translates to: DRCSGSLGSAERQEG*ILSRGPEAVRTHSA
Trigger: AGCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR GCA 90 bp GAACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCG +
Preference number: 1 (lower is better)
Translates to: EHHLGVDPSTGTEDV*SSQPSICLPALAPA
Trigger: CGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTaGTGGCCGGGCAAGCAGGAAACAGCAGCATGTGGCATCCACATG +
Preference number: 1 (lower is better)
Translates to: RTHHHGSTSPYGGHG*WPGKQETAACGIHM
Trigger: CATGTGGATGCCACATGCTGCTGTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp ACATTCTCCCGTAACAGTGGACTGACGGCTCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCACTTCTGCGGCAGGGCTGGAAGCTG +
Preference number: 1 (lower is better)
Translates to: TFSRNSGLTAPCPGE*LMDILALLRQGWKL
Trigger: CAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGGAGAATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGG +
Preference number: 1 (lower is better)
Translates to: PITAALGLLTHPEQR*TDPKTKESPAWGHG
Trigger: CCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp CCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCATGGCTCCACCTCACCCTATGGAGG +
Preference number: 1 (lower is better)
Translates to: PSDPALPTASGLEGC*VKDAPPWLHLTLWR
Trigger: CCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp AAACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTG +
Preference number: 1 (lower is better)
Translates to: KPLPDEQGTAVHPQG*WYPSDPALPTASGL
Trigger: CAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp CTTGTCCAGGGCACCAAGCCTTGCTCACAGAGCAGCTGGTGTAAGTaGAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAAGCCCAGA +
Preference number: 1 (lower is better)
Translates to: LVQGTKPCSQSSWCK*SCDFTPGACSAKPR
Trigger: TCTGGGCTTTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTGAGCAAGGCTTGGTGCCCTGGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GCTCTGGTAGCCTGGGCTCTGCAGAGAGGCAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTGCTTGTTCCA +
Preference number: 1 (lower is better)
Translates to: ALVAWALQRGKRGEF*VAVPRLCAPILLVP
Trigger: TGGAACAAGCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR GCA 90 bp CCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATGGACATCCTGGCACTTCTGCGGCAG +
Preference number: 1 (lower is better)
Translates to: PAKSTFSRNSGLTAP*PGEWLMDILALLRQ
Trigger: CTGCCGCAGAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGG +
Preference number: 1 (lower is better)
Translates to: PSHEHSHTGPRAAVT*DGTAVVMGTAEDGW
Trigger: CCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GTAAAGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCAGGAAACAGCAGCATGTGGCATCCA +
Preference number: 1 (lower is better)
Translates to: VKDAPPWLHLTLWRA*VVAGQAGNSSMWHP
Trigger: TGGATGCCACATGCTGCTGTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp CGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAG +
Preference number: 1 (lower is better)
Translates to: RQPETGSGARTPPWC*PLHGDRGCLLITAK
Trigger: CTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp CAGAGGCCTCTCACAGGGGCCCCTCAGCAAGGAGGCAGGATGCAGTaGAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTG +
Preference number: 1 (lower is better)
Translates to: QRPLTGAPQQGGRMQ*RTPGQCALVCGTCV
Trigger: CACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCTGAGGGGCCCCTGTGAGAGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp CCATCCAGAGGCCTCTCACAGGGGCCCCTCAGCAAGGAGGCAGGATaGAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACAT +
Preference number: 1 (lower is better)
Translates to: PSRGLSQGPLSKEAG*SAGHQDSVHLFVAH
Trigger: ATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCTGAGGGGCCCCTGTGAGAGGCCTCTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GACGGCTCTTCTCTCCCAGTGACAGCAAAGGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCG +
Preference number: 1 (lower is better)
Translates to: DGSSLPVTAKANDGR*VKTQAWGNGLCMTA
Trigger: CGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGCCTTTGCTGTCACTGGGAGAGAAGAGCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GCAAGCAGGAAACAGCAGCATGTGGCATCCACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTCTCTCCCAGTGACAGCAAAGGCCAA +
Preference number: 1 (lower is better)
Translates to: ASRKQQHVASTCGPP*VPGRLFSPSDSKGQ
Trigger: TTGGCCTTTGCTGTCACTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACATGCTGCTGTTTCCTGCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GTGAGTGATCCTGTGTGCAAGCCCCCATGTGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCA +
Preference number: 1 (lower is better)
Translates to: VSDPVCKPPCGHGYE*AWSQKPGNTHAAGP
Trigger: TGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCCACATGGGGGCTTGCACACAGGATCACTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp TGCGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGTGTGATGTTT +
Preference number: 1 (lower is better)
Translates to: CGWPLGTEWSLPRSV*SSQLLATLIFGVMF
Trigger: AAACATCACACCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTaGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTC +
Preference number: 1 (lower is better)
Translates to: QQMPNASGPQLRSAR*LLEGTARVLPSYSL
Trigger: GAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR CCA 90 bp GGCAGCTGTCCTGGCCACTGCATCTGGAAGGGTCATACATCTGACTaGTCATCACCCACTAATCACAGAAGCTGGCCCGACAAGCAAAAC +
Preference number: 1 (lower is better)
Translates to: GSCPGHCIWKGHTSD*SSPTNHRSWPDKQN
Trigger: GTTTTGCTTGTCGGGCCAGCTTCTGTGATTAGTGGGTGATGACCAGTCAGATGTATGACCCTTCCAGATGCAGTGGCCAGGACAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR TCA 90 bp TCAAGCAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTaGGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGC +
Preference number: 1 (lower is better)
Translates to: SSKNISRCRMLLALN*GLPGGYWKELPECC
Trigger: GCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR GCA 90 bp CCCTCAGCAAGGAGGCAGGATGCAGTGCAGGACACCAGGACAGTGTaGACTTGTTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTG +
Preference number: 1 (lower is better)
Translates to: PSARRQDAVQDTRTV*TCLWHMCVYVCACV
Trigger: CACACATGCACACACATATACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CCTGTGCGTGTTTGGGGTGTGTCCATGTGCATCTGTGTGTACGTGTaGGAGCTCACATGTGTACGATGTGTGCACGTGTGTTTACACGTC +
Preference number: 1 (lower is better)
Translates to: PVRVWGVSMCICVYV*ELTCVRCVHVCLHV
Trigger: GACGTGTAAACACACGTGCACACATCGTACACATGTGAGCTCCCACACGTACACACAGATGCACATGGACACACCCCAAACACGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATGCTTCTaGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGC +
Preference number: 1 (lower is better)
Translates to: QAPDQARISADAECF*PSTEVCQVAIGRNC
Trigger: GCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR TCA 90 bp TGTGTGCAGGAGCTTGCACGTTTGTGGTGGGTACATGTACATATGTaGGTGATCCTGTGTGCAAGCCCCCATGTGGACATGGCTATGAGT +
Preference number: 1 (lower is better)
Translates to: CVQELARLWWVHVHM*VILCASPHVDMAMS
Trigger: ACTCATAGCCATGTCCACATGGGGGCTTGCACACAGGATCACTCACATATGTACATGTACCCACCACAAACGTGCAAGCTCCTGCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp AGGCAGGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTaGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTG +
Preference number: 1 (lower is better)
Translates to: RQDAVQDTRTVCTCL*HMCVYVCACVYSRL
Trigger: CAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp TGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTaGTGGACAAGACAAGTTGAATCCTCGTGGCATTTCCCATCTGCA +
Preference number: 1 (lower is better)
Translates to: CAFPTRTWPRETFGV*WTRQVESSWHFPSA
Trigger: TGCAGATGGGAAATGCCACGAGGATTCAACTTGTCTTGTCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 90 bp GTGTGTGTGCATGTGTGCAGTAGAAGCTCATACGTCTCTCTGCTGTaGATACACGTGTGTGAGAGCAAGCCTGTAGGAGCTTGTACATGT +
Preference number: 1 (lower is better)
Translates to: VCVHVCSRSSYVSLL*IHVCESKPVGACTC
Trigger: ACATGTACAAGCTCCTACAGGCTTGCTCTCACACACGTGTATGCACAGCAGAGAGACGTATGAGCTTCTACTGCACACATGCACACACAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp TTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATaGTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGG +
Preference number: 1 (lower is better)
Translates to: FKQAPDQARISADAE*FWPSTEVCQVAIGR
Trigger: CCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR TCA 90 bp TTTAACAGGTGGTACCCTGCTAGATTGTTTAACAATCTGAGGCGGTaGGACCTAACGGAAGGTTTTCAGTGTTTTGGACGCCCTGACCAC +
Preference number: 1 (lower is better)
Translates to: FNRWYPARLFNNLRR*DLTEGFQCFGRPDH
Trigger: GTGGTCAGGGCGTCCAAAACACTGAAAACCTTCCGTTAGGTCTCACCGCCTCAGATTGTTAAACAATCTAGCAGGGTACCACCTGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR CCA 90 bp AAGGGTCATACATCTGACTGGTCATCACCCACTAATCACAGAAGCTaGCCCGACAAGCAAAACAAGATCTGCGTTTTAAATCTCTATCAC +
Preference number: 1 (lower is better)
Translates to: KGHTSDWSSPTNHRS*PDKQNKICVLNLYH
Trigger: GTGATAGAGATTTAAAACGCAGATCTTGTTTTGCTTGTCGGGCCAGCTTCTGTGATTAGTGGGTGATGACCAGTCAGATGTATGACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 90 bp GTTAGTTTAAGGCAAGTAAATACTAACTACTGCGAGGTGGAAAATTaGATGAAGACCCTGCAACGTCATTCACTGAGGATCTTCTCATCC +
Preference number: 1 (lower is better)
Translates to: VSLRQVNTNYCEVEN*MKTLQRHSLRIFSS
Trigger: GGATGAGAAGATCCTCAGTGAATGACGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAGTAGTTAGTATTTACTTGCCTTAAACTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp TTCGGCAAATTATTCCCATTTGTAAAGCTGGTGCCCTCATTTGTCTaGGAGGGTTATTTTGAGACTAAATGCATTCGTATCTGTAGGAGG +
Preference number: 1 (lower is better)
Translates to: FGKLFPFVKLVPSFV*EGYFETKCIRICRR
Trigger: CCTCCTACAGATACGAATGCATTTAGTCTCAAAATAACCCTCTCAGACAAATGAGGGCACCAGCTTTACAAATGGGAATAATTTGCCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 90 bp ATTACTTGCTTCAAAGTTAGTTTAAGGCAAGTAAATACTAACTACTaGGAGGTGGAAAATTGCATGAAGACCCTGCAACGTCATTCACTG +
Preference number: 1 (lower is better)
Translates to: ITCFKVSLRQVNTNY*EVENCMKTLQRHSL
Trigger: CAGTGAATGACGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAGTAGTTAGTATTTACTTGCCTTAAACTAACTTTGAAGCAAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp ATAAACCATCCAGCAAGACTTGAAGAATCTCCATTTGAGCTATGTTaGTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCA +
Preference number: 1 (lower is better)
Translates to: INHPARLEESPFELC*FQFKQAPDQARISA
Trigger: TGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTCTTCAAGTCTTGCTGGATGGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR TCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGATGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: GLTGALGGRGPSQLARGGWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp GCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGA +
Preference number: 2 (lower is better)
Translates to: AELQCGRRAEVRCCL*GSTRVLCATPVSPR
Trigger: TCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: CWVQAARVPCSRARPVTPRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: EAAGVALSSHVALPSPRGGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 2 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCGATGTGGGGACGAGGTaGCGGGATGAGGGGACGTGG +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPDVGTR*RDEGTW
Trigger: CCACGTCCCCTCATCCCGTCACCTCGTCCCCACATC...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 2 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGATGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: GLTGALGGRGPSQLARGGWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 2 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 2 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCTCAGCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: QGAHLPMPIQRPLTGAPQPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...CTGAGGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: WVSLAGAPFHSVARGGRETPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp GGTGTGGCCTGCTTGTTCGCCCTGTCTGCTCAGACACAGGCTGGGTaGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGT +
Preference number: 2 (lower is better)
Translates to: GVACLFALSAQTQAG*TGALGGRGPSQLAR
Trigger: ACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRAMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: PLVWLNNHSAGSRRPGCHGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...ATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRAAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGCGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRRDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: AKPRHSARRGTLHPREAWRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 2 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGT +
Preference number: 2 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRKESPA*GHGDEG
Trigger: ACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTT...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 2 (lower is better)
Translates to: AGVALSSHVALPSPRGGRGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 2 (lower is better)
Translates to: PVCHPRQPETGSGARTPPPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTGGGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: LGWNCSGDGNRRGWVGAPRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...CGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACCGCAGGGAAACCACTCCCTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: APTHRAGGLGRNRRETTPWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...GGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPRAAVT*DGTAVV
Trigger: CACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCT...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 2 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETDGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 2 (lower is better)
Translates to: PVCHPRQPETGSGARTPPRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp AAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGG +
Preference number: 2 (lower is better)
Translates to: KYLLSSTSETPSGFH*PEPRSTAWRGAGVR
Trigger: CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTAPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 2 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPGHGYE*AWSQKP
Trigger: TGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCC...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRAAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCAGCAAGGAGGCAGGATaGAGTGCAGGACACCAGGAC +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPSKEAG*SAGHQD
Trigger: GTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCT...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACCGCAGGGAAACCACTCCCGCGGTCCCGAGGCTGTaGGCACCCATTCTGCTTGTT +
Preference number: 2 (lower is better)
Translates to: APTHRAGGLGRNRRETTPAVPRL*APILLV
Trigger: AACAAGCAGAATGGGTGCGCACAGCCTCGGGACCGC...GGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPRAAVT*DGTAVV
Trigger: CACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: WPCPPTWHCLLHEAAGDGANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTAGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 2 (lower is better)
Translates to: AGQILRRRRALRGDMGTRPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 2 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGG +
Preference number: 2 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQDAGRI*PPPSRR
Trigger: CCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTC...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CAA 90 bp GGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAACCACTCCCAGATGAGCAGGGTACG +
Preference number: 2 (lower is better)
Translates to: GRPKLSQPQHTGQAG*DVTAGKPLPDEQGT
Trigger: CGTACCCTGCTCATCTGGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACAGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 2 (lower is better)
Translates to: PCPVCHPRQPETGSGARTVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...TGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: LGLLTHPEQRWTDPKTKEPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...CTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCACCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 2 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 2 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 2 (lower is better)
Translates to: AKPRHSARRGTLHPREAWRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 2 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 2 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCTTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPFSLRG*TSLKGK
Trigger: CTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAA...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACATCTCTCTGTTGCTGTTaGCCACAGCTGCCGGCACAG +
Preference number: 2 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETSLCCC*PQLPAQ
Trigger: CTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGA...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR CAA 90 bp TGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGCCACTGGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: CMTARRVGQQNVPPA*SRMPRGHWCGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAATGGAACTGCAGTGGTaGTGGGAACCGCCGAGGATG +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPMELQW*WEPPRM
Trigger: CATCCTCGGCGGTTCCCATCACCACTGCAGTTCCAT...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 2 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTATPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGAAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 2 (lower is better)
Translates to: GLTGALGGRGPSQLARGGSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: HRAAGVSEAATSPPGPALTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGCGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 2 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWRDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 2 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGATGTGGTGCGTACATGTaGATGTGTACGTGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGCGAYM*MCTCGS
Trigger: GCTCCCACACGTACACATGCACATGTACGCACCACA...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 2 (lower is better)
Translates to: PSICLPALAPAKSTFSRNGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPRAAVT*DGTAVV
Trigger: CACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCT...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTACGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGT +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSKESPA*GHGDEG
Trigger: ACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTT...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 2 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFKRGEF*VAVPRL
Trigger: CAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTT...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR-3UTR GCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGTCTGCTCAAGCCAGTTaGTCGCTACCCTCATCTTTG +
Preference number: 2 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGSAQAS*SLPSSL
Trigger: CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGA...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCTATTGTGTAGGAGCATaGACACGCGTGTCTGTGGTA +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPYCVGA*TRVSVV
Trigger: TACCACAGACACGCGTGTGCATGCTCCTACACAATA...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTACGCCTGCAGGAGCCTaGGCATGTGTTTGTGGTGCG +
Preference number: 2 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCTPAGA*ACVCGA
Trigger: CGCACCACAAACACATGCGCAGGCTCCTGCAGGCGT...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGATAAAGATGGTTGACTaGTCGACAGAAAGGCACTGG +
Preference number: 2 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGIKMVD*STERHW
Trigger: CCAGTGCCTTTCTGTCGAGCAGTCAACCATCTTTAT...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: AGQILRRRRALRGDMGTRVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGATGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp CCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAA +
Preference number: 2 (lower is better)
Translates to: PSARDRFWCTNTTLV*TPPRGQRMSAHHSQ
Trigger: TTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 2 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 2 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 2 (lower is better)
Translates to: LGLLTHPEQRWTDPKTKESRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...CTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 2 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGACTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGLDSLC*CWPQLP
Trigger: CGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAG...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: PSICLPALAPAKSTFSRNTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGATLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTALLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCC +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSLGNTL*VSLAGA
Trigger: GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp AACATTTGTTTAAACGCTCAGCAAGCCGAGCGGATGGTCACCCTGTaGGAGACGCTGGCCGCATCTGGCCTCCTCCCTCGAGACGGTGTG +
Preference number: 2 (lower is better)
Translates to: NICLNAQQAERMVTL*ETLAASGLLPRDGV
Trigger: CACACCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGCTGAGCGTTTAAACAAATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 2 (lower is better)
Translates to: TVSTGLGPSITRAFPHGTASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...GGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 2 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: QPSICLPALAPAKSTFSRAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 2 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCTCCAGCGTTGGTGGTaGTTTCCTGAAAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSLQRWW*FPERQQ
Trigger: CTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGTGTGTAGGAGCCTGTaGGTGTTTGGGGTGTGTCCA +
Preference number: 2 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQVCRSL*VFGVCP
Trigger: TGGACACACCCCAAACACGCACAGGCTCCTACACAC...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 2 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGATCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAGTGCATGTGTACGTGTaGGAGCTCACGTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQVHVYV*ELTCGR
Trigger: TCTCCCACACGTGAGCTCCCACACGTACACATGCAC...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 2 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGTACGTCTCTCTGCTGTaGATACACGTGTGTGAGAGC +
Preference number: 2 (lower is better)
Translates to: HRAAGVSEAATSPPGPALYVSLL*IHVCES
Trigger: GCTCTCACACACGTGTATGCACAGCAGAGAGACGTA...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp CAGTACGGAGAACAACAGGGACTTCCTATCACAGCAGCCCTGGGGTaGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAG +
Preference number: 2 (lower is better)
Translates to: QYGEQQGLPITAALG*LTHPEQRWTDPKTK
Trigger: CTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTGTTGTTCTCCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 2 (lower is better)
Translates to: KRHVHSLHRLRTIHHTSIASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...AATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGATGTGGACATGGCTATaGGTGAGCGTGGAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: AKPRHSARRGTLHPREAWMWTWL*VSVEPK
Trigger: TTTTGGCTCCACGCTCACTCATAGCCATGTCCACAT...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp ACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCGACTTGGGATGGAACTaGAGTGGTGATGGGAACCGC +
Preference number: 2 (lower is better)
Translates to: TVSTGLGPSITRAFPHGTDLGWN*SGDGNR
Trigger: GCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTC...GGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 2 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCSRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGAGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGATGTGTGCAGGAGCTTaGACGTTTGTGGTGGGTACA +
Preference number: 2 (lower is better)
Translates to: AKPRHSARRGTLHPREAWMCAGA*TFVVGT
Trigger: TGTACCCACCACAAACGTGCAAGCTCCTGCACACAT...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 2 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAACCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 2 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCACGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGCACTGGCTCTTAGTCTaGACTCTCTCTGTTGCTGTT +
Preference number: 2 (lower is better)
Translates to: CGIHMWATMGPWTALLSQHWLLV*TLSVAV
Trigger: AACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTG...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR CAA 90 bp GGCCAAGGCTCAACTCAGGGGAGTCCCCACAGCCTGTCTAAACATTaGTTTAAACGCTCAGCAAGCCGAGCGGATGGTCACCCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: GQGSTQGSPHSLSKH*FKRSASRADGHPVG
Trigger: TCCAACAGGGTGACCATCCGCTCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTGAGTTGAGCCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAAATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTACCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 2 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 2 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACACATCCTCTGGTAGTTaGGGAACGGCCAGATCACTC +
Preference number: 2 (lower is better)
Translates to: PSICLPALAPAKSTFSRNTSSGS*GTARSL
Trigger: GAGTGATCTGGCCGTTCCTCAACTACCAGAGGATGT...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR GCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCACGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAGTAAATACTAACTACTaGGAGGTGGAAAATTGCATG +
Preference number: 2 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGVNTNY*EVENCM
Trigger: CATGCAATTTTCCACCTCGCAGTAGTTAGTATTTAC...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGATTCACCCCCGGGGCCTaGTCTGCAAAGCCCAGACAT +
Preference number: 2 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRFTPGA*SAKPRH
Trigger: ATGTCTGGGCTTTGCAGAGCAGGCCCCGGGGGTGAA...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCATCAGAAACTCAGGCTaGTGGAAGTCTGAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRIRNSG*WKSEKA
Trigger: TGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGAT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGATGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 2 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 2 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAG +
Preference number: 2 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLHPEQR*TDPKTK
Trigger: CTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTG...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGCTCCTCCAGCGTTGGTaGTGCTTTCCTGAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLLLQRW*CFPERQ
Trigger: CTGCCTTTCAGGAAAGCACCACCAACGCTGGAGGAG...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: PERQQFQRLKSESHTEMSFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCACGACGCGTGCACGGATaGGGTGCGGCGTGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSRRVHG*GAAWVW
Trigger: CCACACCCACGCCGCACCTCATCCGTGCACGCGTCG...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATG +
Preference number: 2 (lower is better)
Translates to: PERQQFQRLKSESHTEMSGLTAP*PGEWLM
Trigger: CATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCC...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAGTGCTTACCTGTACATaGATGTGTGTATCACACGTC +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQVLTCT*MCVSHV
Trigger: GACGTGTGATACACACATGCATGTACAGGTAAGCAC...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCACTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGC +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSLVAEG*PCSDAC
Trigger: GCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAG...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTT +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTAPSSLV*CLSPYF
Trigger: AAAATAAGGTGACAAACATCACACCAAAGATGAGGG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGAGAGGCACACACTAGGTaGTCAGTAATGTCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: GVRFPQEHGRVRRLEFDGEAHTR*SVMSAP
Trigger: GGGAGCTGACATTACTGAGCACCTAGTGTGTGCCTC...TCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR CCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACTGGGAACTCATTTGTaGTGTACACATGAATGTGCA +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQLGTHL*CTHECA
Trigger: TGCACATTCATGTGTACACCACAAATGAGTTCCCAG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTGGTGCTCTGGTAGCCTaGGCTCTGCAGAGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAGALVA*ALQRGK
Trigger: CTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACC...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACAAGACAAGTTGAATCCTCGTGGCATTTCCCATCTGCAGCCTTTTCGGCAAATCCAGGGCAGCTGTCCTaGCCACTGCATCTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: TRQVESSWHFPSAAFSANPGQLS*PLHLEG
Trigger: CCCTTCCAGATGCAGTGGCCAGGACAGCTGCCCTGG...ATTTGCCGAAAAGGCTGCAGATGGGAAATGCCACGAGGATTCAACTTGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR TCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTT +
Preference number: 2 (lower is better)
Translates to: PSICLPALAPAKSTFSRNRLLEV*ESIKMV
Trigger: AACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCT...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR GCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACC +
Preference number: 2 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQRAEVR*CLLGST
Trigger: GGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGAACTGCCAGAGTGCTaGCTAGTTACTCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: RISADAECFWPSTEVCQVELPEC*LVTLSA
Trigger: AGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTC...CACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGAGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: TYRESAPATGVTFMPILGCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTATCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLSPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR CAA 90 bp CTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTTGGTGTGATGTTTGTCACCTTATTT +
Preference number: 2 (lower is better)
Translates to: LGTEWSLPRSVCSSQ*LATLIFGVMFVTLF
Trigger: AAATAAGGTGACAAACATCACACCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTCTTCTGGCCCTCAACTaGGGTCTGCCAGGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTLLALN*GLPGGY
Trigger: ATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAG...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR GCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAGCTCATACGTCTCTCTaGTGTGCATACACGTGTGTG +
Preference number: 2 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRAHTSL*CAYTCV
Trigger: CACACACGTGTATGCACAGCAGAGAGACGTATGAGC...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTTCAGCAGATGCCGAATaGTTCTGGCCCTCAACTGAG +
Preference number: 2 (lower is better)
Translates to: PQDCQKAQESANWLHTDVSADAE*FWPSTE
Trigger: CTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGA...AACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR GCA 90 bp AGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCAGGACCACAGATGTTCCAAATaGAGCATAAACCATCCAGCA +
Preference number: 2 (lower is better)
Translates to: RFPRVTTRKTLVPQLPQDHRCSK*SINHPA
Trigger: TGCTGGATGGTTTATGCTGCATTTGGAACATCTGTG...GTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCGCATTCATCAGAGATTaGAACATTCAGTCAAAACTC +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARAFIRD*NIQSKL
Trigger: GAGTTTTGACTGAATGTTCCAATCTCTGATGAATGC...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp GTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTaGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCT +
Preference number: 2 (lower is better)
Translates to: VLFSTSQCKTHELSG*KNKAGGFPRQHRTP
Trigger: AGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTCGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 2 (lower is better)
Translates to: PERQQFQRLKSESHTEMSRDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTCTGAGGTCTGCCAGGTaGCTATTGGAAGGAACTGCC +
Preference number: 2 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTLRSAR*LLEGTA
Trigger: GGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAG...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR CAA 90 bp GAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGACAAGACAAGTaGAATCCTCGTGGCATTTCCCATCTGCAGCCTTTTCGGCAAATT +
Preference number: 2 (lower is better)
Translates to: EHGRVRRLEFDGQDK*NPRGISHLQPFRQI
Trigger: AATTTGCCGAAAAGGCTGCAGATGGGAAATGCCACGAGGATTCAACTTGTCTTGTCCATCAAACTCCAAACGTCTCACGCGGCCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR TCA 90 bp AAAAACTTCAGGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAAACAATCTGAGGCGGTaGGACCTAACGGAAGGTTTT +
Preference number: 2 (lower is better)
Translates to: KNFRCAFPTRTWPRETFGNNLRR*DLTEGF
Trigger: AAAACCTTCCGTTAGGTCTCACCGCCTCAGATTGTT...TCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACCTGAAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR GCA 90 bp CTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCAAGAATATCAGCAGATaGCGAATGCTTCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: LRTVRKHRKVQTGSTQMFKNISR*RMLLAL
Trigger: GAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTT...GAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AAAACTTCAGGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGGGTCATACATCTGACTaGTCATCACCCACTAATCAC +
Preference number: 2 (lower is better)
Translates to: KTSGVRFPQEHGRVRRLEGHTSD*SSPTNH
Trigger: GTGATTAGTGGGTGATGACCAGTCAGATGTATGACC...CTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACCTGAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR TCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGAAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCACAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGATGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 2 (lower is better)
Translates to: PERQQFQRLKSESHTEMSSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCC +
Preference number: 2 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISERQEG*ILSRGP
Trigger: GGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTC...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCAGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTAAGGAACTGCCAGAGTaGTGCCTAGTTACTCTCTCT +
Preference number: 2 (lower is better)
Translates to: LKDNLGHRFPRVTTRKTLKELPE*CLVTLS
Trigger: AGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTT...AAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR GCA 90 bp TCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGACCCTCAACTGAGGTCTaGCAGGTGGCTATTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SPFELCCFQFKQAPDQARPSTEV*QVAIGR
Trigger: CCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGG...TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 2 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGCTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLLLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCCCCCTCGGGACAGAGTaGAGTCTTCCCCGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISPLGTE*SLPRSV
Trigger: GACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGG...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAAGGTCACACATGCTTTaGTGCATGTACACGTGTGTG +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGRSHML*CMYTCV
Trigger: CACACACGTGTACATGCACCAAAGCATGTGTGACCT...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TATTTTGAGACTAAATGCATTCGTATCTGTAGGAGGCACACACTAGGTGCTCAGCCTGGCCACTGCATCTaGAAGGGTCATACATCTGAC +
Preference number: 2 (lower is better)
Translates to: YFETKCIRICRRHTLGAQPGHCI*KGHTSD
Trigger: GTCAGATGTATGACCCTTCCAGATGCAGTGGCCAGG...CTGAGCACCTAGTGTGTGCCTCCTACAGATACGAATGCATTTAGTCTCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCT +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRLPRSV*SSQLLA
Trigger: AGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGATCTGTAGGTCACACATaGTTTGGTGCATGTACACGT +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGSVGHT*FGACTR
Trigger: ACGTGTACATGCACCAAAGCATGTGTGACCTACAGA...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGACATGTGTACGATGTGTaGACGTGTGTTTACACGTCT +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGHVYDV*TCVYTS
Trigger: AGACGTGTAAACACACGTGCACACATCGTACACATG...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGTGTGGTGCGTACATGTaGATGTGTACGTGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLCGAYM*MCTCGS
Trigger: GCTCCCACACGTACACATGCACATGTACGCACCACA...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGATATTTTGAGACTAAATaGATTCGTATCTGTAGGAGG +
Preference number: 2 (lower is better)
Translates to: GVRFPQEHGRVRRLEFDGYFETK*IRICRR
Trigger: CCTCCTACAGATACGAATGCATTTAGTCTCAAAATA...TCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR CCA 90 bp TTTCCCATCTGCAGCCTTTTCGGCAAATTATTCCCATTTGTAAAGCTGGTGCCCACTAATCACAGAAGCTaGCCCGACAAGCAAAACAAG +
Preference number: 2 (lower is better)
Translates to: FPICSLFGKLFPFVKLVPTNHRS*PDKQNK
Trigger: CTTGTTTTGCTTGTCGGGCCAGCTTCTGTGATTAGT...GGGCACCAGCTTTACAAATGGGAATAATTTGCCGAAAAGGCTGCAGATGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR TCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCATGTACATATGTGAGTaGTCCTGTGTGCAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCMYICE*SCVQAP
Trigger: GGGGGCTTGCACACAGGATCACTCACATATGTACAT...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGATGGTATGTGTACACGTaGATGTTCTGCATGTCTGTA +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGWYVYT*MFCMSV
Trigger: TACAGACATGCAGAACATGCACGTGTACACATACCA...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATTTGGTGGTGCTTTCCTaGAAGGCAGCAGTTTCAGCG +
Preference number: 2 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNLVVLS*KAAVSA
Trigger: CGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAA...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTCCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTT +
Preference number: 2 (lower is better)
Translates to: TYRESAPATGVTFMPILGPSSLV*CLSPYF
Trigger: AAAATAAGGTGACAAACATCACACCAAAGATGAGGG...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGTACACGTGCATGTTCTaGATGTCTGTAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLYTCMF*MSVGHT
Trigger: TGTGTGACCTACAGACATGCAGAACATGCACGTGTA...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGACAAATATCTGCCCGTTaGTTGTCACAGTTGTATTTT +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGQISAR*LSQLYF
Trigger: AAAATACAACTGTGACAAGCAACGGGCAGATATTTG...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR TCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCTGCAACGTCATTCACTaGGGATCTTCTCATCCTTTT +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCCNVIH*GSSHPF
Trigger: AAAAGGATGAGAAGATCCTCAGTGAATGACGTTGCA...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp AAAGTCAGAACTTTTCTAGGCTTCCTGATACCAGAAAGACATCCATGTTTACAAATGGACAAGACAAGTTaGATCCTCGTGGCATTTCCC +
Preference number: 2 (lower is better)
Translates to: KVRTFLGFLIPERHPCLQMDKTS*ILVAFP
Trigger: GGGAAATGCCACGAGGATTCAACTTGTCTTGTCCAT...TTGTAAACATGGATGTCTTTCTGGTATCAGGAAGCCTAGAAAAGTTCTGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR GCA 90 bp AAAGTCAGAACTTTTCTAGGCTTCCTGATACCAGAAAGACATCCATGTTTACAAGTGGCATTTCCCATCTaGAGCCTTTTCGGCAAATTA +
Preference number: 2 (lower is better)
Translates to: KVRTFLGFLIPERHPCLQVAFPI*SLFGKL
Trigger: TAATTTGCCGAAAAGGCTGCAGATGGGAAATGCCAC...TTGTAAACATGGATGTCTTTCTGGTATCAGGAAGCCTAGAAAAGTTCTGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACAGGTGTTACATTTATaGCCATATTGGGTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRQVLHL*PYWVPK
Trigger: TTTAGGAACCCAATATGGGCATAAATGTAACACCTG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCCAGGTGTTACATTTATaGCCATATTGGGTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISQVLHL*PYWVPK
Trigger: TTTAGGAACCCAATATGGGCATAAATGTAACACCTG...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp AGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTaGAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCC +
Preference number: 3 (lower is better)
Translates to: RGRGDAEPGGRS*SAGGGQRCGAA
Trigger: GGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTG +
Preference number: 3 (lower is better)
Translates to: EGTWGRRARRAELQCGRRAAGVA*SSHVAL
Trigger: CAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp ACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTG +
Preference number: 3 (lower is better)
Translates to: TWGRRARRAELQ*GRRAEVRCCLL
Trigger: CAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GGGCGGCCACACAAGGACCTCAGGGCAGGGTGGCCCTaGGGACGCCTGCGGCTGGCCCCTCGGGACAGAGTG +
Preference number: 3 (lower is better)
Translates to: GRPHKDLRAGWP*GRLRLAPRDRV
Trigger: CACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCCAGGGCCACCCTGCCCTGAGGTCCTTGTGTGGCCGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGCACGGATGAGGTGCGG +
Preference number: 3 (lower is better)
Translates to: AAALPSWLVAEG*PCSDACTDEVR
Trigger: CCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTaGCGGAAGGCTGGCCGTGCTCCGACGCGTGCACGG +
Preference number: 3 (lower is better)
Translates to: GFRRPRPFPAGS*RKAGRAPTRAR
Trigger: CCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR GCA 72 bp GCCCTTCCCAGCTGGCTCGTGGCGGAAGGCTGGCCGTaGTCCGACGCGTGCACGGATGAGGTGCGGCGTGGG +
Preference number: 3 (lower is better)
Translates to: ALPSWLVAEGWP*SDACTDEVRRG
Trigger: CCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp GGCGGAAGGCTGGCCGTGCTCCGACGCGTGCACGGATaGGGTGCGGCGTGGGTGTGGCCAGTCCTGCTGTGG +
Preference number: 3 (lower is better)
Translates to: GGRLAVLRRVHG*GAAWVWPVLLW
Trigger: CCACAGCAGGACTGGCCACACCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGGCTCGTGGCGGAAGGCTGGCCGTGCTCCGACGCGTaGACGGATGAGGTGCGGCGTGGGTGTGGCCAGTCC +
Preference number: 3 (lower is better)
Translates to: WLVAEGWPCSDA*TDEVRRGCGQS
Trigger: GGACTGGCCACACCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GGCTGGAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGG +
Preference number: 3 (lower is better)
Translates to: GWKLPAWPCPPT*HCLLHEAAGDG
Trigger: CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGACCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACA +
Preference number: 3 (lower is better)
Translates to: GLTGALGGRGPSQLARGGPSGFH*PEPRST
Trigger: TGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR GCA 72 bp GAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGTGTCCTGTGTGCCACC +
Preference number: 3 (lower is better)
Translates to: ELQCGRRAEVRC*LLGSTRVLCAT
Trigger: GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp AGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCA +
Preference number: 3 (lower is better)
Translates to: SAGGGQRCGAAC*DPPVSCVPPPS
Trigger: TGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPTGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCAAAACGCACACACCATaGTTTGCGGGGGCAGCGTGG +
Preference number: 3 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGKTHTP*FAGAAW
Trigger: CCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTT...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGGACATCCTGGCACTTCTGCGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCC +
Preference number: 3 (lower is better)
Translates to: WTSWHFCGRAGS*RRGLVLPRGTA
Trigger: GGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGG +
Preference number: 3 (lower is better)
Translates to: CRAPRKHPLGFT*RSPVPQRGAGR
Trigger: CCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp ACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTaGCAAGCCAGGGCGGCCACACAAGGACCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: THHCLRGQRGQG*QARAATQGPQG
Trigger: GCCCTGAGGTCCTTGTGTGGCCGCCCTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRTGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAG +
Preference number: 3 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLNTTLV*TPPRGQ
Trigger: CTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGCCCAGAGGCCACTGGTGTGGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGG +
Preference number: 3 (lower is better)
Translates to: CPEATGVAQQPQ*WVQAARVPCSR
Trigger: CCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAGAGGCCACTGGTGTGG +
Preference number: 3 (lower is better)
Translates to: DSAQGGPAECPS*VEPNAQRPLVW
Trigger: CCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTaGCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCA +
Preference number: 3 (lower is better)
Translates to: AVLPVGIHPCPV*HPRQPETGSGA
Trigger: TGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GCCGCATCTGGCCTCCTCCCTCGAGACGGTGTGGCCTaGTTGTTCGCCCTGTCTGCTCAGACACAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: AASGLLPRDGVA*LFALSAQTQAG
Trigger: CCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGAGGAGGCCAGATGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CCA 72 bp CCAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCA +
Preference number: 3 (lower is better)
Translates to: PEATGVAQQPQC*VQAARVPCSRA
Trigger: TGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp TGCGGCGTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTaGTATAGGGCTGAGCCGAGGGGAGGTTTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: CGVGVASPAVAA*YRAEPRGGFSL
Trigger: CAAGCTGAAACCTCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCACGCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp AGCAAGCCGAGCGGATGGTCACCCTGTTGGAGACGCTaGCCGCATCTGGCCTCCTCCCTCGAGACGGTGTGG +
Preference number: 3 (lower is better)
Translates to: SKPSGWSPCWRR*PHLASSLETVW
Trigger: CCACACCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp CGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCCACTGGTGTGGCTCAA +
Preference number: 3 (lower is better)
Translates to: RAGWASRMSLLR*AECPEATGVAQ
Trigger: TTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp TCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCAGCCAGCCCCAACACA +
Preference number: 3 (lower is better)
Translates to: SHVALPSPRGGR*WGDRNSASPNT
Trigger: TGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp AGGGCTGAGCCGAGGGGAGGTTTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAGGGCCTTGTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: RAEPRGGFSLRG*TSLKGKGLVQG
Trigger: GCCCTGGACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTCGGCTCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGGTGTGGCCTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: ADGHPVGDAGRI*PPPSRRCGLLV
Trigger: AACAAGCAGGCCACACCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp TACGGCGGTGCATCCGCAGGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGCATCCGGATTGGAGGG +
Preference number: 3 (lower is better)
Translates to: YGGASAGMMVSE*PGPSHSIRIGG
Trigger: CCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATCATCCCTGCGGATGCACCGCCGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp CCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCGGCCCTTCCCACAGCA +
Preference number: 3 (lower is better)
Translates to: PDEQGTAVHPQG*WYPSDPALPTA
Trigger: TGCTGTGGGAAGGGCCGGGTCACTCGGATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp GCCTGGGCTCTGCAGAGAGGCAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTG +
Preference number: 3 (lower is better)
Translates to: AWALQRGKRGEF*VAVPRLCAPIL
Trigger: CAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR TCA 72 bp TCTGGTAGCCTGGGCTCTGCAGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCCGAGGCTGTGCGCACC +
Preference number: 3 (lower is better)
Translates to: SGSLGSAERQEG*ILSRGPEAVRT
Trigger: GGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGCTACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR GCA 72 bp AGGTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTGGGCCAGCAGAATGTC +
Preference number: 3 (lower is better)
Translates to: RWVKTQAWGNGL*MTARRVGQQNV
Trigger: GACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTaGACGAACACCACCTTGGTGTTGACCCCTCCACGG +
Preference number: 3 (lower is better)
Translates to: CVPPPSARDRFW*TNTTLVLTPPR
Trigger: CCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp TCCTGCGTTGAGCCGAATGCCCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCA +
Preference number: 3 (lower is better)
Translates to: SCVEPNAQRPLV*LNNHSAGSRRP
Trigger: TGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp CACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTaGTGGCCGGGCAAGCAGGAAACAGCAGCATGTGGC +
Preference number: 3 (lower is better)
Translates to: HHGSTSPYGGHG*WPGKQETAACG
Trigger: GCCACATGCTGCTGTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCACCACCATGGCTCCACCTCACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCAGGAAACAGCAGCATG +
Preference number: 3 (lower is better)
Translates to: APPWLHLTLWRA*VVAGQAGNSSM
Trigger: CATGCTGCTGTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp CGCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGTATGTGGGGACGGGAC +
Preference number: 3 (lower is better)
Translates to: RWTDPKTKESPA*GHGDEGMWGRD
Trigger: GTCCCGTCCCCACATACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGG +
Preference number: 3 (lower is better)
Translates to: AALGLLTHPEQR*TDPKTKESPAW
Trigger: CCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTG +
Preference number: 3 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAAAGVA*SSHVAL
Trigger: CAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: STSETPSGFHLPEPRSTANVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp GGGCTTGGACGTAACCGCAGGGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCATCCGCAGGGATGATG +
Preference number: 3 (lower is better)
Translates to: GLGRNRRETTPR*AGYGGASAGMM
Trigger: CATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp CAGGGAAACCACTCCCAGATGAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGTATCCGAGTGACCCGG +
Preference number: 3 (lower is better)
Translates to: QGNHSQMSRVRR*IRRDDGIRVTR
Trigger: CCGGGTCACTCGGATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp CCCTCGAGACGGTGTGGCCTGCTTGTTCGCCCTGTCTaGTCAGACACAGGCTGGGTTGACTGGGGCTTTAGG +
Preference number: 3 (lower is better)
Translates to: PSRRCGLLVRPV*SDTGWVDWGFR
Trigger: CCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CCA 72 bp GTAAAGGACGCACCACCATGGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAC +
Preference number: 3 (lower is better)
Translates to: VKDAPPWLHLTL*RAWVVAGQAGN
Trigger: GTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp TCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTGGTGTTGACCCCTCCA +
Preference number: 3 (lower is better)
Translates to: SCVPPPSARDRF*CTNTTLVLTPP
Trigger: TGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: RAAGVSEAATSPPGPALQNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 3 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAG +
Preference number: 3 (lower is better)
Translates to: AKPRHSARRGTLHPREAWNTTLV*TPPRGQ
Trigger: CTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp CCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCATGGCTCCACCTCACC +
Preference number: 3 (lower is better)
Translates to: PALPTASGLEGC*VKDAPPWLHLT
Trigger: GGTGAGGTGGAGCCATGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GAGCATTCCCACACGGGACCTAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTGATGGGAACCGCCGAG +
Preference number: 3 (lower is better)
Translates to: EHSHTGPRAAVT*DGTAVVMGTAE
Trigger: CTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGAATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GGCAAGCAGGAAACAGCAGCATGTGGCATCCACATGTaGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: GKQETAACGIHM*ATMGPWTALLS
Trigger: GGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACATGCTGCTGTTTCCTGCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCGGATTGGAGGGTTGTaGAGTAAAGGACGCACCACC +
Preference number: 3 (lower is better)
Translates to: HRAAGVSEAATSPPGPALRIGGL*SKGRTT
Trigger: GGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCG...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGATGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTCTCTCTCTGTTGCTGTaGGCCACAGCTGCCGGCACA +
Preference number: 3 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSLSLLL*ATAAGT
Trigger: TGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAG...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CAA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 3 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTG +
Preference number: 3 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAAAGVA*SSHVAL
Trigger: CAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGC...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 3 (lower is better)
Translates to: PRDRVESSPFCLLKPVARVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp GAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGAGGATGTCTGCTCATC +
Preference number: 3 (lower is better)
Translates to: ETGSGARTPPWC*PLHGDRGCLLI
Trigger: GATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TCAACATTCTCCCGTAACAGTGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATGGACATCCTGGCACTT +
Preference number: 3 (lower is better)
Translates to: STFSRNSGLTAP*PGEWLMDILAL
Trigger: AAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGGAGAATGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp CCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGT +
Preference number: 3 (lower is better)
Translates to: PLGTEWSLPRSV*SSQLLATLIFG
Trigger: ACCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 3 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGACGCATTCATCAGAGATaGGAACATTCAGTCAAAACT +
Preference number: 3 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGRIHQR*EHSVKT
Trigger: AGTTTTGACTGAATGTTCCAATCTCTGATGAATGCG...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp CCTGTGTGCAAGCCCCCATGTGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCAGGTAACACGCATGCA +
Preference number: 3 (lower is better)
Translates to: PVCKPPCGHGYE*AWSQKPGNTHA
Trigger: TGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCCACATGGGGGCTTGCACACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTaGCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCT +
Preference number: 3 (lower is better)
Translates to: ADAECFWPSTEV*QVAIGRNCQSA
Trigger: AGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR CCA 72 bp AAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTG +
Preference number: 3 (lower is better)
Translates to: KIPTVEHLGNTL*VSLAGAPFHSV
Trigger: CACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp CCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTaGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGT +
Preference number: 3 (lower is better)
Translates to: PNASGPQLRSAR*LLEGTARVLPS
Trigger: ACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CAA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAATGCACGAACACCACCTaGGTGTTGACCCCTCCACGG +
Preference number: 3 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQCTNTT*VLTPPR
Trigger: CCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCA...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 3 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTACGCACACACCATTGTTaGCGGGGGCAGCGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLRTHHC*RGQRGQ
Trigger: CTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCG...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATaGTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: APDQARISADAE*FWPSTEVCQVA
Trigger: AGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR GCA 72 bp AGAAAGGCACTGGCTCTTAGTCTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCGGCACAGGACTTTCTT +
Preference number: 3 (lower is better)
Translates to: RKALALSLDSLC*CWPQLPAQDFL
Trigger: AAGAAAGTCCTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTGCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CAA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAACACCACCTTGGTGTaGACCCCTCCACGGGGACAG +
Preference number: 3 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLNTTLV*TPPRGQ
Trigger: CTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAACAGCAGCCCTGGGGTaGCTAACCCACCCAGAGCAG +
Preference number: 3 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGTAALG*LTHPEQ
Trigger: CTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGT...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp AATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTaGGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCA +
Preference number: 3 (lower is better)
Translates to: NISRCRMLLALN*GLPGGYWKELP
Trigger: TGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CAA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAAATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 3 (lower is better)
Translates to: QRWWCFPERQQFQRLKSEIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCAGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CAA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGACTGCGAGGTGGAAAATaGCATGAAGACCCTGCAACG +
Preference number: 3 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRLRGGK*HEDPAT
Trigger: CGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAG...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CAA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGACGGCACAGGACTTTCTaGAGGACGTCGGGAAGGAGG +
Preference number: 3 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGRHRTF*RTSGRR
Trigger: CCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCCG...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CAA 90 bp GGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGATGGTACCCTGCTAGATaGTTTAACAATCTGAGGCGG +
Preference number: 3 (lower is better)
Translates to: GVRFPQEHGRVRRLEFDGWYPAR*FNNLRR
Trigger: CCGCCTCAGATTGTTAAACAATCTAGCAGGGTACCA...TCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR TCA 72 bp GAGCTTGCACGTTTGTGGTGGGTACATGTACATATGTaGGTGATCCTGTGTGCAAGCCCCCATGTGGACATG +
Preference number: 3 (lower is better)
Translates to: ELARLWWVHVHM*VILCASPHVDM
Trigger: CATGTCCACATGGGGGCTTGCACACAGGATCACTCACATATGTACATGTACCCACCACAAACGTGCAAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp CATGTGTGCAGTAGAAGCTCATACGTCTCTCTGCTGTaGATACACGTGTGTGAGAGCAAGCCTGTAGGAGCT +
Preference number: 3 (lower is better)
Translates to: HVCSRSSYVSLL*IHVCESKPVGA
Trigger: AGCTCCTACAGGCTTGCTCTCACACACGTGTATGCACAGCAGAGAGACGTATGAGCTTCTACTGCACACATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GTGCACTTGTTTGTGGCACATGTGTGTATATGTGTGTaGATGTGTGTATTCACGCCTGCAGGAGCCTGCGCA +
Preference number: 3 (lower is better)
Translates to: VHLFVAHVCICV*MCVFTPAGACA
Trigger: TGCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAACAAGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GATCAAGCAAGAATATCAGCAGATGCCGAATGCTTCTaGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGA +
Preference number: 3 (lower is better)
Translates to: DQARISADAECF*PSTEVCQVAIG
Trigger: TCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CAA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTAGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCAAGGGGAGGTTTCAGCTaGCGAGGCTGGACCTCCCTA +
Preference number: 3 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSRGGFS*RGWTSL
Trigger: TAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCT...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp TTGCACGTTTGTGGTGGGTACATGTACATATGTGAGTaGTCCTGTGTGCAAGCCCCCATGTGGACATGGCTA +
Preference number: 3 (lower is better)
Translates to: LHVCGGYMYICE*SCVQAPMWTWL
Trigger: TAGCCATGTCCACATGGGGGCTTGCACACAGGATCACTCACATATGTACATGTACCCACCACAAACGTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACAGGAGCTTGCACGTTaGTGGTGGGTACATGTACAT +
Preference number: 3 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRQELAR*WWVHVH
Trigger: ATGTACATGTACCCACCACAAACGTGCAAGCTCCTG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTaGAGTAGAAGCTCATACGTCTCTCTGCTGTGCATA +
Preference number: 3 (lower is better)
Translates to: VVNVRVRVCVHV*SRSSYVSLLCI
Trigger: TATGCACAGCAGAGAGACGTATGAGCTTCTACTGCACACATGCACACACACACGCACACGTACATTCACTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTaGCACATGTGTGTATATGTGTGTGCATGTGTGTAT +
Preference number: 3 (lower is better)
Translates to: AVQDTRTVCTCL*HMCVYVCACVY
Trigger: ATACACACATGCACACACATATACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGACGCATTCATCAGAGATaGGAACATTCAGTCAAAACT +
Preference number: 3 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRRIHQR*EHSVKT
Trigger: AGTTTTGACTGAATGTTCCAATCTCTGATGAATGCG...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp GCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTTATCCCAACCACTGTG +
Preference number: 3 (lower is better)
Translates to: AQASCSLPSSLV*CLSPYFIPTTV
Trigger: CACAGTGGTTGGGATAAAATAAGGTGACAAACATCACACCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp TGGTACCCTGCTAGATTGTTTAACAATCTGAGGCGGTaGGACCTAACGGAAGGTTTTCAGTGTTTTGGACGC +
Preference number: 3 (lower is better)
Translates to: WYPARLFNNLRR*DLTEGFQCFGR
Trigger: GCGTCCAAAACACTGAAAACCTTCCGTTAGGTCTCACCGCCTCAGATTGTTAAACAATCTAGCAGGGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR CAA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 3 (lower is better)
Translates to: AKVESHFHDTSNISHQGCVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp CTCTTGTTCCATCAGAAACTCAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTTGACTGCTCGACAGAA +
Preference number: 3 (lower is better)
Translates to: LLFHQKLRLLEV*ESIKMVDCSTE
Trigger: TTCTGTCGAGCAGTCAACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGATGGAACAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR GCA 72 bp AGGCAAGTAAATACTAACTACTGCGAGGTGGAAAATTaGATGAAGACCCTGCAACGTCATTCACTGAGGATC +
Preference number: 3 (lower is better)
Translates to: RQVNTNYCEVEN*MKTLQRHSLRI
Trigger: GATCCTCAGTGAATGACGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAGTAGTTAGTATTTACTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp ACATCTGACTGGTCATCACCCACTAATCACAGAAGCTaGCCCGACAAGCAAAACAAGATCTGCGTTTTAAAT +
Preference number: 3 (lower is better)
Translates to: TSDWSSPTNHRS*PDKQNKICVLN
Trigger: ATTTAAAACGCAGATCTTGTTTTGCTTGTCGGGCCAGCTTCTGTGATTAGTGGGTGATGACCAGTCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 72 bp CCAGCAAGACTTGAAGAATCTCCATTTGAGCTATGTTaGTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGA +
Preference number: 3 (lower is better)
Translates to: PARLEESPFELC*FQFKQAPDQAR
Trigger: TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTCTTCAAGTCTTGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CAA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGAATATCTGCCCGTTGCTaGTCACAGTTGTATTTTCAA +
Preference number: 3 (lower is better)
Translates to: CLKCAVQLITATRNTKKRISARC*SQLYFQ
Trigger: TTGAAAATACAACTGTGACAAGCAACGGGCAGATAT...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR TCA 72 bp TTATTCCCATTTGTAAAGCTGGTGCCCTCATTTGTCTaGGAGGGTTATTTTGAGACTAAATGCATTCGTATC +
Preference number: 3 (lower is better)
Translates to: LFPFVKLVPSFV*EGYFETKCIRI
Trigger: GATACGAATGCATTTAGTCTCAAAATAACCCTCTCAGACAAATGAGGGCACCAGCTTTACAAATGGGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 72 bp TTCAAAGTTAGTTTAAGGCAAGTAAATACTAACTACTaGGAGGTGGAAAATTGCATGAAGACCCTGCAACGT +
Preference number: 3 (lower is better)
Translates to: FKVSLRQVNTNY*EVENCMKTLQR
Trigger: ACGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAGTAGTTAGTATTTACTTGCCTTAAACTAACTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AAAGTCAGAACTTTTCTAGGCTTCCTGATACCAGAAAGACATCCATGTTTACAATCTGAGAGGGTTATTTaGAGACTAAATGCATTCGTA +
Preference number: 3 (lower is better)
Translates to: KVRTFLGFLIPERHPCLQSERVI*RLNAFV
Trigger: TACGAATGCATTTAGTCTCAAAATAACCCTCTCAGA...TTGTAAACATGGATGTCTTTCTGGTATCAGGAAGCCTAGAAAAGTTCTGACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 72 bp CAACAAATTGTAAAGAAAAAGTGTAGCAAATTATCGTaGCTTAAATGTGCTGTTCAACTAATCACTGCCACC +
Preference number: 3 (lower is better)
Translates to: QQIVKKKCSKLS*LKCAVQLITAT
Trigger: GGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCACGATAATTTGCTACACTTTTTCTTTACAATTTGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTTCTGCAAGGGCGCCATaGGGCAGCAGAGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGSARAP*GSRAPR
Trigger: GCGCGGTGCTCTGCTGCCGCATGGCGCCCTTGCAGA...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGGLTAP*PGEWLM
Trigger: CATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCC...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGGGGACGCCTGCGGCTaGCCCCTCGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: WVSLAGAPFHSVARGGREGDACG*PLGTEW
Trigger: CCACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCC...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGCTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRLVAEG*PCSDAC
Trigger: GCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAG...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCCCTGTTGGAGACGCTaGCCGCATCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGPCWRR*PHLASS
Trigger: GGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGACGACGCGTGCACGGATaGGGTGCGGCGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLTGALGGRGPSQLARGGRRVHG*GAAWVW
Trigger: CCACACCCACGCCGCACCTCATCCGTGCACGCGTCG...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGACGCCTGCAGGAGCCTaGGCATGTGTTTGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRTPAGA*ACVCGA
Trigger: CGCACCACAAACACATGCGCAGGCTCCTGCAGGCGT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGGTGCTCTGGTAGCCTaGGCTCTGCAGAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRGALVA*ALQRGK
Trigger: CTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR TCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCCTGCCCGTTGCAGATaGCGTGGGGCACGTAGACAT +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGPARCR*RGARRH
Trigger: ATGTCTACGTGCCCCACGTCATCTGCAACGGGCAGG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTCCTCGATCCTCTTGGTaGTCAGCTCCAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPPRSSW*SAPAAA
Trigger: CGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGG...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPSPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: CWVQAARVPCSRARPVTPFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGCGCGCTCCCTCCCGTTaGCGCTGGGGGACGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVRAPSR*RWGTSQ
Trigger: TTGACTCGTCCCCCAGCGTCAACGGGAGGGAGCGCG...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGGGAGCGTCCAGTAGATaGACACGCGCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRGASSR*TRASAA
Trigger: TGCTGCGCTGGCGCGTGTTCATCTACTGGACGCTCC...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCGTCGGGAAGGAGGCTaGTGGTCACCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGRREGG*WSPAAR
Trigger: TCGTGCTGCTGGTGACCATCAGCCTCCTTCCCGACG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGACGACGCGTGCACGGATaGGGTGCGGCGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGRRVHG*GAAWVW
Trigger: CCACACCCACGCCGCACCTCATCCGTGCACGCGTCG...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCTCCTGCGGAAGAGCTTaGAGGCGTAGCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGSCGRA*RRSTWP
Trigger: CGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGA...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGCGGACAGGTTGTCTCTaGTCAGGCTCCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRRTGCL*SGSRCG
Trigger: GCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCG...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGTCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGSPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGGGGGACGCCTGCGGCTaGCCCCTCGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GWNCSGDGNRRGWVGAPWGDACG*PLGTEW
Trigger: CCACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCC...CCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAGGTGCGGCGTGGGTGTaGCCAGTCCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGGAAWV*PVLLWP
Trigger: CGGCCACAGCAGGACTGGCCACACCCACGCCGCACC...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGTTCCCAGCTGGCTCGTaGCGGAAGGCTGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: WVSLAGAPFHSVARGGREFPAGS*RKAGRA
Trigger: AGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAA...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGACAGCACCGGACCCCTaGCCAAGGCTCAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRTAPDP*PRLNSG
Trigger: CCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGT...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCACTCGATGGTGGCGTaGAGTCCGCCGATATCCTCC +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGHSMVA*SPPISS
Trigger: GGAGGATATCGGCGGACTTCACGCCACCATCGAGTG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: WVSLAGAPFHSVARGGREMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: EAAGVALSSHVALPSPRGPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGACTTGGGATGGAACTaGAGTGGTGATGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPDLGWN*SGDGNR
Trigger: GCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTC...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CWVQAARVPCSRARPVTPAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRSRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGLPRSV*SSQLLA
Trigger: AGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGGCGGTCCCGAGGCTGTaGGCACCCATTCTGGACTCT +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPAVPRL*APILDS
Trigger: AGAGTCCAGAATGGGTGCGCACAGCCTCGGGACCGC...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000419631.1
CDS-3UTR GCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGGCGGTCCCGAGGCTGTaGGCACCCATTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRAVPRL*APILLV
Trigger: AACAAGCAGAATGGGTGCGCACAGCCTCGGGACCGC...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATGCAGGCGTAGCACGTaGCCGCGGCCGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPCRRST*PRPSPS
Trigger: AGATGGAGACGGCCGCGGCCACGTGCTACGCCTGCA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPDGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGT +
Preference number: 4 (lower is better)
Translates to: WVSLAGAPFHSVARGGREKESPA*GHGDEG
Trigger: ACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTT...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTCTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPLLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTGCATGTGTACGTGTaGGAGCTCACGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPVHVYV*ELTCGR
Trigger: TCTCCCACACGTGAGCTCCCACACGTACACATGCAC...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGAGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: GLTGALGGRGPSQLARGGETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGTCAGCTCCAGCAGCTaGGTGTTCCTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGVSSSS*VFLRKS
Trigger: GCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGAC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCGGCGCAGGACCGTCTTaGTCAGCTCGAACAGGACGT +
Preference number: 4 (lower is better)
Translates to: CWVQAARVPCSRARPVTPGAGPS*SARTGR
Trigger: ACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCC...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 4 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGATGAATGTGCACGTGTaGAGGAGGCTGCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRMNVHV*RRLHVC
Trigger: ACAAACGTGCAGCCTCCTGCACACGTGCACATTCAT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTTGTGTCCCACGTAGATaGTCCTGCTGTCCACCCAAT +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPCVPRR*SCCPPN
Trigger: ATTGGGTGGACAGCAGGACCATCTACGTGGGACACA...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATTCACCTGGACGGTGTaGCAGAGACAGAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPFTWTV*QRQRAR
Trigger: CCGGGCCCTCTGTCTCTGCCACACCGTCCAGGTGAA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGCAGCAGGGCATTCTTaGCGACGTCCCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGAAGHS*RRPCTG
Trigger: CCCTGTACAGGGACGTCGCCAAGAATGCCCTGCTGC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTGCGGCCCTTCCCAGCTaGCTCGTGGCGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PVCHPRQPETGSGARTPPAALPS*LVAEGW
Trigger: CCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGC...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp ACTTCTGCGGCAGGGCTGGAAGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: TSAAGLEAAGVA*SSHVALPSPRG
Trigger: GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAGAAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp CTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: LSSTSETPSGFH*PEPRSTAWRGA
Trigger: CGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAGGCACAGGACTTTCTTaGGGACGTCGGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPGTGLS*GRREGG
Trigger: GCCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCC...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGGCAGGGACTGGGTGTaGATCAGTGACCGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGGRDWV*ISDRVS
Trigger: AGAGACACGGTCACTGATTCACACCCAGTCCCTGCC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGGCGCAGGACCGTCTTaGTCAGCTCGAACAGGACGT +
Preference number: 4 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLGAGPS*SARTGR
Trigger: ACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGAGCAGAGCACCGCGCTaGAGCTCCGGCAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVSRAPR*SSGRFP
Trigger: TGGAAATCTGCCGGAGCTGCAGCGCGGTGCTCTGCT...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTTCTGCAAGGGCGCCATaGGGCAGCAGAGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGSARAP*GSRAPR
Trigger: GCGCGGTGCTCTGCTGCCGCATGGCGCCCTTGCAGA...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTACGTCAATGCCAACATaGTGCTCCATGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPTSMPT*CSMRLY
Trigger: GTACAGCCTCATGGAGCAGCATGTTGGCATTGACGT...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACC +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKRAEVR*CLLGST
Trigger: GGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGCTCCAGCGTTGGTGGTaGTTTCCTGAAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRLQRWW*FPERQQ
Trigger: CTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRLPRSV*SSQLLA
Trigger: AGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAG...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGTGTATTCACGCCTaGAGGAGCCTGCGCATGTGT +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGVCIHA*RSLRMC
Trigger: ACACATGCGCAGGCTCCTGCAGGCGTGAATACACAC...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGCCTCGATCCTCTTGGTaGTCAGCTCCAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVPRSSW*SAPAAA
Trigger: CGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGG...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCCAGGCCGCGAGTGTCACCTGCTGAGAGTGGGAGCTGTACCAGGCGGCCGAGGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRPRVSPAESGSCTRRPRLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...CCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGCTCCTCCAGCGTTGGTaGTGCTTTCCTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRLLQRW*CFPERQ
Trigger: CTGCCTTTCAGGAAAGCACCACCAACGCTGGAGGAG...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACACCTGCTGTGGCCGCCTaGTATAGGGCTGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETPAVAA*YRAEPR
Trigger: CCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGG...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGGTGCGGCGTGGGTGTaGCCAGTCCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHGAAWV*PVLLWP
Trigger: CGGCCACAGCAGGACTGGCCACACCCACGCCGCACC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAACTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKLVAEG*PCSDAC
Trigger: GCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAG...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTALVAEG*PCSDAC
Trigger: GCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGTGGACTGACGGCTCCGTGCCCTGGCGAGTGGCTGATGGACATCCTGGCACTGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGG +
Preference number: 4 (lower is better)
Translates to: QWTDGSVPWRVADGHPGTDAGRI*PPPSRR
Trigger: CCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTC...AGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGCCCTGTTGGAGACGCTaGCCGCATCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARPCWRR*PHLASS
Trigger: GGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGG...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGACAGCACCGGACCCCTaGCCAAGGCTCAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRTAPDP*PRLNSG
Trigger: CCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGT...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
3UTR CAA 72 bp GCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGCCACTGGTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ARRVGQQNVPPA*SRMPRGHWCGS
Trigger: TGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCCCAAGCTGGCGGTGGTaGCGTGGCACGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFPSWRW*RGTSHL
Trigger: GAGATGGGACGTGCCACGTCACCACCGCCAGCTTGG...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGCAACATGCTGCTCCATaGGGCTGTACAGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPQHAAP*GCTGGW
Trigger: CCATCCTCCTGTACAGCCTCATGGAGCAGCATGTTG...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACGTCGGGAAGGAGGCTaGTGGTCACCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPRREGG*WSPAAR
Trigger: TCGTGCTGCTGGTGACCATCAGCCTCCTTCCCGACG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAATGGAACTGCAGTGGTaGTGGGAACCGCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPMELQW*WEPPRM
Trigger: CATCCTCGGCGGTTCCCATCACCACTGCAGTTCCAT...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTAPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGATGTGGGGACGAGGTaGCGGGATGAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLDVGTR*RDEGTW
Trigger: CCACGTCCCCTCATCCCGTCACCTCGTCCCCACATC...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGGHGYE*AWSQKP
Trigger: TGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGACTTGGGATGGAACTaGAGTGGTGATGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGDLGWN*SGDGNR
Trigger: GCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAACCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HRLRTIHHTSIPTRDLGQRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...CTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGTGTGTGTGCATGTGTaGAGTAGAAGCTCATACGTC +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGVCVHV*SRSSYV
Trigger: GACGTATGAGCTTCTACTGCACACATGCACACACAC...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGCGGAAGGCTGGCCGTaGTCCGACGCGTGCACGGAT +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHAEGWP*SDACTD
Trigger: ATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCGTCCGGCGATTTCCTaGGGCCGTCTACGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSRPAIS*GRLRCH
Trigger: ATGACAGCGTAGACGGCCCCAGGAAATCGCCGGACG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCCAGGCCGCGAGTGTCACCTGCTGAGAGTGGGAGCTGTACCAGGCGGCCGAGGACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRPRVSPAESGSCTRRPRTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...CCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGGTGGGAGCTCACGTGTaGGAGACGTGTGTTTACATG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRVGAHV*ETCVYM
Trigger: CATGTAAACACACGTCTCCCACACGTGAGCTCCCAC...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAAGCAAGCCGAGCGGATaGTCACCCTGTTGGAGACGC +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGSKPSG*SPCWRR
Trigger: GCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGCT...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
3UTR CAA 72 bp TGCTTGTTCGCCCTGTCTGCTCAGACACAGGCTGGGTaGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: CLFALSAQTQAG*TGALGGRGPSQ
Trigger: CTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
CDS-3UTR TCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCTTTTTCTCTCGATCTTaGAGGGCCACTTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGFFSRS*RATLAA
Trigger: GGCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAA...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCGCCAATTGCTAACGTaGTTGGGTGCTCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGRQLLT*LGALLK
Trigger: TTTCAAAAGAGCACCCAATCACGTTAGCAATTGGCG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGAACTGGTATAAAAACTaGGGGAAGATGAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRNWYKN*GKMKQT
Trigger: CGTCTGCTTCATCTTCCCTCAGTTTTTATACCAGTT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAGATGTGGGGACGAGGTaGCGGGATGAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKDVGTR*RDEGTW
Trigger: CCACGTCCCCTCATCCCGTCACCTCGTCCCCACATC...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PVCHPRQPETGSGARTPPDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAGTGCATACACGTGTGTaGGAGCAAGCCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPVHTRV*EQACRS
Trigger: GCTCCTACAGGCTTGCTCTCACACACGTGTATGCAC...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPERQEG*ILSRGP
Trigger: GGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR TCA 90 bp GGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: GWNCSGDGNRRGWVGAPWERQEG*ILSRGP
Trigger: GGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTC...CCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR GCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGCCTGCACAGTATCTGTaGACGAGCGTCCGCACGAGG +
Preference number: 4 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWPAQYL*TSVRTR
Trigger: CCTCGTGCGGACGCTCGTGCACAGATACTGTGCAGG...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAAGGTCGGGCTGGGGCTaGTCACACTCGATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKRSGWG*SHSMVA
Trigger: CGCCACCATCGAGTGTGAGCAGCCCCAGCCCGACCT...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGGCCACTTTGGCAGCCTaGAGCAGCTTACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPATLAA*SSLQMP
Trigger: AGGCATTTGTAAGCTGCTGCAGGCTGCCAAAGTGGC...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTTCCTGCGGAAGAGCTTaGAGGCGTAGCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHASCGRA*RRSTWP
Trigger: CGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGA...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGCAGCTGCGTGTTCCTaGGGAAGAGCTTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPAAACS*GRACRR
Trigger: ACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCTCGAACAGGACGTCGTaGAGGCTCTGCTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSSNRTS*RLCSSI
Trigger: GATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGA...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCACTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRALDSLC*CWPQLP
Trigger: CGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAG...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRLDSLC*CWPQLP
Trigger: CGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAG...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ETETQPAPTHRAGGLGRNRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...GTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACC +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLRAEVR*CLLGST
Trigger: GGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 4 (lower is better)
Translates to: CWVQAARVPCSRARPVTPVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGCTCATACGTCTCTCTaGTGTGCATACACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGAHTSL*CAYTCV
Trigger: CACACACGTGTATGCACAGCAGAGAGACGTATGAGC...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCTGCTCACACTCGATaGTGGCGTGAAGTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPAAHTR*WREVRR
Trigger: TCGGCGGACTTCACGCCACCATCGAGTGTGAGCAGC...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGGTCAGGCTCCCGCTGTaGCGCAGGACCGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTAVRLPL*RRTVLL
Trigger: GAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGAC...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCCCACACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGTCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SHTGPRAAVTWDGTAVVMSPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...CATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHATLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGTGGACTGACGGCTCCGTGCCCTGGCGAGTGGCTGATGGACATCCTGGCACTGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: QWTDGSVPWRVADGHPGTDGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...AGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 4 (lower is better)
Translates to: CGIHMWATMGPWTALLSQRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTARGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPLLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRLGNTL*VSLAGA
Trigger: GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAG...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGGCACACGCGTGTCTGTaGTATGTGTACACGTGCATG +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPAHACL*YVYTCM
Trigger: CATGCACGTGTACACATACCACAGACACGCGTGTGC...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCGAGCCTGTGCGTGTTTaGGGTGTGTCCATGTGCATC +
Preference number: 4 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPEPVRV*GVSMCI
Trigger: GATGCACATGGACACACCCCAAACACGCACAGGCTC...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPFSLRG*TSLKGK
Trigger: CTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCCCACACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGTGCGGCGTGGGTGTaGCCAGTCCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SHTGPRAAVTWDGTAVVMGAAWV*PVLLWP
Trigger: CGGCCACAGCAGGACTGGCCACACCCACGCCGCACC...CATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGTTCCCAGCTGGCTCGTaGCGGAAGGCTGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLFPAGS*RKAGRA
Trigger: AGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAA...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGCGGCCCTTCCCAGCTaGCTCGTGGCGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVAALPS*LVAEGW
Trigger: CCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGC...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCACAGGCTGGGTTGACTaGGGCTTTAGGCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRTGWVD*GFRRPR
Trigger: CCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACCGCAGGGAAACCACTCCCTCCCTCGAGACGGTGTaGCCTGCTTGTTCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: APTHRAGGLGRNRRETTPSLETV*PACSPC
Trigger: ACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGA...GGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGG +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTADAGRI*PPPSRR
Trigger: CCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACACTCGATGGTGGCGTaGAGTCCGCCGATATCCTCC +
Preference number: 4 (lower is better)
Translates to: PCPVCHPRQPETGSGARTHSMVA*SPPISS
Trigger: GGAGGATATCGGCGGACTTCACGCCACCATCGAGTG...TGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGTTTTTCTCTCGATCTTaGAGGGCCACTTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGFFSRS*RATLAA
Trigger: GGCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAA...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGTCCTGCATATCTGCTaGAAGTCCGGACAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLVLHIC*KSGQVV
Trigger: GACAACCTGTCCGGACTTTCAGCAGATATGCAGGAC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCAACATGCTGCTCCATaGGGCTGTACAGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATQHAAP*GCTGGW
Trigger: CCATCCTCCTGTACAGCCTCATGGAGCAGCATGTTG...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGAGCGTCCAGTAGATaGACACGCGCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRGASSR*TRASAA
Trigger: TGCTGCGCTGGCGCGTGTTCATCTACTGGACGCTCC...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TTGGGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGGGCACAGGACTTTCTTaGGGACGTCGGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGWNCSGDGNRRGWVGAPGTGLS*GRREGG
Trigger: GCCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCC...CGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHAASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGTTGGTGGTGCTTTCCTaGAAGGCAGCAGTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVLVVLS*KAAVSA
Trigger: CGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAA...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAAGGTCGGGCTGGGGCTaGTCACACTCGATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQRSGWG*SHSMVA
Trigger: CGCCACCATCGAGTGTGAGCAGCCCCAGCCCGACCT...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAATCGGAGCCCCTCCACTaGGTTACGCTCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKSEPLH*VTLHSG
Trigger: GCCAGAGTGGAGCGTAACGCAGTGGAGGGGCTCCGA...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACTCGGAGCCCCTCCACTaGGTTACGCTCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHSEPLH*VTLHSG
Trigger: GCCAGAGTGGAGCGTAACGCAGTGGAGGGGCTCCGA...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGACGTCGTGCAGGCTCTaGTCCTCGATCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARTSCRL*SSILLV
Trigger: CACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGT...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGTCGAACAGGACGTCGTaGAGGCTCTGCTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: QQPQCWVQAARVPCSRARSNRTS*RLCSSI
Trigger: GATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGA...CCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGACTTGGGATGGAACTaGAGTGGTGATGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRDLGWN*SGDGNR
Trigger: GCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCTGGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RLRTIHHTSIPTRDLGQLGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...CAGCTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHAPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSLPRSV*SSQLLA
Trigger: AGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGAACATACAGAGAATCTaGCCCCGCTACAGGTGTTAC +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRNIQRI*PRYRCY
Trigger: GTAACACCTGTAGCGGGGGCAGATTCTCTGTATGTT...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAGTGTGTAGGAGCCTGTaGGTGTTTGGGGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGVCRSL*VFGVCP
Trigger: TGGACACACCCCAAACACGCACAGGCTCCTACACAC...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGAGCAAGGAGGCAGGATaGAGTGCAGGACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALSKEAG*SAGHQD
Trigger: GTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCT...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCCCGTGCTCCGACGCGTaGACGGATGAGGTGCGGCGT +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTPCSDA*TDEVRR
Trigger: ACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGG...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTCGAGACGGTGTGGCCTaGTTGTTCGCCCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGRDGVA*LFALSA
Trigger: AGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCG...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGCGGACAGGTTGTCTCTaGTCAGGCTCCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGRTGCL*SGSRCG
Trigger: GCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCG...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCTCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGASPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCTGCTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: VCSSQPSICLPALAPAKSGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...TGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGIGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PVCHPRQPETGSGARTPPCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CGIHMWATMGPWTALLSQLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTALHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTADGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 4 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGAGTAAAGGACGCACCCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGLLSKGRTPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGTGGGAGCTCACGTGTaGGAGACGTGTGTTTACATG +
Preference number: 4 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLVGAHV*ETCVYM
Trigger: CATGTAAACACACGTCTCCCACACGTGAGCTCCCAC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGATGCTCAGACACAGGCTaGGTTGACTGGGGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGCSDTG*VDWGFR
Trigger: CCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCA...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCGGATGGTCACCCTGTTaGAGACGCTGGCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFGWSPC*RRWPHL
Trigger: CAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCC...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGACAGGATGGTCACCCTGTTaGAGACGCTGGCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: WNCSGDGNRRGWVGAPWTGWSPC*RRWPHL
Trigger: CAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCC...TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCGGTGCTCTGGTAGCCTaGGCTCTGCAGAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFGALVA*ALQRGK
Trigger: CTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACC...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGACAGGTGCTCTGGTAGCCTaGGCTCTGCAGAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: WNCSGDGNRRGWVGAPWTGALVA*ALQRGK
Trigger: CTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACC...TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR TCA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGGTCCCAGCTCTTCATTaGGGTCCGACGTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARVPALH*GPTCSP
Trigger: TGGTGAACACGTCGGACCTCAATGAAGAGCTGGGAC...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCTCGTCGGGCGAGGATaGGATGTACACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRLVGRG*DVHTGF
Trigger: AAATCCTGTGTGTACATCTCATCCTCGCCCGACGAG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGGCCTTCCTTGCCGATaGCACCTATGCCCACGTGCG +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSGLPCR*HLCPRA
Trigger: CGCACGTGGGCATAGGTGTCATCGGCAAGGAAGGCC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGGGGTCGGGTCTCTCTTaGGCACGTCAATGCCAACAT +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGGSGLS*ARQCQH
Trigger: ATGTTGGCATTGACGTGCTCAAGAGAGACCCGACCC...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGAGTAAAGGACGCACCGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGLLSKGRTALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: TVSTGLGPSITRAFPHGTPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...GGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGTCAGAGGTACATGGTaGCTATCTCCACACAGGCAG +
Preference number: 4 (lower is better)
Translates to: EAAGVALSSHVALPSPRGVRGTW*LSPHRQ
Trigger: CTGCCTGTGTGGAGATAGTCACCATGTACCTCTGAC...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCATGTACATATGTGAGTaGTCCTGTGTGCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPMYICE*SCVQAP
Trigger: GGGGGCTTGCACACAGGATCACTCACATATGTACAT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHKRGEF*VAVPRL
Trigger: CAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGAGCCGAGGAACTTCTaGATCTCGACCGTGACGTAC +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALEPRNF*ISTVTY
Trigger: GTACGTCACGGTCGAGATGCAGAAGTTCCTCGGCTC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAGCCACTTTGGCAGCCTaGAGCAGCTTACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRAATLAA*SSLQMP
Trigger: AGGCATTTGTAAGCTGCTGCAGGCTGCCAAAGTGGC...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAGTCAGCTCCAGCAGCTaGGTGTTCCTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKVSSSS*VFLRKS
Trigger: GCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGAC...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAAGAGCTCCCTGTAGTTaGCGGAACTCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPRAPCS*RNSRLL
Trigger: GAGAAGACGGGAGTTCCGGCAACTACAGGGAGCTCT...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGIRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACACCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAATGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: CGIHMWATMGPWTALLSQSRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACC +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESRAEVR*CLLGST
Trigger: GGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATCTGCTCAAGCCAGTTaGTCGCTACCCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPSAQAS*SLPSSL
Trigger: CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACACGCCTGCAGGAGCCTaGGCATGTGTTTGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHTPAGA*ACVCGA
Trigger: CGCACCACAAACACATGCGCAGGCTCCTGCAGGCGT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGCGGAAGGCTGGCCGTaGTCCGACGCGTGCACGGAT +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAAEGWP*SDACTD
Trigger: ATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGAATGCGTTTTATGGCTaGATTCTCCATCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRNAFYG*ILHPSW
Trigger: CCAGCTTGGATGGAGAATCCAGCCATAAAACGCATT...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCATCATCGTCTTTCACCTaGACGGTGTGGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRASSSFT*TVWQRQ
Trigger: CTGTCTCTGCCACACCGTCCAGGTGAAAGACGATGA...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGTCATCGTCTTTCACCTaGACGGTGTGGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: WPCPPTWHCLLHEAAGDGSSSFT*TVWQRQ
Trigger: CTGTCTCTGCCACACCGTCCAGGTGAAAGACGATGA...CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGTCTCTCTGTTGCTGTTaGCCACAGCTGCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLSLCCC*PQLPAQ
Trigger: CTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGA...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTATGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGACCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSDGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: HRAAGVSEAATSPPGPALCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAG +
Preference number: 4 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTHPEQR*TDPKTK
Trigger: CTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTG...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHALGNTL*VSLAGA
Trigger: GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAG...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTGGGGACGCCTGCGGCTaGCCCCTCGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCGDACG*PLGTEW
Trigger: CCACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCC...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGGTGGGAGCTCACGTGTaGGAGACGTGTGTTTACATG +
Preference number: 4 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGVGAHV*ETCVYM
Trigger: CATGTAAACACACGTCTCCCACACGTGAGCTCCCAC...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGTTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTFSLRG*TSLKGK
Trigger: CTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAA...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCACAGGCTGGGTTGACTaGGGCTTTAGGCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTTGWVD*GFRRPR
Trigger: CCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGT...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR CAA 72 bp TTAAACGCTCAGCAAGCCGAGCGGATGGTCACCCTGTaGGAGACGCTGGCCGCATCTGGCCTCCTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: LNAQQAERMVTL*ETLAASGLLPR
Trigger: TCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGCTGAGCGTTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
CDS-3UTR TCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCATCCGACTCCGTTTTCTaGTTATACCACGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRASDSVF*LYHGSS
Trigger: GGATGAGCCGTGGTATAATCAGAAAACGGAGTCGGA...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTTCTGCATCTCGACCGTaGCGTACATGGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHASASRP*RTWTQG
Trigger: TCCCTGTGTCCATGTACGTCACGGTCGAGATGCAGA...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACTCGTCGGGCGAGGATaGGATGTACACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPLVGRG*DVHTGF
Trigger: AAATCCTGTGTGTACATCTCATCCTCGCCCGACGAG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGTCCTGCATATCTGCTaGAAGTCCGGACAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPVLHIC*KSGQVV
Trigger: GACAACCTGTCCGGACTTTCAGCAGATATGCAGGAC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCTTCCAGAATCATGCTaGCATCATTTGCACCATCGC +
Preference number: 4 (lower is better)
Translates to: QCWVQAARVPCSRARPVTLPESC*HHLHHR
Trigger: GCGATGGTGCAAATGATGTCAGCATGATTCTGGAAG...GGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCCGTCGGGAAGGAGGCTaGTGGTCACCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTRREGG*WSPAAR
Trigger: TCGTGCTGCTGGTGACCATCAGCCTCCTTCCCGACG...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCCGTCGGGAAGGAGGCTaGTGGTCACCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESRREGG*WSPAAR
Trigger: TCGTGCTGCTGGTGACCATCAGCCTCCTTCCCGACG...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCATGGAACTGCAGTGGTaGTGGGAACCGCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRMELQW*WEPPRM
Trigger: CATCCTCGGCGGTTCCCATCACCACTGCAGTTCCAT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 4 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGAGGGACAGGTGCTCTGGTAGCCTGGGCTCTTGTTCCATCAGAAACTCAGGCTGATGTGGGGACGAGGTaGCGGGATGAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: RGTGALVAWALVPSETQADVGTR*RDEGTW
Trigger: CCACGTCCCCTCATCCCGTCACCTCGTCCCCACATC...AGCCTGAGTTTCTGATGGAACAAGAGCCCAGGCTACCAGAGCACCTGTCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR TCA 90 bp TCCAGGCCGCGAGTGTCACCTGCTGAGAGTGGGAGCTGTACCAGGCGGCCGAGGATGTGGACATGGCTATaGGTGAGCGTGGAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: SRPRVSPAESGSCTRRPRMWTWL*VSVEPK
Trigger: TTTTGGCTCCACGCTCACTCATAGCCATGTCCACAT...CCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTGTGCATACACGTGTGTaGGAGCAAGCCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGVHTRV*EQACRS
Trigger: GCTCCTACAGGCTTGCTCTCACACACGTGTATGCAC...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCTCGGAGCCCCTCCACTaGGTTACGCTCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESSEPLH*VTLHSG
Trigger: GCCAGAGTGGAGCGTAACGCAGTGGAGGGGCTCCGA...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCCACTTTGGCAGCCTaGAGCAGCTTACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPATLAA*SSLQMP
Trigger: AGGCATTTGTAAGCTGCTGCAGGCTGCCAAAGTGGC...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGTCAGCTCCAGCAGCTaGGTGTTCCTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAVSSSS*VFLRKS
Trigger: GCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGAC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACACGTCGTGCAGGCTCTaGTCCTCGATCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHTSCRL*SSILLV
Trigger: CACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTCGAACAGGACGTCGTaGAGGCTCTGCTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRSNRTS*RLCSSI
Trigger: GATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGA...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAGGCGCAGGACCGTCTTaGTCAGCTCGAACAGGACGT +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGGAGPS*SARTGR
Trigger: ACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCC...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAAGCAGAGCACCGCGCTaGAGCTCCGGCAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQSRAPR*SSGRFP
Trigger: TGGAAATCTGCCGGAGCTGCAGCGCGGTGCTCTGCT...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCTAACGTGATTGGGTaGTCTTTTGAAAATTTGATT +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRANVIG*SFENLI
Trigger: AATCAAATTTTCAAAAGAGCACCCAATCACGTTAGC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGATCAATGCCAACATGCTaGTCCATGAGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGSMPTC*SMRLYR
Trigger: CCTGTACAGCCTCATGGAGCAGCATGTTGGCATTGA...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCACCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQSRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TTGGGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGGTGTGTAGGAGCCTGTaGGTGTTTGGGGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGWNCSGDGNRRGWVGAPVCRSL*VFGVCP
Trigger: TGGACACACCCCAAACACGCACAGGCTCCTACACAC...CGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAATTCACCCCCGGGGCCTaGTCTGCAAAGCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQFTPGA*SAKPRH
Trigger: ATGTCTGGGCTTTGCAGAGCAGGCCCCGGGGGTGAA...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACGAGACGGTGTGGCCTaGTTGTTCGCCCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQRDGVA*LFALSA
Trigger: AGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGACTTTTATTCTTTATTaGAAGCAGATTCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRTFILY*KQIQVS
Trigger: GGAGACCTGAATCTGCTTGCAATAAAGAATAAAAGT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGGTCTGGGTATCTCTGTaGGATGTAGGCCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: HRAAGVSEAATSPPGPALVWVSL*DVGLCA
Trigger: GGCGCAGAGGCCTACATCCCACAGAGATACCCAGAC...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGAATGACAAAGAAGAGTaGAAGTCCGCTTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGNDKEE*KSACHW
Trigger: CCAGTGACAAGCGGACTTCCACTCTTCTTTGTCATT...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCGGACAGGTTGTCTCTaGTCAGGCTCCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HRLRTIHHTSIPTRDLGQRTGCL*SGSRCG
Trigger: GCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCG...CTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGCAGCAGGGCATTCTTaGCGACGTCCCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQAAGHS*RRPCTG
Trigger: CCCTGTACAGGGACGTCGCCAAGAATGCCCTGCTGC...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCTGCTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCACTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VCSSQPSICLPALAPAKSLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...TGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: AKPRHSARRGTLHPREAWPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAAGGGGACGCCTGCGGCTaGCCCCTCGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQGDACG*PLGTEW
Trigger: CCACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCC...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGGCACACGCGTGTCTGTaGTATGTGTACACGTGCATG +
Preference number: 4 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTAHACL*YVYTCM
Trigger: CATGCACGTGTACACATACCACAGACACGCGTGTGC...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCTGGGAACTCATTTGTaGTGTACACATGAATGTGCA +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGLGTHL*CTHECA
Trigger: TGCACATTCATGTGTACACCACAAATGAGTTCCCAG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCGAGCCTGTGCGTGTTTaGGGTGTGTCCATGTGCATC +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFEPVRV*GVSMCI
Trigger: GATGCACATGGACACACCCCAAACACGCACAGGCTC...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGCTGGGAGCTCGTTTGTaGTGTACACGTGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: GWNCSGDGNRRGWVGAPWLGARL*CTRVCM
Trigger: CATGCACACACGTGTACACCACAAACGAGCTCCCAG...CCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTGCGGCCCTTCCCAGCTaGCTCGTGGCGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCAALPS*LVAEGW
Trigger: CCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGC...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGTCCCTCGAGACGGTGTaGCCTGCTTGTTCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: AKPRHSARRGTLHPREAWSLETV*PACSPC
Trigger: ACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGA...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTGTGCGCACCCATTCTaGACTCTCTCTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRCAHPF*TLSVAV
Trigger: AACAGCAACAGAGAGAGTCCAGAATGGGTGCGCACA...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000419631.1
3UTR CAA 72 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTaGAGTAAAGGACGCACCACCATGGCTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGL*SKGRTTMAPPH
Trigger: GTGAGGTGGAGCCATGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp AAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAACCACTCCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: KLSQPQHTGQAG*DVTAGKPLPDE
Trigger: CTCATCTGGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGCTTGCCGTGCTGAATaGAATGAACAGGACACTGGT +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKACRAE*NEQDTG
Trigger: ACCAGTGTCCTGTTCATTTCATTCAGCACGGCAAGC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGCGCGCTCCCTCCCGTTaGCGCTGGGGGACGAGTCAA +
Preference number: 4 (lower is better)
Translates to: QEYQQMPNASGPQLRSARRAPSR*RWGTSQ
Trigger: TTGACTCGTCCCCCAGCGTCAACGGGAGGGAGCGCG...CCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTATGGAACTGCAGTGGTaGTGGGAACCGCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAMELQW*WEPPRM
Trigger: CATCCTCGGCGGTTCCCATCACCACTGCAGTTCCAT...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCTGTGACTTGGGATGGAGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PSHEHSHTGPRAAVTWDGETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...TCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 4 (lower is better)
Translates to: TCTVSTGLGPSITRAFPHPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...GTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGITPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGCAACGTCATTCACTaGGGATCTTCTCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPCNVIH*GSSHPF
Trigger: AAAAGGATGAGAAGATCCTCAGTGAATGACGTTGCA...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGGCAGGGACTGGGTGTaGATCAGTGACCGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSGRDWV*ISDRVS
Trigger: AGAGACACGGTCACTGATTCACACCCAGTCCCTGCC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGATGTACATATGTGAGTaGTCCTGTGTGCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGMYICE*SCVQAP
Trigger: GGGGGCTTGCACACAGGATCACTCACATATGTACAT...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCGTACATGTACATATGTaGGTGATCCTGTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPVHVHM*VILCAS
Trigger: GCTTGCACACAGGATCACTCACATATGTACATGTAC...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCGAAAGGGCTCACTCTaGCACATGTATTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRRKGSL*HMYFST
Trigger: TGTGCTGAAATACATGTGGCAGAGTGAGCCCTTTCG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGACGTCGTGCAGGCTCTaGTCCTCGATCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AKPRHSARRGTLHPREAWTSCRL*SSILLV
Trigger: CACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGT...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGCTGTTGGCCACAGCTaGCGGCACAGGACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSAVGHS*RHRTFL
Trigger: CAAGAAAGTCCTGTGCCGGCAGCTGTGGCCAACAGC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAGCTGTTGGCCACAGCTaGCGGCACAGGACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGAVGHS*RHRTFL
Trigger: CAAGAAAGTCCTGTGCCGGCAGCTGTGGCCAACAGC...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLGLTAP*PGEWLM
Trigger: CATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCC...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGTCTGCTCAAGCCAGTTaGTCGCTACCCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALSAQAS*SLPSSL
Trigger: CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGA...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGTCTGCTCAAGCCAGTTaGTCGCTACCCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTSAQAS*SLPSSL
Trigger: CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGA...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TCCAGGCCGCGAGTGTCACCTGCTGAGAGTGGGAGCTGTACCAGGCGGCCGAGGAACATACAGAGAATCTaGCCCCGCTACAGGTGTTAC +
Preference number: 4 (lower is better)
Translates to: SRPRVSPAESGSCTRRPRNIQRI*PRYRCY
Trigger: GTAACACCTGTAGCGGGGGCAGATTCTCTGTATGTT...CCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGTATTGTGTAGGAGCATaGACACGCGTGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRYCVGA*TRVSVV
Trigger: TACCACAGACACGCGTGTGCATGCTCCTACACAATA...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGTACGTCTCTCTGCTGTaGATACACGTGTGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTYVSLL*IHVCES
Trigger: GCTCTCACACACGTGTATGCACAGCAGAGAGACGTA...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGACACCAGGACAGTGTaGACTTGTTTGTGGCACATG +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPDTRTV*TCLWHM
Trigger: CATGTGCCACAAACAAGTGCACACTGTCCTGGTGTC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGGCTCACACTCGATGGTaGCGTGAAGTCCGCCGATAT +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGAHTRW*REVRRY
Trigger: ATATCGGCGGACTTCACGCCACCATCGAGTGTGAGC...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGCTGCTCACACTCGATaGTGGCGTGAAGTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVAAHTR*WREVRR
Trigger: TCGGCGGACTTCACGCCACCATCGAGTGTGAGCAGC...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGGTAAAGCCAAGTCTCTaGACACCTTCGACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HRAAGVSEAATSPPGPALVKPSL*TPSTSA
Trigger: GGCGCTGGTCGAAGGTGTCCAGAGACTTGGCTTTAC...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCAGGACCGGACAGGTTGTCTCTaGTCAGGCTCCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RFPRVTTRKTLVPQLPQDRTGCL*SGSRCG
Trigger: GCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCG...GTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACCTGTTCCTGGCAGCCTaGCGGCCTTCCTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHLFLAA*RPSLPM
Trigger: CATCGGCAAGGAAGGCCGCCAGGCTGCCAGGAACAG...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAATCTCTCTGTTGCTGTTaGCCACAGCTGCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQSLCCC*PQLPAQ
Trigger: CTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGA...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGTCGACAGAAAGGCACTaGCTCTTAGTCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALSTERH*LLVWTL
Trigger: GAGAGTCCAGACTAAGAGCCAGTGCCTTTCTGTCGA...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKRAAVT*DGTAVV
Trigger: CACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCT...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RKRHVHSLHRLRTIHHTSPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...GCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACCTCCTCCAGCGTTGGTaGTGCTTTCCTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHLLQRW*CFPERQ
Trigger: CTGCCTTTCAGGAAAGCACCACCAACGCTGGAGGAG...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACCTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHLLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: HRAAGVSEAATSPPGPALLLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGCCTGCTGTGGCCGCCTaGTATAGGGCTGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLPAVAA*YRAEPR
Trigger: CCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGG...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTGCTCAGACACAGGCTaGGTTGACTGGGGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRCSDTG*VDWGFR
Trigger: CCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCA...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCAGCAAGCCGAGCGGATaGTCACCCTGTTGGAGACGC +
Preference number: 4 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGISKPSG*SPCWRR
Trigger: GCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGCT...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
3UTR CAA 72 bp TCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTaGGTGTTGACCCCTCCACGGGGACAGAGGATGTCT +
Preference number: 4 (lower is better)
Translates to: SARDRFWCTNTT*VLTPPRGQRMS
Trigger: AGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGGTCACTGTAAACGTTaGTGCGACCCACGAACTTGT +
Preference number: 4 (lower is better)
Translates to: PLVWLNNHSAGSRRPGCHGHCKR*CDPRTC
Trigger: ACAAGTTCGTGGGTCGCATCAACGTTTACAGTGACC...ATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCCATGTTGTTTTCCGTaGGGGTGCCGGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAPCCFP*GCRSCL
Trigger: CAGACAAGACCGGCACCCTCACGGAAAACAACATGG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGTGGACTGACGGCTCCGTGCCCTGGCGAGTGGCTGATGGACATCCTGGCACTCGATGCAGCACTCCTTaGACTCCATGTTGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: QWTDGSVPWRVADGHPGTRCSTP*TPCCFP
Trigger: CGGAAAACAACATGGAGTTCAAGGAGTGCTGCATCG...AGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCATTAATTTAACAATCTaGGCCTTCTGCAAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSINLTI*AFCKGA
Trigger: GGCGCCCTTGCAGAAGGCTCAGATTGTTAAATTAAT...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGGGCCTTCCTTGCCGATaGCACCTATGCCCACGTGCG +
Preference number: 4 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWGLPCR*HLCPRA
Trigger: CGCACGTGGGCATAGGTGTCATCGGCAAGGAAGGCC...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGAGTAAAGGACGCACCGGGTCGGGTCTCTCTTaGGCACGTCAATGCCAACAT +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGLLSKGRTGSGLS*ARQCQH
Trigger: ATGTTGGCATTGACGTGCTCAAGAGAGACCCGACCC...GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGACATCCTCTGGTAGTTaGGGAACGGCCAGATCACTC +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGTSSGS*GTARSL
Trigger: GAGTGATCTGGCCGTTCCTCAACTACCAGAGGATGT...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTACATCCTCTGGTAGTTaGGGAACGGCCAGATCACTC +
Preference number: 4 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRTSSGS*GTARSL
Trigger: GAGTGATCTGGCCGTTCCTCAACTACCAGAGGATGT...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGACATCCTCTGGTAGTTaGGGAACGGCCAGATCACTC +
Preference number: 4 (lower is better)
Translates to: CGIHMWATMGPWTALLSQTSSGS*GTARSL
Trigger: GAGTGATCTGGCCGTTCCTCAACTACCAGAGGATGT...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGGACAGCATCTGGATaGACACGTAGTACATCCTCT +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGWTASG*TRSTSS
Trigger: AGAGGATGTACTACGTGTTCATCCAGATGCTGTCCA...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: RVESSPFCLLKPVARYPHALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...ATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTGATGTGGGGACGAGGTaGCGGGATGAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCDVGTR*RDEGTW
Trigger: CCACGTCCCCTCATCCCGTCACCTCGTCCCCACATC...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGTTGGTGGTGCTTTCCTaGAAGGCAGCAGTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRLVVLS*KAAVSA
Trigger: CGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAA...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTTGGTGGTGCTTTCCTaGAAGGCAGCAGTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRLVVLS*KAAVSA
Trigger: CGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAA...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGCACTGTTCTTACCGCTaGTTTACCCTCTACTTCAAA +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVHCSYR*FTLYFK
Trigger: TTTGAAGTAGAGGGTAAATCAGCGGTAAGAACAGTG...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSGHGYE*AWSQKP
Trigger: TGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCERQEG*ILSRGP
Trigger: GGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTC...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGCCAATTCTCTTCTCCTaGACAGTATCTGTGCACGAG +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGPILFS*TVSVHE
Trigger: CTCGTGCACAGATACTGTGCAGGAGAAGAGAATTGG...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCTCAGAGGAACAGATTCCTCTaGCTTTCCGACTCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: QGAHLPMPIQRPLTGAPQRNRFL*LSDSVF
Trigger: GAAAACGGAGTCGGAAAGGCAGAGGAATCTGTTCCT...CTGAGGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp AGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCAGGACGACTCTGGGAGGACCTaGCCGTTGCAGATGACGTGG +
Preference number: 4 (lower is better)
Translates to: RFPRVTTRKTLVPQLPQDDSGRT*PLQMTW
Trigger: CCACGTCATCTGCAACGGGCAGGTCCTCCCAGAGTC...GTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTGACTCTGGGAGGACCTaGCCGTTGCAGATGACGTGG +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSDSGRT*PLQMTW
Trigger: CCACGTCATCTGCAACGGGCAGGTCCTCCCAGAGTC...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCTTGATCCCGGCCTTCTaGAGGGCCTCGATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTLIPAF*RASMVS
Trigger: AGACACCATCGAGGCCCTGCAGAAGGCCGGGATCAA...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGACGTCGTGCAGGCTCTaGTCCTCGATCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GPQLRSARWLLEGTARVLTSCRL*SSILLV
Trigger: CACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGT...CAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCAGAGCTCCCTGTAGTTaGCGGAACTCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFRAPCS*RNSRLL
Trigger: GAGAAGACGGGAGTTCCGGCAACTACAGGGAGCTCT...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTAGAGCTCCCTGTAGTTaGCGGAACTCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTARAPCS*RNSRLL
Trigger: GAGAAGACGGGAGTTCCGGCAACTACAGGGAGCTCT...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCAGGACTAGCAGAGCACCGCGCTaGAGCTCCGGCAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: DSLGSQRGRRLYPSSLRTSRAPR*SSGRFP
Trigger: TGGAAATCTGCCGGAGCTGCAGCGCGGTGCTCTGCT...AGTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGAAAGAAGAACACCAGTaGGTCAAACAGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKKEEHQ*VKQSQE
Trigger: CTCCTGGGACTGTTTGACGCACTGGTGTTCTTCTTT...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSICLPALAPAKSTFSRNTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: KRHVHSLHRLRTIHHTSIGLTAP*PGEWLM
Trigger: CATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCC...AATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACTCCAGCGTTGGTGGTaGTTTCCTGAAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQLQRWW*FPERQQ
Trigger: CTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACAATGTGTGCAGGAGCTTaGACGTTTGTGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: PCPVCHPRQPETGSGARTMCAGA*TFVVGT
Trigger: TGTACCCACCACAAACGTGCAAGCTCCTGCACACAT...TGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGTGTGTGTGCATGTGTaGAGTAGAAGCTCATACGTC +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALVCVHV*SRSSYV
Trigger: GACGTATGAGCTTCTACTGCACACATGCACACACAC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACAATGAATGTGCACGTGTaGAGGAGGCTGCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: PCPVCHPRQPETGSGARTMNVHV*RRLHVC
Trigger: ACAAACGTGCAGCCTCCTGCACACGTGCACATTCAT...TGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCATGTGTACGATGTGTaGACGTGTGTTTACACGTCT +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSHVYDV*TCVYTS
Trigger: AGACGTGTAAACACACGTGCACACATCGTACACATG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCCATGTGTACGATGTGTaGACGTGTGTTTACACGTCT +
Preference number: 4 (lower is better)
Translates to: EAAGVALSSHVALPSPRGHVYDV*TCVYTS
Trigger: AGACGTGTAAACACACGTGCACACATCGTACACATG...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGTGTGGTGCGTACATGTaGATGTGTACGTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HRAAGVSEAATSPPGPALCGAYM*MCTCGS
Trigger: GCTCCCACACGTACACATGCACATGTACGCACCACA...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCGTGTGTATTCACGCCTaGAGGAGCCTGCGCATGTGT +
Preference number: 4 (lower is better)
Translates to: PRDRVESSPFCLLKPVARVCIHA*RSLRMC
Trigger: ACACATGCGCAGGCTCCTGCAGGCGTGAATACACAC...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTCAGGGCACCAAGCCTTaGTCACAGAGCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVQGTKP*SQSSWC
Trigger: ACACCAGCTGCTCTGTGAGCAAGGCTTGGTGCCCTG...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCTTGTTCGCCCTGTCTaGTCAGACACAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTALVRPV*SDTGWV
Trigger: AACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCTCCAAAATGTGTACTTaGACGAGACGATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPSKMCT*TRRSCC
Trigger: ACAACAGGATCGTCTCGTCCAAGTACACATTTTGGA...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCAGGACCGTCCGGCGATTTCCTaGGGCCGTCTACGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: RFPRVTTRKTLVPQLPQDRPAIS*GRLRCH
Trigger: ATGACAGCGTAGACGGCCCCAGGAAATCGCCGGACG...GTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAGTAAAGCCAAGTCTCTaGACACCTTCGACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGVKPSL*TPSTSA
Trigger: GGCGCTGGTCGAAGGTGTCCAGAGACTTGGCTTTAC...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCCCTCGATCCTCTTGGTaGTCAGCTCCAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: RKRHVHSLHRLRTIHHTSPRSSW*SAPAAA
Trigger: CGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGG...GCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGGCTCCTCGATCCTCTTaGTGGTCAGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPQLRSARWLLEGTARVLAPRSS*WSAPAA
Trigger: AGCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGC...CAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGCTGTTCCTGGCAGCCTaGCGGCCTTCCTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLLFLAA*RPSLPM
Trigger: CATCGGCAAGGAAGGCCGCCAGGCTGCCAGGAACAG...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGTCTCTCTGTTGCTGTTaGCCACAGCTGCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: LGLLTHPEQRWTDPKTKESLCCC*PQLPAQ
Trigger: CTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGA...CTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGCACTGGCTCTTAGTCTaGACTCTCTCTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGHWLLV*TLSVAV
Trigger: AACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTG...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGAGTAAAGGACGCACCAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGLLSKGRTRAAVT*DGTAVV
Trigger: CACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCT...GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: TVSTGLGPSITRAFPHGTPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...GGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGCTCGACAGAAAGGCACTGGCTCTTAGTCTGGACTCTCTCTGTTGCTGTTGGCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLDRKALALSLDSLCCCWPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...CCAACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTGCCTTTCTGTCGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR CCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGACACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAG +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGHPEQR*TDPKTK
Trigger: CTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTG...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAG +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAHPEQR*TDPKTK
Trigger: CTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESLGNTL*VSLAGA
Trigger: GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAG...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTCCCCTCGGGACAGAGTaGAGTCTTCCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSPLGTE*SLPRSV
Trigger: GACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGG...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCGAGCTTGCACGTTTGTaGTGGGTACATGTACATATG +
Preference number: 4 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPELARL*WVHVHM
Trigger: CATATGTACATGTACCCACCACAAACGTGCAAGCTC...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAAGGTCACACATGCTTTaGTGCATGTACACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETRSHML*CMYTCV
Trigger: CACACACGTGTACATGCACCAAAGCATGTGTGACCT...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGGCACACGCGTGTCTGTaGTATGTGTACACGTGCATG +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLAHACL*YVYTCM
Trigger: CATGCACGTGTACACATACCACAGACACGCGTGTGC...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTCCTGCTGTGGCCGCCTaGTATAGGGCTGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCPAVAA*YRAEPR
Trigger: CCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGG...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGTGCGCACCCATTCTaGACTCTCTCTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PVCHPRQPETGSGARTPPCAHPF*TLSVAV
Trigger: AACAGCAACAGAGAGAGTCCAGAATGGGTGCGCACA...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000419631.1
CDS-3UTR TCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCGGTCACTGTAAACGTTaGTGCGACCCACGAACTTGT +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRGHCKR*CDPRTC
Trigger: ACAAGTTCGTGGGTCGCATCAACGTTTACAGTGACC...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCCCATGTTGTTTTCCGTaGGGGTGCCGGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGIPCCFP*GCRSCL
Trigger: CAGACAAGACCGGCACCCTCACGGAAAACAACATGG...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCAATCATGTCGATTCCTaGCGACTCTGGGAGGACCTG +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSNHVDS*RLWEDL
Trigger: CAGGTCCTCCCAGAGTCGTCAGGAATCGACATGATT...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGTCCTGCATATCTGCTaGAAGTCCGGACAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSVLHIC*KSGQVV
Trigger: GACAACCTGTCCGGACTTTCAGCAGATATGCAGGAC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCGGGTCGGGTCTCTCTTaGGCACGTCAATGCCAACAT +
Preference number: 4 (lower is better)
Translates to: ATDSLGSQRGRRLYPSSLGSGLS*ARQCQH
Trigger: ATGTTGGCATTGACGTGCTCAAGAGAGACCCGACCC...GAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGAGGTGGAAAATTGCATaGAGACCCTGCAACGTCATT +
Preference number: 4 (lower is better)
Translates to: QQPQCWVQAARVPCSRARRWKIA*RPCNVI
Trigger: AATGACGTTGCAGGGTCTTCATGCAATTTTCCACCT...CCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTGGCAGGGACTGGGTGTaGATCAGTGACCGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCGRDWV*ISDRVS
Trigger: AGAGACACGGTCACTGATTCACACCCAGTCCCTGCC...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCGTGCATACACGTGTGTaGGAGCAAGCCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESVHTRV*EQACRS
Trigger: GCTCCTACAGGCTTGCTCTCACACACGTGTATGCAC...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCTCAGTGCAAAACACATaGGCTGAGTGGTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATSVQNT*AEWFEE
Trigger: TTCTTCAAACCACTCAGCTCATGTGTTTTGCACTGA...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGGGATCTGGTCAACTTTaGCTTCTATCACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGGSGQL*LLSLGG
Trigger: TCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCC...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTTTGATCCCGGCCTTCTaGAGGGCCTCGATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSLIPAF*RASMVS
Trigger: AGACACCATCGAGGCCCTGCAGAAGGCCGGGATCAA...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGAGAGCTCCCTGTAGTTaGCGGAACTCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GPQLRSARWLLEGTARVLRAPCS*RNSRLL
Trigger: GAGAAGACGGGAGTTCCGGCAACTACAGGGAGCTCT...CAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGACACCTATGCCCACGTaGGCTTCCAGAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: AKPRHSARRGTLHPREAWTPMPT*ASRIML
Trigger: CAGCATGATTCTGGAAGCGCACGTGGGCATAGGTGT...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTAAAGAAGAACACCAGTaGGTCAAACAGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGKEEHQ*VKQSQE
Trigger: CTCCTGGGACTGTTTGACGCACTGGTGTTCTTCTTT...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTGCTGTTGGCCACAGCTaGCGGCACAGGACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCAVGHS*RHRTFL
Trigger: CAAGAAAGTCCTGTGCCGGCAGCTGTGGCCAACAGC...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGALDSLC*CWPQLP
Trigger: CGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAG...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTTCTGCTCAAGCCAGTTaGTCGCTACCCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRSAQAS*SLPSSL
Trigger: CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGA...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: HRLRTIHHTSIPTRDLGQLPRSV*SSQLLA
Trigger: AGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAG...CTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCAACATACAGAGAATCTaGCCCCGCTACAGGTGTTAC +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFNIQRI*PRYRCY
Trigger: GTAACACCTGTAGCGGGGGCAGATTCTCTGTATGTT...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGTCTGTAGGTCACACATaGTTTGGTGCATGTACACGT +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALSVGHT*FGACTR
Trigger: ACGTGTACATGCACCAAAGCATGTGTGACCTACAGA...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACGCTCATACGTCTCTCTaGTGTGCATACACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ETETQPAPTHRAGGLGRNAHTSL*CAYTCV
Trigger: CACACACGTGTATGCACAGCAGAGAGACGTATGAGC...GTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTAGCAAGGAGGCAGGATaGAGTGCAGGACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCSKEAG*SAGHQD
Trigger: GTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCT...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATTTCACCCCCGGGGCCTaGTCTGCAAAGCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: RVESSPFCLLKPVARYPHFTPGA*SAKPRH
Trigger: ATGTCTGGGCTTTGCAGAGCAGGCCCCGGGGGTGAA...ATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGCCGTGCTCCGACGCGTaGACGGATGAGGTGCGGCGT +
Preference number: 4 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGPCSDA*TDEVRR
Trigger: ACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGG...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCTCTGCGCCCGGAGGTaGCTCCCTGTGTCCCACGTA +
Preference number: 4 (lower is better)
Translates to: DNLGHRFPRVTTRKTLVPLCARR*LPVSHV
Trigger: TACGTGGGACACAGGGAGCCACCTCCGGGCGCAGAG...GGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp CAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCTCAGAATGACAAAGAAGAGTaGAAGTCCGCTTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: QGAHLPMPIQRPLTGAPQNDKEE*KSACHW
Trigger: CCAGTGACAAGCGGACTTCCACTCTTCTTTGTCATT...CTGAGGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGATCAAACCTTTCGATGTaGTTCTCCCTGTTTAATATC +
Preference number: 4 (lower is better)
Translates to: GLTGALGGRGPSQLARGGSNLSM*FSLFNI
Trigger: GATATTAAACAGGGAGAACCACATCGAAAGGTTTGA...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGCTCCTCGATCCTCTTaGTGGTCAGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAAPRSS*WSAPAA
Trigger: AGCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCGCTCCTCGATCCTCTTaGTGGTCAGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RKRHVHSLHRLRTIHHTSAPRSS*WSAPAA
Trigger: AGCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGC...GCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGCTCGACAGAAAGGCACTGGCTCTTAGTCTGGACTCTCTCTGTTGCTGTTGGGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLDRKALALSLDSLCCCWATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...CCAACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTGCCTTTCTGTCGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR CCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGATGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGCTGGGAACTCATTTGTaGTGTACACATGAATGTGCA +
Preference number: 4 (lower is better)
Translates to: WPCPPTWHCLLHEAAGDGLGTHL*CTHECA
Trigger: TGCACATTCATGTGTACACCACAAATGAGTTCCCAG...CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGACTGGGAGCTCGTTTGTaGTGTACACGTGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGLGARL*CTRVCM
Trigger: CATGCACACACGTGTACACCACAAACGAGCTCCCAG...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGAGTAAAGGACGCACCCTGGGAGCTCGTTTGTaGTGTACACGTGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGLLSKGRTLGARL*CTRVCM
Trigger: CATGCACACACGTGTACACCACAAACGAGCTCCCAG...GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGTTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHRLRTIHHTSIPTRDLGFSLRG*TSLKGK
Trigger: CTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAA...CCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGTTTGAAGAACAAGGCTaGAGGTTTCCCGCGACAGCA +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRFEEQG*RFPATA
Trigger: TGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAA...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCGATGCCGAATGCTTCTaGCCCTCAACTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: ATDSLGSQRGRRLYPSSLDAECF*PSTEVC
Trigger: GCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATC...GAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR CAA 72 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAGAGGATGTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLV*TPPRGQRMSAH
Trigger: ATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp GAACAACAGGGACTTCCTATCACAGCAGCCCTGGGGTaGCTAACCCACCCAGAGCAGCGCTGGACAGATCCT +
Preference number: 4 (lower is better)
Translates to: EQQGLPITAALG*LTHPEQRWTDP
Trigger: AGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTGTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTACGCGCTCCCTCCCGTTaGCGCTGGGGGACGAGTCAA +
Preference number: 4 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLRAPSR*RWGTSQ
Trigger: TTGACTCGTCCCCCAGCGTCAACGGGAGGGAGCGCG...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGATTTTTCTCTCGATCTTaGAGGGCCACTTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGFFSRS*RATLAA
Trigger: GGCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAA...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGACAGCATCTGGATaGACACGTAGTACATCCTCT +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTAWTASG*TRSTSS
Trigger: AGAGGATGTACTACGTGTTCATCCAGATGCTGTCCA...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 4 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACAAAGTGCTCAAAGTTaGCATTACTTGCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPQSAQS*HYLLQS
Trigger: ACTTTGAAGCAAGTAATGTCAACTTTGAGCACTTTG...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTCGACGCGTGCACGGATaGGGTGCGGCGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSRRVHG*GAAWVW
Trigger: CCACACCCACGCCGCACCTCATCCGTGCACGCGTCG...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGGAACAGATTCCTCTaGCTTTCCGACTCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHRNRFL*LSDSVF
Trigger: GAAAACGGAGTCGGAAAGGCAGAGGAATCTGTTCCT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGATCTGGTCAACTTTaGCTTCTATCACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQGSGQL*LLSLGG
Trigger: TCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCC...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTTGATCCCGGCCTTCTaGAGGGCCTCGATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: QLRSARWLLEGTARVLPSLIPAF*RASMVS
Trigger: AGACACCATCGAGGCCCTGCAGAAGGCCGGGATCAA...ACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp AAGCAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCTCCTGCGGAAGAGCTTaGAGGCGTAGCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: KQEYQQMPNASGPQLRSASCGRA*RRSTWP
Trigger: CGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGA...GGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp GGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGAAGCAGAGCACCGCGCTaGAGCTCCGGCAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: GVRFPQEHGRVRRLEFDGSRAPR*SSGRFP
Trigger: TGGAAATCTGCCGGAGCTGCAGCGCGGTGCTCTGCT...TCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR GCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCCTTAAACTTTGGGATTaGATAGTCGCTGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFLKLWD*IVAVPG
Trigger: GCCAGGAACAGCGACTATGCAATCCCAAAGTTTAAG...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCAGCATCTTCTTCAAATaGTTAAACTTTGGGATTGCA +
Preference number: 4 (lower is better)
Translates to: CWVQAARVPCSRARPVTPSIFFK*LNFGIA
Trigger: TGCAATCCCAAAGTTTAAGCATTTGAAGAAGATGCT...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTTCAATGCCAACATGCTaGTCCATGAGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTASMPTC*SMRLYR
Trigger: CCTGTACAGCCTCATGGAGCAGCATGTTGGCATTGA...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACAATAAAGATGGTTGACTaGTCGACAGAAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PCPVCHPRQPETGSGARTIKMVD*STERHW
Trigger: CCAGTGCCTTTCTGTCGAGCAGTCAACCATCTTTAT...TGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACGACTTGGGATGGAACTaGAGTGGTGATGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHDLGWN*SGDGNR
Trigger: GCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTC...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 4 (lower is better)
Translates to: RVESSPFCLLKPVARYPHAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...ATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCACGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GRGTCTVSTGLGPSITRARDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...TGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAAGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 4 (lower is better)
Translates to: QRWWCFPERQQFQRLKSEAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACC +
Preference number: 4 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGRAEVR*CLLGST
Trigger: GGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTCTCCAGCGTTGGTGGTaGTTTCCTGAAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCLQRWW*FPERQQ
Trigger: CTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: KRHVHSLHRLRTIHHTSIPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...AATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACAACATACAGAGAATCTaGCCCCGCTACAGGTGTTAC +
Preference number: 4 (lower is better)
Translates to: ETETQPAPTHRAGGLGRNNIQRI*PRYRCY
Trigger: GTAACACCTGTAGCGGGGGCAGATTCTCTGTATGTT...GTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTAGCAAATTATCGTaGCTTAAATGTGCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPCSKLS*LKCAVQ
Trigger: TTGAACAGCACATTTAAGGCACGATAATTTGCTACA...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAGTAAATACTAACTACTaGGAGGTGGAAAATTGCATG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPVNTNY*EVENCM
Trigger: CATGCAATTTTCCACCTCGCAGTAGTTAGTATTTAC...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGTGGTATGTGTACACGTaGATGTTCTGCATGTCTGTA +
Preference number: 4 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARWYVYT*MFCMSV
Trigger: TACAGACATGCAGAACATGCACGTGTACACATACCA...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGTGTGTGTGCATGTGTaGAGTAGAAGCTCATACGTC +
Preference number: 4 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRVCVHV*SRSSYV
Trigger: GACGTATGAGCTTCTACTGCACACATGCACACACAC...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCTGCTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCATGTGGTGCGTACATGTaGATGTGTACGTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VCSSQPSICLPALAPAKSCGAYM*MCTCGS
Trigger: GCTCCCACACGTACACATGCACATGTACGCACCACA...TGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCAGGGCACCAAGCCTTaGTCACAGAGCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RVESSPFCLLKPVARYPHQGTKP*SQSSWC
Trigger: ACACCAGCTGCTCTGTGAGCAAGGCTTGGTGCCCTG...ATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTCCGTGCTCCGACGCGTaGACGGATGAGGTGCGGCGT +
Preference number: 4 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAPCSDA*TDEVRR
Trigger: ACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGG...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGTTCAGTACTAGTCAGTaGAAAACACATGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGFSTSQ*KTHELS
Trigger: ACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAA...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCGCGGTCCCGAGGCTGTaGGCACCCATTCTGGACTCT +
Preference number: 4 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRAVPRL*APILDS
Trigger: AGAGTCCAGAATGGGTGCGCACAGCCTCGGGACCGC...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375630.6
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATCAAACCTTTCGATGTaGTTCTCCCTGTTTAATATC +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPSNLSM*FSLFNI
Trigger: GATATTAAACAGGGAGAACCACATCGAAAGGTTTGA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTGCCTCGATCCTCTTGGTaGTCAGCTCCAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: RISADAECFWPSTEVCQVPRSSW*SAPAAA
Trigger: CGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGG...CACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGGTCAGGCTCCCGCTGTaGCGCAGGACCGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGVRLPL*RRTVLL
Trigger: GAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGAC...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCCTCGGGACAGAGTaGAGTCTTCCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: KRHVHSLHRLRTIHHTSIPLGTE*SLPRSV
Trigger: GACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGG...AATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTTCCCAGCTGGCTCGTaGCGGAAGGCTGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVFPAGS*RKAGRA
Trigger: AGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAA...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACGCAGCAGGGCATTCTTaGCGACGTCCCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHAAGHS*RRPCCE
Trigger: TTCACAACAGGGACGTCGCCAAGAATGCCCTGCTGC...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR CAA 72 bp GCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTaGTACCCCAGCTCCCTCAGGACTGTCAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: ATDSLGSQRGRR*YPSSLRTVRKH
Trigger: GTGCTTTCTGACAGTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp AGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCAACCAAGCTGGCGGTGGTaGCGTGGCACGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: RTVRKHRKVQTGSTQMFQPSWRW*RGTSHL
Trigger: GAGATGGGACGTGCCACGTCACCACCGCCAGCTTGG...TTGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp GATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCACTCGATGGTGGCGTaGAGTCCGCCGATATCCTCC +
Preference number: 4 (lower is better)
Translates to: DNLGHRFPRVTTRKTLVPHSMVA*SPPISS
Trigger: GGAGGATATCGGCGGACTTCACGCCACCATCGAGTG...GGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGTTATCAGGGCTTTGCTaGTCAGAATGCAGAGATACA +
Preference number: 4 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLLSGLC*SECRDT
Trigger: TGTATCTCTGCATTCTGATCAGCAAAGCCCTGATAA...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGACTTCCAGAATCATGCTaGCATCATTTGCACCATCGC +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGLPESC*HHLHHR
Trigger: GCGATGGTGCAAATGATGTCAGCATGATTCTGGAAG...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTT +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKRLLEV*ESIKMV
Trigger: AACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCT...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTATGGAACTGCAGTGGTaGTGGGAACCGCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSMELQW*WEPPRM
Trigger: CATCCTCGGCGGTTCCCATCACCACTGCAGTTCCAT...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCTCAGCCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTT +
Preference number: 4 (lower is better)
Translates to: QGAHLPMPIQRPLTGAPQPSSLV*CLSPYF
Trigger: AAAATAAGGTGACAAACATCACACCAAAGATGAGGG...CTGAGGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCGTCAGAGGTACATGGTaGCTATCTCCACACAGGCAG +
Preference number: 4 (lower is better)
Translates to: TVSTGLGPSITRAFPHGTVRGTW*LSPHRQ
Trigger: CTGCCTGTGTGGAGATAGTCACCATGTACCTCTGAC...GGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TCCAGGCCGCGAGTGTCACCTGCTGAGAGTGGGAGCTGTACCAGGCGGCCGAGGCAAAGTGCTCAAAGTTaGCATTACTTGCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SRPRVSPAESGSCTRRPRQSAQS*HYLLQS
Trigger: ACTTTGAAGCAAGTAATGTCAACTTTGAGCACTTTG...CCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCTGATGTGGACATGGCTATaGGTGAGCGTGGAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: RLRTIHHTSIPTRDLGQLMWTWL*VSVEPK
Trigger: TTTTGGCTCCACGCTCACTCATAGCCATGTCCACAT...CAGCTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCTGTGACTTGGGATGGAATGTACATATGTGAGTaGTCCTGTGTGCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PSHEHSHTGPRAAVTWDGMYICE*SCVQAP
Trigger: GGGGGCTTGCACACAGGATCACTCACATATGTACAT...TCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGTACATGTACATATGTaGGTGATCCTGTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHVHVHM*VILCAS
Trigger: GCTTGCACACAGGATCACTCACATATGTACATGTAC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAAAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QRWWCFPERQQFQRLKSEKRGEF*VAVPRL
Trigger: CAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTT...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAGACTCTGGGAGGACCTaGCCGTTGCAGATGACGTGG +
Preference number: 4 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRDSGRT*PLQMTW
Trigger: CCACGTCATCTGCAACGGGCAGGTCCTCCCAGAGTC...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGGGATCTGGTCAACTTTaGCTTCTATCACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LHRLRTIHHTSIPTRDLGGSGQL*LLSLGG
Trigger: TCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCC...CCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AAGCAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCGTCAGCTCCAGCAGCTaGGTGTTCCTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KQEYQQMPNASGPQLRSAVSSSS*VFLRKS
Trigger: GCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGAC...GGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGATCTGCAAGGGCGCCATaGGGCAGCAGAGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGSARAP*GSRAPR
Trigger: GCGCGGTGCTCTGCTGCCGCATGGCGCCCTTGCAGA...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAACTTAAACTTTGGGATTaGATAGTCGCTGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKLKLWD*IVAVPG
Trigger: GCCAGGAACAGCGACTATGCAATCCCAAAGTTTAAG...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRSRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGCTCCAGCGTTGGTGGTaGTTTCCTGAAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLLQRWW*FPERQQ
Trigger: CTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTCACACATGCTTTGGTaGATGTACACGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRSHMLW*MYTCVC
Trigger: ACACACACACGTGTACATGCACCAAAGCATGTGTGA...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTACACGTGCATGTTCTaGATGTCTGTAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTAYTCMF*MSVGHT
Trigger: TGTGTGACCTACAGACATGCAGAACATGCACGTGTA...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGGTGCTTACCTGTACATaGATGTGTGTATCACACGTC +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGVLTCT*MCVSHV
Trigger: GACGTGTGATACACACATGCATGTACAGGTAAGCAC...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCGCTCATACGTCTCTCTaGTGTGCATACACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGIAHTSL*CAYTCV
Trigger: CACACACGTGTATGCACAGCAGAGAGACGTATGAGC...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTAGCAAGGAGGCAGGATaGAGTGCAGGACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCSKEAG*SAGHQD
Trigger: GTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCT...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACCTTGTTCGCCCTGTCTaGTCAGACACAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: TCTVSTGLGPSITRAFPHLVRPV*SDTGWV
Trigger: AACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAG...GTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR CCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTCTCTGCGCCCGGAGGTaGCTCCCTGTGTCCCACGTA +
Preference number: 4 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRALCARR*LPVSHV
Trigger: TACGTGGGACACAGGGAGCCACCTCCGGGCGCAGAG...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAGACGATCCTGTTGTCTaGGTATCTCTGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQDDPVV*VSLWDV
Trigger: TACATCCCACAGAGATACCCAGACAACAGGATCGTC...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTCATCTCCCCGGTTGCTaGAAAGGAAGATCAAGTCGC +
Preference number: 4 (lower is better)
Translates to: WPSTEVCQVAIGRNCQSAHLPGC*KGRSSR
Trigger: GCGACTTGATCTTCCTTTCCAGCAACCGGGGAGATG...AGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCACGTTACGCTCCACTCTaGCTCGGATCTGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: GRGTCTVSTGLGPSITRARYAPL*LGSGQL
Trigger: AAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACG...TGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGATGCAGGCGTAGCACGTaGCCGCGGCCGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRCRRST*PRPSPS
Trigger: AGATGGAGACGGCCGCGGCCACGTGCTACGCCTGCA...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCCAGGCCGCGAGTGTCACCTGCTGAGAGTGGGAGCTGTACCAGGCGGCCGAGGCAAATGCTTAAACTTTaGGATTGCATAGTCGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRPRVSPAESGSCTRRPRQMLKL*DCIVAV
Trigger: AACAGCGACTATGCAATCCCAAAGTTTAAGCATTTG...CCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCTCGACAGAAAGGCACTaGCTCTTAGTCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTSTERH*LLVWTL
Trigger: GAGAGTCCAGACTAAGAGCCAGTGCCTTTCTGTCGA...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGACCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAG +
Preference number: 4 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWHPEQR*TDPKTK
Trigger: CTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTG...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTCCTCCAGCGTTGGTaGTGCTTTCCTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RVESSPFCLLKPVARYPHLLQRW*CFPERQ
Trigger: CTGCCTTTCAGGAAAGCACCACCAACGCTGGAGGAG...ATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGCGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp GCTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGCTATaGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCT +
Preference number: 4 (lower is better)
Translates to: ASGPQLRSARWL*EGTARVLPSYS
Trigger: AGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTTTATCAGGGCTTTGCTaGTCAGAATGCAGAGATACA +
Preference number: 4 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRLSGLC*SECRDT
Trigger: TGTATCTCTGCATTCTGATCAGCAAAGCCCTGATAA...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATCCGACTCCGTTTTCTaGTTATACCACGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: GRGTCTVSTGLGPSITRASDSVF*LYHGSS
Trigger: GGATGAGCCGTGGTATAATCAGAAAACGGAGTCGGA...TGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR TCA 90 bp AGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCCATGTTGTTTTCCGTaGGGGTGCCGGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RSARWLLEGTARVLPSYSPCCFP*GCRSCL
Trigger: CAGACAAGACCGGCACCCTCACGGAAAACAACATGG...AGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp ACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCCGATGCAGCACTCCTTaGACTCCATGTTGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: TVSTGLGPSITRAFPHGTRCSTP*TPCCFP
Trigger: CGGAAAACAACATGGAGTTCAAGGAGTGCTGCATCG...GGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR TCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACGCCAATTGCTAACGTaGTTGGGTGCTCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQRQLLT*LGALLK
Trigger: TTTCAAAAGAGCACCCAATCACGTTAGCAATTGGCG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGAACTGGTATAAAAACTaGGGGAAGATGAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTANWYKN*GKMKQT
Trigger: CGTCTGCTTCATCTTCCCTCAGTTTTTATACCAGTT...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGTGGACAGCATCTGGATaGACACGTAGTACATCCTCT +
Preference number: 4 (lower is better)
Translates to: HRLRTIHHTSIPTRDLGQWTASG*TRSTSS
Trigger: AGAGGATGTACTACGTGTTCATCCAGATGCTGTCCA...CTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTT +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHAPSSLV*CLSPYF
Trigger: AAAATAAGGTGACAAACATCACACCAAAGATGAGGG...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGTGCAACGTCATTCACTaGGGATCTTCTCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLCNVIH*GSSHPF
Trigger: AAAAGGATGAGAAGATCCTCAGTGAATGACGTTGCA...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAAGCAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCTTCTGGCCCTCAACTaGGGTCTGCCAGGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: QARISADAECFWPSTEVCLLALN*GLPGGY
Trigger: ATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAG...GCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCCAATTCTCTTCTCCTaGACAGTATCTGTGCACGAG +
Preference number: 4 (lower is better)
Translates to: LHRLRTIHHTSIPTRDLGPILFS*TVSVHE
Trigger: CTCGTGCACAGATACTGTGCAGGAGAAGAGAATTGG...CCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR GCA 90 bp TTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTAGGTCGGGCTGGGGCTaGTCACACTCGATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LKDNLGHRFPRVTTRKTLRSGWG*SHSMVA
Trigger: CGCCACCATCGAGTGTGAGCAGCCCCAGCCCGACCT...AAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGCGAAAGGGCTCACTCTaGCACATGTATTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LGLLTHPEQRWTDPKTKERKGSL*HMYFST
Trigger: TGTGCTGAAATACATGTGGCAGAGTGAGCCCTTTCG...CTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGGAATATCGAAGAATCTaGTCCTTTGCAAAACAGATA +
Preference number: 4 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGEYRRI*SFAKQI
Trigger: TATCTGTTTTGCAAAGGAGCAGATTCTTCGATATTC...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACACAGGTGTTACATTTATaGCCATATTGGGTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETQVLHL*PYWVPK
Trigger: TTTAGGAACCCAATATGGGCATAAATGTAACACCTG...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCTATTGTGTAGGAGCATaGACACGCGTGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESYCVGA*TRVSVV
Trigger: TACCACAGACACGCGTGTGCATGCTCCTACACAATA...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTTACGTCTCTCTGCTGTaGATACACGTGTGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCYVSLL*IHVCES
Trigger: GCTCTCACACACGTGTATGCACAGCAGAGAGACGTA...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTGTGTGTATTCACGCCTaGAGGAGCCTGCGCATGTGT +
Preference number: 4 (lower is better)
Translates to: KRHVHSLHRLRTIHHTSIVCIHA*RSLRMC
Trigger: ACACATGCGCAGGCTCCTGCAGGCGTGAATACACAC...AATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTTCACCCCCGGGGCCTaGTCTGCAAAGCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVFTPGA*SAKPRH
Trigger: ATGTCTGGGCTTTGCAGAGCAGGCCCCGGGGGTGAA...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGAGTAAAGGACGCACCAATGCGTTTTATGGCTaGATTCTCCATCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGLLSKGRTNAFYG*ILHPSW
Trigger: CCAGCTTGGATGGAGAATCCAGCCATAAAACGCATT...GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTACTCTGGCTCGGATCTaGTCAACTTTGCCTTCTATC +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRTLARI*STLPSI
Trigger: GATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGT...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTCGTTACGCTCCACTCTaGCTCGGATCTGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: QLRSARWLLEGTARVLPSRYAPL*LGSGQL
Trigger: AAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACG...ACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp CTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTTGAATGCAGGCGTAGCACGTaGCCGCGGCCGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LAPHRCSKCSINHPARLECRRST*PRPSPS
Trigger: AGATGGAGACGGCCGCGGCCACGTGCTACGCCTGCA...TTCAAGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp AAAGTGCAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCGTCAGGCTCCCGCTGTaGCGCAGGACCGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KVQTGSTQMFQMQHKPSSVRLPL*RRTVLL
Trigger: GAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGAC...GCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTGCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCTCTGTTGCTGTTaGCCACAGCTGCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: QRWWCFPERQQFQRLKSESLCCC*PQLPAQ
Trigger: CTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGA...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGCTCGACAGAAAGGCACTGGCTCTTAGTCTGGACTCTCTCTGTTGCTGTTGGGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLDRKALALSLDSLCCCWGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...CCAACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTGCCTTTCTGTCGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR CCA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 4 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGCATTCATCAGAGATTaGAACATTCAGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALAFIRD*NIQSKL
Trigger: GAGTTTTGACTGAATGTTCCAATCTCTGATGAATGC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTGAGCTTGCACGTTTGTaGTGGGTACATGTACATATG +
Preference number: 4 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCELARL*WVHVHM
Trigger: CATATGTACATGTACCCACCACAAACGTGCAAGCTC...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGGTCACACATGCTTTaGTGCATGTACACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LGLLTHPEQRWTDPKTKERSHML*CMYTCV
Trigger: CACACACGTGTACATGCACCAAAGCATGTGTGACCT...CTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTGAGCCTGTGCGTGTTTaGGGTGTGTCCATGTGCATC +
Preference number: 4 (lower is better)
Translates to: KRHVHSLHRLRTIHHTSIEPVRV*GVSMCI
Trigger: GATGCACATGGACACACCCCAAACACGCACAGGCTC...AATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGTGCATGTGTACGTGTaGGAGCTCACGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSVHVYV*ELTCGR
Trigger: TCTCCCACACGTGAGCTCCCACACGTACACATGCAC...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTTTTGAAGAACAAGGCTaGAGGTTTCCCGCGACAGCA +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCFEEQG*RFPATA
Trigger: TGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAA...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAAGTCCCAGCTCTTCATTaGGGTCCGACGTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: QRWWCFPERQQFQRLKSEVPALH*GPTCSP
Trigger: TGGTGAACACGTCGGACCTCAATGAAGAGCTGGGAC...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACCTGCCCGTTGCAGATaGCGTGGGGCACGTAGACAT +
Preference number: 4 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRPARCR*RGARRH
Trigger: ATGTCTACGTGCCCCACGTCATCTGCAACGGGCAGG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTCTTCCAGAATCATGCTaGCATCATTTGCACCATCGC +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCLPESC*HHLHHR
Trigger: GCGATGGTGCAAATGATGTCAGCATGATTCTGGAAG...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACGGCCTTCCTTGCCGATaGCACCTATGCCCACGTGCG +
Preference number: 4 (lower is better)
Translates to: STGKCKLAPHRCSKCSINGLPCR*HLCPRA
Trigger: CGCACGTGGGCATAGGTGTCATCGGCAAGGAAGGCC...GTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGAGTAAAGGACGCACCAACTGGTATAAAAACTaGGGGAAGATGAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGLLSKGRTNWYKN*GKMKQT
Trigger: CGTCTGCTTCATCTTCCCTCAGTTTTTATACCAGTT...GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTGCTCGACAGAAAGGCACTGGCTCTTAGTCTGGACTCTCTCTGTTGCTGTTGGACATCCTCTGGTAGTTaGGGAACGGCCAGATCACTC +
Preference number: 4 (lower is better)
Translates to: LLDRKALALSLDSLCCCWTSSGS*GTARSL
Trigger: GAGTGATCTGGCCGTTCCTCAACTACCAGAGGATGT...CCAACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTGCCTTTCTGTCGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR TCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACTGGACAGCATCTGGATaGACACGTAGTACATCCTCT +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHWTASG*TRSTSS
Trigger: AGAGGATGTACTACGTGTTCATCCAGATGCTGTCCA...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCACTGTTCTTACCGCTaGTTTACCCTCTACTTCAAA +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAHCSYR*FTLYFK
Trigger: TTTGAAGTAGAGGGTAAATCAGCGGTAAGAACAGTG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTGTTCATGGCATTGTCTaGTTTATGTCGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRVHGIV*FMSKPV
Trigger: GACTGGCTTCGACATAAAGCAGACAATGCCATGAAC...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTAGCAGAGCACCGCGCTaGAGCTCCGGCAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRASRAPR*SSGRFP
Trigger: TGGAAATCTGCCGGAGCTGCAGCGCGGTGCTCTGCT...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTGACACCTATGCCCACGTaGGCTTCCAGAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: RISADAECFWPSTEVCQVTPMPT*ASRIML
Trigger: CAGCATGATTCTGGAAGCGCACGTGGGCATAGGTGT...CACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp GTCTGCTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCACTTAAACTTTGGGATTaGATAGTCGCTGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VCSSQPSICLPALAPAKSLKLWD*IVAVPG
Trigger: GCCAGGAACAGCGACTATGCAATCCCAAAGTTTAAG...TGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCAAATATCTGCCCGTTaGTTGTCACAGTTGTATTTT +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHAQISAR*LSQLYF
Trigger: AAAATACAACTGTGACAAGCAACGGGCAGATATTTG...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTGCTGTTGGCCACAGCTaGCGGCACAGGACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVAVGHS*RHRTFL
Trigger: CAAGAAAGTCCTGTGCCGGCAGCTGTGGCCAACAGC...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKRRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCATGTTCAACTAATCACTaGCACCAGAAATACCAAGAA +
Preference number: 4 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPCSTNH*HQKYQE
Trigger: TTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACA...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACATGTGTGCAGGAGCTTaGACGTTTGTGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: TCTVSTGLGPSITRAFPHMCAGA*TFVVGT
Trigger: TGTACCCACCACAAACGTGCAAGCTCCTGCACACAT...GTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGTACACGTGCATGTTCTaGATGTCTGTAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: LHRLRTIHHTSIPTRDLGYTCMF*MSVGHT
Trigger: TGTGTGACCTACAGACATGCAGAACATGCACGTGTA...CCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTCGTCCGGCGATTTCCTaGGGCCGTCTACGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRARPAIS*GRLRCH
Trigger: ATGACAGCGTAGACGGCCCCAGGAAATCGCCGGACG...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCACTCTGGCTCGGATCTaGTCAACTTTGCCTTCTATC +
Preference number: 4 (lower is better)
Translates to: RKRHVHSLHRLRTIHHTSTLARI*STLPSI
Trigger: GATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGT...GCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCTGCTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCACGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: VCSSQPSICLPALAPAKSRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...TGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACCCCTCGGGACAGAGTaGAGTCTTCCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRPLGTE*SLPRSV
Trigger: GACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp GAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTTGGTGTGATGTTTGTC +
Preference number: 4 (lower is better)
Translates to: EWSLPRSVCSSQ*LATLIFGVMFV
Trigger: GACAAACATCACACCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp TCAACTCAGGGGAGTCCCCACAGCCTGTCTAAACATTaGTTTAAACGCTCAGCAAGCCGAGCGGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: STQGSPHSLSKH*FKRSASRADGH
Trigger: GTGACCATCCGCTCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
CDS-3UTR TCA 90 bp CTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCTCTGCATCTCGACCGTaGCGTACATGGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: LRTVRKHRKVQTGSTQMFSASRP*RTWTQG
Trigger: TCCCTGTGTCCATGTACGTCACGGTCGAGATGCAGA...GAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTCCTGCCCGTTGCAGATaGCGTGGGGCACGTAGACAT +
Preference number: 4 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTPARCR*RGARRH
Trigger: ATGTCTACGTGCCCCACGTCATCTGCAACGGGCAGG...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp AAGCAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCGTCCTGCATATCTGCTaGAAGTCCGGACAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: KQEYQQMPNASGPQLRSAVLHIC*KSGQVV
Trigger: GACAACCTGTCCGGACTTTCAGCAGATATGCAGGAC...GGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTGGCACAGGACTTTCTTaGGGACGTCGGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TYRESAPATGVTFMPILGGTGLS*GRREGG
Trigger: GCCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCC...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: TYRESAPATGVTFMPILGMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGGHGYE*AWSQKP
Trigger: TGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCC...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTTCAGTGCAAAACACATaGGCTGAGTGGTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRSVQNT*AEWFEE
Trigger: TTCTTCAAACCACTCAGCTCATGTGTTTTGCACTGA...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSKRGEF*VAVPRL
Trigger: CAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTT...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR GCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTCCACGTAGATGGTCCTaGTGTCCACCCAATTCTCTT +
Preference number: 4 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCPRRWS*CPPNSL
Trigger: AAGAGAATTGGGTGGACAGCAGGACCATCTACGTGG...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTGAGCCGAGGAACTTCTaGATCTCGACCGTGACGTAC +
Preference number: 4 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVEPRNF*ISTVTY
Trigger: GTACGTCACGGTCGAGATGCAGAAGTTCCTCGGCTC...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTATTGATCCCGGCCTTCTaGAGGGCCTCGATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLLIPAF*RASMVS
Trigger: AGACACCATCGAGGCCCTGCAGAAGGCCGGGATCAA...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AAAGTGCAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCGCAGCTGCGTGTTCCTaGGGAAGAGCTTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: KVQTGSTQMFQMQHKPSSAAACS*GRACRR
Trigger: ACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGC...GCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTGCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp AAAAACTTCAGGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAAGAGCTCCCTGTAGTTaGCGGAACTCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KNFRCAFPTRTWPRETFGRAPCS*RNSRLL
Trigger: GAGAAGACGGGAGTTCCGGCAACTACAGGGAGCTCT...TCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACCTGAAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR GCA 90 bp GAATCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCATCTGCAAGGGCGCCATaGGGCAGCAGAGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: ESPFELCCFQFKQAPDQASARAP*GSRAPR
Trigger: GCGCGGTGCTCTGCTGCCGCATGGCGCCCTTGCAGA...TGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCACACCTATGCCCACGTaGGCTTCCAGAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRTPMPT*ASRIML
Trigger: CAGCATGATTCTGGAAGCGCACGTGGGCATAGGTGT...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTCTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRALDSLC*CWPQLP
Trigger: CGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAG...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCAATCAGAAACTCAGGCTaGTGGAAGTCTGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GRGTCTVSTGLGPSITRAIRNSG*WKSEKA
Trigger: TGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGAT...TGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCATGTAGCAAATTATCGTaGCTTAAATGTGCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPCSKLS*LKCAVQ
Trigger: TTGAACAGCACATTTAAGGCACGATAATTTGCTACA...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACTCACACATGCTTTGGTaGATGTACACGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PSICLPALAPAKSTFSRNSHMLW*MYTCVC
Trigger: ACACACACACGTGTACATGCACCAAAGCATGTGTGA...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACTCTGTAGGTCACACATaGTTTGGTGCATGTACACGT +
Preference number: 4 (lower is better)
Translates to: PSICLPALAPAKSTFSRNSVGHT*FGACTR
Trigger: ACGTGTACATGCACCAAAGCATGTGTGACCTACAGA...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTTGGTATGTGTACACGTaGATGTTCTGCATGTCTGTA +
Preference number: 4 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVWYVYT*MFCMSV
Trigger: TACAGACATGCAGAACATGCACGTGTACACATACCA...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGCGGAAGGCTGGCCGTaGTCCGACGCGTGCACGGAT +
Preference number: 4 (lower is better)
Translates to: AKVESHFHDTSNISHQGCAEGWP*SDACTD
Trigger: ATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATACTTTTATTCTTTATTaGAAGCAGATTCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLVWLNNHSAGSRRPGCHTFILY*KQIQVS
Trigger: GGAGACCTGAATCTGCTTGCAATAAAGAATAAAAGT...ATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGTCCAAAATGTGTACTTaGACGAGACGATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LGLLTHPEQRWTDPKTKESKMCT*TRRSCC
Trigger: ACAACAGGATCGTCTCGTCCAAGTACACATTTTGGA...CTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCGTAAAGCCAAGTCTCTaGACACCTTCGACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LRTVRKHRKVQTGSTQMFVKPSL*TPSTSA
Trigger: GGCGCTGGTCGAAGGTGTCCAGAGACTTGGCTTTAC...GAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGCAAATGCTTAAACTTTaGGATTGCATAGTCGCTGTT +
Preference number: 4 (lower is better)
Translates to: CGIHMWATMGPWTALLSQQMLKL*DCIVAV
Trigger: AACAGCGACTATGCAATCCCAAAGTTTAAGCATTTG...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 4 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: AKVESHFHDTSNISHQGCFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTGTGCATGTGTACGTGTaGGAGCTCACGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVVHVYV*ELTCGR
Trigger: TCTCCCACACGTGAGCTCCCACACGTACACATGCAC...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCTGCCAGGTGGCTATTaGAAGGAACTGCCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: PQDCQKAQESANWLHTDVLPGGY*KELPEC
Trigger: GCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAG...AACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp TCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCCTGAGGTCTGCCAGGTaGCTATTGGAAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: SGLSESTGKCKLAPHRCSLRSAR*LLEGTA
Trigger: GGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAG...GGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp GATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCTCCGACTCCGTTTTCTaGTTATACCACGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: DNLGHRFPRVTTRKTLVPSDSVF*LYHGSS
Trigger: GGATGAGCCGTGGTATAATCAGAAAACGGAGTCGGA...GGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCATTCTCCTTCTGACTaGGTCAAAACTCAAAATTTC +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAHSPSD*VKTQNF
Trigger: GAAATTTTGAGTTTTGACTCAGTCAGAAGGAGAATG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp ACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACCGCCAATTGCTAACGTaGTTGGGTGCTCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TCTVSTGLGPSITRAFPHRQLLT*LGALLK
Trigger: TTTCAAAAGAGCACCCAATCACGTTAGCAATTGGCG...GTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTCTGCTCTTCCAGAATCATGCTaGCATCATTTGCACCATCGC +
Preference number: 4 (lower is better)
Translates to: PGGYWKELPECCLVTLSALPESC*HHLHHR
Trigger: GCGATGGTGCAAATGATGTCAGCATGATTCTGGAAG...AGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAAAACTGAGGGAAGATaGAGCAGACGTTCTTATAGA +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRKTEGR*SRRSYR
Trigger: TCTATAAGAACGTCTGCTTCATCTTCCCTCAGTTTT...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCACTGTTCTTACCGCTaGTTTACCCTCTACTTCAAA +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAHCSYR*FTLYFK
Trigger: TTTGAAGTAGAGGGTAAATCAGCGGTAAGAACAGTG...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCTGTGACTTGGGATGGACCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTT +
Preference number: 4 (lower is better)
Translates to: PSHEHSHTGPRAAVTWDGPSSLV*CLSPYF
Trigger: AAAATAAGGTGACAAACATCACACCAAAGATGAGGG...TCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAAAGTCAGAACTTTTCTAGGCTTCCTGATACCAGAAAGACATCCATGTTTACATCTGCAAGGGCGCCATaGGGCAGCAGAGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: QSQNFSRLPDTRKTSMFTSARAP*GSRAPR
Trigger: GCGCGGTGCTCTGCTGCCGCATGGCGCCCTTGCAGA...TGTAAACATGGATGTCTTTCTGGTATCAGGAAGCCTAGAAAAGTTCTGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR GCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGAGCATCTTCTTCAAATaGTTAAACTTTGGGATTGCA +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLSIFFK*LNFGIA
Trigger: TGCAATCCCAAAGTTTAAGCATTTGAAGAAGATGCT...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACAAATATCTGCCCGTTaGTTGTCACAGTTGTATTTT +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQQISAR*LSQLYF
Trigger: AAAATACAACTGTGACAAGCAACGGGCAGATATTTG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCAGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: AKVESHFHDTSNISHQGCGLTAP*PGEWLM
Trigger: CATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTCGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRARDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRRDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCAGGTGTTACATTTATaGCCATATTGGGTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSQVLHL*PYWVPK
Trigger: TTTAGGAACCCAATATGGGCATAAATGTAACACCTG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAATGTTCAACTAATCACTaGCACCAGAAATACCAAGAA +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQCSTNH*HQKYQE
Trigger: TTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACA...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAGTAAATACTAACTACTaGGAGGTGGAAAATTGCATG +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGVNTNY*EVENCM
Trigger: CATGCAATTTTCCACCTCGCAGTAGTTAGTATTTAC...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAATGTGTGCAGGAGCTTaGACGTTTGTGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRMCAGA*TFVVGT
Trigger: TGTACCCACCACAAACGTGCAAGCTCCTGCACACAT...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTTGGTATGTGTACACGTaGATGTTCTGCATGTCTGTA +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSWYVYT*MFCMSV
Trigger: TACAGACATGCAGAACATGCACGTGTACACATACCA...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAAATGAATGTGCACGTGTaGAGGAGGCTGCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: QRWWCFPERQQFQRLKSEMNVHV*RRLHVC
Trigger: ACAAACGTGCAGCCTCCTGCACACGTGCACATTCAT...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTCACAGATGTTCCAAATaGAGCATAAACCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: WPSTEVCQVAIGRNCQSAHRCSK*SINHPA
Trigger: TGCTGGATGGTTTATGCTGCATTTGGAACATCTGTG...AGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGCAGGACACTGGTTCATaGCATTGTCTGCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWQDTGS*HCLLYV
Trigger: GACATAAAGCAGACAATGCCATGAACCAGTGTCCTG...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGCATCTCCCCGGTTGCTaGAAAGGAAGATCAAGTCGC +
Preference number: 4 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGHLPGC*KGRSSR
Trigger: GCGACTTGATCTTCCTTTCCAGCAACCGGGGAGATG...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTCTGTGTGGAAGCCTTTaGTGTCCTGGACCGCGTAAT +
Preference number: 4 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVLCGSL*CPGPRN
Trigger: ATTACGCGGTCCAGGACACCAAAGGCTTCCACACAG...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGTTCACCTGGACGGTGTaGCAGAGACAGAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQFTWTV*QRQRAR
Trigger: CCGGGCCCTCTGTCTCTGCCACACCGTCCAGGTGAA...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTCACTGGCTCTTAGTCTaGACTCTCTCTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSHWLLV*TLSVAV
Trigger: AACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTG...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGAATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 4 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGT +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQKESPA*GHGDEG
Trigger: ACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTT...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGT +
Preference number: 4 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRKESPA*GHGDEG
Trigger: ACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTT...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: TYRESAPATGVTFMPILGLGNTL*VSLAGA
Trigger: GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAG...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTGCATTCATCAGAGATTaGAACATTCAGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCAFIRD*NIQSKL
Trigger: GAGTTTTGACTGAATGTTCCAATCTCTGATGAATGC...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGGGTCACTGTAAACGTTaGTGCGACCCACGAACTTGT +
Preference number: 4 (lower is better)
Translates to: LLIKQEYQQMPNASGPQLGHCKR*CDPRTC
Trigger: ACAAGTTCGTGGGTCGCATCAACGTTTACAGTGACC...CAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTTGAAGTCCCAGCTCTTCATTaGGGTCCGACGTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LAPHRCSKCSINHPARLEVPALH*GPTCSP
Trigger: TGGTGAACACGTCGGACCTCAATGAAGAGCTGGGAC...TTCAAGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CCTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCGATGCAGCACTCCTTaGACTCCATGTTGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: PQDCQKAQESANWLHTDVRCSTP*TPCCFP
Trigger: CGGAAAACAACATGGAGTTCAAGGAGTGCTGCATCG...AACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTAAAACTGAGGGAAGATaGAGCAGACGTTCTTATAGA +
Preference number: 4 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCKTEGR*SRRSYR
Trigger: TCTATAAGAACGTCTGCTTCATCTTCCCTCAGTTTT...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACCACTGTTCTTACCGCTaGTTTACCCTCTACTTCAAA +
Preference number: 4 (lower is better)
Translates to: TCTVSTGLGPSITRAFPHHCSYR*FTLYFK
Trigger: TTTGAAGTAGAGGGTAAATCAGCGGTAAGAACAGTG...GTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGTGCAACGTCATTCACTaGGGATCTTCTCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLCNVIH*GSSHPF
Trigger: AAAAGGATGAGAAGATCCTCAGTGAATGACGTTGCA...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTTGAAGAGCCGAGGAACTTCTaGATCTCGACCGTGACGTAC +
Preference number: 4 (lower is better)
Translates to: LAPHRCSKCSINHPARLEEPRNF*ISTVTY
Trigger: GTACGTCACGGTCGAGATGCAGAAGTTCCTCGGCTC...TTCAAGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCGGATCTGGTCAACTTTaGCTTCTATCACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LRTVRKHRKVQTGSTQMFGSGQL*LLSLGG
Trigger: TCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCC...GAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp TCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGATCGGAGCCCCTCCACTaGGTTACGCTCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: SPFELCCFQFKQAPDQARSEPLH*VTLHSG
Trigger: GCCAGAGTGGAGCGTAACGCAGTGGAGGGGCTCCGA...TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGTCCTGCGGAAGAGCTTaGAGGCGTAGCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLSCGRA*RRSTWP
Trigger: CGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGA...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAGCTAACGTGATTGGGTaGTCTTTTGAAAATTTGATT +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGANVIG*SFENLI
Trigger: AATCAAATTTTCAAAAGAGCACCCAATCACGTTAGC...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCAGCATCTTCTTCAAATaGTTAAACTTTGGGATTGCA +
Preference number: 4 (lower is better)
Translates to: PRDRVESSPFCLLKPVARSIFFK*LNFGIA
Trigger: TGCAATCCCAAAGTTTAAGCATTTGAAGAAGATGCT...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTACGTCAATGCCAACATaGTGCTCCATGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: PQDCQKAQESANWLHTDVTSMPT*CSMRLY
Trigger: GTACAGCCTCATGGAGCAGCATGTTGGCATTGACGT...AACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGTGTGTAGGAGCCTGTaGGTGTTTGGGGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGVCRSL*VFGVCP
Trigger: TGGACACACCCCAAACACGCACAGGCTCCTACACAC...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTCAGATTCAGGTCTCCTaGTTAGATAATCTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRQIQVS*LDNLEK
Trigger: TTTCTCTAGATTATCTAAGCAGGAGACCTGAATCTG...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCAAGGAACTGCCAGAGTaGTGCCTAGTTACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: DNLGHRFPRVTTRKTLVPKELPE*CLVTLS
Trigger: AGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTT...GGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp AGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTGAATGACAAAGAAGAGTaGAAGTCCGCTTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: RISADAECFWPSTEVCQVNDKEE*KSACHW
Trigger: CCAGTGACAAGCGGACTTCCACTCTTCTTTGTCATT...CACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTGCTCACACTCGATGGTaGCGTGAAGTCCGCCGATAT +
Preference number: 4 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTAHTRW*REVRRY
Trigger: ATATCGGCGGACTTCACGCCACCATCGAGTGTGAGC...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGATGCAGGCGTAGCACGTaGCCGCGGCCGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKRCRRST*PRPSPS
Trigger: AGATGGAGACGGCCGCGGCCACGTGCTACGCCTGCA...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTAGTCAGGCTCCCGCTGTaGCGCAGGACCGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLVRLPL*RRTVLL
Trigger: GAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGAC...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGACTGTTCCTGGCAGCCTaGCGGCCTTCCTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: SPFELCCFQFKQAPDQARLFLAA*RPSLPM
Trigger: CATCGGCAAGGAAGGCCGCCAGGCTGCCAGGAACAG...TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GTCTGCTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCACAAATGCTTAAACTTTaGGATTGCATAGTCGCTGTT +
Preference number: 4 (lower is better)
Translates to: VCSSQPSICLPALAPAKSQMLKL*DCIVAV
Trigger: AACAGCGACTATGCAATCCCAAAGTTTAAGCATTTG...TGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTCTCCTCCAGCGTTGGTaGTGCTTTCCTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TYRESAPATGVTFMPILGLLQRW*CFPERQ
Trigger: CTGCCTTTCAGGAAAGCACCACCAACGCTGGAGGAG...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGCCCCTCGGGACAGAGTaGAGTCTTCCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRPLGTE*SLPRSV
Trigger: GACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGG...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAGCTTGCACGTTTGTaGTGGGTACATGTACATATG +
Preference number: 4 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSELARL*WVHVHM
Trigger: CATATGTACATGTACCCACCACAAACGTGCAAGCTC...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGAAAGTGCAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGGCTGTTTGGAGGATaGTACCTGTACAGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: RKVQTGSTQMFQMQHKPSRLFGG*YLYRVG
Trigger: CCCGACCCTGTACAGGTACCATCCTCCAAACAGCCT...GGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GCCACTGCATCTGGAAGGGTCATACATCTGACTGGTCATCACCCACTAATCACATTTCCCACAAGAACATaGCCGCGTGAGACGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ATASGRVIHLTGHHPLITFPTRT*PRETFG
Trigger: TCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAA...TGTGATTAGTGGGTGATGACCAGTCAGATGTATGACCCTTCCAGATGCAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR CAA 72 bp GATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTaGTGGCACATGTGTGTATATGTGTGTGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: DAVQDTRTVCTC*WHMCVYVCACV
Trigger: CACACATGCACACACATATACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp AGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTaGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCAC +
Preference number: 4 (lower is better)
Translates to: STSQCKTHELSG*KNKAGGFPRQH
Trigger: GTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
CDS-3UTR TCA 90 bp GATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCGCCAATTGCTAACGTaGTTGGGTGCTCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: DNLGHRFPRVTTRKTLVPRQLLT*LGALLK
Trigger: TTTCAAAAGAGCACCCAATCACGTTAGCAATTGGCG...GGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGAACTGGTATAAAAACTaGGGGAAGATGAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: QEYQQMPNASGPQLRSARNWYKN*GKMKQT
Trigger: CGTCTGCTTCATCTTCCCTCAGTTTTTATACCAGTT...CCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCAGGTGGAAAATTGCATaGAGACCCTGCAACGTCATT +
Preference number: 4 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRRWKIA*RPCNVI
Trigger: AATGACGTTGCAGGGTCTTCATGCAATTTTCCACCT...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AAAAACTTCAGGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAATGGACAAGACAAGTTaGATCCTCGTGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: KNFRCAFPTRTWPRETFGMDKTS*ILVAFP
Trigger: GGGAAATGCCACGAGGATTCAACTTGTCTTGTCCAT...TCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACCTGAAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR GCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAGTTCATGGCATTGTCTaGTTTATGTCGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRVHGIV*FMSKPV
Trigger: GACTGGCTTCGACATAAAGCAGACAATGCCATGAAC...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTGCCACTTTGGCAGCCTaGAGCAGCTTACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTATLAA*SSLQMP
Trigger: AGGCATTTGTAAGCTGCTGCAGGCTGCCAAAGTGGC...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGGCAGCTGCGTGTTCCTaGGGAAGAGCTTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLAAACS*GRACRR
Trigger: ACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGC...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCATAAAGATGGTTGACTaGTCGACAGAAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRIKMVD*STERHW
Trigger: CCAGTGCCTTTCTGTCGAGCAGTCAACCATCTTTAT...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTATGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCTCTGTAGGTCACACATaGTTTGGTGCATGTACACGT +
Preference number: 4 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRSVGHT*FGACTR
Trigger: ACGTGTACATGCACCAAAGCATGTGTGACCTACAGA...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTGACACCAGGACAGTGTaGACTTGTTTGTGGCACATG +
Preference number: 4 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRADTRTV*TCLWHM
Trigger: CATGTGCCACAAACAAGTGCACACTGTCCTGGTGTC...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGCAGGGCACCAAGCCTTaGTCACAGAGCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQQGTKP*SQSSWC
Trigger: ACACCAGCTGCTCTGTGAGCAAGGCTTGGTGCCCTG...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACACACATGGTTTTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGCCCTCAACTGAGGTCTaGCAGGTGGCTATTGGAAGG +
Preference number: 4 (lower is better)
Translates to: THMVLKDNLGHRFPRVTTPSTEV*QVAIGR
Trigger: CCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGG...CGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAAAACCATGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTTCAGCAGATGCCGAATaGTTCTGGCCCTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTSADAE*FWPSTE
Trigger: CTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGA...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGATGTGTCCCACGTAGATaGTCCTGCTGTCCACCCAAT +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGCVPRR*SCCPPN
Trigger: ATTGGGTGGACAGCAGGACCATCTACGTGGGACACA...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCGACGATCCTGTTGTCTaGGTATCTCTGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: SGLSESTGKCKLAPHRCSDDPVV*VSLWDV
Trigger: TACATCCCACAGAGATACCCAGACAACAGGATCGTC...GGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGACATCTCCCCGGTTGCTaGAAAGGAAGATCAAGTCGC +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGHLPGC*KGRSSR
Trigger: GCGACTTGATCTTCCTTTCCAGCAACCGGGGAGATG...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTCTGTGTGGAAGCCTTTaGTGTCCTGGACCGCGTAAT +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSLCGSL*CPGPRN
Trigger: ATTACGCGGTCCAGGACACCAAAGGCTTCCACACAG...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AAATGCAGCATAAACCATCCAGCAAGACTTGAAGAATCTCCATTTGAGCTATGTTTCACCTGGACGGTGTaGCAGAGACAGAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KCSINHPARLEESPFELCFTWTV*QRQRAR
Trigger: CCGGGCCCTCTGTCTCTGCCACACCGTCCAGGTGAA...ACATAGCTCAAATGGAGATTCTTCAAGTCTTGCTGGATGGTTTATGCTGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp TCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCACTCTGGCTCGGATCTaGTCAACTTTGCCTTCTATC +
Preference number: 4 (lower is better)
Translates to: SGLSESTGKCKLAPHRCSTLARI*STLPSI
Trigger: GATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGT...GGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp AAACGTCCAGTTTCCAAATATCTGCCCGTTGCTTGTCACAGTTGTATTTTCAAACTGTTCCTGGCAGCCTaGCGGCCTTCCTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: KRPVSKYLPVACHSCIFKLFLAA*RPSLPM
Trigger: CATCGGCAAGGAAGGCCGCCAGGCTGCCAGGAACAG...TTTGAAAATACAACTGTGACAAGCAACGGGCAGATATTTGGAAACTGGACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR CCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACGCATTCATCAGAGATTaGAACATTCAGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: PSICLPALAPAKSTFSRNAFIRD*NIQSKL
Trigger: GAGTTTTGACTGAATGTTCCAATCTCTGATGAATGC...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCACAGGAAAGTGCAAACTaGCTCCACACAGATGTTCCA +
Preference number: 4 (lower is better)
Translates to: QDCQKAQESANWLHTDVPQESAN*LHTDVP
Trigger: TGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTG...TGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp CCTGGCCACTGCATCTGGAAGGGTCATACATCTGACTGGTCATCACCCACTAATGGTCATACATCTGACTaGTCATCACCCACTAATCAC +
Preference number: 4 (lower is better)
Translates to: PGHCIWKGHTSDWSSPTNGHTSD*SSPTNH
Trigger: GTGATTAGTGGGTGATGACCAGTCAGATGTATGACC...ATTAGTGGGTGATGACCAGTCAGATGTATGACCCTTCCAGATGCAGTGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR CCA 90 bp CAAAGTCAGAACTTTTCTAGGCTTCCTGATACCAGAAAGACATCCATGTTTACACCAGGGCAGCTGTCCTaGCCACTGCATCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QSQNFSRLPDTRKTSMFTPGQLS*PLHLEG
Trigger: CCCTTCCAGATGCAGTGGCCAGGACAGCTGCCCTGG...TGTAAACATGGATGTCTTTCTGGTATCAGGAAGCCTAGAAAAGTTCTGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR CCA 90 bp TCCCATCTGCAGCCTTTTCGGCAAATTATTCCCATTTGTAAAGCTGGTGCCCTCCAAGTTGAATCCTCGTaGCATTTCCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHLQPFRQIIPICKAGALQVESS*HFPSAA
Trigger: GGCTGCAGATGGGAAATGCCACGAGGATTCAACTTG...GAGGGCACCAGCTTTACAAATGGGAATAATTTGCCGAAAAGGCTGCAGATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR TCA 90 bp TTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTGCTTGCCGTGCTGAATaGAATGAACAGGACACTGGT +
Preference number: 4 (lower is better)
Translates to: LKDNLGHRFPRVTTRKTLACRAE*NEQDTG
Trigger: ACCAGTGTCCTGTTCATTTCATTCAGCACGGCAAGC...AAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTGCTTGCCGTGCTGAATaGAATGAACAGGACACTGGT +
Preference number: 4 (lower is better)
Translates to: TYRESAPATGVTFMPILGACRAE*NEQDTG
Trigger: ACCAGTGTCCTGTTCATTTCATTCAGCACGGCAAGC...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGTCTGCATCTCGACCGTaGCGTACATGGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRSASRP*RTWTQG
Trigger: TCCCTGTGTCCATGTACGTCACGGTCGAGATGCAGA...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGATTAATTTAACAATCTaGGCCTTCTGCAAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LLIKQEYQQMPNASGPQLINLTI*AFCKGA
Trigger: GGCGCCCTTGCAGAAGGCTCAGATTGTTAAATTAAT...CAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp GCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATCAACATGCTGCTCCATaGGGCTGTACAGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: ASSLNKLLIKQEYQQMPNQHAAP*GCTGGW
Trigger: CCATCCTCCTGTACAGCCTCATGGAGCAGCATGTTG...ATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCGGAGCGTCCAGTAGATaGACACGCGCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISGASSR*TRASAA
Trigger: TGCTGCGCTGGCGCGTGTTCATCTACTGGACGCTCC...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTATGTGGACATGGCTATaGGTGAGCGTGGAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: TYRESAPATGVTFMPILGMWTWL*VSVEPK
Trigger: TTTTGGCTCCACGCTCACTCATAGCCATGTCCACAT...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TTTCCCATCTGCAGCCTTTTCGGCAAATTATTCCCATTTGTAAAGCTGGTGCCCAAGAACATGGCCGCGTaGGACGTTTGGAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: FPICSLFGKLFPFVKLVPKNMAA*DVWSLM
Trigger: CATCAAACTCCAAACGTCTCACGCGGCCATGTTCTT...GGGCACCAGCTTTACAAATGGGAATAATTTGCCGAAAAGGCTGCAGATGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACCTGCACAGTATCTGTaGACGAGCGTCCGCACGAGG +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKRPAQYL*TSVRTR
Trigger: CCTCGTGCGGACGCTCGTGCACAGATACTGTGCAGG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp AAATGCAGCATAAACCATCCAGCAAGACTTGAAGAATCTCCATTTGAGCTATGTGGCGCAGGACCGTCTTaGTCAGCTCGAACAGGACGT +
Preference number: 4 (lower is better)
Translates to: KCSINHPARLEESPFELCGAGPS*SARTGR
Trigger: ACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCC...ACATAGCTCAAATGGAGATTCTTCAAGTCTTGCTGGATGGTTTATGCTGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTTCAATGCCAACATGCTaGTCCATGAGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTSMPTC*SMRLYR
Trigger: CCTGTACAGCCTCATGGAGCAGCATGTTGGCATTGA...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AAACGTCCAGTTTCCAAATATCTGCCCGTTGCTTGTCACAGTTGTATTTTCAAAACGCCTGCAGGAGCCTaGGCATGTGTTTGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: KRPVSKYLPVACHSCIFKTPAGA*ACVCGA
Trigger: CGCACCACAAACACATGCGCAGGCTCCTGCAGGCGT...TTTGAAAATACAACTGTGACAAGCAACGGGCAGATATTTGGAAACTGGACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR CCA 90 bp ATGGTTTTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGCTGTGTGGAAGCCTTTaGTGTCCTGGACCGCGTAAT +
Preference number: 4 (lower is better)
Translates to: MVLKDNLGHRFPRVTTRKLCGSL*CPGPRN
Trigger: ATTACGCGGTCCAGGACACCAAAGGCTTCCACACAG...CTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCTCACACTCGATGGTaGCGTGAAGTCCGCCGATAT +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQAHTRW*REVRRY
Trigger: ATATCGGCGGACTTCACGCCACCATCGAGTGTGAGC...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GAAGAATCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCTGCTCACACTCGATaGTGGCGTGAAGTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: EESPFELCCFQFKQAPDQAAHTR*WREVRR
Trigger: TCGGCGGACTTCACGCCACCATCGAGTGTGAGCAGC...TTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGGCTCCTCGATCCTCTTaGTGGTCAGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLAPRSS*WSAPAA
Trigger: AGCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGC...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTCGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATAATCATGTCGATTCCTaGCGACTCTGGGAGGACCTG +
Preference number: 4 (lower is better)
Translates to: ASSLNKLLIKQEYQQMPNNHVDS*RLWEDL
Trigger: CAGGTCCTCCCAGAGTCGTCAGGAATCGACATGATT...ATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAACCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTT +
Preference number: 4 (lower is better)
Translates to: QRWWCFPERQQFQRLKSEPSSLV*CLSPYF
Trigger: AAAATAAGGTGACAAACATCACACCAAAGATGAGGG...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGTCAGAGGTACATGGTaGCTATCTCCACACAGGCAG +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQVRGTW*LSPHRQ
Trigger: CTGCCTGTGTGGAGATAGTCACCATGTACCTCTGAC...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AAAGTGCAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAGGAACAGATTCCTCTaGCTTTCCGACTCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: KVQTGSTQMFQMQHKPSSRNRFL*LSDSVF
Trigger: GAAAACGGAGTCGGAAAGGCAGAGGAATCTGTTCCT...GCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATGCAGCTGCGTGTTCCTaGGGAAGAGCTTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNAAACS*GRACRR
Trigger: ACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGC...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATTCGAACAGGACGTCGTaGAGGCTCTGCTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: LCCFQFKQAPDQARISADSNRTS*RLCSSI
Trigger: GATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGA...ATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTAAAGAAGAACACCAGTaGGTCAAACAGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSKEEHQ*VKQSQE
Trigger: CTCCTGGGACTGTTTGACGCACTGGTGTTCTTCTTT...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGTGTAGCAAATTATCGTaGCTTAAATGTGCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWCSKLS*LKCAVQ
Trigger: TTGAACAGCACATTTAAGGCACGATAATTTGCTACA...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGATCACACATGCTTTGGTaGATGTACACGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRSHMLW*MYTCVC
Trigger: ACACACACACGTGTACATGCACCAAAGCATGTGTGA...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGATATTGTGTAGGAGCATaGACACGCGTGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGYCVGA*TRVSVV
Trigger: TACCACAGACACGCGTGTGCATGCTCCTACACAATA...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCATGTGGTGCGTACATGTaGATGTGTACGTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSCGAYM*MCTCGS
Trigger: GCTCCCACACGTACACATGCACATGTACGCACCACA...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTCAGATTCAGGTCTCCTaGTTAGATAATCTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSQIQVS*LDNLEK
Trigger: TTTCTCTAGATTATCTAAGCAGGAGACCTGAATCTG...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp TATTTTGAGACTAAATGCATTCGTATCTGTAGGAGGCACACACTAGGTGCTCAGAGCTGTCCTGGCCACTaGATCTGGAAGGGTCATACA +
Preference number: 4 (lower is better)
Translates to: YFETKCIRICRRHTLGAQSCPGH*IWKGHT
Trigger: TGTATGACCCTTCCAGATGCAGTGGCCAGGACAGCT...CTGAGCACCTAGTGTGTGCCTCCTACAGATACGAATGCATTTAGTCTCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR CCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCACGTTACGCTCCACTCTaGCTCGGATCTGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSRYAPL*LGSGQL
Trigger: AAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACG...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTAGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGAATCATGTCGATTCCTaGCGACTCTGGGAGGACCTG +
Preference number: 4 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLNHVDS*RLWEDL
Trigger: CAGGTCCTCCCAGAGTCGTCAGGAATCGACATGATT...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTATTAATTTAACAATCTaGGCCTTCTGCAAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSINLTI*AFCKGA
Trigger: GGCGCCCTTGCAGAAGGCTCAGATTGTTAAATTAAT...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCAAAAACTGAGGGAAGATaGAGCAGACGTTCTTATAGA +
Preference number: 4 (lower is better)
Translates to: QDCQKAQESANWLHTDVPKTEGR*SRRSYR
Trigger: TCTATAAGAACGTCTGCTTCATCTTCCCTCAGTTTT...TGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTAGGTGGAAAATTGCATaGAGACCCTGCAACGTCATT +
Preference number: 4 (lower is better)
Translates to: PERQQFQRLKSESHTEMSRWKIA*RPCNVI
Trigger: AATGACGTTGCAGGGTCTTCATGCAATTTTCCACCT...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTGCAGCCTTTTCGGCAAATTATTCCCATTTGTAAAGCTGGTGCCCTCATTTGTAACAATCTGAGGCGGTaGGACCTAACGGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: LQPFRQIIPICKAGALICNNLRR*DLTEGF
Trigger: AAAACCTTCCGTTAGGTCTCACCGCCTCAGATTGTT...ACAAATGAGGGCACCAGCTTTACAAATGGGAATAATTTGCCGAAAAGGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR GCA 90 bp CCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTCTGCTGAATATCGAAGAATCTaGTCCTTTGCAAAACAGATA +
Preference number: 4 (lower is better)
Translates to: PGGYWKELPECCLVTLSAEYRRI*SFAKQI
Trigger: TATCTGTTTTGCAAAGGAGCAGATTCTTCGATATTC...AGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp CCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTCTGCTGCTAACGTGATTGGGTaGTCTTTTGAAAATTTGATT +
Preference number: 4 (lower is better)
Translates to: PGGYWKELPECCLVTLSAANVIG*SFENLI
Trigger: AATCAAATTTTCAAAAGAGCACCCAATCACGTTAGC...AGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTGCTAACGTGATTGGGTaGTCTTTTGAAAATTTGATT +
Preference number: 4 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCANVIG*SFENLI
Trigger: AATCAAATTTTCAAAAGAGCACCCAATCACGTTAGC...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGACACCTATGCCCACGTaGGCTTCCAGAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLTPMPT*ASRIML
Trigger: CAGCATGATTCTGGAAGCGCACGTGGGCATAGGTGT...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAACAAATATCTGCCCGTTaGTTGTCACAGTTGTATTTT +
Preference number: 4 (lower is better)
Translates to: QRWWCFPERQQFQRLKSEQISAR*LSQLYF
Trigger: AAAATACAACTGTGACAAGCAACGGGCAGATATTTG...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTACGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLRDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGATACACGTGCATGTTCTaGATGTCTGTAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGYTCMF*MSVGHT
Trigger: TGTGTGACCTACAGACATGCAGAACATGCACGTGTA...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCATACGTCTCTCTGCTGTaGATACACGTGTGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSYVSLL*IHVCES
Trigger: GCTCTCACACACGTGTATGCACAGCAGAGAGACGTA...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGTTTTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGCCTAGTTACTCTCTCTaGTCTCAGGAGAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: MVLKDNLGHRFPRVTTRKPSYSL*SQERLF
Trigger: AAACAGCCTCTCCTGAGAGCAGAGAGAGTAACTAGG...CTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAAAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp GCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATGAACTGCCAGAGTGCTaGCTAGTTACTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ASSLNKLLIKQEYQQMPNELPEC*LVTLSA
Trigger: AGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTC...ATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGACAGGACACTGGTTCATaGCATTGTCTGCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGQDTGS*HCLLYV
Trigger: GACATAAAGCAGACAATGCCATGAACCAGTGTCCTG...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCAGGACACTGGTTCATaGCATTGTCTGCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: STGKCKLAPHRCSKCSINQDTGS*HCLLYV
Trigger: GACATAAAGCAGACAATGCCATGAACCAGTGTCCTG...GTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp TTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTAATGCGTTTTATGGCTaGATTCTCCATCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LKDNLGHRFPRVTTRKTLNAFYG*ILHPSW
Trigger: CCAGCTTGGATGGAGAATCCAGCCATAAAACGCATT...AAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp AGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACTTATCAGGGCTTTGCTaGTCAGAATGCAGAGATACA +
Preference number: 4 (lower is better)
Translates to: STGKCKLAPHRCSKCSINLSGLC*SECRDT
Trigger: TGTATCTCTGCATTCTGATCAGCAAAGCCCTGATAA...GTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATCTCGTCGGGCGAGGATaGGATGTACACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: LCCFQFKQAPDQARISADLVGRG*DVHTGF
Trigger: AAATCCTGTGTGTACATCTCATCCTCGCCCGACGAG...ATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTAAAACTGAGGGAAGATaGAGCAGACGTTCTTATAGA +
Preference number: 4 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAKTEGR*SRRSYR
Trigger: TCTATAAGAACGTCTGCTTCATCTTCCCTCAGTTTT...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCAAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 4 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GACAAGCAAAACAAGATCTGCGTTTTAAATCTCTATCACGGTTGCTTCTATTTTGTGTTTTGGACGCCCTaGCCACCAGCTATCGAGGAC +
Preference number: 4 (lower is better)
Translates to: DKQNKICVLNLYHGCFYFVFWTP*PPAIED
Trigger: GTCCTCGATAGCTGGTGGTCAGGGCGTCCAAAACAC...AAAATAGAAGCAACCGTGATAGAGATTTAAAACGCAGATCTTGTTTTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR GCA 90 bp ACACACATGGTTTTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGCTTAAACTTTGGGATTaGATAGTCGCTGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: THMVLKDNLGHRFPRVTTLKLWD*IVAVPG
Trigger: GCCAGGAACAGCGACTATGCAATCCCAAAGTTTAAG...CGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAAAACCATGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp GCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATGAAAGCACAGGAAAGTaGAAACTGGCTCCACACAGA +
Preference number: 4 (lower is better)
Translates to: ASSLNKLLIKQEYQQMPNESTGK*KLAPHR
Trigger: TCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTC...ATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCAGACGATCCTGTTGTCTaGGTATCTCTGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSDDPVV*VSLWDV
Trigger: TACATCCCACAGAGATACCCAGACAACAGGATCGTC...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GAAGAATCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAATCATCGTCTTTCACCTaGACGGTGTGGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: EESPFELCCFQFKQAPDQSSSFT*TVWQRQ
Trigger: CTGTCTCTGCCACACCGTCCAGGTGAAAGACGATGA...TTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTACGTTACGCTCCACTCTaGCTCGGATCTGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLRYAPL*LGSGQL
Trigger: AAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACG...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AAACGTCCAGTTTCCAAATATCTGCCCGTTGCTTGTCACAGTTGTATTTTCAAAGGTGCTCTGGTAGCCTaGGCTCTTGTTCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: KRPVSKYLPVACHSCIFKGALVA*ALVPSE
Trigger: TTCTGATGGAACAAGAGCCCAGGCTACCAGAGCACC...TTTGAAAATACAACTGTGACAAGCAACGGGCAGATATTTGGAAACTGGACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR CCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGAAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKRSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AAATGCAGCATAAACCATCCAGCAAGACTTGAAGAATCTCCATTTGAGCTATGTTTTTTCTCTCGATCTTaGAGGGCCACTTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KCSINHPARLEESPFELCFFSRS*RATLAA
Trigger: GGCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAA...ACATAGCTCAAATGGAGATTCTTCAAGTCTTGCTGGATGGTTTATGCTGCATTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGATTAATTTAACAATCTaGGCCTTCTGCAAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRINLTI*AFCKGA
Trigger: GGCGCCCTTGCAGAAGGCTCAGATTGTTAAATTAAT...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 4 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGTACATGTACATATGTaGGTGATCCTGTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQVHVHM*VILCAS
Trigger: GCTTGCACACAGGATCACTCACATATGTACATGTAC...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAATCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCACGAAAGGGCTCACTCTaGCACATGTATTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: ESPFELCCFQFKQAPDQARKGSL*HMYFST
Trigger: TGTGCTGAAATACATGTGGCAGAGTGAGCCCTTTCG...TGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGAACGTCAATGCCAACATaGTGCTCCATGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKRTSMPT*CSMRLY
Trigger: GTACAGCCTCATGGAGCAGCATGTTGGCATTGACGT...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGATCAGAAACTCAGGCTaGTGGAAGTCTGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQIRNSG*WKSEKA
Trigger: TGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGAT...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTAGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 4 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGTGCTTACCTGTACATaGATGTGTGTATCACACGTC +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQVLTCT*MCVSHV
Trigger: GACGTGTGATACACACATGCATGTACAGGTAAGCAC...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGCATGTGTACGATGTGTaGACGTGTGTTTACACGTCT +
Preference number: 4 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQHVYDV*TCVYTS
Trigger: AGACGTGTAAACACACGTGCACACATCGTACACATG...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAAAGAATATCAGCAGATaGCGAATGCTTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SPFELCCFQFKQAPDQARKNISR*RMLLAL
Trigger: GAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTT...TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp GCCACTGCATCTGGAAGGGTCATACATCTGACTGGTCATCACCCACTAATCACATATTTTGAGACTAAATaGATTCGTATCTGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: ATASGRVIHLTGHHPLITYFETK*IRICRR
Trigger: CCTCCTACAGATACGAATGCATTTAGTCTCAAAATA...TGTGATTAGTGGGTGATGACCAGTCAGATGTATGACCCTTCCAGATGCAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGACTCTGGCTCGGATCTaGTCAACTTTGCCTTCTATC +
Preference number: 4 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLTLARI*STLPSI
Trigger: GATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGT...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp TCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAGTTCATGGCATTGTCTaGTTTATGTCGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: SPFELCCFQFKQAPDQARVHGIV*FMSKPV
Trigger: GACTGGCTTCGACATAAAGCAGACAATGCCATGAAC...TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGATGTTCAACTAATCACTaGCACCAGAAATACCAAGAA +
Preference number: 4 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGCSTNH*HQKYQE
Trigger: TTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACA...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACAAGCAAAACAAGATCTGCGTTTTAAATCTCTATCACGGTTGCTTCTATTTTGAGGCACACACTAGGTaGTCAGTAATGTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DKQNKICVLNLYHGCFYFEAHTR*SVMSAP
Trigger: GGGAGCTGACATTACTGAGCACCTAGTGTGTGCCTC...AAAATAGAAGCAACCGTGATAGAGATTTAAAACGCAGATCTTGTTTTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR CCA 90 bp GACAAGCAAAACAAGATCTGCGTTTTAAATCTCTATCACGGTTGCTTCTATTTTCCTGGCCACTGCATCTaGAAGGGTCATACATCTGAC +
Preference number: 4 (lower is better)
Translates to: DKQNKICVLNLYHGCFYFPGHCI*KGHTSD
Trigger: GTCAGATGTATGACCCTTCCAGATGCAGTGGCCAGG...AAAATAGAAGCAACCGTGATAGAGATTTAAAACGCAGATCTTGTTTTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR TCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGAAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTT +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKRRLLEV*ESIKMV
Trigger: AACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCT...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTAGCATCTTCTTCAAATaGTTAAACTTTGGGATTGCA +
Preference number: 4 (lower is better)
Translates to: LKDNLGHRFPRVTTRKTLSIFFK*LNFGIA
Trigger: TGCAATCCCAAAGTTTAAGCATTTGAAGAAGATGCT...AAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GAATCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCATCCAAAATGTGTACTTaGACGAGACGATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ESPFELCCFQFKQAPDQASKMCT*TRRSCC
Trigger: ACAACAGGATCGTCTCGTCCAAGTACACATTTTGGA...TGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGCTGGGAACTCATTTGTaGTGTACACATGAATGTGCA +
Preference number: 4 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLLGTHL*CTHECA
Trigger: TGCACATTCATGTGTACACCACAAATGAGTTCCCAG...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TCTCTATCACGGTTGCTTCTATTTTTAACAGGTGGTACCCTGCTAGATTGTTTAACTAATCACAGAAGCTaGCCCGACAAGCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: SLSRLLLFLTGGTLLDCLTNHRS*PDKQNK
Trigger: CTTGTTTTGCTTGTCGGGCCAGCTTCTGTGATTAGT...TAAACAATCTAGCAGGGTACCACCTGTTAAAAATAGAAGCAACCGTGATAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR TCA 90 bp GCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATCATTCTCCTTCTGACTaGGTCAAAACTCAAAATTTC +
Preference number: 4 (lower is better)
Translates to: ASSLNKLLIKQEYQQMPNHSPSD*VKTQNF
Trigger: GAAATTTTGAGTTTTGACTCAGTCAGAAGGAGAATG...ATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CCA 90 bp GCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATTCAAACCTTTCGATGTaGTTCTCCCTGTTTAATATC +
Preference number: 4 (lower is better)
Translates to: ASSLNKLLIKQEYQQMPNSNLSM*FSLFNI
Trigger: GATATTAAACAGGGAGAACCACATCGAAAGGTTTGA...ATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGATTCAGTACTAGTCAGTaGAAAACACATGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKRFSTSQ*KTHELS
Trigger: ACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAA...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GACAAGCAAAACAAGATCTGCGTTTTAAATCTCTATCACGGTTGCTTCTATTTTGTGGCATTTCCCATCTaGAGCCTTTTCGGCAAATTA +
Preference number: 4 (lower is better)
Translates to: DKQNKICVLNLYHGCFYFVAFPI*SLFGKL
Trigger: TAATTTGCCGAAAAGGCTGCAGATGGGAAATGCCAC...AAAATAGAAGCAACCGTGATAGAGATTTAAAACGCAGATCTTGTTTTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR TCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACATTCTCCTTCTGACTaGGTCAAAACTCAAAATTTC +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKRHSPSD*VKTQNF
Trigger: GAAATTTTGAGTTTTGACTCAGTCAGAAGGAGAATG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGAGTAAATACTAACTACTaGGAGGTGGAAAATTGCATG +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKRVNTNY*EVENCM
Trigger: CATGCAATTTTCCACCTCGCAGTAGTTAGTATTTAC...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AAATGCAGCATAAACCATCCAGCAAGACTTGAAGAATCTCCATTTGAGCTATGTCAAATGCTTAAACTTTaGGATTGCATAGTCGCTGTT +
Preference number: 4 (lower is better)
Translates to: KCSINHPARLEESPFELCQMLKL*DCIVAV
Trigger: AACAGCGACTATGCAATCCCAAAGTTTAAGCATTTG...ACATAGCTCAAATGGAGATTCTTCAAGTCTTGCTGGATGGTTTATGCTGCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR TCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATCAAAGTGCTCAAAGTTaGCATTACTTGCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNQSAQS*HYLLQS
Trigger: ACTTTGAAGCAAGTAATGTCAACTTTGAGCACTTTG...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGAGAATATCGAAGAATCTaGTCCTTTGCAAAACAGATA +
Preference number: 4 (lower is better)
Translates to: CLKCAVQLITATRNTKKREYRRI*SFAKQI
Trigger: TATCTGTTTTGCAAAGGAGCAGATTCTTCGATATTC...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATCAGGTGTTACATTTATaGCCATATTGGGTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNQVLHL*PYWVPK
Trigger: TTTAGGAACCCAATATGGGCATAAATGTAACACCTG...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS CCA 90 bp CGCGCTCTGGCGCCTTCTCTCTCCCCGTCGGTCCGCCCGCTCGGTTaGGCTCGGCTGGAGCACCCCGGCCGCGGCGGAGCCTGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: RALAPSLSPSVRPLG*ARLEHPGRGGACAL
Trigger: CAGAGCGCAGGCTCCGCCGCGGCCGGGGTGCTCCAGCCGAGCCCAACCGAGCGGGCGGACCGACGGGGAGAGAGAAGGCGCCAGAGCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375645.8
CDS CCA 90 bp CGCCTTCTCTCTCCCCGTCGGTCCGCCCGCTCGGTTGGGCTCGGCTaGAGCACCCCGGCCGCGGCGGAGCCTGCGCTCTGCTCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: RLLSPRRSARSVGLG*STPAAAEPALCSSR
Trigger: TCGGGAGGAGCAGAGCGCAGGCTCCGCCGCGGCCGGGGTGCTCCAGCCGAGCCCAACCGAGCGGGCGGACCGACGGGGAGAGAGAAGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375645.8
CDS CCA 90 bp TCCACTGGCGGCAAGGCTGCTGCTCGGGGCCGCGCGCGCGCGCTCTaGCGCCTTCTCTCTCCCCGTCGGTCCGCCCGCTCGGTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: STGGKAAARGRARAL*RLLSPRRSARSVGL
Trigger: GAGCCCAACCGAGCGGGCGGACCGACGGGGAGAGAGAAGGCGCCAGAGCGCGCGCGCGCGGCCCCGAGCAGCAGCCTTGCCGCCAGTGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375645.8
CDS-3UTR CAA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGCGGCCGTCTCCATCTaGTCTCCCGTGAGAACCCAG +
Preference number: 5 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPAAVSI*SPVRTQ
Trigger: CTGGGTTCTCACGGGAGACAAGATGGAGACGGCCGC...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLAAGVA*SSHVAL
Trigger: CAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGTGAGAACCCAGACTTaGATCCCGGCCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGVRTQT*IPAFCR
Trigger: CCTGCAGAAGGCCGGGATCAAAGTCTGGGTTCTCAC...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS CCA 90 bp GACAGAGGGAGGCAGCCGCCACCTACCGACGTGGCCCACCCCACATaGGAGGAGGGATCCACGTGCACCCAGCGTGCGGCAGAACAGCAC +
Preference number: 5 (lower is better)
Translates to: DRGRQPPPTDVAHPT*EEGSTCTQRAAEQH
Trigger: GTGCTGTTCTGCCGCACGCTGGGTGCACGTGGATCCCTCCTCCCATGTGGGGTGGGCCACGTCGGTAGGTGGCGGCTGCCTCCCTCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS-3UTR CAA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGCCTGGCGGCCTTCCTaGCCGATGACACCTATGCCC +
Preference number: 5 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLAWRPS*PMTPMP
Trigger: GGGCATAGGTGTCATCGGCAAGGAAGGCCGCCAGGC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: EGTWGRRARRAELQCGRRVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp CGCCTGGTGGACGCTGCGTCAGAGCACGTGGACTCAGGGCTCTGGTaGTGGGCATGGCCCTGCTGCCCCGTGTCTACCATCCCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: RLVDAASEHVDSGLW*WAWPCCPVSTIPGA
Trigger: CGCACCTGGGATGGTAGACACGGGGCAGCAGGGCCATGCCCATCACCAGAGCCCTGAGTCCACGTGCTCTGACGCAGCGTCCACCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS-3UTR CAA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGGCGCAGGACCGTCTaGCTCAGCTCGAACAGGACG +
Preference number: 5 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLWRRTV*LSSNRT
Trigger: CGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCA...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLAAGVA*SSHVAL
Trigger: CAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGC...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGCGCACACACCATTGTTaGCGGGGGCAGCGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: WPCPPTWHCLLHEAAGDGRTHHC*RGQRGQ
Trigger: CTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCG...CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGCAGGAGCTTGCACGTTaGTGGTGGGTACATGTACAT +
Preference number: 5 (lower is better)
Translates to: EGTWGRRARRAELQCGRRQELAR*WWVHVH
Trigger: ATGTACATGTACCCACCACAAACGTGCAAGCTCCTG...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGGGAGCCTGTGCGTGTTaGGGGTGTGTCCATGTGCAT +
Preference number: 5 (lower is better)
Translates to: AGVALSSHVALPSPRGGRGACAC*GCVHVH
Trigger: ATGCACATGGACACACCCCAAACACGCACAGGCTCC...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTAGCCTGCGCATGTGTTaGTGGTGCGTACATGTGCAT +
Preference number: 5 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGSLRMC*WCVHVH
Trigger: ATGCACATGTACGCACCACAAACACATGCGCAGGCT...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCAGGGGAGGTTTCAGCTaGCGAGGCTGGACCTCCCTA +
Preference number: 5 (lower is better)
Translates to: CWVQAARVPCSRARPVTPRGGFS*RGWTSL
Trigger: TAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCT...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS GCA 90 bp TGCGCCTTGGCCGCCGTAGGAGGTCCTTCAGGAGGGGCCCATCGCTaGTCTGTGCGGCCTGGACTGGAGCCTTGTGCTTCACACCCCTCT +
Preference number: 5 (lower is better)
Translates to: CALAAVGGPSGGAHR*SVRPGLEPCASHPS
Trigger: AGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTGAAGGACCTCCTACGGCGGCCAAGGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415301.2
ENST00000479193.1
CDS GCA 90 bp GGACTTCCCGACGTGAGGCTGCTGTACCCAGCGCCTGGTGGACGCTaGGTCAGAGCACGTGGACTCAGGGCTCTGGTGATGGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: GLPDVRLLYPAPGGR*VRARGLRALVMGMA
Trigger: GGCCATGCCCATCACCAGAGCCCTGAGTCCACGTGCTCTGACGCAGCGTCCACCAGGCGCTGGGTACAGCAGCCTCACGTCGGGAAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS-3UTR CAA 90 bp CCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGGGAGGACCTGCCCGTaGCAGATGACGTGGGGCACG +
Preference number: 5 (lower is better)
Translates to: PLVWLNNHSAGSRRPGCHGRTCP*QMTWGT
Trigger: CGTGCCCCACGTCATCTGCAACGGGCAGGTCCTCCC...ATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGCGGCCGTCTCCATCTaGTCTCCCGTGAGAACCCAG +
Preference number: 5 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATAAVSI*SPVRTQ
Trigger: CTGGGTTCTCACGGGAGACAAGATGGAGACGGCCGC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCTGGCGCAGGACCGTCTaGCTCAGCTCGAACAGGACG +
Preference number: 5 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPWRRTV*LSSNRT
Trigger: CGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCA...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGCCTGGCGGCCTTCCTaGCCGATGACACCTATGCCC +
Preference number: 5 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPAWRPS*PMTPMP
Trigger: GGGCATAGGTGTCATCGGCAAGGAAGGCCGCCAGGC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACA +
Preference number: 5 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRPSGFH*PEPRST
Trigger: TGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTCAGGAGCTTGCACGTTaGTGGTGGGTACATGTACAT +
Preference number: 5 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPQELAR*WWVHVH
Trigger: ATGTACATGTACCCACCACAAACGTGCAAGCTCCTG...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCCAGGGCACCAAGCCTaGCTCACAGAGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRPGHQA*LTEQLV
Trigger: CACCAGCTGCTCTGTGAGCAAGGCTTGGTGCCCTGG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCAGACACAGGCTGGGTaGACTGGGGCTTTAGGCGGC +
Preference number: 5 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRQTQAG*TGALGG
Trigger: GCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTG...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCCGGATGGTCACCCTGTaGGAGACGCTGGCCGCATCT +
Preference number: 5 (lower is better)
Translates to: EAAGVALSSHVALPSPRGRMVTL*ETLAAS
Trigger: AGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCG...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS GCA 90 bp GCTCCTCGATCCTCTTGGTGGTCAGCTCCAGCAGCTGCGTGTTCCTaGGGAAGAGCTTGCAGGCGTAGCACGTGGCCGCGGCCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: APRSSWWSAPAAACS*GRACRRSTWPRPSP
Trigger: TGGAGACGGCCGCGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS CCA 90 bp AGTGGTGGCGGGACTTCCCGACGTGAGGCTGCTGTACCCAGCGCCTaGTGGACGCTGCGTCAGAGCACGTGGACTCAGGGCTCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: SGGGTSRREAAVPSA*WTLRQSTWTQGSGD
Trigger: ATCACCAGAGCCCTGAGTCCACGTGCTCTGACGCAGCGTCCACCAGGCGCTGGGTACAGCAGCCTCACGTCGGGAAGTCCCGCCACCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS CCA 90 bp TCTCCCAATCCTAAGGCCAGGGCCCTGAGGCACCCCCGCCCCGGCTaGGGACACTCCGTACCTGGACTCTCTCTGTTGCTGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: SPNPKARALRHPRPG*GHSVPGLSLLLLAT
Trigger: TGTGGCCAACAGCAACAGAGAGAGTCCAGGTACGGAGTGTCCCCAGCCGGGGCGGGGGTGCCTCAGGGCCCTGGCCTTAGGATTGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495930.1
CDS-3UTR CAA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGCGGCCGTCTCCATCTaGTCTCCCGTGAGAACCCAG +
Preference number: 5 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKAAVSI*SPVRTQ
Trigger: CTGGGTTCTCACGGGAGACAAGATGGAGACGGCCGC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCGGCACAGGACTTTCTaGAGGACGTCGGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRRHRTF*RTSGRR
Trigger: CCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCCG...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 5 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCTGCACGAACACCACCTaGGTGTTGACCCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATCTNTT*VLTPPR
Trigger: CCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCA...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGACAGCAGCCCTGGGGTaGCTAACCCACCCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPTAALG*LTHPEQ
Trigger: CTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGT...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGCCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACA +
Preference number: 5 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPPSGFH*PEPRST
Trigger: TGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp TGGAGCCTTGTGCTTCACACCCCTCTGCAAGGCGAGGAAAGATACTaGGCGACGTGGGCCACACGGGGCCACCAGGAGTGCTCGGGCCTC +
Preference number: 5 (lower is better)
Translates to: WSLVLHTPLQGEERY*ATWATRGHQECSGL
Trigger: GAGGCCCGAGCACTCCTGGTGGCCCCGTGTGGCCCACGTCGCTCAGTATCTTTCCTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS GCA 90 bp TCTTGGTGGTCAGCTCCAGCAGCTGCGTGTTCCTGCGGAAGAGCTTaGAGGCGTAGCACGTGGCCGCGGCCGTCTCCATCTTGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: SWWSAPAAACSCGRA*RRSTWPRPSPSCLP
Trigger: CGGGAGACAAGATGGAGACGGCCGCGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGACCACCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 90 bp CCGCTGTGGCGCAGGACCGTCTTGCTCAGCTCGAACAGGACGTCGTaGAGGCTCTGCTCCTCGATCCTCTTGGTGGTCAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PLWRRTVLLSSNRTS*RLCSSILLVVSSSS
Trigger: GCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCACAGCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 90 bp CTGCTCTGTGCGGCCTGGACTGGAGCCTTGTGCTTCACACCCCTCTaGAAGGCGAGGAAAGATACTGAGCGACGTGGGCCACACGGGGCC +
Preference number: 5 (lower is better)
Translates to: LLCAAWTGALCFTPL*KARKDTERRGPHGA
Trigger: GGCCCCGTGTGGCCCACGTCGCTCAGTATCTTTCCTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS CCA 90 bp GTTGGAGTCTGCATGGGGTGTCATGGAGCTGCCAGGGCGAGGGCTTaGGGCGTCTTGGGAAAACACTGTCCCAGCAGGGCCGCTCCCATG +
Preference number: 5 (lower is better)
Translates to: VGVCMGCHGAARARA*GVLGKHCPSRAAPM
Trigger: CATGGGAGCGGCCCTGCTGGGACAGTGTTTTCCCAAGACGCCCCAAGCCCTCGCCCTGGCAGCTCCATGACACCCCATGCAGACTCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS-3UTR CAA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAGTGAGAACCCAGACTTaGATCCCGGCCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGVRTQT*IPAFCR
Trigger: CCTGCAGAAGGCCGGGATCAAAGTCTGGGTTCTCAC...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATCGCAGCAGGGCATTCTaGGCGACGTCCCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: PLVWLNNHSAGSRRPGCHRSRAF*ATSLYR
Trigger: CCTGTACAGGGACGTCGCCAAGAATGCCCTGCTGCG...ATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGCTCTCTCTGTTGCTGTaGGCCACAGCTGCCGGCACA +
Preference number: 5 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWLSLLL*ATAAGT
Trigger: TGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAG...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGTGGACTGACGGCTCCGTGCCCTGGCGAGTGGCTGATGGACATCCTGGCACTACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: QWTDGSVPWRVADGHPGTTGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...AGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAG +
Preference number: 5 (lower is better)
Translates to: QQPQCWVQAARVPCSRARNTTLV*TPPRGQ
Trigger: CTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT...CCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAG +
Preference number: 5 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGNTTLV*TPPRGQ
Trigger: CTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACA +
Preference number: 5 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHAPSGFH*PEPRST
Trigger: TGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGAAAACGCACACACCATaGTTTGCGGGGGCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGKTHTP*FAGAAW
Trigger: CCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTT...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCATGTGTGCAGGAGCTaGCACGTTTGTGGTGGGTAC +
Preference number: 5 (lower is better)
Translates to: QCWVQAARVPCSRARPVTHVCRS*HVCGGY
Trigger: GTACCCACCACAAACGTGCAAGCTCCTGCACACATG...GGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCAAGCCTGTAGGAGCTaGTACATGTGTGCTTACCTG +
Preference number: 5 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGQACRS*YMCAYL
Trigger: CAGGTAAGCACACATGTACAAGCTCCTACAGGCTTG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGTGGACTGACGGCTCCGTGCCCTGGCGAGTGGCTGATGGACATCCTGGCACTCCAGGGCACCAAGCCTaGCTCACAGAGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QWTDGSVPWRVADGHPGTPGHQA*LTEQLV
Trigger: CACCAGCTGCTCTGTGAGCAAGGCTTGGTGCCCTGG...AGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp CATGAGCCTTCCCGGTCACACACGAGGGTGGTGACGGGGGTGTCCTaGATGCACCTGCGTGCTGCCATGGGCCTTTGTCTAGCGAAGGGG +
Preference number: 5 (lower is better)
Translates to: HEPSRSHTRVVTGVS*MHLRAAMGLCLAKG
Trigger: CCCCTTCGCTAGACAAAGGCCCATGGCAGCACGCAGGTGCATTCAGGACACCCCCGTCACCACCCTCGTGTGTGACCGGGAAGGCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS GCA 90 bp ACAGGTTGTCTCTGGTCAGGCTCCCGCTGTGGCGCAGGACCGTCTTaGTCAGCTCGAACAGGACGTCGTGCAGGCTCTGCTCCTCGATCC +
Preference number: 5 (lower is better)
Translates to: TGCLWSGSRCGAGPS*SARTGRRAGSAPRS
Trigger: GGATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGACCAGAGACAACCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 90 bp GTCACACACGAGGGTGGTGACGGGGGTGTCCTGAATGCACCTGCGTaGTGCCATGGGCCTTTGTCTAGCGAAGGGGTGACCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: VTHEGGDGGVLNAPA*CHGPLSSEGVTWPP
Trigger: TGGTGGCCAGGTCACCCCTTCGCTAGACAAAGGCCCATGGCAGCACGCAGGTGCATTCAGGACACCCCCGTCACCACCCTCGTGTGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 90 bp GGCACGGCAGGCCCTCCTCATCCTCAGGGGTACATTCCCAGACCCTaGGGGGATGCAGAGTCTGCGGATGGTCCTGAACCCTGTCTATGC +
Preference number: 5 (lower is better)
Translates to: GTAGPPHPQGYIPRP*GDAESADGPEPCLC
Trigger: GCATAGACAGGGTTCAGGACCATCCGCAGACTCTGCATCCCCCCAGGGTCTGGGAATGTACCCCTGAGGATGAGGAGGGCCTGCCGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 90 bp CGTAGGAGGTCCTTCAGGAGGGGCCCATCGCTGCTCTGTGCGGCCTaGACTGGAGCCTTGTGCTTCACACCCCTCTGCAAGGCGAGGAAA +
Preference number: 5 (lower is better)
Translates to: RRRSFRRGPSLLCAA*TGALCFTPLCKARK
Trigger: TTTCCTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTGAAGGACCTCCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS-3UTR CAA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGACGAGACGATCCTGTaGTCTGGGTATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATDETIL*SGYLCG
Trigger: CCCACAGAGATACCCAGACAACAGGATCGTCTCGTC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp TGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGTGTCCCAGCTCTTCATaGAGGTCCGACGTGTTCACC +
Preference number: 5 (lower is better)
Translates to: WPCPPTWHCLLHEAAGDGCPSSS*RSDVFT
Trigger: GGTGAACACGTCGGACCTCAATGAAGAGCTGGGACA...CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCAGGGTCGGGTCTCTCTaGAGCACGTCAATGCCAACA +
Preference number: 5 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPRVGSL*STSMPT
Trigger: TGTTGGCATTGACGTGCTCAAGAGAGACCCGACCCT...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: AGQILRRRRALRGDMGTRTGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: QGLPITAALGLLTHPEQRTGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCAAGVA*SSHVAL
Trigger: CAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGC...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTTGCACGAACACCACCTaGGTGTTGACCCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHACTNTT*VLTPPR
Trigger: CCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCA...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGCCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACA +
Preference number: 5 (lower is better)
Translates to: AGQILRRRRALRGDMGTRPSGFH*PEPRST
Trigger: TGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTACAGTGTGCACTTGTTaGTGGCACATGTGTGTATAT +
Preference number: 5 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGTVCTC*WHMCVY
Trigger: ATATACACACATGTGCCACAAACAAGTGCACACTGT...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp CTCCCTCCCGTTGACGCTGGGGGACGAGTCAATCATGTCGATTCCTaGCGACTCTGGGAGGACCTGCCCGTTGCAGATGACGTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: LPPVDAGGRVNHVDS*RLWEDLPVADDVGH
Trigger: GTGCCCCACGTCATCTGCAACGGGCAGGTCCTCCCAGAGTCGTCAGGAATCGACATGATTGACTCGTCCCCCAGCGTCAACGGGAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS TCA 90 bp GCTCTGGTAGCCTGGGCTCTGCAGAGAGGCAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTGGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: ALVAWALQRGKRGEF*VAVPRLCAPILDSL
Trigger: GAGAGAGTCCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000419631.1
CDS TCA 90 bp GACAGGTGCTCTGGTAGCCTGGGCTCTGCAGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTGGA +
Preference number: 5 (lower is better)
Translates to: DRCSGSLGSAERQEG*ILSRGPEAVRTHSG
Trigger: TCCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000419631.1
CDS TCA 90 bp TTGTGGCATCAAGTGGCTCAGACAAGGGTCGTGCCACCCTGTGCGTaGCCTGTTGCTAACACCGTGAGGGGGAGCGGCGACCCTCCTACC +
Preference number: 5 (lower is better)
Translates to: LWHQVAQTRVVPPCA*PVANTVRGSGDPPT
Trigger: GGTAGGAGGGTCGCCGCTCCCCCTCACGGTGTTAGCAACAGGTCACGCACAGGGTGGCACGACCCTTGTCTGAGCCACTTGATGCCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS TCA 90 bp CTCCTGCAGGAACTGCTAGACTCAACTCAGGACACACCCTCGTCCTaGGGGCAGGCCGGGCGGGATCCACCCCACCAGAGAAGCCATATG +
Preference number: 5 (lower is better)
Translates to: LLQELLDSTQDTPSS*GQAGRDPPHQRSHM
Trigger: CATATGGCTTCTCTGGTGGGGTGGATCCCGCCCGGCCTGCCCTCAGGACGAGGGTGTGTCCTGAGTTGAGTCTAGCAGTTCCTGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS GCA 90 bp CGCAGGACCGTCTTGCTCAGCTCGAACAGGACGTCGTGCAGGCTCTaGTCCTCGATCCTCTTGGTGGTCAGCTCCAGCAGCTGCGTGTTC +
Preference number: 5 (lower is better)
Translates to: RRTVLLSSNRTSCRL*SSILLVVSSSSCVF
Trigger: GAACACGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 90 bp AGGAGGGGCCCATCGCTGCTCTGTGCGGCCTGGACTGGAGCCTTGTaGTTCACACCCCTCTGCAAGGCGAGGAAAGATACTGAGCGACGT +
Preference number: 5 (lower is better)
Translates to: RRGPSLLCAAWTGAL*FTPLCKARKDTERR
Trigger: ACGTCGCTCAGTATCTTTCCTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS CCA 90 bp GCTCGAACAGGACGTCGTGCAGGCTCTGCTCCTCGATCCTCTTGGTaGTCAGCTCCAGCAGCTGCGTGTTCCTGCGGAAGAGCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: ARTGRRAGSAPRSSW*SAPAAACSCGRACR
Trigger: CCTGCAAGCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS CCA 90 bp TCTGCTGAAAGTCCGGACAGGTTGTCTCTGGTCAGGCTCCCGCTGTaGCGCAGGACCGTCTTGCTCAGCTCGAACAGGACGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SAESPDRLSLVRLPL*RRTVLLSSNRTSCR
Trigger: CCTGCACGACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCGGACTTTCAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS CCA 90 bp CGTAGGAGGTCCTTCAGGAGGGGCCCATCGCTGCTCTGTGCGGCCTaGACTGGAGCCTTGTGCTTCACACCCCTCTGGACTCTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: RRRSFRRGPSLLCAA*TGALCFTPLWTLSV
Trigger: AACAGAGAGAGTCCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTGAAGGACCTCCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415301.2
CDS CCA 90 bp GCACCTGCGTGCTGCCATGGGCCTTTGTCTAGCGAAGGGGTGACCTaGCCACCAGGATGTGCCAGCAGCAAGGACGAAGCTCACCTATGC +
Preference number: 5 (lower is better)
Translates to: APACCHGPLSSEGVT*PPGCASSKDEAHLC
Trigger: GCATAGGTGAGCTTCGTCCTTGCTGCTGGCACATCCTGGTGGCCAGGTCACCCCTTCGCTAGACAAAGGCCCATGGCAGCACGCAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 90 bp GAGGTCCTTCAGGAGGGGCCCATCGCTGCTCTGTGCGGCCTGGACTaGAGCCTTGTGCTTCACACCCCTCTGCAAGGCGAGGAAAGATAC +
Preference number: 5 (lower is better)
Translates to: EVLQEGPIAALCGLD*SLVLHTPLQGEERY
Trigger: GTATCTTTCCTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTGAAGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS-3UTR CAA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCTCGCGCTCCCTCCCGTaGACGCTGGGGGACGAGTCA +
Preference number: 5 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGASRSLP*TLGDES
Trigger: TGACTCGTCCCCCAGCGTCAACGGGAGGGAGCGCGA...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGGAAAGTCCGGACAGGTaGTCTCTGGTCAGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: STSETPSGFHLPEPRSTAESPDR*SLVRLP
Trigger: CGGGAGCCTGACCAGAGACAACCTGTCCGGACTTTC...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCGGCACAGGACTTTCTaGAGGACGTCGGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: HRAAGVSEAATSPPGPALRHRTF*RTSGRR
Trigger: CCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCCG...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: QGLPITAALGLLTHPEQRNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGCGGATTGGAGGGTTGTaGAGTAAAGGACGCACCACC +
Preference number: 5 (lower is better)
Translates to: GLCMTARRVGQQNVPPALRIGGL*SKGRTT
Trigger: GGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCG...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGIVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTACAGCAGCCCTGGGGTaGCTAACCCACCCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: PALAPAKSTFSRNSGLTATAALG*LTHPEQ
Trigger: CTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGT...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: EAAGVALSSHVALPSPRGVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCTGCGAGGTGGAAAATaGCATGAAGACCCTGCAACG +
Preference number: 5 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRLRGGK*HEDPAT
Trigger: CGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTGGAGCCTGTGCGTGTTaGGGGTGTGTCCATGTGCAT +
Preference number: 5 (lower is better)
Translates to: PVCHPRQPETGSGARTPPGACAC*GCVHVH
Trigger: ATGCACATGGACACACCCCAAACACGCACAGGCTCC...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp CACACAGGGCAGGGACGGGGAGAAGAACGGATGAAACCATCATCATaGGCCTTCCCGGTCACACACGAGGGTGGTGACGGGGGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: HTGQGRGEERMKPSS*AFPVTHEGGDGGVL
Trigger: CAGGACACCCCCGTCACCACCCTCGTGTGTGACCGGGAAGGCTCATGATGATGGTTTCATCCGTTCTTCTCCCCGTCCCTGCCCTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS TCA 90 bp GCTCTGGTAGCCTGGGCTCTGCAGAGAGGCAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTGCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: ALVAWALQRGKRGEF*VAVPRLCAPILLRE
Trigger: TTCTCTCAGCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS CCA 90 bp TCCGGCGATTTCCTGGGGCCGTCTACGCTGTCATCGTCTTTCACCTaGACGGTGTGGCAGAGACAGAGGGCCCGGAAAAACAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SGDFLGPSTLSSSFT*TVWQRQRARKNSSS
Trigger: CGAGGAGCTGTTTTTCCGGGCCCTCTGTCTCTGCCACACCGTCCAGGTGAAAGACGATGACAGCGTAGACGGCCCCAGGAAATCGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCCACTGGTTCATGGCATaGTCTGCTTTATGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPHWFMA*SALCRS
Trigger: GCTTCGACATAAAGCAGACAATGCCATGAACCAGTG...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCTCAGTCGCAGCTTTCGACTTaGTTTCCGAACGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: QGAHLPMPIQRPLTGAPQSQLST*FPNELA
Trigger: GGCAAGCTCGTTCGGAAACAAAGTCGAAAGCTGCGA...CTGAGGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATCCTTGAACTCCATGTaGTTTTCCGTGAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPSLNSM*FSVRVP
Trigger: CGGCACCCTCACGGAAAACAACATGGAGTTCAAGGA...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTTGGCGCAGGACCGTCTaGCTCAGCTCGAACAGGACG +
Preference number: 5 (lower is better)
Translates to: QPSICLPALAPAKSTFSRWRRTV*LSSNRT
Trigger: CGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCA...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATAGGGTCGGGTCTCTCTaGAGCACGTCAATGCCAACA +
Preference number: 5 (lower is better)
Translates to: PLVWLNNHSAGSRRPGCHRVGSL*STSMPT
Trigger: TGTTGGCATTGACGTGCTCAAGAGAGACCCGACCCT...ATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTCGGCACAGGACTTTCTaGAGGACGTCGGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCRHRTF*RTSGRR
Trigger: CCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCCG...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCACGGATTGGAGGGTTGTaGAGTAAAGGACGCACCACC +
Preference number: 5 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPRIGGL*SKGRTT
Trigger: GGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCG...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: PSICLPALAPAKSTFSRNVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATGTAGGAGCTCACACTaGTGTACACGTTTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPCRSSH*CTRLCA
Trigger: TGCACACAAACGTGTACACAAGTGTGAGCTCCTACA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCCAGGACAGTGTGCACTaGTTTGTGGCACATGTGTGT +
Preference number: 5 (lower is better)
Translates to: EAAGVALSSHVALPSPRGQDSVH*FVAHVC
Trigger: ACACACATGTGCCACAAACAAGTGCACACTGTCCTG...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCCCAGGGCACCAAGCCTaGCTCACAGAGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESPGHQA*LTEQLV
Trigger: CACCAGCTGCTCTGTGAGCAAGGCTTGGTGCCCTGG...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCGACGGTGTGGCCTGCTaGTTCGCCCTGTCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESDGVAC*FALSAQ
Trigger: CTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTC...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGCGCACCCATTCTGCTaGTTCCATCAGAAACTCAGG +
Preference number: 5 (lower is better)
Translates to: GLCMTARRVGQQNVPPALAHPFC*FHQKLR
Trigger: CCTGAGTTTCTGATGGAACAAGCAGAATGGGTGCGC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS TCA 90 bp GAGGCGGTGAGACCTAACGGAAGGTTTTCAGTGTTTTGGACGCCCTaGCCACCAGCTATCGAGGACGGGCGGGCAGCACCTGAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: EAVRPNGRFSVFWTP*PPAIEDGRAAPEPS
Trigger: AGAAGGCTCAGGTGCTGCCCGCCCGTCCTCGATAGCTGGTGGTCAGGGCGTCCAAAACACTGAAAACCTTCCGTTAGGTCTCACCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS TCA 90 bp GTGAATTCTGAGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTGCTaGGAGAACGAGACACATGGTCAGTCTCAGGGATACCCACGGGGC +
Preference number: 5 (lower is better)
Translates to: VNSESRSRGCAHPFC*ENETHGQSQGYPRG
Trigger: GCCCCGTGGGTATCCCTGAGACTGACCATGTGTCTCGTTCTCTCAGCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS GCA 90 bp CCTCTGCGCCCGGAGGTGGCTCCCTGTGTCCCACGTAGATGGTCCTaGTGTCCACCCAATTCTCTTCTCCTGCACAGTATCTGTGCACGA +
Preference number: 5 (lower is better)
Translates to: PLRPEVAPCVPRRWS*CPPNSLLLHSICAR
Trigger: TCGTGCACAGATACTGTGCAGGAGAAGAGAATTGGGTGGACAGCAGGACCATCTACGTGGGACACAGGGAGCCACCTCCGGGCGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000487903.5
CDS CCA 90 bp GTTGTCTGGGTATCTCTGTGGGATGTAGGCCTCTGCGCCCGGAGGTaGCTCCCTGTGTCCCACGTAGATGGTCCTGCTGTCCACCCAATT +
Preference number: 5 (lower is better)
Translates to: VVWVSLWDVGLCARR*LPVSHVDGPAVHPI
Trigger: AATTGGGTGGACAGCAGGACCATCTACGTGGGACACAGGGAGCCACCTCCGGGCGCAGAGGCCTACATCCCACAGAGATACCCAGACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000459908.5
ENST00000466946.5
ENST00000487903.5
CDS CCA 90 bp AGAACGAGACACATGGTCAGTCTCAGGGATACCCACGGGGCTGCCTaGGGTGACCTGAGCCACTCTGGGATGCACTCACTACCATCGCCT +
Preference number: 5 (lower is better)
Translates to: RTRHMVSLRDTHGAA*GDLSHSGMHSLPSP
Trigger: AGGCGATGGTAGTGAGTGCATCCCAGAGTGGCTCAGGTCACCCCAGGCAGCCCCGTGGGTATCCCTGAGACTGACCATGTGTCTCGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS-3UTR CAA 90 bp TGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGTCGATGCAGCACTCCTaGAACTCCATGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: WPCPPTWHCLLHEAAGDGSMQHS*NSMLFS
Trigger: GGAAAACAACATGGAGTTCAAGGAGTGCTGCATCGA...CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGTGAGAACCCAGACTTaGATCCCGGCCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AKPRHSARRGTLHPREAWVRTQT*IPAFCR
Trigger: CCTGCAGAAGGCCGGGATCAAAGTCTGGGTTCTCAC...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCAGGACGCGGCCGTCTCCATCTaGTCTCCCGTGAGAACCCAG +
Preference number: 5 (lower is better)
Translates to: RFPRVTTRKTLVPQLPQDAAVSI*SPVRTQ
Trigger: CTGGGTTCTCACGGGAGACAAGATGGAGACGGCCGC...GTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp TCCCACACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGTGCTCCTCGATCCTCTaGGTGGTCAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SHTGPRAAVTWDGTAVVMCSSIL*VVSSSS
Trigger: GCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGCA...CATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTGCCTGGCGGCCTTCCTaGCCGATGACACCTATGCCC +
Preference number: 5 (lower is better)
Translates to: QLRSARWLLEGTARVLPSAWRPS*PMTPMP
Trigger: GGGCATAGGTGTCATCGGCAAGGAAGGCCGCCAGGC...ACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp CTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGCTCTCTCTGTTGCTGTaGGCCACAGCTGCCGGCACA +
Preference number: 5 (lower is better)
Translates to: LGLLTHPEQRWTDPKTKELSLLL*ATAAGT
Trigger: TGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAG...CTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GTCTGCTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: VCSSQPSICLPALAPAKSNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...TGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACACAGCAGCCCTGGGGTaGCTAACCCACCCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHTAALG*LTHPEQ
Trigger: CTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGT...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGCGCACACACCATTGTTaGCGGGGGCAGCGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWRTHHC*RGQRGQ
Trigger: CTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCG...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGCGCATTCATCAGAGATaGGAACATTCAGTCAAAACT +
Preference number: 5 (lower is better)
Translates to: AGVALSSHVALPSPRGGRRIHQR*EHSVKT
Trigger: AGTTTTGACTGAATGTTCCAATCTCTGATGAATGCG...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGCTGCGAGGTGGAAAATaGCATGAAGACCCTGCAACG +
Preference number: 5 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLLRGGK*HEDPAT
Trigger: CGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAG...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCGGATGGTCACCCTGTaGGAGACGCTGGCCGCATCT +
Preference number: 5 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGARMVTL*ETLAAS
Trigger: AGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCG...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS TCA 90 bp AGAAGAACACCAGTGCGTCAAACAGTCCCAGGAGCGTCCAGTAGATaGACACGCGCCAGCGCAGCAGGGCATTCTTGGCGACGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: RRTPVRQTVPGASSR*TRASAAGHSWRRPC
Trigger: ACAGGGACGTCGCCAAGAATGCCCTGCTGCGCTGGCGCGTGTTCATCTACTGGACGCTCCTGGGACTGTTTGACGCACTGGTGTTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000415301.2
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp GATGAAACCATCATCATGAGCCTTCCCGGTCACACACGAGGGTGGTaGCGGGGGTGTCCTGAATGCACCTGCGTGCTGCCATGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: DETIIMSLPGHTRGW*RGCPECTCVLPWAF
Trigger: AAAGGCCCATGGCAGCACGCAGGTGCATTCAGGACACCCCCGTCACCACCCTCGTGTGTGACCGGGAAGGCTCATGATGATGGTTTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS GCA 90 bp CTGGTGATGGGCATGGCCCTGCTGCCCCGTGTCTACCATCCCAGGTaGGTGGAAGGCAGAGGAGCATCACCTTGTTCCATCAGAAACTCA +
Preference number: 5 (lower is better)
Translates to: LVMGMALLPRVYHPR*VEGRGASPCSIRNS
Trigger: TGAGTTTCTGATGGAACAAGGTGATGCTCCTCTGCCTTCCACGCACCTGGGATGGTAGACACGGGGCAGCAGGGCCATGCCCATCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS CCA 90 bp GCGGATGCTGGCAGGAGCAGATGTCTTCATGGCCTCCATGTCTGTTaGAGAGGCGACAAGCTATGTGCTCCGGCTGGCACACAGAAGACC +
Preference number: 5 (lower is better)
Translates to: ADAGRSRCLHGLHVC*RGDKLCAPAGTQKT
Trigger: GGTCTTCTGTGTGCCAGCCGGAGCACATAGCTTGTCGCCTCTCCAACAGACATGGAGGCCATGAAGACATCTGCTCCTGCCAGCATCCGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS-3UTR CAA 90 bp TGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGGTGTTTATCAGGGCTTaGCTGATCAGAATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: WPCPPTWHCLLHEAAGDGVFIRA*LIRMQR
Trigger: TCTCTGCATTCTGATCAGCAAAGCCCTGATAAACAC...CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTGAAAGTCCGGACAGGTaGTCTCTGGTCAGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCESPDR*SLVRLP
Trigger: CGGGAGCCTGACCAGAGACAACCTGTCCGGACTTTC...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACCGGCACAGGACTTTCTaGAGGACGTCGGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSICLPALAPAKSTFSRNRHRTF*RTSGRR
Trigger: CCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCCG...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RKRHVHSLHRLRTIHHTSNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...GCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 5 (lower is better)
Translates to: HRAAGVSEAATSPPGPALIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTTGCACGAACACCACCTaGGTGTTGACCCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCCTNTT*VLTPPR
Trigger: CCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCA...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: KRHVHSLHRLRTIHHTSIVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...AATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGACAGCAGCCCTGGGGTaGCTAACCCACCCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWTAALG*LTHPEQ
Trigger: CTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGT...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCATGTGTGCAGGAGCTaGCACGTTTGTGGTGGGTAC +
Preference number: 5 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFHVCRS*HVCGGY
Trigger: GTACCCACCACAAACGTGCAAGCTCCTGCACACATG...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCGGAGCCTGTGCGTGTTaGGGGTGTGTCCATGTGCAT +
Preference number: 5 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGIGACAC*GCVHVH
Trigger: ATGCACATGGACACACCCCAAACACGCACAGGCTCC...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS GCA 90 bp CCGCGCTGCAGCTCCGGCAGATTTCCAGGAAGAGCTCCCTGTAGTTaGCGGAACTCCCGTCTTCTCGAGGCTTCATTATCAGAGACAGTG +
Preference number: 5 (lower is better)
Translates to: PRCSSGRFPGRAPCS*RNSRLLEASLSETV
Trigger: CACTGTCTCTGATAATGAAGCCTCGAGAAGACGGGAGTTCCGGCAACTACAGGGAGCTCTTCCTGGAAATCTGCCGGAGCTGCAGCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000610419.1
CDS GCA 90 bp CCTCTGCGCCCGGAGGTGGCTCCCTGTGTCCCACGTAGATGGTCCTaGTGTCCACCCAATTCTCTTCTCCTGCACAGATTAGATGAGATC +
Preference number: 5 (lower is better)
Translates to: PLRPEVAPCVPRRWS*CPPNSLLLHRLDEI
Trigger: GATCTCATCTAATCTGTGCAGGAGAAGAGAATTGGGTGGACAGCAGGACCATCTACGTGGGACACAGGGAGCCACCTCCGGGCGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466946.5
CDS GCA 90 bp ATGGACGGGAAACCTACGAGCTTCCTCCCTGTAGCTGGCTTCCTGTaGAGTGAGCTCGAACGCCATACCGGTACCCAGAGACCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: MDGKPTSFLPVAGFL*SELERHTGTQRPLN
Trigger: GTTCAAGGGTCTCTGGGTACCGGTATGGCGTTCGAGCTCACTGCACAGGAAGCCAGCTACAGGGAGGAAGCTCGTAGGTTTCCCGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS CCA 90 bp AAATGTGTACTTGGACGAGACGATCCTGTTGTCTGGGTATCTCTGTaGGATGTAGGCCTCTGCGCCCGGAGGTGGCTCCCTGTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: KCVLGRDDPVVWVSL*DVGLCARRWLPVSH
Trigger: GTGGGACACAGGGAGCCACCTCCGGGCGCAGAGGCCTACATCCCACAGAGATACCCAGACAACAGGATCGTCTCGTCCAAGTACACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000466946.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAAGTCCGTGAATGCCTaGAGGAACAGATTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGKSVNA*RNRFLC
Trigger: GCAGAGGAATCTGTTCCTCAAGGCATTCACGGACTT...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCAGGGAGGACCTGCCCGTaGCAGATGACGTGGGGCACG +
Preference number: 5 (lower is better)
Translates to: QDCQKAQESANWLHTDVPGRTCP*QMTWGT
Trigger: CGTGCCCCACGTCATCTGCAACGGGCAGGTCCTCCC...TGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp GCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCCGGATCTGGTCAACTTaGCCTTCTATCACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: ATDSLGSQRGRRLYPSSLRIWST*PSITRG
Trigger: CCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCG...GAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACCTTTTTCTCTCGATCTaGAAGGGCCACTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHLFLSI*KGHFGS
Trigger: GCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAAG...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATGAAAGTCCGGACAGGTaGTCTCTGGTCAGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: RVESSPFCLLKPVARYPHESPDR*SLVRLP
Trigger: CGGGAGCCTGACCAGAGACAACCTGTCCGGACTTTC...ATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp ACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACCTCTCTCTGTTGCTGTaGGCCACAGCTGCCGGCACA +
Preference number: 5 (lower is better)
Translates to: TCTVSTGLGPSITRAFPHLSLLL*ATAAGT
Trigger: TGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAG...GTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATTGCACGAACACCACCTaGGTGTTGACCCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: RVESSPFCLLKPVARYPHCTNTT*VLTPPR
Trigger: CCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCA...ATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACTGCGAGGTGGAAAATaGCATGAAGACCCTGCAACG +
Preference number: 5 (lower is better)
Translates to: RAAGVSEAATSPPGPALQLRGGK*HEDPAT
Trigger: CGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAAGCCTGCGCATGTGTTaGTGGTGCGTACATGTGCAT +
Preference number: 5 (lower is better)
Translates to: RAAGVSEAATSPPGPALQSLRMC*WCVHVH
Trigger: ATGCACATGTACGCACCACAAACACATGCGCAGGCT...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS GCA 90 bp CGTGGCCCACCCCACATGGGAGGAGGGATCCACGTGCACCCAGCGTaGGGCAGAACAGCACTAATGGGTTCTAGAAAGCTTTCTCTTATT +
Preference number: 5 (lower is better)
Translates to: RGPPHMGGGIHVHPA*GRTALMGSRKLSLI
Trigger: AATAAGAGAAAGCTTTCTAGAACCCATTAGTGCTGTTCTGCCGCACGCTGGGTGCACGTGGATCCCTCCTCCCATGTGGGGTGGGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS-3UTR CAA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGACGAGACGATCCTGTaGTCTGGGTATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGADETIL*SGYLCG
Trigger: CCCACAGAGATACCCAGACAACAGGATCGTCTCGTC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp TCCCACACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGTCGCAGCTTTCGACTTaGTTTCCGAACGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SHTGPRAAVTWDGTAVVMSQLST*FPNELA
Trigger: GGCAAGCTCGTTCGGAAACAAAGTCGAAAGCTGCGA...CATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR CAA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGAGGGAGGACCTGCCCGTaGCAGATGACGTGGGGCACG +
Preference number: 5 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRGRTCP*QMTWGT
Trigger: CGTGCCCCACGTCATCTGCAACGGGCAGGTCCTCCC...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCTTTTTCTCTCGATCTaGAAGGGCCACTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSLFLSI*KGHFGS
Trigger: GCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAAG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTTGCTCCTCGATCCTCTaGGTGGTCAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RSARWLLEGTARVLPSYSCSSIL*VVSSSS
Trigger: GCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGCA...AGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACCGGATTGGAGGGTTGTaGAGTAAAGGACGCACCACC +
Preference number: 5 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHRIGGL*SKGRTT
Trigger: GGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCG...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAAACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQTGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCCAGGAGCTTGCACGTTaGTGGTGGGTACATGTACAT +
Preference number: 5 (lower is better)
Translates to: PRDRVESSPFCLLKPVARQELAR*WWVHVH
Trigger: ATGTACATGTACCCACCACAAACGTGCAAGCTCCTG...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGTGTAGGAGCTCACACTaGTGTACACGTTTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLCRSSH*CTRLCA
Trigger: TGCACACAAACGTGTACACAAGTGTGAGCTCCTACA...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCAAGCCTGTAGGAGCTaGTACATGTGTGCTTACCTG +
Preference number: 5 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAQACRS*YMCAYL
Trigger: CAGGTAAGCACACATGTACAAGCTCCTACAGGCTTG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAACAGACACAGGCTGGGTaGACTGGGGCTTTAGGCGGC +
Preference number: 5 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQQTQAG*TGALGG
Trigger: GCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTG...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAGACGGTGTGGCCTGCTaGTTCGCCCTGTCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRDGVAC*FALSAQ
Trigger: CTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTC...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCAGGACTTCTGCCAGGTGGCTATaGGAAGGAACTGCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: DSLGSQRGRRLYPSSLRTSARWL*EGTARV
Trigger: CACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGA...AGTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS TCA 90 bp CGTAATGCGTTTTATGGCTGGATTCTCCATCCAAGCTGGCGGTGGTaGCGTGGCACGTCCCATCTCCCCGGTTGCTGGAAAGGAAGATCA +
Preference number: 5 (lower is better)
Translates to: RNAFYGWILHPSWRW*RGTSHLPGCWKGRS
Trigger: TGATCTTCCTTTCCAGCAACCGGGGAGATGGGACGTGCCACGTCACCACCGCCAGCTTGGATGGAGAATCCAGCCATAAAACGCATTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS CCA 90 bp ACAGTTGCTGCTCCTCGGAGATCAATGACCTCTTGTGGCATCAAGTaGCTCAGACAAGGGTCGTGCCACCCTGTGCGTGACCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: TVAAPRRSMTSCGIK*LRQGSCHPVRDLLL
Trigger: TAGCAACAGGTCACGCACAGGGTGGCACGACCCTTGTCTGAGCCACTTGATGCCACAAGAGGTCATTGATCTCCGAGGAGCAGCAACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS-3UTR CAA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTTCCAAAATGTGTACTaGGACGAGACGATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: QGLPITAALGLLTHPEQRFQNVY*DETILL
Trigger: CAACAGGATCGTCTCGTCCAAGTACACATTTTGGAA...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCAGGACTTCGCAGCTTTCGACTTaGTTTCCGAACGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: DSLGSQRGRRLYPSSLRTSQLST*FPNELA
Trigger: GGCAAGCTCGTTCGGAAACAAAGTCGAAAGCTGCGA...AGTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCAAGTCCGTGAATGCCTaGAGGAACAGATTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGIKSVNA*RNRFLC
Trigger: GCAGAGGAATCTGTTCCTCAAGGCATTCACGGACTT...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTTCGATGCAGCACTCCTaGAACTCCATGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: PALAPAKSTFSRNSGLTASMQHS*NSMLFS
Trigger: GGAAAACAACATGGAGTTCAAGGAGTGCTGCATCGA...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCGCGCTCCCTCCCGTaGACGCTGGGGGACGAGTCA +
Preference number: 5 (lower is better)
Translates to: PERQQFQRLKSESHTEMSSRSLP*TLGDES
Trigger: TGACTCGTCCCCCAGCGTCAACGGGAGGGAGCGCGA...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp AAAGTGCAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCTCGCGCTCCCTCCCGTaGACGCTGGGGGACGAGTCA +
Preference number: 5 (lower is better)
Translates to: KVQTGSTQMFQMQHKPSSSRSLP*TLGDES
Trigger: TGACTCGTCCCCCAGCGTCAACGGGAGGGAGCGCGA...GCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTGCACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATGCTCCTCGATCCTCTaGGTGGTCAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QRWWCFPERQQFQRLKSECSSIL*VVSSSS
Trigger: GCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGCA...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACGCACACACCATTGTTaGCGGGGGCAGCGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRRTHHC*RGQRGQ
Trigger: CTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTAAAACGCACACACCATaGTTTGCGGGGGCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSKTHTP*FAGAAW
Trigger: CCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTT...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACATTTATCTCGTGCCCCTaGTCTATTTCAAATCATCAG +
Preference number: 5 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETFISCP*SISNHQ
Trigger: CTGATGATTTGAAATAGACAAGGGGCACGAGATAAA...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATTTATCTCGTGCCCCTaGTCTATTTCAAATCATCAG +
Preference number: 5 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPFISCP*SISNHQ
Trigger: CTGATGATTTGAAATAGACAAGGGGCACGAGATAAA...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp TTGCATAGTCGCTGTTCCTGGCAGCCTGGCGGCCTTCCTTGCCGATaGCACCTAGAAGACGGAGGTGAAGGAGCTGAAGAAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LHSRCSWQPGGLPCR*HLEDGGEGAEEMLS
Trigger: AGAAAGCATTTCTTCAGCTCCTTCACCTCCGTCTTCTAGGTGTCATCGGCAAGGAAGGCCGCCAGGCTGCCAGGAACAGCGACTATGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 90 bp TGGTGGCGTGAAGTCCGCCGATATCCTCCTCTGTGTGGAAGCCTTTaGTGTCCTGGACCGCGTAATGCGTTTTATGGCTGGATTCTCCAT +
Preference number: 5 (lower is better)
Translates to: WWREVRRYPPLCGSL*CPGPRNAFYGWILH
Trigger: ATGGAGAATCCAGCCATAAAACGCATTACGCGGTCCAGGACACCAAAGGCTTCCACACAGAGGAGGATATCGGCGGACTTCACGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS CCA 90 bp GTTCGGAGCCCCTCCACTGCGTTACGCTCCACTCTGGCTCGGATCTaGTCAACTTTGCCTTCTATCACTCGGGGGAATATCGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: VRSPSTALRSTLARI*STLPSITRGNIEES
Trigger: AGATTCTTCGATATTCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGAGGGGCTCCGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS CCA 90 bp CTGCCTAGTTACTCTCTCTGCTCTCAGGAGAGGCTGTTTGGAGGATaGTACCTGTACAGGGTCGGGTCTCTCTTGAGCACGTCAATGCCA +
Preference number: 5 (lower is better)
Translates to: LPSYSLCSQERLFGG*YLYRVGSLLSTSMP
Trigger: TGGCATTGACGTGCTCAAGAGAGACCCGACCCTGTACAGGTACCATCCTCCAAACAGCCTCTCCTGAGAGCAGAGAGAGTAACTAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418678.5
ENST00000459908.5
CDS-3UTR CAA 90 bp AGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGACGAGACGATCCTGTaGTCTGGGTATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RISADAECFWPSTEVCQVDETIL*SGYLCG
Trigger: CCCACAGAGATACCCAGACAACAGGATCGTCTCGTC...CACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTGCCTTCATATTCTTCTaGGATCAGCCTTTTATAAGC +
Preference number: 5 (lower is better)
Translates to: PVCHPRQPETGSGARTPPAFIFF*DQPFIS
Trigger: GCTTATAAAAGGCTGATCCAAGAAGAATATGAAGGC...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTCTTTTTCTCTCGATCTaGAAGGGCCACTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSLFLSI*KGHFGS
Trigger: GCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAAG...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTGCCTGGCGGCCTTCCTaGCCGATGACACCTATGCCC +
Preference number: 5 (lower is better)
Translates to: PERQQFQRLKSESHTEMSAWRPS*PMTPMP
Trigger: GGGCATAGGTGTCATCGGCAAGGAAGGCCGCCAGGC...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTAGGGTCGGGTCTCTCTaGAGCACGTCAATGCCAACA +
Preference number: 5 (lower is better)
Translates to: RSARWLLEGTARVLPSYSRVGSL*STSMPT
Trigger: TGTTGGCATTGACGTGCTCAAGAGAGACCCGACCCT...AGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTATATCTGCCCGTTGCTaGTCACAGTTGTATTTTCAA +
Preference number: 5 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGISARC*SQLYFQ
Trigger: TTGAAAATACAACTGTGACAAGCAACGGGCAGATAT...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTATATCTGCCCGTTGCTaGTCACAGTTGTATTTTCAA +
Preference number: 5 (lower is better)
Translates to: PVCHPRQPETGSGARTPPISARC*SQLYFQ
Trigger: TTGAAAATACAACTGTGACAAGCAACGGGCAGATAT...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 5 (lower is better)
Translates to: RVESSPFCLLKPVARYPHIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...ATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGGAAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCCAAGCCTGTAGGAGCTaGTACATGTGTGCTTACCTG +
Preference number: 5 (lower is better)
Translates to: RKRHVHSLHRLRTIHHTSQACRS*YMCAYL
Trigger: CAGGTAAGCACACATGTACAAGCTCCTACAGGCTTG...GCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGACAGTGTGCACTTGTTaGTGGCACATGTGTGTATAT +
Preference number: 5 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLTVCTC*WHMCVY
Trigger: ATATACACACATGTGCCACAAACAAGTGCACACTGT...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTAGGGGAGGTTTCAGCTaGCGAGGCTGGACCTCCCTA +
Preference number: 5 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVRGGFS*RGWTSL
Trigger: TAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCT...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp ACAAAGGGACAAGCCACATCCCAGGAAGGAGACAGCAGGACGGCGTaGGACTTCATCACGCTGCTCGGAATGGCATGCAATTTAAACCTG +
Preference number: 5 (lower is better)
Translates to: TKGQATSQEGDSRTA*DFITLLGMACNLNL
Trigger: CAGGTTTAAATTGCATGCCATTCCGAGCAGCGTGATGAAGTCTCACGCCGTCCTGCTGTCTCCTTCCTGGGATGTGGCTTGTCCCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS GCA 90 bp CCTCCACTGCGTTACGCTCCACTCTGGCTCGGATCTGGTCAACTTTaGCTTCTATCACTCGGGGGAATATCGAAGAATCTGCTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: PPLRYAPLWLGSGQL*LLSLGGISKNLLLC
Trigger: GCAAAGGAGCAGATTCTTCGATATTCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS GCA 90 bp TGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTCTaGTCTCAGGAGAGGCTGTTTGGAGGATGGTACCTGTACAGGGTC +
Preference number: 5 (lower is better)
Translates to: WLLEGTARVLPSYSL*SQERLFGGWYLYRV
Trigger: GACCCTGTACAGGTACCATCCTCCAAACAGCCTCTCCTGAGAGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418678.5
ENST00000459908.5
CDS GCA 90 bp CAGCCACTGCGTTACGCTCCACTCTGGCTCGGATCTGGTCAACTTTaGCTTCTATCACTCGGGGGAATATCGAAGAATCTGCTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: QPLRYAPLWLGSGQL*LLSLGGISKNLLLC
Trigger: GCAAAGGAGCAGATTCTTCGATATTCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489577.1
CDS-3UTR CAA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGACGGATCTGGTCAACTTaGCCTTCTATCACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRRIWST*PSITRG
Trigger: CCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCG...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCGTGAGAACCCAGACTTaGATCCCGGCCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LRTVRKHRKVQTGSTQMFVRTQT*IPAFCR
Trigger: CCTGCAGAAGGCCGGGATCAAAGTCTGGGTTCTCAC...GAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTTGGCGCAGGACCGTCTaGCTCAGCTCGAACAGGACG +
Preference number: 5 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTWRRTV*LSSNRT
Trigger: CGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCA...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTCGCAGCAGGGCATTCTaGGCGACGTCCCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: TYRESAPATGVTFMPILGRSRAF*ATSLYR
Trigger: CCTGTACAGGGACGTCGCCAAGAATGCCCTGCTGCG...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGAAAACGCACACACCATaGTTTGCGGGGGCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGKTHTP*FAGAAW
Trigger: CCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTT...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CTGCTCGACAGAAAGGCACTGGCTCTTAGTCTGGACTCTCTCTGTTGCTGTTGGAGCCTGCGCATGTGTTaGTGGTGCGTACATGTGCAT +
Preference number: 5 (lower is better)
Translates to: LLDRKALALSLDSLCCCWSLRMC*WCVHVH
Trigger: ATGCACATGTACGCACCACAAACACATGCGCAGGCT...CCAACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTGCCTTTCTGTCGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR CAA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCACAGTGTGCACTTGTTaGTGGCACATGTGTGTATAT +
Preference number: 5 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFTVCTC*WHMCVY
Trigger: ATATACACACATGTGCCACAAACAAGTGCACACTGT...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp TCTTGTGATCTGTCAACCTCATCACCAAGACAGCTACAGAGTGACTaGGGGGCAGGTAGTGTACACACAGCATCGGCACACCGGACAAAG +
Preference number: 5 (lower is better)
Translates to: SCDLSTSSPRQLQSD*GAGSVHTASAHRTK
Trigger: CTTTGTCCGGTGTGCCGATGCTGTGTGTACACTACCTGCCCCTCAGTCACTCTGTAGCTGTCTTGGTGATGAGGTTGACAGATCACAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 90 bp TATAAAGTTCCAAAATGTGTACTTGGACGAGACGATCCTGTTGTCTaGGTATCTCTGTGGGATGTAGGCCTCTGCGCCCGGAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: YKVPKCVLGRDDPVV*VSLWDVGLCARRWL
Trigger: GAGCCACCTCCGGGCGCAGAGGCCTACATCCCACAGAGATACCCAGACAACAGGATCGTCTCGTCCAAGTACACATTTTGGAACTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000466946.5
ENST00000487903.5
CDS CCA 90 bp CTTTCTCCTGCAGCCACTGCGTTACGCTCCACTCTGGCTCGGATCTaGTCAACTTTGCCTTCTATCACTCGGGGGAATATCGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: LSPAATALRSTLARI*STLPSITRGNIEES
Trigger: AGATTCTTCGATATTCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGCTGCAGGAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489577.1
CDS-3UTR CAA 90 bp ACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACCACTGGTTCATGGCATaGTCTGCTTTATGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: TCTVSTGLGPSITRAFPHHWFMA*SALCRS
Trigger: GCTTCGACATAAAGCAGACAATGCCATGAACCAGTG...GTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR CAA 90 bp CAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGAAGTCCGTGAATGCCTaGAGGAACAGATTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: QEYQQMPNASGPQLRSARKSVNA*RNRFLC
Trigger: GCAGAGGAATCTGTTCCTCAAGGCATTCACGGACTT...CCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTGTCCCAGCTCTTCATaGAGGTCCGACGTGTTCACC +
Preference number: 5 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVCPSSS*RSDVFT
Trigger: GGTGAACACGTCGGACCTCAATGAAGAGCTGGGACA...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp AGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTTTTTCTCTCGATCTaGAAGGGCCACTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: RSARWLLEGTARVLPSYSLFLSI*KGHFGS
Trigger: GCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAAG...AGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTAAAACGCACACACCATaGTTTGCGGGGGCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAKTHTP*FAGAAW
Trigger: CCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTT...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp AATGCCTTGAGGAACAGATTCCTCTGCCTTTCCGACTCCGTTTTCTaGTTATACCACGGCTCATCCCGAAAGGGCTCACTCTGCCACATG +
Preference number: 5 (lower is better)
Translates to: NALRNRFLCLSDSVF*LYHGSSRKGSLCHM
Trigger: CATGTGGCAGAGTGAGCCCTTTCGGGATGAGCCGTGGTATAATCAGAAAACGGAGTCGGAAAGGCAGAGGAATCTGTTCCTCAAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCCTTGAACTCCATGTaGTTTTCCGTGAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVSLNSM*FSVRVP
Trigger: CGGCACCCTCACGGAAAACAACATGGAGTTCAAGGA...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp CCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTCTGCTTCGATGCAGCACTCCTaGAACTCCATGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: PGGYWKELPECCLVTLSASMQHS*NSMLFS
Trigger: GGAAAACAACATGGAGTTCAAGGAGTGCTGCATCGA...AGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTGCCTTCATATTCTTCTaGGATCAGCCTTTTATAAGC +
Preference number: 5 (lower is better)
Translates to: QPSICLPALAPAKSTFSRAFIFF*DQPFIS
Trigger: GCTTATAAAAGGCTGATCCAAGAAGAATATGAAGGC...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGGCCTTCATATTCTTCTaGGATCAGCCTTTTATAAGC +
Preference number: 5 (lower is better)
Translates to: HRLRTIHHTSIPTRDLGQAFIFF*DQPFIS
Trigger: GCTTATAAAAGGCTGATCCAAGAAGAATATGAAGGC...CTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 5 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTTTTATCTCGTGCCCCTaGTCTATTTCAAATCATCAG +
Preference number: 5 (lower is better)
Translates to: QPSICLPALAPAKSTFSRFISCP*SISNHQ
Trigger: CTGATGATTTGAAATAGACAAGGGGCACGAGATAAA...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTACATGTGTGCAGGAGCTaGCACGTTTGTGGTGGGTAC +
Preference number: 5 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLHVCRS*HVCGGY
Trigger: GTACCCACCACAAACGTGCAAGCTCCTGCACACATG...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCTGTCTAAACATTaGTTTAAACGCTCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHSLSKH*FKRSAS
Trigger: GCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCT...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp GGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGAAGCTGGTGCCCTCATTaGTCTGAGAGGGTTATTTTG +
Preference number: 5 (lower is better)
Translates to: GVRFPQEHGRVRRLEFDGSWCPH*SERVIL
Trigger: CAAAATAACCCTCTCAGACAAATGAGGGCACCAGCT...TCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR CAA 90 bp AGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGTGTTTATCAGGGCTTaGCTGATCAGAATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: RISADAECFWPSTEVCQVVFIRA*LIRMQR
Trigger: TCTCTGCATTCTGATCAGCAAAGCCCTGATAAACAC...CACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTCGGATCTGGTCAACTTaGCCTTCTATCACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: PERQQFQRLKSESHTEMSRIWST*PSITRG
Trigger: CCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCG...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TGGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGCCTTCATATTCTTCTaGGATCAGCCTTTTATAAGC +
Preference number: 5 (lower is better)
Translates to: WPSTEVCQVAIGRNCQSAAFIFF*DQPFIS
Trigger: GCTTATAAAAGGCTGATCCAAGAAGAATATGAAGGC...AGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACATATCTGCCCGTTGCTaGTCACAGTTGTATTTTCAA +
Preference number: 5 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHISARC*SQLYFQ
Trigger: TTGAAAATACAACTGTGACAAGCAACGGGCAGATAT...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGCTCTCTCTGTTGCTGTaGGCCACAGCTGCCGGCACA +
Preference number: 5 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRLSLLL*ATAAGT
Trigger: TGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAG...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAG +
Preference number: 5 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRNTTLV*TPPRGQ
Trigger: CTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACGCACACACCATTGTTaGCGGGGGCAGCGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: CLKCAVQLITATRNTKKRRTHHC*RGQRGQ
Trigger: CTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCGCATTCATCAGAGATaGGAACATTCAGTCAAAACT +
Preference number: 5 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGARIHQR*EHSVKT
Trigger: AGTTTTGACTGAATGTTCCAATCTCTGATGAATGCG...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS TCA 90 bp CACCCATTCTGCTTGTTCCATCAGAAACTCAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTTGACTGCTCGACAGAAAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: HPFCLFHQKLRLLEV*ESIKMVDCSTERHW
Trigger: CCAGTGCCTTTCTGTCGAGCAGTCAACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGATGGAACAAGCAGAATGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS TCA 90 bp AGGAGCATCACCTTGTTCCATCAGAAACTCAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTTGACTGCTCGACAGAAAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: RSITLFHQKLRLLEV*ESIKMVDCSTERHW
Trigger: CCAGTGCCTTTCTGTCGAGCAGTCAACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGATGGAACAAGGTGATGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS-3UTR CAA 90 bp CAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCACACTGGTTCATGGCATaGTCTGCTTTATGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: QDCQKAQESANWLHTDVPHWFMA*SALCRS
Trigger: GCTTCGACATAAAGCAGACAATGCCATGAACCAGTG...TGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCGTGTTTATCAGGGCTTaGCTGATCAGAATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRVFIRA*LIRMQR
Trigger: TCTCTGCATTCTGATCAGCAAAGCCCTGATAAACAC...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CAA 90 bp TCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAGAAAGTCCGGACAGGTaGTCTCTGGTCAGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: SPFELCCFQFKQAPDQARESPDR*SLVRLP
Trigger: CGGGAGCCTGACCAGAGACAACCTGTCCGGACTTTC...TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp GCCACTGCATCTGGAAGGGTCATACATCTGACTGGTCATCACCCACTAATCACATGGTACCCTGCTAGATaGTTTAACAATCTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ATASGRVIHLTGHHPLITWYPAR*FNNLRR
Trigger: CCGCCTCAGATTGTTAAACAATCTAGCAGGGTACCA...TGTGATTAGTGGGTGATGACCAGTCAGATGTATGACCCTTCCAGATGCAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS TCA 90 bp CTCGCAGCTTTCGACTTTGTTTCCGAACGAGCTTGCCGTGCTGAATaGAATGAACAGGACACTGGTTCATGGCATTGTCTGCTTTATGTC +
Preference number: 5 (lower is better)
Translates to: LAAFDFVSERACRAE*NEQDTGSWHCLLYV
Trigger: GACATAAAGCAGACAATGCCATGAACCAGTGTCCTGTTCATTTCATTCAGCACGGCAAGCTCGTTCGGAAACAAAGTCGAAAGCTGCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS-3UTR CAA 90 bp TTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATGCTTCTGGCTCCTTGAACTCCATGTaGTTTTCCGTGAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: LNKLLIKQEYQQMPNASGSLNSM*FSVRVP
Trigger: CGGCACCCTCACGGAAAACAACATGGAGTTCAAGGA...GCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGCGGATCTGGTCAACTTaGCCTTCTATCACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRRIWST*PSITRG
Trigger: CCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCG...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTATGCTCCTCGATCCTCTaGGTGGTCAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLCSSIL*VVSSSS
Trigger: GCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGCA...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTCATGAGCTGAGTGGTTaGAAGAACAAGGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PERQQFQRLKSESHTEMSHELSG*KNKAGG
Trigger: ACCTCCAGCCTTGTTCTTCAAACCACTCAGCTCATG...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS GCA 90 bp GCCGTGCTGAATGAAATGAACAGGACACTGGTTCATGGCATTGTCTaGTTTATGTCGAAGCCAGTCTTCATAACCCTGTTTGATAGCCGT +
Preference number: 5 (lower is better)
Translates to: AVLNEMNRTLVHGIV*FMSKPVFITLFDSR
Trigger: ACGGCTATCAAACAGGGTTATGAAGACTGGCTTCGACATAAAGCAGACAATGCCATGAACCAGTGTCCTGTTCATTTCATTCAGCACGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000466946.5
ENST00000487903.5
CDS-3UTR CAA 90 bp GAATCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCATGTCCCAGCTCTTCATaGAGGTCCGACGTGTTCACC +
Preference number: 5 (lower is better)
Translates to: ESPFELCCFQFKQAPDQACPSSS*RSDVFT
Trigger: GGTGAACACGTCGGACCTCAATGAAGAGCTGGGACA...TGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTGTAGGAGCTCACACTaGTGTACACGTTTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: PERQQFQRLKSESHTEMSCRSSH*CTRLCA
Trigger: TGCACACAAACGTGTACACAAGTGTGAGCTCCTACA...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGAGCCTGTCTAAACATTaGTTTAAACGCTCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGSLSKH*FKRSAS
Trigger: GCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCT...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS CCA 90 bp CATAGGCTTCTGCTAACTTTTTCTCTCGATCTTGAAGGGCCACTTTaGCAGCCTGCAGCAGCTTACAAATGCCTTCATATTCTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: HRLLLTFSLDLEGPL*QPAAAYKCLHILLG
Trigger: TCCAAGAAGAATATGAAGGCATTTGTAAGCTGCTGCAGGCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAAGTTAGCAGAAGCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACTTCCAAAATGTGTACTaGGACGAGACGATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: STGKCKLAPHRCSKCSINFQNVY*DETILL
Trigger: CAACAGGATCGTCTCGTCCAAGTACACATTTTGGAA...GTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp TCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGACTCAGGAGAGGCTGTTaGGAGGATGGTACCTGTACA +
Preference number: 5 (lower is better)
Translates to: SPFELCCFQFKQAPDQARLRRGC*EDGTCT
Trigger: TGTACAGGTACCATCCTCCAAACAGCCTCTCCTGAG...TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
CDS-3UTR CAA 90 bp CCTGGCCACTGCATCTGGAAGGGTCATACATCTGACTGGTCATCACCCACTAATTCTGAGAGGGTTATTTaGAGACTAAATGCATTCGTA +
Preference number: 5 (lower is better)
Translates to: PGHCIWKGHTSDWSSPTNSERVI*RLNAFV
Trigger: TACGAATGCATTTAGTCTCAAAATAACCCTCTCAGA...ATTAGTGGGTGATGACCAGTCAGATGTATGACCCTTCCAGATGCAGTGGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR CAA 90 bp CTGCAGCCTTTTCGGCAAATTATTCCCATTTGTAAAGCTGGTGCCCTCATTTGTGATGGACAAGACAAGTaGAATCCTCGTGGCATTTCC +
Preference number: 5 (lower is better)
Translates to: LQPFRQIIPICKAGALICDGQDK*NPRGIS
Trigger: GGAAATGCCACGAGGATTCAACTTGTCTTGTCCATC...ACAAATGAGGGCACCAGCTTTACAAATGGGAATAATTTGCCGAAAAGGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS TCA 90 bp TCTAGAAAGCTTTCTCTTATTTCAGGGGCAACTGAAATGCACATGTaGCCACGTTTTGGCCACTCAGGACAGACAACGTATAGAGGAAAT +
Preference number: 5 (lower is better)
Translates to: SRKLSLISGATEMHM*PRFGHSGQTTYRGN
Trigger: ATTTCCTCTATACGTTGTCTGTCCTGAGTGGCCAAAACGTGGTCACATGTGCATTTCAGTTGCCCCTGAAATAAGAGAAAGCTTTCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS-3UTR CAA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTACAGGACAGTGTGCACTaGTTTGTGGCACATGTGTGT +
Preference number: 5 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLQDSVH*FVAHVC
Trigger: ACACACATGTGCCACAAACAAGTGCACACTGTCCTG...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CAA 90 bp AAAGTCAGAACTTTTCTAGGCTTCCTGATACCAGAAAGACATCCATGTTTACAAAAGGTTTTCAGTGTTTaGGACGCCCTGACCACCAGC +
Preference number: 5 (lower is better)
Translates to: KVRTFLGFLIPERHPCLQKVFSV*DALTTS
Trigger: GCTGGTGGTCAGGGCGTCCAAAACACTGAAAACCTT...TTGTAAACATGGATGTCTTTCTGGTATCAGGAAGCCTAGAAAAGTTCTGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR CAA 90 bp GACAAGCAAAACAAGATCTGCGTTTTAAATCTCTATCACGGTTGCTTCTATTTTGGCCGCGTGAGACGTTaGGAGTTTGATGGACAAGAC +
Preference number: 5 (lower is better)
Translates to: DKQNKICVLNLYHGCFYFGRVRR*EFDGQD
Trigger: GTCTTGTCCATCAAACTCCAAACGTCTCACGCGGCC...AAAATAGAAGCAACCGTGATAGAGATTTAAAACGCAGATCTTGTTTTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS-3UTR CAA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATCATGAGCTGAGTGGTTaGAAGAACAAGGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNHELSG*KNKAGG
Trigger: ACCTCCAGCCTTGTTCTTCAAACCACTCAGCTCATG...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS GCA 90 bp CAAGAAGGCAATGCAGGTATCAGTATAAACGGGAAAGAATCGAACTaGACAGTGAATAAGGAATCCTTCCTCAAACATTTCCACCTGAAA +
Preference number: 5 (lower is better)
Translates to: QEGNAGISINGKESN*TVNKESFLKHFHLK
Trigger: TTTCAGGTGGAAATGTTTGAGGAAGGATTCCTTATTCACTGTGCAGTTCGATTCTTTCCCGTTTATACTGATACCTGCATTGCCTTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS GCA 90 bp ACGTATAGAGGAAATTTGTCAGCTCCAAGAGAAACAAGAAGGCAATaGAGGTATCAGTATAAACGGGAAAGAATCGAACTGCACAGTGAA +
Preference number: 5 (lower is better)
Translates to: TYRGNLSAPRETRRQ*RYQYKRERIELHSE
Trigger: TTCACTGTGCAGTTCGATTCTTTCCCGTTTATACTGATACCTGCATTGCCTTCTTGTTTCTCTTGGAGCTGACAAATTTCCTCTATACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 72 bp GCGCCTTCTCTCTCCCCGTCGGTCCGCCCGCTCGGTTaGGCTCGGCTGGAGCACCCCGGCCGCGGCGGAGCC +
Preference number: 6 (lower is better)
Translates to: APSLSPSVRPLG*ARLEHPGRGGA
Trigger: GGCTCCGCCGCGGCCGGGGTGCTCCAGCCGAGCCCAACCGAGCGGGCGGACCGACGGGGAGAGAGAAGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375645.8
CDS CCA 72 bp GGCAAGGCTGCTGCTCGGGGCCGCGCGCGCGCGCTCTaGCGCCTTCTCTCTCCCCGTCGGTCCGCCCGCTCG +
Preference number: 6 (lower is better)
Translates to: GKAAARGRARAL*RLLSPRRSARS
Trigger: CGAGCGGGCGGACCGACGGGGAGAGAGAAGGCGCCAGAGCGCGCGCGCGCGGCCCCGAGCAGCAGCCTTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375645.8
CDS CAA 72 bp GGCGCCTTCTCTCTCCCCGTCGGTCCGCCCGCTCGGTaGGGCTCGGCTGGAGCACCCCGGCCGCGGCGGAGC +
Preference number: 6 (lower is better)
Translates to: GAFSLPVGPPAR*GSAGAPRPRRS
Trigger: GCTCCGCCGCGGCCGGGGTGCTCCAGCCGAGCCCAACCGAGCGGGCGGACCGACGGGGAGAGAGAAGGCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375645.8
CDS CAA 90 bp GCGCGCTCTGGCGCCTTCTCTCTCCCCGTCGGTCCGCCCGCTCGGTaGGGCTCGGCTGGAGCACCCCGGCCGCGGCGGAGCCTGCGCTCT +
Preference number: 6 (lower is better)
Translates to: ARSGAFSLPVGPPAR*GSAGAPRPRRSLRS
Trigger: AGAGCGCAGGCTCCGCCGCGGCCGGGGTGCTCCAGCCGAGCCCAACCGAGCGGGCGGACCGACGGGGAGAGAGAAGGCGCCAGAGCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375645.8
CDS GCA 72 bp GCGCGTCGGCAGCTGCTCCACTGGCGGCAAGGCTGCTaGTCGGGGCCGCGCGCGCGCGCTCTGGCGCCTTCT +
Preference number: 6 (lower is better)
Translates to: ARRQLLHWRQGC*SGPRARALAPS
Trigger: AGAAGGCGCCAGAGCGCGCGCGCGCGGCCCCGAGCAGCAGCCTTGCCGCCAGTGGAGCAGCTGCCGACGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375645.8
CDS CCA 72 bp AGGCAGCCGCCACCTACCGACGTGGCCCACCCCACATaGGAGGAGGGATCCACGTGCACCCAGCGTGCGGCA +
Preference number: 6 (lower is better)
Translates to: RQPPPTDVAHPT*EEGSTCTQRAA
Trigger: TGCCGCACGCTGGGTGCACGTGGATCCCTCCTCCCATGTGGGGTGGGCCACGTCGGTAGGTGGCGGCTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 72 bp GACGGGACAGAGGGAGGCAGCCGCCACCTACCGACGTaGCCCACCCCACATGGGAGGAGGGATCCACGTGCA +
Preference number: 6 (lower is better)
Translates to: DGTEGGSRHLPT*PTPHGRRDPRA
Trigger: TGCACGTGGATCCCTCCTCCCATGTGGGGTGGGCCACGTCGGTAGGTGGCGGCTGCCTCCCTCTGTCCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 72 bp GGGACTTCCCGACGTGAGGCTGCTGTACCCAGCGCCTaGTGGACGCTGCGTCAGAGCACGTGGACTCAGGGC +
Preference number: 6 (lower is better)
Translates to: GTSRREAAVPSA*WTLRQSTWTQG
Trigger: GCCCTGAGTCCACGTGCTCTGACGCAGCGTCCACCAGGCGCTGGGTACAGCAGCCTCACGTCGGGAAGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS GCA 72 bp GCCGCCGTAGGAGGTCCTTCAGGAGGGGCCCATCGCTaGTCTGTGCGGCCTGGACTGGAGCCTTGTGCTTCA +
Preference number: 6 (lower is better)
Translates to: AAVGGPSGGAHR*SVRPGLEPCAS
Trigger: TGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTGAAGGACCTCCTACGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415301.2
ENST00000479193.1
CDS CCA 72 bp CAGGAGGGGCCCATCGCTGCTCTGTGCGGCCTGGACTaGAGCCTTGTGCTTCACACCCCTCTGCAAGGCGAG +
Preference number: 6 (lower is better)
Translates to: QEGPIAALCGLD*SLVLHTPLQGE
Trigger: CTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS TCA 72 bp GACGCTGCGTCAGAGCACGTGGACTCAGGGCTCTGGTaGTGGGCATGGCCCTGCTGCCCCGTGTCTACCATC +
Preference number: 6 (lower is better)
Translates to: DAASEHVDSGLW*WAWPCCPVSTI
Trigger: GATGGTAGACACGGGGCAGCAGGGCCATGCCCATCACCAGAGCCCTGAGTCCACGTGCTCTGACGCAGCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS GCA 72 bp TCAGCTCCAGCAGCTGCGTGTTCCTGCGGAAGAGCTTaGAGGCGTAGCACGTGGCCGCGGCCGTCTCCATCT +
Preference number: 6 (lower is better)
Translates to: SAPAAACSCGRA*RRSTWPRPSPS
Trigger: AGATGGAGACGGCCGCGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 72 bp TCCTCTTGGTGGTCAGCTCCAGCAGCTGCGTGTTCCTaGGGAAGAGCTTGCAGGCGTAGCACGTGGCCGCGG +
Preference number: 6 (lower is better)
Translates to: SSWWSAPAAACS*GRACRRSTWPR
Trigger: CCGCGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGACCACCAAGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 72 bp CTCTGGTCAGGCTCCCGCTGTGGCGCAGGACCGTCTTaGTCAGCTCGAACAGGACGTCGTGCAGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LWSGSRCGAGPS*SARTGRRAGSA
Trigger: AGCAGAGCCTGCACGACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGACCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 72 bp TCTGCAAGGGCGCCATGCGGCAGCAGAGCACCGCGCTaGAGCTCCGGCAGATTTCCAGGAAGAGCTCCCTGT +
Preference number: 6 (lower is better)
Translates to: SARAPCGSRAPR*SSGRFPGRAPC
Trigger: ACAGGGAGCTCTTCCTGGAAATCTGCCGGAGCTGCAGCGCGGTGCTCTGCTGCCGCATGGCGCCCTTGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000610419.1
CDS GCA 72 bp GACGTGAGGCTGCTGTACCCAGCGCCTGGTGGACGCTaGGTCAGAGCACGTGGACTCAGGGCTCTGGTGATG +
Preference number: 6 (lower is better)
Translates to: DVRLLYPAPGGR*VRARGLRALVM
Trigger: CATCACCAGAGCCCTGAGTCCACGTGCTCTGACGCAGCGTCCACCAGGCGCTGGGTACAGCAGCCTCACGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS CCA 72 bp CAGGAGGGGCCCATCGCTGCTCTGTGCGGCCTGGACTaGAGCCTTGTGCTTCACACCCCTCTGGACTCTCTC +
Preference number: 6 (lower is better)
Translates to: QEGPIAALCGLD*SLVLHTPLDSL
Trigger: GAGAGAGTCCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415301.2
CDS CCA 72 bp GCAGGAAGAGGCTCGAAGCCCCTGTTGGAGTCTGCATaGGGTGTCATGGAGCTGCCAGGGCGAGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: AGRGSKPLLESA*GVMELPGRGLG
Trigger: CCCAAGCCCTCGCCCTGGCAGCTCCATGACACCCCATGCAGACTCCAACAGGGGCTTCGAGCCTCTTCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS CAA 72 bp TCTCTGGTCAGGCTCCCGCTGTGGCGCAGGACCGTCTaGCTCAGCTCGAACAGGACGTCGTGCAGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SLVRLPLWRRTV*LSSNRTSCRLC
Trigger: GCAGAGCCTGCACGACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGACCAGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS CAA 72 bp TGTCATGGAGCTGCCAGGGCGAGGGCTTGGGGCGTCTaGGGAAAACACTGTCCCAGCAGGGCCGCTCCCATG +
Preference number: 6 (lower is better)
Translates to: CHGAARARAWGV*GKHCPSRAAPM
Trigger: CATGGGAGCGGCCCTGCTGGGACAGTGTTTTCCCAAGACGCCCCAAGCCCTCGCCCTGGCAGCTCCATGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS CAA 90 bp GGTGACGGGGGTGTCCTGAATGCACCTGCGTGCTGCCATGGGCCTTaGTCTAGCGAAGGGGTGACCTGGCCACCAGGATGTGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GDGGVLNAPACCHGP*SSEGVTWPPGCASS
Trigger: GCTGCTGGCACATCCTGGTGGCCAGGTCACCCCTTCGCTAGACAAAGGCCCATGGCAGCACGCAGGTGCATTCAGGACACCCCCGTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS TCA 72 bp CTGCGTGCTGCCATGGGCCTTTGTCTAGCGAAGGGGTaGCCTGGCCACCAGGATGTGCCAGCAGCAAGGACG +
Preference number: 6 (lower is better)
Translates to: LRAAMGLCLAKG*PGHQDVPAART
Trigger: CGTCCTTGCTGCTGGCACATCCTGGTGGCCAGGTCACCCCTTCGCTAGACAAAGGCCCATGGCAGCACGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS TCA 72 bp CAAGTGGCTCAGACAAGGGTCGTGCCACCCTGTGCGTaGCCTGTTGCTAACACCGTGAGGGGGAGCGGCGAC +
Preference number: 6 (lower is better)
Translates to: QVAQTRVVPPCA*PVANTVRGSGD
Trigger: GTCGCCGCTCCCCCTCACGGTGTTAGCAACAGGTCACGCACAGGGTGGCACGACCCTTGTCTGAGCCACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS TCA 72 bp GTGCTTCACACCCCTCTGCAAGGCGAGGAAAGATACTaGGCGACGTGGGCCACACGGGGCCACCAGGAGTGC +
Preference number: 6 (lower is better)
Translates to: VLHTPLQGEERY*ATWATRGHQEC
Trigger: GCACTCCTGGTGGCCCCGTGTGGCCCACGTCGCTCAGTATCTTTCCTCGCCTTGCAGAGGGGTGTGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS CCA 72 bp AGTCCGGACAGGTTGTCTCTGGTCAGGCTCCCGCTGTaGCGCAGGACCGTCTTGCTCAGCTCGAACAGGACG +
Preference number: 6 (lower is better)
Translates to: SPDRLSLVRLPL*RRTVLLSSNRT
Trigger: CGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS CCA 72 bp TCCTTCAGGAGGGGCCCATCGCTGCTCTGTGCGGCCTaGACTGGAGCCTTGTGCTTCACACCCCTCTGGACT +
Preference number: 6 (lower is better)
Translates to: SFRRGPSLLCAA*TGALCFTPLWT
Trigger: AGTCCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415301.2
CDS CCA 72 bp GGCCCTCCTCATCCTCAGGGGTACATTCCCAGACCCTaGGGGGATGCAGAGTCTGCGGATGGTCCTGAACCC +
Preference number: 6 (lower is better)
Translates to: GPPHPQGYIPRP*GDAESADGPEP
Trigger: GGGTTCAGGACCATCCGCAGACTCTGCATCCCCCCAGGGTCTGGGAATGTACCCCTGAGGATGAGGAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 72 bp TCCTTCAGGAGGGGCCCATCGCTGCTCTGTGCGGCCTaGACTGGAGCCTTGTGCTTCACACCCCTCTGCAAG +
Preference number: 6 (lower is better)
Translates to: SFRRGPSLLCAA*TGALCFTPLCK
Trigger: CTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS CAA 90 bp GACAGGTTGTCTCTGGTCAGGCTCCCGCTGTGGCGCAGGACCGTCTaGCTCAGCTCGAACAGGACGTCGTGCAGGCTCTGCTCCTCGATC +
Preference number: 6 (lower is better)
Translates to: DRLSLVRLPLWRRTV*LSSNRTSCRLCSSI
Trigger: GATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGACCAGAGACAACCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS TCA 72 bp AGGTCGGGCTGGGGCTGCTCACACTCGATGGTGGCGTaGAGTCCGCCGATATCCTCCTCTGTGTGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: RSGWGCSHSMVA*SPPISSSVWKP
Trigger: AGGCTTCCACACAGAGGAGGATATCGGCGGACTTCACGCCACCATCGAGTGTGAGCAGCCCCAGCCCGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS TCA 72 bp TCCCGGTCACACACGAGGGTGGTGACGGGGGTGTCCTaGATGCACCTGCGTGCTGCCATGGGCCTTTGTCTA +
Preference number: 6 (lower is better)
Translates to: SRSHTRVVTGVS*MHLRAAMGLCL
Trigger: TAGACAAAGGCCCATGGCAGCACGCAGGTGCATTCAGGACACCCCCGTCACCACCCTCGTGTGTGACCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS GCA 72 bp CGCAGGACCGTCTTGCTCAGCTCGAACAGGACGTCGTaGAGGCTCTGCTCCTCGATCCTCTTGGTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: RRTVLLSSNRTS*RLCSSILLVVS
Trigger: GCTGACCACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 72 bp GCGGCCTGGACTGGAGCCTTGTGCTTCACACCCCTCTaGAAGGCGAGGAAAGATACTGAGCGACGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: AAWTGALCFTPL*KARKDTERRGP
Trigger: TGGCCCACGTCGCTCAGTATCTTTCCTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS GCA 72 bp GGCATGGCCCTGCTGCCCCGTGTCTACCATCCCAGGTaGGTGGAAGGCAGAGGAGCATCACCTTGTTCCATC +
Preference number: 6 (lower is better)
Translates to: GMALLPRVYHPR*VEGRGASPCSI
Trigger: GATGGAACAAGGTGATGCTCCTCTGCCTTCCACGCACCTGGGATGGTAGACACGGGGCAGCAGGGCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS CCA 72 bp GTATCTCTGTGGGATGTAGGCCTCTGCGCCCGGAGGTaGCTCCCTGTGTCCCACGTAGATGGTCCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: VSLWDVGLCARR*LPVSHVDGPAV
Trigger: GACAGCAGGACCATCTACGTGGGACACAGGGAGCCACCTCCGGGCGCAGAGGCCTACATCCCACAGAGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000459908.5
ENST00000466946.5
ENST00000487903.5
CDS CCA 72 bp GGACGTCGTGCAGGCTCTGCTCCTCGATCCTCTTGGTaGTCAGCTCCAGCAGCTGCGTGTTCCTGCGGAAGA +
Preference number: 6 (lower is better)
Translates to: GRRAGSAPRSSW*SAPAAACSCGR
Trigger: TCTTCCGCAGGAACACGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS CAA 72 bp GGCCCATCGCTGCTCTGTGCGGCCTGGACTGGAGCCTaGTGCTTCACACCCCTCTGGACTCTCTCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: GPSLLCAAWTGA*CFTPLWTLSVA
Trigger: AGCAACAGAGAGAGTCCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415301.2
CDS CAA 72 bp GGCCCATCGCTGCTCTGTGCGGCCTGGACTGGAGCCTaGTGCTTCACACCCCTCTGCAAGGCGAGGAAAGAT +
Preference number: 6 (lower is better)
Translates to: GPSLLCAAWTGA*CFTPLCKARKD
Trigger: ATCTTTCCTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS CAA 90 bp TTCAGGAGGGGCCCATCGCTGCTCTGTGCGGCCTGGACTGGAGCCTaGTGCTTCACACCCCTCTGCAAGGCGAGGAAAGATACTGAGCGA +
Preference number: 6 (lower is better)
Translates to: FRRGPSLLCAAWTGA*CFTPLCKARKDTER
Trigger: TCGCTCAGTATCTTTCCTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGGGCCCCTCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS TCA 72 bp TTCCTGACGACTCTGGGAGGACCTGCCCGTTGCAGATaGCGTGGGGCACGTAGACATGGCCTTCGATGCAGC +
Preference number: 6 (lower is better)
Translates to: FLTTLGGPARCR*RGARRHGLRCS
Trigger: GCTGCATCGAAGGCCATGTCTACGTGCCCCACGTCATCTGCAACGGGCAGGTCCTCCCAGAGTCGTCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS TCA 72 bp CCAGTGCGTCAAACAGTCCCAGGAGCGTCCAGTAGATaGACACGCGCCAGCGCAGCAGGGCATTCTTGGCGA +
Preference number: 6 (lower is better)
Translates to: PVRQTVPGASSR*TRASAAGHSWR
Trigger: TCGCCAAGAATGCCCTGCTGCGCTGGCGCGTGTTCATCTACTGGACGCTCCTGGGACTGTTTGACGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000415301.2
ENST00000471555.5
ENST00000487903.5
CDS TCA 72 bp ATCATCATGAGCCTTCCCGGTCACACACGAGGGTGGTaGCGGGGGTGTCCTGAATGCACCTGCGTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: IIMSLPGHTRGW*RGCPECTCVLP
Trigger: TGGCAGCACGCAGGTGCATTCAGGACACCCCCGTCACCACCCTCGTGTGTGACCGGGAAGGCTCATGATGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS GCA 72 bp GTCTTGCTCAGCTCGAACAGGACGTCGTGCAGGCTCTaGTCCTCGATCCTCTTGGTGGTCAGCTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: VLLSSNRTSCRL*SSILLVVSSSS
Trigger: GCTGCTGGAGCTGACCACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGAGCTGAGCAAGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 72 bp CCGGCTGGGGACACTCCGTACCTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCGGCACAGGACTTTCTT +
Preference number: 6 (lower is better)
Translates to: PAGDTPYLDSLC*CWPQLPAQDFL
Trigger: AAGAAAGTCCTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAGGTACGGAGTGTCCCCAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495930.1
CDS CCA 72 bp CTTGGACGAGACGATCCTGTTGTCTGGGTATCTCTGTaGGATGTAGGCCTCTGCGCCCGGAGGTGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: LGRDDPVVWVSL*DVGLCARRWLP
Trigger: AGGGAGCCACCTCCGGGCGCAGAGGCCTACATCCCACAGAGATACCCAGACAACAGGATCGTCTCGTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000466946.5
ENST00000487903.5
CDS CCA 72 bp CCTGCATATCTGCTGAAAGTCCGGACAGGTTGTCTCTaGTCAGGCTCCCGCTGTGGCGCAGGACCGTCTTGC +
Preference number: 6 (lower is better)
Translates to: PAYLLKVRTGCL*SGSRCGAGPSC
Trigger: GCAAGACGGTCCTGCGCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCGGACTTTCAGCAGATATGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
CDS CCA 72 bp TGCTGCCATGGGCCTTTGTCTAGCGAAGGGGTGACCTaGCCACCAGGATGTGCCAGCAGCAAGGACGAAGCT +
Preference number: 6 (lower is better)
Translates to: CCHGPLSSEGVT*PPGCASSKDEA
Trigger: AGCTTCGTCCTTGCTGCTGGCACATCCTGGTGGCCAGGTCACCCCTTCGCTAGACAAAGGCCCATGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 72 bp CACATGGTCAGTCTCAGGGATACCCACGGGGCTGCCTaGGGTGACCTGAGCCACTCTGGGATGCACTCACTA +
Preference number: 6 (lower is better)
Translates to: HMVSLRDTHGAA*GDLSHSGMHSL
Trigger: TAGTGAGTGCATCCCAGAGTGGCTCAGGTCACCCCAGGCAGCCCCGTGGGTATCCCTGAGACTGACCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS CAA 72 bp GGTGTCCTGAATGCACCTGCGTGCTGCCATGGGCCTTaGTCTAGCGAAGGGGTGACCTGGCCACCAGGATGT +
Preference number: 6 (lower is better)
Translates to: GVLNAPACCHGP*SSEGVTWPPGC
Trigger: ACATCCTGGTGGCCAGGTCACCCCTTCGCTAGACAAAGGCCCATGGCAGCACGCAGGTGCATTCAGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS TCA 72 bp CAGGGACGGGGAGAAGAACGGATGAAACCATCATCATaGGCCTTCCCGGTCACACACGAGGGTGGTGACGGG +
Preference number: 6 (lower is better)
Translates to: QGRGEERMKPSS*AFPVTHEGGDG
Trigger: CCCGTCACCACCCTCGTGTGTGACCGGGAAGGCTCATGATGATGGTTTCATCCGTTCTTCTCCCCGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS TCA 72 bp GAGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTGCTaGGAGAACGAGACACATGGTCAGTCTCAGGGATAC +
Preference number: 6 (lower is better)
Translates to: ESRSRGCAHPFC*ENETHGQSQGY
Trigger: GTATCCCTGAGACTGACCATGTGTCTCGTTCTCTCAGCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS GCA 72 bp CCGAGGCTGTGCGCACCCATTCTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCGGCACAGGACTTTCTT +
Preference number: 6 (lower is better)
Translates to: PRLCAPILDSLC*CWPQLPAQDFL
Trigger: AAGAAAGTCCTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAGAATGGGTGCGCACAGCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000419631.1
CDS GCA 72 bp CCATCGCTGCTCTGTGCGGCCTGGACTGGAGCCTTGTaGTTCACACCCCTCTGCAAGGCGAGGAAAGATACT +
Preference number: 6 (lower is better)
Translates to: PSLLCAAWTGAL*FTPLCKARKDT
Trigger: AGTATCTTTCCTCGCCTTGCAGAGGGGTGTGAAGCACAAGGCTCCAGTCCAGGCCGCACAGAGCAGCGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479193.1
CDS CCA 72 bp CCGTCTACGCTGTCATCGTCTTTCACCTGGACGGTGTaGCAGAGACAGAGGGCCCGGAAAAACAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: PSTLSSSFTWTV*QRQRARKNSSS
Trigger: CGAGGAGCTGTTTTTCCGGGCCCTCTGTCTCTGCCACACCGTCCAGGTGAAAGACGATGACAGCGTAGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS CCA 72 bp TTCCTGGGGCCGTCTACGCTGTCATCGTCTTTCACCTaGACGGTGTGGCAGAGACAGAGGGCCCGGAAAAAC +
Preference number: 6 (lower is better)
Translates to: FLGPSTLSSSFT*TVWQRQRARKN
Trigger: GTTTTTCCGGGCCCTCTGTCTCTGCCACACCGTCCAGGTGAAAGACGATGACAGCGTAGACGGCCCCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS CCA 72 bp TGGCCCTGCTGCCCCGTGTCTACCATCCCAGGTGCGTaGAAGGCAGAGGAGCATCACCTTGTTCCATCAGAA +
Preference number: 6 (lower is better)
Translates to: WPCCPVSTIPGA*KAEEHHLVPSE
Trigger: TTCTGATGGAACAAGGTGATGCTCCTCTGCCTTCCACGCACCTGGGATGGTAGACACGGGGCAGCAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS CCA 72 bp GGCAGCGGCGGATGCTGGCAGGAGCAGATGTCTTCATaGCCTCCATGTCTGTTGGAGAGGCGACAAGCTATG +
Preference number: 6 (lower is better)
Translates to: GSGGCWQEQMSS*PPCLLERRQAM
Trigger: CATAGCTTGTCGCCTCTCCAACAGACATGGAGGCCATGAAGACATCTGCTCCTGCCAGCATCCGCCGCTGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS CAA 90 bp GGCGGATGCTGGCAGGAGCAGATGTCTTCATGGCCTCCATGTCTGTaGGAGAGGCGACAAGCTATGTGCTCCGGCTGGCACACAGAAGAC +
Preference number: 6 (lower is better)
Translates to: GGCWQEQMSSWPPCL*ERRQAMCSGWHTED
Trigger: GTCTTCTGTGTGCCAGCCGGAGCACATAGCTTGTCGCCTCTCCAACAGACATGGAGGCCATGAAGACATCTGCTCCTGCCAGCATCCGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS TCA 72 bp GCCTCACCACGGGGTCATTCAGGTCACTGTAAACGTTaGTGCGACCCACGAACTTGTAGAGGTCGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ASPRGHSGHCKR*CDPRTCRGRAG
Trigger: CCCAGCCCGACCTCTACAAGTTCGTGGGTCGCATCAACGTTTACAGTGACCTGAATGACCCCGTGGTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS TCA 72 bp CACCACACACAGGGCAGGGACGGGGAGAAGAACGGATaGAACCATCATCATGAGCCTTCCCGGTCACACACG +
Preference number: 6 (lower is better)
Translates to: HHTQGRDGEKNG*NHHHEPSRSHT
Trigger: CGTGTGTGACCGGGAAGGCTCATGATGATGGTTTCATCCGTTCTTCTCCCCGTCCCTGCCCTGTGTGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS TCA 72 bp AGACCTAACGGAAGGTTTTCAGTGTTTTGGACGCCCTaGCCACCAGCTATCGAGGACGGGCGGGCAGCACCT +
Preference number: 6 (lower is better)
Translates to: RPNGRFSVFWTP*PPAIEDGRAAP
Trigger: AGGTGCTGCCCGCCCGTCCTCGATAGCTGGTGGTCAGGGCGTCCAAAACACTGAAAACCTTCCGTTAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
CDS GCA 72 bp CCGGAGGTGGCTCCCTGTGTCCCACGTAGATGGTCCTaGTGTCCACCCAATTCTCTTCTCCTGCACAGTATC +
Preference number: 6 (lower is better)
Translates to: PEVAPCVPRRWS*CPPNSLLLHSI
Trigger: GATACTGTGCAGGAGAAGAGAATTGGGTGGACAGCAGGACCATCTACGTGGGACACAGGGAGCCACCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000487903.5
CDS GCA 72 bp AGGGTCGGGTCTCTCTTGAGCACGTCAATGCCAACATaGTGCTCCATGAGGCTGTACAGGAGGATGGGGAGG +
Preference number: 6 (lower is better)
Translates to: RVGSLLSTSMPT*CSMRLYRRMGR
Trigger: CCTCCCCATCCTCCTGTACAGCCTCATGGAGCAGCATGTTGGCATTGACGTGCTCAAGAGAGACCCGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000415301.2
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS GCA 72 bp CCCCACATGGGAGGAGGGATCCACGTGCACCCAGCGTaGGGCAGAACAGCACTAATGGGTTCTAGAAAGCTT +
Preference number: 6 (lower is better)
Translates to: PHMGGGIHVHPA*GRTALMGSRKL
Trigger: AAGCTTTCTAGAACCCATTAGTGCTGTTCTGCCGCACGCTGGGTGCACGTGGATCCCTCCTCCCATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS GCA 72 bp TGGCCTCCATGTCTGTTGGAGAGGCGACAAGCTATGTaGTCCGGCTGGCACACAGAAGACCTGCACTCACAC +
Preference number: 6 (lower is better)
Translates to: WPPCLLERRQAM*SGWHTEDLHSH
Trigger: GTGTGAGTGCAGGTCTTCTGTGTGCCAGCCGGAGCACATAGCTTGTCGCCTCTCCAACAGACATGGAGGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS CCA 72 bp GGCAGGAGCAGATGTCTTCATGGCCTCCATGTCTGTTaGAGAGGCGACAAGCTATGTGCTCCGGCTGGCACA +
Preference number: 6 (lower is better)
Translates to: GRSRCLHGLHVC*RGDKLCAPAGT
Trigger: TGTGCCAGCCGGAGCACATAGCTTGTCGCCTCTCCAACAGACATGGAGGCCATGAAGACATCTGCTCCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS CAA 72 bp TGGCAGGAGCAGATGTCTTCATGGCCTCCATGTCTGTaGGAGAGGCGACAAGCTATGTGCTCCGGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: WQEQMSSWPPCL*ERRQAMCSGWH
Trigger: GTGCCAGCCGGAGCACATAGCTTGTCGCCTCTCCAACAGACATGGAGGCCATGAAGACATCTGCTCCTGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS CAA 90 bp CCCTTCCTTTCTGACAGTTGCTGCTCCTCGGAGATCAATGACCTCTaGTGGCATCAAGTGGCTCAGACAAGGGTCGTGCCACCCTGTGCG +
Preference number: 6 (lower is better)
Translates to: PFLSDSCCSSEINDL*WHQVAQTRVVPPCA
Trigger: CGCACAGGGTGGCACGACCCTTGTCTGAGCCACTTGATGCCACAAGAGGTCATTGATCTCCGAGGAGCAGCAACTGTCAGAAAGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CAA 90 bp CCACCCCACAGGGACCGGGTTGATTTAGTACTGGACGTGCCCAGCTaGCATCCCCTTGACATGTTGCCTAGGATGTCACCATACGGATGG +
Preference number: 6 (lower is better)
Translates to: PPHRDRVDLVLDVPS*HPLDMLPRMSPYGW
Trigger: CCATCCGTATGGTGACATCCTAGGCAACATGTCAAGGGGATGCAAGCTGGGCACGTCCAGTACTAAATCAACCCGGTCCCTGTGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS TCA 72 bp TTTTATGGCTGGATTCTCCATCCAAGCTGGCGGTGGTaGCGTGGCACGTCCCATCTCCCCGGTTGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: FYGWILHPSWRW*RGTSHLPGCWK
Trigger: TTTCCAGCAACCGGGGAGATGGGACGTGCCACGTCACCACCGCCAGCTTGGATGGAGAATCCAGCCATAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS GCA 72 bp AGCCTTGTGCTTCACACCCCTCTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCGGCACAGGACTTTCTT +
Preference number: 6 (lower is better)
Translates to: SLVLHTPLDSLC*CWPQLPAQDFL
Trigger: AAGAAAGTCCTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAGAGGGGTGTGAAGCACAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415301.2
CDS GCA 72 bp CCGGAGGTGGCTCCCTGTGTCCCACGTAGATGGTCCTaGTGTCCACCCAATTCTCTTCTCCTGCACAGATTA +
Preference number: 6 (lower is better)
Translates to: PEVAPCVPRRWS*CPPNSLLLHRL
Trigger: TAATCTGTGCAGGAGAAGAGAATTGGGTGGACAGCAGGACCATCTACGTGGGACACAGGGAGCCACCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466946.5
CDS GCA 72 bp TACTGGACGTGCCCAGCTTGCATCCCCTTGACATGTTaGCTAGGATGTCACCATACGGATGGGGCCTGCATG +
Preference number: 6 (lower is better)
Translates to: YWTCPACIPLTC*LGCHHTDGACM
Trigger: CATGCAGGCCCCATCCGTATGGTGACATCCTAGGCAACATGTCAAGGGGATGCAAGCTGGGCACGTCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS GCA 72 bp AAACCTACGAGCTTCCTCCCTGTAGCTGGCTTCCTGTaGAGTGAGCTCGAACGCCATACCGGTACCCAGAGA +
Preference number: 6 (lower is better)
Translates to: KPTSFLPVAGFL*SELERHTGTQR
Trigger: TCTCTGGGTACCGGTATGGCGTTCGAGCTCACTGCACAGGAAGCCAGCTACAGGGAGGAAGCTCGTAGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS CCA 72 bp GACAGTTGCTGCTCCTCGGAGATCAATGACCTCTTGTaGCATCAAGTGGCTCAGACAAGGGTCGTGCCACCC +
Preference number: 6 (lower is better)
Translates to: DSCCSSEINDLL*HQVAQTRVVPP
Trigger: GGGTGGCACGACCCTTGTCTGAGCCACTTGATGCCACAAGAGGTCATTGATCTCCGAGGAGCAGCAACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CAA 72 bp TTCTTGGCGACGTCCCTGTACAGGGTCGGGTCTCTCTaGAGCACGTCAATGCCAACATGCTGCTCCATGAGG +
Preference number: 6 (lower is better)
Translates to: FLATSLYRVGSL*STSMPTCCSMR
Trigger: CCTCATGGAGCAGCATGTTGGCATTGACGTGCTCAAGAGAGACCCGACCCTGTACAGGGACGTCGCCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000415301.2
ENST00000487903.5
CDS CAA 72 bp GTACTGGACGTGCCCAGCTTGCATCCCCTTGACATGTaGCCTAGGATGTCACCATACGGATGGGGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: VLDVPSLHPLDM*PRMSPYGWGLH
Trigger: ATGCAGGCCCCATCCGTATGGTGACATCCTAGGCAACATGTCAAGGGGATGCAAGCTGGGCACGTCCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614170.1
CDS CCA 72 bp CCAAAATGTGTACTTGGACGAGACGATCCTGTTGTCTaGGTATCTCTGTGGGATGTAGGCCTCTGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: PKCVLGRDDPVV*VSLWDVGLCAR
Trigger: CCGGGCGCAGAGGCCTACATCCCACAGAGATACCCAGACAACAGGATCGTCTCGTCCAAGTACACATTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000466946.5
ENST00000487903.5
CDS CCA 72 bp CCCTCCACTGCGTTACGCTCCACTCTGGCTCGGATCTaGTCAACTTTGCCTTCTATCACTCGGGGGAATATC +
Preference number: 6 (lower is better)
Translates to: PSTALRSTLARI*STLPSITRGNI
Trigger: GATATTCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
CDS CCA 72 bp AAGTTCGGAGCCCCTCCACTGCGTTACGCTCCACTCTaGCTCGGATCTGGTCAACTTTGCCTTCTATCACTC +
Preference number: 6 (lower is better)
Translates to: KFGAPPLRYAPL*LGSGQLCLLSL
Trigger: GAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGAGGGGCTCCGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
CDS CCA 72 bp GCAGCCACTGCGTTACGCTCCACTCTGGCTCGGATCTaGTCAACTTTGCCTTCTATCACTCGGGGGAATATC +
Preference number: 6 (lower is better)
Translates to: AATALRSTLARI*STLPSITRGNI
Trigger: GATATTCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489577.1
CDS CAA 90 bp ATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGCTATaGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: MPNASGPQLRSARWL*EGTARVLPSYSLCS
Trigger: AGAGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418678.5
ENST00000459908.5
CDS GCA 72 bp AGCTCCGGCAGATTTCCAGGAAGAGCTCCCTGTAGTTaGCGGAACTCCCGTCTTCTCGAGGCTTCATTATCA +
Preference number: 6 (lower is better)
Translates to: SSGRFPGRAPCS*RNSRLLEASLS
Trigger: TGATAATGAAGCCTCGAGAAGACGGGAGTTCCGGCAACTACAGGGAGCTCTTCCTGGAAATCTGCCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
ENST00000610419.1
CDS GCA 72 bp GAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTCTaGTCTCAGGAGAGGCTGTTTGGAGGATGGTACCTG +
Preference number: 6 (lower is better)
Translates to: EGTARVLPSYSL*SQERLFGGWYL
Trigger: CAGGTACCATCCTCCAAACAGCCTCTCCTGAGAGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418678.5
ENST00000459908.5
CDS CCA 72 bp AGCTTTCTCCTGCAGCCACTGCGTTACGCTCCACTCTaGCTCGGATCTGGTCAACTTTGCCTTCTATCACTC +
Preference number: 6 (lower is better)
Translates to: SFLLQPLRYAPL*LGSGQLCLLSL
Trigger: GAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGCTGCAGGAGAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489577.1
CDS CAA 72 bp TTTGGAGGATGGTACCTGTACAGGGTCGGGTCTCTCTaGAGCACGTCAATGCCAACATGCTGCTCCATGAGG +
Preference number: 6 (lower is better)
Translates to: FGGWYLYRVGSL*STSMPTCCSMR
Trigger: CCTCATGGAGCAGCATGTTGGCATTGACGTGCTCAAGAGAGACCCGACCCTGTACAGGTACCATCCTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418678.5
ENST00000459908.5
CDS CAA 72 bp TCTGACAGTTGCTGCTCCTCGGAGATCAATGACCTCTaGTGGCATCAAGTGGCTCAGACAAGGGTCGTGCCA +
Preference number: 6 (lower is better)
Translates to: SDSCCSSEINDL*WHQVAQTRVVP
Trigger: TGGCACGACCCTTGTCTGAGCCACTTGATGCCACAAGAGGTCATTGATCTCCGAGGAGCAGCAACTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CAA 90 bp CCCTCCACTGCGTTACGCTCCACTCTGGCTCGGATCTGGTCAACTTaGCCTTCTATCACTCGGGGGAATATCGAAGAATCTGCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: PSTALRSTLARIWST*PSITRGNIEESAPL
Trigger: CAAAGGAGCAGATTCTTCGATATTCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS CAA 90 bp GCAGCCACTGCGTTACGCTCCACTCTGGCTCGGATCTGGTCAACTTaGCCTTCTATCACTCGGGGGAATATCGAAGAATCTGCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: AATALRSTLARIWST*PSITRGNIEESAPL
Trigger: CAAAGGAGCAGATTCTTCGATATTCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGCAGTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489577.1
CDS CAA 90 bp GTTTTCAAAAGAATCCCACACGCCCTCTTGAACAACCCTCTCAGCTaGGAGGTAATGGAGCTCAGTCAAGGAGGCAGAGAGCTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: VFKRIPHALLNNPLS*EVMELSQGGRELLL
Trigger: AAGCAGCAGCTCTCTGCCTCCTTGACTGAGCTCCATTACCTCCAAGCTGAGAGGGTTGTTCAAGAGGGCGTGTGGGATTCTTTTGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419448.1
CDS TCA 72 bp AGGAACAGATTCCTCTGCCTTTCCGACTCCGTTTTCTaGTTATACCACGGCTCATCCCGAAAGGGCTCACTC +
Preference number: 6 (lower is better)
Translates to: RNRFLCLSDSVF*LYHGSSRKGSL
Trigger: GAGTGAGCCCTTTCGGGATGAGCCGTGGTATAATCAGAAAACGGAGTCGGAAAGGCAGAGGAATCTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS GCA 72 bp GTTAAAGAGGACCATGAAGGCCAGGAAGTCCGTGAATaGCTTGAGGAACAGATTCCTCTGCCTTTCCGACTC +
Preference number: 6 (lower is better)
Translates to: VKEDHEGQEVRE*LEEQIPLPFRL
Trigger: GAGTCGGAAAGGCAGAGGAATCTGTTCCTCAAGGCATTCACGGACTTCCTGGCCTTCATGGTCCTCTTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS CAA 72 bp GCGTTACGCTCCACTCTGGCTCGGATCTGGTCAACTTaGCCTTCTATCACTCGGGGGAATATCGAAGAATCT +
Preference number: 6 (lower is better)
Translates to: ALRSTLARIWST*PSITRGNIEES
Trigger: AGATTCTTCGATATTCCCCCGAGTGATAGAAGGCAAAGTTGACCAGATCCGAGCCAGAGTGGAGCGTAACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
ENST00000489577.1
CDS GCA 72 bp TGCAATCAGATTCACCCCTTCCTTTCTGACAGTTGCTaGTCCTCGGAGATCAATGACCTCTTGTGGCATCAA +
Preference number: 6 (lower is better)
Translates to: CNQIHPFLSDSC*SSEINDLLWHQ
Trigger: TTGATGCCACAAGAGGTCATTGATCTCCGAGGAGCAGCAACTGTCAGAAAGGAAGGGGTGAATCTGATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS GCA 72 bp GATGCAGAGTCTGCGGATGGTCCTGAACCCTGTCTATaGTCTAGATGGGTATGTGTGTTCGTATACATACAC +
Preference number: 6 (lower is better)
Translates to: DAESADGPEPCL*SRWVCVFVYIH
Trigger: GTGTATGTATACGAACACACATACCCATCTAGAGCATAGACAGGGTTCAGGACCATCCGCAGACTCTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CAA 72 bp AACCATGACAATGTCCCCAACTCGCAGCTTTCGACTTaGTTTCCGAACGAGCTTGCCGTGCTGAATGAAATG +
Preference number: 6 (lower is better)
Translates to: NHDNVPNSQLST*FPNELAVLNEM
Trigger: CATTTCATTCAGCACGGCAAGCTCGTTCGGAAACAAAGTCGAAAGCTGCGAGTTGGGGACATTGTCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS TCA 72 bp TTCGACTTTGTTTCCGAACGAGCTTGCCGTGCTGAATaGAATGAACAGGACACTGGTTCATGGCATTGTCTG +
Preference number: 6 (lower is better)
Translates to: FDFVSERACRAE*NEQDTGSWHCL
Trigger: CAGACAATGCCATGAACCAGTGTCCTGTTCATTTCATTCAGCACGGCAAGCTCGTTCGGAAACAAAGTCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS CCA 72 bp CTGTTTGATAGCCGTCACAGTAATGACAAAGAAGAGTaGAAGTCCGCTTGTCACTGGACTTGTGGGTGTATC +
Preference number: 6 (lower is better)
Translates to: LFDSRHSNDKEE*KSACHWTCGCI
Trigger: GATACACCCACAAGTCCAGTGACAAGCGGACTTCCACTCTTCTTTGTCATTACTGTGACGGCTATCAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000466946.5
ENST00000487903.5
CDS CAA 90 bp GGCTCACTCTGCCACATGTATTTCAGCACAGTGTTTATCAGGGCTTaGCTGATCAGAATGCAGAGATACACAATGAGGAACGCATTCATC +
Preference number: 6 (lower is better)
Translates to: GSLCHMYFSTVFIRA*LIRMQRYTMRNAFI
Trigger: GATGAATGCGTTCCTCATTGTGTATCTCTGCATTCTGATCAGCAAAGCCCTGATAAACACTGTGCTGAAATACATGTGGCAGAGTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS TCA 72 bp TGCTTGTTCCATCAGAAACTCAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTTGACTGCTCGACAGAA +
Preference number: 6 (lower is better)
Translates to: CLFHQKLRLLEV*ESIKMVDCSTE
Trigger: TTCTGTCGAGCAGTCAACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGATGGAACAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS TCA 72 bp ACCTTGTTCCATCAGAAACTCAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTTGACTGCTCGACAGAA +
Preference number: 6 (lower is better)
Translates to: TLFHQKLRLLEV*ESIKMVDCSTE
Trigger: TTCTGTCGAGCAGTCAACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGATGGAACAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493489.1
CDS GCA 72 bp TTCAAACACGAAATAAGCACCAAAGAAGAACACCAGTaGGTCAAACAGTCCCAGGAGCGTCCAGTAGATGAA +
Preference number: 6 (lower is better)
Translates to: FKHEISTKEEHQ*VKQSQERPVDE
Trigger: TTCATCTACTGGACGCTCCTGGGACTGTTTGACGCACTGGTGTTCTTCTTTGGTGCTTATTTCGTGTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000415301.2
ENST00000471555.5
ENST00000487903.5
CDS GCA 72 bp CTAGAAAGCTTTCTCTTATTTCAGGGGCAACTGAAATaGACATGTGACCACGTTTTGGCCACTCAGGACAGA +
Preference number: 6 (lower is better)
Translates to: LESFLLFQGQLK*TCDHVLATQDR
Trigger: TCTGTCCTGAGTGGCCAAAACGTGGTCACATGTGCATTTCAGTTGCCCCTGAAATAAGAGAAAGCTTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CCA 72 bp CTGCTAACTTTTTCTCTCGATCTTGAAGGGCCACTTTaGCAGCCTGCAGCAGCTTACAAATGCCTTCATATT +
Preference number: 6 (lower is better)
Translates to: LLTFSLDLEGPL*QPAAAYKCLHI
Trigger: AATATGAAGGCATTTGTAAGCTGCTGCAGGCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAAGTTAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000471555.5
ENST00000487903.5
CDS CAA 72 bp TTTGGCCACTCAGGACAGACAACGTATAGAGGAAATTaGTCAGCTCCAAGAGAAACAAGAAGGCAATGCAGG +
Preference number: 6 (lower is better)
Translates to: FGHSGQTTYRGN*SAPRETRRQCR
Trigger: CCTGCATTGCCTTCTTGTTTCTCTTGGAGCTGACAAATTTCCTCTATACGTTGTCTGTCCTGAGTGGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CAA 72 bp TTTCAGGGGCAACTGAAATGCACATGTGACCACGTTTaGGCCACTCAGGACAGACAACGTATAGAGGAAATT +
Preference number: 6 (lower is better)
Translates to: FQGQLKCTCDHV*ATQDRQRIEEI
Trigger: AATTTCCTCTATACGTTGTCTGTCCTGAGTGGCCAAAACGTGGTCACATGTGCATTTCAGTTGCCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CAA 90 bp TTTCTCTTATTTCAGGGGCAACTGAAATGCACATGTGACCACGTTTaGGCCACTCAGGACAGACAACGTATAGAGGAAATTTGTCAGCTC +
Preference number: 6 (lower is better)
Translates to: FLLFQGQLKCTCDHV*ATQDRQRIEEICQL
Trigger: GAGCTGACAAATTTCCTCTATACGTTGTCTGTCCTGAGTGGCCAAAACGTGGTCACATGTGCATTTCAGTTGCCCCTGAAATAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459908.5
CDS CAA 72 bp TGCCACATGTATTTCAGCACAGTGTTTATCAGGGCTTaGCTGATCAGAATGCAGAGATACACAATGAGGAAC +
Preference number: 6 (lower is better)
Translates to: CHMYFSTVFIRA*LIRMQRYTMRN
Trigger: GTTCCTCATTGTGTATCTCTGCATTCTGATCAGCAAAGCCCTGATAAACACTGTGCTGAAATACATGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000487903.5
CDS GCA 72 bp AATGAAATGAACAGGACACTGGTTCATGGCATTGTCTaGTTTATGTCGAAGCCAGTCTTCATAACCCTGTTT +
Preference number: 6 (lower is better)
Translates to: NEMNRTLVHGIV*FMSKPVFITLF
Trigger: AAACAGGGTTATGAAGACTGGCTTCGACATAAAGCAGACAATGCCATGAACCAGTGTCCTGTTCATTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375630.6
ENST00000375645.8
ENST00000418678.5
ENST00000459908.5
ENST00000466946.5
ENST00000487903.5
CDS TCA 72 bp AAATATATTATTGTGTCATATTCACCCTTCTTCTTGTaGTCTGTCAACCTCATCACCAAGACAGCTACAGAG +
Preference number: 6 (lower is better)
Translates to: KYIIVSYSPFFL*SVNLITKTATE
Trigger: CTCTGTAGCTGTCTTGGTGATGAGGTTGACAGATCACAAGAAGAAGGGTGAATATGACACAATAATATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459908.5