RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP10D (Homo sapiens)

Ensembl gene IDs: ENSG00000145246

Ensembl transcript IDs: ENST00000273859.8, ENST00000503288.6, ENST00000504445.1, ENST00000507889.1, ENST00000512393.1

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTTCACTTTTCTGCAGCGGTGTGGCTCGGCAGCAGACCACAGCTTaGCACCAAGATGTCAGTTCCAGGAACTGCTTTTGCAGACTTTCT +
Preference number: 1 (lower is better)
Translates to: TSLFCSGVARQQTTA*HQDVSSRNCFCRLS
Trigger: AGAAAGTCTGCAAAAGCAGTTCCTGGAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTGCCGAGCCACACCGCTGCAGAAAAGTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 90 bp TCTCCAGACTTGCTCCATCTGGGGAAGCCACCGACAGTAACTCCATaGTCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGG +
Preference number: 1 (lower is better)
Translates to: SPDLLHLGKPPTVTP*SQNQRLSYTPQLDW
Trigger: CCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATCATGGAGTTACTGTCGGTGGCTTCCCCAGATGGAGCAAGTCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 90 bp ACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTaGGCTGATGTCTGCCTGACCTATGGCTTCAGTTTCCTAACTGAC +
Preference number: 1 (lower is better)
Translates to: TVSFKIQEITQWATG*ADVCLTYGFSFLTD
Trigger: GTCAGTTAGGAAACTGAAGCCATAGGTCAGGCAGACATCAGCTCAGCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR GCA 90 bp TTTCTGACCACTTCTGTAAAGTTCAGGCAGTTGCATGAGGGTCTCTaGAGACACATCTTTCTCCAAAACACCATAAATGACAGGAGGGGC +
Preference number: 1 (lower is better)
Translates to: FLTTSVKFRQLHEGL*RHIFLQNTINDRRG
Trigger: GCCCCTCCTGTCATTTATGGTGTTTTGGAGAAAGATGTGTCTGCAGAGACCCTCATGCAACTGCCTGAACTTTACAGAAGTGGTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 90 bp GAAGAACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTaGGGATACAAACTAAGTAGAATACTGGATCCAGCATGTGCTCCT +
Preference number: 1 (lower is better)
Translates to: EELCIQTWAEEQWTS*GYKLSRILDPACAP
Trigger: AGGAGCACATGCTGGATCCAGTATTCTACTTAGTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 90 bp TATACAGAGGCAGATCTCATAAAAGGTCTTCTCTTGATTGGAACCTaGCAGAGGAATGCATTCCTGGTCCCTGATGAAACCCTAGAATCC +
Preference number: 1 (lower is better)
Translates to: YTEADLIKGLLLIGT*QRNAFLVPDETLES
Trigger: GGATTCTAGGGTTTCATCAGGGACCAGGAATGCATTCCTCTGTCAGGTTCCAATCAAGAGAAGACCTTTTATGAGATCTGCCTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR TCA 90 bp GCACAAAGAAGCAGACCAGGCTTTGATAAAAAGCATCCAATAAGGTaGTCCAGAAGGTATGGGGTAAGTATGCCTCTGATTTCTGACCAC +
Preference number: 1 (lower is better)
Translates to: AQRSRPGFDKKHPIR*SRRYGVSMPLISDH
Trigger: GTGGTCAGAAATCAGAGGCATACTTACCCCATACCTTCTGGATCACCTTATTGGATGCTTTTTATCAAAGCCTGGTCTGCTTCTTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR GCA 90 bp CTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTaGTTATCTGACTACGAGATAACTCTGGTAAGCTTTGCTGGTTCT +
Preference number: 1 (lower is better)
Translates to: LQCTTWPMNVPINYT*LSDYEITLVSFAGS
Trigger: AGAACCAGCAAAGCTTACCAGAGTTATCTCGTAGTCAGATAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
3UTR-3UTR GCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAAACCACTTCACTTTTCTaGAGCGGTGTGGCTCGGCAG +
Preference number: 2 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKTTSLF*SGVARQ
Trigger: CTGCCGAGCCACACCGCTGCAGAAAAGTGAAGTGGT...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR GCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAACCATCACAGCCTGCATaGCTTCTTGACCTGAGACCC +
Preference number: 2 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKPSQPA*LLDLRP
Trigger: GGGTCTCAGGTCAAGAAGGCATGCAGGCTGTGATGG...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CAA 90 bp CACTTCACTTTTCTGCAGCGGTGTGGCTCGGCAGCAGACCACAGCTaGACACCAAGATGTCAGTTCCAGGAACTGCTTTTGCAGACTTTC +
Preference number: 2 (lower is better)
Translates to: HFTFLQRCGSAADHS*TPRCQFQELLLQTF
Trigger: GAAAGTCTGCAAAAGCAGTTCCTGGAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTGCCGAGCCACACCGCTGCAGAAAAGTGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CAA 90 bp GCAGACCACAGCTTGACACCAAGATGTCAGTTCCAGGAACTGCTTTaGCAGACTTTCTTGCAGGGCAAACTCCAGGGTCTTCCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: ADHSLTPRCQFQELL*QTFLQGKLQGLPSD
Trigger: ATCACTGGGAAGACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAAGCAGTTCCTGGAACTGACATCTTGGTGTCAAGCTGTGGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAACTCTTGATTGGAACCTaGCAGAGGAATGCATTCCTG +
Preference number: 2 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKLLIGT*QRNAFL
Trigger: CAGGAATGCATTCCTCTGTCAGGTTCCAATCAAGAG...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAAGAAGGAAATTCTGGATaGCTGGTGGCTGACAACTTT +
Preference number: 2 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKEGNSG*LVADNF
Trigger: AAAGTTGTCAGCCACCAGTCATCCAGAATTTCCTTC...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGCAGCAGACCACAGCTTaGCACCAAGATGTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWQQTTA*HQDVSS
Trigger: GGAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTG...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAACTGAGATGTTTGAACTaGGAAACGGCAAAGTCACTG +
Preference number: 2 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKLRCLN*ETAKSL
Trigger: CAGTGACTTTGCCGTTTCTCAGTTCAAACATCTCAG...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGGATGGAGGAGAACGATaGACAGAGCGGCTGTGTTCA +
Preference number: 2 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWDGGER*TERLCS
Trigger: TGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATC...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAATACGAAGGCCTTGTTTaGCATAGTCATCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKYEGLV*HSHPSA
Trigger: AGCACTTGGATGACTATGCCAAACAAGGCCTTCGTA...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CAA 90 bp TTGACACCAAGATGTCAGTTCCAGGAACTGCTTTTGCAGACTTTCTaGCAGGGCAAACTCCAGGGTCTTCCCAGTGATAATGAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: LTPRCQFQELLLQTF*QGKLQGLPSDNESS
Trigger: GCTGGACTCATTATCACTGGGAAGACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAAGCAGTTCCTGGAACTGACATCTTGGTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAATTGATGCCCGCTTTGTaGAGAGCTTCTATAGATTCA +
Preference number: 2 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKLMPAL*RASIDS
Trigger: TGAATCTATAGAAGCTCTTCACAAAGCGGGCATCAA...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGTCATCACCTGGAGATaGCTGCGGACCAATTTCACC +
Preference number: 2 (lower is better)
Translates to: DQATVSFKIQEITQWATGVITWR*LRTNFT
Trigger: GGTGAAATTGGTCCGCAGCCATCTCCAGGTGATGAC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGGCCACAGGCTGAGCTaGTGTCTGCCTGACCTATGG +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVGHRLS*CLPDLW
Trigger: CCATAGGTCAGGCAGACATCAGCTCAGCCTGTGGCC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR GCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGTTTTGCAGACTTTCTTaGAGGGCAAACTCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: IAQELADFIANTAEGPGMFCRLS*RANSRV
Trigger: GACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAA...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGCTCTGTATACAAACCTaGGCAGAAGAGCAATGGACG +
Preference number: 2 (lower is better)
Translates to: IAQELADFIANTAEGPGMLCIQT*AEEQWT
Trigger: CGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAG...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGAGCTGATGTCTGCCTaGCCTATGGCTTCAGTTTCC +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWELMSA*PMASVS
Trigger: GGAAACTGAAGCCATAGGTCAGGCAGACATCAGCTC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAATTGATTGTATCACTTTaGTCAGGCTACTGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKLIVSL*SGYCQF
Trigger: AAACTGACAGTAGCCTGATCAAAGTGATACAATCAA...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGTATACACCACAACTTaGTTGGAAAGAGGGTGTCGG +
Preference number: 2 (lower is better)
Translates to: DQATVSFKIQEITQWATGVYTTT*LERGCR
Trigger: CCGACACCCTCTTTCCAATCAAGTTGTGGTGTATAC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCATTCCGACTGGAGCCTaGCCATTTAAAGCATTTCCC +
Preference number: 2 (lower is better)
Translates to: KAPPQENIEMSERYAYIFIPTGA*PFKAFP
Trigger: GGGAAATGCTTTAAATGGTCAGGCTCCAGTCGGAAT...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGAAGGAAATTCTGGATaGCTGGTGGCTGACAACTTT +
Preference number: 2 (lower is better)
Translates to: DQATVSFKIQEITQWATGEGNSG*LVADNF
Trigger: AAAGTTGTCAGCCACCAGTCATCCAGAATTTCCTTC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCCGACAGTAACTCCATaGTCACAGAATCAGCGCCTT +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWPTVTP*SQNQRL
Trigger: AAGGCGCTGATTCTGTGATCATGGAGTTACTGTCGG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCAACTCTTGCTTTCAATaGCCAGATGGAGGAGAACGA +
Preference number: 2 (lower is better)
Translates to: DQATVSFKIQEITQWATGNSCFQ*PDGGER
Trigger: TCGTTCTCCTCCATCTGGTCATTGAAAGCAAGAGTT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR GCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACCCCTATCCCAATGTCTaGCACTTGTATCATGCTAAC +
Preference number: 2 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNPYPNV*HLYHAN
Trigger: GTTAGCATGATACAAGTGGCAGACATTGGGATAGGG...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGCAAGGGTCATCACCTaGAGATGGCTGCGGACCAAT +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVARVIT*RWLRTN
Trigger: ATTGGTCCGCAGCCATCTCCAGGTGATGACCCTTGC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGCCCAGTAATCAGTCATaGATGTTCCTGAAAATCCAC +
Preference number: 2 (lower is better)
Translates to: IAQELADFIANTAEGPGMPSNQS*MFLKIH
Trigger: GTGGATTTTCAGGAACATCCATGACTGATTACTGGG...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACGTGATCCAGAAGGTATaGGGTAAGTATGCCTCTGAT +
Preference number: 2 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNVIQKV*GKYASD
Trigger: ATCAGAGGCATACTTACCCCATACCTTCTGGATCAC...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CAA 90 bp CCTTCTGGAGCCAGGAATAGGGAAAAACCACAAGTTTGGTGGGATTaGGGAGATTACAGAGCAATAAAAAGGCCTTCAATGTACCACATG +
Preference number: 2 (lower is better)
Translates to: PSGARNREKPQVWWD*GDYRAIKRPSMYHM
Trigger: CATGTGGTACATTGAAGGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCCCTATTCCTGGCTCCAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
3UTR-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCTCTTGATTGGAACCTaGCAGAGGAATGCATTCCTG +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWLLIGT*QRNAFL
Trigger: CAGGAATGCATTCCTCTGTCAGGTTCCAATCAAGAG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAGAGGCTCCAACACCTaGAAAGTCTCAGGGTATTGT +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWRGSNT*KVSGYC
Trigger: ACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR TCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAATCAGCATCCAGATCTTaGTGCCCGCTTTGTGAAGAG +
Preference number: 2 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKSASRS*CPLCEE
Trigger: CTCTTCACAAAGCGGGCATCAAGATCTGGATGCTGA...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGAGTCATGGATGTTCCTaGAAATCCACAAAAGAACTG +
Preference number: 2 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWSHGCS*KSTKEL
Trigger: CAGTTCTTTTGTGGATTTTCAGGAACATCCATGACT...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCATTCCTCAGCCACTCTaGATATTCAGTGTCACTCAT +
Preference number: 2 (lower is better)
Translates to: DQATVSFKIQEITQWATGIPQPL*IFSVTH
Trigger: ATGAGTGACACTGAATATGCAGAGTGGCTGAGGAAT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGATGCATAAGCTATGTTaGCAGCTGTCTCCTGCTTGT +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWMHKLC*QLSPAC
Trigger: ACAAGCAGGAGACAGCTGTCAACATAGCTTATGCAT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACAAAGATGTCAGTATCTaGGCCCTGGTAGGTAAAATA +
Preference number: 2 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNKDVSI*ALVGKI
Trigger: TATTTTACCTACCAGGGCTCAGATACTGACATCTTT...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCTCTAAGAGTGAGCCATaGTTCTTAAACCAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: GKTTSLVGFGRLQSNKKASKSEP*FLNQGS
Trigger: GCTGCCTTGGTTTAAGAATCATGGCTCACTCTTAGA...GGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
3UTR-3UTR GCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGAAAACAAGTCATTCTTaGTTGGAGAGATACCTCTTC +
Preference number: 2 (lower is better)
Translates to: IAQELADFIANTAEGPGMKTSHS*LERYLF
Trigger: GAAGAGGTATCTCTCCAAGCAAGAATGACTTGTTTT...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR GCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTTGTTTCTCCAGACTTaGTCCATCTGGGGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVLFLQT*SIWGSH
Trigger: GTGGCTTCCCCAGATGGAGCAAGTCTGGAGAAACAA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR GCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTCACCTGGAGATGGCTaGGGACCAATTTCACCACTT +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVSPGDG*GPISPL
Trigger: AAGTGGTGAAATTGGTCCGCAGCCATCTCCAGGTGA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGTTAGTCTGTCAAAGTaGTTAGCTCTCAGAATTGGA +
Preference number: 2 (lower is better)
Translates to: DQATVSFKIQEITQWATGVSLSK*LALRIG
Trigger: TCCAATTCTGAGAGCTAAGCACTTTGACAGACTAAC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAGGTCTTCTCTTGATTaGAACCTGACAGAGGAATGC +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWRSSLD*NLTEEC
Trigger: GCATTCCTCTGTCAGGTTCCAATCAAGAGAAGACCT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGCAGGCATCTTTACTTTaGGTATTGAGGATAAAAAGC +
Preference number: 2 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWQASLL*VLRIKS
Trigger: GCTTTTTATCCTCAATACCCAAAGTAAAGATGCCTG...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTAGAGGCTCCAACACCTaGAAAGTCTCAGGGTATTGT +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVRGSNT*KVSGYC
Trigger: ACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCGGGGGACAGGAGGCTaGAGTAAATCTTCACTTAAT +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVRGTGG*SKSSLN
Trigger: ATTAAGTGAAGATTTACTTCAGCCTCCTGTCCCCCG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR GCA 90 bp GGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCGTGATCTTGCTGAGCTaGAATCATGTAGTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: GKTTSLVGFGRLQSNKKAVILLS*NHVVSS
Trigger: AGAAGAGACTACATGATTGCAGCTCAGCAAGATCAC...GGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
3UTR-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCAGTTTTCAGAGGTTTaGAGATTTTGGAATTGTGGA +
Preference number: 2 (lower is better)
Translates to: DQATVSFKIQEITQWATGQFSEV*RFWNCG
Trigger: TCCACAATTCCAAAATCTCCAAACCTCTGAAAACTG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273859.8
3UTR-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTACACCACAACTTGATTaGAAAGAGGGTGTCGGACCA +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVTPQLD*KEGVGP
Trigger: TGGTCCGACACCCTCTTTCCAATCAAGTTGTGGTGT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp ATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTCTTCAATGTACCACATaGCCTATGAATGTCCCTATA +
Preference number: 2 (lower is better)
Translates to: MDVTRQFLTLPTGTHEHILQCTT*PMNVPI
Trigger: TATAGGGACATTCATAGGCCATGTGGTACATTGAAG...AATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
3UTR CAA 90 bp CATTCTTGCTTGGAGAGATACCTCTTCAAAATCCCTCTTCCAACCTaGAAAGAATACTTGCAACTCCAAGGAGGGTATCTAGCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: HSCLERYLFKIPLPT*KEYLQLQGGYLAFF
Trigger: AAAGAAAGCTAGATACCCTCCTTGGAGTTGCAAGTATTCTTTCAAGGTTGGAAGAGGGATTTTGAAGAGGTATCTCTCCAAGCAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CAA 90 bp AGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTCTGTaGAGCTCTGAAATTGATATATTAGAAAATGACCTTCTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: RQFLTLPTGTHEHIL*SSEIDILENDLLEP
Trigger: TGGCTCCAGAAGGTCATTTTCTAATATATCAATTTCAGAGCTCAACAGAATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
3UTR-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAGGAAAACATTGAAATaGGTGAGAGGTATGCCTACA +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWRKTLK*VRGMPT
Trigger: TGTAGGCATACCTCTCACTCATTTCAATGTTTTCCT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR GCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGTCAGTTCCAGGAACTaGTTTTGCAGACTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVVSSRN*FCRLSC
Trigger: GCAAGAAAGTCTGCAAAAGCAGTTCCTGGAACTGAC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp CTATACATAAAGTACGAAGGCCTTGTTTGGCATAGTCATCCAAGTGCTTCTGGGCAAGTCATTCTTGCTTaGAGAGATACCTCTTCAAAA +
Preference number: 2 (lower is better)
Translates to: LYIKYEGLVWHSHPSASGQVILA*RDTSSK
Trigger: TTTTGAAGAGGTATCTCTCCAAGCAAGAATGACTTG...CCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAATCCACAAAAGAACTaGTACCAGAAAAGGAGGTTC +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWNPQKN*YQKRRF
Trigger: GAACCTCCTTTTCTGGTACCAGTTCTTTTGTGGATT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGTTGATTGTATCACTTTaGTCAGGCTACTGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWLIVSL*SGYCQF
Trigger: AAACTGACAGTAGCCTGATCAAAGTGATACAATCAA...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR GCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAAAACAAGTCATTCTTaGTTGGAGAGATACCTCTTC +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWKTSHS*LERYLF
Trigger: GAAGAGGTATCTCTCCAAGCAAGAATGACTTGTTTT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCAAGTCATTCTTGCTTaGAGAGATACCTCTTCAAAA +
Preference number: 2 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWQVILA*RDTSSK
Trigger: TTTTGAAGAGGTATCTCTCCAAGCAAGAATGACTTG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAAGAAATTCTGGATGACTaGTGGCTGACAACTTTCAAA +
Preference number: 2 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKEILDD*WLTTFK
Trigger: TTTGAAAGTTGTCAGCCACCAGTCATCCAGAATTTC...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAATGGATGACTGGTGGCTaGCAACTTTCAAATATAATA +
Preference number: 2 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKWMTGG*QLSNII
Trigger: TATTATATTTGAAAGTTGTCAGCCACCAGTCATCCA...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR GCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCCAAGCCTAGTAAAATaGTCATGTCCCTTATGGAAA +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVPSLVK*SCPLWK
Trigger: TTTCCATAAGGGACATGAGCATTTTACTAGGCTTGG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAATTGCATGAGGGTCTCTaGAGACACATCTTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKLHEGL*RHIFLQ
Trigger: TTGGAGAAAGATGTGTCTGCAGAGACCCTCATGCAA...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAAGGTCTTCTCTTGATTaGAACCTGACAGAGGAATGC +
Preference number: 2 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKRSSLD*NLTEEC
Trigger: GCATTCCTCTGTCAGGTTCCAATCAAGAGAAGACCT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAACCTTCAAGTGGTCTCTaGAAGATTGTTTTGAAATTG +
Preference number: 2 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKPSSGL*KIVLKL
Trigger: CAATTTCAAAACAATCTTCCAGAGACCACTTGAAGG...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTAGCTATGTGAGATTTTaGAAGTTCTCGAAATCAGCT +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVSYVRF*KFSKSA
Trigger: AGCTGATTTCGAGAACTTTCAAAATCTCACATAGCT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGTTCTTTCAAAATTGTaGTCATCAGCATCCCACAGG +
Preference number: 2 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKVLSKL*SSASHR
Trigger: CCTGTGGGATGCTGATGAGCACAATTTTGAAAGAAC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTGCTCATGTCCCTTATaGAAAAACAAGTCATTCTTG +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVCSCPL*KNKSFL
Trigger: CAAGAATGACTTGTTTTTCCATAAGGGACATGAGCA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCCTTCAAGTGGTCTCTaGAAGATTGTTTTGAAATTG +
Preference number: 2 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVPSSGL*KIVLKL
Trigger: CAATTTCAAAACAATCTTCCAGAGACCACTTGAAGG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCAAGCCTAGTAAAATaGTCATGTCCCTTATGGAAA +
Preference number: 2 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPSLVK*SCPLWK
Trigger: TTTCCATAAGGGACATGAGCATTTTACTAGGCTTGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGAAATTCTGGATGACTaGTGGCTGACAACTTTCAAA +
Preference number: 2 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKEILDD*WLTTFK
Trigger: TTTGAAAGTTGTCAGCCACCAGTCATCCAGAATTTC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGAGGTTTGGAGATTTTaGAATTGTGGATATGAGATT +
Preference number: 2 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKEVWRF*NCGYEI
Trigger: AATCTCATATCCACAATTCCAAAATCTCCAAACCTC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273859.8
3UTR TCA 72 bp CCAGCTCGTAACCCTGAGTCCCGGGGGACAGGAGGCTaGAGTAAATCTTCACTTAATGACACTTGCTCTGGC +
Preference number: 3 (lower is better)
Translates to: PARNPESRGTGG*SKSSLNDTCSG
Trigger: GCCAGAGCAAGTGTCATTAAGTGAAGATTTACTTCAGCCTCCTGTCCCCCGGGACTCAGGGTTACGAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 72 bp TCCCCTGTCAGCATCCAGATCTTGATGCCCGCTTTGTaGAGAGCTTCTATAGATTCAGGGACTCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: SPVSIQILMPAL*RASIDSGTPSC
Trigger: GCAGGAGGGAGTCCCTGAATCTATAGAAGCTCTTCACAAAGCGGGCATCAAGATCTGGATGCTGACAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAACGTATACACCACAACTaGATTGGAAAGAGGGTGTCG +
Preference number: 3 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKRIHHN*IGKRVS
Trigger: CGACACCCTCTTTCCAATCAAGTTGTGGTGTATACG...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAATTGCTCTGGCAGGGCTaGAGTTTTCTTCTGAAGTTC +
Preference number: 3 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKLLWQG*SFLLKF
Trigger: GAACTTCAGAAGAAAACTCAAGCCCTGCCAGAGCAA...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CCA 72 bp GCACCATCACCAATAGCAAGGGTCATCACCTGGAGATaGCTGCGGACCAATTTCACCACTTCACTTTTCTGC +
Preference number: 3 (lower is better)
Translates to: APSPIARVITWR*LRTNFTTSLFC
Trigger: GCAGAAAAGTGAAGTGGTGAAATTGGTCCGCAGCCATCTCCAGGTGATGACCCTTGCTATTGGTGATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 72 bp TTGCTCCATCTGGGGAAGCCACCGACAGTAACTCCATaGTCACAGAATCAGCGCCTTTCGTATACACCACAA +
Preference number: 3 (lower is better)
Translates to: LLHLGKPPTVTP*SQNQRLSYTPQ
Trigger: TTGTGGTGTATACGAAAGGCGCTGATTCTGTGATCATGGAGTTACTGTCGGTGGCTTCCCCAGATGGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CCA 72 bp TCATTGGCACCATCACCAATAGCAAGGGTCATCACCTaGAGATGGCTGCGGACCAATTTCACCACTTCACTT +
Preference number: 3 (lower is better)
Translates to: SLAPSPIARVIT*RWLRTNFTTSL
Trigger: AAGTGAAGTGGTGAAATTGGTCCGCAGCCATCTCCAGGTGATGACCCTTGCTATTGGTGATGGTGCCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAAACCTTGAAAGAATACTaGCAACTCCAAGGAGGGTAT +
Preference number: 3 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKTLKEY*QLQGGY
Trigger: ATACCCTCCTTGGAGTTGCAAGTATTCTTTCAAGGT...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACGTTGTTTCTCCAGACTaGCTCCATCTGGGGAAGCCA +
Preference number: 3 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNVVSPD*LHLGKP
Trigger: TGGCTTCCCCAGATGGAGCAAGTCTGGAGAAACAAC...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGCAGCAGACCACAGCTaGACACCAAGATGTCAGTTC +
Preference number: 3 (lower is better)
Translates to: DQATVSFKIQEITQWATGAADHS*TPRCQF
Trigger: GAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTGC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR GCA 72 bp GATGTCAGTTCCAGGAACTGCTTTTGCAGACTTTCTTaGAGGGCAAACTCCAGGGTCTTCCCAGTGATAATG +
Preference number: 3 (lower is better)
Translates to: DVSSRNCFCRLS*RANSRVFPVIM
Trigger: CATTATCACTGGGAAGACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAAGCAGTTCCTGGAACTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGCCTTACTATCATCTGTaGTTTCTCCAGACTTGCTCC +
Preference number: 3 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWPYYHL*FLQTCS
Trigger: GGAGCAAGTCTGGAGAAACAACAGATGATAGTAAGG...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 72 bp TTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTaGGCTGATGTCTGCCTGACCTATGGCTTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: FKIQEITQWATG*ADVCLTYGFSF
Trigger: GAAACTGAAGCCATAGGTCAGGCAGACATCAGCTCAGCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR TCA 72 bp ACTCTGGTAAGCTTTGCTGGTTCTAAGAGTGAGCCATaGTTCTTAAACCAAGGCAGCCTTCTTCAGGCTCAC +
Preference number: 3 (lower is better)
Translates to: TLVSFAGSKSEP*FLNQGSLLQAH
Trigger: GTGAGCCTGAAGAAGGCTGCCTTGGTTTAAGAATCATGGCTCACTCTTAGAACCAGCAAAGCTTACCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
3UTR-3UTR CAA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGCCAAGTAATGTAAGTTaGTTCTCCAACCTCATGGCA +
Preference number: 3 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWPSNVS*FSNLMA
Trigger: TGCCATGAGGTTGGAGAACAAACTTACATTACTTGG...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCTTTTGCAGACTTTCTaGCAGGGCAAACTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWLLQTF*QGKLQG
Trigger: ACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAAG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGCCCCTCTCCACTTCTaGAGAGCTTTAGTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVAPLHF*RALVLS
Trigger: GGAGAGGACTAAAGCTCTCAAGAAGTGGAGAGGGGC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 72 bp GCAGATCTCATAAAAGGTCTTCTCTTGATTGGAACCTaGCAGAGGAATGCATTCCTGGTCCCTGATGAAACC +
Preference number: 3 (lower is better)
Translates to: ADLIKGLLLIGT*QRNAFLVPDET
Trigger: GGTTTCATCAGGGACCAGGAATGCATTCCTCTGTCAGGTTCCAATCAAGAGAAGACCTTTTATGAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR TCA 72 bp ATCACAGAATCAGCGCCTTTCGTATACACCACAACTTaGTTGGAAAGAGGGTGTCGGACCACAACAGACATT +
Preference number: 3 (lower is better)
Translates to: ITESAPFVYTTT*LERGCRTTTDI
Trigger: AATGTCTGTTGTGGTCCGACACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CCA 72 bp CAGAATCAGCGCCTTTCGTATACACCACAACTTGATTaGAAAGAGGGTGTCGGACCACAACAGACATTCTTT +
Preference number: 3 (lower is better)
Translates to: QNQRLSYTPQLD*KEGVGPQQTFF
Trigger: AAAGAATGTCTGTTGTGGTCCGACACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGAAGTTCTTTCAAAATaGTGCTCATCAGCATCCCAC +
Preference number: 3 (lower is better)
Translates to: DQATVSFKIQEITQWATGEVLSK*CSSASH
Trigger: GTGGGATGCTGATGAGCACAATTTTGAAAGAACTTC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACCCCAATGTCTGCCACTaGTATCATGCTAACATCATT +
Preference number: 3 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNPNVCH*YHANII
Trigger: AATGATGTTAGCATGATACAAGTGGCAGACATTGGG...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAAGTAAAGTTCAGGCAGTaGCATGAGGGTCTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKVKFRQ*HEGLCR
Trigger: TCTGCAGAGACCCTCATGCAACTGCCTGAACTTTAC...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCATCCAAGTCAAACTCTaGCTTTCAATGACCAGATGG +
Preference number: 3 (lower is better)
Translates to: DQATVSFKIQEITQWATGIQVKL*LSMTRW
Trigger: CCATCTGGTCATTGAAAGCAAGAGTTTGACTTGGAT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 72 bp GTTCAGGGGGTTTCCAAATGCAAAGATGTCAGTATCTaGGCCCTGGTAGGTAAAATAAGGCACAAAGAAGCA +
Preference number: 3 (lower is better)
Translates to: VQGVSKCKDVSI*ALVGKIRHKEA
Trigger: TGCTTCTTTGTGCCTTATTTTACCTACCAGGGCTCAGATACTGACATCTTTGCATTTGGAAACCCCCTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR TCA 72 bp TGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTaGGGATACAAACTAAGTAGAATACTGGATCCAGCA +
Preference number: 3 (lower is better)
Translates to: CIQTWAEEQWTS*GYKLSRILDPA
Trigger: TGCTGGATCCAGTATTCTACTTAGTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CCA 72 bp CCTTCTTTGCTATACATAAAGTACGAAGGCCTTGTTTaGCATAGTCATCCAAGTGCTTCTGGGTTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: PSLLYIKYEGLV*HSHPSASGFSP
Trigger: GGGAGAAAACCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAGCAAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCAGTAATTCTTCCCTGTaGTCAATGCTGGTTTCAGCT +
Preference number: 3 (lower is better)
Translates to: KAPPQENIEMSERYAYIFSNSSL*SMLVSA
Trigger: AGCTGAAACCAGCATTGACAACAGGGAAGAATTACT...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR GCA 72 bp ACTTCTGTAAAGTTCAGGCAGTTGCATGAGGGTCTCTaGAGACACATCTTTCTCCAAAACACCATAAATGAC +
Preference number: 3 (lower is better)
Translates to: TSVKFRQLHEGL*RHIFLQNTIND
Trigger: GTCATTTATGGTGTTTTGGAGAAAGATGTGTCTGCAGAGACCCTCATGCAACTGCCTGAACTTTACAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCACAAGTCATTCTTGCTaGGAGAGATACCTCTTCAAA +
Preference number: 3 (lower is better)
Translates to: KAPPQENIEMSERYAYIFTSHSC*ERYLFK
Trigger: TTTGAAGAGGTATCTCTCCAAGCAAGAATGACTTGT...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CAA 90 bp CTATACATAAAGTACGAAGGCCTTGTTTGGCATAGTCATCCAAGTGCTTCTGGGACAAGTCATTCTTGCTaGGAGAGATACCTCTTCAAA +
Preference number: 3 (lower is better)
Translates to: LYIKYEGLVWHSHPSASGTSHSC*ERYLFK
Trigger: TTTGAAGAGGTATCTCTCCAAGCAAGAATGACTTGT...CCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACCCTATTTTAGGTACCTaGTTGTTTAAAAGGCTCTTG +
Preference number: 3 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNPILGT*LFKRLL
Trigger: CAAGAGCCTTTTAAACAACAAGGTACCTAAAATAGG...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTACCTTGAAAGAATACTaGCAACTCCAAGGAGGGTAT +
Preference number: 3 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVTLKEY*QLQGGY
Trigger: ATACCCTCCTTGGAGTTGCAAGTATTCTTTCAAGGT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CAA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAAATTGATTGTATCACTTaGATCAGGCTACTGTCAGTT +
Preference number: 3 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKIDCIT*IRLLSV
Trigger: AACTGACAGTAGCCTGATCAAAGTGATACAATCAAT...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAAACAGGCATCTTTACTTaGGGTATTGAGGATAAAAAG +
Preference number: 3 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKTGIFT*GIEDKK
Trigger: CTTTTTATCCTCAATACCCAAAGTAAAGATGCCTGT...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTAAAAACAAGTCATTCTaGCTTGGAGAGATACCTCTT +
Preference number: 3 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVKNKSF*LGEIPL
Trigger: AAGAGGTATCTCTCCAAGCAAGAATGACTTGTTTTT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTATTTTAGGTACCTTGTaGTTTAAAAGGCTCTTGGGA +
Preference number: 3 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVILGTL*FKRLLG
Trigger: TCCCAAGAGCCTTTTAAACAACAAGGTACCTAAAAT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTATTGATTGTATCACTTaGATCAGGCTACTGTCAGTT +
Preference number: 3 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVIDCIT*IRLLSV
Trigger: AACTGACAGTAGCCTGATCAAAGTGATACAATCAAT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAATTGTGGATATGAGATaGTGGCCCTGTAACATTAGC +
Preference number: 3 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKIVDMR*WPCNIS
Trigger: GCTAATGTTACAGGGCCACAATCTCATATCCACAAT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273859.8
3UTR-3UTR CAA 90 bp TCTGAAATTGATATATTAGAAAATGACCTTCTGGAGCCAGGAATAGGGAAAAACTTCTCTCATCATACATaGTGGATGTGCAAGACTCTA +
Preference number: 3 (lower is better)
Translates to: SEIDILENDLLEPGIGKNFSHHT*WMCKTL
Trigger: TAGAGTCTTGCACATCCACAATGTATGATGAGAGAA...GTTTTTCCCTATTCCTGGCTCCAGAAGGTCATTTTCTAATATATCAATTTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504445.1
3UTR-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAATTTTAGGTACCTTGTaGTTTAAAAGGCTCTTGGGA +
Preference number: 3 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKILGTL*FKRLLG
Trigger: TCCCAAGAGCCTTTTAAACAACAAGGTACCTAAAAT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCTATTTTAGGTACCTaGTTGTTTAAAAGGCTCTTG +
Preference number: 3 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPILGT*LFKRLL
Trigger: CAAGAGCCTTTTAAACAACAAGGTACCTAAAATAGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR TCA 72 bp TCTGTTTATATCTCATATTTTAGAGGCTCCAACACCTaGAAAGTCTCAGGGTATTGTAAAAACTATGAACCT +
Preference number: 3 (lower is better)
Translates to: SVYISYFRGSNT*KVSGYCKNYEP
Trigger: AGGTTCATAGTTTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATATAAACAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
3UTR TCA 72 bp AAGCAGAAAGCAACTTCCATTAGCTATGTGAGATTTTaGAAGTTCTCGAAATCAGCTTATGTAAGAGACTAT +
Preference number: 3 (lower is better)
Translates to: KQKATSISYVRF*KFSKSAYVRDY
Trigger: ATAGTCTCTTACATAAGCTGATTTCGAGAACTTTCAAAATCTCACATAGCTAATGGAAGTTGCTTTCTGCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTCTCCCAAACTCAGCTaGGGGAGCCAGCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGSPKLS*GSQRRS
Trigger: GCTCCGGCGCTGGCTCCCGCAGCTGAGTTTGGGAGA...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
3UTR CAA 72 bp TTTCTGCAGCGGTGTGGCTCGGCAGCAGACCACAGCTaGACACCAAGATGTCAGTTCCAGGAACTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FLQRCGSAADHS*TPRCQFQELLL
Trigger: CAAAAGCAGTTCCTGGAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTGCCGAGCCACACCGCTGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGGGCCACAGGCTGAGCTaGTGTCTGCCTGACCTATGG +
Preference number: 4 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWGHRLS*CLPDLW
Trigger: CCATAGGTCAGGCAGACATCAGCTCAGCCTGTGGCC...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCCGCCGGAGCCTGTGCTaGGCTCGCAACCTACTTCTC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFRRSLC*ARNLLL
Trigger: GAGAAGTAGGTTGCGAGCTCAGCACAGGCTCCGGCG...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGGCCTGCATGCCTTCTTaGCCTGAGACCCCTATCCCA +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMACMPS*PETPIP
Trigger: TGGGATAGGGGTCTCAGGTCAAGAAGGCATGCAGGC...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTTCTGTGCAGCAAGCTaGGCTACTGGAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGFCAAS*ATGALG
Trigger: CCCCAGTGCTCCAGTAGCTCAGCTTGCTGCACAGAA...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCAGCAAAGTCCACCATaGCCTGCTCTGGTGTCCGAG +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGQQSPP*PALVSE
Trigger: CTCGGACACCAGAGCAGGTCATGGTGGACTTTGCTG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGGCCACAGGCTGAGCTaGTGTCTGCCTGACCTATGG +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFGHRLS*CLPDLW
Trigger: CCATAGGTCAGGCAGACATCAGCTCAGCCTGTGGCC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCCAATGGGCCACAGGCTaGGCTGATGTCTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFQWATG*ADVCLT
Trigger: GGTCAGGCAGACATCAGCTCAGCCTGTGGCCCATTG...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGACCACTTCACTTTTCTaGAGCGGTGTGGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWTTSLF*SGVARQ
Trigger: CTGCCGAGCCACACCGCTGCAGAAAAGTGAAGTGGT...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGAGCTACTGGAGCACTaGGGGCTCTCACACACCTGG +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFELLEH*GLSHTW
Trigger: CCAGGTGTGTGAGAGCCCCCAGTGCTCCAGTAGCTC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCAGCAAGCTGAGCTACTaGAGCACTGGGGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGSKLSY*STGGSH
Trigger: GTGAGAGCCCCCAGTGCTCCAGTAGCTCAGCTTGCT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTACGCCGGAGCCTGTGCTaGGCTCGCAACCTACTTCTC +
Preference number: 4 (lower is better)
Translates to: GLQCTTWPMNVPINYTCLRRSLC*ARNLLL
Trigger: GAGAAGTAGGTTGCGAGCTCAGCACAGGCTCCGGCG...TAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTCCAGGTTGTGTAGCTaGCCAATTCCTCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGSRLCS*PIPPSA
Trigger: TGCCGAGGGAGGAATTGGTCAGCTACACAACCTGGA...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCCATGTCTGCAGGGATaGCCTCGTTGCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWPCLQG*PRCRRG
Trigger: GCCTCTCCTGCAACGAGGTCATCCCTGCAGACATGG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGCAGCAGACCACAGCTTaGCACCAAGATGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMQQTTA*HQDVSS
Trigger: GGAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTG...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAAGAGCAATGGACGTCGTaGGGATACAAACTAAGTAGA +
Preference number: 4 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKEQWTS*GYKLSR
Trigger: TCTACTTAGTTTGTATCCTCACGACGTCCATTGCTC...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACCAGCAAAGTCCACCATaGCCTGCTCTGGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNQQSPP*PALVSG
Trigger: ACCAGACACCAGAGCAGGTCATGGTGGACTTTGCTG...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGGGGGCTCTCGGTTTTaGCATATTGCTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGGGSRF*HIAEGT
Trigger: GGTTCCCTCAGCAATATGGCAAAACCGAGAGCCCCC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGCATTATGAACTGTCCTaGAGCTGGGGGCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMHYELS*SWGLSV
Trigger: AACCGAGAGCCCCCAGCTGCAGGACAGTTCATAATG...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTCCGAGACCGTAAAGTaGATTGGTAAGCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGSETVK*IGKPWR
Trigger: CCGCCAGGGCTTACCAATGCACTTTACGGTCTCGGA...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCAAGTCCACCATGACCTaGTCTGGTGTCCGAGACCGT +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGKSTMT*SGVRDR
Trigger: ACGGTCTCGGACACCAGAGCAGGTCATGGTGGACTT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCCATCACAGCCTGCATaGCTTCTTGACCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGPSQPA*LLDLRP
Trigger: GGGTCTCAGGTCAAGAAGGCATGCAGGCTGTGATGG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGAAGTCCACCATGACCTaGTCTGGTGTCTGGTACCAC +
Preference number: 4 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWKSTMT*SGVWYH
Trigger: GTGGTACCAGACACCAGAGCAGGTCATGGTGGACTT...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGTCGCCAGTGATATCTaGCCCATTGGAGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGVASDI*PIGEPQ
Trigger: CTGAGGCTCTCCAATGGGCCAGATATCACTGGCGAC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGAACTGTCCTGCAGCTaGGGGCTCTCGGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFELSCS*GLSVLP
Trigger: TGGCAAAACCGAGAGCCCCCAGCTGCAGGACAGTTC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGCAAGGGTCATCACCTaGAGATGGCTGCGGACCAAT +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGARVIT*RWLRTN
Trigger: ATTGGTCCGCAGCCATCTCCAGGTGATGACCCTTGC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAACTTAGCTCTCAGAATTaGAGATGGAAACAGGGATCC +
Preference number: 4 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKLSSQN*RWKQGS
Trigger: GGATCCCTGTTTCCATCTCCAATTCTGAGAGCTAAG...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCAGAAGGGCCAGGCATaGGTCTTCTTCCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGQKGQA*VFFLTC
Trigger: GCAAGTCAGGAAGAAGACCCATGCCTGGCCCTTCTG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGCCAACAGTGGTGATATaGTATGTCCATCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWPTVVI*YVHQAR
Trigger: CCGAGCCTGATGGACATATCATATCACCACTGTTGG...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGCAGCCTGTCTGGAATaGGGCACTTCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWAACLE*GTSLAP
Trigger: AGGAGCCAGTGAAGTGCCTCATTCCAGACAGGCTGC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATGGATTTGTTAATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTGCAGCCTGTCTGGAATaGGGCACTTCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: MDLLMDVTRQFLTLPTGTAACLE*GTSLAP
Trigger: AGGAGCCAGTGAAGTGCCTCATTCCAGACAGGCTGC...AGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCATTAACAAATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCAGCAGACCACAGCTTaGCACCAAGATGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGQQTTA*HQDVSS
Trigger: GGAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp ATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGTGCAAGACTCTATCTCCCAAACTCAGCTaGGGGAGCCAGCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: IIITRLFSHHTLWMCKTLSPKLS*GSQRRS
Trigger: GCTCCGGCGCTGGCTCCCGCAGCTGAGTTTGGGAGA...TAGAGTCTTGCACATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGGGGGCTCTCGGTTTTaGCATATTGCTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFGGSRF*HIAEGT
Trigger: GGTTCCCTCAGCAATATGGCAAAACCGAGAGCCCCC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCATTATGAACTGTCCTaGAGCTGGGGGCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGHYELS*SWGLSV
Trigger: AACCGAGAGCCCCCAGCTGCAGGACAGTTCATAATG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCGAACTGTCCTGCAGCTaGGGGCTCTCGGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GKTTSLVGFGRLQSNKKAELSCS*GLSVLP
Trigger: TGGCAAAACCGAGAGCCCCCAGCTGCAGGACAGTTC...GGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGGGCTCTCACACACCTaGGAGACCTCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWGLSHT*ETSSST
Trigger: TGTGGAGGAAGAGGTCTCCCAGGTGTGTGAGAGCCC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGGTCATCACCTGGAGATaGCTGCGGACCAATTTCACC +
Preference number: 4 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVVITWR*LRTNFT
Trigger: GGTGAAATTGGTCCGCAGCCATCTCCAGGTGATGAC...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCAAACGGCAAAGTCACTaGCCATCACAGCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGKRQSH*PSQPAC
Trigger: GCATGCAGGCTGTGATGGCCAGTGACTTTGCCGTTT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp CTATACATAAAGTACGAAGGCCTTGTTTGGCATAGTCATCCAAGTGCTTCTGGGCAGAAGGGCCAGGCATaGGTCTTCTTCCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: LYIKYEGLVWHSHPSASGQKGQA*VFFLTC
Trigger: GCAAGTCAGGAAGAAGACCCATGCCTGGCCCTTCTG...CCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGATCAGCCGTCGCCAGTaGTATCTGGCCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWISRRQ*YLAHWR
Trigger: TCTCCAATGGGCCAGATATCACTGGCGACGGCTGAT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCCCTGGTTGCACCTCTaGTCAGCCGTCGCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVPWLHL*SAVASD
Trigger: ATCACTGGCGACGGCTGATCAGAGGTGCAACCAGGG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCAGCCTCGGAATCTGCTaGGGTCATTGTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGSLGIC*GHCLGF
Trigger: AAAGCCCAAACAATGACCTCAGCAGATTCCGAGGCT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGTCCTGCCAACAGTGGTaGTATGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWSCQQW*YDMSIR
Trigger: CCTGATGGACATATCATATCACCACTGTTGGCAGGA...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTCGGAAAAGAGGTACTaGATCTGTCCCAGATCCTCG +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGSEKRY*ICPRSS
Trigger: CGAGGATCTGGGACAGATTCAGTACCTCTTTTCCGA...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGCCATCTTATTCTCAGTaGGGGTTCCTGTCTTATCGG +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMPSYSQ*GFLSYR
Trigger: CCGATAAGACAGGAACCCTCACTGAGAATAAGATGG...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGTTTCAATGGGGCTACTaGAAGCAGCCTGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMFQWGY*KQPVWN
Trigger: ATTCCAGACAGGCTGCTTTCAGTAGCCCCATTGAAA...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACTCAGCATCCAGATCTTaGTGCCCGCTTTGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNSASRS*CPLCEE
Trigger: CTCTTCACAAAGCGGGCATCAAGATCTGGATGCTGA...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGTTCAGGCAGTTGCATaGGGGTCTCTGCAGACACAT +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFVQAVA*GSLQTH
Trigger: ATGTGTCTGCAGAGACCCTCATGCAACTGCCTGAAC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAAAAAGATGTCAGTATCTaGGCCCTGGTAGGTAAAATA +
Preference number: 4 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKKDVSI*ALVGKI
Trigger: TATTTTACCTACCAGGGCTCAGATACTGACATCTTT...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGCTCTTGATTGGAACCTaGCAGAGGAATGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMLLIGT*QRNAFL
Trigger: CAGGAATGCATTCCTCTGTCAGGTTCCAATCAAGAG...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGAGCTGATGTCTGCCTaGCCTATGGCTTCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFELMSA*PMASVS
Trigger: GGAAACTGAAGCCATAGGTCAGGCAGACATCAGCTC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGAGGACTCCAACCTCCTaGCATTTTCTTCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMRTPTS*HFLHGS
Trigger: ACTGCCATGAAGAAAATGCCAGGAGGTTGGAGTCCT...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAATTTTCTGCAGCGGTGTaGCTCGGCAGCAGACCACAG +
Preference number: 4 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKFSAAV*LGSRPQ
Trigger: CTGTGGTCTGCTGCCGAGCCACACCGCTGCAGAAAA...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp TGCAATCATGTAGTCTCTTCTAAGGTAGAAAAGACAACAGAGTTTGACTCTATCCCCTGGTTGCACCTCTaGTCAGCCGTCGCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: CNHVVSSKVEKTTEFDSIPWLHL*SAVASD
Trigger: ATCACTGGCGACGGCTGATCAGAGGTGCAACCAGGG...GATAGAGTCAAACTCTGTTGTCTTTTCTACCTTAGAAGAGACTACATGATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTCTGTTGATAGTTGTATGGCCCTaGATCATCATCCCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: VTRQFLTLPTGTHEHILLIVVWP*IIIPGC
Trigger: GCAACCAGGGATGATGATTCAGGGCCATACAACTAT...CAACAGAATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGACAGTTTAGGGGTCTaGGAGGACTTGCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVDSLGV*EDLRPQ
Trigger: CTGTGGGCGCAAGTCCTCTCAGACCCCTAAACTGTC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp CCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATCGACAGTTTAGGGGTCTaGGAGGACTTGCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: PSMYHMAYECPYKLHLLIDSLGV*EDLRPQ
Trigger: CTGTGGGCGCAAGTCCTCTCAGACCCCTAAACTGTC...GATAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAATCCGGTGCCTTCCTaGCAGTTTAGGGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWNPVPS*QFRGLR
Trigger: TCTCAGACCCCTAAACTGTCAGGAAGGCACCGGATT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GAGTTTGACTCTATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGCCATGTCTGCAGGGATaGCCTCGTTGCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: EFDSIIITRLFSHHTLWMPCLQG*PRCRRG
Trigger: GCCTCTCCTGCAACGAGGTCATCCCTGCAGACATGG...CATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGATAGAGTCAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCCATCTTATTCTCAGTaGGGGTTCCTGTCTTATCGG +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGPSYSQ*GFLSYR
Trigger: CCGATAAGACAGGAACCCTCACTGAGAATAAGATGG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp CTATACATAAAGTACGAAGGCCTTGTTTGGCATAGTCATCCAAGTGCTTCTGGGGAGCTCCCAGCAAGATaGTTTGAGGGCTTATTTCCC +
Preference number: 4 (lower is better)
Translates to: LYIKYEGLVWHSHPSASGELPAR*FEGLFP
Trigger: GGGAAATAAGCCCTCAAATCATCTTGCTGGGAGCTC...CCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGCAGCCTGTCTGGAATaGGGCACTTCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVAACLE*GTSLAP
Trigger: AGGAGCCAGTGAAGTGCCTCATTCCAGACAGGCTGC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGGTATACACCACAACTTaGTTGGAAAGAGGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVVYTTT*LERGCR
Trigger: CCGACACCCTCTTTCCAATCAAGTTGTGGTGTATAC...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCTCAGCATCCAGATCTTaGTGCCCGCTTTGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFSASRS*CPLCEE
Trigger: CTCTTCACAAAGCGGGCATCAAGATCTGGATGCTGA...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCATGCCTTCTTGACCTaGGACCCCTATCCCAATGTC +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWHAFLT*DPYPNV
Trigger: GACATTGGGATAGGGGTCTCAGGTCAAGAAGGCATG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGATTCCGACTGGAGCCTaGCCATTTAAAGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVIPTGA*PFKAFP
Trigger: GGGAAATGCTTTAAATGGTCAGGCTCCAGTCGGAAT...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGGAAGGAAATTCTGGATaGCTGGTGGCTGACAACTTT +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMEGNSG*LVADNF
Trigger: AAAGTTGTCAGCCACCAGTCATCCAGAATTTCCTTC...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTCTGTTGTCCCACTGGAACTCATaGACACATTCTGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VTRQFLTLPTGTHEHILLSHWNS*THSVEL
Trigger: GAGCTCAACAGAATGTGTTCATGAGTTCCAGTGGGA...CAACAGAATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAGTGAAAGCGGGTTGTaGTTCCACGCCAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWSESGL*FHASHL
Trigger: CAAATGGCTGGCGTGGAAGCACAACCCGCTTTCACT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGGAACAACAATCCGGTaGCTTCCTGACAGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFGTTIR*LPDSLG
Trigger: CCCTAAACTGTCAGGAAGGCACCGGATTGTTGTTCC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp ATGGATTTGTTAATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATTATGAACTGTCCTaGAGCTGGGGGCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: MDLLMDVTRQFLTLPTGTHYELS*SWGLSV
Trigger: AACCGAGAGCCCCCAGCTGCAGGACAGTTCATAATG...AGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCATTAACAAATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACTTTTGCAGACTTTCTTaGAGGGCAAACTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNFCRLS*RANSRV
Trigger: GACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAA...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR GCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGTTGCATGAGGGTCTCTaGAGACACATCTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWLHEGL*RHIFLQ
Trigger: TTGGAGAAAGATGTGTCTGCAGAGACCCTCATGCAA...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTCTGTTGAATGAGGCACTTCACTaGCTCCTTCTCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: VTRQFLTLPTGTHEHILLNEALH*LLLHFL
Trigger: TAGGAAGTGGAGAAGGAGCCAGTGAAGTGCCTCATT...CAACAGAATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGCTCACAAAGGCGTTTaGAACTCCAGAAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFAHKGV*NSRRWL
Trigger: GAGCCATCTTCTGGAGTTCCAAACGCCTTTGTGAGC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACCCAGTAAGGGTTGGATaGTGGGTTGCAAGTTACACA +
Preference number: 4 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNPVRVG*WVASYT
Trigger: TGTGTAACTTGCAACCCACCATCCAACCCTTACTGG...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGCTCTGTATACAAACCTaGGCAGAAGAGCAATGGACG +
Preference number: 4 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVLCIQT*AEEQWT
Trigger: CGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAG...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CAA 72 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTaGATTGGAAAGAGGGTGTCGGACCACAACAGACAT +
Preference number: 4 (lower is better)
Translates to: DHRISAFRIHHN*IGKRVSDHNRH
Trigger: ATGTCTGTTGTGGTCCGACACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CAA 72 bp AGATGTCAGTTCCAGGAACTGCTTTTGCAGACTTTCTaGCAGGGCAAACTCCAGGGTCTTCCCAGTGATAAT +
Preference number: 4 (lower is better)
Translates to: RCQFQELLLQTF*QGKLQGLPSDN
Trigger: ATTATCACTGGGAAGACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAAGCAGTTCCTGGAACTGACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp AGGGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGAATCCGGTGCCTTCCTaGCAGTTTAGGGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: REKPQVWWDLGDYRAIKRNPVPS*QFRGLR
Trigger: TCTCAGACCCCTAAACTGTCAGGAAGGCACCGGATT...CCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCCAGAAGTCTCAATGTaGCAGATTCCATCTGGATCA +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGPEVSM*QIPSGS
Trigger: TGATCCAGATGGAATCTGTCACATTGAGACTTCTGG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp ATGGATTTGTTAATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTAGCCTCGGAATCTGCTaGGGTCATTGTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: MDLLMDVTRQFLTLPTGTSLGIC*GHCLGF
Trigger: AAAGCCCAAACAATGACCTCAGCAGATTCCGAGGCT...AGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCATTAACAAATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCCCAACAGTGGTGATATaGTATGTCCATCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GKTTSLVGFGRLQSNKKAPTVVI*YVHQAR
Trigger: CCGAGCCTGATGGACATATCATATCACCACTGTTGG...GGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCCGGGGGACAGGAGGCTaGAGTAAATCTTCACTTAAT +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFRGTGG*SKSSLN
Trigger: ATTAAGTGAAGATTTACTTCAGCCTCCTGTCCCCCG...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAACATGCCTTCTTGACCTaGGACCCCTATCCCAATGTC +
Preference number: 4 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKHAFLT*DPYPNV
Trigger: GACATTGGGATAGGGGTCTCAGGTCAAGAAGGCATG...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAAGTTCAGGCAGTTGCATaGGGGTCTCTGCAGACACAT +
Preference number: 4 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKVQAVA*GSLQTH
Trigger: ATGTGTCTGCAGAGACCCTCATGCAACTGCCTGAAC...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACAATGGGCCACAGGCTaGGCTGATGTCTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKQWATG*ADVCLT
Trigger: GGTCAGGCAGACATCAGCTCAGCCTGTGGCCCATTG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTTTACAATGGGGCTACTaGAAGCAGCCTGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: MDVTRQFLTLPTGTHEHILQWGY*KQPVWN
Trigger: ATTCCAGACAGGCTGCTTTCAGTAGCCCCATTGTAA...AATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp AAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCTTCAAGTGAAAGCGGGTTGTaGTTCCACGCCAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: KPQVWWDLGDYRAIKRPSSESGL*FHASHL
Trigger: CAAATGGCTGGCGTGGAAGCACAACCCGCTTTCACT...TGAAGGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCTCTTCTTTCTAATTTaGTGCGCTTATACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGLFFLI*CAYTVA
Trigger: GGCCACGGTATAAGCGCAGCAAATTAGAAAGAAGAG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGTTGTTTCTCCAGACTTaGTCCATCTGGGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWLFLQT*SIWGSH
Trigger: GTGGCTTCCCCAGATGGAGCAAGTCTGGAGAAACAA...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGATTCCTCAGCCACTCTaGATATTCAGTGTCACTCAT +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMIPQPL*IFSVTH
Trigger: ATGAGTGACACTGAATATGCAGAGTGGCTGAGGAAT...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR GCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCTTTTGCAGACTTTCTTaGAGGGCAAACTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFFCRLS*RANSRV
Trigger: GACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAA...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCCCTATCCCAATGTCTaGCACTTGTATCATGCTAAC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGPYPNV*HLYHAN
Trigger: GTTAGCATGATACAAGTGGCAGACATTGGGATAGGG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGGTTGGATGGTGGGTTaGAAGTTACACACATGGCTC +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWGWMVG*KLHTWL
Trigger: GAGCCATGTGTGTAACTTGCAACCCACCATCCAACC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp AAAAGGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGGTCGCCAGTGATATCTaGCCCATTGGAGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KRPSMYHMAYECPYKLHLVASDI*PIGEPQ
Trigger: CTGAGGCTCTCCAATGGGCCAGATATCACTGGCGAC...CAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCAATGAGGCACTTCACTaGCTCCTTCTCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFNEALH*LLLHFL
Trigger: TAGGAAGTGGAGAAGGAGCCAGTGAAGTGCCTCATT...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCATTTGTCTAAAAGCCTaGTGTCTGGTACCACGTCTG +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGICLKA*CLVPRL
Trigger: CAGACGTGGTACCAGACACCAGGCTTTTAGACAAAT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACAGGTTGCAGGCCAATaGCTGTCCAGGGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKQVAGQ*LSREGL
Trigger: GAGTCCCTCCCTGGACAGCCATTGGCCTGCAACCTG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTACGAAGGCCTTGTTTaGCATAGTCATCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGYEGLV*HSHPSA
Trigger: AGCACTTGGATGACTATGCCAAACAAGGCCTTCGTA...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGGTAAGGGTTGGATGGTaGGTTGCAAGTTACACACAT +
Preference number: 4 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVVRVGW*VASYTH
Trigger: ATGTGTGTAACTTGCAACCCACCATCCAACCCTTAC...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCACCATGACCTGCTCTaGTGTCTGGTACCACGTCTG +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVHHDLL*CLVPRL
Trigger: CAGACGTGGTACCAGACACCAGAGCAGGTCATGGTG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCACAAATTCGAAGAGTaGAAGCGGGTTGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWHKFEE*KRVVLP
Trigger: TGGAAGCACAACCCGCTTTCACTCTTCGAATTTGTG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GAGTTTGACTCTATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGATCAGCCGTCGCCAGTaGTATCTGGCCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: EFDSIIITRLFSHHTLWMISRRQ*YLAHWR
Trigger: TCTCCAATGGGCCAGATATCACTGGCGACGGCTGAT...CATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGATAGAGTCAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGATAGTTGTATGGCCCTaGATCATCATCCCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWIVVWP*IIIPGC
Trigger: GCAACCAGGGATGATGATTCAGGGCCATACAACTAT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp CAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCTTCAATGTACTCGGAAAAGAGGTACTaGATCTGTCCCAGATCCTCG +
Preference number: 4 (lower is better)
Translates to: QVWWDLGDYRAIKRPSMYSEKRY*ICPRSS
Trigger: CGAGGATCTGGGACAGATTCAGTACCTCTTTTCCGA...GTACATTGAAGGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTTGATGCCCGCTTTGTaGAGAGCTTCTATAGATTCA +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGLMPAL*RASIDS
Trigger: TGAATCTATAGAAGCTCTTCACAAAGCGGGCATCAA...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp CTATACATAAAGTACGAAGGCCTTGTTTGGCATAGTCATCCAAGTGCTTCTGGGATGCATAAGCTATGTTaGCAGCTGTCTCCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LYIKYEGLVWHSHPSASGMHKLC*QLSPAC
Trigger: ACAAGCAGGAGACAGCTGTCAACATAGCTTATGCAT...CCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGCCTGCATGCCTTCTTaGCCTGAGACCCCTATCCCA +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKACMPS*PETPIP
Trigger: TGGGATAGGGGTCTCAGGTCAAGAAGGCATGCAGGC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGATGGAGGAGAACGATaGACAGAGCGGCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVDGGER*TERLCS
Trigger: TGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp CTATACATAAAGTACGAAGGCCTTGTTTGGCATAGTCATCCAAGTGCTTCTGGGAACTCTTGCTTTCAATaGCCAGATGGAGGAGAACGA +
Preference number: 4 (lower is better)
Translates to: LYIKYEGLVWHSHPSASGNSCFQ*PDGGER
Trigger: TCGTTCTCCTCCATCTGGTCATTGAAAGCAAGAGTT...CCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCATGATGACCAGCAAGTaGATCCAAGTCAAACTCTTG +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGMMTSK*IQVKLL
Trigger: CAAGAGTTTGACTTGGATTCACTTGCTGGTCATCAT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCTACTTTGATGTCACTTaGTTCATCTTTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGYFDVT*FIFPAP
Trigger: AGGGGCTGGAAAGATGAATCAAGTGACATCAAAGTA...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCAGCACAGGAACTTGCTaGCTTCATTGCAAATACAGC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFSTGTC*LHCKYS
Trigger: GCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCT...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGATTCCGACTGGAGCCTaGCCATTTAAAGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWIPTGA*PFKAFP
Trigger: GGGAAATGCTTTAAATGGTCAGGCTCCAGTCGGAAT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGACGATTTCAGGGAATaGATGCCAGCTGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVDDFRE*MPAAVR
Trigger: CCTCACAGCAGCTGGCATTCATTCCCTGAAATCGTC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp GGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTAGGAACAACAATCCGGTaGCTTCCTGACAGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: GLQCTTWPMNVPINYTCLGTTIR*LPDSLG
Trigger: CCCTAAACTGTCAGGAAGGCACCGGATTGTTGTTCC...TAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGCCTCTGTTTTAAATTaGTCTCTCCATCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGASVLN*SLHQDQ
Trigger: CTGGTCTTGATGGAGAGAGCAATTTAAAACAGAGGC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp AGGGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGTTCAGAGTCCTGTTCTaGATATCCCCGAACCACCTG +
Preference number: 4 (lower is better)
Translates to: REKPQVWWDLGDYRAIKRFRVLF*ISPNHL
Trigger: CAGGTGGTTCGGGGATATGCAGAACAGGACTCTGAA...CCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCTGCATAAACCACAATaGCCACAACAGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWLHKPQ*PQQPLC
Trigger: ACACAGAGGCTGTTGTGGGCATTGTGGTTTATGCAG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp GGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCCTGCATAAACCACAATaGCCACAACAGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GKTTSLVGFGRLQSNKKALHKPQ*PQQPLC
Trigger: ACACAGAGGCTGTTGTGGGCATTGTGGTTTATGCAG...GGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGGCAGTAATCAAATCCTaGCACACTACATCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMAVIKS*HTTSSK
Trigger: TTTCGAAGATGTAGTGTGGCAGGATTTGATTACTGC...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR GCA 90 bp ATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGTGCAAGACTCTAGGGGGCTCTCGGTTTTaGCATATTGCTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: IIITRLFSHHTLWMCKTLGGSRF*HIAEGT
Trigger: GGTTCCCTCAGCAATATGGCAAAACCGAGAGCCCCC...TAGAGTCTTGCACATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGTCCAGGAACTGCTTTTaGAGACTTTCTTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWSRNCF*RLSCRA
Trigger: TGCCCTGCAAGAAAGTCTGCAAAAGCAGTTCCTGGA...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCCCCTATCCCAATGTCTaGCACTTGTATCATGCTAAC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFPYPNV*HLYHAN
Trigger: GTTAGCATGATACAAGTGGCAGACATTGGGATAGGG...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCTTGCATGAGGGTCTCTaGAGACACATCTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFLHEGL*RHIFLQ
Trigger: TTGGAGAAAGATGTGTCTGCAGAGACCCTCATGCAA...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTACACATCACAGCATGTTaGTCACGAGTCGCAAGGTAC +
Preference number: 4 (lower is better)
Translates to: GLQCTTWPMNVPINYTCLHITAC*SRVARY
Trigger: GTACCTTGCGACTCGTGACCAACATGCTGTGATGTG...TAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTTGAAGGGCTGGATGTaGGGAACAACAATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVLKGWM*GTTIRC
Trigger: GCACCGGATTGTTGTTCCCCACATCCAGCCCTTCAA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGACACCACAACTTGATTaGAAAGAGGGTGTCGGACCA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWTPQLD*KEGVGP
Trigger: TGGTCCGACACCCTCTTTCCAATCAAGTTGTGGTGT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCTACGAAGGCCTTGTTTaGCATAGTCATCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFYEGLV*HSHPSA
Trigger: AGCACTTGGATGACTATGCCAAACAAGGCCTTCGTA...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAATTTTCTGCAGCGGTGTaGCTCGGCAGCAGACCACAG +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKFSAAV*LGSRPQ
Trigger: CTGTGGTCTGCTGCCGAGCCACACCGCTGCAGAAAA...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGTGATCCAGAAGGTATaGGGTAAGTATGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFVIQKV*GKYASD
Trigger: ATCAGAGGCATACTTACCCCATACCTTCTGGATCAC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCCAGTAAGGGTTGGATaGTGGGTTGCAAGTTACACA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWPVRVG*WVASYT
Trigger: TGTGTAACTTGCAACCCACCATCCAACCCTTACTGG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCTCTGTATACAAACCTaGGCAGAAGAGCAATGGACG +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWLCIQT*AEEQWT
Trigger: CGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGACTTGCCAGCTGATTaGTTAGCATACTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGDLPAD*LAYFDV
Trigger: GACATCAAAGTATGCTAACCAATCAGCTGGCAAGTC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGGAAATTCTGGATGACTaGTGGCTGACAACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWEILDD*WLTTFK
Trigger: TTTGAAAGTTGTCAGCCACCAGTCATCCAGAATTTC...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTCTCATACTCATCCTTaGAGGGCTGGATGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVSHTHP*RAGCGE
Trigger: TTCCCCACATCCAGCCCTTCAAGGATGAGTATGAGA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp TGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATCTGACTACTCTCATACTCATCCTTaGAGGGCTGGATGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: CTTWPMNVPINYTCLSDYSHTHP*RAGCGE
Trigger: TTCCCCACATCCAGCCCTTCAAGGATGAGTATGAGA...GTAGTCAGATAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCCAACAGTGGTGATATaGTATGTCCATCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVPTVVI*YVHQAR
Trigger: CCGAGCCTGATGGACATATCATATCACCACTGTTGG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp CAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCTTCAATGTACTCCTGCCAACAGTGGTaGTATGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: QVWWDLGDYRAIKRPSMYSCQQW*YDMSIR
Trigger: CCTGATGGACATATCATATCACCACTGTTGGCAGGA...GTACATTGAAGGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCTTCAGGGCTCGGCACTaGACAATAGAATCCATTTTT +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFFRARH*TIESIF
Trigger: AAAAATGGATTCTATTGTTCAGTGCCGAGCCCTGAA...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTCGGAAAAGAGGTACTaGATCTGTCCCAGATCCTCG +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVSEKRY*ICPRSS
Trigger: CGAGGATCTGGGACAGATTCAGTACCTCTTTTCCGA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCTGAGATGTTTGAACTaGGAAACGGCAAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWLRCLN*ETAKSL
Trigger: CAGTGACTTTGCCGTTTCTCAGTTCAAACATCTCAG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAACTCTTGCTTTCAATaGCCAGATGGAGGAGAACGA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWNSCFQ*PDGGER
Trigger: TCGTTCTCCTCCATCTGGTCATTGAAAGCAAGAGTT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAGCACAGGAACTTGCTaGCTTCATTGCAAATACAGC +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWSTGTC*LHCKYS
Trigger: GCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCAGGAAAACATTGAAATaGGTGAGAGGTATGCCTACA +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGRKTLK*VRGMPT
Trigger: TGTAGGCATACCTCTCACTCATTTCAATGTTTTCCT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGTGGATGACTGGTGGCTaGCAACTTTCAAATATAATA +
Preference number: 4 (lower is better)
Translates to: IAQELADFIANTAEGPGMWMTGG*QLSNII
Trigger: TATTATATTTGAAAGTTGTCAGCCACCAGTCATCCA...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR GCA 90 bp GTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTCTGTTGCAGGCCATCTTTAATTaGGATAATTGTAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: VTRQFLTLPTGTHEHILLQAIFN*DNCKDH
Trigger: GTGGTCCTTACAATTATCGCAATTAAAGATGGCCTG...CAACAGAATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTTCAGAGTCCTGTTCTaGATATCCCCGAACCACCTG +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVFRVLF*ISPNHL
Trigger: CAGGTGGTTCGGGGATATGCAGAACAGGACTCTGAA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp CTATACATAAAGTACGAAGGCCTTGTTTGGCATAGTCATCCAAGTGCTTCTGGGGTTCTTTCAAAATTGTaGTCATCAGCATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LYIKYEGLVWHSHPSASGVLSKL*SSASHR
Trigger: CCTGTGGGATGCTGATGAGCACAATTTTGAAAGAAC...CCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR GCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAATCCAGGAACTGCTTTTaGAGACTTTCTTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKSRNCF*RLSCRA
Trigger: TGCCCTGCAAGAAAGTCTGCAAAAGCAGTTCCTGGA...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAACCACTTCACTTTTCTaGAGCGGTGTGGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKTTSLF*SGVARQ
Trigger: CTGCCGAGCCACACCGCTGCAGAAAAGTGAAGTGGT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGGTTGGATGGTGGGTTaGAAGTTACACACATGGCTC +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVGWMVG*KLHTWL
Trigger: GAGCCATGTGTGTAACTTGCAACCCACCATCCAACC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACGTTAGTCTGTCAAAGTaGTTAGCTCTCAGAATTGGA +
Preference number: 4 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNVSLSK*LALRIG
Trigger: TCCAATTCTGAGAGCTAAGCACTTTGACAGACTAAC...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCACATCACAGCATGTTaGTCACGAGTCGCAAGGTAC +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVHITAC*SRVARY
Trigger: GTACCTTGCGACTCGTGACCAACATGCTGTGATGTG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCATGGTGATTTCCTTTTaGAAGGCTTCTACCAAAGGT +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGMVISF*KASTKG
Trigger: ACCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCAT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGTGGAACTCCAGAAGATaGCTCTTTCCCACTGTTAAG +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWWNSRR*LFPTVK
Trigger: CTTAACAGTGGGAAAGAGCCATCTTCTGGAGTTCCA...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAATGCATTGGTAAGCCCTaGCGGCATACACTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKCIGKP*RHTLRP
Trigger: CGGCCTTAGTGTATGCCGCCAGGGCTTACCAATGCA...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGCAAGGGTCATCACCTaGAGATGGCTGCGGACCAAT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKARVIT*RWLRTN
Trigger: ATTGGTCCGCAGCCATCTCCAGGTGATGACCCTTGC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGAATAGAGAATCATGTTaGAAAGCCGTGTATAACACC +
Preference number: 4 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWNRESC*KAVYNT
Trigger: GGTGTTATACACGGCTTTCCAACATGATTCTCTATT...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp CTATACATAAAGTACGAAGGCCTTGTTTGGCATAGTCATCCAAGTGCTTCTGGGCTTTCAATGACCAGATaGAGGAGAACGATGAACAGA +
Preference number: 4 (lower is better)
Translates to: LYIKYEGLVWHSHPSASGLSMTR*RRTMNR
Trigger: TCTGTTCATCGTTCTCCTCCATCTGGTCATTGAAAG...CCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGTAAGGGTTGGATGGTaGGTTGCAAGTTACACACAT +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWVRVGW*VASYTH
Trigger: ATGTGTGTAACTTGCAACCCACCATCCAACCCTTAC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp CTATACATAAAGTACGAAGGCCTTGTTTGGCATAGTCATCCAAGTGCTTCTGGGGACTTGCCAGCTGATTaGTTAGCATACTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: LYIKYEGLVWHSHPSASGDLPAD*LAYFDV
Trigger: GACATCAAAGTATGCTAACCAATCAGCTGGCAAGTC...CCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CAA 72 bp GCCAGGAATAGGGAAAAACCACAAGTTTGGTGGGATTaGGGAGATTACAGAGCAATAAAAAGGCCTTCAATG +
Preference number: 4 (lower is better)
Translates to: ARNREKPQVWWD*GDYRAIKRPSM
Trigger: CATTGAAGGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCCCTATTCCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCCAGGCTCGGGAACATTaGAAAAATGCATCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFQAREH*KNASFH
Trigger: ATGAAAAGATGCATTTTTTCAATGTTCCCGAGCCTG...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTCCTGCCAACAGTGGTaGTATGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVSCQQW*YDMSIR
Trigger: CCTGATGGACATATCATATCACCACTGTTGGCAGGA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp TGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATCTGACTACCCATCTTATTCTCAGTaGGGGTTCCTGTCTTATCGG +
Preference number: 4 (lower is better)
Translates to: CTTWPMNVPINYTCLSDYPSYSQ*GFLSYR
Trigger: CCGATAAGACAGGAACCCTCACTGAGAATAAGATGG...GTAGTCAGATAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTAAGCGATGGAGAACTTaGTCTTCGGACAGACCATCT +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVKRWRT*SSDRPS
Trigger: AGATGGTCTGTCCGAAGATCAAGTTCTCCATCGCTT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGATGATGACCAGCAAGTaGATCCAAGTCAAACTCTTG +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWMMTSK*IQVKLL
Trigger: CAAGAGTTTGACTTGGATTCACTTGCTGGTCATCAT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGTACTTTGATGTCACTTaGTTCATCTTTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWYFDVT*FIFPAP
Trigger: AGGGGCTGGAAAGATGAATCAAGTGACATCAAAGTA...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCTCTTGATTGGAACCTaGCAGAGGAATGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVLLIGT*QRNAFL
Trigger: CAGGAATGCATTCCTCTGTCAGGTTCCAATCAAGAG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGAGCTGATGTCTGCCTaGCCTATGGCTTCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKELMSA*PMASVS
Trigger: GGAAACTGAAGCCATAGGTCAGGCAGACATCAGCTC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCAGCTATGTGAGATTTTaGAAGTTCTCGAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: DQATVSFKIQEITQWATGSYVRF*KFSKSA
Trigger: AGCTGATTTCGAGAACTTTCAAAATCTCACATAGCT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACCTTCCATTAGCTATGTaGGATTTTGAAAGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNLPLAM*DFESSR
Trigger: TCGAGAACTTTCAAAATCTCACATAGCTAATGGAAG...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAATCATCATCCCTGGTTaGACCTCTGATCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKIIIPG*TSDQPS
Trigger: CGACGGCTGATCAGAGGTGCAACCAGGGATGATGAT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCCAGGCCATCTTTAATTaGGATAATTGTAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFQAIFN*DNCKDH
Trigger: GTGGTCCTTACAATTATCGCAATTAAAGATGGCCTG...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp TTGTTAATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAAGCCTCTGTTTTAAATTaGTCTCTCCATCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: LLMDVTRQFLTLPTGTHEASVLN*SLHQDQ
Trigger: CTGGTCTTGATGGAGAGAGCAATTTAAAACAGAGGC...TTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCATTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp GGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATATCCCCGAACCACCTaGCTCTGTTTTAAATTGCTC +
Preference number: 4 (lower is better)
Translates to: GLQCTTWPMNVPINYTCLYPRTT*LCFKLL
Trigger: GAGCAATTTAAAACAGAGGCAGGTGGTTCGGGGATA...TAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCTCATAACACAGGTTaGAGGCCAATGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPHNTG*RPMAVQ
Trigger: CTGGACAGCCATTGGCCTGCAACCTGTGTTATGAGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTCATCCTTGAAGGGCTaGATGTGGGGAACAACAATC +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVSSLKG*MWGTTI
Trigger: GATTGTTGTTCCCCACATCCAGCCCTTCAAGGATGA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTAGGACTCCAACCTCCTaGCATTTTCTTCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVRTPTS*HFLHGS
Trigger: ACTGCCATGAAGAAAATGCCAGGAGGTTGGAGTCCT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAAAACGGCAAAGTCACTaGCCATCACAGCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKKRQSH*PSQPAC
Trigger: GCATGCAGGCTGTGATGGCCAGTGACTTTGCCGTTT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACTGCTCATGTCCCTTATaGAAAAACAAGTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNCSCPL*KNKSFL
Trigger: CAAGAATGACTTGTTTTTCCATAAGGGACATGAGCA...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGCCTTCAAGTGGTCTCTaGAAGATTGTTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVPSSGL*KIVLKL
Trigger: CAATTTCAAAACAATCTTCCAGAGACCACTTGAAGG...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGTGGATATGAGATTGTaGCCCTGTAACATTAGCACT +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWVDMRL*PCNIST
Trigger: AGTGCTAATGTTACAGGGCCACAATCTCATATCCAC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTACCTGCTCTGGTGTCTaGTACCACGTCTGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVTCSGV*YHVCFN
Trigger: ATTGAAACAGACGTGGTACCAGACACCAGAGCAGGT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
3UTR CAA 72 bp CGGTCTTCAATGCCAGTAGCACCAAGTAATGTAAGTTaGTTCTCCAACCTCATGGCAGATTCAAGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: RSSMPVAPSNVS*FSNLMADSSSN
Trigger: ATTACTACTTGAATCTGCCATGAGGTTGGAGAACAAACTTACATTACTTGGTGCTACTGGCATTGAAGACCG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp TGCAATCATGTAGTCTCTTCTAAGGTAGAAAAGACAACAGAGTTTGACTCTATCCACAAATTCGAAGAGTaGAAGCGGGTTGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: CNHVVSSKVEKTTEFDSIHKFEE*KRVVLP
Trigger: TGGAAGCACAACCCGCTTTCACTCTTCGAATTTGTG...GATAGAGTCAAACTCTGTTGTCTTTTCTACCTTAGAAGAGACTACATGATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp TGCAATCATGTAGTCTCTTCTAAGGTAGAAAAGACAACAGAGTTTGACTCTATCCCAGAGGCAACATGGTaGTTTCCTTTTGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: CNHVVSSKVEKTTEFDSIPEATW*FPFGRL
Trigger: AAGCCTTCCAAAAGGAAATCACCATGTTGCCTCTGG...GATAGAGTCAAACTCTGTTGTCTTTTCTACCTTAGAAGAGACTACATGATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGACAAATTTTCTTTACTaGGACCCACGCGTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWTNFLY*DPRVLC
Trigger: ACAAAGAACGCGTGGGTCTCAGTAAAGAAAATTTGT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAATTCAGGGCTCGGCACTaGACAATAGAATCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKFRARH*TIESIF
Trigger: AAAAATGGATTCTATTGTTCAGTGCCGAGCCCTGAA...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGAGCTCCCAGCAAGATaGTTTGAGGGCTTATTTCCC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKELPAR*FEGLFP
Trigger: GGGAAATAAGCCCTCAAATCATCTTGCTGGGAGCTC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATGAATGTCCCTATAAATTACACTTGCTTATCTGACTACGAGATAACTCTGGTAGAGCTCCCAGCAAGATaGTTTGAGGGCTTATTTCCC +
Preference number: 4 (lower is better)
Translates to: MNVPINYTCLSDYEITLVELPAR*FEGLFP
Trigger: GGGAAATAAGCCCTCAAATCATCTTGCTGGGAGCTC...TACCAGAGTTATCTCGTAGTCAGATAAGCAAGTGTAATTTATAGGGACATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCGACAGTAACTCCATaGTCACAGAATCAGCGCCTT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPTVTP*SQNQRL
Trigger: AAGGCGCTGATTCTGTGATCATGGAGTTACTGTCGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAGTCATGGATGTTCCTaGAAATCCACAAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWSHGCS*KSTKEL
Trigger: CAGTTCTTTTGTGGATTTTCAGGAACATCCATGACT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGAGCAATGGACGTCGTaGGGATACAAACTAAGTAGA +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVEQWTS*GYKLSR
Trigger: TCTACTTAGTTTGTATCCTCACGACGTCCATTGCTC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGGAAACAGGGATCCCTaGAGAACTCTGTATACAAAC +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVGNRDP*RTLYTN
Trigger: GTTTGTATACAGAGTTCTTCAGGGATCCCTGTTTCC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTATCCCCGAACCACCTaGCTCTGTTTTAAATTGCTC +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVYPRTT*LCFKLL
Trigger: GAGCAATTTAAAACAGAGGCAGGTGGTTCGGGGATA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR GCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGCAGTAATCAAATCCTaGCACACTACATCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWAVIKS*HTTSSK
Trigger: TTTCGAAGATGTAGTGTGGCAGGATTTGATTACTGC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAATTGTTTCTCCAGACTTaGTCCATCTGGGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKLFLQT*SIWGSH
Trigger: GTGGCTTCCCCAGATGGAGCAAGTCTGGAGAAACAA...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAATCACCTGGAGATGGCTaGGGACCAATTTCACCACTT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKSPGDG*GPISPL
Trigger: AAGTGGTGAAATTGGTCCGCAGCCATCTCCAGGTGA...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp AGGGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGGTGATCTTGCTGAGCTaGAATCATGTAGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: REKPQVWWDLGDYRAIKRVILLS*NHVVSS
Trigger: AGAAGAGACTACATGATTGCAGCTCAGCAAGATCAC...CCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp TGCAATCATGTAGTCTCTTCTAAGGTAGAAAAGACAACAGAGTTTGACTCTATCTCATCCTTGAAGGGCTaGATGTGGGGAACAACAATC +
Preference number: 4 (lower is better)
Translates to: CNHVVSSKVEKTTEFDSISSLKG*MWGTTI
Trigger: GATTGTTGTTCCCCACATCCAGCCCTTCAAGGATGA...GATAGAGTCAAACTCTGTTGTCTTTTCTACCTTAGAAGAGACTACATGATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp ATGGATTTGTTAATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTATGGTGATTTCCTTTTaGAAGGCTTCTACCAAAGGT +
Preference number: 4 (lower is better)
Translates to: MDLLMDVTRQFLTLPTGTMVISF*KASTKG
Trigger: ACCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCAT...AGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCATTAACAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp GAGTTTGACTCTATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGCCACGCGTTCTTTGTTaGAATGTTCTAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: EFDSIIITRLFSHHTLWMPRVLC*NVLGSL
Trigger: GAGGCTTCCTAGAACATTCCAACAAAGAACGCGTGG...CATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGATAGAGTCAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp GAGTTTGACTCTATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGAGGACTCCAACCTCCTaGCATTTTCTTCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: EFDSIIITRLFSHHTLWMRTPTS*HFLHGS
Trigger: ACTGCCATGAAGAAAATGCCAGGAGGTTGGAGTCCT...CATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGATAGAGTCAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCGGACAGACCATCTCTaGAAAAGACTTTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWRTDHL*KRLLIS
Trigger: AGAGATTAAAAGTCTTTTCCAGAGATGGTCTGTCCG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCCAGGCATCTTTACTTTaGGTATTGAGGATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFQASLL*VLRIKS
Trigger: GCTTTTTATCCTCAATACCCAAAGTAAAGATGCCTG...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCAATAGAGAATCATGTTaGAAAGCCGTGTATAACACC +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFNRESC*KAVYNT
Trigger: GGTGTTATACACGGCTTTCCAACATGATTCTCTATT...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGTGCAAGTTACACACATaGCTCCAAAAACTATGGCAA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWCKLHT*LQKLWQ
Trigger: TTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCA...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGAAATTCTGGATGACTaGTGGCTGACAACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWEILDD*WLTTFK
Trigger: TTTGAAAGTTGTCAGCCACCAGTCATCCAGAATTTC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCCAGTTTTCAGAGGTTTaGAGATTTTGGAATTGTGGA +
Preference number: 4 (lower is better)
Translates to: KAPPQENIEMSERYAYIFQFSEV*RFWNCG
Trigger: TCCACAATTCCAAAATCTCCAAACCTCTGAAAACTG...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCAGAGGCAACATGGTaGTTTCCTTTTGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPEATW*FPFGRL
Trigger: AAGCCTTCCAAAAGGAAATCACCATGTTGCCTCTGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR TCA 90 bp TGCAATCATGTAGTCTCTTCTAAGGTAGAAAAGACAACAGAGTTTGACTCTATCCCAGAAGTCTCAATGTaGCAGATTCCATCTGGATCA +
Preference number: 4 (lower is better)
Translates to: CNHVVSSKVEKTTEFDSIPEVSM*QIPSGS
Trigger: TGATCCAGATGGAATCTGTCACATTGAGACTTCTGG...GATAGAGTCAAACTCTGTTGTCTTTTCTACCTTAGAAGAGACTACATGATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp AAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCTTCACAGGCTCGGGAACATTaGAAAAATGCATCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: KPQVWWDLGDYRAIKRPSQAREH*KNASFH
Trigger: ATGAAAAGATGCATTTTTTCAATGTTCCCGAGCCTG...TGAAGGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAATTTCAATGGGGCTACTaGAAGCAGCCTGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKFQWGY*KQPVWN
Trigger: ATTCCAGACAGGCTGCTTTCAGTAGCCCCATTGAAA...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTTGATGCCCGCTTTGTaGAGAGCTTCTATAGATTCA +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVLMPAL*RASIDS
Trigger: TGAATCTATAGAAGCTCTTCACAAAGCGGGCATCAA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACGGGGGACAGGAGGCTaGAGTAAATCTTCACTTAAT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKRGTGG*SKSSLN
Trigger: ATTAAGTGAAGATTTACTTCAGCCTCCTGTCCCCCG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGTGGATGACTGGTGGCTaGCAACTTTCAAATATAATA +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWWMTGG*QLSNII
Trigger: TATTATATTTGAAAGTTGTCAGCCACCAGTCATCCA...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp AGGGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGTTACACTTGCTTATCTaGCTACGAGATAACTCTGGT +
Preference number: 4 (lower is better)
Translates to: REKPQVWWDLGDYRAIKRLHLLI*LRDNSG
Trigger: ACCAGAGTTATCTCGTAGTCAGATAAGCAAGTGTAA...CCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp ATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGTGCAAGACTCTACTCTTCTTTCTAATTTaGTGCGCTTATACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: IIITRLFSHHTLWMCKTLLFFLI*CAYTVA
Trigger: GGCCACGGTATAAGCGCAGCAAATTAGAAAGAAGAG...TAGAGTCTTGCACATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTATTCCTCAGCCACTCTaGATATTCAGTGTCACTCAT +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVIPQPL*IFSVTH
Trigger: ATGAGTGACACTGAATATGCAGAGTGGCTGAGGAAT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGTTCTTTCAAAATTGTaGTCATCAGCATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVVLSKL*SSASHR
Trigger: CCTGTGGGATGCTGATGAGCACAATTTTGAAAGAAC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAGAGATAAGTTTCCTTaGTCAATAGCACAGGAACTT +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWRDKFP*SIAQEL
Trigger: AAGTTCCTGTGCTATTGAGCAAGGAAACTTATCTCT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAACCAAGCCTAGTAAAATaGTCATGTCCCTTATGGAAA +
Preference number: 4 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKPSLVK*SCPLWK
Trigger: TTTCCATAAGGGACATGAGCATTTTACTAGGCTTGG...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp ATGGATTTGTTAATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCACATTCTATCCTACTaGAAAACTTCTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: MDLLMDVTRQFLTLPTGTHILSY*KTSQDQ
Trigger: TTGATCCTGAGAAGTTTTCCAGTAGGATAGAATGTG...AGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCATTAACAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGCTGAGGTCATTGTTTaGGCTTTCACATTCTATCCT +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVAEVIV*AFTFYP
Trigger: AGGATAGAATGTGAAAGCCCAAACAATGACCTCAGC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCACGCGTTCTTTGTTaGAATGTTCTAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPRVLC*NVLGSL
Trigger: GAGGCTTCCTAGAACATTCCAACAAAGAACGCGTGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAAATGAGGCACTTCACTaGCTCCTTCTCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKNEALH*LLLHFL
Trigger: TAGGAAGTGGAGAAGGAGCCAGTGAAGTGCCTCATT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCTTTCAATGACCAGATaGAGGAGAACGATGAACAGA +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVLSMTR*RRTMNR
Trigger: TCTGTTCATCGTTCTCCTCCATCTGGTCATTGAAAG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGATTCTGGATGACTGGTaGCTGACAACTTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWILDDW*LTTFKY
Trigger: ATATTTGAAAGTTGTCAGCCACCAGTCATCCAGAAT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp AGGGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGTCTCATCATACATTGTaGATGTGCAAGACTCTAGTC +
Preference number: 4 (lower is better)
Translates to: REKPQVWWDLGDYRAIKRSHHTL*MCKTLV
Trigger: GACTAGAGTCTTGCACATCCACAATGTATGATGAGA...CCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp CCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATCTCCCCATCATCTACATaGTCCTCTAGTTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSMYHMAYECPYKLHLLISPSST*SSSFSG
Trigger: TCCAGAAAAACTAGAGGACCATGTAGATGATGGGGA...GATAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp TGCAATCATGTAGTCTCTTCTAAGGTAGAAAAGACAACAGAGTTTGACTCTATCTTCAGGGCTCGGCACTaGACAATAGAATCCATTTTT +
Preference number: 4 (lower is better)
Translates to: CNHVVSSKVEKTTEFDSIFRARH*TIESIF
Trigger: AAAAATGGATTCTATTGTTCAGTGCCGAGCCCTGAA...GATAGAGTCAAACTCTGTTGTCTTTTCTACCTTAGAAGAGACTACATGATTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGGAAACAGGGATCCCTaGAGAACTCTGTATACAAAC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKGNRDP*RTLYTN
Trigger: GTTTGTATACAGAGTTCTTCAGGGATCCCTGTTTCC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGAAGGAAATTCTGGATaGCTGGTGGCTGACAACTTT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKEGNSG*LVADNF
Trigger: AAAGTTGTCAGCCACCAGTCATCCAGAATTTCCTTC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp CCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATCGCAGTAATCAAATCCTaGCACACTACATCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: PSMYHMAYECPYKLHLLIAVIKS*HTTSSK
Trigger: TTTCGAAGATGTAGTGTGGCAGGATTTGATTACTGC...GATAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGTCAGTTCCAGGAACTaGTTTTGCAGACTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKVSSRN*FCRLSC
Trigger: GCAAGAAAGTCTGCAAAAGCAGTTCCTGGAACTGAC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTTCCATCTGGATCAGTaGAAAAGAGTAGTACCATGT +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVFHLDQ*KRVVPC
Trigger: ACATGGTACTACTCTTTTCCACTGATCCAGATGGAA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp CCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATCTTCCATCTGGATCAGTaGAAAAGAGTAGTACCATGT +
Preference number: 4 (lower is better)
Translates to: PSMYHMAYECPYKLHLLIFHLDQ*KRVVPC
Trigger: ACATGGTACTACTCTTTTCCACTGATCCAGATGGAA...GATAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp GAGTTTGACTCTATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGGCTGAGGTCATTGTTTaGGCTTTCACATTCTATCCT +
Preference number: 4 (lower is better)
Translates to: EFDSIIITRLFSHHTLWMAEVIV*AFTFYP
Trigger: AGGATAGAATGTGAAAGCCCAAACAATGACCTCAGC...CATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGATAGAGTCAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGTACAAAGTTTCCATTaGTGGATTTTGGATGGTCTC +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVVQSFH*WILDGL
Trigger: GAGACCATCCAAAATCCACCAATGGAAACTTTGTAC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTAATCCACAAAAGAACTaGTACCAGAAAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVNPQKN*YQKRRF
Trigger: GAACCTCCTTTTCTGGTACCAGTTCTTTTGTGGATT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGTGATCCAGAAGGTATaGGGTAAGTATGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKVIQKV*GKYASD
Trigger: ATCAGAGGCATACTTACCCCATACCTTCTGGATCAC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTGCAAGTTACACACATaGCTCCAAAAACTATGGCAA +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVCKLHT*LQKLWQ
Trigger: TTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACTTAGCTCTCAGAATTaGAGATGGAAACAGGGATCC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKLSSQN*RWKQGS
Trigger: GGATCCCTGTTTCCATCTCCAATTCTGAGAGCTAAG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAAATTCTGGATGACTGGTaGCTGACAACTTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKILDDW*LTTFKY
Trigger: ATATTTGAAAGTTGTCAGCCACCAGTCATCCAGAAT...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CCA 90 bp TGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATCTGACTACCTTCAATGTACCACATaGCCTATGAATGTCCCTATA +
Preference number: 4 (lower is better)
Translates to: CTTWPMNVPINYTCLSDYLQCTT*PMNVPI
Trigger: TATAGGGACATTCATAGGCCATGTGGTACATTGAAG...GTAGTCAGATAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp AAAAGGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGAAACCACAAGTTTGGTaGGATTTGGGAGATTACAGA +
Preference number: 4 (lower is better)
Translates to: KRPSMYHMAYECPYKLHLKPQVW*DLGDYR
Trigger: TCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTT...CAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CCA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCAGGCATCTTTACTTTaGGTATTGAGGATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVQASLL*VLRIKS
Trigger: GCTTTTTATCCTCAATACCCAAAGTAAAGATGCCTG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCCAGTAATCAGTCATaGATGTTCCTGAAAATCCAC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPSNQS*MFLKIH
Trigger: GTGGATTTTCAGGAACATCCATGACTGATTACTGGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp ATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGTGCAAGACTCTAGAAAAACCACAAGTTTaGTGGGATTTGGGAGATTAC +
Preference number: 4 (lower is better)
Translates to: IIITRLFSHHTLWMCKTLEKPQV*WDLGDY
Trigger: GTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTC...TAGAGTCTTGCACATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504445.1
3UTR CAA 72 bp CTGACACTTCCCACTGGAACTCATGAACACATTCTGTaGAGCTCTGAAATTGATATATTAGAAAATGACCTT +
Preference number: 4 (lower is better)
Translates to: LTLPTGTHEHIL*SSEIDILENDL
Trigger: AAGGTCATTTTCTAATATATCAATTTCAGAGCTCAACAGAATGTGTTCATGAGTTCCAGTGGGAAGTGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp TCTGAAATTGATATATTAGAAAATGACCTTCTGGAGCCAGGAATAGGGAAAAACACAAATTTTCTTTACTaGGACCCACGCGTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SEIDILENDLLEPGIGKNTNFLY*DPRVLC
Trigger: ACAAAGAACGCGTGGGTCTCAGTAAAGAAAATTTGT...GTTTTTCCCTATTCCTGGCTCCAGAAGGTCATTTTCTAATATATCAATTTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAAGTCATGGATGTTCCTaGAAATCCACAAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKSHGCS*KSTKEL
Trigger: CAGTTCTTTTGTGGATTTTCAGGAACATCCATGACT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAAAAGATGTCAGTATCTaGGCCCTGGTAGGTAAAATA +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKKDVSI*ALVGKI
Trigger: TATTTTACCTACCAGGGCTCAGATACTGACATCTTT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAAGGAAAACATTGAAATaGGTGAGAGGTATGCCTACA +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKRKTLK*VRGMPT
Trigger: TGTAGGCATACCTCTCACTCATTTCAATGTTTTCCT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGTTAGTCTGTCAAAGTaGTTAGCTCTCAGAATTGGA +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKVSLSK*LALRIG
Trigger: TCCAATTCTGAGAGCTAAGCACTTTGACAGACTAAC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAATTGATTGTATCACTTTaGTCAGGCTACTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKLIVSL*SGYCQF
Trigger: AAACTGACAGTAGCCTGATCAAAGTGATACAATCAA...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAAGCTATGTGAGATTTTaGAAGTTCTCGAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKSYVRF*KFSKSA
Trigger: AGCTGATTTCGAGAACTTTCAAAATCTCACATAGCT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR TCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACTTCCATTAGCTATGTaGGATTTTGAAAGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKLPLAM*DFESSR
Trigger: TCGAGAACTTTCAAAATCTCACATAGCTAATGGAAG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAAGAGATAAGTTTCCTTaGTCAATAGCACAGGAACTT +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKRDKFP*SIAQEL
Trigger: AAGTTCCTGTGCTATTGAGCAAGGAAACTTATCTCT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR GCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAAAAACAAGTCATTCTTaGTTGGAGAGATACCTCTTC +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKKTSHS*LERYLF
Trigger: GAAGAGGTATCTCTCCAAGCAAGAATGACTTGTTTT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACACATTCTATCCTACTaGAAAACTTCTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKHILSY*KTSQDQ
Trigger: TTGATCCTGAGAAGTTTTCCAGTAGGATAGAATGTG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACAAGTCATTCTTGCTTaGAGAGATACCTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKQVILA*RDTSSK
Trigger: TTTTGAAGAGGTATCTCTCCAAGCAAGAATGACTTG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CCA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCTTCAAGTGGTCTCTaGAAGATTGTTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPSSGL*KIVLKL
Trigger: CAATTTCAAAACAATCTTCCAGAGACCACTTGAAGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS TCA 90 bp ACATCTCCCAAACTCAGCTGCGGGAGCCAGCGCCGGAGCCTGTGCTaGGCTCGCAACCTACTTCTCCCTCCGCTCCTCCTCCCGTCTCCG +
Preference number: 5 (lower is better)
Translates to: TSPKLSCGSQRRSLC*ARNLLLPPLLLPSP
Trigger: CGGAGACGGGAGGAGGAGCGGAGGGAGAAGTAGGTTGCGAGCTCAGCACAGGCTCCGGCGCTGGCTCCCGCAGCTGAGTTTGGGAGATGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS CCA 90 bp CGCTTCGTCTGGGCTCTCGGCCTCATAACACAGGTTGCAGGCCAATaGCTGTCCAGGGAGGGACTCTGCCTTGCCATTCAGGAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RFVWALGLITQVAGQ*LSREGLCLAIQEAC
Trigger: GCAGGCCTCCTGAATGGCAAGGCAGAGTCCCTCCCTGGACAGCCATTGGCCTGCAACCTGTGTTATGAGGCCGAGAGCCCAGACGAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS TCA 90 bp GGACTTGCGCCCACAGGCGAGCAACGAGGAATAGTTGTATGGCCCTaGATCATCATCCCTGGTTGCACCTCTGATCAGCCGTCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GLAPTGEQRGIVVWP*IIIPGCTSDQPSPV
Trigger: CACTGGCGACGGCTGATCAGAGGTGCAACCAGGGATGATGATTCAGGGCCATACAACTATTCCTCGTTGCTCGCCTGTGGGCGCAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS TCA 90 bp GAGGCCTGCATCACCGTGTTGTTTCTCTGTTTCTGTGCAGCAAGCTaGGCTACTGGAGCACTGGGGGCTCTCACACACCTGGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: EACITVLFLCFCAAS*ATGALGALTHLGDL
Trigger: GAGGTCTCCCAGGTGTGTGAGAGCCCCCAGTGCTCCAGTAGCTCAGCTTGCTGCACAGAAACAGAGAAACAACACGGTGATGCAGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS TCA 90 bp ATCCTTGAAGGGCTGGATGTGGGGAACAACAATCCGGTGCCTTCCTaGCAGTTTAGGGGTCTGAGAGGACTTGCGCCCACAGGCGAGCAA +
Preference number: 5 (lower is better)
Translates to: ILEGLDVGNNNPVPS*QFRGLRGLAPTGEQ
Trigger: TTGCTCGCCTGTGGGCGCAAGTCCTCTCAGACCCCTAAACTGTCAGGAAGGCACCGGATTGTTGTTCCCCACATCCAGCCCTTCAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS CCA 90 bp TGTTGTTTCTCTGTTTCTGTGCAGCAAGCTGAGCTACTGGAGCACTaGGGGCTCTCACACACCTGGGAGACCTCTTCCTCCACAGGTGAA +
Preference number: 5 (lower is better)
Translates to: CCFSVSVQQAELLEH*GLSHTWETSSSTGE
Trigger: TTCACCTGTGGAGGAAGAGGTCTCCCAGGTGTGTGAGAGCCCCCAGTGCTCCAGTAGCTCAGCTTGCTGCACAGAAACAGAGAAACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS TCA 90 bp CCTGAATCATCATCCCTGGTTGCACCTCTGATCAGCCGTCGCCAGTaGTATCTGGCCCATTGGAGAGCCTCAGTCATATCCAAACTGTGG +
Preference number: 5 (lower is better)
Translates to: PESSSLVAPLISRRQ*YLAHWRASVISKLW
Trigger: CCACAGTTTGGATATGACTGAGGCTCTCCAATGGGCCAGATATCACTGGCGACGGCTGATCAGAGGTGCAACCAGGGATGATGATTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS TCA 90 bp AGGAATAGTTGTATGGCCCTGAATCATCATCCCTGGTTGCACCTCTaGTCAGCCGTCGCCAGTGATATCTGGCCCATTGGAGAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: RNSCMALNHHPWLHL*SAVASDIWPIGEPQ
Trigger: CTGAGGCTCTCCAATGGGCCAGATATCACTGGCGACGGCTGATCAGAGGTGCAACCAGGGATGATGATTCAGGGCCATACAACTATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS-3UTR CAA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAAGCAGCAGACCACAGCTaGACACCAAGATGTCAGTTC +
Preference number: 5 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKAADHS*TPRCQF
Trigger: GAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTGC...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS TCA 90 bp CGAGTCGCAAGGTACAAGAAAAGAGCTAAGCACAAATTCGAAGAGTaGAAGCGGGTTGTGCTTCCACGCCAGCCATTTGCCTTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: RVARYKKRAKHKFEE*KRVVLPRQPFAFRE
Trigger: TTCCCGGAAGGCAAATGGCTGGCGTGGAAGCACAACCCGCTTTCACTCTTCGAATTTGTGCTTAGCTCTTTTCTTGTACCTTGCGACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS CCA 90 bp TGTGAGTCACTGCACCTGGTCAAACTCTTGCTTTCAATGACCAGATaGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: CESLHLVKLLLSMTR*RRTMNRAAVFRGFP
Trigger: TGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTCATTGAAAGCAAGAGTTTGACCAGGTGCAGTGACTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512393.1
CDS TCA 90 bp TTCGATTGTTCACATAGGCTCCGGAGAACTTCTCATACTCATCCTTaGAGGGCTGGATGTGGGGAACAACAATCCGGTGCCTTCCTGACA +
Preference number: 5 (lower is better)
Translates to: FDCSHRLRRTSHTHP*RAGCGEQQSGAFLT
Trigger: TGTCAGGAAGGCACCGGATTGTTGTTCCCCACATCCAGCCCTTCAAGGATGAGTATGAGAAGTTCTCCGGAGCCTATGTGAACAATCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS TCA 90 bp GTAGGAGTTGAAATGTTAATGGTCCCAAAGCAGCAAAGTCCACCATaGCCTGCTCTGGTGTCCGAGACCGTAAAGTGCATTGGTAAGCCC +
Preference number: 5 (lower is better)
Translates to: VGVEMLMVPKQQSPP*PALVSETVKCIGKP
Trigger: GGGCTTACCAATGCACTTTACGGTCTCGGACACCAGAGCAGGTCATGGTGGACTTTGCTGCTTTGGGACCATTAACATTTCAACTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp ATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTGCAGGGATGACCTCGTaGCAGGAGAGGCGAATAAAG +
Preference number: 5 (lower is better)
Translates to: MDVTRQFLTLPTGTHEHIAGMTS*QERRIK
Trigger: CTTTATTCGCCTCTCCTGCAACGAGGTCATCCCTGC...AATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp GACCAGATGGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGGGGGTTTCCAAACCAAGTAATGTAAGTTaGTTCTCCAACCTCATGGCA +
Preference number: 5 (lower is better)
Translates to: DQMEENDEQSGCVQGVSKPSNVS*FSNLMA
Trigger: TGCCATGAGGTTGGAGAACAAACTTACATTACTTGG...TTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CAA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGGTAAAGTTCAGGCAGTaGCATGAGGGTCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWVKFRQ*HEGLCR
Trigger: TCTGCAGAGACCCTCATGCAACTGCCTGAACTTTAC...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGCCCCTCTCCACTTCTaGAGAGCTTTAGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KAPPQENIEMSERYAYIFAPLHF*RALVLS
Trigger: GGAGAGGACTAAAGCTCTCAAGAAGTGGAGAGGGGC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS TCA 90 bp ATGTGCAAGACTCTAGTCATGCATTCATACTTACAATGGGGCTACTaGAAGCAGCCTGTCTGGAATGAGGCACTTCACTGGCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: MCKTLVMHSYLQWGY*KQPVWNEALHWLLL
Trigger: GAGAAGGAGCCAGTGAAGTGCCTCATTCCAGACAGGCTGCTTTCAGTAGCCCCATTGTAAGTATGAATGCATGACTAGAGTCTTGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS CCA 90 bp TGGTTTCATTCGACTAAAGAGAGGGAGTCTGCTCACAAAGGCGTTTaGAACTCCAGAAGATGGCTCTTTCCCACTGTTAAGCGATGGAGA +
Preference number: 5 (lower is better)
Translates to: WFHSTKERESAHKGV*NSRRWLFPTVKRWR
Trigger: TCTCCATCGCTTAACAGTGGGAAAGAGCCATCTTCTGGAGTTCCAAACGCCTTTGTGAGCAGACTCCCTCTCTTTAGTCGAATGAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCTCGGTTTTGCCATATaGCTGAGGGAACCACTGACT +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGLGFAI*LREPLT
Trigger: AGTCAGTGGTTCCCTCAGCAATATGGCAAAACCGAG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGATCTTTTGTCGGGGTaGGTTAGGAGCAGAAACCAC +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGDLLSG*VRSRNH
Trigger: GTGGTTTCTGCTCCTAACCAACCCCGACAAAAGATC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCAGGGTGTCTGATCTTTaGTCGGGGTTGGTTAGGAGC +
Preference number: 5 (lower is better)
Translates to: KAPPQENIEMSERYAYIFRVSDL*SGLVRS
Trigger: GCTCCTAACCAACCCCGACAAAAGATCAGACACCCT...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCGTTGTTTCTCCAGACTaGCTCCATCTGGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: KAPPQENIEMSERYAYIFVVSPD*LHLGKP
Trigger: TGGCTTCCCCAGATGGAGCAAGTCTGGAGAAACAAC...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGCTTTTGCAGACTTTCTaGCAGGGCAAACTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVLLQTF*QGKLQG
Trigger: ACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAAG...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS GCA 90 bp TCAGGATCAACTTCAGAGTCCTGTTCTGCATATCCCCGAACCACCTaGCTCTGTTTTAAATTGCTCTCTCCATCAAGACCAGAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: SGSTSESCSAYPRTT*LCFKLLSPSRPEVS
Trigger: TGAGACTTCTGGTCTTGATGGAGAGAGCAATTTAAAACAGAGGCAGGTGGTTCGGGGATATGCAGAACAGGACTCTGAAGTTGATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000504445.1
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCAGACCCACGCGTTCTTaGTTGGAATGTTCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGRPTRS*LECSRK
Trigger: CTTCCTAGAACATTCCAACAAAGAACGCGTGGGTCT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCTACCGTGGCCCACTGTaGTTCAGCATTGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: KAPPQENIEMSERYAYIFYRGPL*FSIALV
Trigger: AACCAAAGCAATGCTGAACAACAGTGGGCCACGGTA...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp ATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTTACCGTGGCCCACTGTaGTTCAGCATTGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: MDVTRQFLTLPTGTHEHIYRGPL*FSIALV
Trigger: AACCAAAGCAATGCTGAACAACAGTGGGCCACGGTA...AATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGCTCTTCTTTCTAATTaGCTGCGCTTATACCGTGGC +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGALLSN*LRLYRG
Trigger: GCCACGGTATAAGCGCAGCAAATTAGAAAGAAGAGC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp ATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCATGAACACATTCTCGGTTTTGCCATATaGCTGAGGGAACCACTGACT +
Preference number: 5 (lower is better)
Translates to: MDVTRQFLTLPTGTHEHILGFAI*LREPLT
Trigger: AGTCAGTGGTTCCCTCAGCAATATGGCAAAACCGAG...AATGTGTTCATGAGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGGGAGGGACTCTGCCTaGCCATTCAGGAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKGRDSA*PFRRPA
Trigger: TGCAGGCCTCCTGAATGGCAAGGCAGAGTCCCTCCC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCGTATACACCACAACTaGATTGGAAAGAGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGRIHHN*IGKRVS
Trigger: CGACACCCTCTTTCCAATCAAGTTGTGGTGTATACG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGCAGCAGACCACAGCTaGACACCAAGATGTCAGTTC +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWAADHS*TPRCQF
Trigger: GAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTGC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGGATGTGAAGAGGAGGTaGAAGAAGATCAAAACCCAG +
Preference number: 5 (lower is better)
Translates to: IAQELADFIANTAEGPGMDVKRR*KKIKTQ
Trigger: CTGGGTTTTGATCTTCTTCAACCTCCTCTTCACATC...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTAAGAGTGAAAGCGGGTaGTGCTTCCACGCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVKSESG*CFHASH
Trigger: ATGGCTGGCGTGGAAGCACAACCCGCTTTCACTCTT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp TGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATCTGACTACAAGAGTGAAAGCGGGTaGTGCTTCCACGCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: CTTWPMNVPINYTCLSDYKSESG*CFHASH
Trigger: ATGGCTGGCGTGGAAGCACAACCCGCTTTCACTCTT...GTAGTCAGATAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGTTCTCATACTCATCCTaGAAGGGCTGGATGTGGGGA +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWFSYSS*KGWMWG
Trigger: TCCCCACATCCAGCCCTTCAAGGATGAGTATGAGAA...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGCAGGGATGACCTCGTaGCAGGAGAGGCGAATAAAG +
Preference number: 5 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVAGMTS*QERRIK
Trigger: CTTTATTCGCCTCTCCTGCAACGAGGTCATCCCTGC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp ATGGATTTGTTAATGGATGTGACTAGACAGTTCCTGACACTTCCCACTGGAACTCCCACGCGTTCTTTGTaGGAATGTTCTAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: MDLLMDVTRQFLTLPTGTPTRSL*ECSRKP
Trigger: AGGCTTCCTAGAACATTCCAACAAAGAACGCGTGGG...AGTTCCAGTGGGAAGTGTCAGGAACTGTCTAGTCACATCCATTAACAAATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACTCCCAGCAAGATGATTaGAGGGCTTATTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNSQQDD*RAYFPK
Trigger: CTTTGGGAAATAAGCCCTCAAATCATCTTGCTGGGA...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCCGTATACACCACAACTaGATTGGAAAGAGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: KAPPQENIEMSERYAYIFRIHHN*IGKRVS
Trigger: CGACACCCTCTTTCCAATCAAGTTGTGGTGTATACG...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp ATAGCACAGGAACTTGCTGACTTCATTGCAAATACAGCAGAAGGGCCAGGCATGAGTAATTCTTCCCTGTaGTCAATGCTGGTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: IAQELADFIANTAEGPGMSNSSL*SMLVSA
Trigger: AGCTGAAACCAGCATTGACAACAGGGAAGAATTACT...CATGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGTAAAGTTCAGGCAGTaGCATGAGGGTCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWVKFRQ*HEGLCR
Trigger: TCTGCAGAGACCCTCATGCAACTGCCTGAACTTTAC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGAACTTGCTGACTTCATaGCAAATACAGCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVNLLTS*QIQQKG
Trigger: GCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTT...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CAA 90 bp GTAGAATACTGGATCCAGCATGTGCTCCTGCATAATCCAGTAAGGGTTGGATGGACCTTGAAAGAATACTaGCAACTCCAAGGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: VEYWIQHVLLHNPVRVGWTLKEY*QLQGGY
Trigger: ATACCCTCCTTGGAGTTGCAAGTATTCTTTCAAGGT...CCATCCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS CCA 90 bp CCACTGTTAAGCGATGGAGAACTTGATCTTCGGACAGACCATCTCTaGAAAAGACTTTTAATCTCTTCCAAAGACTTAATGGGCAACCCC +
Preference number: 5 (lower is better)
Translates to: PLLSDGELDLRTDHL*KRLLISSKDLMGNP
Trigger: GGGGTTGCCCATTAAGTCTTTGGAAGAGATTAAAAGTCTTTTCCAGAGATGGTCTGTCCGAAGATCAAGTTCTCCATCGCTTAACAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCTCCCAGCAAGATGATTaGAGGGCTTATTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: KAPPQENIEMSERYAYIFSQQDD*RAYFPK
Trigger: CTTTGGGAAATAAGCCCTCAAATCATCTTGCTGGGA...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGAAACCACTACTGTGTaGCAAATTGCCAATGCAATG +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGETTTV*QIANAM
Trigger: CATTGCATTGGCAATTTGCAACACAGTAGTGGTTTC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCCAAGTAATGTAAGTTaGTTCTCCAACCTCATGGCA +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGPSNVS*FSNLMA
Trigger: TGCCATGAGGTTGGAGAACAAACTTACATTACTTGG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp AACTCTGTATACAAACCTGGGCAGAAGAGCAATGGACGTCGTGAGGATACAAACATCCAAGTCAAACTCTaGCTTTCAATGACCAGATGG +
Preference number: 5 (lower is better)
Translates to: NSVYKPGQKSNGRREDTNIQVKL*LSMTRW
Trigger: CCATCTGGTCATTGAAAGCAAGAGTTTGACTTGGAT...GTTTGTATCCTCACGACGTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS TCA 90 bp AACTCCAGAAGATGGCTCTTTCCCACTGTTAAGCGATGGAGAACTTaGTCTTCGGACAGACCATCTCTGGAAAAGACTTTTAATCTCTTC +
Preference number: 5 (lower is better)
Translates to: NSRRWLFPTVKRWRT*SSDRPSLEKTFNLF
Trigger: GAAGAGATTAAAAGTCTTTTCCAGAGATGGTCTGTCCGAAGATCAAGTTCTCCATCGCTTAACAGTGGGAAAGAGCCATCTTCTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTACACATCACAGCATGTaGGTCACGAGTCGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVTHHSM*VTSRKV
Trigger: TACCTTGCGACTCGTGACCAACATGCTGTGATGTGT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCATGGTGATTTCCTTTaGGAAGGCTTCTACCAAAGG +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWHGDFL*EGFYQR
Trigger: CCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCATG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCTCGGTTTTGCCATATaGCTGAGGGAACCACTGACT +
Preference number: 5 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVLGFAI*LREPLT
Trigger: AGTCAGTGGTTCCCTCAGCAATATGGCAAAACCGAG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGGATGTGAAGAGGAGGTaGAAGAAGATCAAAACCCAG +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWDVKRR*KKIKTQ
Trigger: CTGGGTTTTGATCTTCTTCAACCTCCTCTTCACATC...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGCCCCTCTCCACTTCTaGAGAGCTTTAGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKAPLHF*RALVLS
Trigger: GGAGAGGACTAAAGCTCTCAAGAAGTGGAGAGGGGC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGACAAGTCATTCTTGCTaGGAGAGATACCTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVTSHSC*ERYLFK
Trigger: TTTGAAGAGGTATCTCTCCAAGCAAGAATGACTTGT...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CAA 90 bp ATCATAATTACAAGGCTGTTCTCTCATCATACATTGTGGATGTGCAAGACTCTAACACATCACAGCATGTaGGTCACGAGTCGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: IIITRLFSHHTLWMCKTLTHHSM*VTSRKV
Trigger: TACCTTGCGACTCGTGACCAACATGCTGTGATGTGT...TAGAGTCTTGCACATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCGAAGTGTGTACTTTGTaGTTCGTATTCGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGEVCTL*FVFDCS
Trigger: TGAACAATCGAATACGAACAACAAAGTACACACTTC...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTACATGGTGATTTCCTTTaGGAAGGCTTCTACCAAAGG +
Preference number: 5 (lower is better)
Translates to: GLQCTTWPMNVPINYTCLHGDFL*EGFYQR
Trigger: CCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCATG...TAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp AAAAGGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGAGACCCACGCGTTCTTaGTTGGAATGTTCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: KRPSMYHMAYECPYKLHLRPTRS*LECSRK
Trigger: CTTCCTAGAACATTCCAACAAAGAACGCGTGGGTCT...CAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAGTTGTTTCTCCAGACTaGCTCCATCTGGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKVVSPD*LHLGKP
Trigger: TGGCTTCCCCAGATGGAGCAAGTCTGGAGAAACAAC...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAGTAATTCTTCCCTGTaGTCAATGCTGGTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWSNSSL*SMLVSA
Trigger: AGCTGAAACCAGCATTGACAACAGGGAAGAATTACT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGCCCAATGTCTGCCACTaGTATCATGCTAACATCATT +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWPNVCH*YHANII
Trigger: AATGATGTTAGCATGATACAAGTGGCAGACATTGGG...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGATCCAAGTCAAACTCTaGCTTTCAATGACCAGATGG +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWIQVKL*LSMTRW
Trigger: CCATCTGGTCATTGAAAGCAAGAGTTTGACTTGGAT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGACCTTGAAAGAATACTaGCAACTCCAAGGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWTLKEY*QLQGGY
Trigger: ATACCCTCCTTGGAGTTGCAAGTATTCTTTCAAGGT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCCCTATTTTAGGTACCTaGTTGTTTAAAAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGPILGT*LFKRLL
Trigger: CAAGAGCCTTTTAAACAACAAGGTACCTAAAATAGG...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GATCAGGCTACTGTCAGTTTTAAAATACAGGAAATCACCCAATGGGCCACAGGCATTGATTGTATCACTTaGATCAGGCTACTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: DQATVSFKIQEITQWATGIDCIT*IRLLSV
Trigger: AACTGACAGTAGCCTGATCAAAGTGATACAATCAAT...GCCTGTGGCCCATTGGGTGATTTCCTGTATTTTAAAACTGACAGTAGCCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GATCACAGAATCAGCGCCTTTCGTATACACCACAACTTGATTGGAAAGAGGGTGATTGATTGTATCACTTaGATCAGGCTACTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: DHRISAFRIHHNLIGKRVIDCIT*IRLLSV
Trigger: AACTGACAGTAGCCTGATCAAAGTGATACAATCAAT...CACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCTCAGAAGTGTGTACTTaGTTGTTCGTATTCGATTGT +
Preference number: 5 (lower is better)
Translates to: KAPPQENIEMSERYAYIFSEVCT*LFVFDC
Trigger: ACAATCGAATACGAACAACAAAGTACACACTTCTGA...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCCACGCGTTCTTTGTaGGAATGTTCTAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPTRSL*ECSRKP
Trigger: AGGCTTCCTAGAACATTCCAACAAAGAACGCGTGGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp TGCAATCATGTAGTCTCTTCTAAGGTAGAAAAGACAACAGAGTTTGACTCTATCGCTCTTCTTTCTAATTaGCTGCGCTTATACCGTGGC +
Preference number: 5 (lower is better)
Translates to: CNHVVSSKVEKTTEFDSIALLSN*LRLYRG
Trigger: GCCACGGTATAAGCGCAGCAAATTAGAAAGAAGAGC...GATAGAGTCAAACTCTGTTGTCTTTTCTACCTTAGAAGAGACTACATGATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAGAGGACATCTGTGTTaGCTCTTCTTTCTAATTTGC +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWRGHLC*LFFLIC
Trigger: GCAAATTAGAAAGAAGAGCAAACACAGATGTCCTCT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GGAAAAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCAGAGGACATCTGTGTTaGCTCTTCTTTCTAATTTGC +
Preference number: 5 (lower is better)
Translates to: GKTTSLVGFGRLQSNKKARGHLC*LFFLIC
Trigger: GCAAATTAGAAAGAAGAGCAAACACAGATGTCCTCT...GGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp AAGGCTCCACCTCAGGAAAACATTGAAATGAGTGAGAGGTATGCCTACATCTTCACAGGCATCTTTACTTaGGGTATTGAGGATAAAAAG +
Preference number: 5 (lower is better)
Translates to: KAPPQENIEMSERYAYIFTGIFT*GIEDKK
Trigger: CTTTTTATCCTCAATACCCAAAGTAAAGATGCCTGT...GAAGATGTAGGCATACCTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACTTTTGCAGACTTTCTaGCAGGGCAAACTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKLLQTF*QGKLQG
Trigger: ACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAAG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp TTGGATGGTGGGTTGCAAGTTACACACATGGCTCCAAAAACTATGGCAAATAAACCCAATGTCTGCCACTaGTATCATGCTAACATCATT +
Preference number: 5 (lower is better)
Translates to: LDGGLQVTHMAPKTMANKPNVCH*YHANII
Trigger: AATGATGTTAGCATGATACAAGTGGCAGACATTGGG...TTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCATCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503288.6
CDS-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTAACTTGCTGACTTCATaGCAAATACAGCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVNLLTS*QIQQKG
Trigger: GCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTT...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGTCAGTTTTCAGAGGTTaGGAGATTTTGGAATTGTGG +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWSVFRG*EILELW
Trigger: CCACAATTCCAAAATCTCCAAACCTCTGAAAACTGA...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp CTGAGCTGCAATCATGTAGTCTCTTCTAAGGTAGAAAAGACAACAGAGTTTGACTTATGTGTGGTGATCTaGCTGAGCTGCAATCATGTA +
Preference number: 5 (lower is better)
Translates to: LSCNHVVSSKVEKTTEFDLCVVI*LSCNHV
Trigger: TACATGATTGCAGCTCAGCAAGATCACCACACATAA...GTCAAACTCTGTTGTCTTTTCTACCTTAGAAGAGACTACATGATTGCAGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp AAACCACAAGTTTGGTGGGATTTGGGAGATTACAGAGCAATAAAAAGGCCTTCAGGAAAAACCACAAGTTaGGTGGGATTTGGGAGATTA +
Preference number: 5 (lower is better)
Translates to: KPQVWWDLGDYRAIKRPSGKTTS*VGFGRL
Trigger: TAATCTCCCAAATCCCACCAAACTTGTGGTTTTTCC...TGAAGGCCTTTTTATTGCTCTGTAATCTCCCAAATCCCACCAAACTTGTGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS GCA 90 bp GGGTTGGTTAGGAGCAGAAACCACTACTGTGTTGCAAATTGCCAATaGAATGAAAAAGTCGATAATGTACAAAGTTTCCATTGGTGGATT +
Preference number: 5 (lower is better)
Translates to: GLVRSRNHYCVANCQ*NEKVDNVQSFHWWI
Trigger: AATCCACCAATGGAAACTTTGTACATTATCGACTTTTTCATTGCATTGGCAATTTGCAACACAGTAGTGGTTTCTGCTCCTAACCAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTTGCCTCTGTTTTAAATaGCTCTCTCCATCAAGACCA +
Preference number: 5 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVCLCFK*LSPSRP
Trigger: TGGTCTTGATGGAGAGAGCAATTTAAAACAGAGGCA...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS-3UTR CAA 90 bp TGCAATCATGTAGTCTCTTCTAAGGTAGAAAAGACAACAGAGTTTGACTCTATCTCCCAGCAAGATGATTaGAGGGCTTATTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: CNHVVSSKVEKTTEFDSISQQDD*RAYFPK
Trigger: CTTTGGGAAATAAGCCCTCAAATCATCTTGCTGGGA...GATAGAGTCAAACTCTGTTGTCTTTTCTACCTTAGAAGAGACTACATGATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTGAAGTTCTTTCAAAATaGTGCTCATCAGCATCCCAC +
Preference number: 5 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVEVLSK*CSSASH
Trigger: GTGGGATGCTGATGAGCACAATTTTGAAAGAACTTC...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAATTGCTCTGGCAGGGCTaGAGTTTTCTTCTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKLLWQG*SFLLKF
Trigger: GAACTTCAGAAGAAAACTCAAGCCCTGCCAGAGCAA...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GACCTTGATGTAGACATTGCATATGAGCATGGAGATTCAGGAAGGAAATTCTGGAAAAACAAGTCATTCTaGCTTGGAGAGATACCTCTT +
Preference number: 5 (lower is better)
Translates to: DLDVDIAYEHGDSGRKFWKNKSF*LGEIPL
Trigger: AAGAGGTATCTCTCCAAGCAAGAATGACTTGTTTTT...CCAGAATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp GGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTATTCTCTCATCATACATaGTGGATGTGCAAGACTCTA +
Preference number: 5 (lower is better)
Translates to: GLQCTTWPMNVPINYTCLFSHHT*WMCKTL
Trigger: TAGAGTCTTGCACATCCACAATGTATGATGAGAGAA...TAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS GCA 90 bp TTTGTCAATTTTGTATTTCCGATAATCTTCCAGGCCATCTTTAATTaGGATAATTGTAAGGACCACCACCAGAGGCAACATGGTGATTTC +
Preference number: 5 (lower is better)
Translates to: FVNFVFPIIFQAIFN*DNCKDHHQRQHGDF
Trigger: GAAATCACCATGTTGCCTCTGGTGGTGGTCCTTACAATTATCGCAATTAAAGATGGCCTGGAAGATTATCGGAAATACAAAATTGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000504445.1
CDS CCA 90 bp TTTGACTCTATCATAATTACAAGGCTGTTCTCTCATCATACATTGTaGATGTGCAAGACTCTAGTCATGCATTCATACTTACAATGGGGC +
Preference number: 5 (lower is better)
Translates to: FDSIIITRLFSHHTL*MCKTLVMHSYLQWG
Trigger: GCCCCATTGTAAGTATGAATGCATGACTAGAGTCTTGCACATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGATAGAGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp GGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGCTTAGAAGTGTGTACTTTGTaGTTCGTATTCGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: GLQCTTWPMNVPINYTCLEVCTL*FVFDCS
Trigger: TGAACAATCGAATACGAACAACAAAGTACACACTTC...TAAGCAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAACCTTACTATCATCTGTaGTTTCTCCAGACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKPYYHL*FLQTCS
Trigger: GGAGCAAGTCTGGAGAAACAACAGATGATAGTAAGG...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp AAAAGGCCTTCAATGTACCACATGGCCTATGAATGTCCCTATAAATTACACTTGTCAGAAGTGTGTACTTaGTTGTTCGTATTCGATTGT +
Preference number: 5 (lower is better)
Translates to: KRPSMYHMAYECPYKLHLSEVCT*LFVFDC
Trigger: ACAATCGAATACGAACAACAAAGTACACACTTCTGA...CAAGTGTAATTTATAGGGACATTCATAGGCCATGTGGTACATTGAAGGCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp ATGAATGTCCCTATAAATTACACTTGCTTATCTGACTACGAGATAACTCTGGTATGCCTCTGTTTTAAATaGCTCTCTCCATCAAGACCA +
Preference number: 5 (lower is better)
Translates to: MNVPINYTCLSDYEITLVCLCFK*LSPSRP
Trigger: TGGTCTTGATGGAGAGAGCAATTTAAAACAGAGGCA...TACCAGAGTTATCTCGTAGTCAGATAAGCAAGTGTAATTTATAGGGACATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS-3UTR CAA 90 bp GTCTCAGGGTATTGTAAAAACTATGAACCTTCAAGTGGTCTCTGGAAGATTGTTCCTATTTTAGGTACCTaGTTGTTTAAAAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: VSGYCKNYEPSSGLWKIVPILGT*LFKRLL
Trigger: CAAGAGCCTTTTAAACAACAAGGTACCTAAAATAGG...AACAATCTTCCAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAACAAGTCATTCTTGCTaGGAGAGATACCTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKTSHSC*ERYLFK
Trigger: TTTGAAGAGGTATCTCTCCAAGCAAGAATGACTTGT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS-3UTR CAA 90 bp ATATCTCATATTTTAGAGGCTCCAACACCTGAAAAGTCTCAGGGTATTGTAAAAACAGGCATCTTTACTTaGGGTATTGAGGATAAAAAG +
Preference number: 5 (lower is better)
Translates to: ISHILEAPTPEKSQGIVKTGIFT*GIEDKK
Trigger: CTTTTTATCCTCAATACCCAAAGTAAAGATGCCTGT...TTTTACAATACCCTGAGACTTTTCAGGTGTTGGAGCCTCTAAAATATGAGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000503288.6
CDS CCA 72 bp TGGGCTCTCGGCCTCATAACACAGGTTGCAGGCCAATaGCTGTCCAGGGAGGGACTCTGCCTTGCCATTCAG +
Preference number: 6 (lower is better)
Translates to: WALGLITQVAGQ*LSREGLCLAIQ
Trigger: CTGAATGGCAAGGCAGAGTCCCTCCCTGGACAGCCATTGGCCTGCAACCTGTGTTATGAGGCCGAGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS TCA 72 bp GGGCTGGATGTGGGGAACAACAATCCGGTGCCTTCCTaGCAGTTTAGGGGTCTGAGAGGACTTGCGCCCACA +
Preference number: 6 (lower is better)
Translates to: GLDVGNNNPVPS*QFRGLRGLAPT
Trigger: TGTGGGCGCAAGTCCTCTCAGACCCCTAAACTGTCAGGAAGGCACCGGATTGTTGTTCCCCACATCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS CCA 72 bp CTGGTGTCCGAGACCGTAAAGTGCATTGGTAAGCCCTaGCGGCATACACTAAGGCCGCTTCGTCTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: LVSETVKCIGKP*RHTLRPLRLGS
Trigger: AGAGCCCAGACGAAGCGGCCTTAGTGTATGCCGCCAGGGCTTACCAATGCACTTTACGGTCTCGGACACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS CCA 72 bp TTGGGCTCAAGTGAGCCTCCTCCTCAGTCTCCCAAGTaGCCAAGACTGCTGGCAGGTGCCATGACACACAGT +
Preference number: 6 (lower is better)
Translates to: LGSSEPPPQSPK*PRLLAGAMTHS
Trigger: ACTGTGTGTCATGGCACCTGCCAGCAGTCTTGGCCACTTGGGAGACTGAGGAGGAGGCTCACTTGAGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512393.1
CDS TCA 72 bp ACAACAATCCGGTGCCTTCCTGACAGTTTAGGGGTCTaGGAGGACTTGCGCCCACAGGCGAGCAACGAGGAA +
Preference number: 6 (lower is better)
Translates to: TTIRCLPDSLGV*EDLRPQASNEE
Trigger: TTCCTCGTTGCTCGCCTGTGGGCGCAAGTCCTCTCAGACCCCTAAACTGTCAGGAAGGCACCGGATTGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS TCA 72 bp TCATCCCTGGTTGCACCTCTGATCAGCCGTCGCCAGTaGTATCTGGCCCATTGGAGAGCCTCAGTCATATCC +
Preference number: 6 (lower is better)
Translates to: SSLVAPLISRRQ*YLAHWRASVIS
Trigger: GGATATGACTGAGGCTCTCCAATGGGCCAGATATCACTGGCGACGGCTGATCAGAGGTGCAACCAGGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS TCA 72 bp CCCACAGGCGAGCAACGAGGAATAGTTGTATGGCCCTaGATCATCATCCCTGGTTGCACCTCTGATCAGCCG +
Preference number: 6 (lower is better)
Translates to: PTGEQRGIVVWP*IIIPGCTSDQP
Trigger: CGGCTGATCAGAGGTGCAACCAGGGATGATGATTCAGGGCCATACAACTATTCCTCGTTGCTCGCCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS TCA 72 bp CATAGCTTACTGCAGCCTCCAACTGTTGGGCTCAAGTaGGCCTCCTCCTCAGTCTCCCAAGTGGCCAAGACT +
Preference number: 6 (lower is better)
Translates to: HSLLQPPTVGLK*ASSSVSQVAKT
Trigger: AGTCTTGGCCACTTGGGAGACTGAGGAGGAGGCTCACTTGAGCCCAACAGTTGGAGGCTGCAGTAAGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512393.1
CDS CCA 72 bp GTTGTTTCTCTGTTTCTGTGCAGCAAGCTGAGCTACTaGAGCACTGGGGGCTCTCACACACCTGGGAGACCT +
Preference number: 6 (lower is better)
Translates to: VVSLFLCSKLSY*STGGSHTPGRP
Trigger: AGGTCTCCCAGGTGTGTGAGAGCCCCCAGTGCTCCAGTAGCTCAGCTTGCTGCACAGAAACAGAGAAACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS TCA 72 bp TGTATGGCCCTGAATCATCATCCCTGGTTGCACCTCTaGTCAGCCGTCGCCAGTGATATCTGGCCCATTGGA +
Preference number: 6 (lower is better)
Translates to: CMALNHHPWLHL*SAVASDIWPIG
Trigger: TCCAATGGGCCAGATATCACTGGCGACGGCTGATCAGAGGTGCAACCAGGGATGATGATTCAGGGCCATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS TCA 72 bp ATCACCGTGTTGTTTCTCTGTTTCTGTGCAGCAAGCTaGGCTACTGGAGCACTGGGGGCTCTCACACACCTG +
Preference number: 6 (lower is better)
Translates to: ITVLFLCFCAAS*ATGALGALTHL
Trigger: CAGGTGTGTGAGAGCCCCCAGTGCTCCAGTAGCTCAGCTTGCTGCACAGAAACAGAGAAACAACACGGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS CCA 72 bp GCTCCGGAGAACTTCTCATACTCATCCTTGAAGGGCTaGATGTGGGGAACAACAATCCGGTGCCTTCCTGAC +
Preference number: 6 (lower is better)
Translates to: APENFSYSSLKG*MWGTTIRCLPD
Trigger: GTCAGGAAGGCACCGGATTGTTGTTCCCCACATCCAGCCCTTCAAGGATGAGTATGAGAAGTTCTCCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS TCA 72 bp TCACATAGGCTCCGGAGAACTTCTCATACTCATCCTTaGAGGGCTGGATGTGGGGAACAACAATCCGGTGCC +
Preference number: 6 (lower is better)
Translates to: SHRLRRTSHTHP*RAGCGEQQSGA
Trigger: GGCACCGGATTGTTGTTCCCCACATCCAGCCCTTCAAGGATGAGTATGAGAAGTTCTCCGGAGCCTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS TCA 72 bp GCTCTCACACACCTGGGAGACCTCTTCCTCCACAGGTaGAGCTGGTTTCATTCGACTAAAGAGAGGGAGTCT +
Preference number: 6 (lower is better)
Translates to: ALTHLGDLFLHR*SWFHSTKERES
Trigger: AGACTCCCTCTCTTTAGTCGAATGAAACCAGCTTCACCTGTGGAGGAAGAGGTCTCCCAGGTGTGTGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS CCA 72 bp CTGCACCTGGTCAAACTCTTGCTTTCAATGACCAGATaGAGGAGAACGATGAACAGAGCGGCTGTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: LHLVKLLLSMTR*RRTMNRAAVFR
Trigger: CCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTCATTGAAAGCAAGAGTTTGACCAGGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512393.1
CDS CAA 90 bp GGATCAGTGGAAAAGAGTAGTACCATGTCTGCAGGGATGACCTCGTaGCAGGAGAGGCGAATAAAGTCCCCAACAGTAACGTCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: GSVEKSSTMSAGMTS*QERRIKSPTVTSFQ
Trigger: CTGGAAAGACGTTACTGTTGGGGACTTTATTCGCCTCTCCTGCAACGAGGTCATCCCTGCAGACATGGTACTACTCTTTTCCACTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000504445.1
CDS GCA 72 bp ATTATGAACTGTCCTGCAGCTGGGGGCTCTCGGTTTTaGCATATTGCTGAGGGAACCACTGACTGTGTCTAT +
Preference number: 6 (lower is better)
Translates to: IMNCPAAGGSRF*HIAEGTTDCVY
Trigger: ATAGACACAGTCAGTGGTTCCCTCAGCAATATGGCAAAACCGAGAGCCCCCAGCTGCAGGACAGTTCATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000503288.6
ENST00000504445.1
CDS CAA 72 bp AAAGAGCTAAGCACAAATTCGAAGAGTGAAAGCGGGTaGTGCTTCCACGCCAGCCATTTGCCTTCCGGGAAA +
Preference number: 6 (lower is better)
Translates to: KELSTNSKSESG*CFHASHLPSGK
Trigger: TTTCCCGGAAGGCAAATGGCTGGCGTGGAAGCACAACCCGCTTTCACTCTTCGAATTTGTGCTTAGCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS CAA 72 bp AAGGACCACCACCAGAGGCAACATGGTGATTTCCTTTaGGAAGGCTTCTACCAAAGGTACCCAGTTCAGGAC +
Preference number: 6 (lower is better)
Translates to: KDHHQRQHGDFL*EGFYQRYPVQD
Trigger: GTCCTGAACTGGGTACCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCATGTTGCCTCTGGTGGTGGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000504445.1
CDS TCA 72 bp AGGTACAAGAAAAGAGCTAAGCACAAATTCGAAGAGTaGAAGCGGGTTGTGCTTCCACGCCAGCCATTTGCC +
Preference number: 6 (lower is better)
Translates to: RYKKRAKHKFEE*KRVVLPRQPFA
Trigger: GGCAAATGGCTGGCGTGGAAGCACAACCCGCTTTCACTCTTCGAATTTGTGCTTAGCTCTTTTCTTGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS CCA 72 bp GAGAACTTCTCATACTCATCCTTGAAGGGCTGGATGTaGGGAACAACAATCCGGTGCCTTCCTGACAGTTTA +
Preference number: 6 (lower is better)
Translates to: ENFSYSSLKGWM*GTTIRCLPDSL
Trigger: TAAACTGTCAGGAAGGCACCGGATTGTTGTTCCCCACATCCAGCCCTTCAAGGATGAGTATGAGAAGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS CCA 72 bp TCGACTAAAGAGAGGGAGTCTGCTCACAAAGGCGTTTaGAACTCCAGAAGATGGCTCTTTCCCACTGTTAAG +
Preference number: 6 (lower is better)
Translates to: STKERESAHKGV*NSRRWLFPTVK
Trigger: CTTAACAGTGGGAAAGAGCCATCTTCTGGAGTTCCAAACGCCTTTGTGAGCAGACTCCCTCTCTTTAGTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS TCA 72 bp ACTCTAGTCATGCATTCATACTTACAATGGGGCTACTaGAAGCAGCCTGTCTGGAATGAGGCACTTCACTGG +
Preference number: 6 (lower is better)
Translates to: TLVMHSYLQWGY*KQPVWNEALHW
Trigger: CCAGTGAAGTGCCTCATTCCAGACAGGCTGCTTTCAGTAGCCCCATTGTAAGTATGAATGCATGACTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS GCA 72 bp ACTTCAGAGTCCTGTTCTGCATATCCCCGAACCACCTaGCTCTGTTTTAAATTGCTCTCTCCATCAAGACCA +
Preference number: 6 (lower is better)
Translates to: TSESCSAYPRTT*LCFKLLSPSRP
Trigger: TGGTCTTGATGGAGAGAGCAATTTAAAACAGAGGCAGGTGGTTCGGGGATATGCAGAACAGGACTCTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000504445.1
CDS TCA 72 bp AGATGGCTCTTTCCCACTGTTAAGCGATGGAGAACTTaGTCTTCGGACAGACCATCTCTGGAAAAGACTTTT +
Preference number: 6 (lower is better)
Translates to: RWLFPTVKRWRT*SSDRPSLEKTF
Trigger: AAAAGTCTTTTCCAGAGATGGTCTGTCCGAAGATCAAGTTCTCCATCGCTTAACAGTGGGAAAGAGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS CAA 72 bp GAATGTTCTAGGAAGCCTCGGAATCTGCTGAGGTCATaGTTTGGGCTTTCACATTCTATCCTACTGGAAAAC +
Preference number: 6 (lower is better)
Translates to: ECSRKPRNLLRS*FGLSHSILLEN
Trigger: GTTTTCCAGTAGGATAGAATGTGAAAGCCCAAACAATGACCTCAGCAGATTCCGAGGCTTCCTAGAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000504445.1
CDS CAA 90 bp TCTTTGTTGGAATGTTCTAGGAAGCCTCGGAATCTGCTGAGGTCATaGTTTGGGCTTTCACATTCTATCCTACTGGAAAACTTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: SLLECSRKPRNLLRS*FGLSHSILLENFSG
Trigger: TCCTGAGAAGTTTTCCAGTAGGATAGAATGTGAAAGCCCAAACAATGACCTCAGCAGATTCCGAGGCTTCCTAGAACATTCCAACAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000504445.1
CDS CAA 72 bp TGTCGGGGTTGGTTAGGAGCAGAAACCACTACTGTGTaGCAAATTGCCAATGCAATGAAAAAGTCGATAATG +
Preference number: 6 (lower is better)
Translates to: CRGWLGAETTTV*QIANAMKKSIM
Trigger: CATTATCGACTTTTTCATTGCATTGGCAATTTGCAACACAGTAGTGGTTTCTGCTCCTAACCAACCCCGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273859.8
CDS TCA 72 bp CATGGTCCAAAACATATAAAATCCTGCCAACAGTGGTaGTATGATATGTCCATCAGGCTCGGGAACATTGAA +
Preference number: 6 (lower is better)
Translates to: HGPKHIKSCQQW*YDMSIRLGNIE
Trigger: TTCAATGTTCCCGAGCCTGATGGACATATCATATCACCACTGTTGGCAGGATTTTATATGTTTTGGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000504445.1
CDS GCA 72 bp TTTGTATTTCCGATAATCTTCCAGGCCATCTTTAATTaGGATAATTGTAAGGACCACCACCAGAGGCAACAT +
Preference number: 6 (lower is better)
Translates to: FVFPIIFQAIFN*DNCKDHHQRQH
Trigger: ATGTTGCCTCTGGTGGTGGTCCTTACAATTATCGCAATTAAAGATGGCCTGGAAGATTATCGGAAATACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273859.8
ENST00000504445.1
CDS GCA 72 bp ATTACAAGGCTGTTCTCTCATCATACATTGTGGATGTaGAAGACTCTAGTCATGCATTCATACTTACAATGG +
Preference number: 6 (lower is better)
Translates to: ITRLFSHHTLWM*KTLVMHSYLQW
Trigger: CCATTGTAAGTATGAATGCATGACTAGAGTCTTGCACATCCACAATGTATGATGAGAGAACAGCCTTGTAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS CAA 72 bp AATTTCTTGGCACAAAATTCAGAAGTGTGTACTTTGTaGTTCGTATTCGATTGTTCACATAGGCTCCGGAGA +
Preference number: 6 (lower is better)
Translates to: NFLAQNSEVCTL*FVFDCSHRLRR
Trigger: TCTCCGGAGCCTATGTGAACAATCGAATACGAACAACAAAGTACACACTTCTGAATTTTGTGCCAAGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273859.8
ENST00000504445.1
ENST00000507889.1
CDS CAA 90 bp GAGTTTGACTCTATCATAATTACAAGGCTGTTCTCTCATCATACATaGTGGATGTGCAAGACTCTAGTCATGCATTCATACTTACAATGG +
Preference number: 6 (lower is better)
Translates to: EFDSIIITRLFSHHT*WMCKTLVMHSYLQW
Trigger: CCATTGTAAGTATGAATGCATGACTAGAGTCTTGCACATCCACAATGTATGATGAGAGAACAGCCTTGTAATTATGATAGAGTCAAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504445.1
CDS GCA 72 bp AGGAGCAGAAACCACTACTGTGTTGCAAATTGCCAATaGAATGAAAAAGTCGATAATGTACAAAGTTTCCAT +
Preference number: 6 (lower is better)
Translates to: RSRNHYCVANCQ*NEKVDNVQSFH
Trigger: ATGGAAACTTTGTACATTATCGACTTTTTCATTGCATTGGCAATTTGCAACACAGTAGTGGTTTCTGCTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273859.8