RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP11A (Homo sapiens)

Ensembl gene IDs: ENSG00000068650

Ensembl transcript IDs: ENST00000375630.6, ENST00000375645.7, ENST00000375645.8, ENST00000415301.1, ENST00000415301.2, ENST00000418678.5, ENST00000419448.1, ENST00000419631.1, ENST00000459908.5, ENST00000466946.5, ENST00000471555.5, ENST00000479193.1, ENST00000487903.5, ENST00000489577.1, ENST00000493489.1, ENST00000495930.1, ENST00000610419.1, ENST00000614170.1

Found 1692 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGAAGGCTGGCCGTaGTCCGACGCGTGCACGGATGAGGTGCGGCGTGGGTGTGGCCAG +
Preference number: 1 (lower is better)
Translates to: AAAALPSWLVAEGWP*SDACTDEVRRGCGQ
Trigger: CTGGCCACACCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp GCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTC +
Preference number: 1 (lower is better)
Translates to: ARRAELQCGRRAEVR*CLLGSTRVLCATPV
Trigger: GACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp CGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGC +
Preference number: 1 (lower is better)
Translates to: RRAELQCGRRAEVRC*LLGSTRVLCATPVS
Trigger: GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp GCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTaGGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCC +
Preference number: 1 (lower is better)
Translates to: AEPGGRSCSAGGGQR*GAACWDPPVSCVPP
Trigger: GGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGAC +
Preference number: 1 (lower is better)
Translates to: RSCSAGGGQRCGAAC*DPPVSCVPPPSARD
Trigger: GTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTaGCGGAAGGCTGGCCGTGCTCCGACGCGTGCACGGATGAGGTGC +
Preference number: 1 (lower is better)
Translates to: VDWGFRRPRPFPAGS*RKAGRAPTRARMRC
Trigger: GCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR GCA 90 bp TCGTGGCGGAAGGCTGGCCGTGCTCCGACGCGTGCACGGATGAGGTaGGGCGTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGG +
Preference number: 1 (lower is better)
Translates to: SWRKAGRAPTRARMR*GVGVASPAVAAWYR
Trigger: CCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CTGCGGCAGGGCTGGAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGGAGACCGAA +
Preference number: 1 (lower is better)
Translates to: LRQGWKLPAWPCPPT*HCLLHEAAGDGETE
Trigger: TTCGGTCTCCCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp ATGGACATCCTGGCACTTCTGCGGCAGGGCTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCC +
Preference number: 1 (lower is better)
Translates to: MDILALLRQGWKLPA*PCPPTWHCLLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGTCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CGGATGAGGTGCGGCGTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTaGTATAGGGCTGAGCCGAGGGGAGGTTTCAGCTTGCGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: RMRCGVGVASPAVAA*YRAEPRGGFSLRGW
Trigger: CCAGCCTCGCAAGCTGAAACCTCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCACGCCGCACCTCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GGCTCCGTGGACACCTTCTCCTTCCAGGCCGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAGGCGGCCGAGGGACAGGTGCTCTGG +
Preference number: 1 (lower is better)
Translates to: GSVDTFSFQAASVTC*EWELYQAAEGQVLW
Trigger: CCAGAGCACCTGTCCCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGAAGGAGAAGGTGTCCACGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: ALSSHVALPSPRGGR*WGDRNSASPNTQGR
Trigger: CCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp TGGCCTCCTCCCTCGAGACGGTGTGGCCTGCTTGTTCGCCCTGTCTaGTCAGACACAGGCTGGGTTGACTGGGGCTTTAGGCGGCCGCGG +
Preference number: 1 (lower is better)
Translates to: WPPPSRRCGLLVRPV*SDTGWVDWGFRRPR
Trigger: CCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGAGGAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CCA 90 bp GCCGAATGCCCAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTG +
Preference number: 1 (lower is better)
Translates to: AECPEATGVAQQPQC*VQAARVPCSRARPV
Trigger: CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CCTGGCGAGTGGCTGATGGACATCCTGGCACTTCTGCGGCAGGGCTaGAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTT +
Preference number: 1 (lower is better)
Translates to: PGEWLMDILALLRQG*KLPAWPCPPTWHCL
Trigger: AAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGTCCATCAGCCACTCGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp AGACGGTGTGGCCTGCTTGTTCGCCCTGTCTGCTCAGACACAGGCTaGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGC +
Preference number: 1 (lower is better)
Translates to: RRCGLLVRPVCSDTG*VDWGFRRPRPFPAG
Trigger: GCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CCA 90 bp GCAAGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGGTGTGGCCTGCTTGTTCGCCCTGTC +
Preference number: 1 (lower is better)
Translates to: ASRADGHPVGDAGRI*PPPSRRCGLLVRPV
Trigger: GACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR GCA 90 bp GGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTaGCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCA +
Preference number: 1 (lower is better)
Translates to: GRGAVLPVGIHPCPV*HPRQPETGSGARTP
Trigger: TGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp AGGGCAGGCGGGCTTGGACGTAACCGCAGGGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCCGAG +
Preference number: 1 (lower is better)
Translates to: RAGGLGRNRRETTPR*AGYGGASAGMMVSE
Trigger: CTCGGATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp CCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAGAGGCCACTGGTGTGGCTCAACAAC +
Preference number: 1 (lower is better)
Translates to: PLHDSAQGGPAECPS*VEPNAQRPLVWLNN
Trigger: GTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GAATGTCCCTCCTGCGTTGAGCCGAATGCCCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAT +
Preference number: 1 (lower is better)
Translates to: ECPSCVEPNAQRPLV*LNNHSAGSRRPGCH
Trigger: ATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CAGCAGAATGTCCCTCCTGCGTTGAGCCGAATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGT +
Preference number: 1 (lower is better)
Translates to: QQNVPPALSRMPRGH*CGSTTTVLGPGGQG
Trigger: ACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GCCTGGTATAGGGCTGAGCCGAGGGGAGGTTTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAGGGCCTTGTCCAGGGCACCAAGCCT +
Preference number: 1 (lower is better)
Translates to: AWYRAEPRGGFSLRG*TSLKGKGLVQGTKP
Trigger: AGGCTTGGTGCCCTGGACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTCGGCTCAGCCCTATACCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GACAGGTGCTCTGGTAGCCTGGGCTCTGCAGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTGCT +
Preference number: 1 (lower is better)
Translates to: DRCSGSLGSAERQEG*ILSRGPEAVRTHSA
Trigger: AGCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR GCA 90 bp GAACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCG +
Preference number: 1 (lower is better)
Translates to: EHHLGVDPSTGTEDV*SSQPSICLPALAPA
Trigger: CGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTaGTGGCCGGGCAAGCAGGAAACAGCAGCATGTGGCATCCACATG +
Preference number: 1 (lower is better)
Translates to: RTHHHGSTSPYGGHG*WPGKQETAACGIHM
Trigger: CATGTGGATGCCACATGCTGCTGTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp ACATTCTCCCGTAACAGTGGACTGACGGCTCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCACTTCTGCGGCAGGGCTGGAAGCTG +
Preference number: 1 (lower is better)
Translates to: TFSRNSGLTAPCPGE*LMDILALLRQGWKL
Trigger: CAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGGAGAATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGG +
Preference number: 1 (lower is better)
Translates to: PITAALGLLTHPEQR*TDPKTKESPAWGHG
Trigger: CCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp CCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCATGGCTCCACCTCACCCTATGGAGG +
Preference number: 1 (lower is better)
Translates to: PSDPALPTASGLEGC*VKDAPPWLHLTLWR
Trigger: CCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp AAACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTG +
Preference number: 1 (lower is better)
Translates to: KPLPDEQGTAVHPQG*WYPSDPALPTASGL
Trigger: CAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp CTTGTCCAGGGCACCAAGCCTTGCTCACAGAGCAGCTGGTGTAAGTaGAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAAGCCCAGA +
Preference number: 1 (lower is better)
Translates to: LVQGTKPCSQSSWCK*SCDFTPGACSAKPR
Trigger: TCTGGGCTTTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTGAGCAAGGCTTGGTGCCCTGGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GCTCTGGTAGCCTGGGCTCTGCAGAGAGGCAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTGCTTGTTCCA +
Preference number: 1 (lower is better)
Translates to: ALVAWALQRGKRGEF*VAVPRLCAPILLVP
Trigger: TGGAACAAGCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR GCA 90 bp CCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATGGACATCCTGGCACTTCTGCGGCAG +
Preference number: 1 (lower is better)
Translates to: PAKSTFSRNSGLTAP*PGEWLMDILALLRQ
Trigger: CTGCCGCAGAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGG +
Preference number: 1 (lower is better)
Translates to: PSHEHSHTGPRAAVT*DGTAVVMGTAEDGW
Trigger: CCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GTAAAGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCAGGAAACAGCAGCATGTGGCATCCA +
Preference number: 1 (lower is better)
Translates to: VKDAPPWLHLTLWRA*VVAGQAGNSSMWHP
Trigger: TGGATGCCACATGCTGCTGTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp CGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAG +
Preference number: 1 (lower is better)
Translates to: RQPETGSGARTPPWC*PLHGDRGCLLITAK
Trigger: CTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp CAGAGGCCTCTCACAGGGGCCCCTCAGCAAGGAGGCAGGATGCAGTaGAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTG +
Preference number: 1 (lower is better)
Translates to: QRPLTGAPQQGGRMQ*RTPGQCALVCGTCV
Trigger: CACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCTGAGGGGCCCCTGTGAGAGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp CCATCCAGAGGCCTCTCACAGGGGCCCCTCAGCAAGGAGGCAGGATaGAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACAT +
Preference number: 1 (lower is better)
Translates to: PSRGLSQGPLSKEAG*SAGHQDSVHLFVAH
Trigger: ATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCTGAGGGGCCCCTGTGAGAGGCCTCTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GACGGCTCTTCTCTCCCAGTGACAGCAAAGGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCG +
Preference number: 1 (lower is better)
Translates to: DGSSLPVTAKANDGR*VKTQAWGNGLCMTA
Trigger: CGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGCCTTTGCTGTCACTGGGAGAGAAGAGCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp GCAAGCAGGAAACAGCAGCATGTGGCATCCACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTCTCTCCCAGTGACAGCAAAGGCCAA +
Preference number: 1 (lower is better)
Translates to: ASRKQQHVASTCGPP*VPGRLFSPSDSKGQ
Trigger: TTGGCCTTTGCTGTCACTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACATGCTGCTGTTTCCTGCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp GTGAGTGATCCTGTGTGCAAGCCCCCATGTGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCA +
Preference number: 1 (lower is better)
Translates to: VSDPVCKPPCGHGYE*AWSQKPGNTHAAGP
Trigger: TGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCCACATGGGGGCTTGCACACAGGATCACTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp TGCGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGTGTGATGTTT +
Preference number: 1 (lower is better)
Translates to: CGWPLGTEWSLPRSV*SSQLLATLIFGVMF
Trigger: AAACATCACACCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTaGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGTTACTCTCTC +
Preference number: 1 (lower is better)
Translates to: QQMPNASGPQLRSAR*LLEGTARVLPSYSL
Trigger: GAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR CCA 90 bp GGCAGCTGTCCTGGCCACTGCATCTGGAAGGGTCATACATCTGACTaGTCATCACCCACTAATCACAGAAGCTGGCCCGACAAGCAAAAC +
Preference number: 1 (lower is better)
Translates to: GSCPGHCIWKGHTSD*SSPTNHRSWPDKQN
Trigger: GTTTTGCTTGTCGGGCCAGCTTCTGTGATTAGTGGGTGATGACCAGTCAGATGTATGACCCTTCCAGATGCAGTGGCCAGGACAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR TCA 90 bp TCAAGCAAGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTaGGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCTGC +
Preference number: 1 (lower is better)
Translates to: SSKNISRCRMLLALN*GLPGGYWKELPECC
Trigger: GCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR GCA 90 bp CCCTCAGCAAGGAGGCAGGATGCAGTGCAGGACACCAGGACAGTGTaGACTTGTTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTG +
Preference number: 1 (lower is better)
Translates to: PSARRQDAVQDTRTV*TCLWHMCVYVCACV
Trigger: CACACATGCACACACATATACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CCTGTGCGTGTTTGGGGTGTGTCCATGTGCATCTGTGTGTACGTGTaGGAGCTCACATGTGTACGATGTGTGCACGTGTGTTTACACGTC +
Preference number: 1 (lower is better)
Translates to: PVRVWGVSMCICVYV*ELTCVRCVHVCLHV
Trigger: GACGTGTAAACACACGTGCACACATCGTACACATGTGAGCTCCCACACGTACACACAGATGCACATGGACACACCCCAAACACGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp CAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATGCTTCTaGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGGAACTGC +
Preference number: 1 (lower is better)
Translates to: QAPDQARISADAECF*PSTEVCQVAIGRNC
Trigger: GCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR TCA 90 bp TGTGTGCAGGAGCTTGCACGTTTGTGGTGGGTACATGTACATATGTaGGTGATCCTGTGTGCAAGCCCCCATGTGGACATGGCTATGAGT +
Preference number: 1 (lower is better)
Translates to: CVQELARLWWVHVHM*VILCASPHVDMAMS
Trigger: ACTCATAGCCATGTCCACATGGGGGCTTGCACACAGGATCACTCACATATGTACATGTACCCACCACAAACGTGCAAGCTCCTGCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 90 bp AGGCAGGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTaGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTG +
Preference number: 1 (lower is better)
Translates to: RQDAVQDTRTVCTCL*HMCVYVCACVYSRL
Trigger: CAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp TGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTaGTGGACAAGACAAGTTGAATCCTCGTGGCATTTCCCATCTGCA +
Preference number: 1 (lower is better)
Translates to: CAFPTRTWPRETFGV*WTRQVESSWHFPSA
Trigger: TGCAGATGGGAAATGCCACGAGGATTCAACTTGTCTTGTCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 90 bp GTGTGTGTGCATGTGTGCAGTAGAAGCTCATACGTCTCTCTGCTGTaGATACACGTGTGTGAGAGCAAGCCTGTAGGAGCTTGTACATGT +
Preference number: 1 (lower is better)
Translates to: VCVHVCSRSSYVSLL*IHVCESKPVGACTC
Trigger: ACATGTACAAGCTCCTACAGGCTTGCTCTCACACACGTGTATGCACAGCAGAGAGACGTATGAGCTTCTACTGCACACATGCACACACAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp TTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATaGTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGAAGG +
Preference number: 1 (lower is better)
Translates to: FKQAPDQARISADAE*FWPSTEVCQVAIGR
Trigger: CCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR TCA 90 bp TTTAACAGGTGGTACCCTGCTAGATTGTTTAACAATCTGAGGCGGTaGGACCTAACGGAAGGTTTTCAGTGTTTTGGACGCCCTGACCAC +
Preference number: 1 (lower is better)
Translates to: FNRWYPARLFNNLRR*DLTEGFQCFGRPDH
Trigger: GTGGTCAGGGCGTCCAAAACACTGAAAACCTTCCGTTAGGTCTCACCGCCTCAGATTGTTAAACAATCTAGCAGGGTACCACCTGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR CCA 90 bp AAGGGTCATACATCTGACTGGTCATCACCCACTAATCACAGAAGCTaGCCCGACAAGCAAAACAAGATCTGCGTTTTAAATCTCTATCAC +
Preference number: 1 (lower is better)
Translates to: KGHTSDWSSPTNHRS*PDKQNKICVLNLYH
Trigger: GTGATAGAGATTTAAAACGCAGATCTTGTTTTGCTTGTCGGGCCAGCTTCTGTGATTAGTGGGTGATGACCAGTCAGATGTATGACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 90 bp GTTAGTTTAAGGCAAGTAAATACTAACTACTGCGAGGTGGAAAATTaGATGAAGACCCTGCAACGTCATTCACTGAGGATCTTCTCATCC +
Preference number: 1 (lower is better)
Translates to: VSLRQVNTNYCEVEN*MKTLQRHSLRIFSS
Trigger: GGATGAGAAGATCCTCAGTGAATGACGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAGTAGTTAGTATTTACTTGCCTTAAACTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 90 bp TTCGGCAAATTATTCCCATTTGTAAAGCTGGTGCCCTCATTTGTCTaGGAGGGTTATTTTGAGACTAAATGCATTCGTATCTGTAGGAGG +
Preference number: 1 (lower is better)
Translates to: FGKLFPFVKLVPSFV*EGYFETKCIRICRR
Trigger: CCTCCTACAGATACGAATGCATTTAGTCTCAAAATAACCCTCTCAGACAAATGAGGGCACCAGCTTTACAAATGGGAATAATTTGCCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 90 bp ATTACTTGCTTCAAAGTTAGTTTAAGGCAAGTAAATACTAACTACTaGGAGGTGGAAAATTGCATGAAGACCCTGCAACGTCATTCACTG +
Preference number: 1 (lower is better)
Translates to: ITCFKVSLRQVNTNY*EVENCMKTLQRHSL
Trigger: CAGTGAATGACGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAGTAGTTAGTATTTACTTGCCTTAAACTAACTTTGAAGCAAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 90 bp ATAAACCATCCAGCAAGACTTGAAGAATCTCCATTTGAGCTATGTTaGTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGAATATCAGCA +
Preference number: 1 (lower is better)
Translates to: INHPARLEESPFELC*FQFKQAPDQARISA
Trigger: TGCTGATATTCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTCTTCAAGTCTTGCTGGATGGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR TCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGATGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: GLTGALGGRGPSQLARGGWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp GCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGA +
Preference number: 2 (lower is better)
Translates to: AELQCGRRAEVRCCL*GSTRVLCATPVSPR
Trigger: TCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: CWVQAARVPCSRARPVTPRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: EGTWGRRARRAELQCGRRQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: EAAGVALSSHVALPSPRGGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 2 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCGATGTGGGGACGAGGTaGCGGGATGAGGGGACGTGG +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPDVGTR*RDEGTW
Trigger: CCACGTCCCCTCATCCCGTCACCTCGTCCCCACATC...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 2 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGATGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: GLTGALGGRGPSQLARGGWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 2 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 2 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCTCAGCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: QGAHLPMPIQRPLTGAPQPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...CTGAGGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: WVSLAGAPFHSVARGGRETPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp GGTGTGGCCTGCTTGTTCGCCCTGTCTGCTCAGACACAGGCTGGGTaGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGT +
Preference number: 2 (lower is better)
Translates to: GVACLFALSAQTQAG*TGALGGRGPSQLAR
Trigger: ACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRAMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: PLVWLNNHSAGSRRPGCHGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...ATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRAAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGCGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 2 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRRDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: AKPRHSARRGTLHPREAWRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 2 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGT +
Preference number: 2 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRKESPA*GHGDEG
Trigger: ACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTT...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 2 (lower is better)
Translates to: AGVALSSHVALPSPRGGRGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 2 (lower is better)
Translates to: PVCHPRQPETGSGARTPPPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTGGGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: LGWNCSGDGNRRGWVGAPRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...CGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACCGCAGGGAAACCACTCCCTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: APTHRAGGLGRNRRETTPWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...GGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPRAAVT*DGTAVV
Trigger: CACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCT...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 2 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 2 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETDGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 2 (lower is better)
Translates to: PVCHPRQPETGSGARTPPRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp AAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGG +
Preference number: 2 (lower is better)
Translates to: KYLLSSTSETPSGFH*PEPRSTAWRGAGVR
Trigger: CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTAPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 2 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPGHGYE*AWSQKP
Trigger: TGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCC...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRAAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCAGCAAGGAGGCAGGATaGAGTGCAGGACACCAGGAC +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPSKEAG*SAGHQD
Trigger: GTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCT...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACCGCAGGGAAACCACTCCCGCGGTCCCGAGGCTGTaGGCACCCATTCTGCTTGTT +
Preference number: 2 (lower is better)
Translates to: APTHRAGGLGRNRRETTPAVPRL*APILLV
Trigger: AACAAGCAGAATGGGTGCGCACAGCCTCGGGACCGC...GGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPRAAVT*DGTAVV
Trigger: CACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: WPCPPTWHCLLHEAAGDGANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTAGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 2 (lower is better)
Translates to: AGQILRRRRALRGDMGTRPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 2 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGG +
Preference number: 2 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQDAGRI*PPPSRR
Trigger: CCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTC...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CAA 90 bp GGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAACCACTCCCAGATGAGCAGGGTACG +
Preference number: 2 (lower is better)
Translates to: GRPKLSQPQHTGQAG*DVTAGKPLPDEQGT
Trigger: CGTACCCTGCTCATCTGGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACAGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 2 (lower is better)
Translates to: PCPVCHPRQPETGSGARTVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...TGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: LGLLTHPEQRWTDPKTKEPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...CTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCACCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 2 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 2 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 2 (lower is better)
Translates to: AKPRHSARRGTLHPREAWRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 2 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 2 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCTTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPFSLRG*TSLKGK
Trigger: CTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAA...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACATCTCTCTGTTGCTGTTaGCCACAGCTGCCGGCACAG +
Preference number: 2 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETSLCCC*PQLPAQ
Trigger: CTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGA...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR CAA 90 bp TGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGCCACTGGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: CMTARRVGQQNVPPA*SRMPRGHWCGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAATGGAACTGCAGTGGTaGTGGGAACCGCCGAGGATG +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPMELQW*WEPPRM
Trigger: CATCCTCGGCGGTTCCCATCACCACTGCAGTTCCAT...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 2 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTATPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGAAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 2 (lower is better)
Translates to: GLTGALGGRGPSQLARGGSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: HRAAGVSEAATSPPGPALTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGCGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 2 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWRDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 2 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGATGTGGTGCGTACATGTaGATGTGTACGTGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGCGAYM*MCTCGS
Trigger: GCTCCCACACGTACACATGCACATGTACGCACCACA...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 2 (lower is better)
Translates to: PSICLPALAPAKSTFSRNGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPRAAVT*DGTAVV
Trigger: CACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCT...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTACGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGT +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSKESPA*GHGDEG
Trigger: ACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTT...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 2 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFKRGEF*VAVPRL
Trigger: CAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTT...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR-3UTR GCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGCCGAGCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTGGCCTCCTCCCGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 2 (lower is better)
Translates to: SRADGHPVGDAGRIWPPPGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...GGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGTCTGCTCAAGCCAGTTaGTCGCTACCCTCATCTTTG +
Preference number: 2 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGSAQAS*SLPSSL
Trigger: CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGA...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCTATTGTGTAGGAGCATaGACACGCGTGTCTGTGGTA +
Preference number: 2 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPYCVGA*TRVSVV
Trigger: TACCACAGACACGCGTGTGCATGCTCCTACACAATA...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTACGCCTGCAGGAGCCTaGGCATGTGTTTGTGGTGCG +
Preference number: 2 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCTPAGA*ACVCGA
Trigger: CGCACCACAAACACATGCGCAGGCTCCTGCAGGCGT...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGATAAAGATGGTTGACTaGTCGACAGAAAGGCACTGG +
Preference number: 2 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGIKMVD*STERHW
Trigger: CCAGTGCCTTTCTGTCGAGCAGTCAACCATCTTTAT...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: AGQILRRRRALRGDMGTRVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGATGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp CCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAA +
Preference number: 2 (lower is better)
Translates to: PSARDRFWCTNTTLV*TPPRGQRMSAHHSQ
Trigger: TTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 2 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 2 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CTGGGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 2 (lower is better)
Translates to: LGLLTHPEQRWTDPKTKESRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...CTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 2 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGACTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGLDSLC*CWPQLP
Trigger: CGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAG...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: PSICLPALAPAKSTFSRNTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGATLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTALLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCC +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSLGNTL*VSLAGA
Trigger: GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp AACATTTGTTTAAACGCTCAGCAAGCCGAGCGGATGGTCACCCTGTaGGAGACGCTGGCCGCATCTGGCCTCCTCCCTCGAGACGGTGTG +
Preference number: 2 (lower is better)
Translates to: NICLNAQQAERMVTL*ETLAASGLLPRDGV
Trigger: CACACCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGCTGAGCGTTTAAACAAATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 2 (lower is better)
Translates to: TVSTGLGPSITRAFPHGTASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...GGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 2 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: QPSICLPALAPAKSTFSRAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 2 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCTCCAGCGTTGGTGGTaGTTTCCTGAAAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSLQRWW*FPERQQ
Trigger: CTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGTGTGTAGGAGCCTGTaGGTGTTTGGGGTGTGTCCA +
Preference number: 2 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQVCRSL*VFGVCP
Trigger: TGGACACACCCCAAACACGCACAGGCTCCTACACAC...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 2 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGATCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAGTGCATGTGTACGTGTaGGAGCTCACGTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQVHVYV*ELTCGR
Trigger: TCTCCCACACGTGAGCTCCCACACGTACACATGCAC...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 2 (lower is better)
Translates to: ESSPFCLLKPVARYPHLWASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...CCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGTACGTCTCTCTGCTGTaGATACACGTGTGTGAGAGC +
Preference number: 2 (lower is better)
Translates to: HRAAGVSEAATSPPGPALYVSLL*IHVCES
Trigger: GCTCTCACACACGTGTATGCACAGCAGAGAGACGTA...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp CAGTACGGAGAACAACAGGGACTTCCTATCACAGCAGCCCTGGGGTaGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAG +
Preference number: 2 (lower is better)
Translates to: QYGEQQGLPITAALG*LTHPEQRWTDPKTK
Trigger: CTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTGTTGTTCTCCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AAGAGGCACGTGCACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 2 (lower is better)
Translates to: KRHVHSLHRLRTIHHTSIASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...AATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGTGCACGTGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGATGTGGACATGGCTATaGGTGAGCGTGGAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: AKPRHSARRGTLHPREAWMWTWL*VSVEPK
Trigger: TTTTGGCTCCACGCTCACTCATAGCCATGTCCACAT...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp ACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCGACTTGGGATGGAACTaGAGTGGTGATGGGAACCGC +
Preference number: 2 (lower is better)
Translates to: TVSTGLGPSITRAFPHGTDLGWN*SGDGNR
Trigger: GCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTC...GGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 2 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCSRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGAGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGATGTGTGCAGGAGCTTaGACGTTTGTGGTGGGTACA +
Preference number: 2 (lower is better)
Translates to: AKPRHSARRGTLHPREAWMCAGA*TFVVGT
Trigger: TGTACCCACCACAAACGTGCAAGCTCCTGCACACAT...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 2 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAACCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 2 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCACGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 2 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGCACTGGCTCTTAGTCTaGACTCTCTCTGTTGCTGTT +
Preference number: 2 (lower is better)
Translates to: CGIHMWATMGPWTALLSQHWLLV*TLSVAV
Trigger: AACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTG...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR CAA 90 bp GGCCAAGGCTCAACTCAGGGGAGTCCCCACAGCCTGTCTAAACATTaGTTTAAACGCTCAGCAAGCCGAGCGGATGGTCACCCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: GQGSTQGSPHSLSKH*FKRSASRADGHPVG
Trigger: TCCAACAGGGTGACCATCCGCTCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTGAGTTGAGCCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAAATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTACCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 2 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 2 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACACATCCTCTGGTAGTTaGGGAACGGCCAGATCACTC +
Preference number: 2 (lower is better)
Translates to: PSICLPALAPAKSTFSRNTSSGS*GTARSL
Trigger: GAGTGATCTGGCCGTTCCTCAACTACCAGAGGATGT...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR GCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCACGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAGTAAATACTAACTACTaGGAGGTGGAAAATTGCATG +
Preference number: 2 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGVNTNY*EVENCM
Trigger: CATGCAATTTTCCACCTCGCAGTAGTTAGTATTTAC...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGATTCACCCCCGGGGCCTaGTCTGCAAAGCCCAGACAT +
Preference number: 2 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRFTPGA*SAKPRH
Trigger: ATGTCTGGGCTTTGCAGAGCAGGCCCCGGGGGTGAA...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCATCAGAAACTCAGGCTaGTGGAAGTCTGAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: QGLPITAALGLLTHPEQRIRNSG*WKSEKA
Trigger: TGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGAT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGATGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: SELPKIPTVEHLGNTLWVTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...AACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAGCCTGCGCCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 2 (lower is better)
Translates to: TCVYMCVHVCIHACRSLRPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...GCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 2 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAG +
Preference number: 2 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLHPEQR*TDPKTK
Trigger: CTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTG...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGCTCCTCCAGCGTTGGTaGTGCTTTCCTGAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLLLQRW*CFPERQ
Trigger: CTGCCTTTCAGGAAAGCACCACCAACGCTGGAGGAG...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: PERQQFQRLKSESHTEMSFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCACGACGCGTGCACGGATaGGGTGCGGCGTGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSRRVHG*GAAWVW
Trigger: CCACACCCACGCCGCACCTCATCCGTGCACGCGTCG...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATG +
Preference number: 2 (lower is better)
Translates to: PERQQFQRLKSESHTEMSGLTAP*PGEWLM
Trigger: CATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCC...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAGTGCTTACCTGTACATaGATGTGTGTATCACACGTC +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQVLTCT*MCVSHV
Trigger: GACGTGTGATACACACATGCATGTACAGGTAAGCAC...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CTCCAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 2 (lower is better)
Translates to: LQRWWCFPERQQFQRLKSMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...AGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACGCTACCCTCATCTTTaGTGTGATGTTTGTCACCTT +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQRYPHL*CDVCHL
Trigger: AAGGTGACAAACATCACACCAAAGATGAGGGTAGCG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCACTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGC +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSLVAEG*PCSDAC
Trigger: GCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAG...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTT +
Preference number: 2 (lower is better)
Translates to: STSETPSGFHLPEPRSTAPSSLV*CLSPYF
Trigger: AAAATAAGGTGACAAACATCACACCAAAGATGAGGG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGAGAGGCACACACTAGGTaGTCAGTAATGTCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: GVRFPQEHGRVRRLEFDGEAHTR*SVMSAP
Trigger: GGGAGCTGACATTACTGAGCACCTAGTGTGTGCCTC...TCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR CCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACTGGGAACTCATTTGTaGTGTACACATGAATGTGCA +
Preference number: 2 (lower is better)
Translates to: RAAGVSEAATSPPGPALQLGTHL*CTHECA
Trigger: TGCACATTCATGTGTACACCACAAATGAGTTCCCAG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTGGTGCTCTGGTAGCCTaGGCTCTGCAGAGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAGALVA*ALQRGK
Trigger: CTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACC...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACAAGACAAGTTGAATCCTCGTGGCATTTCCCATCTGCAGCCTTTTCGGCAAATCCAGGGCAGCTGTCCTaGCCACTGCATCTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: TRQVESSWHFPSAAFSANPGQLS*PLHLEG
Trigger: CCCTTCCAGATGCAGTGGCCAGGACAGCTGCCCTGG...ATTTGCCGAAAAGGCTGCAGATGGGAAATGCCACGAGGATTCAACTTGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR TCA 90 bp CCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTT +
Preference number: 2 (lower is better)
Translates to: PSICLPALAPAKSTFSRNRLLEV*ESIKMV
Trigger: AACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCT...GTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR GCA 90 bp AATCTGAGCTTCCAAAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGCCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: NLSFQKYLLSSTSETPSGPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...CCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTTTGGAAGCTCAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACC +
Preference number: 2 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQRAEVR*CLLGST
Trigger: GGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGAATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGAACTGCCAGAGTGCTaGCTAGTTACTCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: RISADAECFWPSTEVCQVELPEC*LVTLSA
Trigger: AGCAGAGAGAGTAACTAGGCAGCACTCTGGCAGTTC...CACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGAGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: TYRESAPATGVTFMPILGCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTATCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLSPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR CAA 90 bp CTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTTGGTGTGATGTTTGTCACCTTATTT +
Preference number: 2 (lower is better)
Translates to: LGTEWSLPRSVCSSQ*LATLIFGVMFVTLF
Trigger: AAATAAGGTGACAAACATCACACCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTCTTCTGGCCCTCAACTaGGGTCTGCCAGGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTLLALN*GLPGGY
Trigger: ATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAG...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR GCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGAGCTCATACGTCTCTCTaGTGTGCATACACGTGTGTG +
Preference number: 2 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRAHTSL*CAYTCV
Trigger: CACACACGTGTATGCACAGCAGAGAGACGTATGAGC...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTTCAGCAGATGCCGAATaGTTCTGGCCCTCAACTGAG +
Preference number: 2 (lower is better)
Translates to: PQDCQKAQESANWLHTDVSADAE*FWPSTE
Trigger: CTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGA...AACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR GCA 90 bp AGATTCCCTAGGGTCACAACGAGGAAGACGCTTGTACCCCAGCTCCCTCAGGACCACAGATGTTCCAAATaGAGCATAAACCATCCAGCA +
Preference number: 2 (lower is better)
Translates to: RFPRVTTRKTLVPQLPQDHRCSK*SINHPA
Trigger: TGCTGGATGGTTTATGCTGCATTTGGAACATCTGTG...GTCCTGAGGGAGCTGGGGTACAAGCGTCTTCCTCGTTGTGACCCTAGGGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 2 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCGCATTCATCAGAGATTaGAACATTCAGTCAAAACTC +
Preference number: 2 (lower is better)
Translates to: PRDRVESSPFCLLKPVARAFIRD*NIQSKL
Trigger: GAGTTTTGACTGAATGTTCCAATCTCTGATGAATGC...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CAA 90 bp GTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTaGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCT +
Preference number: 2 (lower is better)
Translates to: VLFSTSQCKTHELSG*KNKAGGFPRQHRTP
Trigger: AGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTCGAGACAGGTTCTGGTaGACGAACACCACCTTGGTG +
Preference number: 2 (lower is better)
Translates to: PERQQFQRLKSESHTEMSRDRFW*TNTTLV
Trigger: CACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp CAAACTGGCTCCACACAGATGTTCCAAATGCAGCATAAACCATCCAGCAAGACTCTGAGGTCTGCCAGGTaGCTATTGGAAGGAACTGCC +
Preference number: 2 (lower is better)
Translates to: QTGSTQMFQMQHKPSSKTLRSAR*LLEGTA
Trigger: GGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAG...AGTCTTGCTGGATGGTTTATGCTGCATTTGGAACATCTGTGTGGAGCCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR CAA 90 bp GAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGACAAGACAAGTaGAATCCTCGTGGCATTTCCCATCTGCAGCCTTTTCGGCAAATT +
Preference number: 2 (lower is better)
Translates to: EHGRVRRLEFDGQDK*NPRGISHLQPFRQI
Trigger: AATTTGCCGAAAAGGCTGCAGATGGGAAATGCCACGAGGATTCAACTTGTCTTGTCCATCAAACTCCAAACGTCTCACGCGGCCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR TCA 90 bp AAAAACTTCAGGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAAACAATCTGAGGCGGTaGGACCTAACGGAAGGTTTT +
Preference number: 2 (lower is better)
Translates to: KNFRCAFPTRTWPRETFGNNLRR*DLTEGF
Trigger: AAAACCTTCCGTTAGGTCTCACCGCCTCAGATTGTT...TCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACCTGAAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR GCA 90 bp CTCAGGACTGTCAGAAAGCACAGGAAAGTGCAAACTGGCTCCACACAGATGTTCAAGAATATCAGCAGATaGCGAATGCTTCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: LRTVRKHRKVQTGSTQMFKNISR*RMLLAL
Trigger: GAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTT...GAACATCTGTGTGGAGCCAGTTTGCACTTTCCTGTGCTTTCTGACAGTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AAAACTTCAGGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGGGTCATACATCTGACTaGTCATCACCCACTAATCAC +
Preference number: 2 (lower is better)
Translates to: KTSGVRFPQEHGRVRRLEGHTSD*SSPTNH
Trigger: GTGATTAGTGGGTGATGACCAGTCAGATGTATGACC...CTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACCTGAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR TCA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGAAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 2 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCACAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGATGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTTCTTTAAGGGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 2 (lower is better)
Translates to: QQFQRLKSESHTEMSSLRGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...CCTTAAAGAAGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp CCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAATCTCACACTGAAATGTCTAGCAGTTTCAGCGTCTaGAGTCTGAATCTCACACTG +
Preference number: 2 (lower is better)
Translates to: PERQQFQRLKSESHTEMSSSFSV*SLNLTL
Trigger: CAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCT...AGACATTTCAGTGTGAGATTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCC +
Preference number: 2 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISERQEG*ILSRGP
Trigger: GGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTC...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR-3UTR GCA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCAGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 2 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTAAAGGATAACTTAGGCCACAGATTCCCTAGGGTCACAACGAGGAAGACGCTTAAGGAACTGCCAGAGTaGTGCCTAGTTACTCTCTCT +
Preference number: 2 (lower is better)
Translates to: LKDNLGHRFPRVTTRKTLKELPE*CLVTLS
Trigger: AGAGAGAGTAACTAGGCAGCACTCTGGCAGTTCCTT...AAGCGTCTTCCTCGTTGTGACCCTAGGGAATCTGTGGCCTAAGTTATCCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR GCA 90 bp TCTCCATTTGAGCTATGTTGCTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGACCCTCAACTGAGGTCTaGCAGGTGGCTATTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SPFELCCFQFKQAPDQARPSTEV*QVAIGR
Trigger: CCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGG...TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CCA 90 bp GACTTTCACACTAAAACTTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 2 (lower is better)
Translates to: DFHTKTCCQRYMVTISTQSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...CTGTGTGGAGATAGTCACCATGTACCTCTGACAACAAGTTTTAGTGTGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGGAAACAGCAGCATGTaGCATCCACATGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCGNSSM*HPHVGH
Trigger: GTGGCCCACATGTGGATGCCACATGCTGCTGTTTCC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGCTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLLLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CCA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCCCCCTCGGGACAGAGTaGAGTCTTCCCCGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISPLGTE*SLPRSV
Trigger: GACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGG...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAAGGTCACACATGCTTTaGTGCATGTACACGTGTGTG +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGRSHML*CMYTCV
Trigger: CACACACGTGTACATGCACCAAAGCATGTGTGACCT...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TATTTTGAGACTAAATGCATTCGTATCTGTAGGAGGCACACACTAGGTGCTCAGCCTGGCCACTGCATCTaGAAGGGTCATACATCTGAC +
Preference number: 2 (lower is better)
Translates to: YFETKCIRICRRHTLGAQPGHCI*KGHTSD
Trigger: GTCAGATGTATGACCCTTCCAGATGCAGTGGCCAGG...CTGAGCACCTAGTGTGTGCCTCCTACAGATACGAATGCATTTAGTCTCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCT +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRLPRSV*SSQLLA
Trigger: AGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGATCTGTAGGTCACACATaGTTTGGTGCATGTACACGT +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGSVGHT*FGACTR
Trigger: ACGTGTACATGCACCAAAGCATGTGTGACCTACAGA...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGACATGTGTACGATGTGTaGACGTGTGTTTACACGTCT +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGHVYDV*TCVYTS
Trigger: AGACGTGTAAACACACGTGCACACATCGTACACATG...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGTGTGGTGCGTACATGTaGATGTGTACGTGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLCGAYM*MCTCGS
Trigger: GCTCCCACACGTACACATGCACATGTACGCACCACA...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp GGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGATATTTTGAGACTAAATaGATTCGTATCTGTAGGAGG +
Preference number: 2 (lower is better)
Translates to: GVRFPQEHGRVRRLEFDGYFETK*IRICRR
Trigger: CCTCCTACAGATACGAATGCATTTAGTCTCAAAATA...TCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR CCA 90 bp TTTCCCATCTGCAGCCTTTTCGGCAAATTATTCCCATTTGTAAAGCTGGTGCCCACTAATCACAGAAGCTaGCCCGACAAGCAAAACAAG +
Preference number: 2 (lower is better)
Translates to: FPICSLFGKLFPFVKLVPTNHRS*PDKQNK
Trigger: CTTGTTTTGCTTGTCGGGCCAGCTTCTGTGATTAGT...GGGCACCAGCTTTACAAATGGGAATAATTTGCCGAAAAGGCTGCAGATGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR TCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCATGTACATATGTGAGTaGTCCTGTGTGCAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCMYICE*SCVQAP
Trigger: GGGGGCTTGCACACAGGATCACTCACATATGTACAT...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGATGGTATGTGTACACGTaGATGTTCTGCATGTCTGTA +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGWYVYT*MFCMSV
Trigger: TACAGACATGCAGAACATGCACGTGTACACATACCA...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATTTGGTGGTGCTTTCCTaGAAGGCAGCAGTTTCAGCG +
Preference number: 2 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNLVVLS*KAAVSA
Trigger: CGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAA...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR TCA 90 bp ACATACAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTCCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTT +
Preference number: 2 (lower is better)
Translates to: TYRESAPATGVTFMPILGPSSLV*CLSPYF
Trigger: AAAATAAGGTGACAAACATCACACCAAAGATGAGGG...ACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTGTATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp GTGGTTGTATTATTCAGTACTAGTCAGTGCAAAACACATGAGCTGAGTGGTTTGTACACGTGCATGTTCTaGATGTCTGTAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: VVVLFSTSQCKTHELSGLYTCMF*MSVGHT
Trigger: TGTGTGACCTACAGACATGCAGAACATGCACGTGTA...CAAACCACTCAGCTCATGTGTTTTGCACTGACTAGTACTGAATAATACAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR GCA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGACAAATATCTGCCCGTTaGTTGTCACAGTTGTATTTT +
Preference number: 2 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGQISAR*LSQLYF
Trigger: AAAATACAACTGTGACAAGCAACGGGCAGATATTTG...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR TCA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCTGCAACGTCATTCACTaGGGATCTTCTCATCCTTTT +
Preference number: 2 (lower is better)
Translates to: AKVESHFHDTSNISHQGCCNVIH*GSSHPF
Trigger: AAAAGGATGAGAAGATCCTCAGTGAATGACGTTGCA...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR TCA 90 bp AAAGTCAGAACTTTTCTAGGCTTCCTGATACCAGAAAGACATCCATGTTTACAAATGGACAAGACAAGTTaGATCCTCGTGGCATTTCCC +
Preference number: 2 (lower is better)
Translates to: KVRTFLGFLIPERHPCLQMDKTS*ILVAFP
Trigger: GGGAAATGCCACGAGGATTCAACTTGTCTTGTCCAT...TTGTAAACATGGATGTCTTTCTGGTATCAGGAAGCCTAGAAAAGTTCTGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR GCA 90 bp AAAGTCAGAACTTTTCTAGGCTTCCTGATACCAGAAAGACATCCATGTTTACAAGTGGCATTTCCCATCTaGAGCCTTTTCGGCAAATTA +
Preference number: 2 (lower is better)
Translates to: KVRTFLGFLIPERHPCLQVAFPI*SLFGKL
Trigger: TAATTTGCCGAAAAGGCTGCAGATGGGAAATGCCAC...TTGTAAACATGGATGTCTTTCTGGTATCAGGAAGCCTAGAAAAGTTCTGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR GCA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGACAGGTGTTACATTTATaGCCATATTGGGTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: CLKCAVQLITATRNTKKRQVLHL*PYWVPK
Trigger: TTTAGGAACCCAATATGGGCATAAATGTAACACCTG...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR GCA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCCAGGTGTTACATTTATaGCCATATTGGGTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISQVLHL*PYWVPK
Trigger: TTTAGGAACCCAATATGGGCATAAATGTAACACCTG...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp AGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTaGAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCC +
Preference number: 3 (lower is better)
Translates to: RGRGDAEPGGRS*SAGGGQRCGAA
Trigger: GGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTG +
Preference number: 3 (lower is better)
Translates to: EGTWGRRARRAELQCGRRAAGVA*SSHVAL
Trigger: CAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp ACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTG +
Preference number: 3 (lower is better)
Translates to: TWGRRARRAELQ*GRRAEVRCCLL
Trigger: CAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GGGCGGCCACACAAGGACCTCAGGGCAGGGTGGCCCTaGGGACGCCTGCGGCTGGCCCCTCGGGACAGAGTG +
Preference number: 3 (lower is better)
Translates to: GRPHKDLRAGWP*GRLRLAPRDRV
Trigger: CACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCCAGGGCCACCCTGCCCTGAGGTCCTTGTGTGGCCGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGCACGGATGAGGTGCGG +
Preference number: 3 (lower is better)
Translates to: AAALPSWLVAEG*PCSDACTDEVR
Trigger: CCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTaGCGGAAGGCTGGCCGTGCTCCGACGCGTGCACGG +
Preference number: 3 (lower is better)
Translates to: GFRRPRPFPAGS*RKAGRAPTRAR
Trigger: CCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR GCA 72 bp GCCCTTCCCAGCTGGCTCGTGGCGGAAGGCTGGCCGTaGTCCGACGCGTGCACGGATGAGGTGCGGCGTGGG +
Preference number: 3 (lower is better)
Translates to: ALPSWLVAEGWP*SDACTDEVRRG
Trigger: CCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp GGCGGAAGGCTGGCCGTGCTCCGACGCGTGCACGGATaGGGTGCGGCGTGGGTGTGGCCAGTCCTGCTGTGG +
Preference number: 3 (lower is better)
Translates to: GGRLAVLRRVHG*GAAWVWPVLLW
Trigger: CCACAGCAGGACTGGCCACACCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGGCTCGTGGCGGAAGGCTGGCCGTGCTCCGACGCGTaGACGGATGAGGTGCGGCGTGGGTGTGGCCAGTCC +
Preference number: 3 (lower is better)
Translates to: WLVAEGWPCSDA*TDEVRRGCGQS
Trigger: GGACTGGCCACACCCACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GGCTGGAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGG +
Preference number: 3 (lower is better)
Translates to: GWKLPAWPCPPT*HCLLHEAAGDG
Trigger: CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGACCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACA +
Preference number: 3 (lower is better)
Translates to: GLTGALGGRGPSQLARGGPSGFH*PEPRST
Trigger: TGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR GCA 72 bp GAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGTGTCCTGTGTGCCACC +
Preference number: 3 (lower is better)
Translates to: ELQCGRRAEVRC*LLGSTRVLCAT
Trigger: GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp AGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCA +
Preference number: 3 (lower is better)
Translates to: SAGGGQRCGAAC*DPPVSCVPPPS
Trigger: TGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPTGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCAAAACGCACACACCATaGTTTGCGGGGGCAGCGTGG +
Preference number: 3 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGKTHTP*FAGAAW
Trigger: CCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTT...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGGACATCCTGGCACTTCTGCGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCC +
Preference number: 3 (lower is better)
Translates to: WTSWHFCGRAGS*RRGLVLPRGTA
Trigger: GGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGG +
Preference number: 3 (lower is better)
Translates to: CRAPRKHPLGFT*RSPVPQRGAGR
Trigger: CCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp ACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTaGCAAGCCAGGGCGGCCACACAAGGACCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: THHCLRGQRGQG*QARAATQGPQG
Trigger: GCCCTGAGGTCCTTGTGTGGCCGCCCTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRTGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAG +
Preference number: 3 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLNTTLV*TPPRGQ
Trigger: CTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGCCCAGAGGCCACTGGTGTGGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGG +
Preference number: 3 (lower is better)
Translates to: CPEATGVAQQPQ*WVQAARVPCSR
Trigger: CCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAGAGGCCACTGGTGTGG +
Preference number: 3 (lower is better)
Translates to: DSAQGGPAECPS*VEPNAQRPLVW
Trigger: CCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTaGCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCA +
Preference number: 3 (lower is better)
Translates to: AVLPVGIHPCPV*HPRQPETGSGA
Trigger: TGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GCCGCATCTGGCCTCCTCCCTCGAGACGGTGTGGCCTaGTTGTTCGCCCTGTCTGCTCAGACACAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: AASGLLPRDGVA*LFALSAQTQAG
Trigger: CCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGAGGAGGCCAGATGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CCA 72 bp CCAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCA +
Preference number: 3 (lower is better)
Translates to: PEATGVAQQPQC*VQAARVPCSRA
Trigger: TGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp TGCGGCGTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTaGTATAGGGCTGAGCCGAGGGGAGGTTTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: CGVGVASPAVAA*YRAEPRGGFSL
Trigger: CAAGCTGAAACCTCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCACGCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp AGCAAGCCGAGCGGATGGTCACCCTGTTGGAGACGCTaGCCGCATCTGGCCTCCTCCCTCGAGACGGTGTGG +
Preference number: 3 (lower is better)
Translates to: SKPSGWSPCWRR*PHLASSLETVW
Trigger: CCACACCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp CGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCCACTGGTGTGGCTCAA +
Preference number: 3 (lower is better)
Translates to: RAGWASRMSLLR*AECPEATGVAQ
Trigger: TTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp TCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCAGCCAGCCCCAACACA +
Preference number: 3 (lower is better)
Translates to: SHVALPSPRGGR*WGDRNSASPNT
Trigger: TGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp AGGGCTGAGCCGAGGGGAGGTTTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAGGGCCTTGTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: RAEPRGGFSLRG*TSLKGKGLVQG
Trigger: GCCCTGGACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTCGGCTCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCGGATGGTCACCCTGTTGGAGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGGTGTGGCCTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: ADGHPVGDAGRI*PPPSRRCGLLV
Trigger: AACAAGCAGGCCACACCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp TACGGCGGTGCATCCGCAGGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGCATCCGGATTGGAGGG +
Preference number: 3 (lower is better)
Translates to: YGGASAGMMVSE*PGPSHSIRIGG
Trigger: CCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATCATCCCTGCGGATGCACCGCCGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp CCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCGGCCCTTCCCACAGCA +
Preference number: 3 (lower is better)
Translates to: PDEQGTAVHPQG*WYPSDPALPTA
Trigger: TGCTGTGGGAAGGGCCGGGTCACTCGGATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp GCCTGGGCTCTGCAGAGAGGCAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTGTGCGCACCCATTCTG +
Preference number: 3 (lower is better)
Translates to: AWALQRGKRGEF*VAVPRLCAPIL
Trigger: CAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR TCA 72 bp TCTGGTAGCCTGGGCTCTGCAGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCCGAGGCTGTGCGCACC +
Preference number: 3 (lower is better)
Translates to: SGSLGSAERQEG*ILSRGPEAVRT
Trigger: GGTGCGCACAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTCTGCAGAGCCCAGGCTACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR GCA 72 bp AGGTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTGGGCCAGCAGAATGTC +
Preference number: 3 (lower is better)
Translates to: RWVKTQAWGNGL*MTARRVGQQNV
Trigger: GACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTaGACGAACACCACCTTGGTGTTGACCCCTCCACGG +
Preference number: 3 (lower is better)
Translates to: CVPPPSARDRFW*TNTTLVLTPPR
Trigger: CCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp TCCTGCGTTGAGCCGAATGCCCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCA +
Preference number: 3 (lower is better)
Translates to: SCVEPNAQRPLV*LNNHSAGSRRP
Trigger: TGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp CACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTaGTGGCCGGGCAAGCAGGAAACAGCAGCATGTGGC +
Preference number: 3 (lower is better)
Translates to: HHGSTSPYGGHG*WPGKQETAACG
Trigger: GCCACATGCTGCTGTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCACCACCATGGCTCCACCTCACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCAGGAAACAGCAGCATG +
Preference number: 3 (lower is better)
Translates to: APPWLHLTLWRA*VVAGQAGNSSM
Trigger: CATGCTGCTGTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp CGCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGTATGTGGGGACGGGAC +
Preference number: 3 (lower is better)
Translates to: RWTDPKTKESPA*GHGDEGMWGRD
Trigger: GTCCCGTCCCCACATACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGG +
Preference number: 3 (lower is better)
Translates to: AALGLLTHPEQR*TDPKTKESPAW
Trigger: CCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTG +
Preference number: 3 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAAAGVA*SSHVAL
Trigger: CAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: STSETPSGFHLPEPRSTANVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp GGGCTTGGACGTAACCGCAGGGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCATCCGCAGGGATGATG +
Preference number: 3 (lower is better)
Translates to: GLGRNRRETTPR*AGYGGASAGMM
Trigger: CATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp CAGGGAAACCACTCCCAGATGAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGTATCCGAGTGACCCGG +
Preference number: 3 (lower is better)
Translates to: QGNHSQMSRVRR*IRRDDGIRVTR
Trigger: CCGGGTCACTCGGATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp CCCTCGAGACGGTGTGGCCTGCTTGTTCGCCCTGTCTaGTCAGACACAGGCTGGGTTGACTGGGGCTTTAGG +
Preference number: 3 (lower is better)
Translates to: PSRRCGLLVRPV*SDTGWVDWGFR
Trigger: CCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR CCA 72 bp GTAAAGGACGCACCACCATGGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAC +
Preference number: 3 (lower is better)
Translates to: VKDAPPWLHLTL*RAWVVAGQAGN
Trigger: GTTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp TCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTGGTGTTGACCCCTCCA +
Preference number: 3 (lower is better)
Translates to: SCVPPPSARDRF*CTNTTLVLTPP
Trigger: TGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: RAAGVSEAATSPPGPALQNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 3 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGAACACCACCTTGGTGTaGACCCCTCCACGGGGACAG +
Preference number: 3 (lower is better)
Translates to: AKPRHSARRGTLHPREAWNTTLV*TPPRGQ
Trigger: CTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp CCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCATGGCTCCACCTCACC +
Preference number: 3 (lower is better)
Translates to: PALPTASGLEGC*VKDAPPWLHLT
Trigger: GGTGAGGTGGAGCCATGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GAGCATTCCCACACGGGACCTAGGGCAGCTGTGACTTaGGATGGAACTGCAGTGGTGATGGGAACCGCCGAG +
Preference number: 3 (lower is better)
Translates to: EHSHTGPRAAVT*DGTAVVMGTAE
Trigger: CTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGAATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375645.7
ENST00000415301.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GGCAAGCAGGAAACAGCAGCATGTGGCATCCACATGTaGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: GKQETAACGIHM*ATMGPWTALLS
Trigger: GGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACATGCTGCTGTTTCCTGCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCGGATTGGAGGGTTGTaGAGTAAAGGACGCACCACC +
Preference number: 3 (lower is better)
Translates to: HRAAGVSEAATSPPGPALRIGGL*SKGRTT
Trigger: GGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCG...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGATGQAG*DVTAGK
Trigger: TTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGT...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTCTCTCTCTGTTGCTGTaGGCCACAGCTGCCGGCACA +
Preference number: 3 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSLSLLL*ATAAGT
Trigger: TGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAG...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CAA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 3 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAAAAGGGCTGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTG +
Preference number: 3 (lower is better)
Translates to: CPRYRCYIYAHIGFLKRAAAGVA*SSHVAL
Trigger: CAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGC...AGCCCTTTTTAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 3 (lower is better)
Translates to: PRDRVESSPFCLLKPVARVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...GCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp GAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGAGGATGTCTGCTCATC +
Preference number: 3 (lower is better)
Translates to: ETGSGARTPPWC*PLHGDRGCLLI
Trigger: GATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp TCAACATTCTCCCGTAACAGTGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATGGACATCCTGGCACTT +
Preference number: 3 (lower is better)
Translates to: STFSRNSGLTAP*PGEWLMDILAL
Trigger: AAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGGAGAATGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp CCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGT +
Preference number: 3 (lower is better)
Translates to: PLGTEWSLPRSV*SSQLLATLIFG
Trigger: ACCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 3 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGACGCATTCATCAGAGATaGGAACATTCAGTCAAAACT +
Preference number: 3 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGRIHQR*EHSVKT
Trigger: AGTTTTGACTGAATGTTCCAATCTCTGATGAATGCG...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp CCTGTGTGCAAGCCCCCATGTGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCAGGTAACACGCATGCA +
Preference number: 3 (lower is better)
Translates to: PVCKPPCGHGYE*AWSQKPGNTHA
Trigger: TGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCCACATGGGGGCTTGCACACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GCAGATGCCGAATGCTTCTGGCCCTCAACTGAGGTCTaGCAGGTGGCTATTGGAAGGAACTGCCAGAGTGCT +
Preference number: 3 (lower is better)
Translates to: ADAECFWPSTEV*QVAIGRNCQSA
Trigger: AGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR CCA 72 bp AAAATACCTACTGTCGAGCACCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTG +
Preference number: 3 (lower is better)
Translates to: KIPTVEHLGNTL*VSLAGAPFHSV
Trigger: CACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp CCGAATGCTTCTGGCCCTCAACTGAGGTCTGCCAGGTaGCTATTGGAAGGAACTGCCAGAGTGCTGCCTAGT +
Preference number: 3 (lower is better)
Translates to: PNASGPQLRSAR*LLEGTARVLPS
Trigger: ACTAGGCAGCACTCTGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CAA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAATGCACGAACACCACCTaGGTGTTGACCCCTCCACGG +
Preference number: 3 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQCTNTT*VLTPPR
Trigger: CCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCA...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp ATGAGTGAGCGTGGAGCCAAAAGCCAGGTAACACGCATGCAGCAGGCCCACTGTGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 3 (lower is better)
Translates to: MSERGAKSQVTRMQQAHCVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...ACAGTGGGCCTGCTGCATGCGTGTTACCTGGCTTTTGGCTCCACGCTCACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTACGCACACACCATTGTTaGCGGGGGCAGCGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLRTHHC*RGQRGQ
Trigger: CTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCG...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GCTCCTGATCAAGCAAGAATATCAGCAGATGCCGAATaGTTCTGGCCCTCAACTGAGGTCTGCCAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: APDQARISADAE*FWPSTEVCQVA
Trigger: AGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR GCA 72 bp AGAAAGGCACTGGCTCTTAGTCTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCGGCACAGGACTTTCTT +
Preference number: 3 (lower is better)
Translates to: RKALALSLDSLC*CWPQLPAQDFL
Trigger: AAGAAAGTCCTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAGACTAAGAGCCAGTGCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CAA 90 bp CAGAGAATCTGCCCCCGCTACAGGTGTTACATTTATGCCCATATTGGGTTCCTAAACACCACCTTGGTGTaGACCCCTCCACGGGGACAG +
Preference number: 3 (lower is better)
Translates to: QRICPRYRCYIYAHIGFLNTTLV*TPPRGQ
Trigger: CTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT...TAGGAACCCAATATGGGCATAAATGTAACACCTGTAGCGGGGGCAGATTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGAACAGCAGCCCTGGGGTaGCTAACCCACCCAGAGCAG +
Preference number: 3 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGTAALG*LTHPEQ
Trigger: CTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGT...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp AATATCAGCAGATGCCGAATGCTTCTGGCCCTCAACTaGGGTCTGCCAGGTGGCTATTGGAAGGAACTGCCA +
Preference number: 3 (lower is better)
Translates to: NISRCRMLLALN*GLPGGYWKELP
Trigger: TGGCAGTTCCTTCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CAA 90 bp CAGCGTTGGTGGTGCTTTCCTGAAAGGCAGCAGTTTCAGCGTCTGAAGTCTGAAATCCGGATTGGAGGGTaGTTGAGTAAAGGACGCACC +
Preference number: 3 (lower is better)
Translates to: QRWWCFPERQQFQRLKSEIRIGG*LSKGRT
Trigger: GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGAT...TTCAGACTTCAGACGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCAGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CAA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGACTGCGAGGTGGAAAATaGCATGAAGACCCTGCAACG +
Preference number: 3 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRLRGGK*HEDPAT
Trigger: CGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAG...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR-3UTR CAA 90 bp TTTGTGGCACATGTGTGTATATGTGTGTGCATGTGTGTATTCACGCCTGCAGGACGGCACAGGACTTTCTaGAGGACGTCGGGAAGGAGG +
Preference number: 3 (lower is better)
Translates to: FVAHVCICVCMCVFTPAGRHRTF*RTSGRR
Trigger: CCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCCG...TCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR-3UTR CAA 90 bp GGTGTGCGTTTCCCACAAGAACATGGCCGCGTGAGACGTTTGGAGTTTGATGGATGGTACCCTGCTAGATaGTTTAACAATCTGAGGCGG +
Preference number: 3 (lower is better)
Translates to: GVRFPQEHGRVRRLEFDGWYPAR*FNNLRR
Trigger: CCGCCTCAGATTGTTAAACAATCTAGCAGGGTACCA...TCCATCAAACTCCAAACGTCTCACGCGGCCATGTTCTTGTGGGAAACGCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR TCA 72 bp GAGCTTGCACGTTTGTGGTGGGTACATGTACATATGTaGGTGATCCTGTGTGCAAGCCCCCATGTGGACATG +
Preference number: 3 (lower is better)
Translates to: ELARLWWVHVHM*VILCASPHVDM
Trigger: CATGTCCACATGGGGGCTTGCACACAGGATCACTCACATATGTACATGTACCCACCACAAACGTGCAAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp CATGTGTGCAGTAGAAGCTCATACGTCTCTCTGCTGTaGATACACGTGTGTGAGAGCAAGCCTGTAGGAGCT +
Preference number: 3 (lower is better)
Translates to: HVCSRSSYVSLL*IHVCESKPVGA
Trigger: AGCTCCTACAGGCTTGCTCTCACACACGTGTATGCACAGCAGAGAGACGTATGAGCTTCTACTGCACACATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GTGCACTTGTTTGTGGCACATGTGTGTATATGTGTGTaGATGTGTGTATTCACGCCTGCAGGAGCCTGCGCA +
Preference number: 3 (lower is better)
Translates to: VHLFVAHVCICV*MCVFTPAGACA
Trigger: TGCGCAGGCTCCTGCAGGCGTGAATACACACATGCACACACATATACACACATGTGCCACAAACAAGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GATCAAGCAAGAATATCAGCAGATGCCGAATGCTTCTaGCCCTCAACTGAGGTCTGCCAGGTGGCTATTGGA +
Preference number: 3 (lower is better)
Translates to: DQARISADAECF*PSTEVCQVAIG
Trigger: TCCAATAGCCACCTGGCAGACCTCAGTTGAGGGCCAGAAGCATTCGGCATCTGCTGATATTCTTGCTTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CAA 90 bp ACAAATAATTTGTTAACTGAACATACAGAGAATCTGCCCCCGCTACAGGTGTTAGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: TNNLLTEHTENLPPLQVLVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...TAACACCTGTAGCGGGGGCAGATTCTCTGTATGTTCAGTTAACAAATTATTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AGAAATGTAGGATGCAAGGACCTGCATATCAAGCTGTTAGACACTGAGTTGTCAAGGGGAGGTTTCAGCTaGCGAGGCTGGACCTCCCTA +
Preference number: 3 (lower is better)
Translates to: RNVGCKDLHIKLLDTELSRGGFS*RGWTSL
Trigger: TAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCT...TGACAACTCAGTGTCTAACAGCTTGATATGCAGGTCCTTGCATCCTACATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp TTGCACGTTTGTGGTGGGTACATGTACATATGTGAGTaGTCCTGTGTGCAAGCCCCCATGTGGACATGGCTA +
Preference number: 3 (lower is better)
Translates to: LHVCGGYMYICE*SCVQAPMWTWL
Trigger: TAGCCATGTCCACATGGGGGCTTGCACACAGGATCACTCACATATGTACATGTACCCACCACAAACGTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TCGCATTCATCAGAGATTGGAACATTCAGTCAAAACTCTCACCAGAATCTAAATGTGCGGTGCTGCCTGTaGGGATCCACCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: SHSSEIGTFSQNSHQNLNVRCCL*GSTRVL
Trigger: CAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC...ATTTAGATTCTGGTGAGAGTTTTGACTGAATGTTCCAATCTCTGATGAATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TGCACGTTTGTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTGCAGTAGACAGGAGCTTGCACGTTaGTGGTGGGTACATGTACAT +
Preference number: 3 (lower is better)
Translates to: CTFVVNVRVRVCVHVCSRQELAR*WWVHVH
Trigger: ATGTACATGTACCCACCACAAACGTGCAAGCTCCTG...TCTACTGCACACATGCACACACACACGCACACGTACATTCACTACAAACGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR GCA 72 bp GTAGTGAATGTACGTGTGCGTGTGTGTGTGCATGTGTaGAGTAGAAGCTCATACGTCTCTCTGCTGTGCATA +
Preference number: 3 (lower is better)
Translates to: VVNVRVRVCVHV*SRSSYVSLLCI
Trigger: TATGCACAGCAGAGAGACGTATGAGCTTCTACTGCACACATGCACACACACACGCACACGTACATTCACTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp GCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTaGCACATGTGTGTATATGTGTGTGCATGTGTGTAT +
Preference number: 3 (lower is better)
Translates to: AVQDTRTVCTCL*HMCVYVCACVY
Trigger: ATACACACATGCACACACATATACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp TCTCGTGCCCCTTGTCTATTTCAAATCATCAGGCACATTCATTTAATAATTTCCAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: SRAPCLFQIIRHIHLIISNVPPA*SRMPRG
Trigger: GCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATT...GGAAATTATTAAATGAATGTGCCTGATGATTTGAAATAGACAAGGGGCACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp CAGGGGAGTCCCCACAGCCTGTCTAAACATTTGTTTAAACGCTCAGCAAGCCGACGCATTCATCAGAGATaGGAACATTCAGTCAAAACT +
Preference number: 3 (lower is better)
Translates to: QGSPHSLSKHLFKRSASRRIHQR*EHSVKT
Trigger: AGTTTTGACTGAATGTTCCAATCTCTGATGAATGCG...TCGGCTTGCTGAGCGTTTAAACAAATGTTTAGACAGGCTGTGGGGACTCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp GCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGTGTaGTGTTTGTCACCTTATTTTATCCCAACCACTGTG +
Preference number: 3 (lower is better)
Translates to: AQASCSLPSSLV*CLSPYFIPTTV
Trigger: CACAGTGGTTGGGATAAAATAAGGTGACAAACATCACACCAAAGATGAGGGTAGCGAGCAACTGGCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR TCA 72 bp TGGTACCCTGCTAGATTGTTTAACAATCTGAGGCGGTaGGACCTAACGGAAGGTTTTCAGTGTTTTGGACGC +
Preference number: 3 (lower is better)
Translates to: WYPARLFNNLRR*DLTEGFQCFGR
Trigger: GCGTCCAAAACACTGAAAACCTTCCGTTAGGTCTCACCGCCTCAGATTGTTAAACAATCTAGCAGGGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR-3UTR CAA 90 bp GCAAAAGTAGAATCACACTTTCATGACACTTCTAACATATCCCATCAAGGCTGCGTCTGCTCAAGCCAGTaGCTCGCTACCCTCATCTTT +
Preference number: 3 (lower is better)
Translates to: AKVESHFHDTSNISHQGCVCSSQ*LATLIF
Trigger: AAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGAC...GCAGCCTTGATGGGATATGTTAGAAGTGTCATGAAAGTGTGATTCTACTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
3UTR TCA 72 bp CTCTTGTTCCATCAGAAACTCAGGCTGCTGGAAGTCTaGGAAAGCATAAAGATGGTTGACTGCTCGACAGAA +
Preference number: 3 (lower is better)
Translates to: LLFHQKLRLLEV*ESIKMVDCSTE
Trigger: TTCTGTCGAGCAGTCAACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCTGAGTTTCTGATGGAACAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR GCA 72 bp AGGCAAGTAAATACTAACTACTGCGAGGTGGAAAATTaGATGAAGACCCTGCAACGTCATTCACTGAGGATC +
Preference number: 3 (lower is better)
Translates to: RQVNTNYCEVEN*MKTLQRHSLRI
Trigger: GATCCTCAGTGAATGACGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAGTAGTTAGTATTTACTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR CCA 72 bp ACATCTGACTGGTCATCACCCACTAATCACAGAAGCTaGCCCGACAAGCAAAACAAGATCTGCGTTTTAAAT +
Preference number: 3 (lower is better)
Translates to: TSDWSSPTNHRS*PDKQNKICVLN
Trigger: ATTTAAAACGCAGATCTTGTTTTGCTTGTCGGGCCAGCTTCTGTGATTAGTGGGTGATGACCAGTCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 72 bp CCAGCAAGACTTGAAGAATCTCCATTTGAGCTATGTTaGTTCCAGTTTAAACAAGCTCCTGATCAAGCAAGA +
Preference number: 3 (lower is better)
Translates to: PARLEESPFELC*FQFKQAPDQAR
Trigger: TCTTGCTTGATCAGGAGCTTGTTTAAACTGGAAGCAACATAGCTCAAATGGAGATTCTTCAAGTCTTGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418678.5
3UTR-3UTR CAA 90 bp TGCCTTAAATGTGCTGTTCAACTAATCACTGCCACCAGAAATACCAAGAAAAGAATATCTGCCCGTTGCTaGTCACAGTTGTATTTTCAA +
Preference number: 3 (lower is better)
Translates to: CLKCAVQLITATRNTKKRISARC*SQLYFQ
Trigger: TTGAAAATACAACTGTGACAAGCAACGGGCAGATAT...TCTTTTCTTGGTATTTCTGGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
3UTR TCA 72 bp TTATTCCCATTTGTAAAGCTGGTGCCCTCATTTGTCTaGGAGGGTTATTTTGAGACTAAATGCATTCGTATC +
Preference number: 3 (lower is better)
Translates to: LFPFVKLVPSFV*EGYFETKCIRI
Trigger: GATACGAATGCATTTAGTCTCAAAATAACCCTCTCAGACAAATGAGGGCACCAGCTTTACAAATGGGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 72 bp TTCAAAGTTAGTTTAAGGCAAGTAAATACTAACTACTaGGAGGTGGAAAATTGCATGAAGACCCTGCAACGT +
Preference number: 3 (lower is better)
Translates to: FKVSLRQVNTNY*EVENCMKTLQR
Trigger: ACGTTGCAGGGTCTTCATGCAATTTTCCACCTCGCAGTAGTTAGTATTTACTTGCCTTAAACTAACTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
3UTR-3UTR CAA 90 bp AAAGTCAGAACTTTTCTAGGCTTCCTGATACCAGAAAGACATCCATGTTTACAATCTGAGAGGGTTATTTaGAGACTAAATGCATTCGTA +
Preference number: 3 (lower is better)
Translates to: KVRTFLGFLIPERHPCLQSERVI*RLNAFV
Trigger: TACGAATGCATTTAGTCTCAAAATAACCCTCTCAGA...TTGTAAACATGGATGTCTTTCTGGTATCAGGAAGCCTAGAAAAGTTCTGACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610419.1
3UTR GCA 72 bp CAACAAATTGTAAAGAAAAAGTGTAGCAAATTATCGTaGCTTAAATGTGCTGTTCAACTAATCACTGCCACC +
Preference number: 3 (lower is better)
Translates to: QQIVKKKCSKLS*LKCAVQLITAT
Trigger: GGTGGCAGTGATTAGTTGAACAGCACATTTAAGGCACGATAATTTGCTACACTTTTTCTTTACAATTTGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTTCTGCAAGGGCGCCATaGGGCAGCAGAGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGSARAP*GSRAPR
Trigger: GCGCGGTGCTCTGCTGCCGCATGGCGCCCTTGCAGA...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGGACTGACGGCTCCGTaGCCTGGCGAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGGLTAP*PGEWLM
Trigger: CATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCC...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGGGGACGCCTGCGGCTaGCCCCTCGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: WVSLAGAPFHSVARGGREGDACG*PLGTEW
Trigger: CCACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCC...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGCTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRLVAEG*PCSDAC
Trigger: GCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAG...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCCCTGTTGGAGACGCTaGCCGCATCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGPCWRR*PHLASS
Trigger: GGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGACGACGCGTGCACGGATaGGGTGCGGCGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLTGALGGRGPSQLARGGRRVHG*GAAWVW
Trigger: CCACACCCACGCCGCACCTCATCCGTGCACGCGTCG...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGACGCCTGCAGGAGCCTaGGCATGTGTTTGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRTPAGA*ACVCGA
Trigger: CGCACCACAAACACATGCGCAGGCTCCTGCAGGCGT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGGTGCTCTGGTAGCCTaGGCTCTGCAGAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRGALVA*ALQRGK
Trigger: CTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR TCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCCTGCCCGTTGCAGATaGCGTGGGGCACGTAGACAT +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGPARCR*RGARRH
Trigger: ATGTCTACGTGCCCCACGTCATCTGCAACGGGCAGG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTCCTCGATCCTCTTGGTaGTCAGCTCCAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPPRSSW*SAPAAA
Trigger: CGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGG...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPSPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: CWVQAARVPCSRARPVTPFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGCGCGCTCCCTCCCGTTaGCGCTGGGGGACGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVRAPSR*RWGTSQ
Trigger: TTGACTCGTCCCCCAGCGTCAACGGGAGGGAGCGCG...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGGGAGCGTCCAGTAGATaGACACGCGCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRGASSR*TRASAA
Trigger: TGCTGCGCTGGCGCGTGTTCATCTACTGGACGCTCC...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCGTCGGGAAGGAGGCTaGTGGTCACCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGRREGG*WSPAAR
Trigger: TCGTGCTGCTGGTGACCATCAGCCTCCTTCCCGACG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGACGACGCGTGCACGGATaGGGTGCGGCGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGRRVHG*GAAWVW
Trigger: CCACACCCACGCCGCACCTCATCCGTGCACGCGTCG...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCTCCTGCGGAAGAGCTTaGAGGCGTAGCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGSCGRA*RRSTWP
Trigger: CGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGA...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGCGGACAGGTTGTCTCTaGTCAGGCTCCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRRTGCL*SGSRCG
Trigger: GCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCG...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGTCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGSPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGGGGGACGCCTGCGGCTaGCCCCTCGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GWNCSGDGNRRGWVGAPWGDACG*PLGTEW
Trigger: CCACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCC...CCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAGGTGCGGCGTGGGTGTaGCCAGTCCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGGAAWV*PVLLWP
Trigger: CGGCCACAGCAGGACTGGCCACACCCACGCCGCACC...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGTTCCCAGCTGGCTCGTaGCGGAAGGCTGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: WVSLAGAPFHSVARGGREFPAGS*RKAGRA
Trigger: AGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAA...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGACAGCACCGGACCCCTaGCCAAGGCTCAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRTAPDP*PRLNSG
Trigger: CCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGT...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCACTCGATGGTGGCGTaGAGTCCGCCGATATCCTCC +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGHSMVA*SPPISS
Trigger: GGAGGATATCGGCGGACTTCACGCCACCATCGAGTG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: WVSLAGAPFHSVARGGREMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: EAAGVALSSHVALPSPRGPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGACTTGGGATGGAACTaGAGTGGTGATGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPDLGWN*SGDGNR
Trigger: GCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTC...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CWVQAARVPCSRARPVTPAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRSRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGLPRSV*SSQLLA
Trigger: AGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGGCGGTCCCGAGGCTGTaGGCACCCATTCTGGACTCT +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPAVPRL*APILDS
Trigger: AGAGTCCAGAATGGGTGCGCACAGCCTCGGGACCGC...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000419631.1
CDS-3UTR GCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGGCGGTCCCGAGGCTGTaGGCACCCATTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRAVPRL*APILLV
Trigger: AACAAGCAGAATGGGTGCGCACAGCCTCGGGACCGC...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATGCAGGCGTAGCACGTaGCCGCGGCCGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPCRRST*PRPSPS
Trigger: AGATGGAGACGGCCGCGGCCACGTGCTACGCCTGCA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPDGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGAAGGAGAGCCCTGCGTaGGGACATGGGGACGAGGGT +
Preference number: 4 (lower is better)
Translates to: WVSLAGAPFHSVARGGREKESPA*GHGDEG
Trigger: ACCCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTT...CTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTCTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPLLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTGCATGTGTACGTGTaGGAGCTCACGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPVHVYV*ELTCGR
Trigger: TCTCCCACACGTGAGCTCCCACACGTACACATGCAC...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGTTGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAGCTGGCTCGTGGCGGAGAAACCACTCCCAGATaGGCAGGGTACGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: GLTGALGGRGPSQLARGGETTPR*AGYGGA
Trigger: TGCACCGCCGTACCCTGCTCATCTGGGAGTGGTTTC...TCCGCCACGAGCCAGCTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGTCAGCTCCAGCAGCTaGGTGTTCCTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGVSSSS*VFLRKS
Trigger: GCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGAC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCGGCGCAGGACCGTCTTaGTCAGCTCGAACAGGACGT +
Preference number: 4 (lower is better)
Translates to: CWVQAARVPCSRARPVTPGAGPS*SARTGR
Trigger: ACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCC...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 4 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGATGAATGTGCACGTGTaGAGGAGGCTGCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRMNVHV*RRLHVC
Trigger: ACAAACGTGCAGCCTCCTGCACACGTGCACATTCAT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTTGTGTCCCACGTAGATaGTCCTGCTGTCCACCCAAT +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPCVPRR*SCCPPN
Trigger: ATTGGGTGGACAGCAGGACCATCTACGTGGGACACA...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATTCACCTGGACGGTGTaGCAGAGACAGAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPFTWTV*QRQRAR
Trigger: CCGGGCCCTCTGTCTCTGCCACACCGTCCAGGTGAA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGCAGCAGGGCATTCTTaGCGACGTCCCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGAAGHS*RRPCTG
Trigger: CCCTGTACAGGGACGTCGCCAAGAATGCCCTGCTGC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTGCGGCCCTTCCCAGCTaGCTCGTGGCGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PVCHPRQPETGSGARTPPAALPS*LVAEGW
Trigger: CCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGC...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp ACTTCTGCGGCAGGGCTGGAAGCTGCCGGCGTGGCCTaGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: TSAAGLEAAGVA*SSHVALPSPRG
Trigger: GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCCGCAGAAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp CTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTaGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: LSSTSETPSGFH*PEPRSTAWRGA
Trigger: CGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAGGCACAGGACTTTCTTaGGGACGTCGGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPGTGLS*GRREGG
Trigger: GCCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCC...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGGCAGGGACTGGGTGTaGATCAGTGACCGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGGRDWV*ISDRVS
Trigger: AGAGACACGGTCACTGATTCACACCCAGTCCCTGCC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGGCGCAGGACCGTCTTaGTCAGCTCGAACAGGACGT +
Preference number: 4 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLGAGPS*SARTGR
Trigger: ACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGAGCAGAGCACCGCGCTaGAGCTCCGGCAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVSRAPR*SSGRFP
Trigger: TGGAAATCTGCCGGAGCTGCAGCGCGGTGCTCTGCT...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTTCTGCAAGGGCGCCATaGGGCAGCAGAGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGSARAP*GSRAPR
Trigger: GCGCGGTGCTCTGCTGCCGCATGGCGCCCTTGCAGA...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTACGTCAATGCCAACATaGTGCTCCATGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SPAGGAAVREAGRGAVLPTSMPT*CSMRLY
Trigger: GTACAGCCTCATGGAGCAGCATGTTGGCATTGACGT...AGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCGCTCAACAACCACAGTaGTGGGTCCAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATAQQPQ*WVQAAR
Trigger: CCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGC...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACC +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKRAEVR*CLLGST
Trigger: GGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGCTCCAGCGTTGGTGGTaGTTTCCTGAAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRLQRWW*FPERQQ
Trigger: CTGCTGCCTTTCAGGAAAGCACCACCAACGCTGGAG...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRLPRSV*SSQLLA
Trigger: AGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAG...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGTGTATTCACGCCTaGAGGAGCCTGCGCATGTGT +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGVCIHA*RSLRMC
Trigger: ACACATGCGCAGGCTCCTGCAGGCGTGAATACACAC...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGCCTCGATCCTCTTGGTaGTCAGCTCCAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVPRSSW*SAPAAA
Trigger: CGCAGCTGCTGGAGCTGACCACCAAGAGGATCGAGG...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCCAGGCCGCGAGTGTCACCTGCTGAGAGTGGGAGCTGTACCAGGCGGCCGAGGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRPRVSPAESGSCTRRPRLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...CCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGCTCCTCCAGCGTTGGTaGTGCTTTCCTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRLLQRW*CFPERQ
Trigger: CTGCCTTTCAGGAAAGCACCACCAACGCTGGAGGAG...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACACCTGCTGTGGCCGCCTaGTATAGGGCTGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETPAVAA*YRAEPR
Trigger: CCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGG...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGGTGCGGCGTGGGTGTaGCCAGTCCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHGAAWV*PVLLWP
Trigger: CGGCCACAGCAGGACTGGCCACACCCACGCCGCACC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAACTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKLVAEG*PCSDAC
Trigger: GCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAG...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCTCGTGGCGGAAGGCTaGCCGTGCTCCGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTALVAEG*PCSDAC
Trigger: GCACGCGTCGGAGCACGGCCAGCCTTCCGCCACGAG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGTGGACTGACGGCTCCGTGCCCTGGCGAGTGGCTGATGGACATCCTGGCACTGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGG +
Preference number: 4 (lower is better)
Translates to: QWTDGSVPWRVADGHPGTDAGRI*PPPSRR
Trigger: CCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTC...AGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGCCCTGTTGGAGACGCTaGCCGCATCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARPCWRR*PHLASS
Trigger: GGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGG...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGACAGCACCGGACCCCTaGCCAAGGCTCAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRTAPDP*PRLNSG
Trigger: CCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGT...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
3UTR CAA 72 bp GCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTaGAGCCGAATGCCCAGAGGCCACTGGTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ARRVGQQNVPPA*SRMPRGHWCGS
Trigger: TGAGCCACACCAGTGGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCCCAAGCTGGCGGTGGTaGCGTGGCACGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFPSWRW*RGTSHL
Trigger: GAGATGGGACGTGCCACGTCACCACCGCCAGCTTGG...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGCAACATGCTGCTCCATaGGGCTGTACAGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPQHAAP*GCTGGW
Trigger: CCATCCTCCTGTACAGCCTCATGGAGCAGCATGTTG...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACGTCGGGAAGGAGGCTaGTGGTCACCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPRREGG*WSPAAR
Trigger: TCGTGCTGCTGGTGACCATCAGCCTCCTTCCCGACG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAATGGAACTGCAGTGGTaGTGGGAACCGCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPMELQW*WEPPRM
Trigger: CATCCTCGGCGGTTCCCATCACCACTGCAGTTCCAT...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTAPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGATGTGGGGACGAGGTaGCGGGATGAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLDVGTR*RDEGTW
Trigger: CCACGTCCCCTCATCCCGTCACCTCGTCCCCACATC...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGGACATGGCTATGAGTaGGCGTGGAGCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGGHGYE*AWSQKP
Trigger: TGGCTTTTGGCTCCACGCTCACTCATAGCCATGTCC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGGACTTGGGATGGAACTaGAGTGGTGATGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGDLGWN*SGDGNR
Trigger: GCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTC...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAACCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCGGGCGGAGCTGCAGTaGGGGAGGCGGGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HRLRTIHHTSIPTRDLGQRAELQ*GRRAEV
Trigger: CACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCG...CTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGTGTGTGTGCATGTGTaGAGTAGAAGCTCATACGTC +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGVCVHV*SRSSYV
Trigger: GACGTATGAGCTTCTACTGCACACATGCACACACAC...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGCGGAAGGCTGGCCGTaGTCCGACGCGTGCACGGAT +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHAEGWP*SDACTD
Trigger: ATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCGTCCGGCGATTTCCTaGGGCCGTCTACGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSRPAIS*GRLRCH
Trigger: ATGACAGCGTAGACGGCCCCAGGAAATCGCCGGACG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPTGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCCAGGCCGCGAGTGTCACCTGCTGAGAGTGGGAGCTGTACCAGGCGGCCGAGGACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRPRVSPAESGSCTRRPRTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...CCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGGTGGGAGCTCACGTGTaGGAGACGTGTGTTTACATG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRVGAHV*ETCVYM
Trigger: CATGTAAACACACGTCTCCCACACGTGAGCTCCCAC...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAAGCAAGCCGAGCGGATaGTCACCCTGTTGGAGACGC +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGSKPSG*SPCWRR
Trigger: GCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGCT...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
3UTR CAA 72 bp TGCTTGTTCGCCCTGTCTGCTCAGACACAGGCTGGGTaGACTGGGGCTTTAGGCGGCCGCGGCCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: CLFALSAQTQAG*TGALGGRGPSQ
Trigger: CTGGGAAGGGCCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCAGACAGGGCGAACAAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
CDS-3UTR TCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCTTTTTCTCTCGATCTTaGAGGGCCACTTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGFFSRS*RATLAA
Trigger: GGCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAA...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTCGCCAATTGCTAACGTaGTTGGGTGCTCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: DAEPGGRSCSAGGGQRCGRQLLT*LGALLK
Trigger: TTTCAAAAGAGCACCCAATCACGTTAGCAATTGGCG...ACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGAACTGGTATAAAAACTaGGGGAAGATGAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRNWYKN*GKMKQT
Trigger: CGTCTGCTTCATCTTCCCTCAGTTTTTATACCAGTT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAGATGTGGGGACGAGGTaGCGGGATGAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKDVGTR*RDEGTW
Trigger: CCACGTCCCCTCATCCCGTCACCTCGTCCCCACATC...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PVCHPRQPETGSGARTPPDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCAGTGCATACACGTGTGTaGGAGCAAGCCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPVHTRV*EQACRS
Trigger: GCTCCTACAGGCTTGCTCTCACACACGTGTATGCAC...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPERQEG*ILSRGP
Trigger: GGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR TCA 90 bp GGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGGAGAGGCAAGAGGGGTaGATTCTGAGTCGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: GWNCSGDGNRRGWVGAPWERQEG*ILSRGP
Trigger: GGGACCGCGACTCAGAATTCACCCCTCTTGCCTCTC...CCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR GCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGCCTGCACAGTATCTGTaGACGAGCGTCCGCACGAGG +
Preference number: 4 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWPAQYL*TSVRTR
Trigger: CCTCGTGCGGACGCTCGTGCACAGATACTGTGCAGG...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAAGGTCGGGCTGGGGCTaGTCACACTCGATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKRSGWG*SHSMVA
Trigger: CGCCACCATCGAGTGTGAGCAGCCCCAGCCCGACCT...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGGCCACTTTGGCAGCCTaGAGCAGCTTACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPATLAA*SSLQMP
Trigger: AGGCATTTGTAAGCTGCTGCAGGCTGCCAAAGTGGC...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTTCCTGCGGAAGAGCTTaGAGGCGTAGCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHASCGRA*RRSTWP
Trigger: CGGCCACGTGCTACGCCTGCAAGCTCTTCCGCAGGA...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGCAGCTGCGTGTTCCTaGGGAAGAGCTTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPAAACS*GRACRR
Trigger: ACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCTCGAACAGGACGTCGTaGAGGCTCTGCTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSSNRTS*RLCSSI
Trigger: GATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGA...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCACTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRALDSLC*CWPQLP
Trigger: CGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAG...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCTGGACTCTCTCTGTTaGTGTTGGCCACAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRLDSLC*CWPQLP
Trigger: CGGCAGCTGTGGCCAACAGCAACAGAGAGAGTCCAG...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ETETQPAPTHRAGGLGRNRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...GTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTTGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACC +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLRAEVR*CLLGST
Trigger: GGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCCCGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 4 (lower is better)
Translates to: CWVQAARVPCSRARPVTPVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...GGGGGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGCTCATACGTCTCTCTaGTGTGCATACACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGAHTSL*CAYTCV
Trigger: CACACACGTGTATGCACAGCAGAGAGACGTATGAGC...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCTGCTCACACTCGATaGTGGCGTGAAGTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPAAHTR*WREVRR
Trigger: TCGGCGGACTTCACGCCACCATCGAGTGTGAGCAGC...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGGTCAGGCTCCCGCTGTaGCGCAGGACCGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTAVRLPL*RRTVLL
Trigger: GAGCAAGACGGTCCTGCGCCACAGCGGGAGCCTGAC...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCCCACACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGTCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SHTGPRAAVTWDGTAVVMSPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...CATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACCCCTCCTTGCCTGCTaGGGGCCAGGAAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQPLLAC*GPGRGT
Trigger: CGTGCCTCTTCCTGGCCCCCAGCAGGCAAGGAGGGG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHATLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTTGGAAGCTGCCGGCGTaGCCTTGTCCTCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRWKLPA*PCPPTW
Trigger: CCACGTGGGAGGACAAGGCCACGCCGGCAGCTTCCA...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGTGGACTGACGGCTCCGTGCCCTGGCGAGTGGCTGATGGACATCCTGGCACTGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: QWTDGSVPWRVADGHPGTDGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...AGTGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTCAGTCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WDPPVSCVPPPSARDRFWCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...CCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCTGGGACGAGGGGACGTaGGGACGCAGAGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAWDEGT*GRRARR
Trigger: CCGCCGGGCTCTGCGTCCCCACGTCCCCTCGTCCCA...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 4 (lower is better)
Translates to: CGIHMWATMGPWTALLSQRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTARGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACTCCTCCTCCAGCGTTaGTGGTGCTTTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPLLLQR*WCFPER
Trigger: CCTTTCAGGAAAGCACCACCAACGCTGGAGGAGGAG...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRLGNTL*VSLAGA
Trigger: GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAG...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCTTTGCGGGGGCAGCGTaGGCAGGGCTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFFAGAA*AGLPSQ
Trigger: CTGGCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAA...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGGCACACGCGTGTCTGTaGTATGTGTACACGTGCATG +
Preference number: 4 (lower is better)
Translates to: AAVREAGRGAVLPVGIHPAHACL*YVYTCM
Trigger: CATGCACGTGTACACATACCACAGACACGCGTGTGC...CGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCGAGCCTGTGCGTGTTTaGGGTGTGTCCATGTGCATC +
Preference number: 4 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPEPVRV*GVSMCI
Trigger: GATGCACATGGACACACCCCAAACACGCACAGGCTC...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPFSLRG*TSLKGK
Trigger: CTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TCCCACACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGTGCGGCGTGGGTGTaGCCAGTCCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SHTGPRAAVTWDGTAVVMGAAWV*PVLLWP
Trigger: CGGCCACAGCAGGACTGGCCACACCCACGCCGCACC...CATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGTGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGTTCCCAGCTGGCTCGTaGCGGAAGGCTGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLFPAGS*RKAGRA
Trigger: AGCACGGCCAGCCTTCCGCCACGAGCCAGCTGGGAA...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GATGGTATCCGAGTGACCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGCGGCCCTTCCCAGCTaGCTCGTGGCGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DGIRVTRPFPQHPDWRVVAALPS*LVAEGW
Trigger: CCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGC...AACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGGTCACTCGGATACCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCACAGGCTGGGTTGACTaGGGCTTTAGGCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRTGWVD*GFRRPR
Trigger: CCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCCCAACACACAGGGCAGGCGGGCTTGGACGTAACCGCAGGGAAACCACTCCCTCCCTCGAGACGGTGTaGCCTGCTTGTTCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: APTHRAGGLGRNRRETTPSLETV*PACSPC
Trigger: ACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGA...GGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGACGCTGGCCGCATCTaGCCTCCTCCCTCGAGACGG +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTADAGRI*PPPSRR
Trigger: CCGTCTCGAGGGAGGAGGCCAGATGCGGCCAGCGTC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACACTCGATGGTGGCGTaGAGTCCGCCGATATCCTCC +
Preference number: 4 (lower is better)
Translates to: PCPVCHPRQPETGSGARTHSMVA*SPPISS
Trigger: GGAGGATATCGGCGGACTTCACGCCACCATCGAGTG...TGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGTTTTTCTCTCGATCTTaGAGGGCCACTTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGFFSRS*RATLAA
Trigger: GGCTGCCAAAGTGGCCCTTCAAGATCGAGAGAAAAA...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGTCCTGCATATCTGCTaGAAGTCCGGACAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLVLHIC*KSGQVV
Trigger: GACAACCTGTCCGGACTTTCAGCAGATATGCAGGAC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCAACATGCTGCTCCATaGGGCTGTACAGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATQHAAP*GCTGGW
Trigger: CCATCCTCCTGTACAGCCTCATGGAGCAGCATGTTG...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGAGCGTCCAGTAGATaGACACGCGCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: APRKHPLGFTCRSPVPQRGASSR*TRASAA
Trigger: TGCTGCGCTGGCGCGTGTTCATCTACTGGACGCTCC...ACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TTGGGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGGGCACAGGACTTTCTTaGGGACGTCGGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGWNCSGDGNRRGWVGAPGTGLS*GRREGG
Trigger: GCCTCCTTCCCGACGTCCTCAAGAAAGTCCTGTGCC...CGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTGCGAGTGTCACCTGCTaGGAGTGGGAGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHAASVTC*EWELYQ
Trigger: CTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGC...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGATGTCCCTCCTGCGTTaGGCCGAATGCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGMSLLR*AECPEA
Trigger: GGCCTCTGGGCATTCGGCTCAACGCAGGAGGGACAT...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGACACCACCTTGGTGTTaGCCCCTCCACGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLTPPWC*PLHGDR
Trigger: TCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGT...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCGACATGAGGACGAGGTaGCGGGGCAAGGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRDMRTR*RGKGMW
Trigger: CCACATCCCCTTGCCCCGTCACCTCGTCCTCATGTC...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGTTGGTGGTGCTTTCCTaGAAGGCAGCAGTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVLVVLS*KAAVSA
Trigger: CGCTGAAACTGCTGCCTTTCAGGAAAGCACCACCAA...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAAGGTCGGGCTGGGGCTaGTCACACTCGATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQRSGWG*SHSMVA
Trigger: CGCCACCATCGAGTGTGAGCAGCCCCAGCCCGACCT...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAATCGGAGCCCCTCCACTaGGTTACGCTCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKSEPLH*VTLHSG
Trigger: GCCAGAGTGGAGCGTAACGCAGTGGAGGGGCTCCGA...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACTCGGAGCCCCTCCACTaGGTTACGCTCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHSEPLH*VTLHSG
Trigger: GCCAGAGTGGAGCGTAACGCAGTGGAGGGGCTCCGA...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGACGTCGTGCAGGCTCTaGTCCTCGATCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARTSCRL*SSILLV
Trigger: CACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGT...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGTCGAACAGGACGTCGTaGAGGCTCTGCTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: QQPQCWVQAARVPCSRARSNRTS*RLCSSI
Trigger: GATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGA...CCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGACTTGGGATGGAACTaGAGTGGTGATGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRDLGWN*SGDGNR
Trigger: GCGGTTCCCATCACCACTGCAGTTCCATCCCAAGTC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGCAGAATGTCCCTCCTaGGTTGAGCCGAATGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALAECPS*VEPNAQ
Trigger: CTGGGCATTCGGCTCAACGCAGGAGGGACATTCTGC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCTGGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RLRTIHHTSIPTRDLGQLGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...CAGCTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCCTCTGGGTTTCACTTaGCGGAGCCCCGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHAPLGFT*RSPVPQ
Trigger: CTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGG...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCTTCCCCGTTCTGTCTaGTCAAGCCAGTTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: VRCCLLGSTRVLCATPVSLPRSV*SSQLLA
Trigger: AGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAG...GCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCGTGAGGAACATACAGAGAATCTaGCCCCGCTACAGGTGTTAC +
Preference number: 4 (lower is better)
Translates to: GFHLPEPRSTAWRGAGVRNIQRI*PRYRCY
Trigger: GTAACACCTGTAGCGGGGGCAGATTCTCTGTATGTT...CCTCACGCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGAGTGTGTAGGAGCCTGTaGGTGTTTGGGGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGVCRSL*VFGVCP
Trigger: TGGACACACCCCAAACACGCACAGGCTCCTACACAC...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGAGCAAGGAGGCAGGATaGAGTGCAGGACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALSKEAG*SAGHQD
Trigger: GTCCTGGTGTCCTGCACTGCATCCTGCCTCCTTGCT...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCCCGTGCTCCGACGCGTaGACGGATGAGGTGCGGCGT +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTPCSDA*TDEVRR
Trigger: ACGCCGCACCTCATCCGTGCACGCGTCGGAGCACGG...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTCGAGACGGTGTGGCCTaGTTGTTCGCCCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGRDGVA*LFALSA
Trigger: AGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCG...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGCGGACAGGTTGTCTCTaGTCAGGCTCCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PRQVLVHEHHLGVDPSTGRTGCL*SGSRCG
Trigger: GCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCG...CCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCTCACCAGCAGCACGATaGCCAGCCAGGCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGASPAAR*PARRAR
Trigger: GCGGGCCCGCCTGGCTGGCCATCGTGCTGCTGGTGA...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCTGCTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: VCSSQPSICLPALAPAKSGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...TGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCGGGAACCGCCGAGGATaGGTGGGGGCTCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGIGNRRG*VGAPWT
Trigger: TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCC...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: PQCWVQAARVPCSRARPVSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...CACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RAEVRCCLLGSTRVLCATQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...GGTGGCACACAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGTGGCATCCACATGTaGGCCACCATGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PVCHPRQPETGSGARTPPCGIHM*ATMGPW
Trigger: CCAGGGACCCATGGTGGCCCACATGTGGATGCCACA...AGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGACCCTATGGAGGGCATaGGTGGTGGCCGGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRTLWRA*VVAGQA
Trigger: TGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGT...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CGIHMWATMGPWTALLSQLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGCTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTALHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: STSETPSGFHLPEPRSTADGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...CGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGCCCGAGACAGGTTCTaGTGCACGAACACCACCTTG +
Preference number: 4 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETARDRF*CTNTTL
Trigger: CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGC...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACGGGGCAAGGGGATGTaGGGACGAGGTGACGGGATG +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQRGKGM*GRGDGM
Trigger: CATCCCGTCACCTCGTCCCCACATCCCCTTGCCCCG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGGGGACGAGGGTATGTaGGGACGGGACAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSGDEGM*GRDKGT
Trigger: CGTCCCCTTGTCCCGTCCCCACATACCCTCGTCCCC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGAGTAAAGGACGCACCCCCTGCGTGGGGACATaGGGACGAGGGTATGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGLLSKGRTPCVGT*GRGYVG
Trigger: CCCCACATACCCTCGTCCCCATGTCCCCACGCAGGG...GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCACCCGTGTCCTGGTGGGAGCTCACGTGTaGGAGACGTGTGTTTACATG +
Preference number: 4 (lower is better)
Translates to: CGRRAEVRCCLLGSTRVLVGAHV*ETCVYM
Trigger: CATGTAAACACACGTCTCCCACACGTGAGCTCCCAC...CAGGACACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGATGCTCAGACACAGGCTaGGTTGACTGGGGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGCSDTG*VDWGFR
Trigger: CCTAAAGCCCCAGTCAACCCAGCCTGTGTCTGAGCA...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCGGATGGTCACCCTGTTaGAGACGCTGGCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFGWSPC*RRWPHL
Trigger: CAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCC...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGACAGGATGGTCACCCTGTTaGAGACGCTGGCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: WNCSGDGNRRGWVGAPWTGWSPC*RRWPHL
Trigger: CAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCC...TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCGGTGCTCTGGTAGCCTaGGCTCTGCAGAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFGALVA*ALQRGK
Trigger: CTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACC...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGACAGGTGCTCTGGTAGCCTaGGCTCTGCAGAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: WNCSGDGNRRGWVGAPWTGALVA*ALQRGK
Trigger: CTTGCCTCTCTGCAGAGCCCAGGCTACCAGAGCACC...TGTCCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487903.5
CDS-3UTR TCA 90 bp ATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGGCTGGGGGCCAGGGTCCCAGCTCTTCATTaGGGTCCGACGTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: ILPGGGLFIPGRHGLGARVPALH*GPTCSP
Trigger: TGGTGAACACGTCGGACCTCAATGAAGAGCTGGGAC...CCTGGCCCCCAGCCCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGCTCGTCGGGCGAGGATaGGATGTACACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRLVGRG*DVHTGF
Trigger: AAATCCTGTGTGTACATCTCATCCTCGCCCGACGAG...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGGCCTTCCTTGCCGATaGCACCTATGCCCACGTGCG +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSGLPCR*HLCPRA
Trigger: CGCACGTGGGCATAGGTGTCATCGGCAAGGAAGGCC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGGGGTCGGGTCTCTCTTaGGCACGTCAATGCCAACAT +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGGSGLS*ARQCQH
Trigger: ATGTTGGCATTGACGTGCTCAAGAGAGACCCGACCC...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTTGAGTAAAGGACGCACCGCCCTGGCGAGTGGCTaGTGGACATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGLLSKGRTALASG*WTSWHF
Trigger: GAAGTGCCAGGATGTCCATCAGCCACTCGCCAGGGC...GGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACAGTCTCCACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCCCCGTAACAGTGGACTaGCGGCTCCGTGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: TVSTGLGPSITRAFPHGTPVTVD*RLRALA
Trigger: CGCCAGGGCACGGAGCCGTCAGTCCACTGTTACGGG...GGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTGGAGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GAAGCTGCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGTCAGAGGTACATGGTaGCTATCTCCACACAGGCAG +
Preference number: 4 (lower is better)
Translates to: EAAGVALSSHVALPSPRGVRGTW*LSPHRQ
Trigger: CTGCCTGTGTGGAGATAGTCACCATGTACCTCTGAC...GCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGCCAGGGAGCCCATCTTCCCATGCCCATCCAGAGGCCTCTCACAGGGGCCCCATGTACATATGTGAGTaGTCCTGTGTGCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GPGSPSSHAHPEASHRGPMYICE*SCVQAP
Trigger: GGGGGCTTGCACACAGGATCACTCACATATGTACAT...GGGGCCCCTGTGAGAGGCCTCTGGATGGGCATGGGAAGATGGGCTCCCTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAAGAGGGGTGAATTCTaGGTCGCGGTCCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHKRGEF*VAVPRL
Trigger: CAGCCTCGGGACCGCGACTCAGAATTCACCCCTCTT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000487903.5
CDS-3UTR GCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGGAGCCGAGGAACTTCTaGATCTCGACCGTGACGTAC +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALEPRNF*ISTVTY
Trigger: GTACGTCACGGTCGAGATGCAGAAGTTCCTCGGCTC...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAGCCACTTTGGCAGCCTaGAGCAGCTTACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRAATLAA*SSLQMP
Trigger: AGGCATTTGTAAGCTGCTGCAGGCTGCCAAAGTGGC...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAGTCAGCTCCAGCAGCTaGGTGTTCCTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKVSSSS*VFLRKS
Trigger: GCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGAC...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAAGAGCTCCCTGTAGTTaGCGGAACTCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPRAPCS*RNSRLL
Trigger: GAGAAGACGGGAGTTCCGGCAACTACAGGGAGCTCT...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AACCACTCCCAGATGAGCAGGGTACGGCGGTGCATCCGCAGGGATGATGGTATCCGGCCGAGGGACAGGTaGTCTGGTAGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: NHSQMSRVRRCIRRDDGIRPRDR*SGSLGS
Trigger: AGAGCCCAGGCTACCAGAGCACCTGTCCCTCGGCCG...GATACCATCATCCCTGCGGATGCACCGCCGTACCCTGCTCATCTGGGAGTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTGCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACACCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: LPVGIHPCPVCHPRQPETPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...TGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAATGGGGGAATGGCCTCTaGATGACAGCGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQWGNGL*MTARRV
Trigger: CACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCA...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp TGTGGCATCCACATGTGGGCCACCATGGGTCCCTGGACGGCTCTTCTCTCCCAGAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: CGIHMWATMGPWTALLSQSRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGTGGATGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTCCTCCCACGTGGCACTaGCTTCTCCACGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSPPTWH*LLHEAA
Trigger: GGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGG...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AACACCACCTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACGGCAGGGCTGGAAGCTaGCGGCGTGGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: NTTLVLTPPRGQRMSAHHGRAGS*RRGLVL
Trigger: GAGGACAAGGCCACGCCGGCAGCTTCCAGCCCTGCC...GTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAGGTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCTGGACAGATCCTAAGACGAAGGAGAGCCCTGCGTGGGGACATGGGGACGAGGACATCCTGGCACTTCTaGGGCAGGGCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGQILRRRRALRGDMGTRTSWHF*GRAGSC
Trigger: GCAGCTTCCAGCCCTGCCGCAGAAGTGCCAGGATGT...CCTCGTCCCCATGTCCCCACGCAGGGCTCTCCTTCGTCTTAGGATCTGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCCGGGCAGAGGTGCGGTaGTGCCTGTTGGGATCCACC +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESRAEVR*CLLGST
Trigger: GGTGGATCCCAACAGGCAGCACCGCACCTCTGCCCG...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGAGCTGCAGTGCGGGAGGCGGGCAGAGGTGCGGTGCTGCCTGTTGGGATCCATCTGCTCAAGCCAGTTaGTCGCTACCCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: RSCSAGGGQRCGAACWDPSAQAS*SLPSSL
Trigger: CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGA...TGGATCCCAACAGGCAGCACCGCACCTCTGCCCGCCTCCCGCACTGCAGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACACGCCTGCAGGAGCCTaGGCATGTGTTTGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHTPAGA*ACVCGA
Trigger: CGCACCACAAACACATGCGCAGGCTCCTGCAGGCGT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ATACCTACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCGCGGAAGGCTGGCCGTaGTCCGACGCGTGCACGGAT +
Preference number: 4 (lower is better)
Translates to: IPTVEHLGNTLWVSLAGAAEGWP*SDACTD
Trigger: ATCCGTGCACGCGTCGGAGCACGGCCAGCCTTCCGC...GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGTAGGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCGGCGTGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGAATGCGTTTTATGGCTaGATTCTCCATCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGVALSSHVALPSPRGGRNAFYG*ILHPSW
Trigger: CCAGCTTGGATGGAGAATCCAGCCATAAAACGCATT...CCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCACGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCATCATCGTCTTTCACCTaGACGGTGTGGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRASSSFT*TVWQRQ
Trigger: CTGTCTCTGCCACACCGTCCAGGTGAAAGACGATGA...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGCCTTGTCCTCCCACGTGGCACTGCCTTCTCCACGAGGCGGCCGGTGATGGGTCATCGTCTTTCACCTaGACGGTGTGGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: WPCPPTWHCLLHEAAGDGSSSFT*TVWQRQ
Trigger: CTGTCTCTGCCACACCGTCCAGGTGAAAGACGATGA...CCCATCACCGGCCGCCTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGTCTCTCTGTTGCTGTTaGCCACAGCTGCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: LGSTRVLCATPVSPRQVLSLCCC*PQLPAQ
Trigger: CTGTGCCGGCAGCTGTGGCCAACAGCAACAGAGAGA...CAGAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACTGTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCAACAACCACAGTGCTaGGTCCAGGCGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TVEHLGNTLWVSLAGAPFQQPQC*VQAARV
Trigger: CACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTG...GAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACAGAGGCCACTGGTGTaGCTCAACAACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPQRPLV*LNNHSA
Trigger: AGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGAGGCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGATGCCCAGAGGCCACTaGTGTGGCTCAACAACCACA +
Preference number: 4 (lower is better)
Translates to: QRPLVWLNNHSAGSRRPGMPRGH*CGSTTT
Trigger: TGTGGTTGTTGAGCCACACCAGTGGCCTCTGGGCAT...CCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTACAGGCCTGGGGGAATaGCCTCTGCATGACAGCGCG +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTATGLGE*PLHDSA
Trigger: CGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGT...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCTGGTGCACGAACACCACCTTGACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CVPPPSARDRFWCTNTTLTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...CAAGGTGGTGTTCGTGCACCAGAACCTGTCTCGGGCTGACGGGGGTGGCACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCACATGTGGGCCACCATaGGTCCCTGGACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRTCGPP*VPGRLF
Trigger: GAAGAGCCGTCCAGGGACCCATGGTGGCCCACATGT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGACCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCCCGTGCCCTGGCGAGTaGCTGATGGACATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSPCPGE*LMDILA
Trigger: TGCCAGGATGTCCATCAGCCACTCGCCAGGGCACGG...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTAAAAACGCACACACCATTGTTTGCGGGGGCAGCGTGGGCAGGGCTGCCAAGCGACGGCTCCGTGCCCTaGCGAGTGGCTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: VKTHTPLFAGAAWAGLPSDGSVP*RVADGH
Trigger: ATGTCCATCAGCCACTCGCCAGGGCACGGAGCCGTC...GCTTGGCAGCCCTGCCCACGCTGCCCCCGCAAACAATGGTGTGTGCGTTTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGTGCGGTGCTGCCTGTTaGGATCCACCCGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: HRAAGVSEAATSPPGPALCGAAC*DPPVSC
Trigger: ACAGGACACGGGTGGATCCCAACAGGCAGCACCGCA...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGCACCCAGAGCAGCGCTaGACAGATCCTAAGACGAAG +
Preference number: 4 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTHPEQR*TDPKTK
Trigger: CTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTG...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCTCGGAAACACCCTCTaGGTTTCACTTGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHALGNTL*VSLAGA
Trigger: GGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAG...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTGGGGACGCCTGCGGCTaGCCCCTCGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCGDACG*PLGTEW
Trigger: CCACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCC...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGGCTCAACTCAGGGGGTGGGAGCTCACGTGTaGGAGACGTGTGTTTACATG +
Preference number: 4 (lower is better)
Translates to: AGGFPRQHRTPGQGSTQGVGAHV*ETCVYM
Trigger: CATGTAAACACACGTCTCCCACACGTGAGCTCCCAC...CCCCTGAGTTGAGCCTTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGTTCAGCTTGCGAGGCTaGACCTCCCTAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTFSLRG*TSLKGK
Trigger: CTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAA...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCACAGGCTGGGTTGACTaGGGCTTTAGGCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTTGWVD*GFRRPR
Trigger: CCGCGGCCGCCTAAAGCCCCAGTCAACCCAGCCTGT...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487903.5
3UTR CAA 72 bp TTAAACGCTCAGCAAGCCGAGCGGATGGTCACCCTGTaGGAGACGCTGGCCGCATCTGGCCTCCTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: LNAQQAERMVTL*ETLAASGLLPR
Trigger: TCGAGGGAGGAGGCCAGATGCGGCCAGCGTCTCCAACAGGGTGACCATCCGCTCGGCTTGCTGAGCGTTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000487903.5
CDS-3UTR TCA 90 bp CGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCATCCGACTCCGTTTTCTaGTTATACCACGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: RTTMAPPHPMEGMGGGRASDSVF*LYHGSS
Trigger: GGATGAGCCGTGGTATAATCAGAAAACGGAGTCGGA...TGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp CTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTTCTGCATCTCGACCGTaGCGTACATGGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: LVWLNNHSAGSRRPGCHASASRP*RTWTQG
Trigger: TCCCTGTGTCCATGTACGTCACGGTCGAGATGCAGA...AGCATGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCACTCGTCGGGCGAGGATaGGATGTACACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPLVGRG*DVHTGF
Trigger: AAATCCTGTGTGTACATCTCATCCTCGCCCGACGAG...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GCCACTGGTGTGGCTCAACAACCACAGTGCTGGGTCCAGGCGGCCAGGGTGCCAGTCCTGCATATCTGCTaGAAGTCCGGACAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: ATGVAQQPQCWVQAARVPVLHIC*KSGQVV
Trigger: GACAACCTGTCCGGACTTTCAGCAGATATGCAGGAC...TGGCACCCTGGCCGCCTGGACCCAGCACTGTGGTTGTTGAGCCACACCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGTGCTGGGTCCAGGCGGCCAGGGTGCCATGCTCGAGGGCAAGGCCTGTGACCCTTCCAGAATCATGCTaGCATCATTTGCACCATCGC +
Preference number: 4 (lower is better)
Translates to: QCWVQAARVPCSRARPVTLPESC*HHLHHR
Trigger: GCGATGGTGCAAATGATGTCAGCATGATTCTGGAAG...GGTCACAGGCCTTGCCCTCGAGCATGGCACCCTGGCCGCCTGGACCCAGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCCGTCGGGAAGGAGGCTaGTGGTCACCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTRREGG*WSPAAR
Trigger: TCGTGCTGCTGGTGACCATCAGCCTCCTTCCCGACG...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCCGTCGGGAAGGAGGCTaGTGGTCACCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESRREGG*WSPAAR
Trigger: TCGTGCTGCTGGTGACCATCAGCCTCCTTCCCGACG...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCATGGAACTGCAGTGGTaGTGGGAACCGCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRMELQW*WEPPRM
Trigger: CATCCTCGGCGGTTCCCATCACCACTGCAGTTCCAT...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGAGTCTTCCCCGTTCTGTCTGCTCAAGCCAGTTGCTCGCTACCCTCATCTTTGGGAATGGCCTCTGCATaGCAGCGCGCAGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GVFPVLSAQASCSLPSSLGMASA*QRAGWA
Trigger: GGCCCACCCTGCGCGCTGTCATGCAGAGGCCATTCC...CAAAGATGAGGGTAGCGAGCAACTGGCTTGAGCAGACAGAACGGGGAAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGGATTGGAGGGTTGTTaGGTAAAGGACGCACCACCA +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKGLEGC*VKDAPP
Trigger: TGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAATGATGGTATCCGAGTaGCCCGGCCCTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQMMVSE*PGPSHS
Trigger: GCTGTGGGAAGGGCCGGGTCACTCGGATACCATCAT...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR TCA 90 bp GAGGGGAGGTTTCAGCTTGCGAGGCTGGACCTCCCTAAAGGGGAAGGGCCTTGTGTGCATCCGCAGGGATaGTGGTATCCGAGTGACCCG +
Preference number: 4 (lower is better)
Translates to: EGRFQLARLDLPKGEGPCVHPQG*WYPSDP
Trigger: CGGGTCACTCGGATACCATCATCCCTGCGGATGCAC...ACAAGGCCCTTCCCCTTTAGGGAGGTCCAGCCTCGCAAGCTGAAACCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CTTGGTGTTGACCCCTCCACGGGGACAGAGGATGTCTGCTCATCACAGCCAAGTCCACGAGGCGGCCGGTaGTGGGGAGACCGAAACTCA +
Preference number: 4 (lower is better)
Translates to: LGVDPSTGTEDVCSSQPSPRGGR*WGDRNS
Trigger: TGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGTGG...ACTTGGCTGTGATGAGCAGACATCCTCTGTCCCCGTGGAGGGGTCAACACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CGAGGGACAGGTGCTCTGGTAGCCTGGGCTCTTGTTCCATCAGAAACTCAGGCTGATGTGGGGACGAGGTaGCGGGATGAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: RGTGALVAWALVPSETQADVGTR*RDEGTW
Trigger: CCACGTCCCCTCATCCCGTCACCTCGTCCCCACATC...AGCCTGAGTTTCTGATGGAACAAGAGCCCAGGCTACCAGAGCACCTGTCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471555.5
CDS-3UTR TCA 90 bp TCCAGGCCGCGAGTGTCACCTGCTGAGAGTGGGAGCTGTACCAGGCGGCCGAGGATGTGGACATGGCTATaGGTGAGCGTGGAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: SRPRVSPAESGSCTRRPRMWTWL*VSVEPK
Trigger: TTTTGGCTCCACGCTCACTCATAGCCATGTCCACAT...CCTCGGCCGCCTGGTACAGCTCCCACTCTCAGCAGGTGACACTCGCGGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp GTGGGTGAAGACACAGGCCTGGGGGAATGGCCTCTGCATGACAGCGCGCAGGGTGTGCATACACGTGTGTaGGAGCAAGCCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VGEDTGLGEWPLHDSAQGVHTRV*EQACRS
Trigger: GCTCCTACAGGCTTGCTCTCACACACGTGTATGCAC...ACCCTGCGCGCTGTCATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCTCGGAGCCCCTCCACTaGGTTACGCTCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESSEPLH*VTLHSG
Trigger: GCCAGAGTGGAGCGTAACGCAGTGGAGGGGCTCCGA...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGCCACTTTGGCAGCCTaGAGCAGCTTACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPATLAA*SSLQMP
Trigger: AGGCATTTGTAAGCTGCTGCAGGCTGCCAAAGTGGC...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTAACAGTGGACTGACGGCTGTCAGCTCCAGCAGCTaGGTGTTCCTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PALAPAKSTFSRNSGLTAVSSSS*VFLRKS
Trigger: GCTCTTCCGCAGGAACACGCAGCTGCTGGAGCTGAC...AGCCGTCAGTCCACTGTTACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACACGTCGTGCAGGCTCTaGTCCTCGATCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHTSCRL*SSILLV
Trigger: CACCAAGAGGATCGAGGAGCAGAGCCTGCACGACGT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CAGGGACTTCCTATCACAGCAGCCCTGGGGTTGCTAACCCACCCAGAGCAGCGCTCGAACAGGACGTCGTaGAGGCTCTGCTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: QGLPITAALGLLTHPEQRSNRTS*RLCSSI
Trigger: GATCGAGGAGCAGAGCCTGCACGACGTCCTGTTCGA...GCGCTGCTCTGGGTGGGTTAGCAACCCCAGGGCTGCTGTGATAGGAAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp CGAGACAGGTTCTGGTGCACGAACACCACCTTGGTGTTGACCCCTCCACGGGGAGGCGCAGGACCGTCTTaGTCAGCTCGAACAGGACGT +
Preference number: 4 (lower is better)
Translates to: RDRFWCTNTTLVLTPPRGGAGPS*SARTGR
Trigger: ACGTCCTGTTCGAGCTGAGCAAGACGGTCCTGCGCC...TCCCCGTGGAGGGGTCAACACCAAGGTGGTGTTCGTGCACCAGAACCTGTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAAAGCAGAGCACCGCGCTaGAGCTCCGGCAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQSRAPR*SSGRFP
Trigger: TGGAAATCTGCCGGAGCTGCAGCGCGGTGCTCTGCT...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGGCTAACGTGATTGGGTaGTCTTTTGAAAATTTGATT +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRANVIG*SFENLI
Trigger: AATCAAATTTTCAAAAGAGCACCCAATCACGTTAGC...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GTGGGTGTGGCCAGTCCTGCTGTGGCCGCCTGGTATAGGGCTGAGCCGAGGGGATCAATGCCAACATGCTaGTCCATGAGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: VGVASPAVAAWYRAEPRGSMPTC*SMRLYR
Trigger: CCTGTACAGCCTCATGGAGCAGCATGTTGGCATTGA...TCCCCTCGGCTCAGCCCTATACCAGGCGGCCACAGCAGGACTGGCCACACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp CGGCTGGCCCCTCGGGACAGAGTGGAGTCTTCCCCGTTCTGTCTGCTCAAGCCACCAGGAAGAGGCACGTaGACAGTCTCCACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: RLAPRDRVESSPFCLLKPPGRGT*TVSTGL
Trigger: TAAGCCTGTGGAGACTGTGCACGTGCCTCTTCCTGG...TGGCTTGAGCAGACAGAACGGGGAAGACTCCACTCTGTCCCGAGGGGCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAAGCAGGGTACGGCGGTaGATCCGCAGGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQSRVRR*IRRDDG
Trigger: ACCATCATCCCTGCGGATGCACCGCCGTACCCTGCT...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGGGACAGAGGATGTCTaGTCATCACAGCCAAGTATC +
Preference number: 4 (lower is better)
Translates to: GRTTMAPPHPMEGMGGGRGTEDV*SSQPSI
Trigger: GATACTTGGCTGTGATGAGCAGACATCCTCTGTCCC...CCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp ACGGGACCTAGGGCAGCTGTGACTTGGGATGGAACTGCAGTGGTGATGGGAACCGCAGAGGTGCGGTGCTaGCTGTTGGGATCCACCCGT +
Preference number: 4 (lower is better)
Translates to: TGPRAAVTWDGTAVVMGTAEVRC*LLGSTR
Trigger: ACGGGTGGATCCCAACAGGCAGCACCGCACCTCTGC...GGTTCCCATCACCACTGCAGTTCCATCCCAAGTCACAGCTGCCCTAGGTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGGACGCACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGTGAGTGATCCTGTGTaGAAGCCCCCATGTGGACAT +
Preference number: 4 (lower is better)
Translates to: RTHHHGSTSPYGGHGWWPVSDPV*KPPCGH
Trigger: ATGTCCACATGGGGGCTTGCACACAGGATCACTCAC...CGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp TTGGGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGGTGTGTAGGAGCCTGTaGGTGTTTGGGGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGWNCSGDGNRRGWVGAPVCRSL*VFGVCP
Trigger: TGGACACACCCCAAACACGCACAGGCTCCTACACAC...CGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAATTCACCCCCGGGGCCTaGTCTGCAAAGCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQFTPGA*SAKPRH
Trigger: ATGTCTGGGCTTTGCAGAGCAGGCCCCGGGGGTGAA...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR GCA 90 bp AGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGCAACGAGACGGTGTGGCCTaGTTGTTCGCCCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RAAGVSEAATSPPGPALQRDGVA*LFALSA
Trigger: AGCAGACAGGGCGAACAAGCAGGCCACACCGTCTCG...TTGCAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR GCA 90 bp GAGGGGACGTGGGGACGCAGAGCCCGGCGGGCGGAGCTGCAGTGCGGGAGGCGGACTTTTATTCTTTATTaGAAGCAGATTCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EGTWGRRARRAELQCGRRTFILY*KQIQVS
Trigger: GGAGACCTGAATCTGCTTGCAATAAAGAATAAAAGT...CCGCCTCCCGCACTGCAGCTCCGCCCGCCGGGCTCTGCGTCCCCACGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CACAGAGCAGCTGGTGTAAGTGAAGCTGCGACTTCACCCCCGGGGCCTGCTCTGGTCTGGGTATCTCTGTaGGATGTAGGCCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: HRAAGVSEAATSPPGPALVWVSL*DVGLCA
Trigger: GGCGCAGAGGCCTACATCCCACAGAGATACCCAGAC...CAGAGCAGGCCCCGGGGGTGAAGTCGCAGCTTCACTTACACCAGCTGCTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp ACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGAATGACAAAGAAGAGTaGAAGTCCGCTTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: TLWVSLAGAPFHSVARGGNDKEE*KSACHW
Trigger: CCAGTGACAAGCGGACTTCCACTCTTCTTTGTCATT...CCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp CACAGGCTTAGGACCATCCATCACACGAGCATTCCCACACGGGACCTAGGGCAGCGGACAGGTTGTCTCTaGTCAGGCTCCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HRLRTIHHTSIPTRDLGQRTGCL*SGSRCG
Trigger: GCCACAGCGGGAGCCTGACCAGAGACAACCTGTCCG...CTGCCCTAGGTCCCGTGTGGGAATGCTCGTGTGATGGATGGTCCTAAGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGTTTGAAGAACAAGGCTGGAGGTTTCCCGCGACAGCACCGGACCCCTGGCCAAGCAGCAGGGCATTCTTaGCGACGTCCCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: GLKNKAGGFPRQHRTPGQAAGHS*RRPCTG
Trigger: CCCTGTACAGGGACGTCGCCAAGAATGCCCTGCTGC...TTGGCCAGGGGTCCGGTGCTGTCGCGGGAAACCTCCAGCCTTGTTCTTCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GGCCTCTGCATGACAGCGCGCAGGGTGGGCCAGCAGAATGTCCCTCCTGCGTTGAGCTGTGACTTGGGATaGAACTGCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: GLCMTARRVGQQNVPPALSCDLG*NCSGDG
Trigger: CCCATCACCACTGCAGTTCCATCCCAAGTCACAGCT...CAACGCAGGAGGGACATTCTGCTGGCCCACCCTGCGCGCTGTCATGCAGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAGTGAAGACACAGGCCTaGGGGAATGGCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKVKTQA*GNGLCM
Trigger: CATGCAGAGGCCATTCCCCCAGGCCTGTGTCTTCAC...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp ATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGCAGGAAAGCCAATGATGGCAGGTaGGTGAAGACACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MAPPHPMEGMGGGRASRKANDGR*VKTQAW
Trigger: CCAGGCCTGTGTCTTCACCCACCTGCCATCATTGGC...TTTCCTGCTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGGTTGCTAACCCACCCAGAGCAGCGCTGGACAGATCCTAAGACGAAGGAGAGCGCCACCATGGGTCCCTaGACGGCTCTTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GLLTHPEQRWTDPKTKESATMGP*TALLSQ
Trigger: CTGGGAGAGAAGAGCCGTCCAGGGACCCATGGTGGC...GCTCTCCTTCGTCTTAGGATCTGTCCAGCGCTGCTCTGGGTGGGTTAGCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCTGCTCATCACAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCACTCCACCTCACCCTATaGAGGGCATGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VCSSQPSICLPALAPAKSLHLTL*RAWVVA
Trigger: GGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAG...TGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTGTGATGAGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GTCGAGCACCTCGGAAACACCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAAGGACGCACCACCATaGCTCCACCTCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: VEHLGNTLWVSLAGAPFHKDAPP*LHLTLW
Trigger: CCATAGGGTGAGGTGGAGCCATGGTGGTGCGTCCTT...GTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGGTGTTTCCGAGGTGCTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGCCTTGTCCTCCCACGTaGCACTGCCTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: AKPRHSARRGTLHPREAWPCPPT*HCLLHE
Trigger: CTCGTGGAGAAGGCAGTGCCACGTGGGAGGACAAGG...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CAGCCAAGTATCTGTCTCCCGGCCCTCGCACCCGCGAAATCAACATTCTCCCGTGGAGACGAGGGGACGTaGGGACGAGGTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: QPSICLPALAPAKSTFSRGDEGT*GRGDRT
Trigger: TGTCCTGTCACCTCGTCCCCACGTCCCCTCGTCTCC...ACGGGAGAATGTTGATTTCGCGGGTGCGAGGGCCGGGAGACAGATACTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375630.6
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TTGTTGTCAGAGGTACATGGTGACTATCTCCACACAGGCAGAGCTGGGACCCAAGGGGACGCCTGCGGCTaGCCCCTCGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLSEVHGDYLHTGRAGTQGDACG*PLGTEW
Trigger: CCACTCTGTCCCGAGGGGCCAGCCGCAGGCGTCCCC...TTGGGTCCCAGCTCTGCCTGTGTGGAGATAGTCACCATGTACCTCTGACAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGGGGAGACCGAAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTTGGACGGCACACGCGTGTCTGTaGTATGTGTACACGTGCATG +
Preference number: 4 (lower is better)
Translates to: WGDRNSASPNTQGRRAWTAHACL*YVYTCM
Trigger: CATGCACGTGTACACATACCACAGACACGCGTGTGC...CGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTTCGGTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp CCCTCTGGGTTTCACTTGCCGGAGCCCCGTTCCACAGCGTGGCGCGGGGCGGGCCTGGGAACTCATTTGTaGTGTACACATGAATGTGCA +
Preference number: 4 (lower is better)
Translates to: PSGFHLPEPRSTAWRGAGLGTHL*CTHECA
Trigger: TGCACATTCATGTGTACACCACAAATGAGTTCCCAG...GCCCGCCCCGCGCCACGCTGTGGAACGGGGCTCCGGCAAGTGAAACCCAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp TGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTTCGAGCCTGTGCGTGTTTaGGGTGTGTCCATGTGCATC +
Preference number: 4 (lower is better)
Translates to: CWDPPVSCVPPPSARDRFEPVRV*GVSMCI
Trigger: GATGCACATGGACACACCCCAAACACGCACAGGCTC...GAACCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGATGGAACTGCAGTGGTGATGGGAACCGCCGAGGATGGGTGGGGGCTCCGTGGCTGGGAGCTCGTTTGTaGTGTACACGTGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: GWNCSGDGNRRGWVGAPWLGARL*CTRVCM
Trigger: CATGCACACACGTGTACACCACAAACGAGCTCCCAG...CCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCACTGCAGTTCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GGATGCAGTGCAGGACACCAGGACAGTGTGCACTTGTTTGTGGCACATGTGTGTGCGGCCCTTCCCAGCTaGCTCGTGGCGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCSAGHQDSVHLFVAHVCAALPS*LVAEGW
Trigger: CCAGCCTTCCGCCACGAGCCAGCTGGGAAGGGCCGC...ACACACATGTGCCACAAACAAGTGCACACTGTCCTGGTGTCCTGCACTGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375630.6
ENST00000471555.5
ENST00000487903.5
CDS-3UTR CCA 90 bp GCAAAGCCCAGACATTCTGCCAGGAGGGGGACTCTTCATCCCAGGGAGGCATGGTCCCTCGAGACGGTGTaGCCTGCTTGTTCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: AKPRHSARRGTLHPREAWSLETV*PACSPC
Trigger: ACAGGGCGAACAAGCAGGCCACACCGTCTCGAGGGA...CCATGCCTCCCTGGGATGAAGAGTCCCCCTCCTGGCAGAATGTCTGGGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5
CDS-3UTR CCA 90 bp GCCTGTTGGGATCCACCCGTGTCCTGTGTGCCACCCCCGTCAGCCCGAGACAGGTGTGCGCACCCATTCTaGACTCTCTCTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ACWDPPVSCVPPPSARDRCAHPF*TLSVAV
Trigger: AACAGCAACAGAGAGAGTCCAGAATGGGTGCGCACA...CCTGTCTCGGGCTGACGGGGGTGGCACACAGGACACGGGTGGATCCCAACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000419631.1
3UTR CAA 72 bp CCCGGCCCTTCCCACAGCATCCGGATTGGAGGGTTGTaGAGTAAAGGACGCACCACCATGGCTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: PGPSHSIRIGGL*SKGRTTMAPPH
Trigger: GTGAGGTGGAGCCATGGTGGTGCGTCCTTTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
3UTR CAA 72 bp AAACTCAGCCAGCCCCAACACACAGGGCAGGCGGGCTaGGACGTAACCGCAGGGAAACCACTCCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: KLSQPQHTGQAG*DVTAGKPLPDE
Trigger: CTCATCTGGGAGTGGTTTCCCTGCGGTTACGTCCAAGCCCGCCTGCCCTGTGTGTTGGGGCTGGCTGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375630.6
ENST00000375645.7
ENST00000419631.1
ENST00000471555.5
ENST00000487903.5
CDS-3UTR TCA 90 bp CACCACCATGGCTCCACCTCACCCTATGGAGGGCATGGGTGGTGGCCGGGCAAGGCTTGCCGTGCTGAATaGAATGAACAGGACACTGGT +
Preference number: 4 (lower is better)
Translates to: HHHGSTSPYGGHGWWPGKACRAE*NEQDTG
Trigger: ACCAGTGTCCTGTTCATTTCATTCAGCACGGCAAGC...CTTGCCCGGCCACCACCCATGCCCTCCATAGGGTGAGGTGGAGCCATGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375630.6
ENST00000487903.5